BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14886
(505 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383850888|ref|XP_003701006.1| PREDICTED: contactin-like [Megachile rotundata]
Length = 1650
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/484 (69%), Positives = 398/484 (82%), Gaps = 3/484 (0%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MDN+ +LTWTCEAFG+PDVTYSWFRNGELLN +TLP+ED++RYFIQDNVLTI+ L+PERD
Sbjct: 504 MDNRGELTWTCEAFGIPDVTYSWFRNGELLNVDTLPIEDRERYFIQDNVLTIKNLDPERD 563
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
AMYQCRA+NQLKT+YSSAQLRVL+LKPSFKKRP+E ETYA E GNVTIFCNPEAAPKPK
Sbjct: 564 QAMYQCRARNQLKTKYSSAQLRVLSLKPSFKKRPMEPETYAAERGNVTIFCNPEAAPKPK 623
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
FVWKKDGNIIGSGGRR+I E GNL+ISPVS DD G Y C+ATN +G DE++GRLIVL P
Sbjct: 624 FVWKKDGNIIGSGGRRRILEGGNLIISPVSSDDEGTYVCSATNQYGSDETRGRLIVLRRP 683
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E+LP +IT A +N LRC +E+LDVAYIW HNG+RI + DL P + IDG
Sbjct: 684 YFLEKLPQRITTAVMQNQTLRCIGEVDEMLDVAYIWKHNGLRIRDEDL--ASNPRLRIDG 741
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA+FA+AG+YEC++KS VG+IS+ TTV++EGPPG PGGVQVV + KTS T++WT
Sbjct: 742 GELNIINATFAEAGDYECIIKSAVGEISSTTTVMIEGPPGPPGGVQVVNIVKTSTTLRWT 801
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
DGA NGRPIT Y + ARTNWN TWFNV E++ EVDRY GRKEA +ENVL P++TYEF
Sbjct: 802 DGAFNGRPITMYTVSARTNWNHTWFNVIENITAIEVDRYNGRKEAYLENVLNPYTTYEFC 861
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A NELGY PS+PSPQY+TP+DKPY+ PS IGGGGGKIGDL+I+W PLP +QN P I
Sbjct: 862 VSAFNELGYSVPSAPSPQYSTPSDKPYKIPSNIGGGGGKIGDLTIAWNPLPPSEQNGPGI 921
Query: 421 YYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
YYK+FWR+K ++ EFQS +LK GN+G +VV I ++YYTEYEVKVQAIN +G GP S
Sbjct: 922 YYKVFWRRKYHEKEFQSLSLKGQGNIGRSVVAIQPQYYYTEYEVKVQAINSLGSGPVSNE 981
Query: 480 VTIW 483
VTI+
Sbjct: 982 VTIF 985
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 124/318 (38%), Gaps = 42/318 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++ +C A G P TY WF+ N L+ ++ PL D RY + L I + D
Sbjct: 215 DISLSCLAGGYPAPTYEWFKEDYENDRLIATKINPL-DNARYTVSGGTLIIYEPDQTEDR 273
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C+A N+ T S S +L + KR SE + ++C+ P+ P
Sbjct: 274 GAYHCKATNKFGTIISESVELSFGYILEFNLKR---SEERGDQKWGKAVYCDPPQHFPGV 330
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR---- 173
K+ W +D N + R + +G L S + D G YSC NV + GR
Sbjct: 331 KYYWARDYFPNFVEEDKRVFVSHDGALYFSVLEMIDRGNYSC---NVQSVASDTGRNGPF 387
Query: 174 ----------LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L P+ + + P+ IA ++L C A + ++ WT G
Sbjct: 388 FPLRVDPHSSFQQLKFPNNFPKAFPQAPIAGEE-VRLECIAFGYPV--PSFNWTRRG--- 441
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283
G++ T +L I D GEY C + I T+ ++ P
Sbjct: 442 GSLPRGSYTTSY----NRVLIIPKVHVDDQGEYICRAHNDRLSIENSVTLTIQAAPNFT- 496
Query: 284 GVQVVEVHKTS-ATIQWT 300
+ +V+ H + + WT
Sbjct: 497 -IPLVDKHMDNRGELTWT 513
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 183/502 (36%), Gaps = 52/502 (10%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++T C P + W ++G ++ S R ++ L I ++ + D
Sbjct: 607 RGNVTIFCNPEAAPKPKFVWKKDGNIIGS------GGRRRILEGGNLIISPVSSD-DEGT 659
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y C A NQ + + +L VL +K P T + + + ++W
Sbjct: 660 YVCSATNQYGSDETRGRLIVLRRPYFLEKLPQRITTAVMQNQTLRCIGEVDEMLDVAYIW 719
Query: 124 KKDG-----NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
K +G + S R +I + G L I + ++G Y C + G S +++
Sbjct: 720 KHNGLRIRDEDLASNPRLRI-DGGELNIINATFAEAGDYECIIKSAVGEISSTTTVMIEG 778
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-----WTHNGVR-IGNMDLNELE 232
P + + L+ A + + + W H I N+ E++
Sbjct: 779 PPGPPGGVQVVNIVKTSTTLRWTDGAFNGRPITMYTVSARTNWNHTWFNVIENITAIEVD 838
Query: 233 TPNINIDGGLLEITN---------ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283
N + L + N ++F + G S S + + + P +P
Sbjct: 839 RYNGRKEAYLENVLNPYTTYEFCVSAFNELG------YSVPSAPSPQYSTPSDKPYKIPS 892
Query: 284 GVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 340
+ TI W NG P +YK+ R ++ F + +
Sbjct: 893 NIGGGGGKIGDLTIAWNPLPPSEQNG-PGIYYKVFWRRKYHEKEF----QSLSLKGQGNI 947
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
GR +I+ ++ YE KV A N LG G P S + D P AP ++
Sbjct: 948 GRSVVAIQPQYY-YTEYEVKVQAINSLGSG-PVSNEVTIFSAEDMPQVAPQQVVAHSYNS 1005
Query: 401 GDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRI-PSEF 456
L +SW P+ REK I ++I +W++ N E L VV + P +
Sbjct: 1006 TSLKVSWSPIEQTREKVRGKLIGHRIKYWKESNREEDAVYYLSRSTQPWALVVGLQPDTY 1065
Query: 457 YYTEYEVKVQAINDVGPGPESE 478
YY VKV A N G GPESE
Sbjct: 1066 YY----VKVMAYNSAGEGPESE 1083
>gi|340724306|ref|XP_003400523.1| PREDICTED: contactin-like [Bombus terrestris]
Length = 1642
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/485 (67%), Positives = 400/485 (82%), Gaps = 4/485 (0%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MDN+ +LTWTCEAFG+PDV+YSWFRNGE+LN ETLP +D+DRY IQDNVL+I+YL+PERD
Sbjct: 503 MDNRGELTWTCEAFGIPDVSYSWFRNGEILNMETLPSQDRDRYSIQDNVLSIKYLDPERD 562
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
AMYQCRA+NQLKT+YSSAQLR+L+LKPSFKKRP+E ETYA E GNVTIFCNPEAAP+PK
Sbjct: 563 QAMYQCRARNQLKTKYSSAQLRILSLKPSFKKRPMEPETYAAEKGNVTIFCNPEAAPRPK 622
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
FVWKKDGN+IGSGGRRKI E GNL+ISPVSRDD G Y CTATN +G D+++GRLIVL GP
Sbjct: 623 FVWKKDGNVIGSGGRRKILETGNLIISPVSRDDEGTYICTATNQYGSDDTRGRLIVLRGP 682
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
+ E+LP +T A +N LRC +E+LDVAYIW HNG+RI + DL + P ++ID
Sbjct: 683 QFIEKLPQHVTSAVMQNQTLRCMGEVVDEMLDVAYIWKHNGLRIRDEDL--INNPRLHID 740
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA+FA+AGEY+C++KS VG+IS+KTTV +EGPPG PGGVQVV + KTS T++W
Sbjct: 741 GEELNIINATFAEAGEYQCIIKSAVGEISSKTTVTIEGPPGPPGGVQVVNIVKTSTTLRW 800
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
TDGA NG+PIT Y + ARTNWN TW N+ E++ EVDRY GRKEA +ENVL P++TYEF
Sbjct: 801 TDGAFNGKPITMYTVSARTNWNHTWSNIIENITAVEVDRYNGRKEAYLENVLNPYTTYEF 860
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
V A NELGY PSSPSPQY+TP+DKP + PS IGGGGGKIGDL+I+W+PLP +QN P
Sbjct: 861 CVSAFNELGYSLPSSPSPQYSTPSDKPTKVPSNIGGGGGKIGDLTITWDPLPSSEQNGPG 920
Query: 420 IYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
IYYK+FWR+K ++TEFQS +LK+YGN G +VV+I ++YYTEYEVKVQA N +G GP S
Sbjct: 921 IYYKVFWRQKYHETEFQSLSLKDYGNAGRSVVQIQQQYYYTEYEVKVQAANALGFGPISN 980
Query: 479 VVTIW 483
VTI+
Sbjct: 981 AVTIF 985
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 126/327 (38%), Gaps = 60/327 (18%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+ +C A G P TY WF+ N L+ ++ PL + +RY + L I + D
Sbjct: 214 DVALSCLAGGYPAPTYEWFKEDYENDRLIATKIDPL-NNNRYTVSGGTLIIYEPDQAEDR 272
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C+A N+ T S S +L + KR SE + ++C+ P+ P
Sbjct: 273 GSYHCKATNKFGTIISESVELSFGYILEFNLKR---SEERGEQNWGKVVYCDPPQHFPGV 329
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
K+ W +D N + R + +G L S + D G YSC NV + GR
Sbjct: 330 KYYWARDYFPNFVEEDKRVFVSHDGALYFSALEMIDRGNYSC---NVQSVASDTGR---- 382
Query: 178 HGP---------SYYEQLP---------PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+GP S ++QL P IA ++L C A + +Y WT
Sbjct: 383 NGPFFPLRVDPHSSFQQLKFSDNFPKAFPDAPIAGVE-VRLECVAFGYPI--PSYNWTRR 439
Query: 220 GVRIGNMDLNE-----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
G + L P +++D D GEY C V + I +
Sbjct: 440 GASLPRGSYTTSYNRVLIIPKVHVD------------DQGEYTCRVYNDRSAIENSVRLT 487
Query: 275 VEGPPGLPGGVQVVEVHKTS-ATIQWT 300
++ P + +V+ H + + WT
Sbjct: 488 IQAAPNFT--IPLVDKHMDNRGELTWT 512
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWF-NVSEHV 331
+ P +P + TI W NG P +YK+ R ++ T F ++S
Sbjct: 885 DKPTKVPSNIGGGGGKIGDLTITWDPLPSSEQNG-PGIYYKVFWRQKYHETEFQSLSLKD 943
Query: 332 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
G GR I+ ++ YE KV A N LG+G P S + + D P AP
Sbjct: 944 YGN-----AGRSVVQIQQQYY-YTEYEVKVQAANALGFG-PISNAVTIFSAEDMPQVAPQ 996
Query: 392 RIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIA 448
++ G L +SW P+ RE+ I ++I +W++ N E L
Sbjct: 997 QVIAHGYNSTSLKVSWLPIEQTRERIRGKLIGHRIKYWKESNKEEDAVYYLSRSARPWAL 1056
Query: 449 VVRI-PSEFYYTEYEVKVQAINDVGPGPESE 478
VV + P +YY VKV A N G GPESE
Sbjct: 1057 VVGLQPDTYYY----VKVMAYNSAGEGPESE 1083
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 123/299 (41%), Gaps = 35/299 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C AFG P +Y+W R G +LP + + VL I ++ + D Y CR N
Sbjct: 424 CVAFGYPIPSYNWTRRG-----ASLPRGSYTTSY--NRVLIIPKVHVD-DQGEYTCRVYN 475
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S +L + P+F PL + + G +T C P + W ++G I+
Sbjct: 476 DRSAIENSVRL-TIQAAPNFTI-PL-VDKHMDNRGELTWTCEAFGIPDVSYSWFRNGEIL 532
Query: 131 G-----SGGRRKIFENGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GP 180
S R + N+L + P D +Y C A N S +L +L P
Sbjct: 533 NMETLPSQDRDRYSIQDNVLSIKYLDP--ERDQAMYQCRARNQLKTKYSSAQLRILSLKP 590
Query: 181 SYYEQ-LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
S+ ++ + P+ A N+ + C+ E ++W +G IG+ ++ ++
Sbjct: 591 SFKKRPMEPETYAAEKGNVTIFCNP--EAAPRPKFVWKKDGNVIGSGGRRKI------LE 642
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L I+ S D G Y C + G T+ +IV P ++ + H TSA +Q
Sbjct: 643 TGNLIISPVSRDDEGTYICTATNQYGSDDTRGRLIVLRGPQF---IEKLPQHVTSAVMQ 698
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 6/180 (3%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G V + C P P + W + G + G + N L+I V DD G Y+C N
Sbjct: 417 GVEVRLECVAFGYPIPSYNWTRRGASLPRGSYTTSY-NRVLIIPKVHVDDQGEYTCRVYN 475
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
E+ RL + P++ L K + L C A + DV+Y W NG +
Sbjct: 476 DRSAIENSVRLTIQAAPNFTIPLVDK-HMDNRGELTWTCEAFG--IPDVSYSWFRNGEIL 532
Query: 224 GNMDLNELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVG-KISTKTTVIVEGPPGL 281
L + +I +L I D Y+C ++ + K S+ I+ P
Sbjct: 533 NMETLPSQDRDRYSIQDNVLSIKYLDPERDQAMYQCRARNQLKTKYSSAQLRILSLKPSF 592
>gi|350420740|ref|XP_003492608.1| PREDICTED: contactin-like [Bombus impatiens]
Length = 1813
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/485 (67%), Positives = 399/485 (82%), Gaps = 4/485 (0%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MDN+ +LTWTCEAFG+PDV+YSWFRNGE+LN ETLP +D+DRY IQDNVL+I+YL+PERD
Sbjct: 503 MDNRGELTWTCEAFGIPDVSYSWFRNGEMLNMETLPSQDRDRYSIQDNVLSIKYLDPERD 562
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
AMYQCRA+NQLKT+YSSAQLR+L+LKPSFKKRP+E ETYA E GNVTIFCNPEAAP+PK
Sbjct: 563 QAMYQCRARNQLKTKYSSAQLRILSLKPSFKKRPMEPETYAAEKGNVTIFCNPEAAPRPK 622
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
FVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y CTATN +G D+++GRLIVL GP
Sbjct: 623 FVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYICTATNQYGSDDTRGRLIVLRGP 682
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
+ E+LP +T A +N LRC +E+LDVAYIW HNG+RI + DL + P ++ID
Sbjct: 683 QFIEKLPQHVTSAVMQNQTLRCMGEVVDEMLDVAYIWKHNGLRIRDEDL--INNPRLHID 740
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA+FA+AGEY+C++KS VG+IS+KTTV +EGPPG PGGVQVV + KTS T++W
Sbjct: 741 GEELNIINATFAEAGEYQCIIKSAVGEISSKTTVTIEGPPGPPGGVQVVNIVKTSTTLRW 800
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
TDGA NG+PIT Y + ARTNWN TW N+ E++ EVDRY GRKEA +ENVL P++TYEF
Sbjct: 801 TDGAFNGKPITMYTVSARTNWNHTWSNIIENITAVEVDRYNGRKEAYLENVLNPYTTYEF 860
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
V A NELGY PSSPSPQY+TP DKP + PS IGGGGGKIGDL+I+W+PLP +QN P
Sbjct: 861 CVSAFNELGYSLPSSPSPQYSTPPDKPTKVPSNIGGGGGKIGDLTITWDPLPSSEQNGPG 920
Query: 420 IYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
IYYK+FWR+K ++TEFQS +LK+YGN G +VV+I ++YYTEYEVKVQA N +G GP S
Sbjct: 921 IYYKVFWRQKYHETEFQSLSLKDYGNAGRSVVQIQQQYYYTEYEVKVQAANALGFGPISN 980
Query: 479 VVTIW 483
VTI+
Sbjct: 981 AVTIF 985
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 122/320 (38%), Gaps = 46/320 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+ +C A G P TY WF+ N L+ ++ PL + +RY I L I + D
Sbjct: 214 DVALSCLAGGYPAPTYEWFKEDYENDRLIATKIDPL-NNNRYTISGGTLIIYEPDQTEDR 272
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C+A N+ T S S +L + KR SE + ++C+ P+ P
Sbjct: 273 GSYHCKATNKFGTIISESVELSFGYILEFNLKR---SEERGEQNWGKVVYCDPPQHFPGV 329
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
K+ W +D N + R + +G L S + D G YSC +V G L
Sbjct: 330 KYYWARDYFPNFVEEDKRVFVSHDGALYFSALEMIDRGNYSCNVQSVASDTGRNGPFFPL 389
Query: 178 HGPSY--YEQLP---------PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
S+ ++QL P IA ++L C A + +Y WT G +
Sbjct: 390 RVDSHSSFQQLKFSGNFPKAFPDAPIAGEE-VRLECVAFGYPI--PSYNWTRRGASLPRG 446
Query: 227 DLNE-----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
L P +++D D GEY C V + I + ++ P
Sbjct: 447 SYTTSYNRVLIIPKVHVD------------DQGEYTCRVYNDRSAIENSVRLTIQAAPNF 494
Query: 282 PGGVQVVEVH-KTSATIQWT 300
+ +V+ H + WT
Sbjct: 495 T--IPLVDKHMDNRGELTWT 512
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWF-NVSEHV 331
+ P +P + TI W NG P +YK+ R ++ T F ++S
Sbjct: 885 DKPTKVPSNIGGGGGKIGDLTITWDPLPSSEQNG-PGIYYKVFWRQKYHETEFQSLSLKD 943
Query: 332 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
G GR I+ ++ YE KV A N LG+G P S + + D P AP
Sbjct: 944 YGN-----AGRSVVQIQQQYY-YTEYEVKVQAANALGFG-PISNAVTIFSAEDMPQVAPQ 996
Query: 392 RIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIA 448
++ G L +SW P+ RE+ I ++I +W++ N E L
Sbjct: 997 QVVAHGYNSTSLKVSWLPIEQTRERIRGKLIGHRIKYWKESNKEEDAVYYLSRSARPWAL 1056
Query: 449 VVRI-PSEFYYTEYEVKVQAINDVGPGPESE 478
VV + P +YY VKV A N G GPESE
Sbjct: 1057 VVGLQPDTYYY----VKVMAYNSAGEGPESE 1083
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 122/299 (40%), Gaps = 35/299 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C AFG P +Y+W R G +LP + + VL I ++ + D Y CR N
Sbjct: 424 CVAFGYPIPSYNWTRRG-----ASLPRGSYTTSY--NRVLIIPKVHVD-DQGEYTCRVYN 475
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S +L + P+F PL + + G +T C P + W ++G ++
Sbjct: 476 DRSAIENSVRL-TIQAAPNFTI-PL-VDKHMDNRGELTWTCEAFGIPDVSYSWFRNGEML 532
Query: 131 G-----SGGRRKIFENGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GP 180
S R + N+L + P D +Y C A N S +L +L P
Sbjct: 533 NMETLPSQDRDRYSIQDNVLSIKYLDP--ERDQAMYQCRARNQLKTKYSSAQLRILSLKP 590
Query: 181 SYYEQ-LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
S+ ++ + P+ A N+ + C+ E ++W +G IG+ + ++
Sbjct: 591 SFKKRPMEPETYAAEKGNVTIFCNP--EAAPRPKFVWKKDGNVIGSGGRRRI------LE 642
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L I+ S D G Y C + G T+ +IV P ++ + H TSA +Q
Sbjct: 643 TGNLIISPVSRDDEGTYICTATNQYGSDDTRGRLIVLRGPQF---IEKLPQHVTSAVMQ 698
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 6/180 (3%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G V + C P P + W + G + G + N L+I V DD G Y+C N
Sbjct: 417 GEEVRLECVAFGYPIPSYNWTRRGASLPRGSYTTSY-NRVLIIPKVHVDDQGEYTCRVYN 475
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
E+ RL + P++ L K + L C A + DV+Y W NG +
Sbjct: 476 DRSAIENSVRLTIQAAPNFTIPLVDK-HMDNRGELTWTCEAFG--IPDVSYSWFRNGEML 532
Query: 224 GNMDLNELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVG-KISTKTTVIVEGPPGL 281
L + +I +L I D Y+C ++ + K S+ I+ P
Sbjct: 533 NMETLPSQDRDRYSIQDNVLSIKYLDPERDQAMYQCRARNQLKTKYSSAQLRILSLKPSF 592
>gi|332023779|gb|EGI64003.1| Contactin [Acromyrmex echinatior]
Length = 1220
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/484 (65%), Positives = 393/484 (81%), Gaps = 5/484 (1%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MD+ ADLTWTCEAFG+PDVTYSWF+NG+LL+S L LE++DRY IQDNVL I +++ E+D
Sbjct: 501 MDDHADLTWTCEAFGIPDVTYSWFKNGKLLDS--LSLEERDRYTIQDNVLNIHHVDSEKD 558
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+NQL+T YSSAQLRVL+LKPSFKKRP+ESETYA EGGNVTI CNPEAAP+PK
Sbjct: 559 QGMYQCCARNQLRTTYSSAQLRVLSLKPSFKKRPMESETYAAEGGNVTIMCNPEAAPRPK 618
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+WKKDGNIIGSGGRR+I E GNL+ISPVSRDD G Y CTATN +G DE++GRLIVL GP
Sbjct: 619 FIWKKDGNIIGSGGRRRILETGNLIISPVSRDDEGTYVCTATNQYGNDETRGRLIVLRGP 678
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ ++LP +I + + NL L C H +E+LD+AYIWTHNG+RI + DL P +NIDG
Sbjct: 679 QFVQRLPSQIILYYNNNLTLHCLGHIDEMLDIAYIWTHNGMRIRDKDLQ--NNPRLNIDG 736
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I NA+F +AGEYEC++KS VG IS+K +IV+GPPG PGGVQV+ + KTSAT++W+
Sbjct: 737 EYLNIINATFTEAGEYECILKSAVGAISSKLNLIVQGPPGPPGGVQVMNIFKTSATLRWS 796
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
DGA NG+PIT Y I ART+WN TWF++ E++ E DRY GRKEA++ENVL P+STYEF+
Sbjct: 797 DGAMNGKPITMYTISARTDWNQTWFSLVENITAFEADRYNGRKEANLENVLNPYSTYEFR 856
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A NE GYG PS PSP+Y+TP+DKP +APS I GGGGKIGDL+I+W+PL QN P +
Sbjct: 857 VLAFNEFGYGPPSLPSPRYSTPSDKPAKAPSNISGGGGKIGDLTITWDPLNPSDQNGPGV 916
Query: 421 YYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
YYKIFWR+K + EFQS +L+EYGN+G +VV IP ++YYTEYEVKVQAIN +G GP S +
Sbjct: 917 YYKIFWRRKGYEKEFQSLSLQEYGNIGSSVVPIPQQYYYTEYEVKVQAINAMGEGPVSNI 976
Query: 480 VTIW 483
T++
Sbjct: 977 ETVY 980
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 140/359 (38%), Gaps = 52/359 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++ +C A G P TY WFR N L+ + PL D+ ++ + L I N + D
Sbjct: 212 DVSLSCLAGGYPTPTYEWFRETYVNDLLVAIKIDPLVDR-KFTVSGGTLIIYDPNSKIDS 270
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
+Y C+A N+ T S SA+L + KR SE ++C+ P+ P
Sbjct: 271 GLYHCKATNKFGTIISESAELSFGFINEFNLKR---SEERGDNHWGKVMYCDPPQHFPDV 327
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD--------- 168
+ W ++ N + R + +G L S + D G YSC N+ D
Sbjct: 328 SYYWVREYFPNFVEEDKRVFVSHDGALYFSALETIDRGNYSCYVQNI-AFDIGRNGPFFP 386
Query: 169 ---ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ L P+ + + P+ IA ++L C A + +Y WT G +
Sbjct: 387 LKVDMHSSFQQLKFPNNFPKAFPEAPIAGE-TVRLECIAFGYPV--PSYNWTKRGSILPR 443
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
T N N +L + D GEY C V + I + ++ P +
Sbjct: 444 GAY----TANFN---RVLILPRVHVEDQGEYVCRVYNDRLSIENSVQLTIQATPNF--TI 494
Query: 286 QVVEVHKTS-ATIQWTDGATNGRPITHYKIIARTNWNSTWF---NVSEHVIGKEVDRYT 340
+V+ H A + WT A +T+ +WF + + + +E DRYT
Sbjct: 495 PLVDKHMDDHADLTWTCEAFGIPDVTY-----------SWFKNGKLLDSLSLEERDRYT 542
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 114/514 (22%), Positives = 193/514 (37%), Gaps = 78/514 (15%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++T C P + W ++G ++ S R ++ L I ++ + D Y
Sbjct: 603 GNVTIMCNPEAAPRPKFIWKKDGNIIGS------GGRRRILETGNLIISPVSRD-DEGTY 655
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC--NPEAAPKPKFV 122
C A NQ + +L VL P F +R L S+ N+T+ C + + ++
Sbjct: 656 VCTATNQYGNDETRGRLIVLR-GPQFVQR-LPSQIILYYNNNLTLHCLGHIDEMLDIAYI 713
Query: 123 WKKDGNIIGSGGRRKIFENGNLL--------ISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W +G I R K +N L I + ++G Y C + G SK L
Sbjct: 714 WTHNGMRI----RDKDLQNNPRLNIDGEYLNIINATFTEAGEYECILKSAVGAISSKLNL 769
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-----WTHNGVR-IGNMDL 228
IV P + L+ A + + + I W + N+
Sbjct: 770 IVQGPPGPPGGVQVMNIFKTSATLRWSDGAMNGKPITMYTISARTDWNQTWFSLVENITA 829
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVG---------KISTKTTVIVEGPP 279
E + N + L + N E+ + + G + ST + + P
Sbjct: 830 FEADRYNGRKEANLENVLNP--YSTYEFRVLAFNEFGYGPPSLPSPRYSTPSDKPAKAPS 887
Query: 280 GLPGGVQVVEVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG + TI W + + P +YKI W + KE
Sbjct: 888 NISGGGGKI----GDLTITWDPLNPSDQNGPGVYYKIF----WRRKGYE-------KEFQ 932
Query: 338 RYTGRKEASIENVLVP------WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
+ ++ +I + +VP ++ YE KV A N +G G S+ Y + D P AP
Sbjct: 933 SLSLQEYGNIGSSVVPIPQQYYYTEYEVKVQAINAMGEGPVSNIETVY-SAEDMPQAAPQ 991
Query: 392 RIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRK----KNDTEFQSETLKEYGN 444
+ L+++W+P+ RE+ I ++I +W+K ++ T + S T + +
Sbjct: 992 LVYSMSYNSTSLNVTWQPIEQTRERVRGKLIGHRIKYWQKTISEEDATYYLSRTTRPWS- 1050
Query: 445 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ V P +YY VKV A N G GPESE
Sbjct: 1051 --LVVGLQPDTYYY----VKVMAYNSAGEGPESE 1078
>gi|328787872|ref|XP_003251020.1| PREDICTED: contactin-like [Apis mellifera]
Length = 1641
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/484 (67%), Positives = 392/484 (80%), Gaps = 3/484 (0%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MDN+ +LTWTCEAFG+PDVTYSWFRNGE+LN ETL ED+DRY IQDNVL+I+ L+PERD
Sbjct: 503 MDNRGELTWTCEAFGIPDVTYSWFRNGEILNMETLSSEDKDRYSIQDNVLSIKNLDPERD 562
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
AMYQCRAKNQLKTRYSSAQLR+L+LKPSFKKRP+E ETYA E GN+TI CNPEAAP+PK
Sbjct: 563 QAMYQCRAKNQLKTRYSSAQLRILSLKPSFKKRPMEPETYAAEKGNITIICNPEAAPRPK 622
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
FVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y CTATN +G DE++GRLIVL GP
Sbjct: 623 FVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYICTATNQYGNDETRGRLIVLRGP 682
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E+LP +IT A +N LRC +E+LDVAYIW HNG+RI + DL + P +NI+G
Sbjct: 683 QFMEKLPQQITTAVMQNQTLRCIGEIDEMLDVAYIWKHNGLRIRDEDL--INNPRLNING 740
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I NA+FA+AGEYEC++KS V +IS+KT V +EGPPG PGGVQV + KTS T++WT
Sbjct: 741 EELNIINATFAEAGEYECIIKSAVSEISSKTIVTIEGPPGPPGGVQVKNIVKTSTTLRWT 800
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
DGA NG+PIT Y I ARTNWN TWF + E++ EVDRY GRKEA +ENVL P++TYEF+
Sbjct: 801 DGAFNGKPITMYSISARTNWNHTWFIIIENITAIEVDRYNGRKEAYLENVLNPYTTYEFR 860
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A NELGY PSSPSPQY+T DKP + P IGGGGGKIGDL+I+W PLP +QN P I
Sbjct: 861 VSAFNELGYSLPSSPSPQYSTSPDKPMKVPFNIGGGGGKIGDLTITWNPLPPSEQNGPGI 920
Query: 421 YYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
YYK+FWR+K ++TEFQS +LK YGNVG +VV I ++YYTEYEVKVQA+N +G GP S
Sbjct: 921 YYKVFWRRKYHETEFQSLSLKNYGNVGRSVVPIQQQYYYTEYEVKVQAVNALGSGPISNA 980
Query: 480 VTIW 483
VTI+
Sbjct: 981 VTIF 984
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 126/323 (39%), Gaps = 52/323 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++ +C A G P TY WF+ N +L+ ++ PL + RY + L I + D
Sbjct: 214 DVSLSCLAGGYPTPTYEWFKEDYENDKLIATKIDPLNNI-RYTVSGGTLIIYEPDQTEDR 272
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C+A N+ T S S +L + KR SE + ++C+ P+ P
Sbjct: 273 GSYHCKATNKFGTIISESVELSFGYILEFNLKR---SEERGDQNWGKAVYCDPPQHYPGV 329
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR---- 173
K+ W +D N + R + +G L S + D G YSC NV + GR
Sbjct: 330 KYYWARDYFPNFVEEDKRVFVSNDGALYFSALEMIDRGNYSC---NVQSVASDTGRNGPF 386
Query: 174 ----------LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L P+ + + P+ I A ++L C A + +Y WT G +
Sbjct: 387 FPLRVDPHSSFQQLKFPNNFPKAFPEAPI-AEEEVRLECIAFGYPV--PSYNWTRRGAPL 443
Query: 224 GNMDLNE-----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
L P I++D D GEY C V + I T+ ++
Sbjct: 444 PRGAYTTSYNRVLIIPKIHVD------------DQGEYICRVYNDRLSIENSVTLTIQAA 491
Query: 279 PGLPGGVQVVEVHKTS-ATIQWT 300
P + +V+ H + + WT
Sbjct: 492 PNF--TIPLVDKHMDNRGELTWT 512
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 26/214 (12%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWF-NVSEHV 331
+ P +P + TI W NG P +YK+ R ++ T F ++S
Sbjct: 884 DKPMKVPFNIGGGGGKIGDLTITWNPLPPSEQNG-PGIYYKVFWRRKYHETEFQSLSLKN 942
Query: 332 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
G GR I+ ++ YE KV A N LG G P S + + D P AP
Sbjct: 943 YGN-----VGRSVVPIQQQYY-YTEYEVKVQAVNALGSG-PISNAVTIFSAEDMPQVAPQ 995
Query: 392 RIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTE----FQSETLKEYGN 444
++ L +SW+P+ REK I ++I +W++ N E + S T + +
Sbjct: 996 QVVAQSYNSTSLKVSWKPIEETREKIRGKLIGHRIKYWKENNREENAVYYLSRTRRPWA- 1054
Query: 445 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ V P +YY VKV A N G GPESE
Sbjct: 1055 --LVVGLQPDTYYY----VKVMAYNSAGEGPESE 1082
>gi|380021534|ref|XP_003694618.1| PREDICTED: contactin-like [Apis florea]
Length = 1641
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/484 (67%), Positives = 393/484 (81%), Gaps = 3/484 (0%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MDN+ +LTWTCEAFG+PDVTYSWFRNGE+LN ETL ED+ RY IQDNVL+I+ L+PERD
Sbjct: 503 MDNRGELTWTCEAFGIPDVTYSWFRNGEILNMETLSSEDKGRYSIQDNVLSIKNLDPERD 562
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
AMYQCRA+NQLKTRYSSAQLR+L+LKPSFKKRP+E ETYA E GN+TI CNPEAAP+PK
Sbjct: 563 QAMYQCRARNQLKTRYSSAQLRILSLKPSFKKRPMEPETYAAEKGNITIICNPEAAPRPK 622
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
FVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y CTATN +G DE++GRLIVL GP
Sbjct: 623 FVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYICTATNQYGNDETRGRLIVLRGP 682
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E+LP +IT A +N LRC+ +E+LDVAYIW HNG+RI + DL + P +NI+G
Sbjct: 683 QFMEKLPQQITTAVMQNQTLRCTGEIDEMLDVAYIWKHNGLRIRDEDL--INNPRLNING 740
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I NA+FA+AGEYEC++KS V +IS+KT V +EGPPG PGGVQV + KTS T++WT
Sbjct: 741 EELNIINATFAEAGEYECIIKSAVSEISSKTVVTIEGPPGPPGGVQVKNIVKTSTTLRWT 800
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
DGA NG+PIT Y I ARTNWN TWF + E++ EVDRY GRKEA +ENVL P++TYEF+
Sbjct: 801 DGAFNGKPITMYSISARTNWNHTWFTIIENITAIEVDRYNGRKEAYLENVLNPYTTYEFR 860
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A NELGY PSSPSPQY+T +DKP + P IGGGGGKIGDL+I+W PLP +QN P I
Sbjct: 861 VSAFNELGYSLPSSPSPQYSTSSDKPMKVPFNIGGGGGKIGDLTITWNPLPPSEQNGPGI 920
Query: 421 YYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
YYK+FWR+K ++TEFQS +LK YGNVG +VV I ++YYTEYEVKVQA+N +G GP S
Sbjct: 921 YYKVFWRRKYHETEFQSLSLKNYGNVGRSVVPIQQQYYYTEYEVKVQAVNALGSGPISNA 980
Query: 480 VTIW 483
VTI+
Sbjct: 981 VTIF 984
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 125/323 (38%), Gaps = 52/323 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++ +C A G P TY WF+ N +L+ ++ PL + RY + L I + D
Sbjct: 214 DVSLSCLAGGYPTPTYEWFKEDYENDKLIATKIDPLNNV-RYTVSGGTLIIYEPDQTEDR 272
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C+A N+ T S S +L + KR SE + ++C+ P+ P
Sbjct: 273 GSYHCKATNKFGTIVSESVELSFGYILEFNLKR---SEERGDQNWGKAVYCDPPQHYPGV 329
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR---- 173
K+ W +D N + R + +G L S + D G YSC NV + GR
Sbjct: 330 KYYWARDYFPNFVEEDKRVFVSNDGALYFSALEMIDRGNYSC---NVQSVASDTGRNGPF 386
Query: 174 ----------LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L P+ + + P+ I A ++L C A + +Y WT G +
Sbjct: 387 FPLRVDPHSSFQQLKFPNNFPKAFPEAPI-AEEEVRLECIAFGYPV--PSYNWTRRGAPL 443
Query: 224 GNMDLNE-----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
L P I++D D GEY C V + I T+ ++
Sbjct: 444 PRGAYTTSYNRVLIIPKIHVD------------DQGEYICRVYNDRLSIENGVTLTIQAA 491
Query: 279 PGLPGGVQVVEVH-KTSATIQWT 300
P + +V+ H + WT
Sbjct: 492 PNFT--IPLVDKHMDNRGELTWT 512
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWF-NVSEHV 331
+ P +P + TI W NG P +YK+ R ++ T F ++S
Sbjct: 884 DKPMKVPFNIGGGGGKIGDLTITWNPLPPSEQNG-PGIYYKVFWRRKYHETEFQSLSLKN 942
Query: 332 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
G GR I+ ++ YE KV A N LG G P S + + D P AP
Sbjct: 943 YGN-----VGRSVVPIQQQYY-YTEYEVKVQAVNALGSG-PISNAVTIFSAEDMPQVAPQ 995
Query: 392 RIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIA 448
++ L +SW+P+ REK I ++I +W++ N E L
Sbjct: 996 QVVAQSYNSTSLKVSWKPIEETREKIRGKLIGHRIKYWKENNREENAVYYLSRSRRPWAL 1055
Query: 449 VVRI-PSEFYYTEYEVKVQAINDVGPGPESE 478
VV + P +YY VKV A N G GPESE
Sbjct: 1056 VVGLQPDTYYY----VKVMAYNSAGEGPESE 1082
>gi|307183641|gb|EFN70344.1| Contactin [Camponotus floridanus]
Length = 1156
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/484 (67%), Positives = 399/484 (82%), Gaps = 3/484 (0%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MDN+ DLTWTCEAFG+PDVTY+WFRNGE+L+ TLP ED+DRY IQDNV+ I+YL+PERD
Sbjct: 435 MDNRGDLTWTCEAFGIPDVTYNWFRNGEILDMYTLPPEDRDRYTIQDNVINIKYLDPERD 494
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
AMYQCRAKNQLKT YSSAQLRVL+LKPSFKKRP+ESETYA EGGNVTI C PEAAP+PK
Sbjct: 495 QAMYQCRAKNQLKTVYSSAQLRVLSLKPSFKKRPMESETYAAEGGNVTIVCKPEAAPRPK 554
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
FVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y CTATN +G DE++GRLIVL GP
Sbjct: 555 FVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYVCTATNQYGSDETRGRLIVLRGP 614
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
E+LPP++ ++ + N LRC +T+E+LDVAYIW HNG+RI + DL + +IDG
Sbjct: 615 ELIERLPPRLIMSYNNNQTLRCLGNTDEMLDVAYIWRHNGMRIRDKDLE--NNRHWHIDG 672
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L+I NA+FA++GEYEC++KS VG+IS+KT +IV GPPG PGGVQVV + K SAT++WT
Sbjct: 673 EYLDIINATFAESGEYECILKSAVGEISSKTDLIVNGPPGPPGGVQVVNIVKISATLRWT 732
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
DGA NG+ IT Y I ARTNWN TWF + E++ E+DRY GRKEA +ENVL P++TYEF+
Sbjct: 733 DGAFNGKVITMYTISARTNWNRTWFPLVENITAIEMDRYNGRKEAFLENVLNPYTTYEFR 792
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
++A NELGYG PSSPSPQY+TP DKP ++PS I GGGGKIGDL+I+W+PLP QN P I
Sbjct: 793 ILAFNELGYGPPSSPSPQYSTPPDKPTKSPSNISGGGGKIGDLTITWDPLPSSDQNGPGI 852
Query: 421 YYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
YYKIFWR+K +D+E+QS L+EYGNVG +VV I S+FYYT+YEVKVQAIN +G GP SE
Sbjct: 853 YYKIFWRRKGHDSEYQSLPLREYGNVGSSVVPIQSQFYYTKYEVKVQAINVIGEGPISET 912
Query: 480 VTIW 483
T++
Sbjct: 913 TTVY 916
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 114/310 (36%), Gaps = 45/310 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++ +C A G P TY WF+ N L+ ++ PL + +RY + L I D
Sbjct: 213 DVSLSCLAGGYPTPTYEWFKEDYENDRLIATKIDPLSN-NRYTVSGGTLIIYEPEQTHDR 271
Query: 62 AMYQCRAKNQLKTRYS-SAQLRV-LTLKPSFKKRPLESETYAGE---------------- 103
Y C+A N+ T S S +L L+ + K+ + + G+
Sbjct: 272 GSYHCKATNKFGTIISESVELSFGYILEFNLKRGEERGDNHWGKAVYCDPPQHFPASFQQ 331
Query: 104 -----------------GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 146
G V + C P P + W + G+++ G + N L+I
Sbjct: 332 LKFPNNFPKAFPEAPMAGEEVRLECIAFGYPVPSYNWTRRGSVLPRGAYATSY-NRVLII 390
Query: 147 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 206
V +D G Y C N E+ +L + P++ L K + +L C A
Sbjct: 391 PRVRVEDQGEYVCRVYNDRLSIENSVQLTIQAAPNFTIPLVDK-HMDNRGDLTWTCEAFG 449
Query: 207 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVG 265
+ DV Y W NG + L + I ++ I D Y+C K+ +
Sbjct: 450 --IPDVTYNWFRNGEILDMYTLPPEDRDRYTIQDNVINIKYLDPERDQAMYQCRAKNQLK 507
Query: 266 KISTKTTVIV 275
+ + + V
Sbjct: 508 TVYSSAQLRV 517
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 103/278 (37%), Gaps = 24/278 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C AFG P +Y+W R G +L + VL I + E D Y CR N
Sbjct: 356 CIAFGYPVPSYNWTRRGSVLPRGAYATS-------YNRVLIIPRVRVE-DQGEYVCRVYN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ +S QL + P+F PL + + G++T C P + W ++G I+
Sbjct: 408 DRLSIENSVQL-TIQAAPNFTI-PL-VDKHMDNRGDLTWTCEAFGIPDVTYNWFRNGEIL 464
Query: 131 G-------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
R I +N + D +Y C A N S +L VL +
Sbjct: 465 DMYTLPPEDRDRYTIQDNVINIKYLDPERDQAMYQCRAKNQLKTVYSSAQLRVLSLKPSF 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
++ P + A + E ++W +G IG+ + ++ G L
Sbjct: 525 KKRPMESETYAAEGGNVTIVCKPEAAPRPKFVWKKDGNVIGSGGRRRI------LETGNL 578
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
I+ S D G Y C + G T+ +IV P L
Sbjct: 579 IISPVSRDDEGTYVCTATNQYGSDETRGRLIVLRGPEL 616
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL--P 411
++ YE KV A N +G G P S + + D P AP ++ L+I+W+P+
Sbjct: 891 YTKYEVKVQAINVIGEG-PISETTTVYSAEDMPQVAPQQVYSMSYNSTSLNITWQPIEQT 949
Query: 412 REKQNAPNIYYKI-FWRK----KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
RE+ I ++I +W++ ++ T + S T + + + V P +YY VKV
Sbjct: 950 RERVRGKLIGHRIKYWKESVPEEHATYYLSRTTRPWS---LVVGLQPDTYYY----VKVM 1002
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1003 AYNSAGEGPESE 1014
>gi|307210402|gb|EFN86967.1| Contactin [Harpegnathos saltator]
Length = 1647
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 315/484 (65%), Positives = 393/484 (81%), Gaps = 4/484 (0%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MDN+ DLTWTCEAFG+PDVTY+WFRNGE+ + TLP ED+DRY IQDNVLTI+ LNPERD
Sbjct: 509 MDNKGDLTWTCEAFGLPDVTYTWFRNGEIFDMFTLPPEDRDRYIIQDNVLTIKGLNPERD 568
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
AMYQC AKNQLKT YSSAQLRVL+LKPSFKKRP+ESETYA EGGNVT+ C PEAAPKP
Sbjct: 569 EAMYQCCAKNQLKTTYSSAQLRVLSLKPSFKKRPMESETYAAEGGNVTLMCKPEAAPKPD 628
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W+KD +G+GGRR+I NGNL+ISPVSRDD G Y C ATN +G DE++GRLIVL P
Sbjct: 629 FKWRKDKTTLGAGGRRRIV-NGNLIISPVSRDDEGTYVCVATNEYGQDETRGRLIVLRAP 687
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E+LP +I ++ ++N LRC + +E+LD+AYIW HNG+RI N DL + P I++DG
Sbjct: 688 YFIERLPTRIIMSYNQNQTLRCLGYADEMLDMAYIWKHNGMRIRNKDL--MNNPRIHVDG 745
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L+I NA+F + G+YECV+KS VG+IS+KT +IVEGPPG PGG+ V+ V KTSATI+WT
Sbjct: 746 EYLDIINATFVETGDYECVLKSAVGEISSKTILIVEGPPGPPGGILVMNVAKTSATIRWT 805
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
DGA NGR IT Y++ ART WN+TWF V E++ E+DRY GRKEA +ENVL P+S+YEF+
Sbjct: 806 DGALNGRLITMYRVEARTKWNNTWFPVVENITAIEMDRYIGRKEAHLENVLNPYSSYEFR 865
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A NE GYG PSSPSP+++T ADKP +APS I GGGGKIGDL+I+W+PL QN P I
Sbjct: 866 VSAFNEFGYGPPSSPSPRHSTLADKPTKAPSNISGGGGKIGDLTITWDPLSPSDQNGPRI 925
Query: 421 YYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
YYKIFWR+K ++T+FQS +LKE+GN+G++VV + S++YYTEYEVKVQAIND+G GP S++
Sbjct: 926 YYKIFWRRKGHETQFQSLSLKEFGNIGMSVVSVQSKYYYTEYEVKVQAINDLGAGPISDI 985
Query: 480 VTIW 483
T++
Sbjct: 986 YTVY 989
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 115/278 (41%), Gaps = 24/278 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C AFG P +++W R L TLP E + D VL I + E D Y CRA N
Sbjct: 425 CIAFGYPVPSFNWTRKDSNLKDLTLPREAYTTSY--DRVLIIPRVRVE-DQGEYVCRAYN 481
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ +S QL + +P+F PL + + G++T C P + W ++G I
Sbjct: 482 DKLSIENSVQL-TIQAEPTFTI-PL-VDKHMDNKGDLTWTCEAFGLPDVTYTWFRNGEIF 538
Query: 131 G------SGGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVLH-GPSY 182
R I ++ L I ++ + D +Y C A N S +L VL PS+
Sbjct: 539 DMFTLPPEDRDRYIIQDNVLTIKGLNPERDEAMYQCCAKNQLKTTYSSAQLRVLSLKPSF 598
Query: 183 YEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
++ T AA N+ L C D + W + +G + ++G
Sbjct: 599 KKRPMESETYAAEGGNVTLMCKPEAAPKPD--FKWRKDKTTLGAGGRRRI------VNGN 650
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
L+ I+ S D G Y CV + G+ T+ +IV P
Sbjct: 651 LI-ISPVSRDDEGTYVCVATNEYGQDETRGRLIVLRAP 687
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 125/319 (39%), Gaps = 39/319 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+ +C A G P TY WF+ N L+ + P+ + +RY + L I + D
Sbjct: 215 DVYLSCLAGGYPTPTYEWFKENYENDRLIAIKIDPISN-NRYTVSGGTLIIYEPEQKIDR 273
Query: 62 AMYQCRAKNQLKTRYS-SAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y C+A N+ S S +L L+ + K+ + + G+ ++C+ P+ P
Sbjct: 274 GTYHCKASNKFGIIISESVELSFGYILEFNLKRSEERGDNHWGKA----VYCDPPQHFPG 329
Query: 119 PKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR--- 173
K+ W +D N + R + +G L S + D G YSC NV + GR
Sbjct: 330 VKYYWARDYFPNFVEEDKRVFVSHDGALYFSALETIDRGNYSC---NVQSVASDTGRNGP 386
Query: 174 -----------LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
L P+ + + P+ IA ++L C A + ++ WT
Sbjct: 387 FFPLRVDMHSSFQQLKFPNNFPKAFPEAPIAGEE-VRLECIAFGYPV--PSFNWTRKDSN 443
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 282
+ ++ L E + D L+ I D GEY C + I + ++ P
Sbjct: 444 LKDLTLPR-EAYTTSYDRVLI-IPRVRVEDQGEYVCRAYNDKLSIENSVQLTIQAEPTFT 501
Query: 283 GGVQVVEVH-KTSATIQWT 300
+ +V+ H + WT
Sbjct: 502 --IPLVDKHMDNKGDLTWT 518
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 26/194 (13%)
Query: 296 TIQW---TDGATNGRPITHYKIIARTNWNSTWF-NVSEHVIGKEVDRYTGRKEASIENVL 351
TI W + NG P +YKI R + T F ++S G G S+++
Sbjct: 909 TITWDPLSPSDQNG-PRIYYKIFWRRKGHETQFQSLSLKEFGN-----IGMSVVSVQSKY 962
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL- 410
++ YE KV A N+LG G S Y + D P AP + L++SW P+
Sbjct: 963 Y-YTEYEVKVQAINDLGAGPISDIYTVY-SAEDMPQVAPQLVVAMSYNSTSLNVSWSPIE 1020
Query: 411 -PREKQNAPNIYYKIFWRKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
RE+ I ++I + K N E + S T + + + V P +Y+ VK
Sbjct: 1021 QTRERVRGKLIGHRIKYWKNNFPEEGAVYYLSRTTRPWS---LVVGLQPDTYYF----VK 1073
Query: 465 VQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 1074 VMAYNSAGEGPESE 1087
>gi|242009529|ref|XP_002425536.1| Contactin precursor, putative [Pediculus humanus corporis]
gi|212509411|gb|EEB12798.1| Contactin precursor, putative [Pediculus humanus corporis]
Length = 1266
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 318/484 (65%), Positives = 382/484 (78%), Gaps = 4/484 (0%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D Q DLTWTCEAFG+PDV Y+WFRNG LN LP +D+DRYF+QDN+L I+ LNP D
Sbjct: 546 LDYQEDLTWTCEAFGIPDVNYTWFRNGLPLNPFNLPPQDRDRYFVQDNILQIKRLNPLSD 605
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQCRA NQLKT+YSSAQLRVL+ KPSF+K+PLE+ETYA EGGNVTI CNPEAAP+PK
Sbjct: 606 AGMYQCRASNQLKTKYSSAQLRVLSFKPSFEKKPLEAETYAAEGGNVTIVCNPEAAPRPK 665
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
FVWKK+ +I+GSGGRRKI ENGNL+ISPVSRDD G+Y+CTA+N +G+DES+G LIVL P
Sbjct: 666 FVWKKNNDILGSGGRRKILENGNLIISPVSRDDEGLYTCTASNNYGVDESRGLLIVLRAP 725
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
PP+I + N L C A+T+ELLD AYIWTHNG+RI D + L + DG
Sbjct: 726 KMTSTFPPQIITSVMENFTLNCEANTDELLDTAYIWTHNGIRIKERDSSNLR---LIPDG 782
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G+L + N + A+AGEYEC+VKS VG+ISTKT VIV GPPG PGGVQVV + TSATIQWT
Sbjct: 783 GILHVINTTLAEAGEYECIVKSAVGRISTKTNVIVHGPPGPPGGVQVVSISTTSATIQWT 842
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
DGA+NGRPI +Y + ARTNWNSTW NV++ + +EVDRY RKEA +ENVL PWS YEF+
Sbjct: 843 DGASNGRPILYYNVAARTNWNSTWQNVTKLITAREVDRYNNRKEAILENVLSPWSIYEFR 902
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N++G G PS PSPQY+TP D P + PS IGGGGGKIGDLSI+W PLP + QN P I
Sbjct: 903 VLAVNQIGPGYPSLPSPQYSTPPDSPNKPPSNIGGGGGKIGDLSITWTPLPPQDQNGPGI 962
Query: 421 YYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
YYKIFWR+ + EF+ + LKE+GNVG AVVR+ SE+Y+TEYEVKVQAIND+G GPES V
Sbjct: 963 YYKIFWRRNGTNREFEFKELKEFGNVGAAVVRVNSEYYFTEYEVKVQAINDIGKGPESAV 1022
Query: 480 VTIW 483
I+
Sbjct: 1023 HVIY 1026
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 118/300 (39%), Gaps = 43/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+T C A G P TY WF+ N L + PL D+ RY I L I D
Sbjct: 257 DVTLRCLAGGYPSPTYEWFKEEYENDVLTSVLINPLVDK-RYTISGGNLIIYDPKQIEDR 315
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV----TIFCNPEAA- 116
Y C+A N+ + S ++K SF + A E GN TI+C+P
Sbjct: 316 GSYHCKATNKFGSILSE------SIKLSFGYINEFNLQRAPESGNQNWGKTIYCDPPPHF 369
Query: 117 PKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR- 173
P + W +D N + R + +G L S + D G YSCTA S GR
Sbjct: 370 PDINYKWTRDYFPNFVEEDRRVFVSFDGALYFSALQEIDRGSYSCTA---QSKVSSIGRT 426
Query: 174 -----LIVLHGPSYYE-QLP---PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
L V+ P+Y + + P PK+ A ++++L C A + Y WT G
Sbjct: 427 GPFFHLNVVTNPNYQQLKFPNNFPKVFPEAPLAGKDVRLECIAFGYPV--PTYNWTRRGA 484
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
+ + N N +L + AS D GEY C + I V ++ P
Sbjct: 485 PMPRGSV----FTNFN---RVLILPQASVEDQGEYVCRAFNDRASIENGVFVSIQAEPNF 537
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 28/285 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D+ C AFG P TY+W R G + ++ F N + I D Y
Sbjct: 462 DVRLECIAFGYPVPTYNWTRRGAPMPRGSV--------FTNFNRVLILPQASVEDQGEYV 513
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
CRA N + + + +P+F PL ++ + ++T C P + W +
Sbjct: 514 CRAFND-RASIENGVFVSIQAEPNFTI-PL-ADKHLDYQEDLTWTCEAFGIPDVNYTWFR 570
Query: 126 DGNIIG-----SGGRRKIFENGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+G + R + F N+L ++P+S D+G+Y C A+N S +L V
Sbjct: 571 NGLPLNPFNLPPQDRDRYFVQDNILQIKRLNPLS--DAGMYQCRASNQLKTKYSSAQLRV 628
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
L +E+ P + A + + E ++W N +G+ ++
Sbjct: 629 LSFKPSFEKKPLEAETYAAEGGNVTIVCNPEAAPRPKFVWKKNNDILGSGGRRKI----- 683
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
++ G L I+ S D G Y C + G ++ +IV P +
Sbjct: 684 -LENGNLIISPVSRDDEGLYTCTASNNYGVDESRGLLIVLRAPKM 727
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNE 366
P +YKI R N + F KE+ + A + N ++ YE KV A N+
Sbjct: 960 PGIYYKIFWRRNGTNREFEF------KELKEFGNVGAAVVRVNSEYYFTEYEVKVQAIND 1013
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAPNIYYKI 424
+G G S+ Y+ + P AP ++ L+++W P+P R+ I +++
Sbjct: 1014 IGKGPESAVHVIYSA-EEMPLAAPQQVSARSFNSTSLNVTWTPIPMRRDIVRGKLIGHRL 1072
Query: 425 FWRKKNDTEFQ-----SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ K + EF+ S TL+ + +V + + YY VKV A N+ G GPESE
Sbjct: 1073 KYWKTSQQEFEAVYYLSRTLRPWA----LIVGLQPDTYYN---VKVMAYNNAGEGPESE 1124
>gi|270015155|gb|EFA11603.1| hypothetical protein TcasGA2_TC013632 [Tribolium castaneum]
Length = 1180
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/477 (60%), Positives = 368/477 (77%), Gaps = 3/477 (0%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++++L WTCEAFG+PDV Y+W++NG L + E++DR IQDNVLTIRYL+ ERDP
Sbjct: 562 DSKSELVWTCEAFGIPDVNYTWWKNGRQLVMGYMEPEERDRIRIQDNVLTIRYLDQERDP 621
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQCRA N LKT+YSSAQLRVL +P+FKK PLE+ETYA EGG+VTI CNPEAAP+P+F
Sbjct: 622 GMYQCRATNSLKTKYSSAQLRVLAFRPTFKKHPLEAETYAAEGGSVTIKCNPEAAPRPEF 681
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
VWKKDGN++GSGG R+I ENGNL+IS VSRDD G Y+C A+N G+DESKGRLIVL GP
Sbjct: 682 VWKKDGNVLGSGGHRRILENGNLVISSVSRDDEGQYTCRASNQFGVDESKGRLIVLRGPR 741
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E L PKI R LRC A TEE+LD+AY+W+HNG++I ++D+ + + IDGG
Sbjct: 742 LIESLTPKIVTTVGRYFDLRCLAETEEMLDIAYVWSHNGIKIRDIDIKNMNY-RLRIDGG 800
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L +TNA+F DAGEYEC +KSTVGKIS+++ V+VEG P P G V + K+S T+QWTD
Sbjct: 801 FLSVTNATFTDAGEYECTIKSTVGKISSRSVVVVEG-PPGPPGGVTVSIQKSSFTLQWTD 859
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
GAT+G I Y + RTNWN TW N+S V +E+DRYTG+KE+ I+ L PWSTYEF++
Sbjct: 860 GATHGSQIRGYTVSGRTNWNQTWVNISYIVDVREIDRYTGQKESLIDTALTPWSTYEFRI 919
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N G G PS+PSP+++TP D+PY AP IGGGGGKIGDL+I+W PL ++QN P IY
Sbjct: 920 AAWNSWGMGPPSAPSPRHSTPPDRPYIAPYNIGGGGGKIGDLTITWSPLKPDEQNGPGIY 979
Query: 422 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y+IFW++K+ + EFQ++ LKE+GN G+AVV IP ++YYTEY VKVQAIN +GPGP S
Sbjct: 980 YRIFWKRKDQEVEFQTQELKEFGNTGMAVVHIPPQYYYTEYIVKVQAINQIGPGPIS 1036
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 35/289 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG----ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++ +C A G P TY WFR +L+ PL D RY I +L I +RD
Sbjct: 272 DISLSCLAGGFPTPTYEWFREDYEIDKLVARRIDPLSDP-RYTISGGMLIIHEPEEKRDH 330
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
A Y C+A N+ T S S QL +K KR ES + I+C+ P P
Sbjct: 331 ATYHCKASNKFGTIISESVQLNFGFIKEFVLKRSPES---GDKNWGKAIYCDPPNHFPSV 387
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL--I 175
++ W +D N + R + +G L S + D YSC+ + G +
Sbjct: 388 RYSWSRDYFPNFVEEDRRVFVSYDGALYFSALETIDKANYSCSVQSEFSDSGRNGPFFPL 447
Query: 176 VLHGPSYYEQLP---------PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+++ S+Y+QL P IA + ++L C A + +Y WT G +
Sbjct: 448 MVNPHSHYQQLKFPNNFPKAFPDAPIAG-KEVRLECMAFGYPV--PSYNWTRRGAPLPRS 504
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ ++ +L I + D GEY C ++ + ST+ ++I+
Sbjct: 505 AV-------LSSFNRVLTIPHVQVEDQGEYVC--RAYNDRASTENSLIL 544
>gi|91082585|ref|XP_967335.1| PREDICTED: similar to cell adhesion molecule [Tribolium castaneum]
Length = 1192
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/477 (60%), Positives = 366/477 (76%), Gaps = 11/477 (2%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++++L WTCEAFG+PDV Y+W++NG L ++DR IQDNVLTIRYL+ ERDP
Sbjct: 562 DSKSELVWTCEAFGIPDVNYTWWKNGRQL--------ERDRIRIQDNVLTIRYLDQERDP 613
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQCRA N LKT+YSSAQLRVL +P+FKK PLE+ETYA EGG+VTI CNPEAAP+P+F
Sbjct: 614 GMYQCRATNSLKTKYSSAQLRVLAFRPTFKKHPLEAETYAAEGGSVTIKCNPEAAPRPEF 673
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
VWKKDGN++GSGG R+I ENGNL+IS VSRDD G Y+C A+N G+DESKGRLIVL GP
Sbjct: 674 VWKKDGNVLGSGGHRRILENGNLVISSVSRDDEGQYTCRASNQFGVDESKGRLIVLRGPR 733
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E L PKI R LRC A TEE+LD+AY+W+HNG++I ++D+ + + IDGG
Sbjct: 734 LIESLTPKIVTTVGRYFDLRCLAETEEMLDIAYVWSHNGIKIRDIDIKNMNY-RLRIDGG 792
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L +TNA+F DAGEYEC +KSTVGKIS+++ V+VEG P P G V + K+S T+QWTD
Sbjct: 793 FLSVTNATFTDAGEYECTIKSTVGKISSRSVVVVEG-PPGPPGGVTVSIQKSSFTLQWTD 851
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
GAT+G I Y + RTNWN TW N+S V +E+DRYTG+KE+ I+ L PWSTYEF++
Sbjct: 852 GATHGSQIRGYTVSGRTNWNQTWVNISYIVDVREIDRYTGQKESLIDTALTPWSTYEFRI 911
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N G G PS+PSP+++TP D+PY AP IGGGGGKIGDL+I+W PL ++QN P IY
Sbjct: 912 AAWNSWGMGPPSAPSPRHSTPPDRPYIAPYNIGGGGGKIGDLTITWSPLKPDEQNGPGIY 971
Query: 422 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y+IFW++K+ + EFQ++ LKE+GN G+AVV IP ++YYTEY VKVQAIN +GPGP S
Sbjct: 972 YRIFWKRKDQEVEFQTQELKEFGNTGMAVVHIPPQYYYTEYIVKVQAINQIGPGPIS 1028
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 35/289 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG----ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++ +C A G P TY WFR +L+ PL D RY I +L I +RD
Sbjct: 272 DISLSCLAGGFPTPTYEWFREDYEIDKLVARRIDPLSDP-RYTISGGMLIIHEPEEKRDH 330
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
A Y C+A N+ T S S QL +K KR ES + I+C+ P P
Sbjct: 331 ATYHCKASNKFGTIISESVQLNFGFIKEFVLKRSPES---GDKNWGKAIYCDPPNHFPSV 387
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL--I 175
++ W +D N + R + +G L S + D YSC+ + G +
Sbjct: 388 RYSWSRDYFPNFVEEDRRVFVSYDGALYFSALETIDKANYSCSVQSEFSDSGRNGPFFPL 447
Query: 176 VLHGPSYYEQLP---------PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+++ S+Y+QL P IA + ++L C A + +Y WT G +
Sbjct: 448 MVNPHSHYQQLKFPNNFPKAFPDAPIAG-KEVRLECMAFGYPV--PSYNWTRRGAPLPRS 504
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ ++ +L I + D GEY C ++ + ST+ ++I+
Sbjct: 505 AV-------LSSFNRVLTIPHVQVEDQGEYVC--RAYNDRASTENSLIL 544
>gi|183979292|dbj|BAG30765.1| contactin [Papilio xuthus]
Length = 1326
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/486 (57%), Positives = 363/486 (74%), Gaps = 5/486 (1%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MDN+ DL W CEAFG+PDV Y+W++NG L+ +TL ED+DRY IQDNVL I++L+P RD
Sbjct: 596 MDNKGDLHWNCEAFGIPDVNYTWWKNGVKLSMDTLEDEDRDRYIIQDNVLIIKFLDPARD 655
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
P MYQC AKNQLK +YS+ QLRVL+LKPSFKKRPLESETY EGGNVT+ CNPEAAPKP
Sbjct: 656 PGMYQCEAKNQLKAKYSTGQLRVLSLKPSFKKRPLESETYGSEGGNVTLKCNPEAAPKPT 715
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F WKKD +IG+GG+R I E GNL+I +SRDD G+Y+C A N +G DES+GRLIVL P
Sbjct: 716 FTWKKDNIVIGAGGKRFITETGNLIIRQLSRDDEGVYTCVAKNQYGSDESRGRLIVLRTP 775
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E+LPP+IT + + L C+A + +LD AY+W HNG+R+ + + + + IDG
Sbjct: 776 RFLERLPPRITTQVGQVIFLHCNAEIDPILDTAYLWNHNGMRLKD-ESDMYADKRLKIDG 834
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I + S +D G+YECVVKS +G+IS+ T + +EGPPG PGG+Q++ + ++S T++WT
Sbjct: 835 GELTIFDVSLSDVGDYECVVKSAIGRISSHTQLRIEGPPGPPGGLQIMNIGRSSITLEWT 894
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWSTYE 358
D +NGRP+T Y + RT WN++W +S++ IG EVDRY GRK A + L+P S YE
Sbjct: 895 DSNSNGRPVTSYVLTGRTQWNTSWTVISDN-IGNIIEVDRYNGRKRAILNTALMPGSVYE 953
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N LG G+PS+PSPQ++T DKPYQAP+ +GGGGGKIGDL+I+W PLP QN P
Sbjct: 954 FRVQAVNALGVGKPSAPSPQFSTLPDKPYQAPANVGGGGGKIGDLTITWTPLPPHLQNGP 1013
Query: 419 NIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
I+YKIFWR+ + EFQS LKEYGNVG+ VV + ++YT Y VKVQA+N +G GPES
Sbjct: 1014 GIHYKIFWRRNGTEVEFQSLLLKEYGNVGMHVVHVSLNYFYTPYNVKVQALNSLGAGPES 1073
Query: 478 EVVTIW 483
E+ TI+
Sbjct: 1074 EMATIY 1079
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 197/514 (38%), Gaps = 76/514 (14%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++T C P T++W ++ ++ + R+ + L IR L+ + D +Y
Sbjct: 700 GNVTLKCNPEAAPKPTFTWKKDNIVIGA------GGKRFITETGNLIIRQLSRD-DEGVY 752
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFV 122
C AKNQ + S +L VL ++ P T G+ + + CN E P ++
Sbjct: 753 TCVAKNQYGSDESRGRLIVLRTPRFLERLPPRITTQVGQV--IFLHCNAEIDPILDTAYL 810
Query: 123 WKKDGNIIGS-----GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W +G + +R + G L I VS D G Y C + G S +L +
Sbjct: 811 WNHNGMRLKDESDMYADKRLKIDGGELTIFDVSLSDVGDYECVVKSAIGRISSHTQLRIE 870
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAH-------TEELLDVAYIWTHNGVRIGNMDLNE 230
P L +I ++ L + T +L W + I + N
Sbjct: 871 GPPGPPGGL--QIMNIGRSSITLEWTDSNSNGRPVTSYVLTGRTQWNTSWTVISDNIGNI 928
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKST----VGKISTKT---TVIVEGPPGLPG 283
+E N G I N + YE V++ VGK S + + + + P P
Sbjct: 929 IEVDRYN--GRKRAILNTALMPGSVYEFRVQAVNALGVGKPSAPSPQFSTLPDKPYQAPA 986
Query: 284 GVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWF---------NVSEHV 331
V TI WT NG P HYKI R N F NV HV
Sbjct: 987 NVGGGGGKIGDLTITWTPLPPHLQNG-PGIHYKIFWRRNGTEVEFQSLLLKEYGNVGMHV 1045
Query: 332 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
+ ++ + ++ Y KV A N LG G P S + D P AP
Sbjct: 1046 VHVSLNYF--------------YTPYNVKVQALNSLGAG-PESEMATIYSAEDMPQVAPQ 1090
Query: 392 RIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTE----FQSETLKEYGN 444
++ L+++W+P+ R++ I +++ +W+++N + + S T + N
Sbjct: 1091 QVYSRSFNSTALNVTWDPIDQSRDRLRGRLIGHRLRYWKQENKEKECIYYLSRTTR---N 1147
Query: 445 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ V P +YY VKV A N G GPESE
Sbjct: 1148 WALIVGLQPDTYYY----VKVMAFNSAGEGPESE 1177
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 125/294 (42%), Gaps = 39/294 (13%)
Query: 10 TCEAFGVPDVTYSWFRN----GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
TC A G P TY WFR +L+ +E PL D R+ + L I N E D A Y
Sbjct: 311 TCIAGGFPGPTYKWFREDYQVDKLVFTEIDPLLDP-RFILSGGTLMIYNPNAETDNAQYH 369
Query: 66 CRAKNQLKT-RYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEA-APKPKFV 122
C A N+ T R S +L ++ +KRP+ES Y G+ + C+P + P F+
Sbjct: 370 CTASNKFGTIRSESVRLSFGFIREFNQKRPIESGNQYWGK----VMSCDPPSYYPSVNFL 425
Query: 123 WKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR-----LI 175
W ++ N++ R + +G L S + D G YSC NV GR +
Sbjct: 426 WARNYFPNLVEEDKRVFVSYDGGLYFSALETIDRGNYSC---NVMSKVSDAGRNGPFFPL 482
Query: 176 VLHGPSYYEQLP-----PKITIAA---HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
++ S ++QL PK+ A + ++L C + + +Y WT GN+
Sbjct: 483 YVYPHSDWQQLKFPNNFPKVFPDAPVVGQEVRLECVSFGYPV--PSYNWTRKN---GNIP 537
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
+ N D +L I N D GEY C V+S I + V+ P
Sbjct: 538 RKAHFS---NFD-RVLTIPNVGVEDEGEYVCDVRSDRANIHNSVFLKVQAEPNF 587
>gi|345481084|ref|XP_001605461.2| PREDICTED: contactin [Nasonia vitripennis]
Length = 937
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/490 (57%), Positives = 354/490 (72%), Gaps = 15/490 (3%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+T +C A G P TY WF+ N L++ + PL +RY I L I N D
Sbjct: 212 DVTLSCLADGYPTPTYEWFKEDFENDRLVSKKIDPLS-HNRYTISGGTLIIFSPNQTEDR 270
Query: 62 AMYQCRAKNQLKT-RYSSAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEA 115
Y C+A N+ T R S +L LKPSFKKRPLE ETYA EGGNVT+ CNPEA
Sbjct: 271 GTYHCKATNKFGTIRSESVELXXXXXXXXXLKPSFKKRPLEPETYAAEGGNVTLICNPEA 330
Query: 116 APKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
AP+PKF WKKDGN++GSGGRR+I + G+L+ISPVSRDD G Y C +N +G DES+GRLI
Sbjct: 331 APRPKFTWKKDGNVLGSGGRRRITDTGSLIISPVSRDDEGTYVCQVSNEYGNDESRGRLI 390
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
VL+GP E LPP I A + N LRC A+T+E+LDVAYIW HN +RI + DL P+
Sbjct: 391 VLNGPVLIESLPPTIRTAVNLNQTLRCMAYTDEMLDVAYIWMHNDMRIRDKDLK--ANPH 448
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
I I+GG L+I NA+FA+AG+YEC+VKSTVG+IS++TT+ +EGPPG PGG+QV+ V KTS
Sbjct: 449 IVINGGQLDIINATFAEAGDYECIVKSTVGRISSRTTITIEGPPGPPGGIQVLNVVKTSV 508
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPW 354
+ WTDGA NGRPI Y I A+TNWN TWFN++E + DR TGRK A +ENVL P+
Sbjct: 509 DLSWTDGAYNGRPIDRYTISAKTNWNQTWFNLTEDFTAYTIGDRNTGRKRAHLENVLRPF 568
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+TYEF++ AGNELGYG PS PSPQY+TP+DKP APS I GGGGK+GDL+I W+PL +
Sbjct: 569 TTYEFRIQAGNELGYGPPSLPSPQYSTPSDKPIVAPSNIRGGGGKLGDLTIKWDPLKSSE 628
Query: 415 QNAPNIYYKIFW-RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
Q P I+YK++W RKK ++EFQS LKE+GNVG++VV I S++YYTEYEV VQA NDVG
Sbjct: 629 QYGPGIFYKVYWRRKKGESEFQSLALKEHGNVGMSVVPIQSQYYYTEYEVMVQAANDVGY 688
Query: 474 GPESEVVTIW 483
GP+SE+ TI+
Sbjct: 689 GPKSEIFTIY 698
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL--P 411
++ YE V A N++GYG P S + D P AP + L+++W P+
Sbjct: 673 YTEYEVMVQAANDVGYG-PKSEIFTIYSAEDMPQVAPQLVTAFSYNGTALNVTWNPIEQT 731
Query: 412 REKQNAPNIYYKIFWRKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
RE+ I ++I + K+N E + S T + + + V P +YY VKV
Sbjct: 732 RERVRGRLIGHRIKYWKENGREEDAVYYLSRTTRPWS---LVVGLQPDTYYY----VKVM 784
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 785 AYNSAGEGPESE 796
>gi|195061304|ref|XP_001995968.1| GH14075 [Drosophila grimshawi]
gi|193891760|gb|EDV90626.1| GH14075 [Drosophila grimshawi]
Length = 1426
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/481 (55%), Positives = 345/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ T+ ++DRY IQDNVLTI++L E+D
Sbjct: 703 DYNSDVTFICEAFSIPDANYTWYKNAERLDPLTI---NRDRYVIQDNVLTIKFLEREKDE 759
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI CNPEAAP+PKF
Sbjct: 760 GMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTTIVCNPEAAPRPKF 819
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG ++GSGG R+I +G L+ISP SRDD G+YSC A+N G DES R+IVL
Sbjct: 820 QWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYSCIASNQAGQDESHARVIVLQEIR 879
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P +I H + L C A +ELLD+AY+W HNG + N + T I +D
Sbjct: 880 FVQTPPQRIVSREHDLIYLHCEAAYDELLDIAYVWKHNGEILRN---DHDGTQRIIVDWN 936
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N + DAG+YECVV+S V +I+TKT V++EG PG PGGVQV+E+ KT A I+W D
Sbjct: 937 SLTVHNTTMRDAGDYECVVQSAVNEITTKTNVVIEGAPGAPGGVQVIEIGKTKAIIEWVD 996
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS+YEF V
Sbjct: 997 GVNNGRQIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVTN-LTPWSSYEFSV 1055
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP ++GGGGGKIGDL+I+WEPL ++Q++ I+
Sbjct: 1056 TAVNDLGIGTPSTPSPIYSTYDDKPYIAPRKVGGGGGKIGDLTITWEPLLPQEQHSHGIH 1115
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ ++ +K+ NVG+AVV IP YYTEYEVKVQAIN +G GPESE +
Sbjct: 1116 YKVFWKLKGALEWATDVIKKQENVGVAVVNIPLNNYYTEYEVKVQAINSIGKGPESETIV 1175
Query: 482 I 482
I
Sbjct: 1176 I 1176
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 102/269 (37%), Gaps = 21/269 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C AFG P +Y+W R G+ L R I N T D Y C N
Sbjct: 623 CMAFGYPIPSYNWTRQGQPLQRNAY-TTSYGRVLIIKNATT-------NDNGQYTCSITN 674
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
KT S + + ++P F PL+ + +VT C + P + W K+ +
Sbjct: 675 PRKTLEKSIYINI-QMRPEFTI-PLK-DMIKDYNSDVTFICEAFSIPDANYTWYKNAERL 731
Query: 131 GS---GGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
R + ++ L I + R+ D G+Y C A N S +L VL +++
Sbjct: 732 DPLTINRDRYVIQDNVLTIKFLEREKDEGMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKH 791
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + I A N + E + W +G +G+ + + G L I+
Sbjct: 792 PLESEIYAVYNGNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRI------LPSGTLIIS 845
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIV 275
S D G Y C+ + G+ + VIV
Sbjct: 846 PTSRDDEGMYSCIASNQAGQDESHARVIV 874
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 112/273 (41%), Gaps = 31/273 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNS-ETLPLEDQ--DRYFIQDNVLTIRYLNPERDPA 62
D++ +C A G P TY W+R L ++ E + +E DRY I L I D
Sbjct: 413 DVSLSCLAGGYPTPTYEWYREVYLNDTLEYIKIEPLIVDRYTISGGNLIIYEPKQALDQG 472
Query: 63 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 473 AYHCVAENKYGRVRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPAI 528
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
K+ W +D N + R + +G L S + D YSCT + G L
Sbjct: 529 KYYWARDYFPNFVEEDQRVFVSHDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPL 588
Query: 178 HGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
S Y+ L PK+ A ++L C A + +Y WT G +
Sbjct: 589 RVTPNSNYQSLIFANTFPKVFPEAAVAGDEIRLECMAFGYPI--PSYNWTRQG---QPLQ 643
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVV 260
N T G +L I NA+ D G+Y C +
Sbjct: 644 RNAYTTSY----GRVLIIKNATTNDNGQYTCSI 672
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S + ++ D P AP R ++SW P+
Sbjct: 1152 YTEYEVKVQAINSIGKG-PESETIVIHSAEDMPQVAPQRPFALAYNSTCFNVSWSPIDMS 1210
Query: 414 KQNAPN--IYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
++N I +++ +W+ ++ E L +V + + YY VKV A N
Sbjct: 1211 RENIRGKLIGHRLKYWKTEHQEEDSVYYLSRTTRPWALIVGLQPDTYYF---VKVMAYNA 1267
Query: 471 VGPGPESE 478
G GPESE
Sbjct: 1268 AGEGPESE 1275
>gi|312383176|gb|EFR28362.1| hypothetical protein AND_03853 [Anopheles darlingi]
Length = 895
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/494 (53%), Positives = 346/494 (70%), Gaps = 13/494 (2%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D Q+ +T+ CEAF +PDV Y+W++NGEL++ ++D+Y IQDN+L I +L PE D
Sbjct: 141 DFQSSVTFLCEAFAIPDVNYTWYKNGELMDDREGGKFNRDKYTIQDNLLKINFLEPETDD 200
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC+A NQLK YSSAQLRVL++KPSFKKRPLESE Y+ GN TI C PEAAP PK
Sbjct: 201 GMYQCKATNQLKGVYSSAQLRVLSMKPSFKKRPLESEIYSIANGNTTIVCEPEAAPTPKI 260
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
VWKKDG++IGSGG RKI+ G L ISP SRDD G Y+C A+N GM ESK RLIVL
Sbjct: 261 VWKKDGSVIGSGGHRKIYPTGTLFISPTSRDDEGTYTCIASNNQGMAESKARLIVLQELR 320
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV------------RIGNMDLN 229
+ EQLP K+ L LRC ++LLDVA+IWTHNG R N+
Sbjct: 321 FTEQLPSKLIKQIGEMLYLRCDVTYDQLLDVAFIWTHNGQVLNVDNPEDERRRTANLGPA 380
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
+ ++ I I LE+ N + D GEYEC+ KS+V +I +K+ V+++GPPG PG V+V++
Sbjct: 381 QWDSARIRIHYNNLEVHNLTLVDGGEYECIAKSSVNRIVSKSQVLIQGPPGAPGAVKVID 440
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
+ KT A ++WT+G NGRPI +Y I+ RTNWN TW N+++HVI +EVDRY GR+ A++ N
Sbjct: 441 IKKTEAMLEWTNGNENGRPILYYNILGRTNWNRTWVNITQHVIAQEVDRYNGRRRATVGN 500
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L PW YEF V+A N+LG G PS PSP Y+T DKPY AP +GGGGGKIGDL+I+W+P
Sbjct: 501 -LTPWCGYEFSVVAVNDLGIGAPSLPSPVYSTQKDKPYIAPRNVGGGGGKIGDLTITWDP 559
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
L ++QN+ I+YK+F+R E+ SE LK GN+G AV+ + ++ YYT+YEVKVQAIN
Sbjct: 560 LLPQEQNSIEIHYKVFYRLHGQREWASEELKRQGNMGKAVIHVATDKYYTKYEVKVQAIN 619
Query: 470 DVGPGPESEVVTIW 483
D+G GP SE VTI+
Sbjct: 620 DLGMGPISEPVTIY 633
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 34/282 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWF-RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C +G P +Y+W RNG L LE+ +R + N D Y
Sbjct: 56 DVRLECMTYGYPVASYNWTRRNGNL--PRLSRLENFNRVLVIQNATV-------NDNGEY 106
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A+N K+ S + V ++P+F PL T + +VT C A P + W
Sbjct: 107 ACTARNGKKSIVQSIFVNV-QMEPNFTI-PLRDRTRDFQ-SSVTFLCEAFAIPDVNYTWY 163
Query: 125 KDGNII-----GSGGRRKIFENGNLL----ISPVSRDDSGIYSCTATN-VHGMDESKGRL 174
K+G ++ G R K NLL + P + D G+Y C ATN + G+ S
Sbjct: 164 KNGELMDDREGGKFNRDKYTIQDNLLKINFLEPET--DDGMYQCKATNQLKGVYSSAQLR 221
Query: 175 IVLHGPSYYEQ-LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
++ PS+ ++ L +I A+ N + C + +W +G IG+ ++
Sbjct: 222 VLSMKPSFKKRPLESEIYSIANGNTTIVCEPEAAPTPKI--VWKKDGSVIGSGGHRKI-- 277
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G L I+ S D G Y C+ + G +K +IV
Sbjct: 278 ----YPTGTLFISPTSRDDEGTYTCIASNNQGMAESKARLIV 315
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 29/179 (16%)
Query: 311 HYKIIARTNWNSTWF--------NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
HYK+ R + W N+ + VI D+Y ++ YE KV
Sbjct: 571 HYKVFYRLHGQREWASEELKRQGNMGKAVIHVATDKY--------------YTKYEVKVQ 616
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAPNI 420
A N+LG G S P Y+ D P AP + L+++W P+ RE I
Sbjct: 617 AINDLGMGPISEPVTIYSA-EDMPQVAPQQTIARSFNSTALNVTWVPVSQNRESIRGKLI 675
Query: 421 YYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+++ +W+K++ E L +V + + YY VKV A N G GPESE
Sbjct: 676 GHRLKYWKKEHKEEDSVYYLSRTTRPWALIVGLEPDTYYF---VKVMAYNAAGEGPESE 731
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 28/179 (15%)
Query: 89 SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN--LL 145
+F K PL G +V + C P + W +++GN+ R EN N L+
Sbjct: 46 AFPKVPLA-------GKDVRLECMTYGYPVASYNWTRRNGNL----PRLSRLENFNRVLV 94
Query: 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH---RNLQLRC 202
I + +D+G Y+CTA N G+ ++ Q+ P TI R+ Q
Sbjct: 95 IQNATVNDNGEYACTARN--------GKKSIVQSIFVNVQMEPNFTIPLRDRTRDFQSSV 146
Query: 203 SAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS-FADAGEYEC 258
+ E DV Y W NG + + + + I LL+I D G Y+C
Sbjct: 147 TFLCEAFAIPDVNYTWYKNGELMDDREGGKFNRDKYTIQDNLLKINFLEPETDDGMYQC 205
>gi|28571501|ref|NP_649461.2| contactin [Drosophila melanogaster]
gi|55976626|sp|Q9VN14.2|CONT_DROME RecName: Full=Contactin; Flags: Precursor
gi|28381126|gb|AAF52137.2| contactin [Drosophila melanogaster]
gi|33413906|gb|AAP44004.1| contactin [Drosophila melanogaster]
gi|60677949|gb|AAX33481.1| RE02061p [Drosophila melanogaster]
Length = 1390
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 343/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ + ++DRY IQDNVLTI++L ++D
Sbjct: 673 DYNSDVTFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDD 729
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 730 AMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKF 789
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG +IGSGG R+I +G L ISP SRDD GIY+C A+N G DES R+IVL
Sbjct: 790 QWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIR 849
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E P +I H + L C A +ELLD+AY+W HNG + N N T I +D
Sbjct: 850 FIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWN 906
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N S DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W D
Sbjct: 907 RLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVD 966
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 967 GSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 1025
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1026 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1085
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ +K+ ++G+AVV IP YYTEYEVKVQAIN VG GPESE+
Sbjct: 1086 YKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAV 1145
Query: 482 I 482
I
Sbjct: 1146 I 1146
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 39/277 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D+T +C A G P +Y+W+R + L + + QDRY I L I D
Sbjct: 383 DVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQG 442
Query: 63 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 443 AYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPDV 498
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR---- 173
++ W +D N + R + +G L S + D YSCT V + GR
Sbjct: 499 RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---VQTLVSDTGRNGPF 555
Query: 174 --LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L V +Y + ++ P+ +A ++L C A + +Y WT G+ +
Sbjct: 556 FPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI--PSYNWTRQGLPL 612
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ IN G +L I NA+ D GEY C +
Sbjct: 613 ------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 642
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1122 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1234 AYNAAGEGPESE 1245
>gi|194898472|ref|XP_001978813.1| GG12351 [Drosophila erecta]
gi|190650516|gb|EDV47771.1| GG12351 [Drosophila erecta]
Length = 1408
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/481 (55%), Positives = 345/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ T+ ++DRY IQDNVLTI+++ ++D
Sbjct: 690 DYNSDVTFICEAFAIPDANYTWYKNAERLDPTTI---NRDRYIIQDNVLTIKFIEKDKDD 746
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI CNPEAAP+PKF
Sbjct: 747 AMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCNPEAAPRPKF 806
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG +IGSGG R+I +G L+I+P SRDD GIY+C A+N G DES R+IVL
Sbjct: 807 QWKKDGQVIGSGGHRRILPSGTLIIAPTSRDDEGIYTCIASNQAGTDESHSRVIVLQEIR 866
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E P +I H + L C A +ELLD+AY+W HNG + N N T I +D
Sbjct: 867 FIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWT 923
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N + DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W D
Sbjct: 924 RLTVHNTTMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVD 983
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 984 GSNNGRVIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 1042
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1043 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1102
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ +K+ ++G+AVV IP YYTEYEVKVQAIN VG GPESE+
Sbjct: 1103 YKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAV 1162
Query: 482 I 482
I
Sbjct: 1163 I 1163
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 31/273 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D+T +C A G P +Y+W+R + L + + QDRY I L I D
Sbjct: 400 DVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQG 459
Query: 63 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 460 AYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPDV 515
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
++ W +D N + R + +G L S + D YSCT + G L
Sbjct: 516 RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPL 575
Query: 178 HGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
S Y+ L PK+ A ++L C A + +Y WT G+ +
Sbjct: 576 RVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPI--PSYNWTRQGLPL---- 629
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ IN G +L I NA+ D GEY C +
Sbjct: 630 --QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 659
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1139 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1197
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1198 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1250
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1251 AYNAAGEGPESE 1262
>gi|195343401|ref|XP_002038286.1| GM10750 [Drosophila sechellia]
gi|194133307|gb|EDW54823.1| GM10750 [Drosophila sechellia]
Length = 1390
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/481 (55%), Positives = 344/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ + ++DRY IQDNVLTI++L ++D
Sbjct: 673 DYNSDVTFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDD 729
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 730 AMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKF 789
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG +IGSGG R+I +G L I+P SRDD GIY+C A+N G DES R+IVL
Sbjct: 790 QWKKDGQVIGSGGHRRILPSGTLTIAPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIR 849
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E P +I H + L C A +ELLD+AY+W HNG + N N T I +D
Sbjct: 850 FIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWN 906
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N S DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W D
Sbjct: 907 RLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVD 966
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 967 GSNNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 1025
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1026 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1085
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ +K+ ++G+AVV IP YYTEYEVKVQAIN+VG GPESE+
Sbjct: 1086 YKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINNVGKGPESEIAV 1145
Query: 482 I 482
I
Sbjct: 1146 I 1146
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 39/277 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D+T +C A G P +Y+W+R + L + + QDRY I L I D
Sbjct: 383 DVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQG 442
Query: 63 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 443 AYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPDV 498
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR---- 173
++ W +D N + R + +G L S + D YSCT V + GR
Sbjct: 499 RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---VQTLVSDTGRNGPF 555
Query: 174 --LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L V +Y + ++ P+ +A ++L C A + +Y WT G+ +
Sbjct: 556 FPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI--PSYNWTRQGLPL 612
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ IN G +L I NA+ D GEY C +
Sbjct: 613 ------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 642
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1122 YTEYEVKVQAINNVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1234 AYNAAGEGPESE 1245
>gi|20152017|gb|AAM11368.1| LD28757p [Drosophila melanogaster]
Length = 1036
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 343/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ + ++DRY IQDNVLTI++L ++D
Sbjct: 319 DYNSDVTFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDD 375
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 376 AMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKF 435
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG +IGSGG R+I +G L ISP SRDD GIY+C A+N G DES R+IVL
Sbjct: 436 QWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIR 495
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E P +I H + L C A +ELLD+AY+W HNG + N N T I +D
Sbjct: 496 FIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWN 552
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N S DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W D
Sbjct: 553 RLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVD 612
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 613 GSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 671
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 672 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 731
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ +K+ ++G+AVV IP YYTEYEVKVQAIN VG GPESE+
Sbjct: 732 YKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAV 791
Query: 482 I 482
I
Sbjct: 792 I 792
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 113/273 (41%), Gaps = 31/273 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D+T +C A G P +Y+W+R + L + + QDRY I L I D
Sbjct: 29 DVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQG 88
Query: 63 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 89 AYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPDV 144
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
++ W +D N + R + +G L S + D YSCT + G L
Sbjct: 145 RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFPL 204
Query: 178 HGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
S Y+ L PK+ A ++L C A + +Y WT G+ +
Sbjct: 205 RVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPI--PSYNWTRQGLPL---- 258
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ IN G +L I NA+ D GEY C +
Sbjct: 259 --QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 288
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 768 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 826
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 827 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 879
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 880 AYNAAGEGPESE 891
>gi|236752377|gb|ACQ91625.1| RT02589p [Drosophila melanogaster]
Length = 1354
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 343/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ + ++DRY IQDNVLTI++L ++D
Sbjct: 655 DYNSDVTFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDD 711
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 712 AMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKF 771
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG +IGSGG R+I +G L ISP SRDD GIY+C A+N G DES R+IVL
Sbjct: 772 QWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIR 831
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E P +I H + L C A +ELLD+AY+W HNG + N N T I +D
Sbjct: 832 FIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWN 888
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N S DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W D
Sbjct: 889 RLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVD 948
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 949 GSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 1007
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1008 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1067
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ +K+ ++G+AVV IP YYTEYEVKVQAIN VG GPESE+
Sbjct: 1068 YKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAV 1127
Query: 482 I 482
I
Sbjct: 1128 I 1128
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 39/277 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D+T +C A G P +Y+W+R + L + + QDRY I L I D
Sbjct: 365 DVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQG 424
Query: 63 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 425 AYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPDV 480
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR---- 173
++ W +D N + R + +G L S + D YSCT V + GR
Sbjct: 481 RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---VQTLVSDTGRNGPF 537
Query: 174 --LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L V +Y + ++ P+ +A ++L C A + +Y WT G+ +
Sbjct: 538 FPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI--PSYNWTRQGLPL 594
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ IN G +L I NA+ D GEY C +
Sbjct: 595 ------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 624
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1104 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1162
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1163 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1215
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1216 AYNAAGEGPESE 1227
>gi|195497051|ref|XP_002095937.1| GE25412 [Drosophila yakuba]
gi|194182038|gb|EDW95649.1| GE25412 [Drosophila yakuba]
Length = 1390
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/481 (55%), Positives = 344/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ T+ ++DR+ IQDNVLTI++L ++D
Sbjct: 673 DYNSDVTFICEAFAMPDANYTWYKNAERLDPATI---NRDRFIIQDNVLTIKFLEKDKDD 729
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 730 AMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKF 789
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG +IGSGG R+I +G L I+P SRDD GIY+C A+N G DES R+IVL
Sbjct: 790 QWKKDGQVIGSGGHRRILPSGTLTIAPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIR 849
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E P +I H + L C A +ELLD+AY+W HNG + N N T I ID
Sbjct: 850 FIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEILKN---NHDGTGRIIIDWN 906
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N S DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W D
Sbjct: 907 RLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVD 966
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 967 GSNNGRAIRYYNILGRTNWNRTWVNVSTHVKAREVDRYTSRQQAEVVN-LTPWSAYEFSV 1025
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1026 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPKNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1085
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ +++ ++G+AVV IP YYTEYEVKVQAIN VG GPESE+
Sbjct: 1086 YKVFWKLKGAIEWASDEIRKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEITV 1145
Query: 482 I 482
I
Sbjct: 1146 I 1146
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 39/277 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D+T +C A G P +Y+W+R + L + + QDR+ I L I D
Sbjct: 383 DVTLSCLASGYPTPSYTWYREVYIDDRLEYQKIDPLVQDRFTISGGNLIIYEPKQALDQG 442
Query: 63 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 443 AYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPDV 498
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR---- 173
++ W +D N + R + +G L S + D YSCT V + GR
Sbjct: 499 RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---VQTLVSDTGRNGPF 555
Query: 174 --LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L V +Y + ++ P+ +A ++L C A + +Y WT G+ +
Sbjct: 556 FPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI--PSYNWTRPGLPL 612
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ IN G +L I NA+ D GEY C +
Sbjct: 613 ------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 642
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1122 YTEYEVKVQAINSVGKG-PESEITVIHSAEDMPQVAPQKPIALAYNSTCFNVTWKPIDMS 1180
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1234 AYNAAGEGPESE 1245
>gi|157114683|ref|XP_001652371.1| cell adhesion molecule [Aedes aegypti]
gi|108877190|gb|EAT41415.1| AAEL006958-PA [Aedes aegypti]
Length = 1303
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/482 (54%), Positives = 341/482 (70%), Gaps = 2/482 (0%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D Q+ +T+ CEA +PDV Y+W++N EL++ E ++D++ IQDNVL I +L+PE D
Sbjct: 582 DYQSSVTFLCEASAIPDVNYTWYKNAELMDPENRKF-NKDKFVIQDNVLKINFLDPEDDN 640
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC+A NQLK YSSAQLRVL++KPSFKK+PLESE Y+ GN TI C PEAAP+PK
Sbjct: 641 GMYQCKATNQLKGVYSSAQLRVLSMKPSFKKKPLESEIYSIYNGNTTIECEPEAAPRPKI 700
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
VWKKDGN+IG+GG R++ G L ISP SRDD G+Y+C A+N G+ ESK RLIVL
Sbjct: 701 VWKKDGNVIGTGGHRRMLPTGTLFISPTSRDDEGVYTCVASNSQGVAESKARLIVLQELR 760
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ EQLPPK+ L LRC +E+LDVA++W HNG I D +
Sbjct: 761 FTEQLPPKVIKQIDELLYLRCEVTYDEVLDVAFLWAHNGRIINTYDNMPAYNARFIANYN 820
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
LE+ N + DAGEYEC+ KS V +I +KT V ++GPPG PG V+V+++ KT A+++W D
Sbjct: 821 SLEVHNLTLLDAGEYECIAKSAVNRIVSKTLVFIQGPPGAPGAVKVIDIKKTDASLEWID 880
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGRPI +Y I+ RT WN TW NVS++V +E+DRY GR+ A++ N L P YEF V
Sbjct: 881 GSDNGRPILYYNILGRTTWNKTWVNVSQNVFAQEIDRYNGRRRATVTN-LTPGCGYEFSV 939
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+A N+LG G PS PSP YNT DKPY AP +GGGGGKIGDL+I+W+PL E+QN+ +I+
Sbjct: 940 VAVNDLGIGVPSLPSPLYNTQKDKPYIAPRNVGGGGGKIGDLTITWDPLLPEEQNSIDIH 999
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+F+R N E+ SE LK GNVG AVV IP + YYT+YEVKVQAIND+G GP S++ T
Sbjct: 1000 YKVFYRLPNQREWASEVLKRQGNVGRAVVHIPFDKYYTKYEVKVQAINDLGEGPISDIAT 1059
Query: 482 IW 483
I+
Sbjct: 1060 IY 1061
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 144/355 (40%), Gaps = 42/355 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+ +C A G P TYSWF+ N + + PL + RY L I +D
Sbjct: 292 DVMLSCLAGGFPTPTYSWFKEIYTNDNITVVKLDPLRNT-RYTTSGGNLIIHDPQQIQDQ 350
Query: 62 AMYQCRAKNQLKTRYS-SAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPK 118
Y C A+N S S +L L+ + ++ E G+ +++C+P + P
Sbjct: 351 GTYHCVAENIFGRIISESVELNFGYILEFNLQRSSETGEMNWGK----SLYCDPPQHYPD 406
Query: 119 PKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR--- 173
++ W +D N + R + +G+L S + D YSC NV GR
Sbjct: 407 VRYYWSRDFFPNFVEEDQRVFVSHDGSLYFSSLEIKDRANYSC---NVQSTVSDTGRNGP 463
Query: 174 ---LIVLHGPSYYE-----QLPPKITIA--AHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L V+ P Y + P K A A ++L+L C A + +Y WT R
Sbjct: 464 FFNLQVVAHPHYQDLIFANNFPKKFPEAPVAGKDLRLECMAFGYPV--PSYNWTR---RN 518
Query: 224 GNM-DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 282
GN+ + LE N +L I N++ D GEY C +K+ IS V V+ P
Sbjct: 519 GNLPRFSYLENYN-----RVLVIKNSTANDNGEYICTIKNDRKSISKSVLVSVQMQPNFT 573
Query: 283 GGVQ-VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 336
++ ++ +++S T A T YK + + FN + VI V
Sbjct: 574 IPLKDKIKDYQSSVTFLCEASAIPDVNYTWYKNAELMDPENRKFNKDKFVIQDNV 628
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 37/183 (20%)
Query: 311 HYKIIARTNWNSTWF--------NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
HYK+ R W NV V+ D+Y ++ YE KV
Sbjct: 999 HYKVFYRLPNQREWASEVLKRQGNVGRAVVHIPFDKY--------------YTKYEVKVQ 1044
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAPNI 420
A N+LG G S + Y + D P AP + L+++W P+ R+ I
Sbjct: 1045 AINDLGEGPISDIATIY-SAEDMPQVAPQQTVARSYNSTALNVTWIPVSQTRDAIRGKLI 1103
Query: 421 YYKI-FWRKKNDTE----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+++ +W+K++ E F S T + + + V P +Y+ VKV A N G GP
Sbjct: 1104 GHRLKYWKKEHKEEDAVYFLSRTTRPWA---LIVGLEPDTYYF----VKVMAYNAAGEGP 1156
Query: 476 ESE 478
ESE
Sbjct: 1157 ESE 1159
>gi|195451021|ref|XP_002072734.1| GK13528 [Drosophila willistoni]
gi|194168819|gb|EDW83720.1| GK13528 [Drosophila willistoni]
Length = 1425
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/482 (54%), Positives = 348/482 (72%), Gaps = 7/482 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ T+ ++DRY IQDNVLTI++L ++D
Sbjct: 705 DYNSDVTFICEAFAIPDANYTWYKNAERLDPLTI---NRDRYVIQDNVLTIKFLEKDKDE 761
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+NQLKT +SS+QLRVL++KPSFKK PLE+E YA GN TI C+PEAAP+PKF
Sbjct: 762 GMYQCGAQNQLKTSFSSSQLRVLSMKPSFKKHPLEAEIYAVFNGNTTIVCDPEAAPRPKF 821
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C A+N G DES R+IVL
Sbjct: 822 QWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCIASNQAGTDESHARVIVLQEIR 881
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P +I H + L C A +ELLD+AY+W HNG + N + T I +D
Sbjct: 882 FLQTPPQRIVSKEHDLIYLHCEAIYDELLDIAYVWKHNGEILKN---DHDGTTRIIVDWN 938
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N + ADAG+YECVV+S V +IS KT V++EG PG PGGVQV ++ KT A I+W D
Sbjct: 939 SLTVHNTTMADAGDYECVVQSAVNEISAKTVVVIEGAPGAPGGVQVNQIAKTKAIIEWVD 998
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
GA NGRPI +Y I+ RTNWN TW NVS HV KE+DRYT R++A + N L PWS+YEF V
Sbjct: 999 GANNGRPIRYYNILGRTNWNRTWTNVSTHVQAKEIDRYTMRQQAEVMN-LTPWSSYEFSV 1057
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY P +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1058 TAVNDLGIGTPSAPSPIYSTYEDKPYVPPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1117
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ ++ + + NVG+AVV IP E YYT+Y+VKVQAIN+VG GPESE+VT
Sbjct: 1118 YKVFWKLKGAKEWATDIIMKQENVGVAVVNIPRENYYTQYDVKVQAINNVGKGPESEMVT 1177
Query: 482 IW 483
I+
Sbjct: 1178 IY 1179
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 114/275 (41%), Gaps = 35/275 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED-----QDRYFIQDNVLTIRYLNPERD 60
D++ +C A G P TY W+R E+ ++TL QDRY I L I D
Sbjct: 415 DVSLSCLAGGFPTPTYQWYR--EVYVNDTLEYRRIDPLVQDRYTISGGNLIIYEPKQALD 472
Query: 61 PAMYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAP 117
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 473 QGAYHCVAENKFGRVRSESAHLNFGFIMEFNLKRSSETSEMNWGK----SIFCDPPQHYP 528
Query: 118 KPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
++ W +D N + R + +G L S + D YSCT + G
Sbjct: 529 AVRYYWARDYFPNFVEEDQRVFVSHDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFF 588
Query: 176 VLHGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
L S Y+ L PK+ A +++L C A + +Y WT G N
Sbjct: 589 SLRVTPNSNYQALIFANTFPKVFPEAPVAGEDIRLECMAFGYPI--PSYNWTRQG---QN 643
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ N T G +L I NA+ D GEY C +
Sbjct: 644 LQRNAYTTNY----GRVLIIQNATTNDNGEYTCTI 674
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 104/274 (37%), Gaps = 21/274 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D+ C AFG P +Y+W R G+ L + R I N T D Y
Sbjct: 620 DIRLECMAFGYPIPSYNWTRQGQNLQRNAY-TTNYGRVLIIQNATT-------NDNGEYT 671
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C N KT S + + ++P F PL+ + +VT C A P + W K
Sbjct: 672 CTITNLRKTLVKSIYINI-QMRPEFTI-PLK-DMIKDYNSDVTFICEAFAIPDANYTWYK 728
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ + + R + ++ L I + +D D G+Y C A N S +L VL
Sbjct: 729 NAERLDPLTINRDRYVIQDNVLTIKFLEKDKDEGMYQCGAQNQLKTSFSSSQLRVLSMKP 788
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+++ P + I A N E + W +G +G+ + + G
Sbjct: 789 SFKKHPLEAEIYAVFNGNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRI------LPSG 842
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
L I+ S D G Y C+ + G + VIV
Sbjct: 843 TLIISPTSRDDEGMYTCIASNQAGTDESHARVIV 876
>gi|195113137|ref|XP_002001125.1| GI10608 [Drosophila mojavensis]
gi|193917719|gb|EDW16586.1| GI10608 [Drosophila mojavensis]
Length = 1424
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/482 (55%), Positives = 341/482 (70%), Gaps = 7/482 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ T+ ++DRY IQDNVLTI++L E+D
Sbjct: 705 DYNSDVTFICEAFAIPDANYTWYKNAERLDPLTI---NRDRYIIQDNVLTIKFLEKEKDE 761
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI CNPEAAP+PKF
Sbjct: 762 GMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTTIVCNPEAAPRPKF 821
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C A+N G DES R+IVL
Sbjct: 822 QWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCIASNQAGTDESHARVIVLQEIR 881
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P +I H + L C A +ELLD+AY+W NG + N + T I +D
Sbjct: 882 FVQTPPQRIVSREHDLIYLHCEAAFDELLDIAYVWKRNGEILRN---DHDGTQRIIVDWN 938
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N + D+G+YECVV+S V +ISTKT VI+EG PG PGGVQV+E+ KT A I+W D
Sbjct: 939 RLTVHNTTMRDSGDYECVVQSAVNEISTKTNVIIEGAPGAPGGVQVIEIGKTKAIIEWVD 998
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G NGRPI +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS+YEF V
Sbjct: 999 GVNNGRPIRYYNILGRTNWNRTWVNVSMHVQAREVDRYTSRQQAEVTN-LTPWSSYEFSV 1057
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T D PY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1058 AAVNDLGIGTPSAPSPIYSTYDDVPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1117
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ K N G+AVV IP YYTEYEVKVQAIN +G GPESE V
Sbjct: 1118 YKVFWKLKGALEWASDIRKNQENTGVAVVNIPLNNYYTEYEVKVQAINSIGKGPESETVV 1177
Query: 482 IW 483
I+
Sbjct: 1178 IY 1179
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 102/269 (37%), Gaps = 21/269 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C AFG P +Y+W R G+ L R I N T D Y C N
Sbjct: 625 CMAFGYPIPSYNWTRQGQPLQRNAY-TTSYGRVLIIKNATT-------NDNGQYTCSITN 676
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--- 127
KT S + + ++P F PL+ + +VT C A P + W K+
Sbjct: 677 PRKTLEKSIYINI-QMRPEFTI-PLK-DMIKDYNSDVTFICEAFAIPDANYTWYKNAERL 733
Query: 128 NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ + R I ++ L I + ++ D G+Y C A N S +L VL +++
Sbjct: 734 DPLTINRDRYIIQDNVLTIKFLEKEKDEGMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKH 793
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + I A N + E + W +G +G+ + + G L I+
Sbjct: 794 PLESEIYAVYNGNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRI------LPSGTLIIS 847
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIV 275
S D G Y C+ + G + VIV
Sbjct: 848 PTSRDDEGMYTCIASNQAGTDESHARVIV 876
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 115/279 (41%), Gaps = 43/279 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED-----QDRYFIQDNVLTIRYLNPERD 60
D++ +C A G P +Y W+R E+ ++TL + +DRY I L I D
Sbjct: 415 DVSLSCLAGGYPTPSYEWYR--EVYVNDTLEYKRIDPLVEDRYTISGGNLIIYDPKQALD 472
Query: 61 PAMYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAP 117
Y C A+N+ R SA L ++ + K+ SE G+ IFC+ P+ P
Sbjct: 473 QGAYHCVARNKFGSVRSESAHLNFGFIMEFNLKRSAESSEMNWGKA----IFCDPPQHYP 528
Query: 118 KPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR-- 173
++ W +D N + R + +G L S + D YSCT V + GR
Sbjct: 529 AIRYYWARDYFPNFVEEDQRVFVSHDGALYFSFIETVDRANYSCT---VQTLVSDTGRNG 585
Query: 174 ----LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
L V +Y + ++ P+ IA ++L C A + +Y WT G
Sbjct: 586 PFFPLRVTPNSNYQTLIFANTFPKVFPEAPIAGEE-IRLECMAFGYPI--PSYNWTRQG- 641
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ N T G +L I NA+ D G+Y C +
Sbjct: 642 --QPLQRNAYTTSY----GRVLIIKNATTNDNGQYTCSI 674
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S + + D P AP + ++SW P+
Sbjct: 1154 YTEYEVKVQAINSIGKG-PESETVVIYSAEDMPQVAPQKPFALAYNSTCFNVSWSPIDMS 1212
Query: 414 KQNAPN--IYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
++N I +++ +W+ ++ E L +V + + YY VKV A N
Sbjct: 1213 RENIRGKLIGHRLKYWKTEHQEEDAVYYLSRTTRPWALIVGLQPDTYYF---VKVMAYNA 1269
Query: 471 VGPGPESE 478
G GPESE
Sbjct: 1270 AGEGPESE 1277
>gi|195153264|ref|XP_002017549.1| GL21461 [Drosophila persimilis]
gi|194112606|gb|EDW34649.1| GL21461 [Drosophila persimilis]
Length = 1409
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/481 (55%), Positives = 345/481 (71%), Gaps = 8/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ T+ ++DRY IQDNVLTI++L E+D
Sbjct: 693 DYNSDVTFICEAFSIPDANYTWYKNAERLDPLTI---NRDRYVIQDNVLTIKFLEREKDE 749
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 750 GMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTTIVCDPEAAPRPKF 809
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C+A+N G DES R+IVL
Sbjct: 810 QWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCSASNQAGTDESHARVIVLQEIR 869
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P +I H + L C A +ELLD+AY+W HNG + N N T I ++
Sbjct: 870 FIQTPPQRIVSKEHDLIYLHCEAAYDELLDIAYVWKHNGEILKN---NHDGTERIIVNWN 926
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N + DAG+YECVVKS V +IS+KT+V++EG PG PGGVQV+++ KT A I+W D
Sbjct: 927 RLTVHNTTMRDAGDYECVVKSAVNEISSKTSVVIEGAPGAPGGVQVIQISKTKAIIEWVD 986
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
GA NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 987 GANNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 1045
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP ++GGGGGKIGDL+I+W+PL E+Q++ I
Sbjct: 1046 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPRKVGGGGGKIGDLTITWDPLLPEEQHSHGIR 1105
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ ++ + + N+G+AVV IP YYTEYEVKVQAIN +G GPESEV
Sbjct: 1106 YKVFWKLKGALEWATDEITK-QNMGVAVVNIPLNNYYTEYEVKVQAINSIGKGPESEVAI 1164
Query: 482 I 482
I
Sbjct: 1165 I 1165
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 118/293 (40%), Gaps = 33/293 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+T +C A G P +Y W+R N L + PL QDRY I L I D
Sbjct: 403 DVTLSCLAGGFPTPSYYWYREVYVNDTLEYQKIDPLA-QDRYTISGGNLIIYAPKQALDQ 461
Query: 62 AMYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 462 GAYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPD 517
Query: 119 PKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ W +D N + R + +G L S + D YSCT + G
Sbjct: 518 VRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFA 577
Query: 177 LHGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L S Y+ L PK+ A ++L C A + +Y WT G+ +
Sbjct: 578 LRVTPNSNYQALIFANTFPKVFPEAPVAGSEIRLECMAFGYPI--PSYNWTRKGLPLQ-- 633
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
T N G +L I NA+ D GEY C + + + + ++ P
Sbjct: 634 --RNAYTANY---GRVLIIQNATTNDNGEYSCTISNPRKTLEKSIYINIQMRP 681
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 104/275 (37%), Gaps = 21/275 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++ C AFG P +Y+W R G LPL+ VL I+ D Y
Sbjct: 607 SEIRLECMAFGYPIPSYNWTRKG-------LPLQRNAYTANYGRVLIIQNAT-TNDNGEY 658
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C N KT S + + ++P F PL+ + +VT C + P + W
Sbjct: 659 SCTISNPRKTLEKSIYINI-QMRPEFTI-PLK-DMIKDYNSDVTFICEAFSIPDANYTWY 715
Query: 125 KDGNIIGS---GGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVLHGP 180
K+ + R + ++ L I + R+ D G+Y C A N S +L VL
Sbjct: 716 KNAERLDPLTINRDRYVIQDNVLTIKFLEREKDEGMYQCGAQNQLKTSFSSAQLRVLSMK 775
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+++ P + I A N E + W +G +G+ + +
Sbjct: 776 PSFKKHPLESEIYAVYNGNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRI------LPS 829
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G L I+ S D G Y C + G + VIV
Sbjct: 830 GTLIISPTSRDDEGMYTCSASNQAGTDESHARVIV 864
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W P+
Sbjct: 1141 YTEYEVKVQAINSIGKG-PESEVAIIHSAEDMPQVAPQKPFAMPFNSTCFNVTWSPIDMS 1199
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1200 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1252
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1253 AYNAAGEGPESE 1264
>gi|125777441|ref|XP_001359608.1| GA10588 [Drosophila pseudoobscura pseudoobscura]
gi|54639356|gb|EAL28758.1| GA10588 [Drosophila pseudoobscura pseudoobscura]
Length = 1409
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/481 (55%), Positives = 345/481 (71%), Gaps = 8/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ T+ ++DRY IQDNVLTI++L E+D
Sbjct: 693 DYNSDVTFICEAFSIPDANYTWYKNAERLDPLTI---NRDRYVIQDNVLTIKFLEREKDE 749
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 750 GMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTTIVCDPEAAPRPKF 809
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C+A+N G DES R+IVL
Sbjct: 810 QWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCSASNQAGTDESHARVIVLQEIR 869
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P +I H + L C A +ELLD+AY+W HNG + N N T I ++
Sbjct: 870 FIQTPPQRIVSKEHDLIYLHCEAAYDELLDIAYVWKHNGEILKN---NHDGTERIIVNWN 926
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N + DAG+YECVVKS V +IS+KT+V++EG PG PGGVQV+++ KT A I+W D
Sbjct: 927 RLTVHNTTMRDAGDYECVVKSAVNEISSKTSVVIEGAPGAPGGVQVIQISKTKAIIEWVD 986
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
GA NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 987 GANNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 1045
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP ++GGGGGKIGDL+I+W+PL E+Q++ I
Sbjct: 1046 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPRKVGGGGGKIGDLTITWDPLLPEEQHSHGIR 1105
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ ++ + + N+G+AVV IP YYTEYEVKVQAIN +G GPESEV
Sbjct: 1106 YKVFWKLKGALEWATDEITK-QNMGVAVVNIPLNNYYTEYEVKVQAINSIGKGPESEVAI 1164
Query: 482 I 482
I
Sbjct: 1165 I 1165
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 118/293 (40%), Gaps = 33/293 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+T +C A G P +Y W+R N L + PL QDRY I L I D
Sbjct: 403 DVTLSCLAGGFPTPSYYWYREVYVNDTLEYQKIDPLA-QDRYTISGGNLIIYAPKQALDQ 461
Query: 62 AMYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 462 GAYHCVAENRFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPD 517
Query: 119 PKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ W +D N + R + +G L S + D YSCT + G
Sbjct: 518 VRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFA 577
Query: 177 LHGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L S Y+ L PK+ A ++L C A + +Y WT G+ +
Sbjct: 578 LRVTPNSNYQALIFANTFPKVFPEAPVAGSEIRLECMAFGYPI--PSYNWTRKGLPLQ-- 633
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
T N G +L I NA+ D GEY C + + + + ++ P
Sbjct: 634 --RNAYTANY---GRVLIIQNATTNDNGEYSCTISNPRKTLEKSIYINIQMRP 681
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 104/275 (37%), Gaps = 21/275 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++ C AFG P +Y+W R G LPL+ VL I+ D Y
Sbjct: 607 SEIRLECMAFGYPIPSYNWTRKG-------LPLQRNAYTANYGRVLIIQNAT-TNDNGEY 658
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C N KT S + + ++P F PL+ + +VT C + P + W
Sbjct: 659 SCTISNPRKTLEKSIYINI-QMRPEFTI-PLK-DMIKDYNSDVTFICEAFSIPDANYTWY 715
Query: 125 KDGNIIGS---GGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVLHGP 180
K+ + R + ++ L I + R+ D G+Y C A N S +L VL
Sbjct: 716 KNAERLDPLTINRDRYVIQDNVLTIKFLEREKDEGMYQCGAQNQLKTSFSSAQLRVLSMK 775
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+++ P + I A N E + W +G +G+ + +
Sbjct: 776 PSFKKHPLESEIYAVYNGNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRI------LPS 829
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G L I+ S D G Y C + G + VIV
Sbjct: 830 GTLIISPTSRDDEGMYTCSASNQAGTDESHARVIV 864
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W P+
Sbjct: 1141 YTEYEVKVQAINSIGKG-PESEVAIIHSAEDMPQVAPQKPFAMPFNSTCFNVTWSPIDMS 1199
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1200 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1252
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1253 AYNAAGEGPESE 1264
>gi|195390941|ref|XP_002054125.1| GJ22962 [Drosophila virilis]
gi|194152211|gb|EDW67645.1| GJ22962 [Drosophila virilis]
Length = 1421
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 344/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++NGE L+ ++ ++DRY IQDN+LTI++L ++D
Sbjct: 702 DYNSDVTFICEAFAIPDANYTWYKNGERLDPLSI---NRDRYVIQDNLLTIKFLEKDKDE 758
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+NQLKT YSSAQLRVL++KPSFKKRPLESE YA GN TI C+PEAAP+PKF
Sbjct: 759 GMYQCGAQNQLKTSYSSAQLRVLSMKPSFKKRPLESEIYAVYNGNTTIVCDPEAAPRPKF 818
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C A+N G DES R+IVL
Sbjct: 819 QWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTCVASNQAGSDESHARVIVLQEIR 878
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ ++ P +I H + L C A +ELLD+AY+W HNG + N N T I +D
Sbjct: 879 FVQRPPQRIVSREHDLIYLHCEAAYDELLDIAYVWKHNGEVLRN---NHDGTERIIVDWN 935
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N + D+G+YECVVKS V +IST T VI+EG PG PGGVQV+E+ KT A I+W D
Sbjct: 936 SLTVHNTTMRDSGDYECVVKSAVNEISTTTNVIIEGAPGAPGGVQVIEIGKTKAIIEWVD 995
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G NGRPI +Y I+ RTNWN TW NVS +EVDRYT R++ + + L PWS+YEF V
Sbjct: 996 GVNNGRPIRYYHILGRTNWNRTWTNVSMFQHAREVDRYTSRQQTEVGD-LTPWSSYEFSV 1054
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1055 TAVNDLGIGAPSAPSPIYSTYDDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1114
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K ++ S+ +K+ NVG+AVV IP YYTEYEV+VQAIN VGPGP S+ V
Sbjct: 1115 YKVFWKLKGALDWASDIIKKQENVGVAVVNIPLNNYYTEYEVRVQAINSVGPGPISDTVV 1174
Query: 482 I 482
I
Sbjct: 1175 I 1175
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 104/269 (38%), Gaps = 21/269 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C AFG P Y+W RNG+ PL+ VL IR D Y C N
Sbjct: 622 CMAFGYPIPAYNWTRNGQ-------PLQRNAYTTSYGRVLIIRNAT-TNDNGQYTCSITN 673
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--- 127
KT S + + ++P F PL+ + +VT C A P + W K+G
Sbjct: 674 PRKTLEKSIYINI-QMRPEFTI-PLK-DMIKDYNSDVTFICEAFAIPDANYTWYKNGERL 730
Query: 128 NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ + R + ++ L I + +D D G+Y C A N S +L VL +++
Sbjct: 731 DPLSINRDRYVIQDNLLTIKFLEKDKDEGMYQCGAQNQLKTSYSSAQLRVLSMKPSFKKR 790
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + I A N E + W +G +G+ + + G L I+
Sbjct: 791 PLESEIYAVYNGNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRI------LPSGTLIIS 844
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIV 275
S D G Y CV + G + VIV
Sbjct: 845 PTSRDDEGMYTCVASNQAGSDESHARVIV 873
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 114/276 (41%), Gaps = 37/276 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETL------PLEDQDRYFIQDNVLTIRYLNPER 59
D++ C A G P TY WFR E+ ++TL PL D +RY I L I
Sbjct: 412 DVSLGCLAGGYPTPTYEWFR--EVYVNDTLEYHRIDPLVD-NRYTISGGNLIIYEPKQAL 468
Query: 60 DPAMYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAA 116
D Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+
Sbjct: 469 DQGAYHCIAQNKFGRIRSESAHLNFGFIMEFNLKRSAESSEMNWGK----SIFCDPPQHY 524
Query: 117 PKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
P K+ W +D N + R + +G L S + D YSCT + G
Sbjct: 525 PAIKYYWSRDYFPNFVEEDQRVFVSYDGALYFSFIEIVDRANYSCTVQTLVSDTGRNGPF 584
Query: 175 IVLHGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L S Y+ L PK+ A ++L C A + AY WT NG
Sbjct: 585 FPLRVTPNSNYQALIFANTFPKVFPEAPVAGEEIRLECMAFGYPI--PAYNWTRNG---Q 639
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ N T G +L I NA+ D G+Y C +
Sbjct: 640 PLQRNAYTTSY----GRVLIIRNATTNDNGQYTCSI 671
>gi|194743634|ref|XP_001954305.1| GF18209 [Drosophila ananassae]
gi|190627342|gb|EDV42866.1| GF18209 [Drosophila ananassae]
Length = 1404
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 343/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ ++ ++DRY IQDNVLTI++L ++D
Sbjct: 687 DYNSDVTFICEAFAIPDANYTWYKNAERLDPLSI---NRDRYIIQDNVLTIKFLEKDKDE 743
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+NQLKT +SSAQLRVL++KPSFKK PLE+E YA GN TI CNPEAAP+PKF
Sbjct: 744 GMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLEAEVYAVYNGNTTIVCNPEAAPRPKF 803
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG ++GSGG R+I +G L I+P SRDD GIY+C ATN G DES R+IVL
Sbjct: 804 QWKKDGQLLGSGGHRRILPSGTLTIAPTSRDDEGIYTCIATNQAGTDESHARVIVLQEIR 863
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P +I H + L C A +ELLD+AY+W HNG + N + T I ++
Sbjct: 864 FIQTPPQRIVTKEHDLIYLHCEAAFDELLDIAYVWKHNGEVLKN---DHDGTGRILVEWN 920
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N + DAG+YECVVKS V +I++KT+V++EG PG PGGVQV+++ KT A I+W D
Sbjct: 921 SLTVHNTTMRDAGDYECVVKSAVNEINSKTSVVIEGAPGAPGGVQVIQISKTKAIIEWVD 980
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGRPI +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 981 GSNNGRPIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVTN-LTPWSAYEFSV 1039
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1040 TAVNDLGIGIPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1099
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ +K+ + G+AVV IP YYTEYEVKVQAIN +G GPES +
Sbjct: 1100 YKVFWKLKGALEWASDEIKKQDHTGVAVVNIPLNNYYTEYEVKVQAINSIGKGPESPIAV 1159
Query: 482 I 482
I
Sbjct: 1160 I 1160
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 106/274 (38%), Gaps = 21/274 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D+ C AFG P +Y+W R G+ L + + + R + N T D Y
Sbjct: 602 DIHLECMAFGYPIPSYNWTRQGQHLQRNSY-VTNYGRVLVIQNATT-------NDNGEYT 653
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C N KT S L + ++P F PL+ + +VT C A P + W K
Sbjct: 654 CTITNPHKTLVKSIHLNI-QMRPEFTI-PLK-DMIKDYNSDVTFICEAFAIPDANYTWYK 710
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ + + R I ++ L I + +D D G+Y C A N S +L VL
Sbjct: 711 NAERLDPLSINRDRYIIQDNVLTIKFLEKDKDEGMYQCGAQNQLKTSFSSAQLRVLSMKP 770
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+++ P + + A N + E + W +G +G+ + + G
Sbjct: 771 SFKKHPLEAEVYAVYNGNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRI------LPSG 824
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
L I S D G Y C+ + G + VIV
Sbjct: 825 TLTIAPTSRDDEGIYTCIATNQAGTDESHARVIV 858
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 111/274 (40%), Gaps = 33/274 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+T +C A G P +Y W+R N L + PL+ +DRY I L I D
Sbjct: 397 DVTLSCLAGGFPTPSYLWYREVYVNDTLEYQKIDPLK-EDRYTISGGNLVIYEPKQALDQ 455
Query: 62 AMYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 456 GAYHCVAENKFGRVRSESAHLNFGFIMEFNLKRSGETSEMNWGK----SIFCDPPQHYPD 511
Query: 119 PKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ W ++ N + R + +G L S + D YSCT + G
Sbjct: 512 VRYYWSRNYFPNFVDEDQRVFVSRDGALYFSFIETVDRANYSCTVQTLVSDTGRNGPFFP 571
Query: 177 LHGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L S Y+ L PK+ A ++ L C A + +Y WT G +
Sbjct: 572 LRVTPNSNYQALIFANTFPKVFPEAPVAGDDIHLECMAFGYPI--PSYNWTRQGQHLQRN 629
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ G +L I NA+ D GEY C +
Sbjct: 630 SY-------VTNYGRVLVIQNATTNDNGEYTCTI 656
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P SP ++ D P AP + +++W+P+
Sbjct: 1136 YTEYEVKVQAINSIGKG-PESPIAVIHSAEDMPQVAPQKPIALAFNSTCFNVTWQPIDMS 1194
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1195 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1247
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1248 AYNAAGEGPESE 1259
>gi|347962989|ref|XP_311153.3| AGAP000007-PA [Anopheles gambiae str. PEST]
gi|333467411|gb|EAA06433.3| AGAP000007-PA [Anopheles gambiae str. PEST]
Length = 1332
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/497 (52%), Positives = 345/497 (69%), Gaps = 17/497 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLP---LEDQDRYFIQDNVLTIRYLNPE 58
D Q+ +++ CEA+ +PDV Y+W++NGEL+ ++ ++D+Y IQDN+L I YL+PE
Sbjct: 600 DFQSSVSFLCEAYAMPDVNYTWYKNGELMEEDSATGGGRLNRDKYTIQDNLLKINYLDPE 659
Query: 59 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
D MYQC+A NQLK YS+AQLRVL++KPSFKKRPLESE Y+ GN TI C PEAAP
Sbjct: 660 EDNGMYQCKATNQLKGVYSAAQLRVLSMKPSFKKRPLESEIYSIANGNTTIRCEPEAAPT 719
Query: 119 PKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
PK VWKKDGN+IGSGG RKI+ G L ISP SRDD G Y+C A+N GM ESK RLIVL
Sbjct: 720 PKIVWKKDGNVIGSGGHRKIYPTGTLHISPTSRDDEGTYTCIASNTQGMAESKARLIVLQ 779
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG-VRIGNMDLNEL------ 231
+ EQLPPK L LRC ++LLDVA++WTHNG + G+ D +E
Sbjct: 780 ELRFTEQLPPKQIKQIGEMLFLRCDVTYDQLLDVAFVWTHNGQLLTGHDDADEQRLRQQP 839
Query: 232 -----ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
+ I I LE+ N + D GEYECV KS+V +I ++ TV+++GPPG PG V+
Sbjct: 840 IGPAPDGARIRIHYNTLEVHNLTLVDGGEYECVAKSSVNRIVSRATVLIQGPPGAPGAVK 899
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
V+++ KT A ++WT+G NGRPI +Y I+ RTNWN TW NVS HV+ +E DRY GR++A+
Sbjct: 900 VIDIKKTEALLEWTNGNDNGRPILYYNILGRTNWNRTWVNVSTHVVAQEADRYNGRRQAT 959
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ N L PW YE +A N+LG G PS PSP Y+T D+PY AP +GGGGGKIGDL+I+
Sbjct: 960 VTN-LTPWCGYEI-CVAVNDLGLGTPSLPSPMYSTLKDRPYIAPRNVGGGGGKIGDLTIT 1017
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
W+PL +QN+ +++Y++F+R E+ SE L+ GNVG AV+ +P++ YYT YEVKVQ
Sbjct: 1018 WDPLAPHEQNSIDVHYRVFYRLHGQREWASEELQRQGNVGKAVIHVPTDKYYTRYEVKVQ 1077
Query: 467 AINDVGPGPESEVVTIW 483
A+ND+G GP SE V I+
Sbjct: 1078 AVNDLGVGPISEPVEIF 1094
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 37/297 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETL----PLEDQDRYFIQDNVLTIRYLNPERDP 61
D+T +C A G P Y+W++ + ++ T+ PL + R+ + L I + D
Sbjct: 310 DVTLSCLAGGYPTPRYTWYKEEYVKDNLTVIQIDPLRNA-RHTVSGGNLIIHRPSQNLDQ 368
Query: 62 AMYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPK 118
Y C A+N K S QL L+ + ++ P + E G+ + C P+ P
Sbjct: 369 GTYHCTAQNAYGKILSESVQLNFGYILEFNLQRAPEKGEENWGKA----LVCEEPQHYPD 424
Query: 119 PKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGR 173
KF W ++ N + R + +G+L S + D YSCT + G +
Sbjct: 425 VKFYWSRNYFPNFVYEDQRVFVSHDGSLYFSSLEVMDRANYSCTVMSTVSDTGRNGPFFE 484
Query: 174 LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
L V P Y + + PK+ +A ++++L C + + +Y WT R GN
Sbjct: 485 LSVSPSPHYQDLIFANTFPKAFPKVPLAG-KDVRLECMTYGYPV--ASYNWTR---RNGN 538
Query: 226 M-DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
+ L+ LE N +L I NA+ D GEY C ++ I+ + V+ P
Sbjct: 539 LPRLSRLENYN-----RVLLIQNATVNDNGEYVCTARNGKKSITQSIFLNVQMEPNF 590
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 29/179 (16%)
Query: 311 HYKIIARTNWNSTWF--------NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
HY++ R + W NV + VI D+Y R YE KV
Sbjct: 1032 HYRVFYRLHGQREWASEELQRQGNVGKAVIHVPTDKYYTR--------------YEVKVQ 1077
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAPNI 420
A N+LG G S P + + D P AP + L+++W P+ RE I
Sbjct: 1078 AVNDLGVGPISEPVEIF-SAEDMPQVAPQQTIARSFNSTALNVTWVPVSQTRETIRGKLI 1136
Query: 421 YYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+++ +W+K+++ E L +V + + YY VKV A N G GPESE
Sbjct: 1137 GHRLKYWKKEHNEEDSVYYLSRTTRPWALIVGLEPDTYYF---VKVMAYNAAGEGPESE 1192
>gi|170066102|ref|XP_001868120.1| contactin [Culex quinquefasciatus]
gi|167862726|gb|EDS26109.1| contactin [Culex quinquefasciatus]
Length = 977
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/482 (53%), Positives = 338/482 (70%), Gaps = 2/482 (0%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D Q+ +T+ CEA +PDV Y+W++N +L++ E+ ++D+Y IQDN+L I +L+PE D
Sbjct: 289 DFQSSVTFLCEATAIPDVNYTWYKNAQLMDPESSKF-NKDKYIIQDNILKINFLDPEEDN 347
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC+A NQLK YSSAQLRVL++KPSFKK+PLESE Y+ GN TI C PEAAP+PK
Sbjct: 348 GMYQCKASNQLKGVYSSAQLRVLSMKPSFKKKPLESEIYSIYNGNTTIECEPEAAPRPKI 407
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
VWKKDGN+IGSGG RKI G L ISP SRDD G+Y+C A+N G+ ESK RLIVL
Sbjct: 408 VWKKDGNVIGSGGHRKILPVGTLYISPTSRDDEGVYTCVASNTQGVAESKARLIVLQELR 467
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ EQLPPK+ L LRC +E+LDVA++W HNG I + D ++
Sbjct: 468 FIEQLPPKLIKQIDEMLYLRCDVSYDEVLDVAFLWAHNGRLINSDDDVFRNNSRFFVNNN 527
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
LE+ N + D+GEYEC+VKS V ++ +KT V V+GPPG PG ++V+++ KT A ++W D
Sbjct: 528 HLEVHNLTLLDSGEYECIVKSAVNQVVSKTNVFVQGPPGAPGAIKVIDIKKTDAVLEWID 587
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I Y I+ RT WN TW N+SE+V+ +E+DRY GRK A + N L P YEF V
Sbjct: 588 GSDNGRQIMFYNILGRTTWNKTWVNISENVVAQEIDRYNGRKRAVVNN-LTPGCGYEFSV 646
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+A N+LG G PS PSP YNT DKPY P IGGGGGKIGDL+I+W PL E+QN+ +I+
Sbjct: 647 MAVNDLGGGTPSLPSPLYNTQKDKPYLFPKNIGGGGGKIGDLTITWTPLLPEEQNSIDIH 706
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+F+R EF ++ LK GN G AVV IPS+ YYT+YEVKVQAIND+G GP S++
Sbjct: 707 YKVFYRLLGQKEFATDVLKNRGNTGKAVVHIPSDKYYTKYEVKVQAINDLGDGPVSDIAV 766
Query: 482 IW 483
I+
Sbjct: 767 IY 768
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 23/276 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D+ C AFG P +Y+W R L ++ LE +R VL IR + D Y
Sbjct: 204 DVRLECMAFGYPVPSYNWTRKSGNLPRQSY-LESYNR------VLVIRN-STANDNGEYT 255
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C KN K S + L + ++P+F PL+ + + +VT C A P + W K
Sbjct: 256 CTIKNDRKF-LSKSILVNIQMEPNFTI-PLKDKLKDFQ-SSVTFLCEATAIPDVNYTWYK 312
Query: 126 DGNIIGSGGR-----RKIFENGNLLISPVS-RDDSGIYSCTATNVHGMDESKGRLIVLHG 179
+ ++ + I ++ L I+ + +D+G+Y C A+N S +L VL
Sbjct: 313 NAQLMDPESSKFNKDKYIIQDNILKINFLDPEEDNGMYQCKASNQLKGVYSSAQLRVLSM 372
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
+++ P + I + N E +W +G IG+ ++ +
Sbjct: 373 KPSFKKKPLESEIYSIYNGNTTIECEPEAAPRPKIVWKKDGNVIGSGGHRKI------LP 426
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G L I+ S D G Y CV +T G +K +IV
Sbjct: 427 VGTLYISPTSRDDEGVYTCVASNTQGVAESKARLIV 462
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 44/352 (12%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQD-----RYFIQDNVLTIRYLNPERDPAMY 64
+C A G P TYSW+R EL ++ + + D RY L I +D Y
Sbjct: 3 SCLAGGYPIPTYSWYR--ELYTNDNVTVVKLDPLKNSRYTTSGGSLIIHDPQQIQDQGTY 60
Query: 65 QCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKF 121
C A+N+ K S +L L+ + ++ E G+ +++C+P + P ++
Sbjct: 61 HCIAENKYGKIISESVELNFGYILEFNLQRSSENGEMNWGK----SLYCDPPQHYPDVRY 116
Query: 122 VWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR------ 173
W + N + R + +G+L S + D YSC NV GR
Sbjct: 117 YWSRTYFPNFVEEDQRVFVSHDGSLYFSSLEIKDRANYSC---NVQSTVSDTGRNGPFFN 173
Query: 174 LIVLHGPSY----YEQLPPKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L V+ P Y + PKI A ++++L C A + +Y WT + GN+
Sbjct: 174 LQVVSHPHYQDLIFANTFPKIYPEAPVAGKDVRLECMAFGYPV--PSYNWTR---KSGNL 228
Query: 227 DLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
LE+ N +L I N++ D GEY C +K+ +S V ++ P +
Sbjct: 229 PRQSYLESYN-----RVLVIRNSTANDNGEYTCTIKNDRKFLSKSILVNIQMEPNFTIPL 283
Query: 286 Q-VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 336
+ ++ ++S T A T YK + S+ FN +++I +
Sbjct: 284 KDKLKDFQSSVTFLCEATAIPDVNYTWYKNAQLMDPESSKFNKDKYIIQDNI 335
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP-- 411
++ YE KV A N+LG G S + Y + D P AP + L++SW +P
Sbjct: 743 YTKYEVKVQAINDLGDGPVSDIAVIY-SAEDMPQVAPQQTIARSFNSTALNVSWVSVPQT 801
Query: 412 REKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
RE I +++ +W+K++ E L N +V + + YY VK N
Sbjct: 802 RETIRGKMIGHRLKYWKKEHKEEDAVYYLSRSINSWALIVGLEPDTYYF---VKCMIYNG 858
Query: 471 VGPGPESE 478
G GPESE
Sbjct: 859 AGEGPESE 866
>gi|321454618|gb|EFX65782.1| hypothetical protein DAPPUDRAFT_303516 [Daphnia pulex]
Length = 1134
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/499 (52%), Positives = 345/499 (69%), Gaps = 16/499 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MD DL WTCEAFG+PDV Y W RNG++L+ +L D++R+ I++NVL IR L+P+RD
Sbjct: 390 MDRGEDLLWTCEAFGIPDVNYLWLRNGQVLDPLSLEQGDRERFEIRENVLIIRKLDPDRD 449
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
AMYQC+A NQ+ RYSS QLR+L +KPSF K+PLES+ YA +GGNVTI CNPEAAP+PK
Sbjct: 450 QAMYQCKASNQIAERYSSGQLRILDIKPSFAKKPLESDIYAADGGNVTIACNPEAAPRPK 509
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+VW+KDG IGSGGRR I +G+LLI+PVS +D G ++CTA N G D S GR+IVL GP
Sbjct: 510 YVWRKDGFAIGSGGRRIILPSGHLLINPVSMEDVGNFTCTAENRFGSDSSTGRVIVLRGP 569
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI----GNMDLNE-LETPN 235
+ EQ P +I + QLRC A E +LD+AYIW HNG+ + +D ++ LE +
Sbjct: 570 VFVEQPPNRILTTVGQTEQLRCRASAEGILDLAYIWKHNGITLRFDSSPVDFHDNLEAAH 629
Query: 236 -INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
I G LEI N + AGEYECV K++VG+ISTKT + V GPPG GGVQV+E+ +S
Sbjct: 630 YIRSREGSLEINNITLGQAGEYECVAKTSVGRISTKTHLFVYGPPGAVGGVQVLELTSSS 689
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
A ++WTDGATNG PI Y + RTNWN TW ++ ++ K+VDR T RKEA + N + P+
Sbjct: 690 AVLRWTDGATNGDPIRLYMVEGRTNWNQTWSVLAMNITAKDVDRLTSRKEAQLINTVSPY 749
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
STYEF++ A N LGYG S PSPQYNT D+ +Q P+ +GGGGGK GDL+I+W P ++
Sbjct: 750 STYEFRISAANTLGYGPSSIPSPQYNTRPDRIFQPPTNVGGGGGKTGDLTITWTPFVGQQ 809
Query: 415 QNAPNIYYKIFWRK--------KNDTEFQSETLKEYGNVGIAVVRIP--SEFYYTEYEVK 464
QNA YYK+FWR+ ++E+QS+ +K + G+ V + +YYT Y+VK
Sbjct: 810 QNASGTYYKVFWRRLAGVDADVTEESEYQSQIVKHSRSAGLFVATVDRNRRYYYTPYKVK 869
Query: 465 VQAINDVGPGPESEVVTIW 483
VQ NDVG G ES V+I+
Sbjct: 870 VQGCNDVGCGQESPEVSIY 888
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 112/282 (39%), Gaps = 27/282 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D+ C AFG P Y+W R G L + + + + +R + V D Y
Sbjct: 306 DVRLECVAFGYPVPNYNWTRKGAPL-PKGVVITNYNRILVLPKVKV-------EDMGEYV 357
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
CRA N + S + V P F PL + + G ++ C P ++W +
Sbjct: 358 CRATNDKVSIEGSVTVSV-QATPVFTI-PL-GDMHMDRGEDLLWTCEAFGIPDVNYLWLR 414
Query: 126 DGNII-------GSGGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESKGRLIVL 177
+G ++ G R +I EN L+I + D D +Y C A+N S G+L +L
Sbjct: 415 NGQVLDPLSLEQGDRERFEIRENV-LIIRKLDPDRDQAMYQCKASNQIAERYSSGQLRIL 473
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+ + P + I A + + + E Y+W +G IG+ I
Sbjct: 474 DIKPSFAKKPLESDIYAADGGNVTIACNPEAAPRPKYVWRKDGFAIGSGGR------RII 527
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-EGP 278
+ G L I S D G + C ++ G S+ VIV GP
Sbjct: 528 LPSGHLLINPVSMEDVGNFTCTAENRFGSDSSTGRVIVLRGP 569
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 119/300 (39%), Gaps = 49/300 (16%)
Query: 7 LTWTCEAFGVPDVTYSW----FRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE--RD 60
+T +C A G P + W F + +L++ PL R+ + +L I NPE +D
Sbjct: 102 VTLSCIANGYPTPEFQWYKEDFESDQLVSKRIDPLL-MPRHTVSGGLLII--TNPEEIKD 158
Query: 61 PAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPK 118
Y C A NQ + S S QL + KR E+ E I+C+P + P
Sbjct: 159 RGKYHCVASNQYGSIVSESVQLSFGFIGEFNLKRSSEN---GLEHWGKAIYCDPPQYFPD 215
Query: 119 PKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ W +D N + R + +GNL S + D G YSC NV S GR
Sbjct: 216 IQYYWVRDVFPNFVEEDSRTFVSFDGNLYFSSLENIDRGRYSC---NVQSTVSSNGR--- 269
Query: 177 LHGPSY---------YEQLP-----PKITIAAHR---NLQLRCSAHTEELLDVAYIWTHN 219
+GP + Y+QL PK A R +++L C A + + Y WT
Sbjct: 270 -NGPFFSVEVRQHPNYQQLKFPNNFPKSFPEAPRVGEDVRLECVAFGYPVPN--YNWTRK 326
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + + N N +L + D GEY C + I TV V+ P
Sbjct: 327 GAPLP----KGVVITNYN---RILVLPKVKVEDMGEYVCRATNDKVSIEGSVTVSVQATP 379
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 108/524 (20%), Positives = 195/524 (37%), Gaps = 81/524 (15%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++T C P Y W ++G + S R + L I ++ E D +
Sbjct: 494 GNVTIACNPEAAPRPKYVWRKDGFAIGS------GGRRIILPSGHLLINPVSME-DVGNF 546
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A+N+ + S+ ++ VL ++ P T G+ + + E ++WK
Sbjct: 547 TCTAENRFGSDSSTGRVIVLRGPVFVEQPPNRILTTVGQTEQLRCRASAEGILDLAYIWK 606
Query: 125 KDGNIIGSGGRRKIFEN------------GNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
+G + F + G+L I+ ++ +G Y C A G +K
Sbjct: 607 HNGITLRFDSSPVDFHDNLEAAHYIRSREGSLEINNITLGQAGEYECVAKTSVGRISTKT 666
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA------------------Y 214
L V P + + L+L S+ D A
Sbjct: 667 HLFVYGPPG---------AVGGVQVLELTSSSAVLRWTDGATNGDPIRLYMVEGRTNWNQ 717
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG--------- 265
W+ + I D++ L + + L I S E+ +T+G
Sbjct: 718 TWSVLAMNITAKDVDRLTSRK---EAQL--INTVSPYSTYEFRISAANTLGYGPSSIPSP 772
Query: 266 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD--GATNGRPITHYKI----IARTN 319
+ +T+ I + P V TI WT G T+YK+ +A +
Sbjct: 773 QYNTRPDRIFQPPTN----VGGGGGKTGDLTITWTPFVGQQQNASGTYYKVFWRRLAGVD 828
Query: 320 WNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
+ T + + I K R G A+++ N ++ Y+ KV N++G G+ SP
Sbjct: 829 ADVTEESEYQSQIVKH-SRSAGLFVATVDRNRRYYYTPYKVKVQGCNDVGCGQ-ESPEVS 886
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEP--LPREKQNAPNIYYKI-FWRKKNDTEFQ 435
+ D P AP+++ L+++W P L R++ I ++I +WR+++ +
Sbjct: 887 IYSAEDVPQVAPNQVAARAFNSTSLNVTWLPMDLSRKQMRGNMIGFRIKYWRRQDKEDAS 946
Query: 436 SETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
L + N + V +P +Y+ V+V A N G GP+SE
Sbjct: 947 VFYLSRSTRNEALIVGLMPDTYYW----VRVMAYNGAGEGPQSE 986
>gi|357617701|gb|EHJ70941.1| contactin [Danaus plexippus]
Length = 671
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/424 (60%), Positives = 319/424 (75%), Gaps = 5/424 (1%)
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
MYQC AKNQL+T+YS+ QLRVL+LKPSFKK PLESETY EGGNVT+ CNPEAAPKP F
Sbjct: 1 MYQCEAKNQLRTKYSTGQLRVLSLKPSFKKHPLESETYGSEGGNVTLRCNPEAAPKPTFT 60
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
WKKD +IG+GG+R I ENGNL+I +SRDD G+Y+C A N +G DES+GRLIVL P +
Sbjct: 61 WKKDNIVIGAGGKRFITENGNLIIRQLSRDDEGVYTCVAKNQYGTDESRGRLIVLRAPRF 120
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN-MDLNELETPNINIDGG 241
E+LPP+IT + + L C+A + +LD AY+W HNG+R+ DL I IDGG
Sbjct: 121 IERLPPRITTQVGQVIFLHCNAEIDSMLDTAYLWNHNGIRMKEAADL--YADKRIKIDGG 178
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I + S +D GEYEC+VKS +G+IST+T + +EGPPG PGGVQV + ++S T++WTD
Sbjct: 179 ELTIFDVSLSDVGEYECIVKSAIGRISTRTQLRIEGPPGPPGGVQVSNIQQSSVTLEWTD 238
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-EVDRYTGRKEASIENVLVPWSTYEFK 360
NGRPIT+Y + RT WNSTWF +SE V E+DRY GRK A++ L+PWS YEF+
Sbjct: 239 SNPNGRPITNYVVTGRTQWNSTWFVLSESVTNVFEIDRYNGRKRATVTTTLMPWSVYEFR 298
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPSSPSPQ++T ADKPY +P IGGGGGKIGDL+I W PLPR QN P I
Sbjct: 299 VQAVNSLGIGEPSSPSPQFSTQADKPYHSPFNIGGGGGKIGDLTIKWTPLPRSLQNGPGI 358
Query: 421 YYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
YYKIFWR+ N + EFQS +LKEYGN+G+ VV +P ++++T Y +KVQA ND+G GPESEV
Sbjct: 359 YYKIFWRRNNTEVEFQSLSLKEYGNIGMHVVHVPLDYFFTPYNIKVQAFNDIGAGPESEV 418
Query: 480 VTIW 483
VTI+
Sbjct: 419 VTIY 422
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 198/523 (37%), Gaps = 94/523 (17%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++T C P T++W ++ ++ + R+ ++ L IR L+ + D +Y
Sbjct: 43 GNVTLRCNPEAAPKPTFTWKKDNIVIGA------GGKRFITENGNLIIRQLSRD-DEGVY 95
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE--AAPKPKFV 122
C AKNQ T S +L VL ++ P T G+ + + CN E + ++
Sbjct: 96 TCVAKNQYGTDESRGRLIVLRAPRFIERLPPRITTQVGQV--IFLHCNAEIDSMLDTAYL 153
Query: 123 WKKDGNIIGSGG-----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W +G + +R + G L I VS D G Y C + G ++ +L +
Sbjct: 154 WNHNGIRMKEAADLYADKRIKIDGGELTIFDVSLSDVGEYECIVKSAIGRISTRTQLRI- 212
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN------------ 225
E P N+Q S+ T E D NG I N
Sbjct: 213 ------EGPPGPPGGVQVSNIQQ--SSVTLEWTDS----NPNGRPITNYVVTGRTQWNST 260
Query: 226 -MDLNELETPNINID---GGLLEITNASFADAGEYECVVKST----VGKIST---KTTVI 274
L+E T ID G + YE V++ +G+ S+ + +
Sbjct: 261 WFVLSESVTNVFEIDRYNGRKRATVTTTLMPWSVYEFRVQAVNSLGIGEPSSPSPQFSTQ 320
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWF------ 325
+ P P + TI+WT NG P +YKI R N F
Sbjct: 321 ADKPYHSPFNIGGGGGKIGDLTIKWTPLPRSLQNG-PGIYYKIFWRRNNTEVEFQSLSLK 379
Query: 326 ---NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382
N+ HV+ +D + ++ Y KV A N++G G P S +
Sbjct: 380 EYGNIGMHVVHVPLDYF--------------FTPYNIKVQAFNDIGAG-PESEVVTIYSA 424
Query: 383 ADKPYQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTE----FQ 435
D P AP ++ L+++W P+ R++ I +++ +W++ N E +
Sbjct: 425 EDMPQVAPQQVYSRSFNSTSLNVTWNPIDQSRDRLRGKLIGHRLKYWKQANKEEECIYYL 484
Query: 436 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
S T + N + V P +YY VKV A N G GPESE
Sbjct: 485 SRTTR---NWALIVGLQPDTYYY----VKVMAFNSAGEGPESE 520
>gi|195568167|ref|XP_002102089.1| GD19723 [Drosophila simulans]
gi|194198016|gb|EDX11592.1| GD19723 [Drosophila simulans]
Length = 536
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/380 (55%), Positives = 267/380 (70%), Gaps = 7/380 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ + ++DRY IQDNVLTI++L ++D
Sbjct: 158 DYNSDVTFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDD 214
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 215 AMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKF 274
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG +IGSGG R+I +G L I+P SRDD GIY+C A+N G DES R+IVL
Sbjct: 275 QWKKDGQVIGSGGHRRILPSGTLTIAPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIR 334
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E P +I H + L C A +ELLD+AY+W HNG + N N T I +D
Sbjct: 335 FIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWN 391
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N S DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W D
Sbjct: 392 RLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVD 451
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 452 GSNNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 510
Query: 362 IAGNELGYGEPSSPSPQYNT 381
A N+LG G PS+PSP Y+T
Sbjct: 511 TAVNDLGIGTPSAPSPIYST 530
>gi|427788459|gb|JAA59681.1| Putative contactin 5 [Rhipicephalus pulchellus]
Length = 1216
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/481 (46%), Positives = 302/481 (62%), Gaps = 10/481 (2%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D + LTWTCEAFG+P+V Y W+RNGE LN+E+ + + RY + DN+L I +N D
Sbjct: 497 DEGSRLTWTCEAFGIPEVVYHWYRNGEKLNTESSD-DMRARYKVDDNILVIEDIN-RADE 554
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A N L T +S+AQLRV+T+ P+F K PL++E YA E GN+TI C PEAAP P+F
Sbjct: 555 GMYQCSATNSLGTSFSTAQLRVVTMAPNFAKYPLDTEMYAAEEGNITIPCRPEAAPYPEF 614
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W+K+G GGR ++ NG L I PV R+D G Y+C N +G S G L+VL P
Sbjct: 615 TWRKNGYTFALGGRTQMLSNGYLRIDPVRREDEGNYTCVVKNQYGTASSTGALVVLSLPR 674
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E PPK+ +L C A +LD++YIW HN +RI +E + G
Sbjct: 675 SVEAPPPKVVATVGSLEELHCHALAPHMLDLSYIWLHNDLRI---HPHEWPQYGVGYRPG 731
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I N SFA+AG Y C+ K++VGK+ T ++V GPPG PG V + TS I+W D
Sbjct: 732 YLVIYNVSFAEAGHYTCIAKTSVGKVFANTELLVLGPPGQPGAVLGHSFNATSGFIEWAD 791
Query: 302 GATNGRPITHYKIIARTNWNSTW---FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
G ++G IT Y I RTN N+TW NV+ K+ +GR+E + NVL PWS YE
Sbjct: 792 GTSHGSHITSYAIEGRTNHNATWRELLNVTYAPPSKQ-HHASGRREVELGNVLSPWSKYE 850
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N LG G+PS PSPQYNT D+PY AP +GGGGGK G L+I+W PL E+ N+P
Sbjct: 851 FRVTAANILGVGQPSDPSPQYNTAVDRPYIAPRNVGGGGGKAGSLTITWTPLSPEEWNSP 910
Query: 419 NIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
++Y++++R D +E + + L++ GNVG+ VV + E Y++ YEV+VQA+N VG GP S
Sbjct: 911 EVWYRVYYRPSGDRSEPRKKDLRKLGNVGLYVVPVGEENYFSPYEVQVQAVNVVGEGPIS 970
Query: 478 E 478
E
Sbjct: 971 E 971
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 125/299 (41%), Gaps = 45/299 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D++ C A G P TY WF+ N ELLN PL + R+ D LTI Y + RD
Sbjct: 207 DISLRCVAEGNPPPTYKWFKEEYANDELLNIYIDPLSN-GRFTQTDGTLTIHYPDQTRDR 265
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN----VTIFCN-PEAA 116
Y C A+N +Y R + L F ++ AG+ G ++ C+ P+
Sbjct: 266 GKYHCMAEN----KYGKVLSRSVALGFGFIGE--FNKNRAGDSGKEFWGKSVSCDPPQFN 319
Query: 117 PKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR- 173
P + W ++ + + R + +GNL S + ++D YSC NV S GR
Sbjct: 320 PAVHYFWVRNAFPDFVQEDPRVFVSHDGNLYFSSLEKNDDANYSC---NVQSRISSTGRT 376
Query: 174 -----LIV--------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
L+V L P+ + + P+ +A + +++L C A+ + Y WT G
Sbjct: 377 GPYFHLLVEPASSGQKLLFPNNFPKSFPEAPLAGN-DVRLECIAYGYPV--PKYNWTRVG 433
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M I+ G +L + D GEY C+ + I T+ ++ P
Sbjct: 434 ---GPMPAGA----QISSHGRVLLLPRVRVEDLGEYVCIASADQDSIRKGVTLTIQAMP 485
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 129/522 (24%), Positives = 196/522 (37%), Gaps = 90/522 (17%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++T C P ++W +NG T L + + + + L I + E D
Sbjct: 597 EGNITIPCRPEAAPYPEFTWRKNGY-----TFALGGRTQ-MLSNGYLRIDPVRRE-DEGN 649
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKF 121
Y C KNQ T S+ L VL+L S + P + A G + C+ A +
Sbjct: 650 YTCVVKNQYGTASSTGALVVLSLPRSVEAPP--PKVVATVGSLEELHCHALAPHMLDLSY 707
Query: 122 VWKKDGNII--------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
+W + I G G + G L+I VS ++G Y+C A G +
Sbjct: 708 IWLHNDLRIHPHEWPQYGVG-----YRPGYLVIYNVSFAEAGHYTCIAKTSVGKVFANTE 762
Query: 174 LIVLHGP--------------SYYEQLPPKITIAAHRNL-----QLRCSAHTEELLDVAY 214
L+VL P S + + + +H + +A ELL+V Y
Sbjct: 763 LLVLGPPGQPGAVLGHSFNATSGFIEWADGTSHGSHITSYAIEGRTNHNATWRELLNVTY 822
Query: 215 I---WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 271
H+ ++L + +P + +T A+ G+ S +
Sbjct: 823 APPSKQHHASGRREVELGNVLSPWSKYE---FRVTAANILGVGQ--------PSDPSPQY 871
Query: 272 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSE 329
V+ P P V S TI WT ++ WNS W+ V
Sbjct: 872 NTAVDRPYIAPRNVGGGGGKAGSLTITWTP-------------LSPEEWNSPEVWYRVYY 918
Query: 330 HVIG--KEVDRYTGRKEASIENVLVP------WSTYEFKVIAGNELGYGEPSSPSPQYNT 381
G E + RK ++ +VP +S YE +V A N +G G S P Y+
Sbjct: 919 RPSGDRSEPRKKDLRKLGNVGLYVVPVGEENYFSPYEVQVQAVNVVGEGPISEPEIVYSA 978
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSET 438
P PS + L+++W PL REK I ++I +WR D E S
Sbjct: 979 EG-MPQVQPSGVYAVPHNSTALNVTWNPLDITREKIRGRLIGHRIKYWRSDLDRELDSLI 1037
Query: 439 LKEYG--NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
L + G N G+ V P+ TEY V V A N+ G GPESE
Sbjct: 1038 LLKRGIENWGLIVGLQPN----TEYRVAVMAYNEAGSGPESE 1075
>gi|391347544|ref|XP_003748020.1| PREDICTED: contactin-like [Metaseiulus occidentalis]
Length = 1223
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/501 (44%), Positives = 304/501 (60%), Gaps = 24/501 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL----- 55
D A LTW CEAFG+PD++Y W+ NG LN +T L +RY I +N+L I +
Sbjct: 487 FDEGATLTWECEAFGIPDISYEWYYNGRPLN-DTSNLHRLNRYIINENILIINQVARGGE 545
Query: 56 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 115
D MYQC A+NQ+ + +SSAQL+V++L P+F K PLE+E YA E GN+TI C PEA
Sbjct: 546 GEGGDEGMYQCMARNQIGSAFSSAQLKVISLMPNFWKYPLETELYAAEEGNLTISCRPEA 605
Query: 116 APKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
AP P+F+WKKDG +G+ GGR I NG L I+PV +D G Y+C A N++G D S GR
Sbjct: 606 APFPEFLWKKDGYNVGTSGGGRVYIMPNGFLRINPVRIEDEGNYTCIAKNIYGQDMSSGR 665
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
LIVL P Y+ PP+++ + + L C A LLD++Y WTHN ++I ET
Sbjct: 666 LIVLPPPIAYQSPPPRLSAVVNDTVTLLCEAKASPLLDLSYTWTHNDLKIDWRRSPLYET 725
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 293
+ G L I N +FA+AG Y+C+ K+++G++ +T +IV GPPG G ++ ++T
Sbjct: 726 KYSMPEAGNLVIYNVTFAEAGFYKCIAKTSIGRVEMRTELIVIGPPGPVGAIKAENANET 785
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--- 350
SA + WTD ATNGR Y I RTN N TW ++ + G DR+ R EA
Sbjct: 786 SALLSWTDSATNGRHFLGYLIEGRTNHNHTWRLIANYTTG---DRF--RLEAPFRAARRA 840
Query: 351 -------LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
L P+S YEF++ A N+LG GE S PSP T D+PY AP+ +GGGGGK G L
Sbjct: 841 YQLPRWSLSPYSGYEFRIAAYNDLGIGEFSEPSPVVTTQEDRPYNAPNNVGGGGGKAGSL 900
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+++WE L E NAP ++Y ++WR ++ EF + LKEYGNVG+ VV + E Y+ Y
Sbjct: 901 TVTWEQLHTEDWNAPQVWYIVYWRPASEKGEFNKQNLKEYGNVGLHVVNVGEENYFRPYT 960
Query: 463 VKVQAINDVGPGPESEVVTIW 483
V VQA+N G GP S V ++
Sbjct: 961 VMVQAMNYKGAGPTSREVEVY 981
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 182/517 (35%), Gaps = 72/517 (13%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DP 61
+ +LT +C P + W ++G + + R +I N +NP R D
Sbjct: 594 EGNLTISCRPEAAPFPEFLWKKDGYNVGTS-----GGGRVYIMPNGFL--RINPVRIEDE 646
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C AKN SS +L VL +++ P + VT+ C +A+P
Sbjct: 647 GNYTCIAKNIYGQDMSSGRLIVLPPPIAYQSPPPRLSAVVND--TVTLLCEAKASPLLDL 704
Query: 122 VWKKDGNIIGSGGRRKIF--------ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
+ N + RR E GNL+I V+ ++G Y C A G E +
Sbjct: 705 SYTWTHNDLKIDWRRSPLYETKYSMPEAGNLVIYNVTFAEAGFYKCIAKTSIGRVEMRTE 764
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE-----LLDVAYIWTHNGVRIGNM-- 226
LIV+ P + + L SA L++ H I N
Sbjct: 765 LIVIGPPGPVGAIKAENANETSALLSWTDSATNGRHFLGYLIEGRTNHNHTWRLIANYTT 824
Query: 227 -DLNELETPNINIDGGLLEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGP 278
D LE P ++ S + YE + + +G+ S + V+ + P
Sbjct: 825 GDRFRLEAP-FRAARRAYQLPRWSLSPYSGYEFRIAAYNDLGIGEFSEPSPVVTTQEDRP 883
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNG------------RPITHYKIIARTNWNSTWFN 326
P V S T+ W T RP + + N + N
Sbjct: 884 YNAPNNVGGGGGKAGSLTVTWEQLHTEDWNAPQVWYIVYWRPASEKGEFNKQNLKE-YGN 942
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
V HV+ EN P Y V A N G G S Y+ A +P
Sbjct: 943 VGLHVVN-----------VGEENYFRP---YTVMVQAMNYKGAGPTSREVEVYSAEA-RP 987
Query: 387 YQAPSRIGGGGGKIGDLSISWEPL--PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYG 443
P+ + L+++W PL REK I ++I +WR D E L G
Sbjct: 988 EVQPTGVYAHAYNSTALNVTWTPLDVTREKIRGRLIGHRIKYWRSNADAEVDFLVLLNRG 1047
Query: 444 --NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
N + V P+ TEY V V A ND G GPESE
Sbjct: 1048 LRNWALVVGLQPN----TEYRVAVMAYNDAGSGPESE 1080
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 131/342 (38%), Gaps = 51/342 (14%)
Query: 11 CEAFGVPDVTYSW----FRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P TY W FR +++ E PLE DR+ D L I + P D Y C
Sbjct: 203 CVASGYPTPTYKWYREVFRGDDVIAREIDPLE-ADRFTQTDGTLIISHPEPNIDRGKYHC 261
Query: 67 RAKNQL-KTRYSSAQLRVLTLKPSFKKR-PLESETYAGEGGNVTIFCN-PEAAPKPKFVW 123
A+N + + +A L + KKR P Y G+ +I C+ P+ PK + W
Sbjct: 262 IAENVFGRVKSRTATLGFGYIGEFNKKRAPDTGREYWGK----SIACDEPQHYPKVNYYW 317
Query: 124 KKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR------LI 175
++ N + R + + +L S + + D+G YSC NV GR +I
Sbjct: 318 TRNSFPNFVEEDRRVFVSHDAHLYFSSLEKIDNGNYSC---NVQSDISDTGRTGPFFPVI 374
Query: 176 VLHGPSYYEQLPPK-------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
V G S + L P TI A ++L C A+ + Y WT G++
Sbjct: 375 VEPGSSGQKLLFPNNFPKSFPQTILAGDRVRLECIAYGYPV--PRYNWTRVN---GDLPY 429
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
+ +L I D GEY C + I + V+ P ++
Sbjct: 430 GSY----VESHERVLIIPKVRVEDEGEYVCSAITNQQSIQKSHHLSVQALPEFTIPLE-N 484
Query: 289 EVHKTSATIQWTDGA-----------TNGRPITHYKIIARTN 319
++ AT+ W A NGRP+ + R N
Sbjct: 485 QIFDEGATLTWECEAFGIPDISYEWYYNGRPLNDTSNLHRLN 526
>gi|241114451|ref|XP_002400195.1| Contactin-5, putative [Ixodes scapularis]
gi|215493066|gb|EEC02707.1| Contactin-5, putative [Ixodes scapularis]
Length = 1185
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/428 (46%), Positives = 263/428 (61%), Gaps = 9/428 (2%)
Query: 45 IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG 104
+ +N+ I L + D MYQC A N L + YSSAQLR++T+ P+F+K PLESETYA E
Sbjct: 514 VDNNIFIIEELVRKEDEGMYQCCATNTLGSTYSSAQLRIVTMAPNFEKYPLESETYAAEE 573
Query: 105 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164
GNVTI C PEAAP P+F W++DG + +GGR ++ NG L I PV R+D G Y+CTA N
Sbjct: 574 GNVTIACRPEAAPFPEFTWRRDGYAVPTGGRLQVLNNGFLRIHPVRREDEGNYTCTAKNQ 633
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+G S GRLIVL P E PP++ +L C A +LD++YIW HN +R+
Sbjct: 634 YGTATSGGRLIVLPPPRSLEAPPPRLQAHVGGTEELMCQAIAPHMLDLSYIWLHNDLRLH 693
Query: 225 NMDLNE--------LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276
D + + T + + G L I N +FA+AG Y C+ K++VGK+ T ++V
Sbjct: 694 PQDWPQYGVVSFFWIRTNLLALGPGYLVIYNVTFAEAGRYTCIAKTSVGKVLANTELLVI 753
Query: 277 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 336
GPPG PG V + TS I+W DG +GRPIT Y I RTN N TW + E
Sbjct: 754 GPPGPPGAVLGSNFNATSGFIEWADGTNHGRPITSYAIEGRTNHNGTWRELINITYAAER 813
Query: 337 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 396
GR+ + VL PWS YEF+VIAGN+LG G+PS PSPQYNT D PY AP +GGG
Sbjct: 814 RMTPGRRGVELGPVLSPWSKYEFRVIAGNDLGVGQPSDPSPQYNTALDAPYVAPRNVGGG 873
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 455
GGK G L+I+WE L E+ N+P I+Y++++R K D +E + + L+ GNVG+ VV + E
Sbjct: 874 GGKAGSLTITWERLSPEEWNSPEIWYQVYYRPKGDRSEPRKKNLRNLGNVGLYVVPVGEE 933
Query: 456 FYYTEYEV 463
YY YEV
Sbjct: 934 NYYFPYEV 941
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 129/330 (39%), Gaps = 58/330 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFR----NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+++ C A G P Y WF+ + +LLN PL + RY D L I + +D
Sbjct: 183 EISLRCVASGYPPPVYKWFKEEYYDDKLLNIYIDPLSN-GRYTQTDGTLVIHDPDQAKDR 241
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN----VTIFCN-PEAA 116
Y C A+N +Y R ++L F ++ AG+ G +I C+ P+
Sbjct: 242 GKYHCTAEN----KYGRVLSRSVSL--GFGYIGEFNKNRAGDSGKEYWGKSIACDPPQFN 295
Query: 117 PKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
P + W ++ + R + +GNL S + + D+ YSC NV S GR
Sbjct: 296 PSVHYFWVRNSFPEFVEEDNRVFVSHDGNLYFSSLEKIDNANYSC---NVQSKISSTGRT 352
Query: 175 --------------IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
L P+ + + P+ +A + ++L C A+ + Y WT G
Sbjct: 353 GPYFRVTVDPASSGQKLLFPNNFPKSFPEAPLAGNE-VRLECVAYGYPV--PKYNWTRRG 409
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI------STKTTVI 274
G M I G +L + D GEY C + I S + T
Sbjct: 410 ---GPMP----RGARIESRGRVLLLPRIRVEDMGEYVCSASTGQDAIHKAVTLSVQATAK 462
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
++ P PG +Q S+ I+WT+ T
Sbjct: 463 IDISPMSPGTLQ-------SSAIRWTNMHT 485
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 108/290 (37%), Gaps = 56/290 (19%)
Query: 17 PDVTYSWFRNGELLNSETLP--LEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLK 73
P V Y W RN + P +E+ +R F+ D L L + D A Y C ++++
Sbjct: 296 PSVHYFWVRN-------SFPEFVEEDNRVFVSHDGNLYFSSLE-KIDNANYSCNVQSKIS 347
Query: 74 TRYSSAQLRVLTLKP---------------SFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
+ + +T+ P SF + PL G V + C P
Sbjct: 348 STGRTGPYFRVTVDPASSGQKLLFPNNFPKSFPEAPLA-------GNEVRLECVAYGYPV 400
Query: 119 PKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMDESKGRLIVL 177
PK+ W + G + G R I G +L+ P R +D G Y C+A S G+ +
Sbjct: 401 PKYNWTRRGGPMPRGAR--IESRGRVLLLPRIRVEDMGEYVCSA--------STGQDAIH 450
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSA------HTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ Q KI I+ L+ SA HT L +Y W + + LN
Sbjct: 451 KAVTLSVQATAKIDISPMSPGTLQSSAIRWTNMHT-RLAYWSYSWPPKNWLL--LSLNVT 507
Query: 232 ETPNINIDGGLLEITN-ASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+D + I D G Y+C +T+G S + ++ P
Sbjct: 508 FCHCCQVDNNIFIIEELVRKEDEGMYQCCATNTLGSTYSSAQLRIVTMAP 557
>gi|269785101|ref|NP_001161506.1| contactin-like protein precursor [Saccoglossus kowalevskii]
gi|268053975|gb|ACY92474.1| axonin [Saccoglossus kowalevskii]
Length = 1048
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/491 (37%), Positives = 267/491 (54%), Gaps = 35/491 (7%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPER 59
D + T+ CEA G +TY W+RNGE + T R+ +N LTI L +
Sbjct: 344 DIRGSATFECEATGTEPITYKWYRNGEQFTTRT-------RHSFSNNFKRLTINSLQ-DA 395
Query: 60 DPAMYQCRAKNQL----KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 115
D AMYQC+A N L + YS+ QL VL + PSF PL A GN+TI CNPEA
Sbjct: 396 DSAMYQCKAANTLLDKERAIYSTGQLTVLAIAPSFADTPLLQNQPAARNGNITIECNPEA 455
Query: 116 APKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
APKP F W + I +GG I +NG+L I V D G Y+C A N G D+S+GR
Sbjct: 456 APKPDFTWLHNNRPISITNGGHYTILDNGHLFIQNVQDSDGGKYTCIARNYIGEDQSEGR 515
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L++ G + Q P ++I + L+C A + +LD+ YIW +GV+I +D ++
Sbjct: 516 LVIRDG-TVITQWPLAMSIEVGDDATLKCRATADPVLDLTYIWLLDGVQIDVLD----DS 570
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 293
+ G LEI +A +G Y C +T+ ++S VI++G PG P GV+ ++
Sbjct: 571 HYARLRDGNLEIIDAELRQSGVYTCTAHTTIDEVSKSAEVIIKGAPGPPAGVRASDITTN 630
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
S ++W++G +N PI Y + +RT W ++R ++ N L P
Sbjct: 631 SCQLRWSEGFSNNDPIKTYTVQSRTKEEPEWI----------IEREGIPDLSASLNSLSP 680
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
WS Y+F+V A N G GEPS PSP+Y+T DKPY P +GGGGGK GDL I+W+PL R+
Sbjct: 681 WSNYQFRVSAVNSYGRGEPSLPSPEYSTHEDKPYHEPRNVGGGGGKTGDLRITWDPLSRQ 740
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVG 472
QNAP + Y ++W+K N E S+ + VG+ V+ +P+ Y +Y+V+V N G
Sbjct: 741 DQNAPGLGYYVYWKKANSREEYSKGVVNDEAVGVYTVKGVPT---YVQYDVRVGVFNAKG 797
Query: 473 PGPESEVVTIW 483
GP S + TI+
Sbjct: 798 DGPNSTISTIY 808
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
N ++ CEA G P TY W +N +N + +R + + LTI + D
Sbjct: 44 NLPSVSIECEADGYPRPTYKWKKNDVDVN-----ILADNRLTLMEGKLTIAEPR-QSDAG 97
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCN-PEAAPK 118
+QC A N Y ++ TL F R +S A EG + CN P+A P
Sbjct: 98 SFQCFASND----YGVVLSQIATLSFGFVDPFPRQGQSPKVATEGNGFMLSCNAPDAYPG 153
Query: 119 PKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
F W KD N + R I NGN+ + V + D G YSC N+ +D + G
Sbjct: 154 LSFYWVKDIEFNFVRESERLMIASNGNMYFAKVDQGDQGDYSCIVKNI--LDAASG 207
>gi|443687293|gb|ELT90327.1| hypothetical protein CAPTEDRAFT_180331 [Capitella teleta]
Length = 1108
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/495 (38%), Positives = 260/495 (52%), Gaps = 21/495 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D DLTW C+A G P Y W +N E+L+++T+P ED+ R + +NVL IR L+PERD
Sbjct: 389 DIGTDLTWRCQAGGNPSPQYHWLKNTEILSNDTIPEEDRGRIIVNNNVLIIRNLDPERDN 448
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-- 119
MYQC+A N L T YS+ +LRVL+ P+FKK ++ +A GN T++C PEAAP P
Sbjct: 449 GMYQCQATNMLGTEYSTGELRVLSFAPNFKKYLMQPNQFATALGNTTLYCRPEAAPYPSA 508
Query: 120 -KFVWKKDGNII----GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
+ +W K+G + G R + NGN+ IS V + D G+Y C +N +G E+ G L
Sbjct: 509 EEIIWYKNGVPLNPGSGENDRVQQLPNGNVFISNVQQSDQGVYKCHVSNSYGEAETVGNL 568
Query: 175 IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
VL + PP T I +R L C A +LDV Y+W H G+M L E E
Sbjct: 569 TVLSKSTTTLTQPPLDTNIQVNRTNFLSCMASYNPVLDVTYVWYH-----GDM-LVEFEK 622
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVH 291
GGL I A F G Y C V S+ G + TV + GPP P GV Q V
Sbjct: 623 VFRLYVGGLY-IMKAQFEHQGRYTCRVHSSSGMTAASATVQILGPPSEPAGVFIQSATVT 681
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNSTW--FNVSEHVIGKEVDRYTGRKEASIEN 349
+S +QW T RPI Y I W W SE + ++ +E N
Sbjct: 682 TSSVVVQWKASGTTTRPIISYVIEGYNFWEGFWRILFTSEFISALDMQLDEDERETMHFN 741
Query: 350 V--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
V L P+STY+ ++ A N G PS+PS ++ T A KP +AP +GGGGG++GDL+I+W
Sbjct: 742 VTDLRPYSTYQLRIRAENSYGTSIPSTPSQEFTTWAVKPDRAPEEVGGGGGRVGDLTITW 801
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+PL + N P I Y++ + + D E+ G++ V + +Y EYEV QA
Sbjct: 802 KPLEEWEYNGPGIGYRVRRKNRGDDEWDKTFDIPGGDISRYVDLVGEPNFYREYEVTAQA 861
Query: 468 INDVGPGPESEVVTI 482
ND G GP S + I
Sbjct: 862 YNDQGFGPVSPISII 876
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 129/311 (41%), Gaps = 36/311 (11%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSE---TLPLEDQDRYFIQDNVLTIRYLNPE 58
DN W D+ Y+W + E+++ + LPL +Q R VL I +
Sbjct: 290 DNVRLECWASGTSRYDDLIYTWDKV-EMVDGKPHRELPLPNQARLTDHMRVLLIDDIQ-L 347
Query: 59 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
D Y+C + +S +L KP F + +A G ++T C P
Sbjct: 348 YDEGTYRCNVRRLHGQSHSETVDLILQGKPYFTLN--LKDQFADIGTDLTWRCQAGGNPS 405
Query: 119 PKFVWKKDGNIIGSG-----GRRKIFENGNLLI--SPVSRDDSGIYSCTATNVHGMDESK 171
P++ W K+ I+ + R +I N N+LI + D+G+Y C ATN+ G + S
Sbjct: 406 PQYHWLKNTEILSNDTIPEEDRGRIIVNNNVLIIRNLDPERDNGMYQCQATNMLGTEYST 465
Query: 172 GRLIVL-HGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLDV-AYIWTHNGVRI----G 224
G L VL P++ + L P A N L C IW NGV + G
Sbjct: 466 GELRVLSFAPNFKKYLMQPNQFATALGNTTLYCRPEAAPYPSAEEIIWYKNGVPLNPGSG 525
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST--------KTTVIVE 276
D + + PN N+ I+N +D G Y+C V ++ G+ T K+T +
Sbjct: 526 ENDRVQ-QLPNGNV-----FISNVQQSDQGVYKCHVSNSYGEAETVGNLTVLSKSTTTLT 579
Query: 277 GPPGLPGGVQV 287
PP L +QV
Sbjct: 580 QPP-LDTNIQV 589
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 119/300 (39%), Gaps = 41/300 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY-LNPERDPAMYQCRAK 69
C P+ +SW R E P + RY + + VL I E D YQC A
Sbjct: 88 CTVDAYPEAEFSWTRERAGDKVEIDP-NTEPRYTMINGVLIIHEPAADEEDDGKYQCTAT 146
Query: 70 NQLKTRYS---SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKK 125
N+ + +S + L P + P+ + Y ++ C+P A P+ + W K
Sbjct: 147 NKFGSIFSNTIALDFGYLQDFPKSPRAPVSAIAYQW----ASVECSPPAHYPEVLYTWYK 202
Query: 126 DG--NIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL------- 174
D N I + IF +G L S ++ DD G Y C G ++G++
Sbjct: 203 DDIYNFIRPELKPYIFISNDGRLYFSEITADDVGAYYCLIYK-PGQALAEGKVSMPTEVK 261
Query: 175 IVLHGPSYYEQLPPKI----------TIAAHRNLQLRC-SAHTEELLDVAYIWTHNGVRI 223
+V P YE P+I + N++L C ++ T D+ Y W +
Sbjct: 262 VVEGSPGIYE---PEIGSGFPLVYPSSPMIGDNVRLECWASGTSRYDDLIYTWDKVEMVD 318
Query: 224 GNMDLNELETPN---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT-VIVEGPP 279
G EL PN + +L I + D G Y C V+ G+ ++T +I++G P
Sbjct: 319 GKPH-RELPLPNQARLTDHMRVLLIDDIQLYDEGTYRCNVRRLHGQSHSETVDLILQGKP 377
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 108 TIFCNPEAAPKPKFVWKKDG-----NIIGSGGRRKIFENGNLLISPVSRD--DSGIYSCT 160
+I C +A P+ +F W ++ I + R NG L+I + D D G Y CT
Sbjct: 85 SIICTVDAYPEAEFSWTRERAGDKVEIDPNTEPRYTMINGVLIIHEPAADEEDDGKYQCT 144
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCS--AHTEELLDVAY 214
ATN G S + Y + P ++ A++ + CS AH E+L Y
Sbjct: 145 ATNKFGSIFSNTIALDF---GYLQDFPKSPRAPVSAIAYQWASVECSPPAHYPEVL---Y 198
Query: 215 IWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKS-----TVGKIS 268
W + I N EL+ P I I + G L + + D G Y C++ GK+S
Sbjct: 199 TWYKDD--IYNFIRPELK-PYIFISNDGRLYFSEITADDVGAYYCLIYKPGQALAEGKVS 255
Query: 269 TKTTV-IVEGPPGL 281
T V +VEG PG+
Sbjct: 256 MPTEVKVVEGSPGI 269
>gi|410920627|ref|XP_003973785.1| PREDICTED: contactin-3-like [Takifugu rubripes]
Length = 1027
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 242/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+A+L W C+A G P +YSW +NGE L +E R I++ L+I LN D M
Sbjct: 336 EANLFWECKANGKPKPSYSWLKNGEQLAAE-------GRIQIENGALSIAALN-LSDSGM 387
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ YSSAQL VL PSF K PL++ A G VT+ C PEA P +W
Sbjct: 388 YQCVAENKHGVIYSSAQLMVLASPPSFSKSPLKALLKARTGSEVTLECKPEAWPPAISLW 447
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R + NG L I+ +R D+G Y+C A N G + G+L++ P+
Sbjct: 448 KKGNEILQRAERMTLLPNGTLRIANATRQDAGSYTCVAKNQFGTASTTGKLLITE-PTRI 506
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P I + L C ++ LDV++ W NG I D N E ++ G L
Sbjct: 507 TMRPTNTEIIVGESAVLPCQIASDPALDVSFSWAFNGQLIDFQRDGNHFERVGGSVSGDL 566
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N + G+Y C++ + V +ST ++V+GPPG P V V E+ ++A + WT G
Sbjct: 567 M-IRNIQLSHGGKYVCLIDTDVESLSTSAILVVKGPPGPPDKVTVEEITDSTAQLSWTPG 625
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
NG PIT Y I ART + W + + G + L W YEF+V+
Sbjct: 626 RDNGSPITGYIIQARTPFTVGW-----QAVDTVPEVINGNLLTATVVGLNAWVEYEFRVV 680
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS S + T P AP+ +GGGGG +L I+WEP+P E QN Y
Sbjct: 681 ARNTVGLGEPSPASTKTRTEDSIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGDGFGY 740
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R + + G +G V R + ++ +EVKV A N+ G GP S + T+
Sbjct: 741 IIAFRPLGLVTWTRAAISTPG-IGRYVFRNDTIPAFSPFEVKVGAYNNRGEGPFSSIATV 799
Query: 483 W 483
+
Sbjct: 800 Y 800
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 120/274 (43%), Gaps = 29/274 (10%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T TCEA G P Y W NG +++ P D R+ + L I L+ ++D +YQC
Sbjct: 50 TITCEAEGSPPPQYRWSLNGTVID----PGNDYRRH-MSGGSLIISDLDKDQDTGVYQCT 104
Query: 68 AKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP---KFVW 123
A N S A LR L +FK + S + EG V + C P +++
Sbjct: 105 AVNTWGAVLSRRASLRFAYLD-NFKSQADRSAVHVREGQGVVLLCGPPVNSGELTYAWIF 163
Query: 124 KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKGRLIVLHGP 180
+ + + RR I E GNL ++ V R D G Y+C N D+ S +VL
Sbjct: 164 NEYPHFVQQDSRRFISQETGNLYVAKVERSDVGNYTCVVNNTVTGDKVLSSPTPLVLRTD 223
Query: 181 SYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ PKI + A ++L C A + ++++ T +GV ++++
Sbjct: 224 GVMGEYEPKIEVHFPESVPAAKESAVRLECFALGNPVPEISWRRT-SGVPFP----SKVK 278
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
N N +LEI N DAG YECV ++ GK
Sbjct: 279 MKNSN---AVLEIPNFQQEDAGTYECVAENWRGK 309
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 189/508 (37%), Gaps = 78/508 (15%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAM 63
+++T C+ P W + E+L + +R + N T+R N R D
Sbjct: 429 SEVTLECKPEAWPPAISLWKKGNEIL-------QRAERMTLLPNG-TLRIANATRQDAGS 480
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y C AKNQ T ++ +L ++T RP +E GE + + A F W
Sbjct: 481 YTCVAKNQFGTASTTGKL-LITEPTRITMRPTNTEIIVGESAVLPCQIASDPALDVSFSW 539
Query: 124 KKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIV 176
+G +I FE +G+L+I + G Y C T+V + S ++V
Sbjct: 540 AFNGQLIDFQRDGNHFERVGGSVSGDLMIRNIQLSHGGKYVCLIDTDVESLSTSA--ILV 597
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VAYIWT---HNGVRIG------- 224
+ GP P K+T+ EE+ D WT NG I
Sbjct: 598 VKGPP---GPPDKVTV--------------EEITDSTAQLSWTPGRDNGSPITGYIIQAR 640
Query: 225 ---NMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVI 274
+ ++T I+G LL T EYE V ++TVG STKT
Sbjct: 641 TPFTVGWQAVDTVPEVINGNLLTATVVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRTE 700
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHV 331
P P V K+ I W + NG Y I R TW +
Sbjct: 701 DSIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGDGF-GYIIAFRPLGLVTWTRAAIST 759
Query: 332 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
G + RY R + + +S +E KV A N G G SS + Y+ + P AP
Sbjct: 760 PG--IGRYVFRND-----TIPAFSPFEVKVGAYNNRGEGPFSSIATVYSA-EEVPSVAPK 811
Query: 392 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAV 449
R+ + + WE LP + Y ++W K DT + Y V I
Sbjct: 812 RVRTRSVSAVQIEVIWEALPALPERVLG-YEVVYWEDDTKPDTVGKVRISGNYTVVNITG 870
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPGPES 477
++ + +Y + V A N GPGP+S
Sbjct: 871 LKASTVYY-----LSVAAFNTAGPGPQS 893
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 107/275 (38%), Gaps = 27/275 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQL---K 73
++TY+W + N ++ R FI + ER D Y C N + K
Sbjct: 156 ELTYAW-----IFNEYPHFVQQDSRRFISQETGNLYVAKVERSDVGNYTCVVNNTVTGDK 210
Query: 74 TRYSSAQLRVLT------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
S L + T +P + ES A E V + C P P+ W++
Sbjct: 211 VLSSPTPLVLRTDGVMGEYEPKIEVHFPESVPAAKESA-VRLECFALGNPVPEISWRRTS 269
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ + N L I ++D+G Y C A N G + ++GRL H ++
Sbjct: 270 GVPFPSKVKMKNSNAVLEIPNFQQEDAGTYECVAENWRGKNAARGRL-SFHAKPHWLLTM 328
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
++ NL C A+ + +Y W NG ++ I I+ G L I
Sbjct: 329 ADTALSVEANLFWECKANGKP--KPSYSWLKNGEQLAAEG-------RIQIENGALSIAA 379
Query: 248 ASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGL 281
+ +D+G Y+CV ++ G I S+ +++ PP
Sbjct: 380 LNLSDSGMYQCVAENKHGVIYSSAQLMVLASPPSF 414
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 108 TIFCNPEAAPKPKFVWKKDGNIIGSGGR-RKIFENGNLLISPVSRD-DSGIYSCTATNVH 165
TI C E +P P++ W +G +I G R+ G+L+IS + +D D+G+Y CTA N
Sbjct: 50 TITCEAEGSPPPQYRWSLNGTVIDPGNDYRRHMSGGSLIISDLDKDQDTGVYQCTAVNTW 109
Query: 166 GMDES-KGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV-R 222
G S + L + ++ Q + + + + L C ++ Y W N
Sbjct: 110 GAVLSRRASLRFAYLDNFKSQADRSAVHVREGQGVVLLCGPPVNS-GELTYAWIFNEYPH 168
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV--GKISTKTTVIVEGPPG 280
D I+ + G L + +D G Y CVV +TV K+ + T +V G
Sbjct: 169 FVQQDSRRF----ISQETGNLYVAKVERSDVGNYTCVVNNTVTGDKVLSSPTPLVLRTDG 224
Query: 281 LPGGVQ-VVEVH 291
+ G + +EVH
Sbjct: 225 VMGEYEPKIEVH 236
>gi|148228227|ref|NP_001085050.1| contactin 4 precursor [Xenopus laevis]
gi|47940323|gb|AAH72368.1| MGC84491 protein [Xenopus laevis]
Length = 1028
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 248/481 (51%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P +Y+W +NG+ L S + R I LTI +N D M
Sbjct: 331 EENILWECKASGRPKPSYTWLKNGQRLQS-------KGRLQIDHGSLTITSVNIS-DSGM 382
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ T YSSA+LRV+ + P F K ++ T GG+V I C P+A+PKP W
Sbjct: 383 YQCLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLGKVGGSVLIECKPKASPKPSTTW 442
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK ++ R I ++G L IS +++ D+G Y+CTA+N G S G L+V P+
Sbjct: 443 KKGKELLKESPRISILDDGTLKISNLTKADAGSYTCTASNHFGTASSTGTLVV-KDPTQV 501
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+++ W NG I D E G
Sbjct: 502 LVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLIDFQKDGEHFERVGGQDSAGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + AG+Y C+V ++V K+S +IV GPPG P + V + +T+A + W G
Sbjct: 562 LMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPPDALTVEVIAETTAQLSWMPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI Y + ART ++ W VS + + VD G+ +S N L PW YEF+VI
Sbjct: 622 VDNHSPIIMYSVQARTPFSVGWQAVS--TVPEVVD---GKSFSSTVNGLSPWVEYEFRVI 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G GEPS PS + T P P+ + GGGG G+L I+WEP+P E QN Y
Sbjct: 677 AINEIGIGEPSPPSDRRRTKDALPEVTPANVSGGGGSKGELVITWEPVPEELQNGGGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + +T+ + V R S ++ YEVKV N+ G GP S++ +
Sbjct: 737 VVAFRPFGTISWM-QTVVASADSSRYVYRNESLPPFSPYEVKVGVYNNKGEGPFSQLTVV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 121/295 (41%), Gaps = 34/295 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQD-RYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKT 74
++ Y+W N E P QD R F+ L I + P D Y C N +
Sbjct: 151 ELVYAWIFN------EYPPFVQQDNRRFVSQVTGNLYIAKVEPS-DAGNYTCVVTNIITN 203
Query: 75 RYSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
LTL+ P + ES + A +G V + C P P W++
Sbjct: 204 TRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVSSA-KGSTVKLECFALGNPVPTITWRR 262
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG I RR +G L I ++D+G Y C A N G + +G+L PS+ +
Sbjct: 263 ADGKPISRKVRRH-RSSGVLEIPNFQQEDAGPYECVAENTRGKNMVRGQLTYFAPPSWVQ 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
++ IA N+ C A +Y W NG R+ + + ID G L
Sbjct: 322 KI-NDAHIAIEENILWECKASGRP--KPSYTWLKNGQRLQSKG-------RLQIDHGSLT 371
Query: 245 ITNASFADAGEYECVVKSTVGKI--STKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
IT+ + +D+G Y+C+ ++ G I S + VI GP G V+ V + K ++
Sbjct: 372 ITSVNISDSGMYQCLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLGKVGGSV 426
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 110/288 (38%), Gaps = 30/288 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNPERDPAMYQ 65
L C+ G P W NG L++ E QD RY + D L I + RD +Q
Sbjct: 45 LRLVCDVQGHPKPVVRWRVNGTLMD------EAQDYRYRVLDRSLIIASPDRNRDVGTFQ 98
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP---KFV 122
C A N L T S + SF+ R S EG + + C P A ++
Sbjct: 99 CEATNSLGTILSREAYVQFSYLDSFQTR-TRSTVSVREGQGMVLLCGPPAHSGELVYAWI 157
Query: 123 WKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL---- 177
+ + + RR + + GNL I+ V D+G Y+C TN+ G L
Sbjct: 158 FNEYPPFVQQDNRRFVSQVTGNLYIAKVEPSDAGNYTCVVTNIITNTRELGPSTPLTLRT 217
Query: 178 ------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ P P ++ A ++L C A + + W + + +
Sbjct: 218 DGVMGEYEPKIEVHFPESVSSAKGSTVKLECFALGNPVPTIT--WRRADGKPISRKVRRH 275
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ G+LEI N DAG YECV ++T GK + + PP
Sbjct: 276 RS------SGVLEIPNFQQEDAGPYECVAENTRGKNMVRGQLTYFAPP 317
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
V +P+ PL+SE + + C+ + PKP W+ +G ++ R ++ +
Sbjct: 26 VFAQEPTNINFPLDSEDR-----TLRLVCDVQGHPKPVVRWRVNGTLMDEAQDYRYRVLD 80
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQ 199
++ SP D G + C ATN G S+ + + S+ + +++ + +
Sbjct: 81 RSLIIASPDRNRDVGTFQCEATNSLGTILSREAYVQFSYLDSFQTRTRSTVSVREGQGMV 140
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
L C AH+ EL+ Y W N N + G L I +DAG Y
Sbjct: 141 LLCGPPAHSGELV---YAWIFNEYPPFVQQDNRRFVSQVT---GNLYIAKVEPSDAGNYT 194
Query: 258 CVVKSTV 264
CVV + +
Sbjct: 195 CVVTNII 201
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 174/493 (35%), Gaps = 47/493 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P + +W + ELL E + D L I L + D Y C A N
Sbjct: 430 CKPKASPKPSTTWKKGKELLK------ESPRISILDDGTLKISNLT-KADAGSYTCTASN 482
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
T S+ L V+ P + GE + + + + F W +G +I
Sbjct: 483 HFGTASSTGTL-VVKDPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLI 541
Query: 131 GSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+ FE G+L+I + +G Y C + LIV P
Sbjct: 542 DFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPP 601
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ L ++ L + + + +G ++ + P + +DG
Sbjct: 602 DALTVEVIAETTAQLSWMPGVDNHSPIIMYSVQARTPFSVGWQAVSTV--PEV-VDGKSF 658
Query: 244 EITNASFADAGEYECVVKST----VGKIS-------TKTTVIVEGPPGLPGGVQVVEVHK 292
T + EYE V + +G+ S TK + P + GG K
Sbjct: 659 SSTVNGLSPWVEYEFRVIAINEIGIGEPSPPSDRRRTKDALPEVTPANVSGGGG----SK 714
Query: 293 TSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
I W + NG Y + R +W V + RY R E+
Sbjct: 715 GELVITWEPVPEELQNGGGF-GYVVAFRPFGTISWMQTV--VASADSSRYVYRNES---- 767
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+S YE KV N G G S + Y+ ++P +AP+ + D+ +SW
Sbjct: 768 -LPPFSPYEVKVGVYNNKGEGPFSQLTVVYSA-EEEPGRAPAGVFSRSLTAWDIEVSWIA 825
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+P Y++ + K+N+ E + L+ GN ++ +T Y + ++A N
Sbjct: 826 VPGSLSKGRIQGYEVRYWKQNEKEQNARKLRTLGNQ--TSTKLSHLQGHTLYHLNIRAYN 883
Query: 470 DVGPGPESEVVTI 482
G GP S V +
Sbjct: 884 SAGTGPASTSVNV 896
>gi|213982949|ref|NP_001135636.1| contactin 4 precursor [Xenopus (Silurana) tropicalis]
gi|197246317|gb|AAI68488.1| Unknown (protein for MGC:172944) [Xenopus (Silurana) tropicalis]
Length = 1028
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 244/481 (50%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P +Y+W +NG+ L S + R I LTI +N D M
Sbjct: 331 EENILWECKASGRPKASYTWLKNGQRLQS-------KGRLQIDHGSLTITSVNIS-DSGM 382
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ T YSSA+LRV+ + P F K ++ T GG+V I C P+A+PKP W
Sbjct: 383 YQCLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLGKVGGSVLIECKPKASPKPSITW 442
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK + R I ++G L IS +++ D+G Y+CTA+N G S G L+V P+
Sbjct: 443 KKGKELQRESSRISILDDGTLKISNLTKADAGSYTCTASNHFGTASSTGTLVV-KDPTQV 501
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+++ W NG I D E G
Sbjct: 502 LVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLIDFQKDGEHFERVGGQDSAGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + AG+Y C+V ++V K+S +IV GPPG P + V E+ T+A + W G
Sbjct: 562 LMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPPDALTVEEITDTTAQLSWMPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI Y + ART ++ W VS + + VD GR + L PW YEF+VI
Sbjct: 622 VDNHSPIIMYSVQARTPFSVGWQAVS--TVPEVVD---GRSFTATVVGLSPWVEYEFRVI 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G GEPS PS + T P P+ + GGGG G+L I+WEP+P E QN Y
Sbjct: 677 AINEIGIGEPSPPSDKRRTEEALPEVTPANVSGGGGSKGELVITWEPVPEELQNGGGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + +T+ + V R S ++ YEVKV N+ G GP S + +
Sbjct: 737 VVAFRPFGTISWM-QTVVASADSSRYVYRNESLPPFSPYEVKVGVYNNRGEGPFSPLTVV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 120/295 (40%), Gaps = 34/295 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQD-RYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKT 74
++ Y+W N E P QD R F+ L I + P D Y C N +
Sbjct: 151 ELVYAWIFN------EYPPFVQQDNRRFVSQVTGNLYIAKVEPS-DAGNYTCVVTNTVTN 203
Query: 75 RYSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
LTL+ P + ES A +G V + C P P W++
Sbjct: 204 TRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVPSA-KGSTVKLECFALGNPVPTITWRR 262
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG I RR +G L I ++D+G Y C A N G + +G+L P++ +
Sbjct: 263 ADGKPISRKVRRH-RSSGVLEIPNFQQEDAGPYECVAENTRGKNMVRGQLTYFAPPTWVQ 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
++ IA N+ C A +Y W NG R+ + + ID G L
Sbjct: 322 KI-NDAHIAIEENILWECKASGRP--KASYTWLKNGQRLQSKG-------RLQIDHGSLT 371
Query: 245 ITNASFADAGEYECVVKSTVGKI--STKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
IT+ + +D+G Y+C+ ++ G I S + VI GP G V+ V + K ++
Sbjct: 372 ITSVNISDSGMYQCLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLGKVGGSV 426
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 110/288 (38%), Gaps = 30/288 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNPERDPAMYQ 65
L CE G P W NG L++ E QD RY + D L I + RD +Q
Sbjct: 45 LRLVCEVQGHPKPVVRWRVNGTLMD------EAQDYRYRVLDRSLIIASPDRNRDVGTFQ 98
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP---KFV 122
C A N L T S + SF+ R S EG + + C P A ++
Sbjct: 99 CEATNSLGTILSREAYVQFSYLDSFQTR-TRSTVSVREGQGMVLLCGPPAHSGELVYAWI 157
Query: 123 WKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVL 177
+ + + RR + + GNL I+ V D+G Y+C T TN + S +
Sbjct: 158 FNEYPPFVQQDNRRFVSQVTGNLYIAKVEPSDAGNYTCVVTNTVTNTRELGPSTPLTLRT 217
Query: 178 HG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
G P P + A ++L C A + + W + + +
Sbjct: 218 DGVMGEYEPKIEVHFPESVPSAKGSTVKLECFALGNPVPTIT--WRRADGKPISRKVRRH 275
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ G+LEI N DAG YECV ++T GK + + PP
Sbjct: 276 RS------SGVLEIPNFQQEDAGPYECVAENTRGKNMVRGQLTYFAPP 317
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 16/187 (8%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
V T +P PL+SE + + C + PKP W+ +G ++ R ++ +
Sbjct: 26 VFTQEPPNINFPLDSEDR-----TLRLVCEVQGHPKPVVRWRVNGTLMDEAQDYRYRVLD 80
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQ 199
++ SP D G + C ATN G S+ + + S+ + +++ + +
Sbjct: 81 RSLIIASPDRNRDVGTFQCEATNSLGTILSREAYVQFSYLDSFQTRTRSTVSVREGQGMV 140
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
L C AH+ EL+ Y W N N + G L I +DAG Y
Sbjct: 141 LLCGPPAHSGELV---YAWIFNEYPPFVQQDNRRFVSQVT---GNLYIAKVEPSDAGNYT 194
Query: 258 CVVKSTV 264
CVV +TV
Sbjct: 195 CVVTNTV 201
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 8/152 (5%)
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
V + RY R E+ L P+S YE KV N G G P SP + ++P +AP
Sbjct: 753 VASADSSRYVYRNES-----LPPFSPYEVKVGVYNNRGEG-PFSPLTVVYSAEEEPGRAP 806
Query: 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 450
+ + D+ +SW +P Y++ + K+N+ E + L+ GN
Sbjct: 807 AGVFSRSLTAWDIEVSWIAVPGSLSKGRIQGYEVRYWKQNEKEQNARKLRTLGNQ--TST 864
Query: 451 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
++ +T Y + V+A N G GP S V +
Sbjct: 865 KLSHLQGHTLYHLNVRAYNSAGTGPASTTVNV 896
>gi|432858868|ref|XP_004068978.1| PREDICTED: contactin-3-like [Oryzias latipes]
Length = 1026
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 242/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +L W C+A G P +YSW +NGE + +E R I++ L+I LN D M
Sbjct: 336 EENLFWECKASGKPKPSYSWLKNGEQVMAE-------GRVQIENGALSITALN-LSDSGM 387
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ T Y SAQL VL P F K PL++ A G VT+ C PEA+P +W
Sbjct: 388 YQCVAENKHGTIYYSAQLMVLASAPHFSKTPLKTVLKARLGSEVTLECKPEASPPAISLW 447
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R +F NG L I+ V++ D+ IY+C A N G + GRLI+ P+
Sbjct: 448 KKGNEILQRSERLSLFSNGTLQIANVTKWDAAIYTCVAKNQFGSASTSGRLIITE-PTRL 506
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + I ++ L C ++ LDV + W NG I D + E ++ G L
Sbjct: 507 TMRPTNMEIIVGESIVLPCQIASDPALDVTFSWAFNGQLIDFRRDGDHYERVGGSLSGDL 566
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N G+Y CV+ + V +ST ++V+ PPG P V V E+ ++A + WT G
Sbjct: 567 M-IRNIQLKHGGKYVCVIDTDVESLSTSAILVVKAPPGPPDKVTVEEITDSTAQLSWTPG 625
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
NG PIT Y + ART + W + + TG + L W YEF+V+
Sbjct: 626 RDNGSPITGYSVQARTPFTVGW-----QAMDTVPEAVTGNMLTATVVGLNAWVEYEFRVV 680
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS S + T P AP+ +GGGGG +L I+WEP+P E QN Y
Sbjct: 681 ARNAVGLGEPSPSSAKTRTEDTIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGDGFGY 740
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R + + G V V R + ++ +++KV A N+ G GP S + T+
Sbjct: 741 IIAFRPAGAVTWTRAVISTPG-VSRYVFRNDTIPPFSPFDIKVGAYNNRGEGPFSTITTV 799
Query: 483 W 483
+
Sbjct: 800 Y 800
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 124/282 (43%), Gaps = 35/282 (12%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+QA LT CEA G P Y W NG L++ P + R + L I L+ ++D
Sbjct: 46 DHQATLT--CEAEGSPQPQYRWSLNGTLID----PGHNYRRR-VSGGSLIISNLDKDQDS 98
Query: 62 AMYQCRAKN---QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-AP 117
+YQC A N + +R +S Q L +FK + + S EG V + C P +
Sbjct: 99 GVYQCTAFNTRGSILSRKASLQFAYLD---NFKTQMVRSAVNVREGQGVVLLCGPPPHSG 155
Query: 118 KPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKG 172
+ F W + + RR I E G+L I+ V D G Y+C N ++ S
Sbjct: 156 ELTFAWIFNQYPYFVQQDSRRFISQETGSLYIAKVEPSDVGNYTCVVNNTITREKALSSP 215
Query: 173 RLIVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+VL + PKI + A ++L C A + ++++ T +GV
Sbjct: 216 TPLVLRNDGVMGEYEPKIEVHFLDPVPAAKESMVKLECFALGNPVPEISWRRT-SGVPFP 274
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
++++ N N +LEI N D+G YEC+ ++ GK
Sbjct: 275 ----SKVKMKNSN---AVLEIPNFQQDDSGTYECIAENRRGK 309
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 107/274 (39%), Gaps = 30/274 (10%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
++T++W + N ++ R FI L I + P D Y C N +
Sbjct: 156 ELTFAW-----IFNQYPYFVQQDSRRFISQETGSLYIAKVEPS-DVGNYTCVVNNTITRE 209
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+ + L L+ P + L+ A E V + C P P+ W++
Sbjct: 210 KALSSPTPLVLRNDGVMGEYEPKIEVHFLDPVPAAKES-MVKLECFALGNPVPEISWRRT 268
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ + N L I +DDSG Y C A N G + ++GR I H ++ Q
Sbjct: 269 SGVPFPSKVKMKNSNAVLEIPNFQQDDSGTYECIAENRRGKNVARGR-ISFHAKPHWIQT 327
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ NL C A + +Y W NG ++ + + I+ G L IT
Sbjct: 328 MTDSALSIEENLFWECKASGKP--KPSYSWLKNGEQV-------MAEGRVQIENGALSIT 378
Query: 247 NASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +D+G Y+CV ++ G I S + V+ P
Sbjct: 379 ALNLSDSGMYQCVAENKHGTIYYSAQLMVLASAP 412
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 122/514 (23%), Positives = 189/514 (36%), Gaps = 90/514 (17%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLN-SETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+++T C+ P W + E+L SE L L + L I + + D A+
Sbjct: 429 SEVTLECKPEASPPAISLWKKGNEILQRSERLSL-------FSNGTLQIANVT-KWDAAI 480
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKF 121
Y C AKNQ + +S +L ++T RP E GE ++ + C + P F
Sbjct: 481 YTCVAKNQFGSASTSGRL-IITEPTRLTMRPTNMEIIVGE--SIVLPCQIASDPALDVTF 537
Query: 122 VWKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRL 174
W +G +I +E +G+L+I + G Y C T+V + S +
Sbjct: 538 SWAFNGQLIDFRRDGDHYERVGGSLSGDLMIRNIQLKHGGKYVCVIDTDVESLSTSA--I 595
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VAYIWT---HNGVRIGNMDLN 229
+V+ P P K+T+ EE+ D WT NG I +
Sbjct: 596 LVVKAP---PGPPDKVTV--------------EEITDSTAQLSWTPGRDNGSPITGYSVQ 638
Query: 230 E----------LETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KIS 268
++T + G +L T EYE V ++ VG K
Sbjct: 639 ARTPFTVGWQAMDTVPEAVTGNMLTATVVGLNAWVEYEFRVVARNAVGLGEPSPSSAKTR 698
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWF 325
T+ T+ P + GG K+ I W + NG Y I R TW
Sbjct: 699 TEDTIPDTAPTDVGGGGGT----KSELVITWEPVPEELQNGDGF-GYIIAFRPAGAVTWT 753
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
G V RY R + + P+S ++ KV A N G G S+ + Y+ D
Sbjct: 754 RAVISTPG--VSRYVFRND-----TIPPFSPFDIKVGAYNNRGEGPFSTITTVYSA-EDV 805
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--KNDTEFQSETLKEYG 443
P P R+ + + WE + + Y ++W K DT + Y
Sbjct: 806 PSVPPKRVWARSLSAAQIEVMWEAVSDMPERVLG-YEVVYWEDDTKPDTIGKVRITGNYT 864
Query: 444 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
V I ++ + FY + V A N GPGP+S
Sbjct: 865 LVNITGLKANTAFY-----LSVAAFNTAGPGPQS 893
>gi|317418928|emb|CBN80966.1| Contactin-3 [Dicentrarchus labrax]
Length = 1026
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 168/481 (34%), Positives = 240/481 (49%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +L W C+A G P +YSW +NG+ + +E R I++ L+I LN D M
Sbjct: 336 EENLFWECKATGKPKPSYSWLKNGDQVVAE-------GRVQIENGALSIAALN-LSDSGM 387
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ YSSAQL VL PSF K PL + A G VT+ C P+A+P +W
Sbjct: 388 YQCVAENKHGIIYSSAQLMVLASPPSFSKSPLRALLKARSGSEVTLECKPQASPPAISLW 447
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R + NG L I+ V+R D+ Y+C A N G + GRLI+ P+
Sbjct: 448 KKGNEILQRTERITLLPNGTLKITNVTRRDAASYTCVAKNQFGTASTTGRLIITE-PTRI 506
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + I ++ L C + LDV++ W NG I D + E +I G L
Sbjct: 507 TMRPTNMEIIVGESIVLPCQIACDPALDVSFSWAFNGQLIDFQRDSDHFERVGGSISGDL 566
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N G+Y CV+ + V +ST ++V+GPPG P V V E+ ++A + WT G
Sbjct: 567 M-IRNIQLNHGGKYVCVIDTDVESLSTSAILVVKGPPGPPDKVAVEEITDSTAQLSWTPG 625
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
NG PIT Y I ART + W + + G + L W YEF+V+
Sbjct: 626 RDNGSPITGYIIQARTPFTVGW-----QAVDTVPEVVNGNMLTATVVGLNAWVEYEFRVV 680
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS S + T P AP+ +GGGGG +L I+WEP+P E QN Y
Sbjct: 681 ARNTVGLGEPSPASTKTRTEDAIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGFGY 740
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R + + G V V R + ++ ++VKV A N+ G GP S + T+
Sbjct: 741 IIAFRPVGTVTWTRAVISTPG-VARYVFRNDTIPPFSPFDVKVGAYNNRGEGPFSSIATV 799
Query: 483 W 483
+
Sbjct: 800 Y 800
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 33/291 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+ T TCEA G + Y W NG L++ L + R + L I L+ ++D +YQ
Sbjct: 48 EATITCEAEGSSPLQYRWSLNGTLID-----LGNDYRRHMSGGSLIISNLDKDQDTGVYQ 102
Query: 66 CRAKN---QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
C A N + +R +S Q L +FK + + S EG V + C P A + + F
Sbjct: 103 CTAFNTWGAILSRRASLQFAYLD---NFKSQTVRSAVNVREGQGVVLLCGPPAHSGELTF 159
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKGRLIV 176
W + + RR I E G+L I+ V D G Y+C N ++ S +V
Sbjct: 160 AWIFNEYPYFVQQDSRRFISQETGSLYIAKVESSDVGNYTCVVNNTVTREKVLSSPTPLV 219
Query: 177 LHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + PKI + A ++L C A + ++++ T G
Sbjct: 220 LRSDGVMGEYEPKIEVHFPDSVPAAKESVVKLECFALGNPVPEISWRRTS-----GIPFP 274
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++++ N N +LEI N DAG YEC+ ++ GK + + + P
Sbjct: 275 SKVKMKNSN---AVLEIPNLQQEDAGTYECMAENRRGKNAARGRISFHAKP 322
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 189/509 (37%), Gaps = 80/509 (15%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++T C+ P W + E+L + + + L I + RD A Y
Sbjct: 429 SEVTLECKPQASPPAISLWKKGNEILQ------RTERITLLPNGTLKITNVT-RRDAASY 481
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV--TIFCNPEAAPKPKFV 122
C AKNQ T ++ +L ++T RP E GE + I C+P A F
Sbjct: 482 TCVAKNQFGTASTTGRL-IITEPTRITMRPTNMEIIVGESIVLPCQIACDP--ALDVSFS 538
Query: 123 WKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLI 175
W +G +I FE +G+L+I + + G Y C T+V + S ++
Sbjct: 539 WAFNGQLIDFQRDSDHFERVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSTSA--IL 596
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VAYIWT---HNGVRIG------ 224
V+ GP P K+ + EE+ D WT NG I
Sbjct: 597 VVKGP---PGPPDKVAV--------------EEITDSTAQLSWTPGRDNGSPITGYIIQA 639
Query: 225 ----NMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-----KISTKTTV 273
+ ++T ++G +L T EYE V ++TVG STKT
Sbjct: 640 RTPFTVGWQAVDTVPEVVNGNMLTATVVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRT 699
Query: 274 IVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEH 330
P P V K+ I W + NG Y I R TW
Sbjct: 700 EDAIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGF-GYIIAFRPVGTVTWTRAVIS 758
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
G V RY R + + P+S ++ KV A N G G SS + Y+ + P AP
Sbjct: 759 TPG--VARYVFRNDT-----IPPFSPFDVKVGAYNNRGEGPFSSIATVYSA-EEVPSVAP 810
Query: 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIA 448
R+ + + WE LP + Y ++W K DT + Y V I
Sbjct: 811 KRVRTRSVSAVQIEVIWEALPAIPERVLG-YEAVYWEDDTKPDTVGKVRISGNYTLVNIT 869
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPES 477
++ + +Y + V A N GPGP+S
Sbjct: 870 GLKANTVYY-----LSVAAFNTAGPGPQS 893
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 166
V + C P P+ W++ I + N L I + ++D+G Y C A N G
Sbjct: 249 VKLECFALGNPVPEISWRRTSGIPFPSKVKMKNSNAVLEIPNLQQEDAGTYECMAENRRG 308
Query: 167 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+ ++GR I H ++ Q ++ NL C A + +Y W NG ++
Sbjct: 309 KNAARGR-ISFHAKPHWLQTMTDTALSIEENLFWECKATGKP--KPSYSWLKNGDQV--- 362
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGL 281
+ + I+ G L I + +D+G Y+CV ++ G I S+ +++ PP
Sbjct: 363 ----VAEGRVQIENGALSIAALNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPSF 414
>gi|327266140|ref|XP_003217864.1| PREDICTED: contactin-4-like [Anolis carolinensis]
Length = 1020
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 247/481 (51%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P +YSW ++GELL LP Q+R I+ LTI ++ D M
Sbjct: 323 EENIYWECKANGRPKPSYSWLKDGELL----LP---QERIQIEHGTLTITNVSLS-DTGM 374
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ Y SA+L V+ + P F K L+ T GG+ TI C P+A+P+P F W
Sbjct: 375 YQCVAENRYGAIYISAELSVIAVGPDFSKNYLKRLTLVKVGGDATIECKPKASPRPTFTW 434
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R I E+G L I V++ D+G Y+C ATN G+ S G L V+ P+ +
Sbjct: 435 KKGKEILRENERYTIMEDGTLKIINVTKADAGSYTCIATNHFGVASSTGNL-VIKDPTRF 493
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + A ++ L C + LD+ + W+ NG I D + E G
Sbjct: 494 MVAPTSMDVTAGESILLPCQVSHDHPLDIMFTWSFNGHLIDFERDGDHFERVGGQDSAGD 553
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 554 LMIRSIQLNHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQVSWRPG 613
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y + ART ++ W V + + + +D G + L PW YEF+V+
Sbjct: 614 PDNRSPITTYVVQARTPFSVGWQAV--NTVPEVID---GNTFTATVVGLNPWVEYEFRVV 668
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A + +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 669 AASLIGIGEPSKPSEKRRTEEALPEVTPANVSGGGGTKSELVITWETVPEELQNGGGFGY 728
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + +T+ + V R S ++ YEVKV N+ G GP S V +
Sbjct: 729 VVAFRPVGTISWM-QTVVASPDASKYVFRNESLPPFSPYEVKVGVYNNRGEGPFSHVTVV 787
Query: 483 W 483
+
Sbjct: 788 Y 788
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 158
+ +G V + C P P W++ DG I RR ++ ++L P ++D+G+Y
Sbjct: 230 SAKGTTVRLECFALGNPVPAISWRRADGKQIPKKARRH--KSSSILEIPNFQQEDAGLYE 287
Query: 159 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
C A NV G + ++G+L + P + Q +A N+ C A+ +Y W
Sbjct: 288 CVAENVRGRNVARGQL-TFYAPPNWTQRINDAHVAIEENIYWECKANGRP--KPSYSWLK 344
Query: 219 NGVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI 274
+G EL P I I+ G L ITN S +D G Y+CV ++ G IS + +VI
Sbjct: 345 DG---------ELLLPQERIQIEHGTLTITNVSLSDTGMYQCVAENRYGAIYISAELSVI 395
Query: 275 VEGP 278
GP
Sbjct: 396 AVGP 399
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 180/500 (36%), Gaps = 49/500 (9%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAM 63
D T C+ P T++W + E+L + +RY I ++ T++ +N + D
Sbjct: 416 GDATIECKPKASPRPTFTWKKGKEIL-------RENERYTIMEDG-TLKIINVTKADAGS 467
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y C A N S+ L V+ F P + AGE + + + F W
Sbjct: 468 YTCIATNHFGVASSTGNL-VIKDPTRFMVAPTSMDVTAGESILLPCQVSHDHPLDIMFTW 526
Query: 124 KKDGNIIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+G++I FE G+L+I + + +G Y C + LIV
Sbjct: 527 SFNGHLIDFERDGDHFERVGGQDSAGDLMIRSIQLNHAGKYVCMVQTSVDKLSAAADLIV 586
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + R + + +G +N + P +
Sbjct: 587 RGPPGPPEAVTIDEITDTTAQVSWRPGPDNRSPITTYVVQARTPFSVGWQAVNTV--PEV 644
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVE 289
IDG T EYE V S +G K S K P P V
Sbjct: 645 -IDGNTFTATVVGLNPWVEYEFRVVAASLIGIGEPSKPSEKRRTEEALPEVTPANVSGGG 703
Query: 290 VHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
K+ I W +G G + ++ + +W T V + +Y R
Sbjct: 704 GTKSELVITWETVPEELQNGGGFGY-VVAFRPVGTISWMQT------VVASPDASKYVFR 756
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E+ L P+S YE KV N G G S + Y+ ++P +AP+ I +
Sbjct: 757 NES-----LPPFSPYEVKVGVYNNRGEGPFSHVTVVYSA-DEEPNKAPTSIFARSMSASE 810
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ + W LP + Y++ + + D E Q+ +K N A RI + Y
Sbjct: 811 VEVFWSMLPETQSKGRIQGYEVRYWQHGDKEEQAGRMKTMTNQTFA--RISNLKGNALYH 868
Query: 463 VKVQAINDVGPGPESEVVTI 482
+ V+A N G GP S VV +
Sbjct: 869 LAVKAYNTAGMGPSSAVVNV 888
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 125/325 (38%), Gaps = 32/325 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + +CE G P T W NG +++ + RY + + L I N +D
Sbjct: 33 DEKKVKLSCEVKGNPKPTIRWKLNGTIVD-----IGMDYRYSVVEGSLLINNPNKTQDAG 87
Query: 63 MYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-- 119
YQC A N T S A+L+ L+ FK R S +G + + C P
Sbjct: 88 TYQCIATNSFGTIVSREAKLQFAYLE-KFKTR-TRSTVSVRQGQGMVLLCGPPPHSGELI 145
Query: 120 -KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+++ + + + RR + E GNL I+ V + D G Y+C TN + G L
Sbjct: 146 YAWIFNEYPSFVHQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNSVTNNRVLGPTTPL 205
Query: 178 ----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ P Q P + A ++L C A + +++ +G +I
Sbjct: 206 ILRNDGVMGEYEPKIEVQFPEMVPSAKGTTVRLECFALGNPVPAISW-RRADGKQIPKKA 264
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
+ +LEI N DAG YECV ++ G+ + + PP +
Sbjct: 265 RRHKSS-------SILEIPNFQQEDAGLYECVAENVRGRNVARGQLTFYAPPNWTQRIND 317
Query: 288 VEVHKTSATIQWTDGATNGRPITHY 312
V I W + NGRP Y
Sbjct: 318 AHV-AIEENIYW-ECKANGRPKPSY 340
>gi|334335513|ref|XP_003341782.1| PREDICTED: contactin-4 [Monodelphis domestica]
Length = 1027
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 241/482 (50%), Gaps = 18/482 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ + W C+A G P TY W +NGE PL QDR I+ L I +N D M
Sbjct: 330 EESIFWECKANGRPKPTYRWLKNGE-------PLLTQDRIQIEHGTLNITTVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ ++SA+L V+ L P F + L+ T GG V I C P+A+P+P + W
Sbjct: 382 YQCVAENRHGIIFASAELSVIALGPDFSRTLLKRMTLVKVGGEVVIECKPKASPRPAYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R E+G+L I V++ D+G Y+C ATN G S G LIV
Sbjct: 442 KKGKEIVRENERITFSEDGSLRIMNVTKSDAGSYTCIATNHFGTASSTGNLIVKDATRLL 501
Query: 184 EQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGG 241
+PP + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 502 --VPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAG 559
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I + AG+Y C+V+++V KIS +IV GPPG P V + E+ T+A + W
Sbjct: 560 DLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGPPEAVTIDEITDTTAQLSWRP 619
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
GA N PIT Y I ART ++ W V + + + +D GR + L PW YEF+V
Sbjct: 620 GADNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GRTFTATVVGLNPWVEYEFRV 674
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN
Sbjct: 675 VAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFG 734
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
Y + +R + +T+ + V R S ++ YEVKV N+ G G S V
Sbjct: 735 YVVAFRPFGKVSWM-QTVLASADASKYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTV 793
Query: 482 IW 483
++
Sbjct: 794 VY 795
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKQIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A ++ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWNQKI-NDIHVAIEESIFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTQD-------RIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSVIALGP 406
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 125/317 (39%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPLIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATN 104
Query: 71 QLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L+ +FK R S +G + + C P + + + W +
Sbjct: 105 SFGTIVSKEAKLQFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G +I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKQIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V +
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWNQKINDIHV-AIEES 332
Query: 297 IQWTDGATNGRPITHYK 313
I W + NGRP Y+
Sbjct: 333 IFW-ECKANGRPKPTYR 348
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIREPSHVMFPLDSEE-----KKVKLNCEVKGNPKPLIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G SK +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSKEAKLQFAYLENFKTRTRSTVSVRQGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 171/494 (34%), Gaps = 49/494 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P Y+W + E++ E++ F +D L I + + D Y C A N
Sbjct: 429 CKPKASPRPAYTWKKGKEIVR------ENERITFSEDGSLRIMNVT-KSDAGSYTCIATN 481
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
T S+ L ++ P + GE + + + + F W +G++I
Sbjct: 482 HFGTASSTGNL-IVKDATRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLI 540
Query: 131 GSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
FE G+L+I + +G Y C + LIV P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGPP 600
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R A + + I +G +N + P + IDG
Sbjct: 601 EAVTIDEITDTTAQLSWRPGADNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGRTF 657
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V +T+G + S K P P V K+
Sbjct: 658 TATVVGLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 717
Query: 297 IQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
I W +G G + ++ + +W T + +Y R E+
Sbjct: 718 ITWETVPEELQNGGGFGY-VVAFRPFGKVSWMQTVL------ASADASKYVFRNES---- 766
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+S YE KV N G G SP + ++P + P I D+ + W
Sbjct: 767 -LPPFSPYEVKVGVYNNKGEGS-FSPVTVVYSAEEEPTKPPPSIFARSLSATDIEVFWSS 824
Query: 410 LPREKQNAPNIY-YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
P E + I Y++ + +D E + ++ GN +I + Y + V+A
Sbjct: 825 -PLETLSKGRIQGYEVKYWSHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAY 881
Query: 469 NDVGPGPESEVVTI 482
N G GP S V +
Sbjct: 882 NTAGTGPYSVTVNV 895
>gi|345786234|ref|XP_003432800.1| PREDICTED: contactin-4 isoform 2 [Canis lupus familiaris]
Length = 807
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 242/481 (50%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ +L I +N D M
Sbjct: 111 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGMLNITIVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 163 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRDILRENERITISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V K+S +IV GPPG P GV + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEGVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G+L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGMLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 187
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 172/490 (35%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L + +R I ++ ++R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRDIL-------RENERITISEDG-SLRIVNVTKSDAGSYTCIAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 381 PEGVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PM 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAG 665
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 666 TGPSSATVNV 675
>gi|345786232|ref|XP_003432799.1| PREDICTED: contactin-4 isoform 1 [Canis lupus familiaris]
Length = 1026
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 242/481 (50%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ +L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGMLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILRENERITISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V K+S +IV GPPG P GV + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEGVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G+L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGMLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 406
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 124/317 (39%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ RY + + L I N +D MYQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVDTGV-----DFRYSVVEGSLLINNPNKTQDAGMYQCIATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+LR L+ +FK R S +G + + C P A + + + W +
Sbjct: 105 SFGTIVSREAKLRFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVHFPETVPTAKGTTVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AIEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 333 VFW-ECKANGRPKPTYR 348
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFE 140
V +PS PL SE V + C + PKP WK +G + +G R + E
Sbjct: 27 VFIQEPSHVMFPLNSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDTGVDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G+Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLRFAYLENFKTRTRSTVSVRQGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 172/490 (35%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L + +R I ++ ++R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIL-------RENERITISEDG-SLRIVNVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 600 PEGVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PM 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPSSATVNV 894
>gi|397522453|ref|XP_003831281.1| PREDICTED: contactin-4 [Pan paniscus]
Length = 1026
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVDTGM-----DFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 333 VFW-ECKANGRPKPTYR 348
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + +G R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + +++ ++ +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIV-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPSSATVNV 894
>gi|426339224|ref|XP_004033558.1| PREDICTED: contactin-4-like [Gorilla gorilla gorilla]
Length = 807
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 239/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL QDR I+ L I +N D M
Sbjct: 111 EENVFWECKANGRPKPTYRWLKNGE-------PLLTQDRIQIEQGTLNITIVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 163 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRGILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTQD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 170/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + +L ++ +R I ++ +R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRGIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 381 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSISATDIEVFWAS-PL 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 665
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 666 TGPSSATVNV 675
>gi|28373122|ref|NP_783200.1| contactin-4 isoform a precursor [Homo sapiens]
gi|332688245|ref|NP_001193884.1| contactin-4 isoform a precursor [Homo sapiens]
gi|55976529|sp|Q8IWV2.1|CNTN4_HUMAN RecName: Full=Contactin-4; AltName: Full=Brain-derived
immunoglobulin superfamily protein 2; Short=BIG-2;
Flags: Precursor
gi|26891535|gb|AAM00025.1| contactin 4 [Homo sapiens]
gi|29837411|gb|AAP05786.1| BIG-2 [Homo sapiens]
gi|119584279|gb|EAW63875.1| contactin 4, isoform CRA_c [Homo sapiens]
gi|119584282|gb|EAW63878.1| contactin 4, isoform CRA_c [Homo sapiens]
Length = 1026
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVDTGM-----DFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP YK
Sbjct: 333 VFW-ECKANGRPKPTYK 348
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + +G R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPSSATVNV 894
>gi|317418925|emb|CBN80963.1| Contactin-4 [Dicentrarchus labrax]
Length = 1031
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 237/483 (49%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
M A+L W C+A G P TY W +NG+ PL + R ++ LTI ++ D
Sbjct: 334 MAIDANLQWECKAIGKPRATYKWLKNGQ-------PLTAEGRIHVEAGRLTISRIS-LLD 385
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A N+ Y+SA+L+V+ P F +RP++ T GG V + C P A+P+
Sbjct: 386 SGMYQCVADNEQGAVYASAELKVVASPPDFTRRPVKKSTVIQRGGEVVLECRPHASPRAT 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W + G ++ R+ I E+G L I+ +S+ D G Y+C A N G S G L+V P
Sbjct: 446 ISWWRGGELLKDSKRQTIMEDGTLRITNISKSDGGRYTCVARNHFGTSSSTGTLVVKE-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P + ++L L C ++ L + W NG I E G
Sbjct: 505 TRIIVPPLSLDATVGQSLVLPCEVSSDSSLSPIFKWFFNGKAIDFSRQEHFEMIGGGFAG 564
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L+ + N +G+Y C+V + V +S +IV GPPG P G+ V ++ T+ + W
Sbjct: 565 DLM-VRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPPGAPEGLVVTDITDTTVQLSWG 623
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N P+T Y + ART ++ W + D G+ + L PW YEF+
Sbjct: 624 SGPDNHSPVTMYMVQARTPFSIGW-----QTVRTVPDSVPGQMMHATVKDLNPWVDYEFR 678
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N +G GEPS+PS Q T A P AP + GGGG G+L I WEP+P E+Q+ +
Sbjct: 679 VVAINSVGVGEPSTPSKQIRTKAAVPKVAPVSVSGGGGARGELVIMWEPVPEEQQSGEDF 738
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R + + +T+ + + R S +++EVKV N VG G S VV
Sbjct: 739 GYVVAFRPLGSSTW-IQTVLASPDASRYIYRNDSIAPLSQFEVKVGVYNSVGEGRFSRVV 797
Query: 481 TIW 483
T++
Sbjct: 798 TVF 800
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 188/493 (38%), Gaps = 49/493 (9%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++ C P T SW+R GELL + + + ++D L I ++ + D Y
Sbjct: 430 GEVVLECRPHASPRATISWWRGGELLK------DSKRQTIMEDGTLRITNIS-KSDGGRY 482
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A+N T S+ L V+ PL + G+ + + +++ P F W
Sbjct: 483 TCVARNHFGTSSSTGTL-VVKEPTRIIVPPLSLDATVGQSLVLPCEVSSDSSLSPIFKWF 541
Query: 125 KDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+G I R++ FE G+L++ + SG Y C + LIV
Sbjct: 542 FNGKAI-DFSRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRG 600
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P E L +T +QL + + V ++ + T ++
Sbjct: 601 PPGAPEGL--VVTDITDTTVQLSWGSGPDNHSPVTMYMVQARTPF-SIGWQTVRTVPDSV 657
Query: 239 DGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQV 287
G ++ T +YE V ++VG +I TK V P + GG
Sbjct: 658 PGQMMHATVKDLNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPVSVSGGGGA 717
Query: 288 VEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
+ I W + +G Y + R +STW + + + RY R +
Sbjct: 718 ----RGELVIMWEPVPEEQQSGEDF-GYVVAFRPLGSSTW--IQTVLASPDASRYIYRND 770
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ + P S +E KV N +G G S ++ ++P +APSR+ ++
Sbjct: 771 S-----IAPLSQFEVKVGVYNSVGEGRFSRVVTVFSA-DEEPSEAPSRVWARAVSASEIE 824
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
+ WEP+P I Y++ + +K + ++E ++ N + + T Y +
Sbjct: 825 VYWEPIPPGSSTEKIIAYEVLFWEKGSRQSEAERVRIINNTAL----LSGLKGSTVYLIS 880
Query: 465 VQAINDVGPGPES 477
V+A N G GP S
Sbjct: 881 VRAQNSAGLGPCS 893
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 126/318 (39%), Gaps = 30/318 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P Y W +G +N+E+ P Y + + L I + +YQC A N
Sbjct: 53 CKAKGNPPPHYRWKVDGREINTESDP-----NYNLVEGNLLINNPHVINHGGVYQCIATN 107
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG-- 127
T S +F ++P + + EG V + C P + K+ W +G
Sbjct: 108 TFGTVVSREAKVQFAFLQNFSRKPRNTVSVR-EGQAVVLLCGPPPHYGEIKYSWVFNGQR 166
Query: 128 NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG--------RLIVL- 177
+ + RR I + GNL I+ V D G Y+C N+ R +V+
Sbjct: 167 SFLRQDARRFISQRTGNLYIAKVEASDVGNYTCVVRNMMTNATVFSSPTPVVVRRDVVMG 226
Query: 178 -HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P Q P + ++ +++L C A + +++ G + +N
Sbjct: 227 EYEPKIEVQFPDTLHVSKGSSVKLECFALGNPVPSISWRRADGNPLPGKIKINH------ 280
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT-SA 295
G+LEI DAG YEC+ +++ G+ + ++ L + + H A
Sbjct: 281 --SSGVLEIPYFRPEDAGVYECIAENSRGRNVARGQLLFHNVEQLHWVQTLKDAHMAIDA 338
Query: 296 TIQWTDGATNGRPITHYK 313
+QW A G+P YK
Sbjct: 339 NLQWECKAI-GKPRATYK 355
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FEN 141
V T +PS PL ++ V I C + P P + WK DG I +
Sbjct: 30 VFTQEPSDSIFPLSTDDK-----QVFINCKAKGNPPPHYRWKVDGREINTESDPNYNLVE 84
Query: 142 GNLLI-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQ 199
GNLLI +P + G+Y C ATN G S+ + + + P +++ + +
Sbjct: 85 GNLLINNPHVINHGGVYQCIATNTFGTVVSREAKVQFAFLQNFSRKPRNTVSVREGQAVV 144
Query: 200 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
L C ++ Y W NG R L + I+ G L I +D G Y CV
Sbjct: 145 LLCGP-PPHYGEIKYSWVFNGQR---SFLRQDARRFISQRTGNLYIAKVEASDVGNYTCV 200
Query: 260 VKSTVGK---ISTKTTVIV 275
V++ + S+ T V+V
Sbjct: 201 VRNMMTNATVFSSPTPVVV 219
>gi|28373126|ref|NP_783302.1| contactin-4 isoform c [Homo sapiens]
gi|119584278|gb|EAW63874.1| contactin 4, isoform CRA_b [Homo sapiens]
gi|189067310|dbj|BAG37020.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 2 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 53
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 54 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 113
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 232
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 233 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 292
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 293 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 347
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 348 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 407
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 408 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 466
Query: 483 W 483
+
Sbjct: 467 Y 467
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 101 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 152
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 153 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 211
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 212 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 271
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 272 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 328
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 329 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 388
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 389 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 440
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 441 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 498
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 499 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 556
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 557 TGPSSATVNV 566
>gi|395516508|ref|XP_003762429.1| PREDICTED: contactin-4 [Sarcophilus harrisii]
Length = 1094
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 241/481 (50%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ + W C+A G P TY W +NGE L + QDR I+ L I +N D M
Sbjct: 397 EESIFWECKANGRPKPTYRWLKNGESLLT-------QDRIQIEHGTLNITTVNLS-DAGM 448
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ ++SA+L V+ L P F + L+ T GG V I C P+A+P+P + W
Sbjct: 449 YQCVAENRHGIIFASAELSVIALGPDFSRTLLKRMTLVKVGGEVVIECKPKASPRPVYTW 508
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 509 KKGKEIVRENERITFSEDGSLRIMNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRL 567
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 568 LVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGRLIDFDKDGDHFERVGGQDSAGD 627
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + AG+Y C+V+++V KIS +IV GPPG P V + E+ T+A + W G
Sbjct: 628 LMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 687
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
A N P+T Y I ART ++ W V + + + +D GR + L PW YEF+V+
Sbjct: 688 ADNHSPVTMYVIQARTPFSVGWQAV--NTVPELID---GRTFTATVVSLNPWVEYEFRVV 742
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 743 AANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGY 802
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + +T+ + V R S ++ YEVKV N+ G G S V +
Sbjct: 803 VVAFRPFGKVSWM-QTVLASADASRYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVV 861
Query: 483 W 483
+
Sbjct: 862 Y 862
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 305 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 363
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A ++ C A+ Y W NG
Sbjct: 364 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEESIFWECKANGRP--KPTYRWLKNG 420
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 421 ESLLTQD-------RIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSVIALGP 473
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 124/317 (39%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 117 CEVKGNPKPLIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATN 171
Query: 71 QLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L+ +FK R S +G + + C P + + + W +
Sbjct: 172 SFGTIVSKEAKLQFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPPHSGELSYAWIFNEY 229
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 230 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 289
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 290 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIA-------RKARR 340
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V +
Sbjct: 341 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AIEES 399
Query: 297 IQWTDGATNGRPITHYK 313
I W + NGRP Y+
Sbjct: 400 IFW-ECKANGRPKPTYR 415
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 94 IFIHEPSHVMFPLDSEE-----KKVKLNCEVKGNPKPLIRWKLNGTDVDIGMDFRYSVVE 148
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G SK +L + ++ + +++ + +
Sbjct: 149 GSLLINNPNKTQDAGTYQCIATNSFGTIVSKEAKLQFAYLENFKTRTRSTVSVRQGQGMV 208
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 209 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 253
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 254 SDVGNYTCVVTNTV------TNHKVLGPP 276
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 172/494 (34%), Gaps = 49/494 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P Y+W + E++ E++ F +D L I + + D Y C A N
Sbjct: 496 CKPKASPRPVYTWKKGKEIVR------ENERITFSEDGSLRIMNVT-KSDAGSYTCIATN 548
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
T S+ L V+ P + GE + + + + F W +G +I
Sbjct: 549 HFGTASSTGNL-VVKDPTRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGRLI 607
Query: 131 GSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
FE G+L+I + +G Y C + LIV P
Sbjct: 608 DFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGPP 667
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R A + + I +G +N + P + IDG
Sbjct: 668 EAVTIDEITDTTAQLSWRPGADNHSPVTMYVIQARTPFSVGWQAVNTV--PEL-IDGRTF 724
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T S EYE V +T+G + S K P P V K+
Sbjct: 725 TATVVSLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 784
Query: 297 IQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
I W +G G + ++ + +W T + + RY R E+
Sbjct: 785 ITWETVPEELQNGGGFGY-VVAFRPFGKVSWMQTV------LASADASRYVFRNES---- 833
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+S YE KV N G G SP + ++P + P I D+ + W
Sbjct: 834 -LPPFSPYEVKVGVYNNKGEGS-FSPVTVVYSAEEEPTKPPPSIFARSLSATDIEVFWSS 891
Query: 410 LPREKQNAPNIY-YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
P E + I Y++ + +D E + ++ GN +I + Y + V+A
Sbjct: 892 -PLESLSKGRIQGYEVKYWSHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAY 948
Query: 469 NDVGPGPESEVVTI 482
N G GP S V +
Sbjct: 949 NTAGTGPYSVTVNV 962
>gi|119584281|gb|EAW63877.1| contactin 4, isoform CRA_e [Homo sapiens]
Length = 807
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 111 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 163 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 381 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 665
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 666 TGPSSATVNV 675
>gi|193783587|dbj|BAG53498.1| unnamed protein product [Homo sapiens]
Length = 807
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 239/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 111 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L T GG V I C P+A+PKP + W
Sbjct: 163 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLRRVTLVKVGGEVVIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 381 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLRGSVLYHLAVKAYNSAG 665
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 666 TGPSSATVNV 675
>gi|348513041|ref|XP_003444051.1| PREDICTED: contactin-1a-like [Oreochromis niloticus]
Length = 1095
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 248/493 (50%), Gaps = 44/493 (8%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++D T +C+A G P W +NGE + DR ++ + LT D
Sbjct: 420 DLRSDYTMSCKASGKPKPHIRWLKNGEPV----------DRNEMRFSSLTFD------DS 463
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ Y++A+LRV P+F++ P++ A + G V I C P+AAPKP F
Sbjct: 464 GMYQCIAENRHGVIYANAELRVFACAPTFERNPVK-RVLAAKNGRVVIECRPKAAPKPAF 522
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W KD ++ + R I+E+G+L I V+R D G Y+C A N G S G L+V+ +
Sbjct: 523 SWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGDLLVMDS-T 581
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + N ++C+A ++ LD+ +IW+ +G I + D E
Sbjct: 582 KITLAPSNTDVKVGENTSMQCAASHDQSLDITFIWSLDGRVIDLHKDSQHYERTTNGSSN 641
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG+Y C ++ V I+ ++V GPPG PGGV+++E S +QW+
Sbjct: 642 GELLIKNVQLKHAGQYTCTAQTPVDNITASAHLVVRGPPGAPGGVRIIEKTDKSVKLQWS 701
Query: 301 DGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
GA N PI+ Y I + + N W N + + E G E + L+PW+ YEF
Sbjct: 702 RGADNHSPISKYTIQYKDQFSNDVWKNATTFPVNVE-----GNAEMTTVVDLIPWTDYEF 756
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+VIA N LG G+PS+PSP T P APS +GGGGG +L+I+W P+ + PN
Sbjct: 757 RVIATNTLGTGDPSNPSPIIKTLEAVPVVAPSDVGGGGGASRELTITWTPVKPKYYYGPN 816
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---------YTEYEVKVQAIND 470
Y + ++ +++ E++ +AV + Y TE++VKV+A N
Sbjct: 817 FGYIVAFKPQDEQEWKR----------VAVADPQARRYVHKASDIPPLTEFQVKVKAFNV 866
Query: 471 VGPGPESEVVTIW 483
G GP S I+
Sbjct: 867 QGEGPYSLTAIIY 879
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 189/498 (37%), Gaps = 70/498 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPER-DPAMYQCRA 68
C P +SW ++ ELL++ T R FI +D L I LN R D Y C A
Sbjct: 512 CRPKAAPKPAFSWSKDTELLSNST-------RVFIWEDGSLEI--LNVTRADEGRYTCFA 562
Query: 69 KNQLKTRYSSAQLRVL-----TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N S+ L V+ TL PS ++ GE ++ + + + F+W
Sbjct: 563 ENDRGKANSTGDLLVMDSTKITLAPS------NTDVKVGENTSMQCAASHDQSLDITFIW 616
Query: 124 KKDGNIIGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
DG +I + +E NG LLI V +G Y+CTA + L+V
Sbjct: 617 SLDGRVIDLHKDSQHYERTTNGSSNGELLIKNVQLKHAGQYTCTAQTPVDNITASAHLVV 676
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P + +I ++++L+ S + ++ + N T +
Sbjct: 677 RGPPGAPGGV--RIIEKTDKSVKLQWSRGADNHSPISKYTIQYKDQFSNDVWKNATTFPV 734
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVGK---------ISTKTTVIVEGPPGLPGGV 285
N++G T +YE + +T+G I T V V P + GG
Sbjct: 735 NVEGNAEMTTVVDLIPWTDYEFRVIATNTLGTGDPSNPSPIIKTLEAVPVVAPSDVGGGG 794
Query: 286 QVVEVHKTSATIQWTDGATNGR--PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
TI WT P Y + + W V+ V + RY +
Sbjct: 795 GA----SRELTITWTPVKPKYYYGPNFGYIVAFKPQDEQEWKRVA--VADPQARRYVHKA 848
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ P + ++ KV A N G G P S + + D P +AP+ +
Sbjct: 849 SD-----IPPLTEFQVKVKAFNVQGEG-PYSLTAIIYSAQDAPAEAPAVVEARALSAKAA 902
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV----VRIPSEFYYT 459
++SW PL + Y++ + + +E Q+ET +G++ ++ + YT
Sbjct: 903 TVSWMPLSYSNLDG----YQVKYWESGQSEGQAET------IGVSSRENHTKLENLRPYT 952
Query: 460 EYEVKVQAINDVGPGPES 477
EY ++V+ N G GP S
Sbjct: 953 EYIIEVRGYNSAGYGPPS 970
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 107/294 (36%), Gaps = 36/294 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+A +T C A P TY W +L + E + Y + L I +
Sbjct: 133 EAKITMNCRARANPPATYKW----KLDHMEIDLNAEGSHYSLAGGNLVISNPDKTVHVGK 188
Query: 64 YQCRAKNQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE----AA 116
Y C A N T R +S Q L L S ++ S Y EG + C P A
Sbjct: 189 YSCLATNTYGTVISREASVQFGYLDLFSSEER----SSVYVKEGQGAVLLCAPPPHYPAE 244
Query: 117 PKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTAT----------NVH 165
+++ + I RR + + GNL IS V D G YSC A+ N
Sbjct: 245 LSFRWILNEFPTFIIPDKRRFVSQITGNLYISKVDSSDRGNYSCIASSPSISKSVFSNYI 304
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
++ R I + P+ P T +N+ L C A + +V R
Sbjct: 305 PLEPQTERPIRKY-PADLRVKFPDTTALVGQNVTLECFALGNPVPEV---------RWKK 354
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D + + + G L + N F D G Y+C ++ GK V VE P
Sbjct: 355 IDGHLPSNHEVRMTGTQLHLYNVQFEDGGTYKCEAVNSKGKDYHTARVSVEAFP 408
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 29/175 (16%)
Query: 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGI 156
+T A G NVT+ C P P+ WKK DG++ + R L + V +D G
Sbjct: 327 DTTALVGQNVTLECFALGNPVPEVRWKKIDGHLPSNHEVR--MTGTQLHLYNVQFEDGGT 384
Query: 157 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ----LRCSAHTEELLDV 212
Y C A N G D R+ V P + E + + ++L+ + C A + +
Sbjct: 385 YKCEAVNSKGKDYHTARVSVEAFPEWVEHIS-----STEKDLRSDYTMSCKASGKPKPHI 439
Query: 213 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
W NG + D NE + ++ +F D+G Y+C+ ++ G I
Sbjct: 440 R--WLKNGEPV---DRNE------------MRFSSLTFDDSGMYQCIAENRHGVI 477
>gi|390475267|ref|XP_002758615.2| PREDICTED: contactin-4 isoform 1 [Callithrix jacchus]
Length = 1025
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 242/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL QDR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTQDRIQIEQGTLNITVVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELNVIAVGPDFSRTLLKRLTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E + G L
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDL 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 M-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 619
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 620 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 674
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 675 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 734
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 735 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 793
Query: 483 W 483
+
Sbjct: 794 Y 794
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ + +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDVHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + VI GP
Sbjct: 354 EPLLTQD-------RIQIEQGTLNITVVNLSDAGMYQCLAENKHGVIFSNAELNVIAVGP 406
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + V V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDVHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 333 VFW-ECKANGRPKPTYR 348
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 171/489 (34%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 599
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G ++ + P + IDG
Sbjct: 600 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTF 656
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 657 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 716
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 717 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRP 768
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 769 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLE 826
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 827 KNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGT 884
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 885 GPSSATVNV 893
>gi|344276063|ref|XP_003409829.1| PREDICTED: contactin-4 [Loxodonta africana]
Length = 1004
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 246/481 (51%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL QDR I+ +L + +N D M
Sbjct: 309 EENVFWECKANGRPKPTYRWLKNGE-------PLLTQDRIQIEQGMLNMTTVNLS-DAGM 360
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ ++SA+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 361 YQCVAENKHGVIFASAELSVIAVGPDFSRTLLKRVTLVKVGGEVIIECKPKASPKPVYTW 420
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R + E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 421 KKGRDIVRENERIIVSEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 479
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + WT NG I N D + E + G L
Sbjct: 480 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGRLIDFNKDGDHFERVGGDSAGDL 539
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 540 M-IRNIQLKHAGKYVCLVQTSVDKLSAAADLIVRGPPGPPEAVSIDEITDTTAQLSWRPG 598
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 599 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 653
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 654 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGY 713
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + +T+ + V R S ++ +EVKV N+ G G S + T+
Sbjct: 714 VVAFRPYGKKSWM-KTVMASADASRYVFRNESLSPFSPFEVKVGVFNNKGEGLFSPITTV 772
Query: 483 W 483
+
Sbjct: 773 Y 773
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 216 AAKGTTVKLECFALGNPVPTIIWRRVDGKPIARKARRHK-SNGILEIPNFQQEDAGLYEC 274
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+L P++ +++ I +A N+ C A+ Y W N
Sbjct: 275 VAENSRGKNVAKGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKN 331
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G+L +T + +DAG Y+CV ++ G I S + +VI G
Sbjct: 332 GEPLLTQD-------RIQIEQGMLNMTTVNLSDAGMYQCVAENKHGVIFASAELSVIAVG 384
Query: 278 P 278
P
Sbjct: 385 P 385
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 125/318 (39%), Gaps = 32/318 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG +++ + RY + + L I N +D YQC A
Sbjct: 28 SCEVKGNPKPHIRWKLNGTVVD-----IGMDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 82
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S +G + + C P A + + W +
Sbjct: 83 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPPHAGELSYAWIFNE 140
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------ 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 141 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMG 200
Query: 178 -HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ P Q P + A ++L C A + + IW +G I
Sbjct: 201 EYEPKIEVQFPETVPAAKGTTVKLECFALGNPVPTI--IWRRVDGKPIARKARR------ 252
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
+ G+LEI N DAG YECV +++ GK K + P + + V
Sbjct: 253 -HKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWIQKINDIHV-AIEE 310
Query: 296 TIQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 311 NVFW-ECKANGRPKPTYR 327
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + IG R + E
Sbjct: 6 IFVQEPSHVMFPLDSEE-----KKVRLSCEVKGNPKPHIRWKLNGTVVDIGMDFRYSVVE 60
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 61 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMV 120
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H EL +Y W N E P+ ++ + G L I
Sbjct: 121 LLCGPPPHAGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 165
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 166 SDVGNYTCVVTNTV------TNHKVLGPP 188
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 168/489 (34%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + +++ + +R + ++ ++R +N + D Y C A
Sbjct: 408 CKPKASPKPVYTWKKGRDIV-------RENERIIVSEDG-SLRIINVTKSDAGSYTCIAT 459
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G +
Sbjct: 460 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGRL 518
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 519 IDFNKDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCLVQTSVDKLSAAADLIVRGPPGPP 578
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G +N + P + IDG
Sbjct: 579 EAVSIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTF 635
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 636 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 695
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NG Y + R +W + + RY R E+ L P
Sbjct: 696 ITWETVPEELQNGGGF-GYVVAFRPYGKKSWMKTV--MASADASRYVFRNES-----LSP 747
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G SP + ++P + P I D+ + W P E
Sbjct: 748 FSPFEVKVGVFNNKGEGL-FSPITTVYSAEEEPTKPPPSIFARSLSATDIEVFWAS-PLE 805
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 806 KNIGRIQGYEVKYWRHDDKEENARKIRTIGNH--TSTKITNLKGSALYHLAVKAYNSAGT 863
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 864 GPSSATVNV 872
>gi|114585183|ref|XP_001138350.1| PREDICTED: contactin-4 isoform 4 [Pan troglodytes]
Length = 1026
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDPYERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVDTGM-----DFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 333 VFW-ECKANGRPKPTYR 348
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + +G R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + +++ ++ +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIV-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I +E G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPSSATVNV 894
>gi|326928158|ref|XP_003210248.1| PREDICTED: contactin-4-like [Meleagris gallopavo]
Length = 1063
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 241/481 (50%), Gaps = 14/481 (2%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C A G P +Y W ++GE PL Q R I+ LTIR ++ D M
Sbjct: 364 EENVFWECHASGRPKPSYRWLKDGE-------PLLPQGRVQIEQGSLTIRNVSLS-DAGM 415
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ T ++SA+L V+ + P F K L+ T GG V I C P+A+P+P + W
Sbjct: 416 YQCVAENRHGTIFASAELSVIAVGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPAYSW 475
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R + ++G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 476 KKGKDILRENERITVLDDGSLRIVNVTKSDTGSYTCVATNHFGTASSTGSLVV-KDPTRV 534
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I D + E G
Sbjct: 535 MVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFEKVGGQDSAGD 594
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + AG+Y C+V+++V KIS +IV GPPG P V + E+ T+A + W G
Sbjct: 595 LMIRSIQLKHAGKYVCMVQTSVDKISAAADLIVRGPPGPPEDVTIDEITDTTAQLSWRPG 654
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
A N PIT Y + ART ++ W VS EV GR + L PW YEF+V+
Sbjct: 655 ADNHSPITMYVVQARTPFSVGWQAVSTV---PEVIXIDGRTFTATVVGLNPWVEYEFRVV 711
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 712 AANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGY 771
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + +T+ + V R S ++ YEVKV N+ G G S V +
Sbjct: 772 VVAFRPFGTISWM-QTVVASPDASRYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVV 830
Query: 483 W 483
+
Sbjct: 831 Y 831
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 21/270 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T SW R + + +P + R + +L I E D +Y+C A+N
Sbjct: 281 CFALGNPVPTISWRR----ADGKQIP--RKARRHRSNGLLEIPNFQQE-DAGLYECVAEN 333
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ QL +P++ ++ S+ +A NV C+ PKP + W KDG +
Sbjct: 334 VRGKNVARGQL-TFYAQPNWIQKI--SDVHAAIEENVFWECHASGRPKPSYRWLKDGEPL 390
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYYEQLPPK 189
GR +I E G+L I VS D+G+Y C A N HG + L V+ GP + + L K
Sbjct: 391 LPQGRVQI-EQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSVIAVGPDFSKTLLKK 449
Query: 190 IT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+T + + + C AY W + G L E E + +D G L I N
Sbjct: 450 LTLVKVGGEVIIECKPKASP--RPAYSW-----KKGKDILRENERITV-LDDGSLRIVNV 501
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ +D G Y CV + G S+ +++V+ P
Sbjct: 502 TKSDTGSYTCVATNHFGTASSTGSLVVKDP 531
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
+ +G V + C P P W++ DG I RR NG L I ++D+G+Y C
Sbjct: 271 SAKGTAVKLECFALGNPVPTISWRRADGKQIPRKARRH-RSNGLLEIPNFQQEDAGLYEC 329
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A NV G + ++G+L P++ +++ + A N+ C H +Y W +
Sbjct: 330 VAENVRGKNVARGQLTFYAQPNWIQKI-SDVHAAIEENVFWEC--HASGRPKPSYRWLKD 386
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L + I+ G L I N S +DAG Y+CV ++ G I S + +VI G
Sbjct: 387 GEPL-------LPQGRVQIEQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSVIAVG 439
Query: 278 P 278
P
Sbjct: 440 P 440
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 176/491 (35%), Gaps = 41/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P YSW + ++L + +R + D+ ++R +N + D Y C A
Sbjct: 463 CKPKASPRPAYSWKKGKDIL-------RENERITVLDDG-SLRIVNVTKSDTGSYTCVAT 514
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + + F W +G++
Sbjct: 515 NHFGTASSTGSL-VVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHL 573
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 574 IDFEKDGDHFEKVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISAAADLIVRGPPGP 633
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R A + + + +G ++ + I IDG
Sbjct: 634 PEDVTIDEITDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEV-IXIDGRT 692
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S P P V K+
Sbjct: 693 FTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSEL 752
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NG Y + R +W V + RY R E+ L
Sbjct: 753 VITWETVPEELQNGGGF-GYVVAFRPFGTISWMQTV--VASPDASRYVFRNES-----LP 804
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S YE KV N G G SP + ++P +AP + D+ ISW P PR
Sbjct: 805 PFSPYEVKVGVYNNKGEGS-FSPVTVVYSAEEEPTRAPITVLARSLSATDIEISWAP-PR 862
Query: 413 EKQNAPNIY-YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
E Q+ I Y++ + ++ E + ++ GN A ++ + Y + V+A N
Sbjct: 863 ENQHKGRIQGYEVRCWRHDEKEETARKIRTVGNQTSA--KVTNLQGNALYHLAVKAYNTA 920
Query: 472 GPGPESEVVTI 482
G GP S +V +
Sbjct: 921 GTGPSSAMVNV 931
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 103/271 (38%), Gaps = 30/271 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P T W LN + + RY + L I N +D YQC A N
Sbjct: 82 CEVKGNPQPTIGW-----KLNGTNIDIGMDYRYSTVEGNLLINNPNKTQDTGTYQCVATN 136
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKKD 126
S A+L+ L+ +FK R + S +G + + C P +++ +
Sbjct: 137 PFGRIVSREAKLQFAYLE-NFKTR-VRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNEY 194
Query: 127 GNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-------- 177
+ + RR + E GNL I+ V D G Y+C TN G L
Sbjct: 195 PSFVHQDNRRFVSQETGNLYIAKVEASDVGNYTCVVTNTVTNSRVLGPPTPLILRNDGVM 254
Query: 178 --HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
+ P Q P + A ++L C A + +++ +G +I
Sbjct: 255 GEYEPKIEVQFPETVPSAKGTAVKLECFALGNPVPTISW-RRADGKQIPRKARRHR---- 309
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGK 266
GLLEI N DAG YECV ++ GK
Sbjct: 310 ---SNGLLEIPNFQQEDAGLYECVAENVRGK 337
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 87/207 (42%), Gaps = 32/207 (15%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NI-IGSGGRRKIFE 140
V +PS PL+SE V + C + P+P WK +G NI IG R E
Sbjct: 59 VFLQEPSSVIFPLDSEEK-----KVKLNCEVKGNPQPTIGWKLNGTNIDIGMDYRYSTVE 113
Query: 141 NGNLLIS-PVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNLLI+ P D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 114 -GNLLINNPNKTQDTGTYQCVATNPFGRIVSREAKLQFAYLENFKTRVRSTVSVRQGQGM 172
Query: 199 QLRCS--AHTEELLDVAYIWTHNG----VRIGNMDLNELETPNINIDGGLLEITNASFAD 252
L C H+ EL Y W N V N ET N L I +D
Sbjct: 173 VLLCGPPPHSGEL---TYAWIFNEYPSFVHQDNRRFVSQETGN-------LYIAKVEASD 222
Query: 253 AGEYECVVKSTVGKISTKTTVIVEGPP 279
G Y CVV +TV T V GPP
Sbjct: 223 VGNYTCVVTNTV------TNSRVLGPP 243
>gi|390475265|ref|XP_003734927.1| PREDICTED: contactin-4 [Callithrix jacchus]
Length = 697
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 242/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL QDR I+ L I +N D M
Sbjct: 2 EENVFWECKANGRPKPTYRWLKNGE-------PLLTQDRIQIEQGTLNITVVNLS-DAGM 53
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 54 YQCLAENKHGVIFSNAELNVIAVGPDFSRTLLKRLTLVKVGGEVVIECKPKASPKPVYTW 113
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E + G L
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDL 232
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 233 M-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 291
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 292 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 346
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 347 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 406
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 407 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 465
Query: 483 W 483
+
Sbjct: 466 Y 466
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 171/489 (34%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 101 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 152
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 153 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 211
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 212 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 271
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G ++ + P + IDG
Sbjct: 272 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTF 328
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 329 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 388
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 389 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRP 440
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 441 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLE 498
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 499 KNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGT 556
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 557 GPSSATVNV 565
>gi|193787073|dbj|BAG51896.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 2 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 53
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 54 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 113
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 232
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 233 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 292
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 293 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 347
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 348 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 407
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 408 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVSNNKGEGPFSPTTVV 466
Query: 483 W 483
+
Sbjct: 467 Y 467
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 101 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 152
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 153 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 211
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 212 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 271
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 272 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 328
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 329 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 388
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 389 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 440
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 441 PFSPFEVKVGVSNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 498
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 499 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 556
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 557 TGPSSATVNV 566
>gi|410036468|ref|XP_003950069.1| PREDICTED: contactin-4 [Pan troglodytes]
Length = 807
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 111 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 163 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDPYERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + +++ ++ +R I ++ +R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRDIV-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I +E G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 381 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 665
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 666 TGPSSATVNV 675
>gi|395824569|ref|XP_003785535.1| PREDICTED: contactin-4, partial [Otolemur garnettii]
Length = 1013
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 317 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 368
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 369 YQCVAENKHGIIFSSAELNVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 428
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +++ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 429 KKGRDVLRENERITISEDGNLRIVNVTKPDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 487
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 488 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGD 547
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 548 LMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 607
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 608 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 662
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 663 AANVIGIGEPSRPSERRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 722
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 723 VVAFRPYGKMSWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPPTVV 781
Query: 483 W 483
+
Sbjct: 782 Y 782
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 21/276 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
A + C A G P T +W R +++ P+ + R + +L I E D +Y
Sbjct: 228 ATVKLECFALGNPVPTITWRR------ADSKPIARKARRHKSNGILEIPNFQQE-DAGLY 280
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A+N + QL +P++ ++ S+ + NV C PKP + W
Sbjct: 281 ECVAENSRGKNVARGQL-TFYAQPNWIQK--ISDIHVAMEENVFWECKANGRPKPTYRWL 337
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL-IVLHGPSYY 183
K+G + + R +I E G L I+ V+ D+G+Y C A N HG+ S L ++ GP +
Sbjct: 338 KNGEPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGIIFSSAELNVIAVGPDFS 396
Query: 184 EQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L ++T + + + C Y W + G L E E I+ DG
Sbjct: 397 RTLLKRVTLVKVGGEVVIECKPKASP--KPVYTW-----KKGRDVLRENERITISEDGN- 448
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
L I N + DAG Y C+ + G S+ ++V+ P
Sbjct: 449 LRIVNVTKPDAGSYTCIATNHFGTASSTGNLVVKDP 484
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P W++ D I RR NG L I ++D+G+Y C
Sbjct: 225 AKGATVKLECFALGNPVPTITWRRADSKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 283
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 284 AENSRGKNVARGQLTFYAQPNWIQKI-SDIHVAMEENVFWECKANGRP--KPTYRWLKNG 340
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+CV ++ G I S + VI GP
Sbjct: 341 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGIIFSSAELNVIAVGP 393
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 121/316 (38%), Gaps = 30/316 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 37 CEVKGNPKPHIRWKLNGTDVD-----MGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATN 91
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 92 SFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 149
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVLHG----- 179
RR + E GNL I+ V + D G Y+C TN H + LI+ +
Sbjct: 150 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 209
Query: 180 --PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P Q P + A ++L C A + + W + ++
Sbjct: 210 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIT--WRRADSKPIARKARRHKS---- 263
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
G+LEI N DAG YECV +++ GK + + P ++ ++H
Sbjct: 264 --NGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQ--KISDIHVAMEEN 319
Query: 298 QWTDGATNGRPITHYK 313
+ + NGRP Y+
Sbjct: 320 VFWECKANGRPKPTYR 335
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + G R + E
Sbjct: 14 IFIQEPSNLMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDMGMDFRYSVVE 68
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 69 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 128
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 129 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 173
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 174 SDVGNYTCVVTNTV------TNHKVLGPP 196
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L + +R I ++ +R +N + D Y C A
Sbjct: 416 CKPKASPKPVYTWKKGRDVL-------RENERITISEDG-NLRIVNVTKPDAGSYTCIAT 467
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 468 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 526
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 527 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGP 586
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 587 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 643
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S + P P V K+
Sbjct: 644 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSERRRTEEALPEVTPANVSGGGGSKSEL 703
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R +W + + RY R E+ +
Sbjct: 704 VITWETVPEELQNGRGF-GYVVAFRPYGKMSWMLTV--LASADASRYVFRNES-----VR 755
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G S P+ Y+ ++P + P+ I D+ + W P
Sbjct: 756 PFSPFEVKVGVFNNKGEGPFSPPTVVYSA-DEEPTKPPANIFARSLSATDIEVFWAS-PL 813
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 814 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAG 871
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 872 TGPSSATVNV 881
>gi|410036466|ref|XP_003950068.1| PREDICTED: contactin-4 [Pan troglodytes]
Length = 697
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 241/483 (49%), Gaps = 21/483 (4%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 2 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 53
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 54 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASPKPVYTW 113
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 114 KKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--- 240
P + + ++ L C + LD+ + W+ NG I D + P + G
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI---DFDRDGDPYERVGGDSA 229
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W
Sbjct: 230 GDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWR 289
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+
Sbjct: 290 PGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFR 344
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN
Sbjct: 345 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 404
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R + L + V R S ++ +EVKV N+ G GP S
Sbjct: 405 GYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTT 463
Query: 481 TIW 483
++
Sbjct: 464 VVY 466
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 102/489 (20%), Positives = 171/489 (34%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + +++ ++ +R I ++ +R +N + D Y C A
Sbjct: 101 CKPKASPKPVYTWKKGRDIV-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 152
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 153 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 211
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I +E G+L+I + +G Y C + LIV P
Sbjct: 212 IDFDRDGDPYERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 271
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G ++ + P + IDG
Sbjct: 272 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTF 328
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 329 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 388
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 389 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHP 440
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 441 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLE 498
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 499 KNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGT 556
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 557 GPSSATVNV 565
>gi|332231553|ref|XP_003264959.1| PREDICTED: contactin-4 isoform 2 [Nomascus leucogenys]
Length = 1026
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE L + +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGEHLQT-------RDRIQIEQGTLNITMVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCVATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EHLQTRD-------RIQIEQGTLNITMVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 125/335 (37%), Gaps = 42/335 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVDTGM-----DFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 331
+ W + NGRP Y+ W EH+
Sbjct: 333 VFW-ECKANGRPKPTYR----------WLKNGEHL 356
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + +G R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 172/490 (35%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCVAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAG 884
Query: 473 PGPESEVVTI 482
GP S +V +
Sbjct: 885 TGPSSAIVNV 894
>gi|326668796|ref|XP_684096.5| PREDICTED: contactin-3-like [Danio rerio]
Length = 1026
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 240/489 (49%), Gaps = 27/489 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
M + +L W C+A G P +YSW +NGE L SE R I++ L+I LN D
Sbjct: 332 MSIEENLFWECKANGKPKPSYSWLKNGESLISE-------GRVQIENGALSIFSLNLS-D 383
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ YSSA+L VL PSF + PL A G +V++ C P A+P+
Sbjct: 384 GGMYQCVAENKHGIIYSSAELMVLASAPSFSQNPLSQTLKARSGSDVSLDCRPHASPRAI 443
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+WK+ I+ R +F NG L I+ +++ D G Y+C A N G + G+LI+ P
Sbjct: 444 SLWKRGTEILQRNERTFLFPNGTLKITNITKRDGGSYTCVAKNQFGTASTTGKLIITE-P 502
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ Q P I ++ L C + LDVA+ W NG I + D + E +
Sbjct: 503 TRISQSPSSTEITVGESVVLPCQVTADPALDVAFSWAFNGQPIDFHQDADHFERVGGSFS 562
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L+ I N G+Y C+V + V +S ++V+GPP P V V EV ++A + W
Sbjct: 563 GDLM-IRNIQLNHGGKYVCLVDTDVESLSADAILVVKGPPSPPDMVVVEEVTDSTAQLSW 621
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G NG PIT Y I RT + W + + G + L W YEF
Sbjct: 622 SPGQDNGSPITGYAIQGRTPFTVGW-----QAVDTVPEVINGNTLTATVVGLNAWVEYEF 676
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G GEPS PS + T P AP+ +GGGGG +L I+WEP+P E QN
Sbjct: 677 RVLASNSVGMGEPSPPSTKIRTEDSMPDAAPTDVGGGGGTKSELVITWEPVPEELQNGEG 736
Query: 420 IYYKIFWRKKNDTEF-----QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
Y I +R + + +L Y V R + ++ + VKV A N+ G G
Sbjct: 737 FGYIIAFRPVGMVTWTRVVISAPSLTRY------VFRNDTIPPFSPFNVKVGAFNNRGEG 790
Query: 475 PESEVVTIW 483
P S + T++
Sbjct: 791 PFSTIATVF 799
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 119/291 (40%), Gaps = 30/291 (10%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
Q + +CEA G P Y W NG L++ L +R + L I L+ ++D +
Sbjct: 46 QQEAVLSCEASGAPSPQYRWSLNGTLID-----LGGDERRRLSGGNLIITGLDRDQDSGV 100
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFV 122
YQC A N T S +FK + S EG V + C P + + F
Sbjct: 101 YQCTAFNTRGTILSQRATLQFAYLENFKTQ-TRSAVNVREGQGVVLLCGTPLHSGELTFT 159
Query: 123 W--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKGRLIVL 177
W + + + RR + E GNL I+ V D G Y+C N + S +VL
Sbjct: 160 WVFNEYPHFVQQDSRRFVSQETGNLYIAKVEPSDVGNYTCVVNNTITKERVFSSPTPLVL 219
Query: 178 HGPSYYEQLPPKI------TIAAHRN--LQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
+ PKI TI A + L+L C A + +++ R ++
Sbjct: 220 RNDGAMGEYEPKIELHFPDTIPAAKGSALKLECFALGNPVPRISW------RRTSDVSFP 273
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
N+++ N N +LEI + D G YEC+ +++ GK + + V P
Sbjct: 274 NKVKLKNSN---AILEIPSFQQEDTGTYECIAENSRGKNAARGRVSFHATP 321
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 191/506 (37%), Gaps = 64/506 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+D++ C P W R E+L ++ + + L I + +RD Y
Sbjct: 428 SDVSLDCRPHASPRAISLWKRGTEILQ------RNERTFLFPNGTLKITNIT-KRDGGSY 480
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFV 122
C AKNQ T ++ +L ++T + P +E GE +V + C A P F
Sbjct: 481 TCVAKNQFGTASTTGKL-IITEPTRISQSPSSTEITVGE--SVVLPCQVTADPALDVAFS 537
Query: 123 WKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLI 175
W +G I FE +G+L+I + + G Y C T+V + S ++
Sbjct: 538 WAFNGQPIDFHQDADHFERVGGSFSGDLMIRNIQLNHGGKYVCLVDTDVESL--SADAIL 595
Query: 176 VLHGPSYYEQLPPKITIA---AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
V+ GP PP + + QL S + + + G + ++
Sbjct: 596 VVKGPPS----PPDMVVVEEVTDSTAQLSWSPGQDNGSPITG-YAIQGRTPFTVGWQAVD 650
Query: 233 TPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGL 281
T I+G L T EYE + ++VG KI T+ ++ P +
Sbjct: 651 TVPEVINGNTLTATVVGLNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDSMPDAAPTDV 710
Query: 282 PGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
GG K+ I W + NG Y I R TW V + + R
Sbjct: 711 GGGGGT----KSELVITWEPVPEELQNGEGF-GYIIAFRPVGMVTWTRVV--ISAPSLTR 763
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
Y R + + P+S + KV A N G G P S + + P AP ++
Sbjct: 764 YVFRND-----TIPPFSPFNVKVGAFNNRGEG-PFSTIATVFSAEEVPSIAPEKVSAKSL 817
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRK--KNDTEFQSETLKEYGNVGIAVVRIPSEF 456
D+ ++WEP+ + Y ++W K DT + Y V ++ ++ +++
Sbjct: 818 SAADIEVTWEPIASIPERVLG-YEVVYWEDDTKPDTVGKVRITGNYTAVNVSGLQGNTQY 876
Query: 457 YYTEYEVKVQAINDVGPGPESEVVTI 482
Y + V A N G GP+S V I
Sbjct: 877 Y-----LAVCAFNTAGTGPQSAPVNI 897
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G + + C P P+ W++ ++ + N L I ++D+G Y C
Sbjct: 242 AAKGSALKLECFALGNPVPRISWRRTSDVSFPNKVKLKNSNAILEIPSFQQEDTGTYECI 301
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++GR + H ++ Q ++ NL C A+ + +Y W NG
Sbjct: 302 AENSRGKNAARGR-VSFHATPHWLQTMTDTAMSIEENLFWECKANGKP--KPSYSWLKNG 358
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ + + I+ G L I + + +D G Y+CV ++ G I + ++V
Sbjct: 359 ESL-------ISEGRVQIENGALSIFSLNLSDGGMYQCVAENKHGIIYSSAELMV 406
>gi|332688247|ref|NP_001193885.1| contactin-4 isoform d [Homo sapiens]
gi|19913548|gb|AAH26119.1| Contactin 4 [Homo sapiens]
Length = 697
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 242/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 2 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 53
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 54 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 113
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 172
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E + G L
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDL 232
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 233 M-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 291
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 292 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 346
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 347 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 406
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 407 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 465
Query: 483 W 483
+
Sbjct: 466 Y 466
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 171/489 (34%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 101 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 152
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 153 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 211
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 212 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 271
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G ++ + P + IDG
Sbjct: 272 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTF 328
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 329 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 388
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 389 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VHP 440
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 441 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLE 498
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 499 KNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAGT 556
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 557 GPSSATVNV 565
>gi|432866112|ref|XP_004070704.1| PREDICTED: contactin-4-like [Oryzias latipes]
Length = 1029
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 246/484 (50%), Gaps = 28/484 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ W C+A G P +Y W +NGE L+ P+ED R + D VLTIR LN D MYQC
Sbjct: 338 VVWECKASGKPKPSYRWLKNGESLD----PMED--RIEVNDGVLTIRSLN-LVDVGMYQC 390
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + +AQLRVL + P F + ++++T A +GG+V + C P +P+ W+K
Sbjct: 391 VAENKYGRIFCNAQLRVLAIAPDFSQNLVKAQTLARQGGDVLMECKPRMSPRGVISWRKG 450
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL-----IVLHGPS 181
I R + +NG+L +S V++ D+G+Y+C A N G+ S G L V+ P+
Sbjct: 451 EEAIRESHRVTVLDNGSLRLSNVTKADAGVYTCVARNQFGVASSAGSLSVKDATVITSPA 510
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINID 239
+ + + ++ L C + LD+ + W N + G E D
Sbjct: 511 GH------LDVTLGESIVLPCQVSHDPTLDLKFTWFFNEQLIHFGGRGAY-FEKAGGRSD 563
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
GG++ I N AG+Y C V++ V IS T V+V GPPG P QV+E+ +T+AT+ W
Sbjct: 564 GGIM-IRNIQLKHAGKYTCAVQTKVDSISIATDVVVRGPPGPPLDCQVIEMTETTATLSW 622
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PI Y I ART ++ W + + G+K ++ L PW YEF
Sbjct: 623 RPGTDNHSPILSYTIQARTPFSLGW-----QAVTTVPELPKGKKLSASVFELSPWVEYEF 677
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G GEPS PS + T P P+R+ GGGG +L I+WEP+P E Q+ P
Sbjct: 678 RVLATNSIGTGEPSKPSKKARTKETSPRVTPARVNGGGGGRSELVITWEPVPEELQSGPG 737
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R + + + V + S ++ Y+VKV N+ G GP S V
Sbjct: 738 FGYVVAFRPLGAPGWMQAAVTS-PDASKYVFKNESIPPFSPYQVKVGVYNNKGEGPFSPV 796
Query: 480 VTIW 483
++
Sbjct: 797 TILY 800
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 34/328 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+++ ++ ++CEA G P Y W LN + R+ + L IR+LN E D
Sbjct: 44 ESRKEVVFSCEAQGQPAPFYRW-----KLNDSYIHPNPGSRFSLMGGNLHIRHLNKEEDT 98
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAP 117
+YQC A N T S A L V L+ +FK + S EG V + C P
Sbjct: 99 GVYQCLASNSFGTIVSREANLHVAYLE-NFKTQ-RRSPVRVREGQGVVLLCGPPPHSGEL 156
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RL 174
++++ D + I R + + GNL I+ V D G Y+C TN +G
Sbjct: 157 TFRWIFNDDPSSIVQDTRLFVSQKTGNLYIAKVEPSDVGNYTCVVTNTVTKSSVRGPPTP 216
Query: 175 IVLHG--------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+VL P Q P I +A ++L C A + +++ + +
Sbjct: 217 LVLRADGVMGEYEPKIEVQFPEVIHVANSSTVKLECFALGNPVPKISWRRLDDAPFGRKV 276
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
+NE G+LEI +AG YEC+ +++ G+ S + + P L V+
Sbjct: 277 KVNEA--------FGVLEIPYFQQENAGIYECLAENSRGRNSVRGKLTFYASPQLI--VK 326
Query: 287 VVEVHKT-SATIQWTDGATNGRPITHYK 313
+V KT T+ W A+ G+P Y+
Sbjct: 327 PQDVQKTIDDTVVWECKAS-GKPKPSYR 353
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S Y+ KV N G G P SP + ++P +AP+R+ ++ +SW+PLP
Sbjct: 774 PFSPYQVKVGVYNNKGEG-PFSPVTILYSAEEEPTRAPTRLRARSISAAEIDVSWKPLPW 832
Query: 413 EKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRI--PSEFYYTEYEVKVQAIN 469
+ Y++ +WR+K + + ++ GN V+R S YY + ++A N
Sbjct: 833 SNNRRRILGYELWYWREKQKQD-AATVIRTVGNKTSVVIRDLEGSSTYY----ISLRAYN 887
Query: 470 DVGPGPESEVVTI 482
G GP+S +V +
Sbjct: 888 SAGVGPQSSIVNV 900
>gi|297285374|ref|XP_001101217.2| PREDICTED: contactin-4-like isoform 2 [Macaca mulatta]
Length = 807
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 111 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 163 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRITLVKVGGEVVIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 381 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAG 665
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 666 TGPSSATVNV 675
>gi|441665503|ref|XP_004091815.1| PREDICTED: contactin-4 [Nomascus leucogenys]
Length = 807
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE L + +DR I+ L I +N D M
Sbjct: 111 EENVFWECKANGRPKPTYRWLKNGEHLQT-------RDRIQIEQGTLNITMVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 163 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCVATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EHLQTRD-------RIQIEQGTLNITMVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 172/490 (35%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCVAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 381 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAG 665
Query: 473 PGPESEVVTI 482
GP S +V +
Sbjct: 666 TGPSSAIVNV 675
>gi|355559495|gb|EHH16223.1| Brain-derived immunoglobulin superfamily protein 2 [Macaca mulatta]
gi|355746563|gb|EHH51177.1| Brain-derived immunoglobulin superfamily protein 2 [Macaca
fascicularis]
Length = 1026
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRITLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 333 VFW-ECKANGRPKPTYR 348
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPSSATVNV 894
>gi|45382937|ref|NP_989943.1| contactin-5 precursor [Gallus gallus]
gi|55976559|sp|Q90W79.1|CNTN5_CHICK RecName: Full=Contactin-5; AltName: Full=F11 axonin-1-related
protein 2; Short=FAR-2; Flags: Precursor
gi|15216160|emb|CAC51431.1| FAR-2 protein [Gallus gallus]
Length = 1027
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 237/483 (49%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C+A G P TY W +NG +PL Q R + ++VL IR +N D
Sbjct: 328 LDSGEQLRWECKATGKPRPTYRWLKNG-------VPLWPQSRIEMINSVLMIRTVNIS-D 379
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ T Y+SA+L++L P+F + +G V I C P+A+PKP
Sbjct: 380 AGMYQCLAENKYGTIYASAELKILASAPTFPLNQMRKTIIITKGQEVVIECKPQASPKPT 439
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I G+L I S+ D G YSC NV G E + V P
Sbjct: 440 ITWKKGDKALRESKRVTILPQGSLRILNASKSDEGRYSCRGVNVFGSAEIVASVSVKE-P 498
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P KI + ++ L C A + LDV + WT NG I + + E+
Sbjct: 499 TRIELTPKKIELTVGESIVLSCKALHDSTLDVTFYWTLNGQPIDFDKEDGHFESIKAQAS 558
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++ +S +T ++V GPPG PG V V E+ T+AT+ W
Sbjct: 559 SADLMIRNILLMHAGRYGCRVQTAADAVSDETELLVRGPPGPPGVVIVEEITDTTATLSW 618
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ GA N PI+ Y + AR+ ++ W + D +G E+++ L PW YEF
Sbjct: 619 SPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPDVISGDMESAMAVELNPWVEYEF 673
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G G+PS+PS T P P+ + G G+ +L I+WEP+ E QN
Sbjct: 674 RVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEG 733
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S +
Sbjct: 734 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPI 792
Query: 480 VTI 482
V I
Sbjct: 793 VVI 795
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 108/279 (38%), Gaps = 33/279 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C+A G P TY W RNG ++ +E RY + + L I N +D
Sbjct: 43 EKKVSLNCQAHGSPTPTYRWLRNGTEID-----VESDYRYSLIEGSLIISNPNEMKDSGQ 97
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFV 122
YQC N + S + +F R S EG V + C+P +P+ +
Sbjct: 98 YQCLTTNMFGSILSREAVLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPLHSPEIIYS 156
Query: 123 W--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
W + + + RR I E GNL IS V D G Y C T TN + +
Sbjct: 157 WVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMD 227
G P P +T A +++ C A + +++ + HN +
Sbjct: 217 RNDGVMGEYEPKIEVHFPYTVTAARGTTVKMECFALGNPVPTISWKKVNGHNPSKA---- 272
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ +LEI N DAG YEC +++ G+
Sbjct: 273 -------RLRKSQAVLEIPNVQLEDAGMYECKAENSRGR 304
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 102/276 (36%), Gaps = 26/276 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 151 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 206
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKK-DG 127
+ LTL+ E + A G V + C P P WKK +G
Sbjct: 207 VLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTAARGTTVKMECFALGNPVPTISWKKVNG 266
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ RK L I V +D+G+Y C A N G + +G+L V P + E+L
Sbjct: 267 HNPSKARLRK--SQAVLEIPNVQLEDAGMYECKAENSRGRNVFRGQLQVYTYPQWVEKL- 323
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + L+ C A + Y W NGV + I + +L I
Sbjct: 324 NDTELDSGEQLRWECKATGKP--RPTYRWLKNGVPLWPQS-------RIEMINSVLMIRT 374
Query: 248 ASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 282
+ +DAG Y+C+ ++ G I + I+ P P
Sbjct: 375 VNISDAGMYQCLAENKYGTIYASAELKILASAPTFP 410
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 160
E V++ C +P P + W ++G I S R + E ++ +P DSG Y C
Sbjct: 42 EEKKVSLNCQAHGSPTPTYRWLRNGTEIDVESDYRYSLIEGSLIISNPNEMKDSGQYQCL 101
Query: 161 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 217
TN+ G S+ ++ + ++ + +++ + + L CS H+ E++ Y W
Sbjct: 102 TTNMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEII---YSWV 158
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
N + E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 159 FNEF---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 202
>gi|194221125|ref|XP_001915937.1| PREDICTED: contactin-4 isoform 1 [Equus caballus]
Length = 1026
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 239/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE L + Q+R I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGEALLT-------QERIQIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ L P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCVAENKHGVIFSSAELSVIALGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILRENERISISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V++TV K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S + +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKIIWMLTVLAS-ADASRYVFRNESVRPFFPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ L I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EAL-------LTQERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIALGP 406
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 124/317 (39%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L+ +FK R S +G + + C P A + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGTTVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AIEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 333 VFW-ECKANGRPKPTYR 348
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIQEPSHVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L + +R I ++ ++R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIL-------RENERISISEDG-SLRIVNVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKIIWMLTV--LASADASRYVFRNES-----VR 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFFPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PI 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPSSATVNV 894
>gi|281346450|gb|EFB22034.1| hypothetical protein PANDA_004020 [Ailuropoda melanoleuca]
Length = 1021
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 325 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 376
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 377 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 436
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 437 KKGRDILRENERITISEDGSLKIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 495
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 496 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGD 555
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 556 LMIRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 615
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 616 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 670
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 671 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 730
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 731 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 789
Query: 483 W 483
+
Sbjct: 790 Y 790
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 233 AKGTTVRLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 291
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 292 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 348
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 349 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 401
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 123/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 45 CEVKGNPKPHIRWKLNGTDVD-----IGVDFRYSVVEGSLLINNPNKTQDAGTYQCIATN 99
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L+ +FK R S +G + + C P A + + + W +
Sbjct: 100 SFGTVVSREAKLQFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNEY 157
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 158 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 217
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P P + A ++L C A + + IW +G I
Sbjct: 218 YEPKIEVHFPEMVPTAKGTTVRLECFALGNPVPTI--IWRRADGKPIARKARR------- 268
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 269 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AIEEN 327
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 328 VFW-ECKANGRPKPTYR 343
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL SE V + C + PKP WK +G IG R + E
Sbjct: 22 VFIQEPSHVMFPLNSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVE 76
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 77 GSLLINNPNKTQDAGTYQCIATNSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQGQGMV 136
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 137 LLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 181
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 182 SDVGNYTCVVTNTV------TNHKVLGPP 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 169/489 (34%), Gaps = 40/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P Y+W + ++L E++ +D L I + + D Y C A N
Sbjct: 424 CKPKASPKPVYTWKKGRDILR------ENERITISEDGSLKIVNVT-KSDAGSYTCIATN 476
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
T S+ L V+ P + GE + + + F W +G++I
Sbjct: 477 HFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 535
Query: 131 GSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
FE G+L+I + +G Y C + LIV P
Sbjct: 536 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPP 595
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G +N + P + IDG
Sbjct: 596 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTF 652
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 653 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 712
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 713 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRP 764
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 765 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PME 822
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 823 KNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGT 880
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 881 GPSSATVNV 889
>gi|410951600|ref|XP_003982482.1| PREDICTED: contactin-4, partial [Felis catus]
Length = 1021
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ +L I +N D M
Sbjct: 325 EENVFWECKANGRPKPTYRWLKNGE-------PLFTRDRIQIEQGMLNITVVNLS-DAGM 376
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ P F + L+ T GG V I C P+A+PKP + W
Sbjct: 377 YQCVAENKHGVIFSSAELSVIAAGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 436
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 437 KKGRDILRENERITISEDGSLRIVNVTKSDAGSYTCVATNHFGTASSTGNLVV-KDPTRV 495
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 496 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGD 555
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 556 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 615
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 616 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTAAVVGLNPWVEYEFRTV 670
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 671 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 730
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 731 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 789
Query: 483 W 483
+
Sbjct: 790 Y 790
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 21/270 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T W R ++ P+ + R +L I E D +Y+C A+N
Sbjct: 242 CFALGNPVPTIIWRR------ADGKPIARKARRHKSSGILEIPNFQQE-DAGLYECVAEN 294
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ QL +P++ + ++T+ NV C PKP + W K+G +
Sbjct: 295 SRGKNVARGQL-TFYAQPNWIQEI--NDTHVAIEENVFWECKANGRPKPTYRWLKNGEPL 351
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL-IVLHGPSYYEQLPPK 189
+ R +I E G L I+ V+ D+G+Y C A N HG+ S L ++ GP + L +
Sbjct: 352 FTRDRIQI-EQGMLNITVVNLSDAGMYQCVAENKHGVIFSSAELSVIAAGPDFSRTLLKR 410
Query: 190 IT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+T + + + C Y W + G L E E I+ DG L I N
Sbjct: 411 VTLVKVGGEVVIECKPKASP--KPVYTW-----KKGRDILRENERITISEDGS-LRIVNV 462
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ +DAG Y CV + G S+ ++V+ P
Sbjct: 463 TKSDAGSYTCVATNHFGTASSTGNLVVKDP 492
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR +G L I ++D+G+Y C
Sbjct: 233 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SSGILEIPNFQQEDAGLYECV 291
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ +A N+ C A+ Y W NG
Sbjct: 292 AENSRGKNVARGQLTFYAQPNWIQEI-NDTHVAIEENVFWECKANGRP--KPTYRWLKNG 348
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G+L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 349 EPLFTRD-------RIQIEQGMLNITVVNLSDAGMYQCVAENKHGVIFSSAELSVIAAGP 401
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 127/320 (39%), Gaps = 38/320 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 45 CEVKGNPKPHIRWKLNGTDVD-----IGVDFRYSVVEGSLLINNPNKTQDAGTYQCIATN 99
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L+ +FK R S +G + + C P A + + + W +
Sbjct: 100 SFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNEY 157
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 158 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 217
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I +
Sbjct: 218 YEPKIEVQFPEMVPTAKGTTVKLECFALGNPVPTI--IWRRADGKPIARKARRHKSS--- 272
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G+LEI N DAG YECV +++ GK + + P + E++ T
Sbjct: 273 ----GILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNW-----IQEINDTHVA 323
Query: 297 IQ---WTDGATNGRPITHYK 313
I+ + + NGRP Y+
Sbjct: 324 IEENVFWECKANGRPKPTYR 343
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL SE V + C + PKP WK +G IG R + E
Sbjct: 22 VFIQEPSHVMFPLNSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVE 76
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 77 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMV 136
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 137 LLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 181
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 182 SDVGNYTCVVTNTV------TNHKVLGPP 204
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L + +R I ++ ++R +N + D Y C A
Sbjct: 424 CKPKASPKPVYTWKKGRDIL-------RENERITISEDG-SLRIVNVTKSDAGSYTCVAT 475
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 476 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 534
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 535 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 594
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 595 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 651
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
EYE V + +G + S K P P V K+
Sbjct: 652 FTAAVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 711
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 712 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 763
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 764 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PM 821
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 822 EKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAG 879
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 880 TGPSSATVNV 889
>gi|338714491|ref|XP_003363091.1| PREDICTED: contactin-4 isoform 2 [Equus caballus]
Length = 807
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 239/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE L + Q+R I+ L I +N D M
Sbjct: 111 EENVFWECKANGRPKPTYRWLKNGEALLT-------QERIQIEQGTLNITIVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ L P F + L+ T GG V I C P+A+PKP + W
Sbjct: 163 YQCVAENKHGVIFSSAELSVIALGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRDILRENERISISEDGSLRIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V++TV K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S + +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKIIWMLTVLAS-ADASRYVFRNESVRPFFPFEVKVGVFNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ L I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 135 EAL-------LTQERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIALGP 187
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L + +R I ++ ++R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRDIL-------RENERISISEDG-SLRIVNVTKSDAGSYTCIAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 381 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKIIWMLTV--LASADASRYVFRNES-----VR 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFFPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PI 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAG 665
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 666 TGPSSATVNV 675
>gi|395733521|ref|XP_002813554.2| PREDICTED: LOW QUALITY PROTEIN: contactin-4 isoform 2 [Pongo
abelii]
Length = 1026
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 242/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 331 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 382
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 383 YQCLAENKHGVIFSNAELNVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 442
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C A+N G S G L+V P+
Sbjct: 443 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIASNHFGTASSTGNLVV-KDPTRV 501
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E + G L
Sbjct: 502 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDL 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 562 M-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 239 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 297
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 298 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 354
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + VI GP
Sbjct: 355 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELNVIAVGP 407
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 111/286 (38%), Gaps = 27/286 (9%)
Query: 42 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETY 100
RY + + L I N +D YQC A N T S A+L+ L +FK R S
Sbjct: 77 RYSVVEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLD-NFKTR-TRSTVS 134
Query: 101 AGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 158
G + + C P + + + W + RR + E GNL I+ V + D G Y+
Sbjct: 135 VRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYT 194
Query: 159 CTATNV---HGMDESKGRLIVL-------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 208
C TN H + LI+ + P Q P + A ++L C A
Sbjct: 195 CVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGATVKLECFALGNP 254
Query: 209 LLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
+ + IW +G I + G+LEI N DAG YECV +++ GK
Sbjct: 255 VPTI--IWRRADGKPIARKARR-------HKSNGILEIPNFQQEDAGLYECVAENSRGKN 305
Query: 268 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 313
+ + P + + V + W + NGRP Y+
Sbjct: 306 VARGQLTFYAQPNWIQKINDIHV-AMEENVFW-ECKANGRPKPTYR 349
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 38/211 (18%)
Query: 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKI 138
LR +PS PL+SE V + C + KP WK +G + +G R +
Sbjct: 26 LRCFIQEPSPVMFPLDSEE-----KKVKLNCEVKEIQKPHIRWKLNGTDVDTGMDFRYSV 80
Query: 139 FENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRN 197
E L+ +P D+G Y CTATN G S+ +L + ++ + +++ +
Sbjct: 81 VEGSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQG 140
Query: 198 LQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNA 248
+ L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 141 MVLLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKV 185
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 186 EKSDVGNYTCVVTNTV------TNHKVLGPP 210
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 171/489 (34%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 430 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAS 481
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 482 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 540
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 541 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G ++ + P + IDG
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTF 657
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 658 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 717
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 718 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRP 769
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 770 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLE 827
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 828 KNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGT 885
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 886 GPSSATVNV 894
>gi|291408740|ref|XP_002720672.1| PREDICTED: contactin 4-like [Oryctolagus cuniculus]
Length = 1049
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 237/476 (49%), Gaps = 17/476 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C A G P TY W +NGE PL +DR I+ L I +N D MYQC A
Sbjct: 359 WECRANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITVVNLS-DAGMYQCVA 410
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+LRV+ P F + L+ T GG I CNP+A+PKP + WKK +
Sbjct: 411 ENEHGAAFSSAELRVIAAGPDFSRTLLKRVTLVRVGGEAAIECNPKASPKPVYTWKKGRD 470
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
++ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+ P
Sbjct: 471 VLRESERITISEDGDLRIVNVTKADTGSYTCIATNHFGTASSTGNLVV-KDPTRVTVPPS 529
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITN 247
+ + ++ L C + LD+ + W+ NG R+ + D + + D G L I N
Sbjct: 530 SMDVTVGESIVLPCQVTHDHSLDIVFAWSFNG-RLIDFDKDGDHFERVGGDSAGDLMIRN 588
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG Y C+V+++V ++S ++V GPPG P V + E+ ++A + W G N
Sbjct: 589 IQLTHAGRYVCMVQTSVDRLSVTADLVVRGPPGPPEAVTIDEITDSTAQLSWRPGPDNHS 648
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
P+T Y I ART ++ W VS + + +D GR + L PW YEF+ +A N +
Sbjct: 649 PVTTYIIQARTPFSVGWQAVS--TVPELID---GRTFTATVVGLSPWVEYEFRTVAANVI 703
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 704 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 763
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 764 PYGKMIWMLTVLAS-ADACRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPPTVVY 818
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G V + C P P W++ DG + RR +G L I ++D+G+Y C A
Sbjct: 264 GATVKLECFALGNPVPTITWRRADGKPLARKSRRHK-SSGVLEIPNFQQEDAGLYECVAE 322
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + +G+L PS+ +++ I +A ++ C A+ Y W NG
Sbjct: 323 NSRGKNVVRGQLTFYAQPSWIQKI-NDIHVAMEESVFWECRANGRP--KPTYRWLKNGEP 379
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+CV ++ G S + VI GP
Sbjct: 380 LLTRD-------RIQIEQGTLNITVVNLSDAGMYQCVAENEHGAAFSSAELRVIAAGP 430
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 24/202 (11%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
V +PS PL+SE V + C E PKP WK +G IG R + E
Sbjct: 51 VFVQEPSHVMFPLDSEER-----KVKLSCEAEGTPKPLIRWKLNGTDVDIGMDFRYSVVE 105
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 106 GSLLINNPNKTQDAGTYQCIATNSFGTVVSREAKLQFAYLENFRTRTRSTVSVRRGQGMV 165
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
L C+ H+ EL +Y W N R D ++ + G L I +D G Y
Sbjct: 166 LLCAPPPHSGEL---SYAWIFNE-RPSYQDSRRF----VSQETGNLYIAKVEPSDVGNYT 217
Query: 258 CVVKSTVGKISTKTTVIVEGPP 279
CVV +TV T V GPP
Sbjct: 218 CVVTNTV------TNQRVLGPP 233
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 173/498 (34%), Gaps = 59/498 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLN-SETLPL-EDQDRYFIQDNVLTIRYLNPER-DPAMYQCR 67
C P Y+W + ++L SE + + ED D +R +N + D Y C
Sbjct: 453 CNPKASPKPVYTWKKGRDVLRESERITISEDGD----------LRIVNVTKADTGSYTCI 502
Query: 68 AKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
A N T S+ L V +T+ PS + GE + + + F
Sbjct: 503 ATNHFGTASSTGNLVVKDPTRVTVPPS------SMDVTVGESIVLPCQVTHDHSLDIVFA 556
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G +I FE G+L+I + +G Y C L+V
Sbjct: 557 WSFNGRLIDFDKDGDHFERVGGDSAGDLMIRNIQLTHAGRYVCMVQTSVDRLSVTADLVV 616
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + L R + I +G ++ + P +
Sbjct: 617 RGPPGPPEAVTIDEITDSTAQLSWRPGPDNHSPVTTYIIQARTPFSVGWQAVSTV--PEL 674
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVE 289
IDG T + EYE V + +G + S K P P V
Sbjct: 675 -IDGRTFTATVVGLSPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGG 733
Query: 290 VHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
K+ I W + NGR Y + R W + + RY R E+
Sbjct: 734 GSKSELVITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADACRYVFRNES- 789
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ P+S +E KV N G G S P+ Y+ ++P + P+ I D+ +
Sbjct: 790 ----VRPFSPFEVKVGVFNNKGEGPFSPPTVVYSA-DEEPTKPPASIFARSLSATDIEVF 844
Query: 407 WEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEFYYTEYEVK 464
W P EK Y++ +WR + D E + ++ GN + + Y +
Sbjct: 845 WAS-PLEKNRGRIQGYEVKYWRHE-DKEENARKIRTIGNQTSTTITNLQGSAL---YHLA 899
Query: 465 VQAINDVGPGPESEVVTI 482
V+A N G GP S V +
Sbjct: 900 VKAYNSAGTGPASATVNV 917
>gi|157909807|ref|NP_001103219.1| contactin-4 isoform 1 precursor [Mus musculus]
gi|55976372|sp|Q69Z26.2|CNTN4_MOUSE RecName: Full=Contactin-4; AltName: Full=Brain-derived
immunoglobulin superfamily protein 2; Short=BIG-2;
Flags: Precursor
Length = 1026
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 231/476 (48%), Gaps = 16/476 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 335 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 387 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +IV P+ P
Sbjct: 447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W + D G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 741 PHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVY 795
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 278 P 278
P
Sbjct: 406 P 406
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 34/319 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + D L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKINGTDVD-----IGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYE 184
RR + E GNL I+ V + D G Y+C TN + G ++L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMG 221
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I
Sbjct: 222 EYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR------ 273
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTS 294
+ G+LEI N DAG YECV +++ GK K + P VQ++ ++H
Sbjct: 274 -HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAM 329
Query: 295 ATIQWTDGATNGRPITHYK 313
+ + NGRP Y+
Sbjct: 330 EESVFWECKANGRPKPTYR 348
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + +
Sbjct: 27 VFVQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVD 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 173/491 (35%), Gaps = 44/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + E+L + +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPRPVYTWRKGREIL-------RENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N T S+ V+ P+ P S + GE + + + F W +G+
Sbjct: 481 NHFGTASSTGN--VIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGH 538
Query: 129 IIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+I FE G+L+I + +G Y C LIV P
Sbjct: 539 LIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPG 598
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L R + + I +G +N + P++ +DG
Sbjct: 599 PPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PDL-VDGK 655
Query: 242 LLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
T EYE V + +G + S K P P V K+
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 295 ATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
I W + NGR Y + R + W + + RY R E+ +
Sbjct: 716 LVITWETVPEELQNGRGF-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----V 767
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W
Sbjct: 768 RPFSPFEVKVGVFNNKGEG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPI 826
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ + Y +WR +D E ++ ++ GN +I + Y + V+A N
Sbjct: 827 GKNRGRIQGYEVKYWRH-DDKEENAKKIRTVGNQ--TSTKITNLKGSALYHLSVKAYNSA 883
Query: 472 GPGPESEVVTI 482
G GP S V +
Sbjct: 884 GTGPSSATVNV 894
>gi|50511265|dbj|BAD32618.1| mKIAA3024 protein [Mus musculus]
Length = 898
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 231/476 (48%), Gaps = 16/476 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 207 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 258
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 259 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 318
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +IV P+ P
Sbjct: 319 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTKVMVPPS 377
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 378 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 437
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 438 IQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 497
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W + D G+ + L PW YEF+ +A N +
Sbjct: 498 PITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVI 552
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 553 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 612
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 613 PHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVY 667
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 109 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 167
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 168 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 224
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 225 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 277
Query: 278 P 278
P
Sbjct: 278 P 278
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 173/491 (35%), Gaps = 44/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + E+L + +R I ++ +R +N + D Y C A
Sbjct: 301 CKPKASPRPVYTWRKGREIL-------RENERITISEDG-NLRIINVTKSDAGSYTCIAT 352
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N T S+ V+ P+ P S + GE + + + F W +G+
Sbjct: 353 NHFGTASSTGN--VIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGH 410
Query: 129 IIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+I FE G+L+I + +G Y C LIV P
Sbjct: 411 LIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPG 470
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L R + + I +G +N + P++ +DG
Sbjct: 471 PPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PDL-VDGK 527
Query: 242 LLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
T EYE V + +G + S K P P V K+
Sbjct: 528 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 587
Query: 295 ATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
I W + NGR Y + R + W + + RY R E+ +
Sbjct: 588 LVITWETVPEELQNGRGF-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----V 639
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W
Sbjct: 640 RPFSPFEVKVGVFNNKGEG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPI 698
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ + Y +WR +D E ++ ++ GN +I + Y + V+A N
Sbjct: 699 GKNRGRIQGYEVKYWRH-DDKEENAKKIRTVGNQ--TSTKITNLKGSALYHLSVKAYNSA 755
Query: 472 GPGPESEVVTI 482
G GP S V +
Sbjct: 756 GTGPSSATVNV 766
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 140 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 191
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 47 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 106
Query: 192 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 107 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR-------HKSNGILEIPNF 157
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 307
DAG YECV +++ GK K + P VQ++ ++H + + NGR
Sbjct: 158 QQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 214
Query: 308 PITHYK 313
P Y+
Sbjct: 215 PKPTYR 220
>gi|441665500|ref|XP_004091814.1| PREDICTED: contactin-4 [Nomascus leucogenys]
Length = 697
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 242/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE L + +DR I+ L I +N D M
Sbjct: 2 EENVFWECKANGRPKPTYRWLKNGEHLQT-------RDRIQIEQGTLNITMVNLS-DAGM 53
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 54 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 113
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 114 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCVATNHFGTASSTGNLVV-KDPTRV 172
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E + G L
Sbjct: 173 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDL 232
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 233 M-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 291
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 292 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 346
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 347 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 406
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 407 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 465
Query: 483 W 483
+
Sbjct: 466 Y 466
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 172/489 (35%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 101 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCVAT 152
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 153 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 211
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 212 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 271
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G ++ + P + IDG
Sbjct: 272 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKTF 328
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 329 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 388
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 389 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRP 440
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 441 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLE 498
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 499 KNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGT 556
Query: 474 GPESEVVTI 482
GP S +V +
Sbjct: 557 GPSSAIVNV 565
>gi|301760363|ref|XP_002915992.1| PREDICTED: contactin-4-like [Ailuropoda melanoleuca]
Length = 1110
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 242/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 415 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 466
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 467 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 526
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 527 KKGRDILRENERITISEDGSLKIVNVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 585
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E + G L
Sbjct: 586 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGDSAGDL 645
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 646 M-IRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 704
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 705 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 759
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 760 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 819
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 820 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 878
Query: 483 W 483
+
Sbjct: 879 Y 879
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 323 AKGTTVRLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 381
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 382 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 438
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 439 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 491
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 124/317 (39%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 135 CEVKGNPKPHIRWKLNGTDVD-----IGVDFRYSVVEGSLLINNPNKTQDAGTYQCIATN 189
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L+ +FK R S +G + + C P A + + + W +
Sbjct: 190 SFGTVVSREAKLQFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNEY 247
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQ 185
RR + E GNL I+ V + D G Y+C TN + G ++L +
Sbjct: 248 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 307
Query: 186 LPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
PKI + A ++L C A + + IW +G I
Sbjct: 308 YEPKIEVHFPEMVPTAKGTTVRLECFALGNPVPTI--IWRRADGKPIARKARR------- 358
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 359 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AIEEN 417
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 418 VFW-ECKANGRPKPTYR 433
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL SE V + C + PKP WK +G IG R + E
Sbjct: 112 VFIQEPSHVMFPLNSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVE 166
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 167 GSLLINNPNKTQDAGTYQCIATNSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQGQGMV 226
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 227 LLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 271
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 272 SDVGNYTCVVTNTV------TNHKVLGPP 294
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 169/488 (34%), Gaps = 39/488 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P Y+W + ++L E++ +D L I + + D Y C A N
Sbjct: 514 CKPKASPKPVYTWKKGRDILR------ENERITISEDGSLKIVNVT-KSDAGSYTCIATN 566
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
T S+ L V+ P + GE + + + F W +G++I
Sbjct: 567 HFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 625
Query: 131 GSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
FE G+L+I + +G Y C + LIV P E
Sbjct: 626 DFDKDGDHFERVGGDSAGDLMIRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPPE 685
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ L R + + I +G +N + P + IDG
Sbjct: 686 AVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTFT 742
Query: 245 ITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
T EYE V + +G + S K P P V K+ I
Sbjct: 743 ATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVI 802
Query: 298 QWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
W + NGR Y + R W + + RY R E+ + P+
Sbjct: 803 TWETVPEELQNGRGFG-YVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRPF 854
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
S +E KV N G G P SP+ + ++P + P+ I D+ + W P EK
Sbjct: 855 SPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PMEK 912
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
Y++ + + +D E + ++ GN +I + Y + V+A N G G
Sbjct: 913 NRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNTAGTG 970
Query: 475 PESEVVTI 482
P S V +
Sbjct: 971 PSSATVNV 978
>gi|348510473|ref|XP_003442770.1| PREDICTED: contactin-3-like [Oreochromis niloticus]
Length = 1076
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 239/481 (49%), Gaps = 18/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +L W C+A G P +YSW +NGE + ++ R I++ L+I LN D M
Sbjct: 336 EGNLFWECKANGKPKPSYSWLKNGEQVMAD-------GRVQIENGALSISSLN-RSDSGM 387
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ YSSAQL VL P+F K PL + A G VT+ C P+A+P +W
Sbjct: 388 YQCVAENKHGIIYSSAQLMVLASPPTFSKSPLRALLKARSGSEVTLECKPQASPPAISLW 447
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R + +G L I+ V++ D+ Y+C A N G + GRLIV P+
Sbjct: 448 KKGNEILQRTERIALLPDGTLKIANVTKRDAASYTCIAKNQFGTASTTGRLIVTE-PTRI 506
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + I ++ L C ++ LDV++ W NG I D + E +I G L
Sbjct: 507 TMRPTNMEIIVGESIVLPCQIASDPALDVSFSWAFNGQLIDFQRDSDHFERVGGSISGDL 566
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N G+Y CV+ + V +ST ++V+GPPG P V V E+ ++A + WT G
Sbjct: 567 M-IRNIQLNHGGKYVCVIDTDVESLSTSAILVVKGPPGPPDKVSVEEITDSTAQLSWTPG 625
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
NG PIT Y + ART + W + + G + L W YEF+V+
Sbjct: 626 RDNGSPITGYIVQARTPFTVGW-----QAVDTVPEVVNGNMLTATVVGLNAWVEYEFRVV 680
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS S + T P AP+ +GGGGG +L I+WEP+P E QN Y
Sbjct: 681 ARNAVGLGEPSPASAKTRTEDAIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGFGY 740
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R + + + V R + ++ ++VKV A N+ G GP S + +
Sbjct: 741 IIAFRPVGTVTWTRAVIST--SAARYVFRNDTIPPFSPFDVKVGAYNNRGEGPFSSIAVV 798
Query: 483 W 483
+
Sbjct: 799 Y 799
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 130/295 (44%), Gaps = 35/295 (11%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+QA T TCEA G P Y W NG L++ L + R + L I L+ ++D
Sbjct: 46 DHQA--TITCEAEGSPPPQYRWSLNGTLID-----LGNDYRRHMSGGSLIISNLDKDQDT 98
Query: 62 AMYQCRAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-AP 117
+YQC A N + +R +S Q L +FK + + S EG V + C P +
Sbjct: 99 GVYQCTAFNMWGSILSRRASLQFAYLD---NFKTQSVRSAVNVREGQGVVLLCGPPPHSG 155
Query: 118 KPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKG 172
+ F W + + + RR I E G+L I+ V R D G Y+C N ++ S
Sbjct: 156 ELTFAWIFNEYPHFVQQDSRRFISQETGSLYIAKVERSDVGNYTCVVNNTVTREKILSSP 215
Query: 173 RLIVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+VL + PKI + A ++L C A + ++++ T +GV
Sbjct: 216 TPLVLRSDGVMGEYEPKIEVHFPDSVPAAKESAVKLECFALGNPVPEISWRRT-SGVPFP 274
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +++ N N +LEI N DAG YEC+ ++ GK + + + P
Sbjct: 275 S----KVKMKNSN---AVLEIPNFQQEDAGTYECMAENRRGKNAARGRISFHAKP 322
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 191/509 (37%), Gaps = 81/509 (15%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++T C+ P W + E+L + + D L I + +RD A Y
Sbjct: 429 SEVTLECKPQASPPAISLWKKGNEILQ------RTERIALLPDGTLKIANVT-KRDAASY 481
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFV 122
C AKNQ T ++ +L ++T RP E GE ++ + C + P F
Sbjct: 482 TCIAKNQFGTASTTGRL-IVTEPTRITMRPTNMEIIVGE--SIVLPCQIASDPALDVSFS 538
Query: 123 WKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLI 175
W +G +I FE +G+L+I + + G Y C T+V + S ++
Sbjct: 539 WAFNGQLIDFQRDSDHFERVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSTSA--IL 596
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VAYIWT---HNGVRIG------ 224
V+ GP P K+++ EE+ D WT NG I
Sbjct: 597 VVKGP---PGPPDKVSV--------------EEITDSTAQLSWTPGRDNGSPITGYIVQA 639
Query: 225 ----NMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-----KISTKTTV 273
+ ++T ++G +L T EYE V ++ VG S KT
Sbjct: 640 RTPFTVGWQAVDTVPEVVNGNMLTATVVGLNAWVEYEFRVVARNAVGLGEPSPASAKTRT 699
Query: 274 IVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEH 330
P P V K+ I W + NG Y I R TW +
Sbjct: 700 EDAIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGF-GYIIAFRPVGTVTW---TRA 755
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
VI RY R + + P+S ++ KV A N G G SS + Y+ + P AP
Sbjct: 756 VISTSAARYVFRND-----TIPPFSPFDVKVGAYNNRGEGPFSSIAVVYSA-EEVPSVAP 809
Query: 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIA 448
R+ + +SWE LP + Y ++W K DT + Y V I
Sbjct: 810 KRVRARSVSAAQIEVSWEALPTIPERVLG-YEVMYWEDDTKPDTIGKVRLSGNYTLVNIT 868
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPES 477
++ + +Y + V A N GPGP+S
Sbjct: 869 GLKANTAYY-----LSVAAFNTAGPGPQS 892
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 108 TIFCNPEAAPKPKFVWKKDGNIIGSGGR-RKIFENGNLLISPVSRD-DSGIYSCTATNVH 165
TI C E +P P++ W +G +I G R+ G+L+IS + +D D+G+Y CTA N+
Sbjct: 50 TITCEAEGSPPPQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKDQDTGVYQCTAFNMW 109
Query: 166 G-MDESKGRLIVLHGPSYYEQ-LPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 221
G + + L + ++ Q + + + + + L C H+ EL + W N
Sbjct: 110 GSILSRRASLQFAYLDNFKTQSVRSAVNVREGQGVVLLCGPPPHSGEL---TFAWIFNEY 166
Query: 222 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG--KISTKTTVIVEGP 278
D I+ + G L I +D G Y CVV +TV KI + T +V
Sbjct: 167 PHFVQQDSRRF----ISQETGSLYIAKVERSDVGNYTCVVNNTVTREKILSSPTPLVLRS 222
Query: 279 PGLPGGVQ-VVEVH 291
G+ G + +EVH
Sbjct: 223 DGVMGEYEPKIEVH 236
>gi|449474236|ref|XP_002186936.2| PREDICTED: contactin-4 [Taeniopygia guttata]
Length = 1028
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 246/478 (51%), Gaps = 17/478 (3%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
++W C A G P +Y W ++GE PL+ Q R ++ LTI ++ D MYQC
Sbjct: 335 VSWECRASGRPKPSYRWLKDGE-------PLQPQGRLQLEQGSLTIPNVSLS-DAGMYQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ ++SA+L V+ + P F K L+ T GG V I C P+A+P+P + WKK
Sbjct: 387 VAENRHGVIFASAELSVIAIGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTYSWKKG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+I+ R + ++G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 447 KDILRENERITVLDDGSLRIINVTKSDAGSYTCVATNHFGTASSTGSLVV-KDPTRVMVS 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + + ++ L C + LD+ + W+ NG I D + E + G L+ I
Sbjct: 506 PFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFERVGGDSAGDLM-I 564
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
+ AG+Y C+V+++V K+S +IV GPPG P V + EV +++A + W GA N
Sbjct: 565 RSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIEEVTESTAQLSWRPGADN 624
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
PIT Y + ART ++ W VS + + +D GR + L PW YEF+V+A N
Sbjct: 625 HSPITMYVVQARTPFSVGWQAVS--TVPEVID---GRTFTATVVGLNPWVEYEFRVVAAN 679
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
+G GEPSSPS + T P P+ + GGGG +L I+WE +P E QN Y +
Sbjct: 680 LIGIGEPSSPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVA 739
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R + +T+ + V R S ++ YEVKV N+ G G S V ++
Sbjct: 740 FRPLGTVSWM-QTVVASPDAARYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVVY 796
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 21/270 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T SW R + + LP + R +L I E D +Y+C A+N
Sbjct: 249 CFALGNPVPTISWRR----ADGKQLP--RKARRHRSSGLLEIPNFQQE-DAGLYECVAEN 301
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ QL +PS+ ++ S+ +A V+ C PKP + W KDG +
Sbjct: 302 VRGKNVARGQL-TFYAQPSWTQQI--SDVHAAIEERVSWECRASGRPKPSYRWLKDGEPL 358
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYYEQLPPK 189
GR ++ E G+L I VS D+G+Y C A N HG+ + L V+ GP + + L K
Sbjct: 359 QPQGRLQL-EQGSLTIPNVSLSDAGMYQCVAENRHGVIFASAELSVIAIGPDFSKTLLKK 417
Query: 190 IT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+T + + + C Y W + G L E E + +D G L I N
Sbjct: 418 LTLVKVGGEVIIECKPKASP--RPTYSW-----KKGKDILRENERITV-LDDGSLRIINV 469
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ +DAG Y CV + G S+ +++V+ P
Sbjct: 470 TKSDAGSYTCVATNHFGTASSTGSLVVKDP 499
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 126/321 (39%), Gaps = 36/321 (11%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P T W LN ++ + RY + + L I N +D MYQC A
Sbjct: 49 SCEVKGNPRPTIGW-----KLNGSSIDVGMDYRYSLLEGDLLINNPNKSQDAGMYQCVAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKK 125
N T S AQL+ L+ +FK R S +G + + C P +++ +
Sbjct: 104 NPFGTIVSREAQLQFAYLE-NFKTR-TRSTVSVRQGQGMVLLCGPPPHSGELTYAWIFNE 161
Query: 126 DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHG--- 179
+ + RR + E GNL I+ V D G Y+C TN + G +VL
Sbjct: 162 YPSFVHQDSRRFVSQETGNLYIAKVETSDVGNYTCVVTNTVTNSKVLGPPTPLVLRNDGV 221
Query: 180 -----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ET 233
P Q P + A ++L C A + +++ D +L
Sbjct: 222 MGEYEPKIEVQFPETVPSAKGTTVKLECFALGNPVPTISW---------RRADGKQLPRK 272
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 293
+ GLLEI N DAG YECV ++ GK + + P Q+ +VH
Sbjct: 273 ARRHRSSGLLEIPNFQQEDAGLYECVAENVRGKNVARGQLTFYAQPSWTQ--QISDVHAA 330
Query: 294 -SATIQWTDGATNGRPITHYK 313
+ W A+ GRP Y+
Sbjct: 331 IEERVSWECRAS-GRPKPSYR 350
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
+ +G V + C P P W++ DG + RR +G L I ++D+G+Y C
Sbjct: 239 SAKGTTVKLECFALGNPVPTISWRRADGKQLPRKARRH-RSSGLLEIPNFQQEDAGLYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A NV G + ++G+L PS+ +Q+ + A + C A +Y W +
Sbjct: 298 VAENVRGKNVARGQLTFYAQPSWTQQI-SDVHAAIEERVSWECRASGRP--KPSYRWLKD 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + +LE G L I N S +DAG Y+CV ++ G I S + +VI G
Sbjct: 355 GEPLQPQGRLQLEQ-------GSLTIPNVSLSDAGMYQCVAENRHGVIFASAELSVIAIG 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 181/494 (36%), Gaps = 50/494 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P TYSW + ++L + +R + D+ ++R +N + D Y C A
Sbjct: 431 CKPKASPRPTYSWKKGKDIL-------RENERITVLDDG-SLRIINVTKSDAGSYTCVAT 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + + F W +G++
Sbjct: 483 NHFGTASSTGSL-VVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHL 541
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 542 IDFEKDGDHFERVGGDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 601
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + + + L R A + + + +G ++ + P + IDG
Sbjct: 602 EAVTIEEVTESTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTV--PEV-IDGRTF 658
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G S K P P V K+
Sbjct: 659 TATVVGLNPWVEYEFRVVAANLIGIGEPSSPSEKRRTEEALPEVTPANVSGGGGSKSELV 718
Query: 297 IQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
I W +G G + ++ + +W T V + RY R E+
Sbjct: 719 ITWETVPEELQNGGGFGY-VVAFRPLGTVSWMQT------VVASPDAARYVFRNES---- 767
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+S YE KV N G G SP + ++P +AP+ + D+ +SW P
Sbjct: 768 -LPPFSPYEVKVGVYNNKGEGS-FSPVTVVYSAEEEPTRAPTTVLARSISASDVEVSWAP 825
Query: 410 LPREKQNAPNIY-YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
P E Q+ I Y++ + ++ E ++ ++ GN ++ + Y + V+A
Sbjct: 826 -PWENQHKGRIQGYEVRCWRHDEKEENAKRIRTVGNQ--TSTKVSNLRGNALYHLAVRAY 882
Query: 469 NDVGPGPESEVVTI 482
N G GP S V +
Sbjct: 883 NTAGTGPSSAAVNV 896
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 19/183 (10%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 160
E V + C + P+P WK +G+ I G R + E L+ +P D+G+Y C
Sbjct: 42 EEKKVKLSCEVKGNPRPTIGWKLNGSSIDVGMDYRYSLLEGDLLINNPNKSQDAGMYQCV 101
Query: 161 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 217
ATN G S+ +L + ++ + +++ + + L C H+ EL Y W
Sbjct: 102 ATNPFGTIVSREAQLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPPHSGEL---TYAWI 158
Query: 218 HNGV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276
N + D ++ + G L I +D G Y CVV +TV T V
Sbjct: 159 FNEYPSFVHQDSRRF----VSQETGNLYIAKVETSDVGNYTCVVTNTV------TNSKVL 208
Query: 277 GPP 279
GPP
Sbjct: 209 GPP 211
>gi|426249258|ref|XP_004018367.1| PREDICTED: contactin-4 [Ovis aries]
Length = 1026
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIHIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +++ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTKV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + L++ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N P+T Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPVTMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I + RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + +KG+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVAKGQLTFYAQPNWSQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 406
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 124/318 (38%), Gaps = 32/318 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D MYQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S +G + + C P A + + + W +
Sbjct: 104 NLFGTIVSREAKLQFAYLE-NFKPR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--------- 177
RR + E GNL I+ V + D G Y+C TN + G L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMG 221
Query: 178 -HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ P Q P + A ++L C A + + IW +G I
Sbjct: 222 EYEPKIEVQFPEMVPTAKGTTVKLECFALGNPVPTI--IWRRADGKPIATKARR------ 273
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
+ G+LEI N DAG YECV +++ GK K + P + + V
Sbjct: 274 -HKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWSQKINDIHV-AIEE 331
Query: 296 TIQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 332 NVFW-ECKANGRPKPTYR 348
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 88/212 (41%), Gaps = 44/212 (20%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHR 196
L+ +P D+G+Y C ATN+ G S+ + +Y E P+ +++ +
Sbjct: 82 GSLLINNPNKTQDAGMYQCIATNLFGTIVSREAKLQF---AYLENFKPRTRSTVSVRQGQ 138
Query: 197 NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITN 247
+ L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 139 GMVLLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAK 183
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 184 VEKSDVGNYTCVVTNTV------TNQKVLGPP 209
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 172/490 (35%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ ++R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDVL-------KENERITISEDG-SLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G +
Sbjct: 481 NHFGTASSTGNL-VVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPVTMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PM 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNSAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPSSATVNV 894
>gi|348575437|ref|XP_003473495.1| PREDICTED: LOW QUALITY PROTEIN: contactin-4-like [Cavia porcellus]
Length = 1026
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 235/476 (49%), Gaps = 16/476 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NGE PL +DR I+ L I +N D MYQC A
Sbjct: 335 WECKANGKPKPTYRWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+PKP + WKK +
Sbjct: 387 ENKHGVIFSSAELSVIGECPDFSRTXLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRD 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+ P
Sbjct: 447 ILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + W+ N I N D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWSFNEHLIDFNKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 741 PYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVY 795
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIAWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A + C A+ + Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEEKVFWECKANGKP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E P
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIGECP 406
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 106/269 (39%), Gaps = 28/269 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSLVEGSLLINNPNKTQDTGTYQCIASN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+ P P + A ++L C A + +A+ +G I +
Sbjct: 223 YEPKIEVHFPETVPTAKGATVKLECFALGNPVPTIAW-RRADGKPIARKARR-------H 274
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGK 266
G+LEI N DAG YECV +++ GK
Sbjct: 275 KSNGILEIPNFQQEDAGLYECVAENSRGK 303
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
+ +P+ PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIQEPNHVMFPLDSE-----DKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSLVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C A+N G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDTGTYQCIASNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 171/491 (34%), Gaps = 44/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W + ++
Sbjct: 481 NHFGTASSTGNL-VVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNEHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFNKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW-EPLP 411
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W PL
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPLG 827
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ + K +WR ND E + ++ GN +I + Y + V+A N
Sbjct: 828 KNRGRIQGYEVK-YWRH-NDKEENARKIRTVGNQ--TSTKITNLQGSALYHLAVKAYNSA 883
Query: 472 GPGPESEVVTI 482
G GP S V +
Sbjct: 884 GTGPSSATVNV 894
>gi|118097058|ref|XP_414435.2| PREDICTED: contactin-4 [Gallus gallus]
Length = 1029
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 243/481 (50%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C A G P +Y W ++GE PL Q R I+ LTIR ++ D M
Sbjct: 332 EENVFWECHASGRPKPSYRWLKDGE-------PLLPQGRVQIEQGSLTIRNVSLS-DAGM 383
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ T ++SA+L V+ + P F K L+ T GG V I C P+A+P+P + W
Sbjct: 384 YQCVAENRHGTIFASAELSVIAVGPDFSKTLLKKLTLVKVGGEVIIECKPKASPRPTYSW 443
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R + ++G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 444 KKGKDILRENERITVLDDGSLRIVNVTKSDTGSYTCVATNHFGTASSTGSLVV-KDPTRV 502
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I D + E G
Sbjct: 503 MVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLIDFEKDGDHFERVGGQDSAGD 562
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 563 LMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEDVTIDEITDTTAQLSWRPG 622
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
A N PIT Y + ART ++ W VS + + +D G+ + L PW YEF+V+
Sbjct: 623 ADNHSPITMYVVQARTPFSVGWQAVS--TVPEVID---GKTFTATVVGLNPWVEYEFRVV 677
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 678 AANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGY 737
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + +T+ + V R S ++ YEVKV N+ G G S V +
Sbjct: 738 VVAFRPFGTISWM-QTVVASPDASRYVFRNESLPPFSPYEVKVGVYNNKGEGSFSPVTVV 796
Query: 483 W 483
+
Sbjct: 797 Y 797
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 21/270 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T SW R + + +P + R + +L I E D +Y+C A+N
Sbjct: 249 CFALGNPVPTISWRR----ADGKQIP--RKARRHRSNGLLEIPNFQQE-DAGLYECVAEN 301
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ QL +P++ ++ S+ +A NV C+ PKP + W KDG +
Sbjct: 302 VRGKNVARGQL-TFYAQPNWIQKI--SDVHAAIEENVFWECHASGRPKPSYRWLKDGEPL 358
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYYEQLPPK 189
GR +I E G+L I VS D+G+Y C A N HG + L V+ GP + + L K
Sbjct: 359 LPQGRVQI-EQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSVIAVGPDFSKTLLKK 417
Query: 190 IT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+T + + + C Y W + G L E E + +D G L I N
Sbjct: 418 LTLVKVGGEVIIECKPKASP--RPTYSW-----KKGKDILRENERITV-LDDGSLRIVNV 469
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ +D G Y CV + G S+ +++V+ P
Sbjct: 470 TKSDTGSYTCVATNHFGTASSTGSLVVKDP 499
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
+ +G V + C P P W++ DG I RR NG L I ++D+G+Y C
Sbjct: 239 SAKGTAVKLECFALGNPVPTISWRRADGKQIPRKARRH-RSNGLLEIPNFQQEDAGLYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A NV G + ++G+L P++ +++ + A N+ C H +Y W +
Sbjct: 298 VAENVRGKNVARGQLTFYAQPNWIQKI-SDVHAAIEENVFWEC--HASGRPKPSYRWLKD 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L + I+ G L I N S +DAG Y+CV ++ G I S + +VI G
Sbjct: 355 GEPL-------LPQGRVQIEQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSVIAVG 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 178/491 (36%), Gaps = 43/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P TYSW + ++L + +R + D+ ++R +N + D Y C A
Sbjct: 431 CKPKASPRPTYSWKKGKDIL-------RENERITVLDDG-SLRIVNVTKSDTGSYTCVAT 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + + F W +G++
Sbjct: 483 NHFGTASSTGSL-VVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHL 541
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 542 IDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGP 601
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R A + + + +G ++ + P + IDG
Sbjct: 602 PEDVTIDEITDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTV--PEV-IDGKT 658
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S P P V K+
Sbjct: 659 FTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSEL 718
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NG Y + R +W V + RY R E+ L
Sbjct: 719 VITWETVPEELQNGGGF-GYVVAFRPFGTISWMQTV--VASPDASRYVFRNES-----LP 770
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S YE KV N G G SP + ++P +AP + D+ ISW P PR
Sbjct: 771 PFSPYEVKVGVYNNKGEGS-FSPVTVVYSAEEEPTRAPITVLARSLSATDIEISWAP-PR 828
Query: 413 EKQNAPNIY-YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
E Q+ I Y++ + ++ E + ++ GN A ++ + Y + V+A N
Sbjct: 829 ENQHKGRIQGYEVRCWRHDEKEENARKIRTVGNQTSA--KVTNLQGNALYHLAVKAYNTA 886
Query: 472 GPGPESEVVTI 482
G GP S +V +
Sbjct: 887 GTGPSSAMVNV 897
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 32/207 (15%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NI-IGSGGRRKIFE 140
V +PS PL+SE V + C + P+P WK +G NI IG R + E
Sbjct: 27 VFLQEPSSVIFPLDSEE-----KKVKLNCEVKGNPRPTIGWKLNGTNIDIGMDYRYSMVE 81
Query: 141 NGNLLIS-PVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNLLI+ P D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 82 -GNLLINNPNRTQDTGTYQCVATNPFGRIISREAKLQFAYLENFKTRVRSTVSVRQGQGM 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNG----VRIGNMDLNELETPNINIDGGLLEITNASFAD 252
L C H+ EL Y W N V N ET N L I +D
Sbjct: 141 VLLCGPPPHSGEL---TYAWIFNEYPSFVHQDNRRFVSQETGN-------LYIAKVEASD 190
Query: 253 AGEYECVVKSTVGKISTKTTVIVEGPP 279
G Y CVV +TV T V GPP
Sbjct: 191 VGNYTCVVTNTV------TNSRVLGPP 211
>gi|16758746|ref|NP_446331.1| contactin-4 precursor [Rattus norvegicus]
gi|55976164|sp|Q62845.1|CNTN4_RAT RecName: Full=Contactin-4; AltName: Full=Brain-derived
immunoglobulin superfamily protein 2; Short=BIG-2;
Flags: Precursor
gi|1016012|gb|AAC52262.1| neural cell adhesion protein BIG-2 precursor [Rattus norvegicus]
gi|149036848|gb|EDL91466.1| contactin 4, isoform CRA_a [Rattus norvegicus]
Length = 1026
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 235/476 (49%), Gaps = 16/476 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL ++R I+ L I +N D MYQC A
Sbjct: 335 WECKANGRPKPTYRWLKNGD-------PLLTRERIQIEQGTLNITIVNLS-DAGMYQCVA 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ Y+SA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 387 ENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +V+ P+ P
Sbjct: 447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W VS + + VD G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGWQAVS--TVPELVD---GKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 741 PHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVY 795
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 129/319 (40%), Gaps = 34/319 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDSGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYE 184
+ RR + E GNL I+ V + D G Y+C TN + G ++L
Sbjct: 162 HPSYQDNRRFVSQETGNLYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMG 221
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I +
Sbjct: 222 EYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTI--LWRRADGKPIARKARRHKSS-- 277
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTS 294
G+LEI N DAG YECV +++ GK K V P VQ++ ++H
Sbjct: 278 -----GILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNW---VQIINDIHVAM 329
Query: 295 ATIQWTDGATNGRPITHYK 313
+ + NGRP Y+
Sbjct: 330 EESVFWECKANGRPKPTYR 348
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 VFVQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P DSG Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
L C H+ E L A+I+ + N ET N L I AD G Y
Sbjct: 142 LLCGPPPHSGE-LSYAWIFNEHPSYQDNRRFVSQETGN-------LYIAKVEKADVGNYT 193
Query: 258 CVVKSTVGKISTKTTVIVEGPP 279
CVV +TV T+ V GPP
Sbjct: 194 CVVTNTV------TSHQVLGPP 209
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 172/491 (35%), Gaps = 44/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + E+L + +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPRPVYTWRKGREIL-------RENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N T S+ V+ P+ P S + GE + + + F W +G+
Sbjct: 481 NHFGTASSTGN--VVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGH 538
Query: 129 IIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+I FE G+L+I + +G Y C + LIV P
Sbjct: 539 LIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPG 598
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L R + + I +G ++ + P + +DG
Sbjct: 599 PPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-VDGK 655
Query: 242 LLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
T EYE V + +G + S K P P V K+
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 295 ATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
I W + NGR Y + R + W + + RY R E+ +
Sbjct: 716 LVITWETVPEELQNGRGF-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----V 767
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W
Sbjct: 768 RPFSPFEVKVGVFNNKGEG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPI 826
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ + Y +WR +D E + ++ GN +I + Y + V+A N
Sbjct: 827 GKNRGRIQGYEVKYWRH-DDKEENARKIRTVGNQ--TSTKITNLKGNALYHLSVKAYNSA 883
Query: 472 GPGPESEVVTI 482
G GP S V +
Sbjct: 884 GTGPSSAAVNV 894
>gi|359078219|ref|XP_002697014.2| PREDICTED: contactin-4 [Bos taurus]
Length = 1026
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 239/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIHIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP W
Sbjct: 382 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +++ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTKV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + L++ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I + RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + +KG+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVAKGQLTFYAQPNWSQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 406
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 124/318 (38%), Gaps = 32/318 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D MYQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S +G + + C P A + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKPR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--------- 177
RR + E GNL I+ V + D G Y+C TN + G L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMG 221
Query: 178 -HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ P Q P + A ++L C A + + IW +G I
Sbjct: 222 EYEPKIEVQFPETVPTAKGTTVKLECFALGNPVPTI--IWRRADGKPIATKARR------ 273
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
+ G+LEI N DAG YECV +++ GK K + P + + V
Sbjct: 274 -HKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWSQKINDIHV-AIEE 331
Query: 296 TIQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 332 NVFW-ECKANGRPKPTYR 348
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 44/212 (20%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHR 196
L+ +P D+G+Y C ATN G S+ + +Y E P+ +++ +
Sbjct: 82 GSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQF---AYLENFKPRTRSTVSVRQGQ 138
Query: 197 NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITN 247
+ L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 139 GMVLLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAK 183
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 184 VEKSDVGNYTCVVTNTV------TNQKVLGPP 209
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 172/490 (35%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P ++W + ++L ++ +R I ++ ++R +N + D Y C A
Sbjct: 429 CKPKASPKPVHTWKKGRDVL-------KENERITISEDG-SLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G +
Sbjct: 481 NHFGTASSTGNL-VVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PM 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNSAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPASATVNV 894
>gi|354473112|ref|XP_003498780.1| PREDICTED: contactin-4 [Cricetulus griseus]
Length = 1017
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 235/476 (49%), Gaps = 16/476 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 326 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 377
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 378 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVIIECKPKASPRPVYTWRKGRE 437
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +IV P+ P
Sbjct: 438 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTKVMVPPS 496
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + W+ NG I + D + E G L I N
Sbjct: 497 SMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 556
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K++ +IV GPPG P V + E+ T+A + W G N
Sbjct: 557 IQLKHAGKYVCMVQTSVDKLTAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 616
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W VS + + VD G+ + L PW YEF+ +A N +
Sbjct: 617 PITMYVIQARTPFSVGWQAVS--TVPELVD---GKTFTATVVGLNPWVEYEFRTVAANVI 671
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 672 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 731
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 732 PHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVY 786
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR +G L I ++D+G Y C
Sbjct: 228 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SDGILEIPNFQQEDAGSYEC 286
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+LI P++ +++ I +A ++ C A+ Y W N
Sbjct: 287 VAENSRGKNIAKGQLIFYAQPNWVQKI-NDIHVAMEESVFWECKANGRP--KPTYRWLKN 343
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 344 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 396
Query: 278 P 278
P
Sbjct: 397 P 397
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 127/318 (39%), Gaps = 32/318 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D YQC A
Sbjct: 40 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGTYQCIAT 94
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 95 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 152
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYE 184
RR + E GNL I+ V + D G Y+C TN + G ++L
Sbjct: 153 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMG 212
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I
Sbjct: 213 EYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR------ 264
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
+ G+LEI N DAG YECV +++ GK K +I P + + V
Sbjct: 265 -HKSDGILEIPNFQQEDAGSYECVAENSRGKNIAKGQLIFYAQPNWVQKINDIHV-AMEE 322
Query: 296 TIQWTDGATNGRPITHYK 313
++ W + NGRP Y+
Sbjct: 323 SVFW-ECKANGRPKPTYR 339
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 18 VFVQEPSHIMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 72
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 73 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 132
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 133 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 177
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 178 SDVGNYTCVVTNTV------TNHKVLGPP 200
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 172/491 (35%), Gaps = 44/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + E+L + +R I ++ +R +N + D Y C A
Sbjct: 420 CKPKASPRPVYTWRKGREIL-------RENERITISEDG-NLRIINVTKSDAGSYTCIAT 471
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N T S+ V+ P+ P S + GE + + + F W +G+
Sbjct: 472 NHFGTASSTGN--VIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGH 529
Query: 129 IIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+I FE G+L+I + +G Y C + LIV P
Sbjct: 530 LIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLTAAADLIVRGPPG 589
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L R + + I +G ++ + P + +DG
Sbjct: 590 PPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-VDGK 646
Query: 242 LLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
T EYE V + +G + S K P P V K+
Sbjct: 647 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 706
Query: 295 ATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
I W + NGR Y + R + W + + RY R E+ +
Sbjct: 707 LVITWETVPEELQNGRGF-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----V 758
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W
Sbjct: 759 RPFSPFEVKVGVFNNKGEG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPI 817
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ + Y +WR +D E + ++ GN +I + Y + V+A N
Sbjct: 818 GKNRGRIQGYEVKYWRH-DDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSA 874
Query: 472 GPGPESEVVTI 482
G GP S V +
Sbjct: 875 GTGPSSATVNV 885
>gi|348510469|ref|XP_003442768.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
Length = 1012
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/494 (32%), Positives = 244/494 (49%), Gaps = 37/494 (7%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
M A+L W C+A G P TY W +NG+ L +E +R ++ LTI ++ D
Sbjct: 330 MAIDANLQWECKAIGKPRPTYRWLKNGQSLKAE-------ERIHLEAGRLTIPKISLS-D 381
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ + Y+SA+L+V+ P F +RP++ T GG V + C P A+P+
Sbjct: 382 SGMYQCVAENEHGSVYASAELKVVASPPDFTRRPVKKSTVIQRGGEVVLECRPHASPRAT 441
Query: 121 FVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W ++G + + RR I E+G L I+ +S+ D G Y+C A N G S G L+V
Sbjct: 442 ISWWREGGMHLKDSERRTIMEDGTLRITNISKSDGGRYTCVARNRFGTSSSTGSLVVKE- 500
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
P+ P + + +++ L C ++ L + W NG I D N E + I
Sbjct: 501 PTKIIVPPLSLDASVGQSIVLPCEVSSDSSLSPIFKWFFNGKAI---DFNRQEHFEM-IG 556
Query: 240 GGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
GG L + N +G+Y C+V + V +S +IV GPPG P G+ V ++ T+
Sbjct: 557 GGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPPGPPEGLVVTDITDTTVQ 616
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N P+T Y + ART ++ W + D G+ + L PW
Sbjct: 617 LSWGSGPDNHSPVTKYMVQARTPFSIGW-----QTVRTVPDSVPGQMMHATVKELNPWVD 671
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G GEPS+PS Q T A P AP + GGGG G+L I WEP+P E+Q+
Sbjct: 672 YEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPINVSGGGGARGELVIMWEPVPEEQQS 731
Query: 417 APNIYYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ Y + +R + + L Y N IA + + +EV V N
Sbjct: 732 GEDFGYVVAFRPLGSSTWIQTVLASPDASRYIYRNDSIAPLSL--------FEVTVGVYN 783
Query: 470 DVGPGPESEVVTIW 483
++G GP S VV ++
Sbjct: 784 NMGEGPFSRVVRVF 797
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 126/320 (39%), Gaps = 34/320 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P Y W +G +N+++ P Y + + L I + +YQC A N
Sbjct: 49 CKAKGNPPPRYRWKVDGRDINTDSDP-----NYSLVEGNLLISNPHVINHGGVYQCIATN 103
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG-- 127
T S +F + + EG V + C P + K+ W +G
Sbjct: 104 TFGTVVSREAKVQFAFLQNFSSK-TRNTVSVREGQAVVLLCGPPPHYGEIKYSWVFNGQR 162
Query: 128 NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESK----------GRLIV 176
N + RR I + GNL I+ V D+G Y+C N+ M S R +V
Sbjct: 163 NFLQQDARRFISQKTGNLYIAKVEASDAGNYTCAVRNM--MTNSTVFSSPTPVVVRRDVV 220
Query: 177 L--HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
+ + P Q P + ++ +++L C A + +++ G + +N
Sbjct: 221 MGEYEPKIEVQFPDTLHVSKGSSVKLECFALGNPVPSISWRRADGNPLPGKIKINH---- 276
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT- 293
G+LEI DAG YECV +++ G+ + +I L + + H
Sbjct: 277 ----SSGVLEIPYFRPEDAGMYECVAENSRGRNVARGQLIFHSAEHLQWVQTLKDAHMAI 332
Query: 294 SATIQWTDGATNGRPITHYK 313
A +QW A G+P Y+
Sbjct: 333 DANLQWECKAI-GKPRPTYR 351
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 188/496 (37%), Gaps = 54/496 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAM 63
++ C P T SW+R G + L+D +R I +D L I ++ + D
Sbjct: 426 GEVVLECRPHASPRATISWWREG------GMHLKDSERRTIMEDGTLRITNIS-KSDGGR 478
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y C A+N+ T S+ L V+ PL + G+ + + +++ P F W
Sbjct: 479 YTCVARNRFGTSSSTGSL-VVKEPTKIIVPPLSLDASVGQSIVLPCEVSSDSSLSPIFKW 537
Query: 124 KKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+G I R++ FE G+L++ + SG Y C + LIV
Sbjct: 538 FFNGKAI-DFNRQEHFEMIGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVR 596
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPN 235
P E L +T +QL + + V + IG + T
Sbjct: 597 GPPGPPEGL--VVTDITDTTVQLSWGSGPDNHSPVTKYMVQARTPFSIG---WQTVRTVP 651
Query: 236 INIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGG 284
++ G ++ T +YE V ++VG +I TK V P + GG
Sbjct: 652 DSVPGQMMHATVKELNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPINVSGG 711
Query: 285 VQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ I W + +G Y + R +STW + + + RY
Sbjct: 712 GGA----RGELVIMWEPVPEEQQSGEDFG-YVVAFRPLGSSTW--IQTVLASPDASRYIY 764
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
R ++ + P S +E V N +G G P S + + ++P +APSR
Sbjct: 765 RNDS-----IAPLSLFEVTVGVYNNMGEG-PFSRVVRVFSAEEEPSEAPSRAWARAVSAS 818
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++ + WEP+P + + Y++ + + + +++ ++ + + T Y
Sbjct: 819 EIEVFWEPVPPRSNSEKIVAYEVLFWEGGLEQSEADRVRVINCTAL----LSGLKGSTRY 874
Query: 462 EVKVQAINDVGPGPES 477
+ V+A N G GP S
Sbjct: 875 LISVRAQNSAGLGPCS 890
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
++ +C A+N TR+ V T +PS P+ ++ V I C + P P++
Sbjct: 12 SLKECLAEN---TRHGP----VFTQEPSDSIFPMSTDDK-----QVFINCKAKGNPPPRY 59
Query: 122 VWKKDGNIIGSGGRRKI-FENGNLLIS-PVSRDDSGIYSCTATNVHGM---DESKGRLIV 176
WK DG I + GNLLIS P + G+Y C ATN G E+K +
Sbjct: 60 RWKVDGRDINTDSDPNYSLVEGNLLISNPHVINHGGVYQCIATNTFGTVVSREAKVQFAF 119
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
L ++ + +++ + + L C ++ Y W NG R N L + I
Sbjct: 120 LQ--NFSSKTRNTVSVREGQAVVLLCGP-PPHYGEIKYSWVFNGQR--NF-LQQDARRFI 173
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGK---ISTKTTVIV 275
+ G L I +DAG Y C V++ + S+ T V+V
Sbjct: 174 SQKTGNLYIAKVEASDAGNYTCAVRNMMTNSTVFSSPTPVVV 215
>gi|194378322|dbj|BAG57911.1| unnamed protein product [Homo sapiens]
Length = 956
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 262 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 313
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 314 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR 373
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 374 GTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 432
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 433 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 489
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 490 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 549
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 550 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 604
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 605 AGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGY 664
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV ND G G S V +
Sbjct: 665 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNDEGEGSLSTVTIV 723
Query: 483 W 483
+
Sbjct: 724 Y 724
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 187/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 353 GDIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 405
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 406 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 457
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 458 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 517
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 518 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 577
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 578 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVN 634
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 635 IHGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 687
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N+ G G S+ + Y+ D+P AP
Sbjct: 688 RFVYRNES-----IIPLSPFEVKVGVYNDEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 741
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 742 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 799
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 800 NTIYFASVRAYNTAGTGPSSPPVNV 824
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 80 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 133
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 134 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 192
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 193 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 249
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 250 QKIQNTHLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 300
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 301 ITMLNVSDSGVYQCAAEN 318
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 94/256 (36%), Gaps = 31/256 (12%)
Query: 42 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 101
Y + L I + ++D MYQC A N L T S F+ + S
Sbjct: 4 HYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSV 62
Query: 102 GEGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDD 153
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 63 REGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSD 118
Query: 154 SGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCS 203
G Y+C TN +G L + P + P I A +++L C
Sbjct: 119 VGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECF 178
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A + D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 179 ALGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNL 230
Query: 264 VGKISTKTTVIVEGPP 279
G+ K +I PP
Sbjct: 231 RGRNLAKGQLIFYAPP 246
>gi|334335510|ref|XP_001373638.2| PREDICTED: contactin-3 [Monodelphis domestica]
Length = 1031
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 246/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NG+ L E +R I + L+I LN D MYQ
Sbjct: 336 NLYWECRASGKPKPSYRWLKNGDGLIVE-------ERVQIDNGALSIAVLN-VNDSGMYQ 387
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V C P+A+PK WKK
Sbjct: 388 CIAENKHGLIYSSAELKVVASAPDFSKNPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKK 447
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ S R I ++G L I+ V++ D G Y+C A N G S +L+V P+
Sbjct: 448 GDEILQSSERTAILKDGGLQIANVTKLDVGTYTCIAENQFGKASSSTKLVVTE-PTRITL 506
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG-VRIGNMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG + D + E + G L+
Sbjct: 507 APSNMDVSVGESVILPCQVQHDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGSSSGDLM- 565
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 566 IRNIQLKHSGKYVCMVQTEVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKEGTD 625
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N PIT Y I ART ++ W ++ D G+ + L PW YEF+V+A
Sbjct: 626 NHSPITSYVIQARTPFSVGW-----QIVTTVPDTIDGKTFTATVVDLNPWVEYEFRVVAN 680
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 681 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 740
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 741 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESILSFSPYEVKVGVYNNKGEGPFSPVTTVFS 799
Query: 484 --HDPLVIISYVCQGDL 498
+P V S+V L
Sbjct: 800 AEEEPTVAPSHVLANSL 816
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P+ W++ + S + NG L I ++D+G+Y C
Sbjct: 241 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKMRKSNGMLEIPNFQQEDTGLYECI 300
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++GRL P ++ Q+ I A NL C A + +Y W NG
Sbjct: 301 AENSRGKNIARGRLTYYAKP-HWVQMIKDIEAAVEDNLYWECRASGKP--KPSYRWLKNG 357
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ + + ID G L I + D+G Y+C+ ++ G I S + V+ P
Sbjct: 358 DGL-------IVEERVQIDNGALSIAVLNVNDSGMYQCIAENKHGLIYSSAELKVVASAP 410
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 109/278 (39%), Gaps = 30/278 (10%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T CEA G P Y W NG ++ L RY + L + + RD
Sbjct: 45 EKKITLNCEAKGNPSPHYRWQLNGSDID-----LSMDYRYKLIGGNLVVINPSRNRDIGT 99
Query: 64 YQCRAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKP 119
YQC A N L T S A+L+ L+ FK + + S EG V + C P
Sbjct: 100 YQCFATNSLGTVVSKEAKLQFAYLE-HFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSY 157
Query: 120 KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL- 177
+++ + + + RR + E G+L I+ V D G Y+C T+ + G L
Sbjct: 158 AWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNNRVLGSPTPLV 217
Query: 178 ---------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ P Q P + A ++L C A + + N R +
Sbjct: 218 LRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQI------NWRRSDGLPF 271
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ + G+LEI N D G YEC+ +++ GK
Sbjct: 272 S--SKIKMRKSNGMLEIPNFQQEDTGLYECIAENSRGK 307
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 173/496 (34%), Gaps = 50/496 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + C+ P SW + E+L S + ++D L I + + D Y C
Sbjct: 429 VIFDCKPKASPKAHCSWKKGDEILQS------SERTAILKDGGLQIANVT-KLDVGTYTC 481
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWK 124
A+NQ SS +L V+T P + GE +V + C + P F W
Sbjct: 482 IAENQFGKASSSTKL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIVFTWY 538
Query: 125 KDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+G I FE +G+L+I + SG Y C S LIV
Sbjct: 539 FNGAITDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTEVDSVSSAADLIVRG 598
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P E + L + + I +G + T I
Sbjct: 599 SPGPPESVKVDEITDTTAQLSWKEGTDNHSPITSYVIQARTPFSVG---WQIVTTVPDTI 655
Query: 239 DGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQV 287
DG T EYE V + +G K+ T+ V P + GG
Sbjct: 656 DGKTFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG- 714
Query: 288 VEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
++ I W + NG Y + R +TW + V + RY R E
Sbjct: 715 ---SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNE 768
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ ++ +S YE KV N G G P SP + ++P APS + +
Sbjct: 769 S-----ILSFSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIE 822
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
+SW+ +P + + + Y+I + E S +K GN A R+ Y
Sbjct: 823 VSWDAIPWKMSSGRLLGYEIRYWNNGGKEDSSNRVKVMGNETTA--RLQGLQSNLVYYTA 880
Query: 465 VQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 881 VRAYNSAGTGPFSATV 896
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRR 136
S Q V +PS P+ SE +T+ C + P P + W+ +G+ I S R
Sbjct: 24 SLQGPVFIREPSNNIFPVGSEE-----KKITLNCEAKGNPSPHYRWQLNGSDIDLSMDYR 78
Query: 137 KIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAA 194
GNL+ I+P D G Y C ATN G SK +L + + ++ +++
Sbjct: 79 YKLIGGNLVVINPSRNRDIGTYQCFATNSLGTVVSKEAKLQFAYLEHFKTKMRSTVSVRE 138
Query: 195 HRNLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 252
+ + L C H+ EL +Y W N + E ++ + G L I +D
Sbjct: 139 GQGVVLLCGPPPHSGEL---SYAWIFNEYP---SFVQEDSRRFVSQETGHLYIAKVEPSD 192
Query: 253 AGEYECVVKSTV 264
G Y CVV STV
Sbjct: 193 VGNYTCVVTSTV 204
>gi|296475000|tpg|DAA17115.1| TPA: contactin-4-like [Bos taurus]
Length = 1014
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 241/481 (50%), Gaps = 17/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 319 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIHIEQGTLNITIVNLS-DAGM 370
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP W
Sbjct: 371 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTW 430
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +++ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 431 KKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTKV 489
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGL 242
P + + ++ L C + L++ + W+ NG R+ + D + + D G
Sbjct: 490 MVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNG-RLIDFDRDGDHFERVGGDSAGD 548
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 549 LMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 608
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 609 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 663
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 664 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 723
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 724 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 782
Query: 483 W 483
+
Sbjct: 783 Y 783
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I + RR NG L I ++D+G+Y C
Sbjct: 227 AKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHK-SNGILEIPNFQQEDAGLYECV 285
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + +KG+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 286 AENSRGKNVAKGQLTFYAQPNWSQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 342
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 343 EPLLTRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 395
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 124/318 (38%), Gaps = 32/318 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D MYQC A
Sbjct: 38 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 92
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S +G + + C P A + + + W +
Sbjct: 93 NSFGTIVSREAKLQFAYLE-NFKPR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNE 150
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--------- 177
RR + E GNL I+ V + D G Y+C TN + G L
Sbjct: 151 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMG 210
Query: 178 -HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ P Q P + A ++L C A + + IW +G I
Sbjct: 211 EYEPKIEVQFPETVPTAKGTTVKLECFALGNPVPTI--IWRRADGKPIATKARR------ 262
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
+ G+LEI N DAG YECV +++ GK K + P + + V
Sbjct: 263 -HKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWSQKINDIHV-AIEE 320
Query: 296 TIQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 321 NVFW-ECKANGRPKPTYR 337
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 44/212 (20%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 16 IFIQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 70
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHR 196
L+ +P D+G+Y C ATN G S+ + +Y E P+ +++ +
Sbjct: 71 GSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQF---AYLENFKPRTRSTVSVRQGQ 127
Query: 197 NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITN 247
+ L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 128 GMVLLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAK 172
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 173 VEKSDVGNYTCVVTNTV------TNQKVLGPP 198
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 172/489 (35%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P ++W + ++L ++ +R I ++ ++R +N + D Y C A
Sbjct: 418 CKPKASPKPVHTWKKGRDVL-------KENERITISEDG-SLRIINVTKSDAGSYTCIAT 469
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G +
Sbjct: 470 NHFGTASSTGNL-VVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRL 528
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 529 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPP 588
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G +N + P + IDG
Sbjct: 589 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTF 645
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 646 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 705
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 706 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRP 757
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 758 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PME 815
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + +D E + ++ GN +I + Y + V+A N G
Sbjct: 816 KNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNSAGT 873
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 874 GPASATVNV 882
>gi|327269142|ref|XP_003219354.1| PREDICTED: contactin-5-like [Anolis carolinensis]
Length = 1098
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 159/483 (32%), Positives = 238/483 (49%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C+A G P TY W +NG +PL + R + + VL I +N + D
Sbjct: 399 LDSGDQLRWECKAIGKPRPTYRWLKNG-------VPLWPESRIEMVNGVLMIHSVN-QSD 450
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+LR+L P+F L+ +G V + C P+A+PKP
Sbjct: 451 AGMYQCVAENKHGAIYTSAELRILASAPTFPASHLKKTIIITKGQEVAVECKPQASPKPT 510
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R + +G+L I ++ D G Y C NV G E + V P
Sbjct: 511 ISWKKGDKALRENKRITVLPDGSLRILNATKSDEGKYVCRGENVFGSAEITASVFVKE-P 569
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ + P + + ++ L C A + LDV + WT NG I + E+ + +
Sbjct: 570 TRIDLSPKRTELTVGESIVLSCKALHDPSLDVIFHWTLNGQPIDFEKEGGHFESIRVQVS 629
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T IS + ++V GPPG PG V V E+ +T+AT+ W
Sbjct: 630 SADLMIRNILLMHAGRYGCRVQTTADSISDEAELLVRGPPGPPGVVIVEEITETTATLSW 689
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
T GA N PIT Y + AR+ ++ W + + +G E+++ L PW YEF
Sbjct: 690 TPGADNHSPITSYNLQARSPFSLGW-----QTVKTVPETISGDMESAMAVELNPWVEYEF 744
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 745 RVVATNKIGTGDPSAPSRVIRTKEAVPKTAPANVSGRSGRRHELVIAWEPVSEEFQNGEG 804
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S +
Sbjct: 805 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPI 863
Query: 480 VTI 482
V I
Sbjct: 864 VVI 866
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 108/279 (38%), Gaps = 29/279 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ ++ +C+A P TY W RNG + +E RY + + + I + +D
Sbjct: 112 SDEKKVSLSCQARANPTPTYKWLRNGTEIE-----IESDYRYSVIEGSIIINNPSETKDT 166
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
+YQC N + S +F R S EG V + C+P +P+
Sbjct: 167 GLYQCITTNMFGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPLHSPEII 225
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 226 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPL 285
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + +++ NG
Sbjct: 286 TLRTDGVMGEYEPKIEVHFPYTVTTAKGSTIKMECFALGNPVPTISWRKV-NGPNPSKAR 344
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
L + + +LEI N DAG YEC +++ G+
Sbjct: 345 LRKSQ--------AVLEIPNVQLEDAGTYECKAENSRGR 375
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 106/277 (38%), Gaps = 26/277 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTR 75
P++ YSW N + ED R+ Q+ L I + P D Y C KN +
Sbjct: 222 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQPS-DVGSYICLVKNTVTNA 276
Query: 76 YSSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ LTL+ E + +G + + C P P W+K
Sbjct: 277 RVLSPPTPLTLRTDGVMGEYEPKIEVHFPYTVTTAKGSTIKMECFALGNPVPTISWRKVN 336
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
S R + L I V +D+G Y C A N G + +G+L V P + E+L
Sbjct: 337 GPNPSKARLRK-SQAVLEIPNVQLEDAGTYECKAENSRGRNVFRGQLQVYTYPHWTERL- 394
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + L+ C A + Y W NGV + I + G+L I +
Sbjct: 395 NDTQLDSGDQLRWECKAIGKP--RPTYRWLKNGVPL-------WPESRIEMVNGVLMIHS 445
Query: 248 ASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPG 283
+ +DAG Y+CV ++ G I T + I+ P P
Sbjct: 446 VNQSDAGMYQCVAENKHGAIYTSAELRILASAPTFPA 482
>gi|6981246|ref|NP_037357.1| contactin-6 precursor [Rattus norvegicus]
gi|55976162|sp|P97528.1|CNTN6_RAT RecName: Full=Contactin-6; AltName: Full=Neural recognition
molecule NB-3; Flags: Precursor
gi|1752645|dbj|BAA13320.1| NB-3 [Rattus norvegicus]
Length = 1028
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ +Y+W +NGE LN+E +R ++ L I LN D +YQ
Sbjct: 334 SLFWECKASGNPNPSYTWLKNGERLNTE-------ERIQTENGTLIITMLNVS-DSGIYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRVL P F K P++ + GG+++I C P A PK WK+
Sbjct: 386 CAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R E+G+L I V+R D+G Y+C ATN G +S G LIV +
Sbjct: 446 GTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGQTYNATVIGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WEP+P E QN Y
Sbjct: 677 AGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVITWEPIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + + R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWMKEKVALVESSKF-IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVSIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 187/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + +F++D L I + D Y
Sbjct: 425 GDISIECKPNAFPKASISWKRGTENLK------QSKRVFFLEDGSLKICNVT-RSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ SS L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCVATNQFGNGKSSGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPTM 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 530 EVLFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V + +G + TK ++ P
Sbjct: 650 --PEI-LNGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW + E V E
Sbjct: 707 INGGGG----SRSELVITWEPIPEELQNGEGF-GYIIMFRPVGSTTW--MKEKVALVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++ R E+ ++P S +E KV N G G S+ S Y+ D+P AP
Sbjct: 760 KFIYRNES-----IMPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPRLAPRGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
D+ +SW + + + Y++ + N E ++ GNV I
Sbjct: 814 FSASDMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 108/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ +C A G P Y W +NG ++ Y + L I ++D
Sbjct: 42 SRSEIILSCTASGYPSPHYRWKQNGTDID-----FSMTYHYRLDGGSLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
+YQC A N + T S F+ + S EG V + C P P F
Sbjct: 97 IYQCLATNPVGTILSRKAKLQFAYIEDFETKS-RSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + +N GNL I+ V D G Y+C TN +G
Sbjct: 152 ELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPMPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ + + LEI D G YECV + G+ K +I PP
Sbjct: 272 KVKYSNSQ--------ATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLIFYAPP 318
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 28/256 (10%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
+++Y W N L +++ R F+ N L I + P D Y C N+ R
Sbjct: 152 ELSYDW-----TFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPS-DVGNYTCFVTNKEAHR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 265 DGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLI-FYAPPEWEQK 323
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ + +L C A + +Y W NG R+ + I + G L IT
Sbjct: 324 IQNTYLSIYDSLFWECKASGNP--NPSYTWLKNGERLNTEE-------RIQTENGTLIIT 374
Query: 247 NASFADAGEYECVVKS 262
+ +D+G Y+C ++
Sbjct: 375 MLNVSDSGIYQCAAEN 390
>gi|350591368|ref|XP_001927514.4| PREDICTED: contactin-4 [Sus scrofa]
Length = 807
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 239/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NG+ PL +DR I+ L I +N D M
Sbjct: 111 EENIFWECKANGRPKPTYRWLKNGD-------PLLSRDRIHIEQGTLNITIVNLS-DAGM 162
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + ++ T GG V I C P+A+PKP + W
Sbjct: 163 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLVKRVTLVKVGGEVVIECKPKASPKPVYTW 222
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +++ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 223 KKGRDVLRENERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 281
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + L + + W+ NG I + D + E G
Sbjct: 282 MVPPSSMDVTVGESIVLPCQVTHDHSLAIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGD 341
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G
Sbjct: 342 LMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 401
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 402 PDNHSPITMYVIQARTPFSVGWQAV--NTVPEIID---GKTFTATVVGLNPWVEYEFRTV 456
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 457 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 516
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 517 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVYNNKGEGPFSPTTVV 575
Query: 483 W 483
+
Sbjct: 576 Y 576
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG + RR NG L I ++D+G+Y C
Sbjct: 19 AKGTTVKLECFALGNPVPTIIWRRADGKPMARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENIFWECKANGRP--KPTYRWLKNG 134
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ + D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 135 DPLLSRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 187
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L + +R I ++ ++R +N + D Y C A
Sbjct: 210 CKPKASPKPVYTWKKGRDVL-------RENERITISED-GSLRIINVTKSDAGSYTCIAT 261
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 262 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLAIVFTWSFNGHL 320
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 321 IDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGP 380
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P I IDG
Sbjct: 381 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEI-IDGKT 437
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 438 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 497
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 498 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VR 549
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 550 PFSPFEVKVGVYNNKGEG-PFSPTTVVYSAEEEPSKPPASIFARSLSATDIEVFWAS-PM 607
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 608 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAG 665
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 666 TGPSSATVNV 675
>gi|426249261|ref|XP_004018368.1| PREDICTED: contactin-6 isoform 1 [Ovis aries]
Length = 1028
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 236/480 (49%), Gaps = 21/480 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G PD Y+W +NGE LN E +R I++ L I LN D +YQC
Sbjct: 335 LFWECKASGKPDPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGIYQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + Y++A+LRVL P F K PL+ + GG++ I C P A P+ WK+
Sbjct: 387 AAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISWKRG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + E+G+L I V+R D+G+Y+C ATN G+ ++ G LI+ +
Sbjct: 447 IESLRQSKRVFLLEDGSLKIYNVTRSDAGVYTCIATNQFGVAKNTGSLIIKER-TVITVP 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 243
P K+ + ++ L C + ++V ++W+ NG I D + I G G L
Sbjct: 506 PSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI---DFKKGVAHFERIGGDSVGDL 562
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C VK+T+ +S +IV GPPG P V+V + S + W G+
Sbjct: 563 MIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPGPPEDVRVTHISSASCQLSWRPGS 622
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI + I ART ++ W + + G+ + L PW YEF+V+A
Sbjct: 623 DNNSPIQIFSIQARTPFSVGW-----QAVSTVPEILNGKTFNATVVALNPWVEYEFRVVA 677
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
GN +G GEPS PS T A P AP+ I GGGG +L I+WE +P E QN + Y
Sbjct: 678 GNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSRSELIITWESIPEELQNGEDFGYI 737
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ R T + E + + + R + + +EVKV N G GP S I+
Sbjct: 738 VMLRPVGSTTWTKERVPSVESSRF-IYRNENIIPLSPFEVKVGVYNKEGEGPLSTASIIY 796
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 187/500 (37%), Gaps = 50/500 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P T SW R E L + + + ++D L I Y D +Y
Sbjct: 425 GDIVIECKPNAFPRATISWKRGIESLR------QSKRVFLLEDGSLKI-YNVTRSDAGVY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ ++ L ++ + P + + GE ++ + C P + FV
Sbjct: 478 TCIATNQFGVAKNTGSL-IIKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFV 534
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G++I FE G+L+I + + SG Y CT + G +IV
Sbjct: 535 WSFNGDVIDFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + +A L R + + + I +G ++ + P I
Sbjct: 595 RGPPGPPEDVRVTHISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI 652
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V +++G + TK +V P + GG
Sbjct: 653 -LNGKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGG 711
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG Y ++ R ++TW E V E R+ R
Sbjct: 712 G----SRSELIITWESIPEELQNGEDF-GYIVMLRPVGSTTW--TKERVPSVESSRFIYR 764
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E ++P S +E KV N+ G G S+ S Y+ D+P AP +
Sbjct: 765 NEN-----IIPLSPFEVKVGVYNKEGEGPLSTASIIYSG-EDEPQLAPRGTSVQSFSASE 818
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW + + + Y++ + + E ++ GN I I T Y
Sbjct: 819 MEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITGLKANTVYF 876
Query: 463 VKVQAINDVGPGPESEVVTI 482
V+A N G GP S V +
Sbjct: 877 ASVRAYNTAGTGPSSPPVNV 896
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W + N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----IFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCLITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 RVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG+ + G + L I ++D G Y C A+N+ G + +KG+LI + P +EQ
Sbjct: 265 DGSPL-PGKVKYSKSQATLEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWEQ 322
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + D Y W NG R LN E I I+ G L I
Sbjct: 323 KIQNTYLSIYDSLFWECKASGKP--DPWYTWLKNGER-----LNPEE--RIQIENGTLII 373
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 374 TMLNVSDSGIYQCAAEN 390
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 107/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I ++D
Sbjct: 42 SKSEIILNCAANGYPLPHYRWKQNGADID-----FTMSYHYRLDGGSLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
YQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 TYQCLATNSLGTILSQKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWIFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCLITNKEAQRRVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------ATLEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
>gi|224066635|ref|XP_002186834.1| PREDICTED: contactin-6 [Taeniopygia guttata]
Length = 1022
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 237/480 (49%), Gaps = 19/480 (3%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P +YSW +NG+ PL ++R I++ L I LN D +YQ
Sbjct: 317 SLFWECKARGKPSPSYSWLKNGQ-------PLMSEERIQIENGTLLIPMLNLS-DSGLYQ 368
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ T Y++A+LRV+ P F + P++ + GG VTI C P A+P+ W+K
Sbjct: 369 CVAENKYDTIYANAELRVIAAAPDFSRNPVKKLSVVQVGGQVTIGCKPSASPRAVVSWRK 428
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
++ R E+G+L IS +S+ D+G+Y+C ATN G + G LIV
Sbjct: 429 GLEVLRQNKRVVFLEDGSLRISNISKVDAGVYTCVATNQFGTARNSGNLIVKE--RTVIT 486
Query: 186 LPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLL 243
+PP T A ++ L C + LDV + W+ NG RI ++ ++ E G L+
Sbjct: 487 IPPSDTDATVGESIVLPCQVSHDPSLDVLFSWSFNGQRIDLSIGIHHFERIGRESAGDLM 546
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C+V++++ S +IV GPPG P V+V V T+A + W G
Sbjct: 547 -IRNIQLHHSGKYVCMVQTSLDSQSAAADIIVRGPPGPPEDVKVEHVSSTTAGLSWKPGV 605
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N P+ Y + RT ++ W + + GR + L PW YEF+V+A
Sbjct: 606 DNNSPVQIYSVQTRTPFSVGW-----QAVATAPEVINGRTHKATVVDLSPWVEYEFRVVA 660
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N +G GEPS PS T A P AP+ I GGGG +L I+WEP+ E QN Y
Sbjct: 661 SNSVGIGEPSRPSALLRTKAAVPVVAPTNISGGGGSRSELVITWEPVSEELQNGEGFGYI 720
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ +R T + + + V R S + +EVKV N+ G G S + I+
Sbjct: 721 VMFRPLGSTTWTKAVVASVESSKY-VYRNESITPLSPFEVKVGVYNNEGEGTLSSISIIY 779
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 117/277 (42%), Gaps = 34/277 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTR 75
P ++Y+W L N+ TL L + R F+ + E D Y C + R
Sbjct: 134 PGLSYTW-----LFNNNTLDLREDSRRFVSQATGNLYLAKVEPWDVGNYTCAVSSAEARR 188
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
LTL+ P + R E+ TYA +G +V + C P P WK+
Sbjct: 189 RVWGTPTALTLRGDGVMGEYEPKIEVRFPET-TYAAKGSSVRLECFALGNPVPSISWKRS 247
Query: 127 GNIIGSGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
GS +KI N G L I V ++D G Y C A N G++ ++G+L+V P +
Sbjct: 248 D---GSSLAKKIQHNRAGGVLEIPNVEQEDEGSYECMAGNTRGINIARGQLLVYAPPEWD 304
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+++ ++ + +L C A + +Y W NG + + I I+ G L
Sbjct: 305 KKIQNAF-LSLYDSLFWECKARGKP--SPSYSWLKNGQPL-------MSEERIQIENGTL 354
Query: 244 EITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
I + +D+G Y+CV ++ I + + VI P
Sbjct: 355 LIPMLNLSDSGLYQCVAENKYDTIYANAELRVIAAAP 391
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 30/289 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++ C A G P Y W +NG ++ L Y + L I + +D YQ
Sbjct: 28 EILLNCTAKGYPLPYYRWKQNGTDID-----LTMSYHYRLVGGSLAINNPHKNQDIGTYQ 82
Query: 66 CRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVW 123
C A N T S A+L+ L+ +F+ RP S EG V + C P P + W
Sbjct: 83 CLATNSFGTILSRKAKLQFAYLE-NFETRP-RSPVSVREGQGVVLLCGTPPRFPGLSYTW 140
Query: 124 KKDGNIIG--SGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGR--LIVLH 178
+ N + RR + + GNL ++ V D G Y+C ++ G + L
Sbjct: 141 LFNNNTLDLREDSRRFVSQATGNLYLAKVEPWDVGNYTCAVSSAEARRRVWGTPTALTLR 200
Query: 179 GPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
G + PKI + A +++L C A + +++ + + N
Sbjct: 201 GDGVMGEYEPKIEVRFPETTYAAKGSSVRLECFALGNPVPSISWKRSDGSSLAKKIQHNR 260
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
GG+LEI N D G YEC+ +T G + ++V PP
Sbjct: 261 A--------GGVLEIPNVEQEDEGSYECMAGNTRGINIARGQLLVYAPP 301
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+T C+ P SW + E+L +++ F++D L I ++ + D +Y
Sbjct: 408 GQVTIGCKPSASPRAVVSWRKGLEVLR------QNKRVVFLEDGSLRISNIS-KVDAGVY 460
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T +S L V+T+ PS +T A G ++ + C P
Sbjct: 461 TCVATNQFGTARNSGNLIVKERTVITIPPS--------DTDATVGESIVLPCQVSHDPSL 512
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
F W +G I FE G+L+I + SG Y C +
Sbjct: 513 DVLFSWSFNGQRIDLSIGIHHFERIGRESAGDLMIRNIQLHHSGKYVCMVQTSLDSQSAA 572
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L + + + + T +G +
Sbjct: 573 ADIIVRGPPGPPEDVKVEHVSSTTAGLSWKPGVDNNSPVQIYSVQTRTPFSVG---WQAV 629
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
T I+G + T + EYE V ++VG + TK V V P
Sbjct: 630 ATAPEVINGRTHKATVVDLSPWVEYEFRVVASNSVGIGEPSRPSALLRTKAAVPVVAPTN 689
Query: 281 LPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W ++ NG Y ++ R ++TW V E
Sbjct: 690 ISGGGG----SRSELVITWEPVSEELQNGEGF-GYIVMFRPLGSTTWTKAV--VASVESS 742
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
+Y R E+ + P S +E KV N G G SS S Y+ D+P AP+
Sbjct: 743 KYVYRNES-----ITPLSPFEVKVGVYNNEGEGTLSSISIIYSG-EDEPQMAPAGASALS 796
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ +SW P+P + + Y++ + + E + ++ GNV I
Sbjct: 797 VSAAAVEVSWLPIPWNRHTGRVLGYEVLYWIDDPKESTAGKVRVSGNV--TAKNITGLRA 854
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 855 NTVYFATVRAYNTAGTGPSSTPVNV 879
>gi|348575287|ref|XP_003473421.1| PREDICTED: contactin-6-like [Cavia porcellus]
Length = 1067
Score = 254 bits (649), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ Y W +NGE LNSE +R I++ LTI LN D +YQ
Sbjct: 373 SLYWECKASGKPNPWYMWLKNGERLNSE-------ERIQIENGTLTISMLN-MSDSGIYQ 424
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ + GG++TI C P A P+ WK+
Sbjct: 425 CAAENKYQIIYANAELRVLASAPDFSKSPIKKNSIVQIGGDITIECKPNAFPRAAISWKR 484
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G ++ G LIV +
Sbjct: 485 GTENVRQSKRVFLSEDGSLKIHNVTRSDAGPYTCVATNQFGNAKNTGSLIVKER-TVITV 543
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W+ NGV I DL + T I G G
Sbjct: 544 PPSKMDVTVGESIVLPCQVSHDPSIEVIFVWSFNGVII---DLQKRVTHFERIGGESVGD 600
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N + +G+Y C V++T+ +S +IV GPPG P V+V + T++ I W G
Sbjct: 601 LMIRNIQLSHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQISWRPG 660
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + + RT ++ W + + G+ + L W YEF+V+
Sbjct: 661 PDNNSPIQIFTVQTRTPFSVGW-----QAVATVPEILNGQTYNATVVGLSSWVEYEFRVV 715
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 716 AGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGGGRYELVITWESIPEELQNGEGFGY 775
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G GP S + +
Sbjct: 776 IIMFRPVGSTTWTKEKVALVESSRF-VYRNESIMSLSPFEVKVGVYNNEGEGPLSTMSIV 834
Query: 483 W 483
+
Sbjct: 835 Y 835
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 81 SRSEIILNCAASGYPSPHYRWKQNGTYID-----FTRNYHYKLDGGRLAISSPHTDQDIG 135
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
YQC A N L T S F+ + S EG V + C P P F
Sbjct: 136 TYQCLATNVLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 190
Query: 122 ----VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + ++ F E GNL I+ V D G Y+C TN +G
Sbjct: 191 DLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCFVTNKEAQRSVQGPP 250
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ + G
Sbjct: 251 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSLLPG 310
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 311 KVKHSKSQ--------AILEIPNFQEEDEGFYECIAGNLRGRNLAKGQLIFYAPP 357
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 28/256 (10%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRY 76
D++Y+W N L + ED+ R+ Q+ L I + P D Y C N+ R
Sbjct: 191 DLSYAWTFNDNPLYVQ----EDKRRFVSQETGNLYIAKVEPS-DVGNYTCFVTNKEAQRS 245
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L + P + R E+ A + +V + C P P W++ D
Sbjct: 246 VQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRLD 304
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G+++ G + L I +D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 305 GSLL-PGKVKHSKSQAILEIPNFQEEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQK 362
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ + +L C A + + Y+W NG R+ + + I I+ G L I+
Sbjct: 363 IQNTHLSIYDSLYWECKASGKP--NPWYMWLKNGERLNSEE-------RIQIENGTLTIS 413
Query: 247 NASFADAGEYECVVKS 262
+ +D+G Y+C ++
Sbjct: 414 MLNMSDSGIYQCAAEN 429
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 112/505 (22%), Positives = 183/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+T C+ P SW R E + + + + +D L I + D Y
Sbjct: 464 GDITIECKPNAFPRAAISWKRGTENVR------QSKRVFLSEDGSLKIHNVT-RSDAGPY 516
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ ++ L V+T+ PS + + GE ++ + C P
Sbjct: 517 TCVATNQFGNAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 568
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G II R FE G+L+I + SG Y CT +
Sbjct: 569 EVIFVWSFNGVIIDLQKRVTHFERIGGESVGDLMIRNIQLSHSGKYLCTVQTTLESLSAV 628
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + + R + + + T +G + +
Sbjct: 629 ADIIVRGPPGPPEDVRVEHISSTTSQISWRPGPDNNSPIQIFTVQTRTPFSVGWQAVATV 688
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V P
Sbjct: 689 --PEI-LNGQTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVN 745
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG + I W + NG Y I+ R ++TW E V E
Sbjct: 746 INGGGG----GRYELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVALVESS 798
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++ S +E KV N G G S+ S Y + D+P AP +
Sbjct: 799 RFVYRNES-----IMSLSPFEVKVGVYNNEGEGPLSTMSIVY-SGEDEPQLAPRGMSVQS 852
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 853 FSASEMEVSWNAVAWNRNTGRVLGYEVLYWTDDSKESTVGKIRVSGNV--TTKNITGLKA 910
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 911 NTIYFASVRAYNTAGTGPSSLPVNV 935
>gi|395516497|ref|XP_003762424.1| PREDICTED: contactin-3 [Sarcophilus harrisii]
Length = 1049
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 247/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NG+ L E +R +++ L+I +LN D MYQ
Sbjct: 354 NLYWECRASGKPKPSYRWLKNGDGLVIE-------ERVQLENGALSISFLN-VNDSGMYQ 405
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V C P+A+PK WKK
Sbjct: 406 CIAENKHGLIYSSAELKVVASAPDFSKNPMKKLIQVQIGSLVIFDCKPKASPKAHCSWKK 465
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
++ S R I ++G L I+ V++ D G Y+C A N G S LIV P+
Sbjct: 466 GDEVLQSSERITILKDGELQIANVTKLDVGTYTCLAENQFGKASSSTNLIVTE-PTRITL 524
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG-VRIGNMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG + D + E + G L+
Sbjct: 525 APSNMDVSVGESVILPCQVQHDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGSSSGDLM- 583
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 584 IRNIQLKHSGKYVCMVQTEVDSVSSAAELIVRGSPGPPESVKVDEITDTTAQLSWKEGTD 643
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+T Y I ART ++ W ++ D G+ + L PW YEF+V+A
Sbjct: 644 NHSPVTSYVIQARTPFSVGW-----QIVTTVPDVIDGKTFTATVVDLNPWVEYEFRVVAN 698
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 699 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 758
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 759 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESILSFSPYEVKVGVYNNKGEGPFSPVTTVFS 817
Query: 484 --HDPLVIISYVCQGDL 498
+P V S+V L
Sbjct: 818 AEEEPTVAPSHVLANSL 834
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 30/278 (10%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T CEA G P Y W NG ++ L + RY + L + N RD +
Sbjct: 63 EKKVTLNCEAKGNPSPHYRWQLNGSDID-----LSMEYRYKLNGGNLVVINPNRNRDTGI 117
Query: 64 YQCRAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKP 119
YQC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 118 YQCFASNSLGTVVSKEAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSY 175
Query: 120 KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL- 177
+++ + + + RR + E G+L I+ V D G Y+C T+ + G L
Sbjct: 176 AWIFNEYPSFVQEDRRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNNRVLGSPTPLV 235
Query: 178 ---------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ P Q P + A ++L C A + + N R +
Sbjct: 236 LRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQI------NWRRSDGLPF 289
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ + G+LEI N D+G YEC+ +++ GK
Sbjct: 290 S--SKIKMKKSNGMLEIPNFQQEDSGLYECIAENSRGK 325
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P+ W++ + S + NG L I ++DSG+Y C
Sbjct: 259 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKMKKSNGMLEIPNFQQEDSGLYECI 318
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++GRL P ++ Q+ + A NL C A + +Y W NG
Sbjct: 319 AENSRGKNVARGRLTYYAKP-HWVQMIKDVEAAVEDNLYWECRASGKP--KPSYRWLKNG 375
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ + E + ++ G L I+ + D+G Y+C+ ++ G I S + V+ P
Sbjct: 376 ---DGLVIEE----RVQLENGALSISFLNVNDSGMYQCIAENKHGLIYSSAELKVVASAP 428
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFEN 141
V +PS P++SE VT+ C + P P + W+ +G+ I S R
Sbjct: 47 VFIREPSNSIFPVDSEE-----KKVTLNCEAKGNPSPHYRWQLNGSDIDLSMEYRYKLNG 101
Query: 142 GNL-LISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
GNL +I+P D+GIY C A+N G SK +L + ++ ++ +++ + +
Sbjct: 102 GNLVVINPNRNRDTGIYQCFASNSLGTVVSKEAKLQFAYLENFKTKMRSTVSVREGQGVV 161
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 162 LLCGPPPHSGEL---SYAWIFNEYP---SFVQEDRRRFVSQETGHLYIAKVEPSDVGNYT 215
Query: 258 CVVKSTV 264
CVV STV
Sbjct: 216 CVVTSTV 222
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 179/498 (35%), Gaps = 54/498 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + C+ P SW + E+L S + ++D L I + + D Y C
Sbjct: 447 VIFDCKPKASPKAHCSWKKGDEVLQS------SERITILKDGELQIANVT-KLDVGTYTC 499
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWK 124
A+NQ SS L ++T P + GE +V + C + P F W
Sbjct: 500 LAENQFGKASSSTNL-IVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIVFTWY 556
Query: 125 KDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+G I FE +G+L+I + SG Y C S LIV
Sbjct: 557 FNGAITDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTEVDSVSSAAELIVRG 616
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNI 236
P E + K+ QL T+ V I +G + + P++
Sbjct: 617 SPGPPESV--KVDEITDTTAQLSWKEGTDNHSPVTSYVIQARTPFSVGWQIVTTV--PDV 672
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
IDG T EYE V + +G K+ T+ V P + GG
Sbjct: 673 -IDGKTFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGG 731
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG Y + R +TW + V + RY R
Sbjct: 732 G----SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFR 784
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E+ ++ +S YE KV N G G P SP + ++P APS +
Sbjct: 785 NES-----ILSFSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHVLANSLSSSI 838
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW+ +P + + + Y+I + E S +K GN A R+ Y
Sbjct: 839 IEVSWDAIPWKMSSGRLLGYEIRYWNNGGKEDSSNRVKVMGNETSA--RLQGLQSNLVYY 896
Query: 463 VKVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 897 TAVRAYNSAGTGPFSATV 914
>gi|426249263|ref|XP_004018369.1| PREDICTED: contactin-6 isoform 2 [Ovis aries]
Length = 956
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 236/480 (49%), Gaps = 21/480 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G PD Y+W +NGE LN E +R I++ L I LN D +YQC
Sbjct: 263 LFWECKASGKPDPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGIYQC 314
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + Y++A+LRVL P F K PL+ + GG++ I C P A P+ WK+
Sbjct: 315 AAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISWKRG 374
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + E+G+L I V+R D+G+Y+C ATN G+ ++ G LI+ +
Sbjct: 375 IESLRQSKRVFLLEDGSLKIYNVTRSDAGVYTCIATNQFGVAKNTGSLIIKER-TVITVP 433
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 243
P K+ + ++ L C + ++V ++W+ NG I D + I G G L
Sbjct: 434 PSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI---DFKKGVAHFERIGGDSVGDL 490
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C VK+T+ +S +IV GPPG P V+V + S + W G+
Sbjct: 491 MIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPGPPEDVRVTHISSASCQLSWRPGS 550
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI + I ART ++ W + + G+ + L PW YEF+V+A
Sbjct: 551 DNNSPIQIFSIQARTPFSVGW-----QAVSTVPEILNGKTFNATVVALNPWVEYEFRVVA 605
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
GN +G GEPS PS T A P AP+ I GGGG +L I+WE +P E QN + Y
Sbjct: 606 GNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSRSELIITWESIPEELQNGEDFGYI 665
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ R T + E + + + R + + +EVKV N G GP S I+
Sbjct: 666 VMLRPVGSTTWTKERVPSVESSRF-IYRNENIIPLSPFEVKVGVYNKEGEGPLSTASIIY 724
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 187/500 (37%), Gaps = 50/500 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P T SW R E L + + + ++D L I Y D +Y
Sbjct: 353 GDIVIECKPNAFPRATISWKRGIESLR------QSKRVFLLEDGSLKI-YNVTRSDAGVY 405
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ ++ L ++ + P + + GE ++ + C P + FV
Sbjct: 406 TCIATNQFGVAKNTGSL-IIKERTVITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFV 462
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G++I FE G+L+I + + SG Y CT + G +IV
Sbjct: 463 WSFNGDVIDFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIV 522
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + +A L R + + + I +G ++ + P I
Sbjct: 523 RGPPGPPEDVRVTHISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI 580
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V +++G + TK +V P + GG
Sbjct: 581 -LNGKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGG 639
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG Y ++ R ++TW E V E R+ R
Sbjct: 640 G----SRSELIITWESIPEELQNGEDF-GYIVMLRPVGSTTW--TKERVPSVESSRFIYR 692
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E ++P S +E KV N+ G G S+ S Y+ D+P AP +
Sbjct: 693 NEN-----IIPLSPFEVKVGVYNKEGEGPLSTASIIYSG-EDEPQLAPRGTSVQSFSASE 746
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW + + + Y++ + + E ++ GN I I T Y
Sbjct: 747 MEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITGLKANTVYF 804
Query: 463 VKVQAINDVGPGPESEVVTI 482
V+A N G GP S V +
Sbjct: 805 ASVRAYNTAGTGPSSPPVNV 824
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W + N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 80 DLSYAW-----IFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCLITNKEAQR 133
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 134 RVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 192
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG+ + G + L I ++D G Y C A+N+ G + +KG+LI + P +EQ
Sbjct: 193 DGSPL-PGKVKYSKSQATLEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWEQ 250
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + D Y W NG R LN E I I+ G L I
Sbjct: 251 KIQNTYLSIYDSLFWECKASGKP--DPWYTWLKNGER-----LNPEE--RIQIENGTLII 301
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 302 TMLNVSDSGIYQCAAEN 318
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 91/255 (35%), Gaps = 31/255 (12%)
Query: 43 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 102
Y + L I ++D YQC A N L T S F+ + S
Sbjct: 5 YRLDGGSLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAYIEDFETK-TRSTVSVR 63
Query: 103 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 154
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWIFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 119
Query: 155 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 204
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCLITNKEAQRRVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
+ D+++ G + ++ + LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------ATLEIPNFQQEDEGFYECIASNLR 231
Query: 265 GKISTKTTVIVEGPP 279
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
>gi|426339220|ref|XP_004033556.1| PREDICTED: contactin-6 isoform 2 [Gorilla gorilla gorilla]
Length = 956
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 262 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 313
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 314 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR 373
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 374 GTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 432
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 433 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 489
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 490 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 549
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 550 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 604
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 605 AGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGDGFGY 664
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 665 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 723
Query: 483 W 483
+
Sbjct: 724 Y 724
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 353 GDIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 405
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 406 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 457
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 458 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 517
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 518 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 577
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 578 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVN 634
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 635 IHGGGG----SRSELVITWESIPEELQNGDGF-GYIIMFRPVGSTTW--SKEKVSSVESS 687
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 688 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 741
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 742 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 799
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 800 NTIYFASVRAYNTAGTGPSSPPVNV 824
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 80 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 133
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 134 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 192
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 193 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 249
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 250 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 300
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 301 ITMLNVSDSGVYQCAAEN 318
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 94/256 (36%), Gaps = 31/256 (12%)
Query: 42 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 101
Y + L I + ++D MYQC A N L T S F+ + S
Sbjct: 4 HYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSV 62
Query: 102 GEGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDD 153
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 63 REGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSD 118
Query: 154 SGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCS 203
G Y+C TN +G L + P + P I A +++L C
Sbjct: 119 VGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECF 178
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A + D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 179 ALGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNL 230
Query: 264 VGKISTKTTVIVEGPP 279
G+ K +I PP
Sbjct: 231 RGRNLAKGQLIFYAPP 246
>gi|426339218|ref|XP_004033555.1| PREDICTED: contactin-6 isoform 1 [Gorilla gorilla gorilla]
Length = 1028
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 446 GTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 562 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGDGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 530 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 IHGGGG----SRSELVITWESIPEELQNGDGF-GYIIMFRPVGSTTW--SKEKVSSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 109/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEVILNCAANSYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAINSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>gi|7657361|ref|NP_055276.1| contactin-6 precursor [Homo sapiens]
gi|55976622|sp|Q9UQ52.1|CNTN6_HUMAN RecName: Full=Contactin-6; AltName: Full=Neural recognition
molecule NB-3; Short=hNB-3; Flags: Precursor
gi|5631291|dbj|BAA82612.1| neural adhesion molecule NB-3 [Homo sapiens]
gi|86577727|gb|AAI13119.1| Contactin 6 [Homo sapiens]
gi|119584275|gb|EAW63871.1| contactin 6, isoform CRA_a [Homo sapiens]
gi|119584276|gb|EAW63872.1| contactin 6, isoform CRA_a [Homo sapiens]
Length = 1028
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 446 GTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 562 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEVILNCAANGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAINSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 530 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 IHGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTHLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>gi|449283519|gb|EMC90135.1| Contactin-3, partial [Columba livia]
Length = 908
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 237/478 (49%), Gaps = 17/478 (3%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NGE L+ E R I++ LTI LN D YQC
Sbjct: 215 LYWDCRASGKPKPSYRWVKNGEQLSVE-------GRIQIENGALTISNLN-LTDSGRYQC 266
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+LRV+ P F K P++ G V C P+A+PK K WKK
Sbjct: 267 IAENKHGVIYSSAELRVVASAPDFSKNPMKKLIQVQIGSTVDFECKPKASPKAKCSWKKG 326
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + R + ++G L I+ V++ D+G Y+C ATN G LIV P+
Sbjct: 327 GEQLHENERITLLKDGGLRIANVTKVDAGSYTCLATNQFGTASGSTNLIVTE-PTRIILA 385
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + + ++ L C + +LD+++ W NG D + E + G L+ I
Sbjct: 386 PSSMDVTVGESVVLPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLM-I 444
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+VK+ V +++ +IV G PG P V+V E+ T+A I W +G N
Sbjct: 445 RNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVKVDEITDTTAQISWQEGTDN 504
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+T Y + ART ++ W V+ D G+ + L PW YEF+V+A N
Sbjct: 505 HSPVTTYTVQARTPFSVGWQRVT-----TVPDVIDGKTFTTTVVDLNPWVEYEFRVVASN 559
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 560 KIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVA 619
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 620 FRPYGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSSVTTVF 676
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P+ W++ + + NG + I ++D+G+Y C
Sbjct: 119 AAKGSTVKLECFALGNPVPQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECI 178
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
N G + ++GRL P + + + +A L C A + +Y W NG
Sbjct: 179 TENSRGKNIARGRLTYYAKPHWIQTI-KDTEVAVEDTLYWDCRASGKP--KPSYRWVKNG 235
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
++ I I+ G L I+N + D+G Y+C+ ++ G I S + V+ P
Sbjct: 236 EQLSVEG-------RIQIENGALTISNLNLTDSGRYQCIAENKHGVIYSSAELRVVASAP 288
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 180/494 (36%), Gaps = 54/494 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + GE L+ E++ ++D L I + + D Y C A N
Sbjct: 311 CKPKASPKAKCSWKKGGEQLH------ENERITLLKDGGLRIANVT-KVDAGSYTCLATN 363
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q T S L ++T P + GE +V + C + P F W +G
Sbjct: 364 QFGTASGSTNL-IVTEPTRIILAPSSMDVTVGE--SVVLPCQVQHDPILDISFTWYFNGT 420
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 421 LTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGP 480
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + K+ Q+ T+ V +T ++ + T IDG
Sbjct: 481 PEHV--KVDEITDTTAQISWQEGTDNHSPVT-TYTVQARTPFSVGWQRVTTVPDVIDGKT 537
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
T EYE V + +G K+ T+ V P + GG
Sbjct: 538 FTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGG----S 593
Query: 292 KTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 594 RSELVITWDPIPEELQNGEGF-GYVVAFRPYGTTTW--IQTVVTSPDTPRYVFRNES--- 647
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
++P+S YE KV N G G SS + ++ ++P APS + + +SW
Sbjct: 648 --ILPFSPYEVKVGVYNNKGEGPFSSVTTVFSA-EEEPSIAPSGVSATSLSSSVIEVSWT 704
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEF-YYTEYEVKVQ 466
+P + + + Y++ + E S +K GN I + + S YYT V+
Sbjct: 705 AIPWKMSSGRLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYT----AVR 760
Query: 467 AINDVGPGPESEVV 480
A N G GP S V
Sbjct: 761 AYNSAGAGPFSATV 774
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 88/233 (37%), Gaps = 24/233 (10%)
Query: 95 LESETYAGEGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVS 150
+ S EG V + C P A F W + + + RR + E G+L I+ V
Sbjct: 8 MRSAVSVREGQGVVLLCGPPPRAGDLSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVD 67
Query: 151 RDDSGIYSC----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQL 200
D G Y+C T TN + ++ G P Q P + A ++L
Sbjct: 68 PSDVGNYTCVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKL 127
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
C A + + + T + L + G++EI N DAG YEC+
Sbjct: 128 ECFALGNPVPQINWRRTDGLPFPSKIKLRK--------SNGMIEIPNFQQEDAGLYECIT 179
Query: 261 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 313
+++ GK + + P ++ EV T+ W D +G+P Y+
Sbjct: 180 ENSRGKNIARGRLTYYAKPHWIQTIKDTEV-AVEDTLYW-DCRASGKPKPSYR 230
>gi|9506949|ref|NP_062202.1| contactin-3 precursor [Rattus norvegicus]
gi|55976163|sp|Q62682.1|CNTN3_RAT RecName: Full=Contactin-3; AltName: Full=Brain-derived
immunoglobulin superfamily protein 1; Short=BIG-1;
Flags: Precursor
gi|563133|gb|AAA63607.1| BIG-1 protein [Rattus norvegicus]
Length = 1028
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/496 (33%), Positives = 246/496 (49%), Gaps = 20/496 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L E +R I++ LTI LN D M+QC
Sbjct: 335 LYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENGALTIANLNVS-DSGMFQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+L+VL P F + P++ G V + C P A+P+ WKK
Sbjct: 387 IAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKKG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R + +G L I V++ D+GIY+C A N G +L+V P+
Sbjct: 447 DTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTE-PTRIILA 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + +A ++ L C + LLD+ + W NG D + E + G L+ I
Sbjct: 506 PSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGSSSGDLM-I 564
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + WT+G +
Sbjct: 565 RNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDS 624
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+ Y + ART ++ W NV + + +D T R +E L PW YEF+V+A N
Sbjct: 625 HSPVISYAVQARTPFSVGWQNV--RTVPEAIDGKT-RTATVVE--LNPWVEYEFRVVASN 679
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y +
Sbjct: 680 KIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVA 739
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW-- 483
+R T + + N V R S ++ YEVKV N+ G GP S V T++
Sbjct: 740 FRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSA 798
Query: 484 -HDPLVIISYVCQGDL 498
+P V S++ L
Sbjct: 799 EEEPTVAPSHISAHSL 814
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSL-----DHRYKLNGGNLIV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK R + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKSR-MRSRVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+V+ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R M
Sbjct: 217 RSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQI------NWRRSDGMPFP 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+++ N G+LEI N D G YEC+ +++ GK
Sbjct: 271 TKIKLRKFN---GVLEIPNFQQEDTGSYECIAENSRGK 305
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIKLRKF-NGVLEIPNFQQEDTGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P Y+ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWVQLLKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G D LE I I+ G L I N + +D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 174/478 (36%), Gaps = 60/478 (12%)
Query: 33 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 92
+T+ E + D L I + + D +Y C A+NQ + QL V+T
Sbjct: 447 DTVVREQARISLLNDGGLKIMNVT-KADAGIYTCIAENQFGKANGTTQL-VVTEPTRIIL 504
Query: 93 RPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE------NGNL 144
P + GE ++ + C + P F W +G + FE +G+L
Sbjct: 505 APSNMDVAVGE--SIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGSSSGDL 562
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
+I + SG Y C S LIV P E + K+ QL +
Sbjct: 563 MIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDEITDTTAQLSWTE 620
Query: 205 HTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVV 260
T+ V + +G ++ + IDG T EYE V
Sbjct: 621 GTDSHSPVISYAVQARTPFSVGWQNVRTVPEA---IDGKTRTATVVELNPWVEYEFRVVA 677
Query: 261 KSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGAT 304
+ +G K+ T+ P + GG ++ I W +G
Sbjct: 678 SNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGG----SRSELVITWDPVPEELQNGGG 733
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
G + ++ + T W + V + RY R E+ +VP+S YE KV
Sbjct: 734 FGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IVPFSPYEVKVGVY 781
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N G G P SP + ++P APS I ++ +SW +P + N + Y++
Sbjct: 782 NNKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSNGRLLGYEV 840
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
+ E S +K GN AV+R + S YYT V+A N G GP S V
Sbjct: 841 RYWNNGGEEESSSKVKVAGNQTSAVLRGLKSNLAYYT----AVRAYNTAGAGPFSATV 894
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I + R
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ ++++ + +
Sbjct: 81 GGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWVFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>gi|426339222|ref|XP_004033557.1| PREDICTED: contactin-6 isoform 3 [Gorilla gorilla gorilla]
Length = 1019
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 325 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 376
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 377 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR 436
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 437 GTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 495
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 496 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 552
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 553 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 612
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 613 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 667
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 668 AGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGDGFGY 727
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 728 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 786
Query: 483 W 483
+
Sbjct: 787 Y 787
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 109/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A P Y W +NG ++ Y + L I + ++D
Sbjct: 33 SKSEVILNCAANSYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAINSPHTDQDIG 87
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 88 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 142
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 143 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 202
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 203 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 262
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 263 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 309
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 416 GDIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 468
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 469 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 520
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 521 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 580
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 581 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 640
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 641 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVN 697
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 698 IHGGGG----SRSELVITWESIPEELQNGDGF-GYIIMFRPVGSTTW--SKEKVSSVESS 750
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 751 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 804
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 805 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 862
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 863 NTIYFASVRAYNTAGTGPSSPPVNV 887
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 143 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 196
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 197 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 255
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 256 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 312
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 313 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 363
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 364 ITMLNVSDSGVYQCAAEN 381
>gi|397522457|ref|XP_003831283.1| PREDICTED: contactin-6 isoform 2 [Pan paniscus]
Length = 956
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 262 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 313
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 314 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR 373
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 374 GRETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 432
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 433 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 489
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 490 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 549
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 550 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 604
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 605 AGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGY 664
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 665 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 723
Query: 483 W 483
+
Sbjct: 724 Y 724
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 353 GDIVIGCKPNAFPRAAISWKRGRETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 405
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 406 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 457
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 458 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 517
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 518 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 577
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 578 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVN 634
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 635 IHGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 687
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 688 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 741
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 742 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 799
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 800 NTIYFASVRAYNTAGTGPSSPPVNV 824
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 80 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 133
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 134 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 192
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 193 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 249
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 250 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 300
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 301 ITMLNVSDSGVYQCAAEN 318
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 94/256 (36%), Gaps = 31/256 (12%)
Query: 42 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 101
Y + L I + ++D MYQC A N L T S F+ + S
Sbjct: 4 HYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSV 62
Query: 102 GEGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDD 153
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 63 REGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSD 118
Query: 154 SGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCS 203
G Y+C TN +G L + P + P I A +++L C
Sbjct: 119 VGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECF 178
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A + D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 179 ALGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNL 230
Query: 264 VGKISTKTTVIVEGPP 279
G+ K +I PP
Sbjct: 231 RGRNLAKGQLIFYAPP 246
>gi|397522455|ref|XP_003831282.1| PREDICTED: contactin-6 isoform 1 [Pan paniscus]
Length = 1028
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 446 GRETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 562 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEVVLNCAANGYPSPRYRWKQNGTDID-----FTMSYHYRLDGGSLAINSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIGCKPNAFPRAAISWKRGRETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 530 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 IHGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>gi|326679017|ref|XP_001340839.4| PREDICTED: contactin-3-like [Danio rerio]
Length = 991
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 236/477 (49%), Gaps = 17/477 (3%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G P +YSW +NGELL +E DR I++ LTI +N D MYQC
Sbjct: 303 LFWECKANGKPKPSYSWLKNGELLAAE-------DRIQIENGALTISSVNLS-DAGMYQC 354
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ Y A+L VL P F + PL + A G VT+ C P+A P +W+K
Sbjct: 355 VAENKHGIIYFGAELVVLASPPDFSRSPLRTLLKAKTGSTVTMECKPQAFPSAITLWRKG 414
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R +G L ++ V++ D G Y+C A N G + GRL+V P+ Q
Sbjct: 415 NEVMQRTDRITFLPDGTLRLTNVTKMDGGNYACLARNQFGTASTSGRLLVTD-PTQITQG 473
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + I ++ L C + LDV++ W NG + +D E + G L+ I
Sbjct: 474 PMDMEIIVGESIVLPCQISCDPALDVSFSWAFNGQLLSKLD-QHYEHVGGSTSGDLM-IR 531
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N AG+Y CVV + V +S +IV+GPPG P GV V E+ ++A + W G NG
Sbjct: 532 NIQLKHAGKYVCVVDTDVESLSAAAILIVKGPPGAPDGVTVEEITDSTAQLSWRPGQDNG 591
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PIT Y I A+T + W V + + + +D G + L W +EF+V+A N
Sbjct: 592 SPITSYIIQAKTAFTVGWQAV--NTVPEVID---GNTLTATVVDLNAWVEFEFRVLARNS 646
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G GEPS S + T P AP+ +GGGGG +L I+WEP+P + QN Y I +
Sbjct: 647 VGVGEPSPASLKTRTEDAVPDTAPTDVGGGGGSKSELVITWEPVPEDLQNGDGFGYIIAF 706
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
R + + + + V R S ++ + VKV A N G GP S V ++
Sbjct: 707 RPLGEVNW-THAVTSVPTQSRYVYRNESILPFSPFSVKVGAYNTKGQGPFSPVTIVF 762
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 115/280 (41%), Gaps = 35/280 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ + T C+A G+P Y W NG L+N L R + L IR L+ +D +
Sbjct: 12 EEEATLACDAKGIPAPQYRWSLNGTLIN-----LSTDSRRRLSGGNLVIRSLDRAQDGGI 66
Query: 64 YQCRAKN---QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKP 119
YQC A N + +R +S Q L LK + S EG V + C P A
Sbjct: 67 YQCTAFNPHGAILSRRASLQFAYLNLKTQTR-----SAVSVREGQGVVLLCGTPSYAGDL 121
Query: 120 KFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATN--VHGMDESKGRL 174
F W + + RR + E GNL I+ V D G Y+C N G S
Sbjct: 122 SFAWVFNEYPYFVQQDNRRFVSQETGNLYIAKVEPSDVGNYTCVVVNRITKGKVLSSPTP 181
Query: 175 IVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+VL + PKI + A + L C A + ++ + N V
Sbjct: 182 LVLRTDGVMGEYEPKIEVHFSDMVPAAKGSVVTLECFALGNPVPEITW-RRANAVPFP-- 238
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
++++ N N+ +LEI + DAG YECV ++ +GK
Sbjct: 239 --SKVKMKNSNV---VLEIPSFQQEDAGGYECVAENKMGK 273
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G VT+ C P P+ W++ + + N L I ++D+G Y C
Sbjct: 207 AAKGSVVTLECFALGNPVPEITWRRANAVPFPSKVKMKNSNVVLEIPSFQQEDAGGYECV 266
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + +GRL H + Q I ++ L C A+ + +Y W NG
Sbjct: 267 AENKMGKNTVQGRL-SFHAKPQWVQTMRDIALSIEERLFWECKANGKP--KPSYSWLKNG 323
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ D I I+ G L I++ + +DAG Y+CV ++ G I ++V P
Sbjct: 324 ELLAAED-------RIQIENGALTISSVNLSDAGMYQCVAENKHGIIYFGAELVVLASP 375
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 196/515 (38%), Gaps = 84/515 (16%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAM 63
+ +T C+ P W + E++ + DR F+ D L + + + D
Sbjct: 393 STVTMECKPQAFPSAITLWRKGNEVM-------QRTDRITFLPDGTLRLTNVT-KMDGGN 444
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV--TIFCNPEAAPKPKF 121
Y C A+NQ T +S +L V T + P++ E GE + I C+P A F
Sbjct: 445 YACLARNQFGTASTSGRLLV-TDPTQITQGPMDMEIIVGESIVLPCQISCDP--ALDVSF 501
Query: 122 VWKKDGNIIGS--------GGRRKIFENGNLLISPVSRDDSGIYSCTA-TNVHGMDESKG 172
W +G ++ GG +G+L+I + +G Y C T+V + S
Sbjct: 502 SWAFNGQLLSKLDQHYEHVGGS----TSGDLMIRNIQLKHAGKYVCVVDTDVESL--SAA 555
Query: 173 RLIVLHGPSYYEQLPPKITIA----AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
++++ GP P +T+ + L R + I +G +
Sbjct: 556 AILIVKGP---PGAPDGVTVEEITDSTAQLSWRPGQDNGSPITSYIIQAKTAFTVGWQAV 612
Query: 229 NELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEG 277
N + P + IDG L T E+E + +++VG K T+ V
Sbjct: 613 NTV--PEV-IDGNTLTATVVDLNAWVEFEFRVLARNSVGVGEPSPASLKTRTEDAVPDTA 669
Query: 278 PPGLPGGVQVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHV 331
P + GG K+ I W + NG I ++ + NW +V
Sbjct: 670 PTDVGGGGG----SKSELVITWEPVPEDLQNGDGFGYIIAFRPLGEVNWTHAVTSVPTQ- 724
Query: 332 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
RY R E+ ++P+S + KV A N G G P SP + ++P P
Sbjct: 725 -----SRYVYRNES-----ILPFSPFSVKVGAYNTKGQG-PFSPVTIVFSAENEPSGVPD 773
Query: 392 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV-- 449
+ ++ +SW L + Y ++W ++DT + ET+ G V ++
Sbjct: 774 GVWARSISATEIEVSWHILSVSTERVLG-YEVVYW--EDDT--KPETM---GKVRVSANQ 825
Query: 450 --VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
V I YT+Y + V A N G GP S + +
Sbjct: 826 DKVNISGLRGYTQYFLTVSAFNTAGTGPLSPTINV 860
>gi|431901434|gb|ELK08460.1| Contactin-1 [Pteropus alecto]
Length = 1125
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 247/483 (51%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 290 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHKGELRLYD------------VTFENA--- 334
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 335 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 393
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + +G R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 394 FSWSKGTEWLVNGSRTLIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 452
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 453 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDA 512
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 513 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 572
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 573 SRGSDNHSPISKYNIQTKTLLSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 627
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 628 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 687
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ ++G V + + +T ++VKV+A N+ G GP S
Sbjct: 688 FGYIVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMRPFTAFQVKVKAFNNKGDGPYSLT 746
Query: 480 VTI 482
I
Sbjct: 747 AVI 749
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 191/498 (38%), Gaps = 65/498 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELL--NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
C+ P +SW + E L S TL ED ++ N +T D +Y C A
Sbjct: 384 CKPKAAPKPKFSWSKGTEWLVNGSRTLIWEDGS---LEINNIT------RNDGGIYTCFA 434
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N S+ L V+T P+ ++ GE + + + A F+W +G
Sbjct: 435 ENNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGY 493
Query: 129 IIGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 494 VIDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPG 553
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
L +I ++ L S ++ ++ + + D + +T I+G
Sbjct: 554 PPGGL--RIEDIRATSVALTWSRGSDNHSPISKYNIQTKTLLSD-DWKDAKTDPPIIEGN 610
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
+ EYE V ++T T I G P +P ++ + + +D
Sbjct: 611 MEAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSD 660
Query: 302 ---GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGR 342
G + R +T HY I+A ++ W V+ V ++ RY +
Sbjct: 661 VGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDIGRYVHK 718
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E + P++ ++ KV A N G G P S + N+ D P +AP+ +G +
Sbjct: 719 DE-----TMRPFTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTGVGVKVLSSSE 772
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+S+ WE + + + I Y K+ +EY R+ + T+Y
Sbjct: 773 ISVHWEHVVEKVVESYQIRYWSVHDKEAAAHRVQVNSQEYS------ARLENLLPDTQYS 826
Query: 463 VKVQAINDVGPGPESEVV 480
V+V+A N G GP SE++
Sbjct: 827 VEVRACNSAGCGPPSEMI 844
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 115 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 169
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 170 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 229
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N+ G D+ + R+ V P +
Sbjct: 230 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENIRGKDKHQARIYVQAFPEW 281
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 282 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHKGE 323
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 324 LRLYDVTFENAGMYQCIAENTYGAI 348
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 17/186 (9%)
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+W+ + I R GNL+I+ P + D+G+Y C A+N +G+ S +
Sbjct: 24 IWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGIVRSTEATLSF--- 80
Query: 181 SYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPN 235
Y + P P++ + + + L C D++Y W N + MD
Sbjct: 81 GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF---- 136
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
++ G L I N +D G Y C V S S +V + P +P + + +
Sbjct: 137 VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFIPLIPLPERTTKPYPADI 192
Query: 296 TIQWTD 301
+Q+ D
Sbjct: 193 VVQFKD 198
>gi|358418120|ref|XP_600040.6| PREDICTED: contactin-4 [Bos taurus]
Length = 1026
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 238/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTRDRIHIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +SSA+L V+ + P F + L+ T GG V I C P+A+PKP W
Sbjct: 382 YQCVAENKHGVIFSSAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVHTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +++ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTKV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + L++ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W V + + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+ E +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITCETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I + RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + +KG+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVAKGQLTFYAQPNWSQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 406
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 124/318 (38%), Gaps = 32/318 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D MYQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGMYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S +G + + C P A + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKPR-TRSTVSVRQGQGMVLLCGPPAHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--------- 177
RR + E GNL I+ V + D G Y+C TN + G L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNQKVLGPPTPLILRNDGVMG 221
Query: 178 -HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ P Q P + A ++L C A + + IW +G I
Sbjct: 222 EYEPKIEVQFPETVPTAKGTTVKLECFALGNPVPTI--IWRRADGKPIATKARR------ 273
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
+ G+LEI N DAG YECV +++ GK K + P + + V
Sbjct: 274 -HKSNGILEIPNFQQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWSQKINDIHV-AIEE 331
Query: 296 TIQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 332 NVFW-ECKANGRPKPTYR 348
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 44/212 (20%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHR 196
L+ +P D+G+Y C ATN G S+ + +Y E P+ +++ +
Sbjct: 82 GSLLINNPNKTQDAGMYQCIATNSFGTIVSREAKLQF---AYLENFKPRTRSTVSVRQGQ 138
Query: 197 NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITN 247
+ L C AH+ EL +Y W N E P+ ++ + G L I
Sbjct: 139 GMVLLCGPPAHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAK 183
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 184 VEKSDVGNYTCVVTNTV------TNQKVLGPP 209
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 174/492 (35%), Gaps = 46/492 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P ++W + ++L ++ +R I ++ ++R +N + D Y C A
Sbjct: 429 CKPKASPKPVHTWKKGRDVL-------KENERITISEDG-SLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G +
Sbjct: 481 NHFGTASSTGNL-VVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G +N + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLP-----GGVQVVEV 290
T EYE V + +G + S K P P GG E+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
T T+ + NGR Y + R W + + RY R E+
Sbjct: 717 VITCETVP--EELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES----- 766
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
+ P+S +E KV N G G P SP+ + ++P + P+ I D+ + W
Sbjct: 767 VRPFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS- 824
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
P EK Y++ + + +D E + ++ GN +I + Y + V+A N
Sbjct: 825 PMEKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKITNLKGSALYHLAVKAYNS 882
Query: 471 VGPGPESEVVTI 482
G GP S V +
Sbjct: 883 AGTGPASATVNV 894
>gi|326928156|ref|XP_003210247.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6-like [Meleagris
gallopavo]
Length = 1057
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/479 (31%), Positives = 235/479 (49%), Gaps = 17/479 (3%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A P +YSW +NG+ PL ++R +++ L I +N D +YQ
Sbjct: 363 SLFWECKAKXKPTPSYSWLKNGQ-------PLMSEERIQVENGTLIIPMVN-MSDSGLYQ 414
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ T Y+SA+LRV+ P F K P++ + GG VTI C P A+P+ W+K
Sbjct: 415 CVAENKYDTIYASAELRVIAAAPDFSKNPVKKTSVVQVGGEVTIACRPSASPRAAIDWRK 474
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
++ R + E+G+L + +++ D+G+Y+C ATN G+ + G LIV +
Sbjct: 475 GPEVLRLNKRALLLEDGSLRLYNITKSDAGVYTCIATNQFGVARNSGNLIVKER-TVITI 533
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + + ++ L C + + V + W+ NG +I +++ E G L+
Sbjct: 534 PPSNMDVTVGESIVLPCQVSHDPSIAVVFTWSFNGNKIDFKREMHHFERIGGESVGDLM- 592
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N G+Y C+V++T+ ST VIV GPPG P V+V + T+A + W G
Sbjct: 593 IRNIQLHHTGKYVCMVQTTLDSQSTAVDVIVRGPPGPPENVRVEHISSTTAVLSWKSGID 652
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I RT ++ W + + +GR + L PW YEF+V+A
Sbjct: 653 NNSPVQIYSIQTRTPFSVGW-----QAVSTVPEVLSGRTHKATLVDLSPWVEYEFRVVAS 707
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N +G GEPS PS T A P AP+ + GGGG +L I+WEP+P E QN Y +
Sbjct: 708 NSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGGSRSELVITWEPVPEELQNGEGFGYIV 767
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + + V R S + +EVKV N+ G G S V ++
Sbjct: 768 MFRPLGSTTWTKAAVAPV-EASKYVYRNESITPLSPFEVKVGVYNNEGEGTLSSVSIVY 825
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 40/280 (14%)
Query: 19 VTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTRY 76
++++W N TL +++ R F+ L I + P D Y C N +
Sbjct: 178 LSFAW-----TFNKNTLYVQEDRRRFVSQETGNLYIAKVEP-WDVGNYTCVVTNSKAGQS 231
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
LTL+ P + R E+ TYA +G +V + C P P W++
Sbjct: 232 VQGPPTPLTLRSDGVMGEYEPKIEARFPET-TYAAKGSSVKLECFALGNPVPNISWRRSD 290
Query: 128 NIIGSGGRRKIFENGN--LLISP-----VSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
GS +KI + N +L P V ++D G Y C A N+ G + ++G+L V P
Sbjct: 291 ---GSSLTKKIERDKNKGVLEIPDVQQXVQQEDEGSYECIAENIRGRNIARGQLFVYALP 347
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ +++ ++ + +L C A + +Y W NG + + I ++
Sbjct: 348 EWDKKIENAF-LSLYDSLFWECKAKXKP--TPSYSWLKNGQPL-------MSEERIQVEN 397
Query: 241 GLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
G L I + +D+G Y+CV ++ I S + VI P
Sbjct: 398 GTLIIPMVNMSDSGLYQCVAENKYDTIYASAELRVIAAAP 437
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 184/507 (36%), Gaps = 66/507 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELL--NSETLPLEDQDRYFIQDNVLTIRYLN-PERDPA 62
++T C P W + E+L N L LED ++R N + D
Sbjct: 455 EVTIACRPSASPRAAIDWRKGPEVLRLNKRALLLEDG----------SLRLYNITKSDAG 504
Query: 63 MYQCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+Y C A NQ +S L V+T+ PS + GE ++ + C P
Sbjct: 505 VYTCIATNQFGVARNSGNLIVKERTVITIPPS------NMDVTVGE--SIVLPCQVSHDP 556
Query: 118 KPK--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDE 169
F W +GN I FE G+L+I + +G Y C
Sbjct: 557 SIAVVFTWSFNGNKIDFKREMHHFERIGGESVGDLMIRNIQLHHTGKYVCMVQTTLDSQS 616
Query: 170 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ +IV P E + + + L + + + I T +G ++
Sbjct: 617 TAVDVIVRGPPGPPENVRVEHISSTTAVLSWKSGIDNNSPVQIYSIQTRTPFSVGWQAVS 676
Query: 230 ELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVGK---------ISTKTTVIVEGP 278
+ P + + G + T + EYE V ++VG + TK V P
Sbjct: 677 TV--PEV-LSGRTHKATLVDLSPWVEYEFRVVASNSVGTGEPSKPSALLKTKAAVPTVAP 733
Query: 279 PGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
+ GG ++ I W + NG Y ++ R ++TW + V E
Sbjct: 734 TNVSGGGG----SRSELVITWEPVPEELQNGEGF-GYIVMFRPLGSTTWTKAA--VAPVE 786
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
+Y R E+ + P S +E KV N G G SS S Y+ D+P AP+
Sbjct: 787 ASKYVYRNES-----ITPLSPFEVKVGVYNNEGEGTLSSVSIVYSG-EDEPQIAPAGTSA 840
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 455
++ +SW+P+ + + Y++ + + E + ++ GN I I
Sbjct: 841 LSISAAEVEVSWQPVAWNRHTGRVLGYEVLYWTDDPKESTAGKVRVNGN--ITAQNITGL 898
Query: 456 FYYTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 899 KANTVYFATVRAYNTAGMGPSSAPVNV 925
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 112/293 (38%), Gaps = 34/293 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++ C A G P Y W +NG ++ L Y + L I ++D YQ
Sbjct: 70 EVLLNCTAKGYPLPNYRWKQNGTDID-----LTMSYHYRLVGGSLAINNPRKKQDIGTYQ 124
Query: 66 CRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVW 123
C A N T S A+L+ L+ +F+ + S EG V + C P F W
Sbjct: 125 CLATNSFGTILSRKAKLQFAYLE-NFEMK-TRSTVSVREGQGVVLLCGPPPHHGGLSFAW 182
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--- 177
+ N + R+ F E GNL I+ V D G Y+C TN +G L
Sbjct: 183 TFNKNTLYVQEDRRRFVSQETGNLYIAKVEPWDVGNYTCVVTNSKAGQSVQGPPTPLTLR 242
Query: 178 -------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ P + P A +++L C A + ++++ + ++ ++
Sbjct: 243 SDGVMGEYEPKIEARFPETTYAAKGSSVKLECFALGNPVPNISWRRSDGSSLTKKIERDK 302
Query: 231 LETPNINIDGGLLEITNASFA----DAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ G+LEI + D G YEC+ ++ G+ + + V P
Sbjct: 303 --------NKGVLEIPDVQQXVQQEDEGSYECIAENIRGRNIARGQLFVYALP 347
>gi|402859564|ref|XP_003894224.1| PREDICTED: contactin-6 [Papio anubis]
Length = 1045
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 236/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I + L I LN D +YQ
Sbjct: 350 NLLWKCKASGKPNPWYTWLKNGERLNPE-------ERIQIDNGTLIITMLNVS-DSGVYQ 401
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ ++ GG++ I C P A P+ WK+
Sbjct: 402 CAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR 461
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G ++ G LIV +
Sbjct: 462 GTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVKER-TVITV 520
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 521 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII---DLKKGIAHFERIGGESVGD 577
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P V+V E+ T++ + W G
Sbjct: 578 LMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAG 637
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 638 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 692
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 693 AGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGGSRSELVITWESIPEELQNGEGFGY 752
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 753 IVMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 811
Query: 483 W 483
+
Sbjct: 812 Y 812
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 58 SKSEVILKCAANGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAISSPHTDQDIG 112
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 113 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 167
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 168 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 227
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 228 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 287
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 288 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 334
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 441 GDIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSY 493
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 494 TCIATNQFGTAKNAGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 545
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G+II FE G+L+I + + SG Y CT +
Sbjct: 546 EVVFVWFFNGDIIDLKKGIAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAV 605
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 606 ADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 665
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V P
Sbjct: 666 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVN 722
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y ++ R ++TW E V E
Sbjct: 723 INGGGG----SRSELVITWESIPEELQNGEGF-GYIVMFRPVGSTTW--TKEKVASVESS 775
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 776 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQS 829
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 830 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 887
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 888 NTIYFASVRAYNTAGTGPSSPPVNV 912
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 168 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 221
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 222 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 280
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 281 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 337
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL +C A + + Y W NG R LN E I ID G L
Sbjct: 338 QKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLKNGER-----LNPEE--RIQIDNGTLI 388
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 389 ITMLNVSDSGVYQCAAEN 406
>gi|403270430|ref|XP_003927185.1| PREDICTED: contactin-6 [Saimiri boliviensis boliviensis]
Length = 1029
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 235/480 (48%), Gaps = 21/480 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQC
Sbjct: 335 LLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + Y++A+LRVL P F K P++ ++ GG++ I C P A P+ WK+
Sbjct: 387 AAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKRG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + E+G+L I V+R D+G Y+C ATN G ++ G LIV +
Sbjct: 447 METLRQSKRIFLLEDGSLKIYNVTRSDAGSYTCMATNQFGTAKNTGSLIVKER-TVITIP 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 243
P K+ + ++ L C + ++V +IW NG I DL + I G G L
Sbjct: 506 PSKMDVTVGESIVLPCQVSHDPSIEVVFIWFFNGDVI---DLKKGVAHFERIGGESVGDL 562
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C V++T+ +S +IV GPPG P V+V ++ T++ + W G
Sbjct: 563 MIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVEDISSTTSQLSWRPGP 622
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI + I RT ++ W + + G+ + L PW YEF+V+A
Sbjct: 623 DNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVVA 677
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
GN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 678 GNSIGIGEPSKPSELLRTKASVPVVAPININGGGGSRSELVITWESIPEELQNGEGFGYI 737
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ +R T + E + V R S + +EVKV ND G G S V ++
Sbjct: 738 VMFRPVGSTTWTKEKVAS-AESSRFVYRNESIIPLSPFEVKVGVYNDEGEGSLSTVTIVY 796
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 188/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIECKPNAFPRAAISWKRGMETLR------QSKRIFLLEDGSLKI-YNVTRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCMATNQFGTAKNTGSLIVKERTVITIPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ F+W +G++I FE G+L+I + + SG Y CT +
Sbjct: 530 EVVFIWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVKVEDISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPIN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y ++ R ++TW E V E
Sbjct: 707 INGGGG----SRSELVITWESIPEELQNGEGF-GYIVMFRPVGSTTW--TKEKVASAESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N+ G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNDEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GN I I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVTGN--ITTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRW 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K + +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKTQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + +L C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDSLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 109/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y ++ L I + ++
Sbjct: 42 SKSEIILNCAANGHPSPHYRWKQNGTDID-----FTVSYHYRLEGGSLAISSPHTDQVIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
YQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 TYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRWDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKTQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
>gi|332815945|ref|XP_003309633.1| PREDICTED: contactin-6 [Pan troglodytes]
Length = 1019
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 325 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 376
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P P+ WK+
Sbjct: 377 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKR 436
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 437 GTETLRQSKRVFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 495
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 496 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 552
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 553 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 612
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 613 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 667
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 668 AGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGY 727
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 728 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 786
Query: 483 W 483
+
Sbjct: 787 Y 787
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 187/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ G P SW R E L + + + ++D L I Y D Y
Sbjct: 416 GDIVIGCKPNGFPRAAISWKRGTETLR------QSKRVFLLEDGSLKI-YNITRSDAGSY 468
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 469 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 520
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 521 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 580
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 581 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 640
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 641 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVN 697
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 698 IHGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 750
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 751 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 804
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 805 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 862
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 863 NTIYFASVRAYNTAGTGPSSPPVNV 887
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 33 SKSEVVLNCAANGYPSPRYRWKQNGTDID-----FTMSYHYRLDGGSLAINSPHTDQDIG 87
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 88 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 142
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 143 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 202
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 203 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 262
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 263 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 309
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 143 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 196
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 197 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 255
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 256 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 312
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 313 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 363
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 364 ITMLNVSDSGVYQCAAEN 381
>gi|351706113|gb|EHB09032.1| Contactin-6 [Heterocephalus glaber]
Length = 980
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 241/481 (50%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LNSE +R I++ LTI LN D +YQ
Sbjct: 285 NLYWECKASGKPNPWYTWLKNGERLNSE-------ERIQIENGTLTITILNVS-DSGVYQ 336
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ + GG+++I C P A P+ WK+
Sbjct: 337 CAAENKYQIIYANAELRVLASAPDFSKSPIKKISIVQIGGDISIECKPNAFPRAAISWKR 396
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G+ ++ G LIV +
Sbjct: 397 GSESLRQSKRVFLLEDGSLKIHNVTRSDAGPYTCIATNQFGIAKNTGSLIVKER-TIITV 455
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V + W+ NG I DL + I G G
Sbjct: 456 PPSKMDVTVGESIVLPCQVSHDPSIEVVFAWSFNGNII---DLQKQVAHFEKIGGESVGD 512
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N + +G+Y C V++T+ ++S +IV GPPG P V+V + T++ I W G
Sbjct: 513 LMIRNIQLSHSGKYLCTVRTTLERLSAVADIIVRGPPGPPEDVRVEHISSTTSQISWRPG 572
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + + RT ++ W + + G+ + L W YEF+V+
Sbjct: 573 PDNNSPIQIFTVQTRTPFSVGW-----QAVATVPEILNGQTYNATVVGLSSWVEYEFRVV 627
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 628 AGNSIGIGEPSKPSKLLRTKASVPVLAPVNINGGGGGRYELVITWESIPEELQNGEGFGY 687
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + V R S + +EVKV N+ G GP S V +
Sbjct: 688 IVMFRPVGSTAWTKERVPLVESSKF-VYRNESIMPLSPFEVKVGVYNNEGEGPLSTVSIV 746
Query: 483 W 483
+
Sbjct: 747 Y 747
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 34/259 (13%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 103 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFVTNKEAQR 156
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
L + P + R E+ A + +V + C P P W++
Sbjct: 157 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRR- 214
Query: 127 GNIIGSGGRRKIFENGN---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+ GS RKI + + L I ++D G Y C A N+ G + +KG+LI + P +
Sbjct: 215 --LDGSPLPRKIKYSKSQAILEIPNFQQEDEGFYECLAGNLRGRNLAKGQLI-FYAPPEW 271
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E ++ + NL C A + + Y W NG R+ + + I I+ G L
Sbjct: 272 EHKIQNTYLSIYDNLYWECKASGKP--NPWYTWLKNGERLNSEE-------RIQIENGTL 322
Query: 244 EITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 323 TITILNVSDSGVYQCAAEN 341
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 107/500 (21%), Positives = 182/500 (36%), Gaps = 50/500 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P SW R E L + + + ++D L I + D Y
Sbjct: 376 GDISIECKPNAFPRAAISWKRGSESLR------QSKRVFLLEDGSLKIHNVT-RSDAGPY 428
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ ++ L ++ + P + + GE ++ + C P + F
Sbjct: 429 TCIATNQFGIAKNTGSL-IVKERTIITVPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFA 485
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +GNII + FE G+L+I + SG Y CT + +IV
Sbjct: 486 WSFNGNIIDLQKQVAHFEKIGGESVGDLMIRNIQLSHSGKYLCTVRTTLERLSAVADIIV 545
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + + + R + + + T +G + + P I
Sbjct: 546 RGPPGPPEDVRVEHISSTTSQISWRPGPDNNSPIQIFTVQTRTPFSVGWQAVATV--PEI 603
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V +++G + TK +V V P + GG
Sbjct: 604 -LNGQTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSKLLRTKASVPVLAPVNINGGG 662
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+ I W + NG Y ++ R ++ W E V E ++ R
Sbjct: 663 G----GRYELVITWESIPEELQNGEGFG-YIVMFRPVGSTAW--TKERVPLVESSKFVYR 715
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E+ ++P S +E KV N G G S+ S Y+ D+P AP +
Sbjct: 716 NES-----IMPLSPFEVKVGVYNNEGEGPLSTVSIVYSG-EDEPQLAPRGTSLQSFSASE 769
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW + + + Y++ + + E ++ GNV I T Y
Sbjct: 770 MEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESIIGKIRVSGNV--TNKSITGLKANTVYF 827
Query: 463 VKVQAINDVGPGPESEVVTI 482
V+A N G GP S V +
Sbjct: 828 ASVRAYNTAGTGPSSLPVNV 847
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 20/151 (13%)
Query: 140 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPK 189
E GNL I+ V D G Y+C TN +G L + P + P
Sbjct: 128 ETGNLYIAKVEPSDVGNYTCFVTNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPET 187
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNA 248
I A +++L C A + D+++ +D + L + +LEI N
Sbjct: 188 IQAAKDSSVKLECFALGNPVPDISW---------RRLDGSPLPRKIKYSKSQAILEIPNF 238
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
D G YEC+ + G+ K +I PP
Sbjct: 239 QQEDEGFYECLAGNLRGRNLAKGQLIFYAPP 269
>gi|114585170|ref|XP_516244.2| PREDICTED: contactin-6 isoform 2 [Pan troglodytes]
Length = 1028
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 446 GTETLRQSKRVFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 562 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 187/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ G P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIGCKPNGFPRAAISWKRGTETLR------QSKRVFLLEDGSLKI-YNITRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 530 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 IHGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEVVLNCAANGYPSPRYRWKQNGTDID-----FTMSYHYRLDGGSLAINSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>gi|363738791|ref|XP_425170.3| PREDICTED: contactin-6 [Gallus gallus]
Length = 1054
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 236/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P +YSW +NG+ PL ++R +++ L I LN D +YQ
Sbjct: 360 SLFWECKAKGKPTPSYSWLKNGQ-------PLMSEERIQVENGTLIIPMLN-MSDSGLYQ 411
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ T Y+SA+LRV+ P F K P++ + GG VTI C P A+P+ W+K
Sbjct: 412 CVAENKYDTIYASAELRVIAAAPDFSKNPVKKTSIVQVGGEVTIGCRPSASPRAAIDWRK 471
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
++ R + E+G+L + +++ D+G+Y+C ATN G+ + G LIV +
Sbjct: 472 GPEVLRLNKRALLLEDGSLRLYNITKSDAGVYTCIATNQFGVARNSGNLIVKER-TVITI 530
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P + + ++ L C + + VA+ W+ +G +I D I G G
Sbjct: 531 APSNMDVTVGESIVLPCQVSHDPSIAVAFTWSFSGNQI---DFKRGMPHFERIGGESVGD 587
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C+V++T+ ST +IV GPPG P V+V + T+A + W G
Sbjct: 588 LMIRNIQLHHSGKYVCMVQTTLDSQSTAVDIIVRGPPGPPEDVRVEHISSTTAVLSWKSG 647
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N P+ Y I RT ++ W VS + GR + L PW YEF+V+
Sbjct: 648 KDNNSPVQIYSIQTRTPFSVGWQAVS-----TVPEVLNGRTHKATVVDLSPWVEYEFRVV 702
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS T A P AP+ + GGGG +L I+WEP+P E QN Y
Sbjct: 703 ARNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGGSRSELVITWEPVPEELQNGEGFGY 762
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + + V R S + +EVKV N+ G G S + +
Sbjct: 763 IIMFRPLGSTTWTKAAVAPI-EASKYVYRNESITPLSPFEVKVGVYNNEGEGTLSSISIV 821
Query: 483 W 483
+
Sbjct: 822 Y 822
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 38/277 (13%)
Query: 19 VTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTRY 76
++++W N+ TL +++ R F+ L I + P D Y C N R
Sbjct: 179 LSFAW-----TFNNNTLYVQEDRRRFVSQETGNLYIAKVEP-WDVGNYTCVVTNSKAGRS 232
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
LTL+ P + R E+ TYA +G + + C P P W++ D
Sbjct: 233 VQGPPTPLTLRSDGVMGEYEPKIEARFPET-TYAAKGSSAKLECFALGNPVPSISWRRSD 291
Query: 127 GNIIGSGGRRKIFENGN---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
GN + +KI + N L I V ++D G Y C A N+ G + ++G+L V P +
Sbjct: 292 GNSL----TKKIKHDKNKGVLEIPDVQQEDGGSYECIAENIRGRNIARGQLFVYALPEWD 347
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+++ ++ + +L C A + +Y W NG + + I ++ G L
Sbjct: 348 KKIENAF-LSLYDSLFWECKAKGKP--TPSYSWLKNGQPL-------MSEERIQVENGTL 397
Query: 244 EITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
I + +D+G Y+CV ++ I S + VI P
Sbjct: 398 IIPMLNMSDSGLYQCVAENKYDTIYASAELRVIAAAP 434
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 184/508 (36%), Gaps = 66/508 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELL--NSETLPLEDQDRYFIQDNVLTIRYLN-PERDP 61
++T C P W + E+L N L LED ++R N + D
Sbjct: 451 GEVTIGCRPSASPRAAIDWRKGPEVLRLNKRALLLEDG----------SLRLYNITKSDA 500
Query: 62 AMYQCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
+Y C A NQ +S L V+T+ PS + GE ++ + C
Sbjct: 501 GVYTCIATNQFGVARNSGNLIVKERTVITIAPS------NMDVTVGE--SIVLPCQVSHD 552
Query: 117 PK--PKFVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMD 168
P F W GN I FE G+L+I + SG Y C
Sbjct: 553 PSIAVAFTWSFSGNQIDFKRGMPHFERIGGESVGDLMIRNIQLHHSGKYVCMVQTTLDSQ 612
Query: 169 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ +IV P E + + + L + + + I T +G +
Sbjct: 613 STAVDIIVRGPPGPPEDVRVEHISSTTAVLSWKSGKDNNSPVQIYSIQTRTPFSVGWQAV 672
Query: 229 NELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVGK---------ISTKTTVIVEG 277
+ + P + ++G + T + EYE V +++VG + TK V
Sbjct: 673 STV--PEV-LNGRTHKATVVDLSPWVEYEFRVVARNSVGTGEPSKPSALLKTKAAVPTVA 729
Query: 278 PPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
P + GG ++ I W + NG Y I+ R ++TW + I
Sbjct: 730 PTNVSGGGG----SRSELVITWEPVPEELQNGEGF-GYIIMFRPLGSTTWTKAAVAPI-- 782
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
E +Y R E+ + P S +E KV N G G SS S Y D+P AP+
Sbjct: 783 EASKYVYRNES-----ITPLSPFEVKVGVYNNEGEGTLSSISIVY-AGEDEPQIAPAGTS 836
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
++ +SW+P+ + + Y++ + + E + ++ GNV I
Sbjct: 837 ALSISAAEVEVSWQPVAWNRHTGRVLGYEVLYWTDDPKESTAGKVRVNGNV--TAKNITG 894
Query: 455 EFYYTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 895 LKANTVYFATVRAYNTAGTGPSSAPVNV 922
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 110/286 (38%), Gaps = 34/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P +Y W +NG ++ L Y + L I ++D YQC A N
Sbjct: 76 CTAKGYPLPSYRWKQNGTDID-----LTMSYHYRLVGGSLAINNPRKKQDIGTYQCLATN 130
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGN 128
T S A+L+ L+ +F+ + S EG V + C P F W + N
Sbjct: 131 SFGTILSRKAKLQFAYLE-NFEMK-TRSTVSVREGQGVVLLCGPPPHHGGLSFAWTFNNN 188
Query: 129 IIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-------- 177
+ R+ F E GNL I+ V D G Y+C TN +G L
Sbjct: 189 TLYVQEDRRRFVSQETGNLYIAKVEPWDVGNYTCVVTNSKAGRSVQGPPTPLTLRSDGVM 248
Query: 178 --HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
+ P + P A + +L C A + ++ W + D N L T
Sbjct: 249 GEYEPKIEARFPETTYAAKGSSAKLECFALGNPVPSIS--WRRS-------DGNSL-TKK 298
Query: 236 INIDG--GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I D G+LEI + D G YEC+ ++ G+ + + V P
Sbjct: 299 IKHDKNKGVLEIPDVQQEDGGSYECIAENIRGRNIARGQLFVYALP 344
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 164
V + C + P P + WK++G I + G+L I +P + D G Y C ATN
Sbjct: 72 VLLNCTAKGYPLPSYRWKQNGTDIDLTMSYHYRLVGGSLAINNPRKKQDIGTYQCLATNS 131
Query: 165 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G S K +L + ++ + +++ + + L C +++ WT N
Sbjct: 132 FGTILSRKAKLQFAYLENFEMKTRSTVSVREGQGVVLLCGPPPHH-GGLSFAWTFNN--- 187
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ + E ++ + G L I D G Y CVV ++K V+GPP
Sbjct: 188 NTLYVQEDRRRFVSQETGNLYIAKVEPWDVGNYTCVV------TNSKAGRSVQGPP 237
>gi|332815947|ref|XP_001137194.2| PREDICTED: contactin-6 isoform 1 [Pan troglodytes]
Length = 956
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 262 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 313
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P P+ WK+
Sbjct: 314 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKR 373
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 374 GTETLRQSKRVFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 432
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 433 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 489
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 490 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 549
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 550 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 604
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 605 AGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGY 664
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 665 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 723
Query: 483 W 483
+
Sbjct: 724 Y 724
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 187/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ G P SW R E L + + + ++D L I Y D Y
Sbjct: 353 GDIVIGCKPNGFPRAAISWKRGTETLR------QSKRVFLLEDGSLKI-YNITRSDAGSY 405
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 406 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 457
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 458 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 517
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 518 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 577
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 578 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVN 634
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 635 IHGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 687
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 688 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 741
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 742 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 799
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 800 NTIYFASVRAYNTAGTGPSSPPVNV 824
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 80 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 133
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 134 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 192
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 193 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 249
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 250 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 300
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 301 ITMLNVSDSGVYQCAAEN 318
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 94/256 (36%), Gaps = 31/256 (12%)
Query: 42 RYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 101
Y + L I + ++D MYQC A N L T S F+ + S
Sbjct: 4 HYRLDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSV 62
Query: 102 GEGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDD 153
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 63 REGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSD 118
Query: 154 SGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCS 203
G Y+C TN +G L + P + P I A +++L C
Sbjct: 119 VGNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECF 178
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A + D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 179 ALGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNL 230
Query: 264 VGKISTKTTVIVEGPP 279
G+ K +I PP
Sbjct: 231 RGRNLAKGQLIFYAPP 246
>gi|395824571|ref|XP_003785536.1| PREDICTED: contactin-6 [Otolemur garnettii]
Length = 1029
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 236/480 (49%), Gaps = 21/480 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G P+ Y WF+NGE LN E +R I++ L I LN D +YQC
Sbjct: 335 LLWECKASGKPNPWYMWFKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + Y++A+LRVL P F K P++ + GGN+ I C P A P+ WK+
Sbjct: 387 AAENKYQIIYANAELRVLASAPDFSKTPIKKNSVVQVGGNIVIECKPNAFPRAAISWKRG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + E+G+L I V+R D G Y+C ATN G+ ++ G LIV +
Sbjct: 447 AENLRQSRRVFLLEDGSLKIYNVTRSDGGSYTCIATNQFGIAKNTGSLIVKER-TVITVP 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 243
P ++ + ++ L C + ++V ++W+ NG I DL + I G G L
Sbjct: 506 PSRMDVTVGESIVLPCQVSHDPTIEVIFVWSFNGDVI---DLKKGVAHFERIGGESVGDL 562
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C V++T+ +S +IV GPPG P V+V + T++ + W G
Sbjct: 563 MIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVDHISSTTSQLSWRPGP 622
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI + I RT ++ W + + +G+ + L PW YEF+V+A
Sbjct: 623 NNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILSGKTYNATVVGLSPWVEYEFRVVA 677
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
GN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 678 GNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGGSRSELVITWESIPEELQNGEGFGYV 737
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ +R T + E + + V R S + +EVKV N+ G G S V ++
Sbjct: 738 VMFRPVGSTTWNKEKVASVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGALSTVSIVY 796
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 183/502 (36%), Gaps = 66/502 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW R E L + + + ++D L I Y D Y C A N
Sbjct: 431 CKPNAFPRAAISWKRGAENLR------QSRRVFLLEDGSLKI-YNVTRSDGGSYTCIATN 483
Query: 71 QLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 123
Q ++ L V+T+ PS + GE ++ + C P + FVW
Sbjct: 484 QFGIAKNTGSLIVKERTVITVPPS------RMDVTVGE--SIVLPCQVSHDPTIEVIFVW 535
Query: 124 KKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+G++I FE G+L+I + + SG Y CT + +IV
Sbjct: 536 SFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVR 595
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P E + + L R + + + I T +G + + P I
Sbjct: 596 GPPGPPEDVKVDHISSTTSQLSWRPGPNNNSPIQIFTIQTRTPFSVGWQAVATV--PEI- 652
Query: 238 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 286
+ G T + EYE V +++G + TK +V V P + GG
Sbjct: 653 LSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGG 712
Query: 287 VVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 340
++ I W + NG + ++ + T WN E V E R+
Sbjct: 713 ----SRSELVITWESIPEELQNGEGFGYVVMFRPVGSTTWNK------EKVASVESSRFV 762
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
R E+ ++P S +E KV N G G S+ S Y+ D+P AP +I
Sbjct: 763 YRNES-----IIPLSPFEVKVGVYNNEGEGALSTVSIVYSG-EDEPQLAPRKISVQSFSA 816
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460
++ +SW + + + Y++ + + E ++ GNV I T
Sbjct: 817 SEMEVSWNAIAWNRNTGRVLGYEVLYWTDDARESMIGKIRVSGNV--TTKNITGLKANTI 874
Query: 461 YEVKVQAINDVGPGPESEVVTI 482
Y V+A N G GP S V +
Sbjct: 875 YFASVRAYNTAGTGPSSPPVNV 896
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 108/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEIILNCAANGYPSPHYRWKQNGTDID-----FSMSYHYRLDGGSLVISSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
YQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 TYQCLATNLLGTVLSRKAKLQFAYIDDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + + F E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLHVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRADGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 318
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 130/319 (40%), Gaps = 48/319 (15%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLHVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRADGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + +L C A + + Y+W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDSLLWECKASGKP--NPWYMWFKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP------------GGVQVVEVH 291
IT + +D+G Y+C ++ I + ++ P GG V+E
Sbjct: 373 ITMLNVSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKTPIKKNSVVQVGGNIVIECK 432
Query: 292 KTS---ATIQWTDGATNGR 307
+ A I W GA N R
Sbjct: 433 PNAFPRAAISWKRGAENLR 451
>gi|449269777|gb|EMC80528.1| Contactin-5, partial [Columba livia]
Length = 985
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C+A G P TY W +NG +PL Q R + + VL I +N D
Sbjct: 286 LDSGDQLRWECKATGKPRPTYRWLKNG-------VPLWPQSRIEMVNGVLMIHSVNLS-D 337
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ T Y+SA+L++L P+F + +G V I C P+A+PKP
Sbjct: 338 AGMYQCLAENKYGTIYASAELKILASAPTFPLNQMRKTIIVTKGQEVVIECKPQASPKPT 397
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E + V P
Sbjct: 398 ITWKKGDKALRENKRITILPHGSLRILNASKSDEGRYLCQGVNVFGSAEIIASVSVKE-P 456
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P KI + ++ L C A + LDV + WT NG I + E+
Sbjct: 457 TRMELTPKKIELMVGESVVLSCKALHDSTLDVTFYWTLNGQPIDFEKEGGHFESIKAQAS 516
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++ +S +T ++V GPPG PG V V E+ T+AT+ W
Sbjct: 517 SADLMIRNILLTHAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIVEEITDTTATLSW 576
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ GA N PI+ Y + AR+ ++ W + + +G E+++ L PW YEF
Sbjct: 577 SPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPEVISGDMESAMAVELNPWVEYEF 631
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G G+PS+PS T P P+ + G G+ +L I+WEP+ E QN
Sbjct: 632 RVVATNKIGTGDPSAPSRVIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEG 691
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S +
Sbjct: 692 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPI 750
Query: 480 VTI 482
V I
Sbjct: 751 VVI 753
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 61/281 (21%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C+A G P TY W RNG ++ +E R+ + + L I+ + +D
Sbjct: 25 EKKVSLNCQARGNPTPTYRWLRNGTEID-----IESDYRFSLIEGSLIIKDPSEMKDSGQ 79
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC N T S R L+ + + LESE G+ I+ +V+
Sbjct: 80 YQCLTSNMFGTILS----REAVLQFACECSVLESE------GSEIIY---------SWVF 120
Query: 124 KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ + + RR I E GNL IS V D G Y C N + R++
Sbjct: 121 NEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV----TNARVLS------ 170
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-------- 234
PP T RN ++ T+ ++ Y++ + ++ NM+ L P
Sbjct: 171 ----PP--TPLTLRNDGIQNDDMTK---NIQYLYRLHLLKGVNMECFALGNPVPTISWRK 221
Query: 235 ---------NINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ +LEI N DAG YEC +++ G+
Sbjct: 222 VNGHNPSKARLRKSQAVLEIPNVQLEDAGVYECKAENSRGR 262
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 14/178 (7%)
Query: 107 VTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 165
V + C P P W+K +G+ RK L I V +D+G+Y C A N
Sbjct: 203 VNMECFALGNPVPTISWRKVNGHNPSKARLRK--SQAVLEIPNVQLEDAGVYECKAENSR 260
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
G + +G+L V P + E+L + + L+ C A + Y W NGV +
Sbjct: 261 GRNVFRGQLQVYTYPHWVEKL-NDTQLDSGDQLRWECKATGKP--RPTYRWLKNGVPLWP 317
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 282
I + G+L I + + +DAG Y+C+ ++ G I + I+ P P
Sbjct: 318 QS-------RIEMVNGVLMIHSVNLSDAGMYQCLAENKYGTIYASAELKILASAPTFP 368
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 61/164 (37%), Gaps = 26/164 (15%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 160
E V++ C P P + W ++G I S R + E ++ P DSG Y C
Sbjct: 24 EEKKVSLNCQARGNPTPTYRWLRNGTEIDIESDYRFSLIEGSLIIKDPSEMKDSGQYQCL 83
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
+N+ G S+ ++ CS E ++ Y W N
Sbjct: 84 TSNMFGTILSREAVL---------------------QFACECSVLESEGSEIIYSWVFNE 122
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 123 F---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 163
>gi|109035936|ref|XP_001101588.1| PREDICTED: contactin-6 isoform 1 [Macaca mulatta]
Length = 1024
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 329 NLLWKCKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 380
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ ++ GG++ I C P A P+ WK+
Sbjct: 381 CAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR 440
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G ++ G LIV +
Sbjct: 441 GTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVKER-TVITV 499
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 500 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII---DLKKGMAHFERIGGESVGD 556
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P V+V E+ T++ + W G
Sbjct: 557 LMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAG 616
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I +T ++ W + + G+ + L PW YEF+V+
Sbjct: 617 PDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 671
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP + GGGG +L I+WE +P E QN Y
Sbjct: 672 AGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEELQNGEGFGY 731
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 732 IIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 790
Query: 483 W 483
+
Sbjct: 791 Y 791
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 420 GDIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSY 472
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 473 TCIATNQFGTAKNAGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 524
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G+II FE G+L+I + + SG Y CT +
Sbjct: 525 EVVFVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAV 584
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 585 ADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGWQAVATV 644
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V P
Sbjct: 645 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVN 701
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 702 VNGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVASVESS 754
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 755 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQS 808
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 809 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 866
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 867 NTIYFASVRAYNTAGTGPSSPPVNV 891
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 37 SKSEVILKCAANGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAISSPHTDQDIG 91
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 92 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 146
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 147 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 206
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 207 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 266
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 267 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 313
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 147 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 200
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 201 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 259
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 260 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 316
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL +C A + + Y W NG R LN E I I+ G L
Sbjct: 317 QKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 367
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 368 ITMLNVSDSGVYQCAAEN 385
>gi|148666976|gb|EDK99392.1| contactin 6, isoform CRA_b [Mus musculus]
Length = 1033
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ +Y+W +NG+ LN+E +R I++ L I LN D +YQ
Sbjct: 339 SLFWECKASGNPNPSYTWLKNGQRLNTE-------ERIQIENGTLIITMLNIS-DSGIYQ 390
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRVL P F K P++ + GG+++I C P A PK WK+
Sbjct: 391 CAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKR 450
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R E+G+L I V+R D+G Y+C ATN G +S G L+V +
Sbjct: 451 GTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKER-TIITV 509
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 510 PPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII---DLKKGVAHFERIGGESVGD 566
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W G
Sbjct: 567 LMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPG 626
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 627 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGQTYNATVVGLSPWVEYEFRVV 681
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 682 AGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGY 741
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + + R S + +EVKV N+ G G S V +
Sbjct: 742 IVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIV 800
Query: 483 W 483
+
Sbjct: 801 Y 801
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
+++Y+W N L +++ R F+ + + + E D Y C N+ R
Sbjct: 157 ELSYAW-----TFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS 211
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L L+ P + R E+ A + ++ + C P P W++ D
Sbjct: 212 VQGPPTPLVLRTDGVMGEYEPKIEVRFPET-IQAAKDSSIKLECFALGNPVPDISWRRLD 270
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G+ + G+ K ++ +L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 271 GSPMP--GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQ 327
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + +Y W NG R+ + I I+ G L I
Sbjct: 328 KIQNTYLSIYDSLFWECKASGNP--NPSYTWLKNGQRLNTEE-------RIQIENGTLII 378
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 379 TMLNISDSGIYQCAAEN 395
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 182/503 (36%), Gaps = 56/503 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + F++D L I + D Y
Sbjct: 430 GDISIECKPNAFPKASISWKRGTENLK------QSKRVLFLEDGSLKICNVT-RADAGSY 482
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ SS L V+ + P + + GE ++ + C P + FV
Sbjct: 483 TCVATNQFGNGKSSGGL-VVKERTIITVPPSKMDVTVGE--SIVLPCQVSHDPTMEVLFV 539
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G+II FE G+L+I + SG Y CT + +IV
Sbjct: 540 WYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 599
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + + L R + + I T +G + + P I
Sbjct: 600 RGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI 657
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V + +G + TK +V P PG +
Sbjct: 658 -LNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASV----PNVAPGNI 712
Query: 286 QVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 339
++ I W + NG I ++ + T W + E V E ++
Sbjct: 713 NGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW------MKERVALVESSKF 766
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 767 IYRNES-----IMPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFS 820
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
++ +SW + + + Y++ + N E ++ GNV I T
Sbjct: 821 ASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRANT 878
Query: 460 EYEVKVQAINDVGPGPESEVVTI 482
Y V+A N G GP S V +
Sbjct: 879 IYFASVRAYNTAGTGPSSPPVNV 901
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 109/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ TC A G P Y W +NG ++ Y + L I ++D
Sbjct: 47 SRSEIILTCTANGYPSPHYRWKQNGTDID-----FGMTYHYRLDGGSLAISSPRTDQDIG 101
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
+YQC A N + T S F+ + S EG V + C P P F
Sbjct: 102 IYQCLATNPVGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 156
Query: 122 ----VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG-- 172
W D + +R+ + GNL + V D G Y+C TN +G
Sbjct: 157 ELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPP 216
Query: 173 RLIVL--------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+VL + P + P I A +++L C A + D+++ G
Sbjct: 217 TPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPDISWRRLDGSPMPG 276
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI D G YEC+ + G+ K +I PP
Sbjct: 277 KIKYSKSQ--------AILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 323
>gi|7209914|dbj|BAA92367.1| neural recognition molecule NB-3 [Mus musculus]
Length = 1028
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ +Y+W +NG+ LN+E +R I++ L I LN D +YQ
Sbjct: 334 SLFWECKASGNPNPSYTWLKNGQRLNTE-------ERIQIENGTLIITMLNIS-DSGIYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRVL P F K P++ + GG+++I C P A PK WK+
Sbjct: 386 CAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R E+G+L I V+R D+G Y+C ATN G +S G L+V +
Sbjct: 446 GTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKER-TIITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGQTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + + R S + +EVKV N+ G G S V +
Sbjct: 737 IVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
+++Y+W N L +++ R F+ + + + E D Y C N+ R
Sbjct: 152 ELSYAW-----TFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS 206
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L L+ P + R E+ A + ++ + C P P W++ D
Sbjct: 207 VQGPPTPLVLRTDGVMGEYEPKIEVRFPET-IQAAKDSSIKLECFALGNPVPDISWRRLD 265
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G+ + G+ K ++ +L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 266 GSPMP--GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQ 322
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + +Y W NG R+ + I I+ G L I
Sbjct: 323 KIQNTYLSIYDSLFWECKASGNP--NPSYTWLKNGQRLNTEE-------RIQIENGTLII 373
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 374 TMLNISDSGIYQCAAEN 390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 182/503 (36%), Gaps = 56/503 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + F++D L I + D Y
Sbjct: 425 GDISIECKPNAFPKASISWKRGTENLK------QSKRVLFLEDGSLKICNVT-RADAGSY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ SS L V+ + P + + GE ++ + C P + FV
Sbjct: 478 TCVATNQFGNGKSSGGL-VVKERTIITVPPSKMDVTVGE--SIVLPCQVSHDPTMEVLFV 534
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G+II FE G+L+I + SG Y CT + +IV
Sbjct: 535 WYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + + L R + + I T +G + + P I
Sbjct: 595 RGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI 652
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V + +G + TK +V P PG +
Sbjct: 653 -LNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASV----PNVAPGNI 707
Query: 286 QVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 339
++ I W + NG I ++ + T W + E V E ++
Sbjct: 708 NGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW------MKERVALVESSKF 761
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 762 IYRNES-----IMPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFS 815
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
++ +SW + + + Y++ + N E ++ GNV I T
Sbjct: 816 ASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRANT 873
Query: 460 EYEVKVQAINDVGPGPESEVVTI 482
Y V+A N G GP S V +
Sbjct: 874 IYFASVRAYNTAGTGPSSPPVNV 896
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 28/291 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ TC A G P Y W +NG ++ Y + L I ++D
Sbjct: 42 SRSEIILTCTANGYPSPHYRWKQNGTDID-----FGMTYHYRLDGGSLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKF 121
+YQC A N + T S F+ + S EG V + C P + +
Sbjct: 97 IYQCLATNPVGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLCGPPPHFGELSY 155
Query: 122 VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIV 176
W D + +R+ + GNL + V D G Y+C TN +G +V
Sbjct: 156 AWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLV 215
Query: 177 L--------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + P + P I A +++L C A + D+++ G +
Sbjct: 216 LRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPDISWRRLDGSPMPGKIKY 275
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ + +LEI D G YEC+ + G+ K +I PP
Sbjct: 276 SKSQ--------AILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 318
>gi|31980846|ref|NP_059079.2| contactin-6 precursor [Mus musculus]
gi|55976601|sp|Q9JMB8.2|CNTN6_MOUSE RecName: Full=Contactin-6; AltName: Full=Neural recognition
molecule NB-3; Short=mNB-3; Flags: Precursor
gi|26343141|dbj|BAC35227.1| unnamed protein product [Mus musculus]
gi|49903291|gb|AAH76594.1| Contactin 6 [Mus musculus]
Length = 1028
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ +Y+W +NG+ LN+E +R I++ L I LN D +YQ
Sbjct: 334 SLFWECKASGNPNPSYTWLKNGQRLNTE-------ERIQIENGTLIITMLNIS-DSGIYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRVL P F K P++ + GG+++I C P A PK WK+
Sbjct: 386 CAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R E+G+L I V+R D+G Y+C ATN G +S G L+V +
Sbjct: 446 GTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKER-TIITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGQTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + + R S + +EVKV N+ G G S V +
Sbjct: 737 IVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
+++Y+W N L +++ R F+ + + + E D Y C N+ R
Sbjct: 152 ELSYAW-----TFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS 206
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L L+ P + R E+ A + ++ + C P P WK+ D
Sbjct: 207 VQGPPTPLVLRTDGVMGEYEPKIEVRFPET-IQAAKDSSIKLECFALGNPVPDISWKRLD 265
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G+ + G+ K ++ +L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 266 GSPMP--GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQ 322
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + +Y W NG R+ + I I+ G L I
Sbjct: 323 KIQNTYLSIYDSLFWECKASGNP--NPSYTWLKNGQRLNTEE-------RIQIENGTLII 373
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 374 TMLNISDSGIYQCAAEN 390
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 182/503 (36%), Gaps = 56/503 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + F++D L I + D Y
Sbjct: 425 GDISIECKPNAFPKASISWKRGTENLK------QSKRVLFLEDGSLKICNVT-RADAGSY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ SS L V+ + P + + GE ++ + C P + FV
Sbjct: 478 TCVATNQFGNGKSSGGL-VVKERTIITVPPSKMDVTVGE--SIVLPCQVSHDPTMEVLFV 534
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G+II FE G+L+I + SG Y CT + +IV
Sbjct: 535 WYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + + L R + + I T +G + + P I
Sbjct: 595 RGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI 652
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V + +G + TK +V P PG +
Sbjct: 653 -LNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASV----PNVAPGNI 707
Query: 286 QVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 339
++ I W + NG I ++ + T W + E V E ++
Sbjct: 708 NGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW------MKERVALVESSKF 761
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 762 IYRNES-----IMPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFS 815
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
++ +SW + + + Y++ + N E ++ GNV I T
Sbjct: 816 ASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRANT 873
Query: 460 EYEVKVQAINDVGPGPESEVVTI 482
Y V+A N G GP S V +
Sbjct: 874 IYFASVRAYNTAGTGPSSLPVNV 896
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 28/291 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ TC A G P Y W +NG ++ Y + L I ++D
Sbjct: 42 SRSEIILTCTANGYPSPHYRWKQNGTDID-----FGMTYHYRLDGGSLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKF 121
+YQC A N + T S F+ + S EG V + C P + +
Sbjct: 97 IYQCLATNPVGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLCGPPPHFGELSY 155
Query: 122 VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIV 176
W D + +R+ + GNL + V D G Y+C TN +G +V
Sbjct: 156 AWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLV 215
Query: 177 L--------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + P + P I A +++L C A + D+++ G +
Sbjct: 216 LRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPDISWKRLDGSPMPGKIKY 275
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ + +LEI D G YEC+ + G+ K +I PP
Sbjct: 276 SKSQ--------AILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 318
>gi|355746564|gb|EHH51178.1| Neural recognition molecule NB-3 [Macaca fascicularis]
Length = 1029
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLLWKCKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ ++ GG++ I C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G ++ G LIV +
Sbjct: 446 GTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII---DLKKGMAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P V+V E+ T++ + W G
Sbjct: 562 LMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I +T ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP + GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTAKNAGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G+II FE G+L+I + + SG Y CT +
Sbjct: 530 EVVFVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 VNGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVASVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEVILKCAANGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAISSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGRPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGRPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL +C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>gi|345786348|ref|XP_533761.3| PREDICTED: contactin-3 [Canis lupus familiaris]
Length = 1015
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 246/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 322 NLFWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 373
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+PKP WKK
Sbjct: 374 CIAENKHGLIYSSAELKVVASAPDFSKAPMKKLMQVQVGSMVSLDCKPRASPKPVCSWKK 433
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R ++G L I+ V++ D+G Y+C A N G RL+V P+
Sbjct: 434 GDMIVQENERISFLKDGGLKIANVTKADAGTYTCIAENQFGKANGTTRLVVTE-PTRITL 492
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 493 APSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGGSSSGDLM- 551
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 552 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGTD 611
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 612 NHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 666
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 667 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVV 726
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 727 AFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSLYEVKVGVYNNKGEGPFSPVTTVFS 785
Query: 484 --HDPLVIISYVCQGDL 498
+P + S V L
Sbjct: 786 AEEEPTIAPSRVSANSL 802
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 227 AAKGATVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDTGSYEC 285
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 286 IAENSRGRNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLFWECRASGKP--KPSYRWLKN 342
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G I S + V+
Sbjct: 343 GEA---LVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 395
Query: 278 P 278
P
Sbjct: 396 P 396
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 111/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +N L + RY + L + +NP R D Y
Sbjct: 34 ITLNCEARGNPSPHYRWQLNGSDIN-----LSMEYRYKLDGGNLVV--INPNRNWDTGNY 86
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 87 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 144
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L I+ V D G Y+C T+ G L
Sbjct: 145 WIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTKARVLGSPTPLVL 204
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 205 RSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVPQINWRRSDGLPFSSKIKLR 264
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N D G YEC+ +++ G+
Sbjct: 265 KF--------NGVLEIPNFQQEDTGSYECIAENSRGR 293
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 183/499 (36%), Gaps = 65/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + G+++ E ++ F++D L I + + D Y C A+N
Sbjct: 419 CKPRASPKPVCSW-KKGDMIVQE-----NERISFLKDGGLKIANVT-KADAGTYTCIAEN 471
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q + +L V+T P + GE +V + C + P F W +G
Sbjct: 472 QFGKANGTTRL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGA 528
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 529 LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGP 588
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + K+ QL T+ V P + IDG
Sbjct: 589 PENV--KVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEV-IDGKT 645
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
T EYE V + +G K+ T+ V P + GG
Sbjct: 646 HTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----S 701
Query: 292 KTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
++ I W +G G + ++ + TNW + V + RY R E
Sbjct: 702 RSELVITWDPVPEELQNGGGFGY-VVAFRPLGVTNW------IQTVVTSPDTPRYVFRNE 754
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ ++P+S YE KV N G G P SP + ++P APSR+ ++
Sbjct: 755 S-----IMPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSRVSANSLSSSEIE 808
Query: 405 ISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEY 461
+SW +P + N + Y++ +W N E S +K GN A +R + S YYT
Sbjct: 809 VSWNTIPWKLSNGHLLGYEVRYW--NNGEEESSSKVKVAGNETSARLRGLKSNLAYYT-- 864
Query: 462 EVKVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 865 --AVRAYNSAGAGPFSTTV 881
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F + P S G E +T+ C P P + W+ +G+ I S R +
Sbjct: 9 LLLQGPVFIREPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLD 68
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 69 GGNLVVINPNRNWDTGNYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 128
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 129 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 182
Query: 257 ECVVKSTVGK 266
CVV STV K
Sbjct: 183 TCVVTSTVTK 192
>gi|148666975|gb|EDK99391.1| contactin 6, isoform CRA_a [Mus musculus]
Length = 1028
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ +Y+W +NG+ LN+E +R I++ L I LN D +YQ
Sbjct: 334 SLFWECKASGNPNPSYTWLKNGQRLNTE-------ERIQIENGTLIITMLNIS-DSGIYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRVL P F K P++ + GG+++I C P A PK WK+
Sbjct: 386 CAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R E+G+L I V+R D+G Y+C ATN G +S G L+V +
Sbjct: 446 GTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKER-TIITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGQTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + + R S + +EVKV N+ G G S V +
Sbjct: 737 IVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
+++Y+W N L +++ R F+ + + + E D Y C N+ R
Sbjct: 152 ELSYAW-----TFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS 206
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L L+ P + R E+ A + ++ + C P P W++ D
Sbjct: 207 VQGPPTPLVLRTDGVMGEYEPKIEVRFPET-IQAAKDSSIKLECFALGNPVPDISWRRLD 265
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G+ + G+ K ++ +L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 266 GSPMP--GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQ 322
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + +Y W NG R+ + I I+ G L I
Sbjct: 323 KIQNTYLSIYDSLFWECKASGNP--NPSYTWLKNGQRLNTEE-------RIQIENGTLII 373
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 374 TMLNISDSGIYQCAAEN 390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 182/503 (36%), Gaps = 56/503 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + F++D L I + D Y
Sbjct: 425 GDISIECKPNAFPKASISWKRGTENLK------QSKRVLFLEDGSLKICNVT-RADAGSY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ SS L V+ + P + + GE ++ + C P + FV
Sbjct: 478 TCVATNQFGNGKSSGGL-VVKERTIITVPPSKMDVTVGE--SIVLPCQVSHDPTMEVLFV 534
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G+II FE G+L+I + SG Y CT + +IV
Sbjct: 535 WYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + + L R + + I T +G + + P I
Sbjct: 595 RGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI 652
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V + +G + TK +V P PG +
Sbjct: 653 -LNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASV----PNVAPGNI 707
Query: 286 QVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 339
++ I W + NG I ++ + T W + E V E ++
Sbjct: 708 NGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW------MKERVALVESSKF 761
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 762 IYRNES-----IMPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFS 815
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
++ +SW + + + Y++ + N E ++ GNV I T
Sbjct: 816 ASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRANT 873
Query: 460 EYEVKVQAINDVGPGPESEVVTI 482
Y V+A N G GP S V +
Sbjct: 874 IYFASVRAYNTAGTGPSSPPVNV 896
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 28/291 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ TC A G P Y W +NG ++ Y + L I ++D
Sbjct: 42 SRSEIILTCTANGYPSPHYRWKQNGTDID-----FGMTYHYRLDGGSLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKF 121
+YQC A N + T S F+ + S EG V + C P + +
Sbjct: 97 IYQCLATNPVGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLCGPPPHFGELSY 155
Query: 122 VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIV 176
W D + +R+ + GNL + V D G Y+C TN +G +V
Sbjct: 156 AWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLV 215
Query: 177 L--------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + P + P I A +++L C A + D+++ G +
Sbjct: 216 LRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPDISWRRLDGSPMPGKIKY 275
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ + +LEI D G YEC+ + G+ K +I PP
Sbjct: 276 SKSQ--------AILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 318
>gi|109035933|ref|XP_001101681.1| PREDICTED: contactin-6 isoform 2 [Macaca mulatta]
gi|355559496|gb|EHH16224.1| Neural recognition molecule NB-3 [Macaca mulatta]
Length = 1029
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLLWKCKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ ++ GG++ I C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G ++ G LIV +
Sbjct: 446 GTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII---DLKKGMAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P V+V E+ T++ + W G
Sbjct: 562 LMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I +T ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP + GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTAKNAGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G+II FE G+L+I + + SG Y CT +
Sbjct: 530 EVVFVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 VNGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVASVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEVILKCAANGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAISSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL +C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>gi|395824772|ref|XP_003785629.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Otolemur garnettii]
Length = 1470
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 249/499 (49%), Gaps = 24/499 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 776 NLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLNVS-DSGMFQ 827
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ A G V++ C P A+P+ + WKK
Sbjct: 828 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQAQVGSLVSLDCKPRASPRAQSFWKK 887
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R ++G L I+ V++ D+G Y+CTA N G L+V P+
Sbjct: 888 GEVIVQEQERISFLKDGGLKIANVTKADAGTYTCTAENQFGKANGTTHLVVTE-PTKITL 946
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P + ++ ++ L C + LLD+ + W NG D + + + G G
Sbjct: 947 APSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGAL---ADFKKEGSHFEKVGGSSSGD 1003
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 1004 LMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEG 1063
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+
Sbjct: 1064 TDNHSPVLSYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVV 1118
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN + Y
Sbjct: 1119 ANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGLGY 1178
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + +T+ + V R S ++ YEVKV N+ G GP S V T+
Sbjct: 1179 VVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIMPFSPYEVKVGVYNNKGEGPFSPVTTV 1237
Query: 483 W---HDPLVIISYVCQGDL 498
+ +P V S V L
Sbjct: 1238 FSAEEEPTVAPSQVFANSL 1256
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 111/275 (40%), Gaps = 30/275 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T CEA G P Y W LN + + + RY + L + N RD YQC
Sbjct: 488 ITLNCEARGSPSPHYRW-----QLNGSDIDMSLEHRYKLNGGNLVVINPNRNRDTGSYQC 542
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFV 122
A N L T S A+L+ L+ +FK + + S EG V + C P ++
Sbjct: 543 FATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYAWI 600
Query: 123 WKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVL 177
+ + + + RR + E G+L IS V D G Y+C T TN + ++
Sbjct: 601 FNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRS 660
Query: 178 HG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
G P Q P + A ++L C A + + + + + L +
Sbjct: 661 DGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF 720
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
G+LEI N DAG YEC+ +++ GK
Sbjct: 721 N--------GVLEIPNFQQEDAGSYECIAENSRGK 747
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 681 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 739
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 740 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLYWECRASGKP--KPSYRWLKN 796
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + +D+G ++C+ ++ G + S + V+
Sbjct: 797 G---EALVLEE----RIQIENGALTISNLNVSDSGMFQCIAENKHGLVYSSAELKVVASA 849
Query: 278 P 278
P
Sbjct: 850 P 850
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 187/486 (38%), Gaps = 59/486 (12%)
Query: 22 SWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80
S+++ GE++ +++Q+R F++D L I + + D Y C A+NQ +
Sbjct: 883 SFWKKGEVI------VQEQERISFLKDGGLKIANVT-KADAGTYTCTAENQFGKANGTTH 935
Query: 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKI 138
L V+T P + GE +V + C + P F W +G +
Sbjct: 936 L-VVTEPTKITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGALADFKKEGSH 992
Query: 139 FE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 192
FE +G+L+I + SG Y C S LIV P E + K+
Sbjct: 993 FEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--KVDE 1050
Query: 193 AAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
QL T+ V I +G + + P + IDG T
Sbjct: 1051 ITDTTAQLSWKEGTDNHSPVLSYSIQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVEL 1107
Query: 251 ADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
EYE V + +G K+ T+ V P + GG ++ I W
Sbjct: 1108 NPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITW 1163
Query: 300 T---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ NG + Y + R +TW + V + RY R E+ ++P+S
Sbjct: 1164 DPVPEELQNGEGLG-YVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IMPFSP 1215
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE KV N G G P SP + ++P APS++ ++ +SW +P + N
Sbjct: 1216 YEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVFANSLSSSEIEVSWNTIPWKLSN 1274
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPG 474
+ Y++ + E S ++ GN A +R + S YYT V+A N GPG
Sbjct: 1275 GHLLGYEVRYWNSGGREESSSKVRVAGNETSARLRGLKSNLAYYT----AVRAYNSAGPG 1330
Query: 475 PESEVV 480
P S V
Sbjct: 1331 PFSATV 1336
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 88 PSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNL- 144
P F K P S G E +T+ C +P P + W+ +G+ I S R GNL
Sbjct: 468 PVFIKEPSNSIFSVGSEDKKITLNCEARGSPSPHYRWQLNGSDIDMSLEHRYKLNGGNLV 527
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 203
+I+P D+G Y C ATN G S+ +L + ++ ++ +++ + + L C
Sbjct: 528 VINPNRNRDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCG 587
Query: 204 --AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
H+ EL +Y W N + E ++ + G L I+ +D G Y CVV
Sbjct: 588 PPPHSGEL---SYAWIFNEY---PSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVT 641
Query: 262 STV 264
STV
Sbjct: 642 STV 644
>gi|297285390|ref|XP_002802773.1| PREDICTED: contactin-6 [Macaca mulatta]
Length = 957
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 262 NLLWKCKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 313
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ ++ GG++ I C P A P+ WK+
Sbjct: 314 CAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR 373
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G ++ G LIV +
Sbjct: 374 GTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVKER-TVITV 432
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 433 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII---DLKKGMAHFERIGGESVGD 489
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P V+V E+ T++ + W G
Sbjct: 490 LMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVEEISSTTSQLSWRAG 549
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I +T ++ W + + G+ + L PW YEF+V+
Sbjct: 550 PDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 604
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP + GGGG +L I+WE +P E QN Y
Sbjct: 605 AGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEELQNGEGFGY 664
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 665 IIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 723
Query: 483 W 483
+
Sbjct: 724 Y 724
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 353 GDIVIECKPNAFPRAAISWKRGTETLR------QSKRMFLLEDGSLKI-YNVTRSDAGSY 405
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 406 TCIATNQFGTAKNAGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 457
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G+II FE G+L+I + + SG Y CT +
Sbjct: 458 EVVFVWFFNGDIIDLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAV 517
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 518 ADIIVRGPPGPPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGWQAVATV 577
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V P
Sbjct: 578 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVN 634
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 635 VNGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--TKEKVASVESS 687
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 688 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQS 741
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 742 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 799
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 800 NTIYFASVRAYNTAGTGPSSPPVNV 824
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 80 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 133
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 134 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 192
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 193 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 249
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL +C A + + Y W NG R LN E I I+ G L
Sbjct: 250 QKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 300
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 301 ITMLNVSDSGVYQCAAEN 318
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 94/255 (36%), Gaps = 31/255 (12%)
Query: 43 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 102
Y + L I + ++D MYQC A N L T S F+ + S
Sbjct: 5 YRLDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVR 63
Query: 103 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 154
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 119
Query: 155 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 204
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 231
Query: 265 GKISTKTTVIVEGPP 279
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
>gi|449484285|ref|XP_002198167.2| PREDICTED: contactin-5 [Taeniopygia guttata]
Length = 1099
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 159/483 (32%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C+A G P TY W +NG +PL Q R + + VL I N D
Sbjct: 400 LDSGDQLRWECKATGKPRPTYRWLKNG-------VPLWPQSRIEMINGVLMIHSANVS-D 451
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ T Y+SA+L++L P+F + +G V I C PEA+PKP
Sbjct: 452 AGMYQCLAENKYGTIYASAELKILASAPTFPLNQMRKTIIVTKGQEVVIECKPEASPKPT 511
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK ++ R + +G+L I S+ D G Y C NV G E + V P
Sbjct: 512 ITWKKGDKVLRENKRITVLPHGSLRILNASKSDEGRYLCQGVNVFGSAEIIASVSVKE-P 570
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P K+ + ++ L C A + +DV + WT NG I + E+
Sbjct: 571 TRIELTPKKVELTVGESIVLSCRALHDSTMDVTFYWTLNGQPIDFEKEGGHFESIKAQAS 630
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++ +S +T ++V GPPG PG V V E+ T+AT+ W
Sbjct: 631 SADLMIRNILLMHAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIVEEITDTTATLSW 690
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ GA N PI+ Y + AR+ ++ W + D +G E+++ L PW YEF
Sbjct: 691 SPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPDLISGDMESAMAVELNPWVEYEF 745
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G G+PS+PS T P P+ + G G+ +L I+WEP+ E Q+
Sbjct: 746 RVVATNKIGTGDPSAPSRVIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQSGEG 805
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S +
Sbjct: 806 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPI 864
Query: 480 VTI 482
V I
Sbjct: 865 VVI 867
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 108/279 (38%), Gaps = 33/279 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C+A G P TY W RNG +N +E R+ + + L I + +D
Sbjct: 115 EKKVSLNCQARGNPTPTYRWLRNGTEIN-----IESDYRFSLIEGSLIISNPSEMKDSGQ 169
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFV 122
YQC N + S + +F R S EG V + C+P +P+ +
Sbjct: 170 YQCLTTNMFGSILSREAVLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPLHSPEIIYS 228
Query: 123 W--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
W + + + RR I E GNL IS V D G Y C T TN + +
Sbjct: 229 WVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTL 288
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMD 227
G P P +T A +++ C A + +++ + HN +
Sbjct: 289 RNDGVMGEYEPKIEVHFPYVVTAARGTTVKMECFALGNPVPTISWRKVNGHNPSKA---- 344
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ +LEI N D+G YEC +++ G+
Sbjct: 345 -------RLRKSQAVLEIPNVQLEDSGMYECKAENSRGR 376
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 105/276 (38%), Gaps = 26/276 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 223 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 278
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKK-DG 127
+ LTL+ E + A G V + C P P W+K +G
Sbjct: 279 VLSPPTPLTLRNDGVMGEYEPKIEVHFPYVVTAARGTTVKMECFALGNPVPTISWRKVNG 338
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ RK L I V +DSG+Y C A N G + +G+L V P + E+L
Sbjct: 339 HNPSKARLRK--SQAVLEIPNVQLEDSGMYECKAENSRGRNVFRGQLQVYTYPHWVEKL- 395
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + L+ C A + Y W NGV + I + G+L I +
Sbjct: 396 NDTQLDSGDQLRWECKATGKP--RPTYRWLKNGVPLWPQS-------RIEMINGVLMIHS 446
Query: 248 ASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 282
A+ +DAG Y+C+ ++ G I + I+ P P
Sbjct: 447 ANVSDAGMYQCLAENKYGTIYASAELKILASAPTFP 482
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 160
E V++ C P P + W ++G I S R + E ++ +P DSG Y C
Sbjct: 114 EEKKVSLNCQARGNPTPTYRWLRNGTEINIESDYRFSLIEGSLIISNPSEMKDSGQYQCL 173
Query: 161 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 217
TN+ G S+ ++ + ++ + +++ + + L CS H+ E++ Y W
Sbjct: 174 TTNMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEII---YSWV 230
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
N + E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 231 FNEF---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 274
>gi|449474272|ref|XP_002186724.2| PREDICTED: contactin-3, partial [Taeniopygia guttata]
Length = 916
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 233/478 (48%), Gaps = 17/478 (3%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NGE L E R I++ LTI LN D YQC
Sbjct: 235 LYWDCRASGKPKPSYRWLKNGEQLAIE-------GRIQIENGALTISNLN-LTDSGRYQC 286
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ SSA+LRV+ P F K P++ G V C P+A PK K WKK
Sbjct: 287 IAENKHGVISSSAELRVVASAPDFSKSPMKKLIQVQIGSTVDFECKPKAFPKAKRSWKKG 346
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + R + ++G L I+ V++ D+G Y+C ATN G L+V P+
Sbjct: 347 GEQLQENERISLLKDGGLRIANVTKGDAGSYTCLATNQFGTARGSTSLVVTE-PTRITLA 405
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + + ++ L C + LLD+++ W NG D + E + G L+ I
Sbjct: 406 PSNMDVTVGESVVLPCQVQHDPLLDISFTWYFNGTLTDFQRDASHFEKVGGSASGDLM-I 464
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+VK+ V +++ +IV G PG P V+V EV T+A I W +G N
Sbjct: 465 RNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEVTDTTAQISWQEGTDN 524
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+T Y I ART ++ W + D G+ S L PW YEF+V+A N
Sbjct: 525 HSPVTTYSIQARTPFSVGWQRAT-----TVPDVIDGKTFTSTVVDLNPWVEYEFRVVATN 579
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 580 KIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVA 639
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 640 FRPSGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSAVATVF 696
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 181/496 (36%), Gaps = 58/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + GE L E++ ++D L I + + D Y C A N
Sbjct: 331 CKPKAFPKAKRSWKKGGEQLQ------ENERISLLKDGGLRIANVT-KGDAGSYTCLATN 383
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q T S L V+T P + GE +V + C + P F W +G
Sbjct: 384 QFGTARGSTSL-VVTEPTRITLAPSNMDVTVGE--SVVLPCQVQHDPLLDISFTWYFNGT 440
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 441 LTDFQRDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGP 500
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDG 240
E + ++ Q+ T+ V I +G + P++ IDG
Sbjct: 501 PEHV--RVDEVTDTTAQISWQEGTDNHSPVTTYSIQARTPFSVGWQRATTV--PDV-IDG 555
Query: 241 GLLEITNASFADAGEYECVVKST--VG---------KISTKTTVIVEGPPGLPGGVQVVE 289
T EYE V +T +G K+ T+ V P + GG
Sbjct: 556 KTFTSTVVDLNPWVEYEFRVVATNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGG--- 612
Query: 290 VHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ I W + NG Y + R + +TW + V + RY R E+
Sbjct: 613 -SRSELVITWDPVPEELQNGEGF-GYVVAFRPSGTTTW--IQTVVTSPDTPRYVFRNES- 667
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
++P+S YE KV N G G P S + ++P APS + + +S
Sbjct: 668 ----ILPFSPYEVKVGVYNNKGEG-PFSAVATVFSAEEEPSTAPSGVSATSLSSSAIQVS 722
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEF-YYTEYEVK 464
W +P + N + Y++ + K E S +K GN I + + S YYT
Sbjct: 723 WTAIPWKMSNGRLLGYEVRYWNKGQKEESSNRVKAAGNETSIKITGLRSNLAYYT----A 778
Query: 465 VQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 779 VRAYNSAGAGPFSATV 794
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 10/175 (5%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P+ W++ + + NG + I ++D+G+Y C
Sbjct: 139 AAKGSTVKLECFALGNPVPQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECI 198
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
N G + ++GRL P + + + + +A L C A + +Y W NG
Sbjct: 199 TENSRGKNIARGRLTYYAKPHWIQTI-KDMEVAVEDTLYWDCRASGKP--KPSYRWLKNG 255
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ +E I I+ G L I+N + D+G Y+C+ ++ G IS+ + V
Sbjct: 256 EQLA------IEG-RIQIENGALTISNLNLTDSGRYQCIAENKHGVISSSAELRV 303
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 24/233 (10%)
Query: 95 LESETYAGEGGNVTIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVS 150
+ S EG V + C P A F W + + + RR + E G+L I+ V
Sbjct: 28 MRSAVSVREGQGVVLLCGTPPRAGDMSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVE 87
Query: 151 RDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQL 200
D G YSC T+ G L + P Q P + A ++L
Sbjct: 88 PSDVGNYSCVVTSRASSSPVLGSPTPLVLRTDGVMGEYEPKIEVQFPETMAAAKGSTVKL 147
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
C A + + + T + L + G++EI N DAG YEC+
Sbjct: 148 ECFALGNPVPQINWRRTDGLPFPSKIKLRK--------SNGMIEIPNFQQEDAGLYECIT 199
Query: 261 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 313
+++ GK + + P ++ +EV T+ W D +G+P Y+
Sbjct: 200 ENSRGKNIARGRLTYYAKPHWIQTIKDMEV-AVEDTLYW-DCRASGKPKPSYR 250
>gi|338714572|ref|XP_001497209.2| PREDICTED: contactin-6 [Equus caballus]
Length = 1030
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 238/481 (49%), Gaps = 23/481 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G P+ Y+W +NGE L+ E +R I++ L I LN D +YQC
Sbjct: 336 LLWECKARGKPNPWYTWLKNGERLSPE-------ERIQIENGTLIITMLNLS-DSGVYQC 387
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + Y++A+LRVL P F K P++ + GG++ I C P A P+ WK+
Sbjct: 388 AAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDIAIECKPIAFPRAAISWKRR 447
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + E+G+L I V+R D+G Y+C ATN G+ + G L+V L
Sbjct: 448 AESLKQSKRVSLLEDGSLKIYNVTRSDAGSYTCIATNQFGVARNTGSLVVKE--RTIITL 505
Query: 187 PP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
PP K+ + ++ L C + ++V ++W+ NG I DL + I G G
Sbjct: 506 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI---DLKKGVAHFERIGGESVGD 562
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G
Sbjct: 563 LMIRNIQLNHSGKYLCTVKTTLESLSAAADIIVRGPPGPPDDVRVEHISSTTSQLSWRPG 622
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ N PI + + ART ++ W + + +G+ + L PW YEF+V+
Sbjct: 623 SDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILSGKTYNATVVGLSPWVEYEFRVV 677
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 678 AGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGY 737
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I R T + E + + V R S + +EVKV N G G S V +
Sbjct: 738 IIMLRPVGSTTWIKERVPSVESSRF-VYRNESIIPLSPFEVKVGVYNKEGEGSLSTVSIV 796
Query: 483 W 483
+
Sbjct: 797 Y 797
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + ++D L I Y D Y
Sbjct: 426 GDIAIECKPIAFPRAAISWKRRAESLK------QSKRVSLLEDGSLKI-YNVTRSDAGSY 478
Query: 65 QCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ ++ L V +TL PS + + GE ++ + C P
Sbjct: 479 TCIATNQFGVARNTGSLVVKERTIITLPPS------KMDVTVGE--SIVLPCQVSHDPSI 530
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + + SG Y CT +
Sbjct: 531 EVVFVWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAA 590
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P + + + + L R + + + + +G ++ +
Sbjct: 591 ADIIVRGPPGPPDDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTV 650
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I + G T + EYE V +++G + TK +V V P
Sbjct: 651 --PEI-LSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTN 707
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW + E V E
Sbjct: 708 INGGGG----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTTW--IKERVPSVESS 760
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N+ G G S+ S Y+ D+P AP
Sbjct: 761 RFVYRNES-----IIPLSPFEVKVGVYNKEGEGSLSTVSIVYSG-EDEPQLAPRGTSVQS 814
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E + GNV I
Sbjct: 815 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKTRVSGNV--TTKNITGLKA 872
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 873 NTVYFASVRAYNTAGTGPSSPPVNV 897
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 106/295 (35%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+ +++ C A G P Y W +NG ++ Y + L I ++D
Sbjct: 43 SNSEIILNCAADGYPSPHYRWKQNGRDID-----FTMSYHYRLDGGSLAISSPQTDQDIG 97
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
YQC A N L T S F+ + S EG V + C P P F
Sbjct: 98 TYQCLATNPLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 152
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 153 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQKSVQGPP 212
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 213 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKGSSVKLECFALGNPVPDISWRRLDGSPLPG 272
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I P
Sbjct: 273 KVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYALP 319
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ +
Sbjct: 153 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQK 206
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A +G +V + C P P W++
Sbjct: 207 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKGSSVKLECFALGNPVPDISWRRL 265
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A N+ G + +KG+LI P +E
Sbjct: 266 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYALPE-WE 322
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + +L C A + + Y W NG R+ + I I+ G L
Sbjct: 323 QKIQNTYLSIYDSLLWECKARGKP--NPWYTWLKNGERLSPEE-------RIQIENGTLI 373
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 374 ITMLNLSDSGVYQCAAEN 391
>gi|281346449|gb|EFB22033.1| hypothetical protein PANDA_004018 [Ailuropoda melanoleuca]
Length = 979
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 240/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 317 NLFWECKASGKPNPLYTWLKNGERLNPE-------ERIQIENGTLVITMLNVS-DSGVYQ 368
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ + GG++TI C P A P+ WK+
Sbjct: 369 CAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRATISWKR 428
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G+ ++ G L+V +
Sbjct: 429 GMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKER-TVITI 487
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V +IW+ NG I DL + I G G
Sbjct: 488 PPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI---DLKKGVAHFERIGGESVGD 544
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G
Sbjct: 545 LMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPG 604
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ N PI + I ART ++ W + + +G+ + L PW YEF+V+
Sbjct: 605 SDNNSPIQIFTIQARTPFSVGW-----QAVSTVPEILSGKTYNATVVGLSPWVEYEFRVV 659
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS S T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 660 AGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGY 719
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 720 IIMLRPVGSTAWTKERVPSVESSRF-VYRNESITPLSPFEVKVGVYNNEGEGSLSTVSIV 778
Query: 483 W 483
+
Sbjct: 779 Y 779
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 183/500 (36%), Gaps = 50/500 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+T C+ P T SW R E L R F+ ++ Y D Y
Sbjct: 408 GDITIECKPNAFPRATISWKRGME-------SLRQSKRVFLSEDGSLKIYNVTRSDAGSY 460
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ ++ L V+ + P + + GE ++ + C P + F+
Sbjct: 461 TCIATNQFGVAKNTGSL-VVKERTVITIPPSKMDVTVGE--SIVLPCQVSHDPSIEVVFI 517
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G++I FE G+L+I + + SG Y CT + +IV
Sbjct: 518 WSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIV 577
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + + L R + + + I +G ++ + P I
Sbjct: 578 RGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGWQAVSTV--PEI 635
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
+ G T + EYE V +++G + TK +V V P + GG
Sbjct: 636 -LSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGG 694
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG Y I+ R ++ W E V E R+ R
Sbjct: 695 G----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTAW--TKERVPSVESSRFVYR 747
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E+ + P S +E KV N G G S+ S Y+ D+P QAP +
Sbjct: 748 NES-----ITPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQQAPRGTSVQSFSASE 801
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW+ + + + Y++ + + E ++ GNV I T Y
Sbjct: 802 MEVSWKAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYF 859
Query: 463 VKVQAINDVGPGPESEVVTI 482
V+A N G GP S V +
Sbjct: 860 ASVRAYNTAGAGPSSPPVNV 879
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 25 SESEIILNCAASGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGNLAISSPHTDQDIG 79
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 80 MYQCLATNTLGTILSRKAKLQFAYIEDFETK-TRSAVSVREGQGVVLLC----GPPPHFG 134
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 135 DLFYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 194
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 195 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPDISWRRLDGNPLPG 254
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 255 KVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 301
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D+ Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 135 DLFYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 188
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + ++ + C P P W++
Sbjct: 189 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSIKLECFALGNPVPDISWRRL 247
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DGN + G+ K ++ +L P ++D G Y C A N+ G + +KG+LI + P +E
Sbjct: 248 DGNPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWE 304
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 305 QKIQNTYLSIYDNLFWECKASGKP--NPLYTWLKNGER-----LNPEE--RIQIENGTLV 355
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 356 ITMLNVSDSGVYQCAAEN 373
>gi|354489954|ref|XP_003507125.1| PREDICTED: contactin-6-like [Cricetulus griseus]
Length = 1028
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 237/488 (48%), Gaps = 35/488 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ Y+W +NGE L+ E +R I++ L I LN D +YQ
Sbjct: 334 SLFWECKASGKPNPWYTWLKNGERLHPE-------ERIQIENGTLIITMLNVS-DSGIYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRVL P F K P++ + GG+++I C P A PK WK+
Sbjct: 386 CAAENKYQTIYANAELRVLASAPDFSKNPIKKTSVVQVGGDISIECKPNAFPKASISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G +S G LIV +
Sbjct: 446 GTESLRQSKRVFLLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVKE-KTVITT 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPTMEVVFVWYFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVTTIPEILNGQTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNNIGIGEPSKPSELLRTKASVPIVAPVNINGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE-------YEVKVQAINDVGPGP 475
+ +R T + E +A+V Y E +EVKV N+ G G
Sbjct: 737 IVMFRPVGSTTWMKER--------VALVESSRYIYRNESIMPLSPFEVKVGVYNNEGEGS 788
Query: 476 ESEVVTIW 483
S V ++
Sbjct: 789 LSTVSIVY 796
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 184/500 (36%), Gaps = 50/500 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + + ++D L I + D Y
Sbjct: 425 GDISIECKPNAFPKASISWKRGTESLR------QSKRVFLLEDGSLKICNVT-RSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ SS L ++ K P + + GE ++ + C P + FV
Sbjct: 478 TCVATNQFGNGKSSGSL-IVKEKTVITTPPSKMDVTVGE--SIVLPCQVSHDPTMEVVFV 534
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G++I FE G+L+I + SG Y CT + +IV
Sbjct: 535 WYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + + L R + + I T +G + + P I
Sbjct: 595 RGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVTTI--PEI 652
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V + +G + TK +V + P + GG
Sbjct: 653 -LNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPIVAPVNINGGG 711
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG Y ++ R ++TW + E V E RY R
Sbjct: 712 G----SRSELVITWESIPEELQNGEGF-GYIVMFRPVGSTTW--MKERVALVESSRYIYR 764
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E+ ++P S +E KV N G G S+ S Y+ D+P AP +
Sbjct: 765 NES-----IMPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQLAPRGTSVQSFSASE 818
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW + + + Y++ + N E + GNV I T Y
Sbjct: 819 MEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKSRVSGNV--TTKNITGLRANTIYF 876
Query: 463 VKVQAINDVGPGPESEVVTI 482
V+A N G GP S V +
Sbjct: 877 ASVRAYNTAGTGPSSPPVNV 896
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 112/296 (37%), Gaps = 38/296 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ TC A G P Y W +NG ++ Y + L I ++D
Sbjct: 42 SRSEIILTCTANGYPSPHYRWKQNGTDID-----FSMTYHYRLDGGNLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
YQC N + T S A+L+ ++ K G+GG T+ C P P F
Sbjct: 97 TYQCLVTNTVGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGG--TVLC----GPPPHF 150
Query: 122 -----VWKKDGN--IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W + N + RR + + GNL I+ V D G Y+C TN +G
Sbjct: 151 GDLSYAWTFNDNPLYVQEDKRRFVSQVTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQGP 210
Query: 174 LIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L + P + P I A +++L C A + D+++
Sbjct: 211 PTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGNPMP 270
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + ++ + +LEI D G YEC+ + G+ K +I PP
Sbjct: 271 GKVKYSKSQ--------AILEIPEFHQEDEGYYECIAGNLRGRNLAKGQLIFYAPP 318
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
D++Y+W N L + ED+ R+ Q L I + P D Y C N+ R
Sbjct: 152 DLSYAWTFNDNPLYVQ----EDKRRFVSQVTGNLYIAKVEPS-DVGNYTCFVTNKEAHRS 206
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L + P + R E+ A + +V + C P P W++ D
Sbjct: 207 VQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRLD 265
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
GN + G+ K ++ +L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 266 GNPMP--GKVKYSKSQAILEIPEFHQEDEGYYECIAGNLRGRNLAKGQLI-FYAPPEWEQ 322
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + + Y W NG R+ + I I+ G L I
Sbjct: 323 KIQNTYLSIYDSLFWECKASGKP--NPWYTWLKNGERLHPEE-------RIQIENGTLII 373
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 374 TMLNVSDSGIYQCAAEN 390
>gi|410908411|ref|XP_003967684.1| PREDICTED: contactin-1a-like [Takifugu rubripes]
Length = 1002
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 239/483 (49%), Gaps = 36/483 (7%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T +C A G P+ W +NGELL DR + N LT D MYQC
Sbjct: 334 TMSCVASGKPEPQIRWMKNGELL----------DRDEMSFNSLTFE------DSGMYQCV 377
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
A+N+ Y++A+LRV P+F+ PL+ A G V I C P+AAPKP F W KD
Sbjct: 378 AENRHGVLYANAELRVFACAPTFEHNPLK-RVLAPRNGRVVIECRPKAAPKPTFTWSKDT 436
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
++ + R I+E+G+L I V+R D G Y+C A N G S G L+VL + P
Sbjct: 437 ELLSNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLES-TKINLAP 495
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEIT 246
I A N ++C+A + LD+ +IW+ + I D E G L I
Sbjct: 496 TNADIKAGENALMQCAALHDPSLDITFIWSLDDHVIDVQTDSQHYERGTNGSSNGALLIK 555
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
NA AG Y C+ ++ + + ++V GPPG PGGV+V+ + T+QW+ GA N
Sbjct: 556 NAQLKHAGRYTCMAQTPIDNATESAQLVVRGPPGAPGGVRVMNKTEKKVTLQWSRGADNH 615
Query: 307 RPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
PI+ Y I R ++ W + EV+ G E + L PW+ YEF+V A N
Sbjct: 616 SPISKYSIQYRDAYSGDEWKKAA--TSPPEVE---GNAETATVVDLFPWTEYEFRVFAAN 670
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
LG GEPSSP+ + T P APS IGGGGG +L+I+W P+ + N Y +
Sbjct: 671 TLGTGEPSSPTAKEKTLDAVPVVAPSNIGGGGGTSRELTITWTPVQPQHYYGSNFGYIVA 730
Query: 426 WRKKNDTEFQSETL-----KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+R ++ E++ + + Y + +A+ + T+++VKV+A N G GP S
Sbjct: 731 FRPFDNKEWRKVMVADPLARSYIHKDLALPPL------TKFQVKVKAFNSKGEGPFSLTA 784
Query: 481 TIW 483
I+
Sbjct: 785 VIY 787
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 185/500 (37%), Gaps = 63/500 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPER-DPAMYQCRA 68
C P T++W ++ ELL++ T R FI +D L I LN R D Y C A
Sbjct: 420 CRPKAAPKPTFTWSKDTELLSNST-------RVFIWEDGSLEI--LNVTRADEGRYTCFA 470
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N S+ L VL P ++ AGE + + + F+W D +
Sbjct: 471 ENDRGKANSTGSLLVLE-STKINLAPTNADIKAGENALMQCAALHDPSLDITFIWSLDDH 529
Query: 129 IIGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+I + +E NG LLI +G Y+C A +L+V P
Sbjct: 530 VIDVQTDSQHYERGTNGSSNGALLIKNAQLKHAGRYTCMAQTPIDNATESAQLVVRGPPG 589
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDG 240
+ ++ + + L+ S + ++ Y + G+ + + T ++G
Sbjct: 590 APGGV--RVMNKTEKKVTLQWSRGADNHSPISKYSIQYRDAYSGD-EWKKAATSPPEVEG 646
Query: 241 GLLEITNASFADAGEYECVV-----------KSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
T EYE V S K T V V P + GG
Sbjct: 647 NAETATVVDLFPWTEYEFRVFAANTLGTGEPSSPTAKEKTLDAVPVVAPSNIGGGGGT-- 704
Query: 290 VHKTSATIQWTD-------GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
TI WT G+ G Y + R N W V ++ + R
Sbjct: 705 --SRELTITWTPVQPQHYYGSNFG-----YIVAFRPFDNKEWRKV---MVADPLARSYIH 754
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
K+ + L P + ++ KV A N G G P S + + D P +APS G +
Sbjct: 755 KDLA----LPPLTKFQVKVKAFNSKGEG-PFSLTAVIYSAQDAPSEAPSGFEGKALSATE 809
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+SW PLP Q++ + Y FWR ++E ++T+ R+ + Y
Sbjct: 810 AFVSWLPLP---QDSIDGYQVKFWRNHEESEGGAQTVTASNT--DTNTRLDGMKPNSNYL 864
Query: 463 VKVQAINDVGPGPESEVVTI 482
++V+ N G GP SE + I
Sbjct: 865 IEVRGYNTAGYGPPSERLQI 884
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 107/293 (36%), Gaps = 34/293 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+A +T C A P TY W ++ + ++ + + + L I E+
Sbjct: 41 EAKITMNCRARASPPATYKWRKDNKDIDFSA----ESSHFSLMGGNLVISDPVKEQHAGN 96
Query: 64 YQCRAKNQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE----AA 116
Y C A N T R +S Q L L F ES + EG + C P A
Sbjct: 97 YCCLAANTFGTVISREASVQFGYLDL---FSSEERES-VHVKEGQGAVLLCAPPPHYPAE 152
Query: 117 PKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
+++ + I RR + + GNL IS V DSG YSC A++ I
Sbjct: 153 LSFRWILNEFPTFIPLDKRRFVSQITGNLYISKVDSSDSGNYSCIASSSSISKSVFSNYI 212
Query: 176 VL------HGPSYYEQLP---PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L H Y L P T +N+ L C A + ++ +W +
Sbjct: 213 PLVPLSERHNRKYPADLNVKFPDTTALVGQNITLECFALGNPVPEI--MWK-------KL 263
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
D + G L + N F D+G Y+C ++ GK + VE P
Sbjct: 264 DGELPPNHEVRTAGAHLHLHNVQFEDSGTYQCEAVNSKGKDYHTALLSVEAFP 316
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 23/172 (13%)
Query: 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGI 156
+T A G N+T+ C P P+ +WKK DG + + R +L + V +DSG
Sbjct: 235 DTTALVGQNITLECFALGNPVPEIMWKKLDGELPPNHEVRTA--GAHLHLHNVQFEDSGT 292
Query: 157 YSCTATNVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y C A N G D L V P + E + + + + + S E +
Sbjct: 293 YQCEAVNSKGKDYHTALLSVEAFPEWVEHITNTEKDLGSRYTMSCVASGKPEPQIR---- 348
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
W NG EL +D + + +F D+G Y+CV ++ G +
Sbjct: 349 WMKNG---------EL------LDRDEMSFNSLTFEDSGMYQCVAENRHGVL 385
>gi|301760361|ref|XP_002915991.1| PREDICTED: contactin-6-like [Ailuropoda melanoleuca]
Length = 1028
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 240/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLFWECKASGKPNPLYTWLKNGERLNPE-------ERIQIENGTLVITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ + GG++TI C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRATISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G+ ++ G L+V +
Sbjct: 446 GMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKER-TVITI 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V +IW+ NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ N PI + I ART ++ W + + +G+ + L PW YEF+V+
Sbjct: 622 SDNNSPIQIFTIQARTPFSVGW-----QAVSTVPEILSGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS S T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMLRPVGSTAWTKERVPSVESSRF-VYRNESITPLSPFEVKVGVYNNEGEGSLSTVSIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 185/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+T C+ P T SW R E L R F+ ++ Y D Y
Sbjct: 425 GDITIECKPNAFPRATISWKRGME-------SLRQSKRVFLSEDGSLKIYNVTRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGVAKNTGSLVVKERTVITIPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ F+W +G++I FE G+L+I + + SG Y CT +
Sbjct: 530 EVVFIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + + I +G ++ +
Sbjct: 590 ADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGWQAVSTV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I + G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++ W E V E
Sbjct: 707 INGGGG----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTAW--TKERVPSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ + P S +E KV N G G S+ S Y+ D+P QAP
Sbjct: 760 RFVYRNES-----ITPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQQAPRGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW+ + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWKAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGAGPSSPPVNV 896
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SESEIILNCAASGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGNLAISSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNTLGTILSRKAKLQFAYIEDFETK-TRSAVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLFYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPDISWRRLDGNPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 318
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D+ Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLFYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + ++ + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSIKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DGN + G+ K ++ +L P ++D G Y C A N+ G + +KG+LI + P +E
Sbjct: 265 DGNPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDNLFWECKASGKP--NPLYTWLKNGER-----LNPEE--RIQIENGTLV 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>gi|126327110|ref|XP_001364316.1| PREDICTED: contactin-5 [Monodelphis domestica]
Length = 1015
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 235/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + +L I +N + D
Sbjct: 316 LDSGSALRWECKATGKPRPTYRWLKNG-------VPLLSQSRVEMVNGILMIHNVN-QSD 367
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ + Y+SA+L+VL P+F L+ +G V I C P+ +PKP
Sbjct: 368 AGMYQCLAENKYGSIYASAELKVLASAPAFALNQLKKTIIITKGQEVLIECKPQGSPKPT 427
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E + V P
Sbjct: 428 ISWKKGDKAVRESKRIAILPDGSLRILNASKSDEGKYICQGENVFGSAEILASVFVKE-P 486
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV++ WT G I + E+
Sbjct: 487 TRIELTPKRTELTVGESVVLNCKAIHDTSLDVSFYWTLKGQPIDFEKERGHFESIRAQAS 546
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +T+AT+ W
Sbjct: 547 SADLMIRNILLMHAGRYGCRVQTTADSVSDEADLLVRGPPGPPGIVIVEEITETTATLSW 606
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 607 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 661
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 662 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPANVSGRSGRRHELVIAWEPVSEEFQNGEG 721
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S +
Sbjct: 722 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSNI 780
Query: 480 VTI 482
V I
Sbjct: 781 VVI 783
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 129/325 (39%), Gaps = 31/325 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CEA G P Y W RNG ++ LE RY + + L I + +D
Sbjct: 30 DEKKVALNCEARGNPVPNYRWLRNGTEID-----LESDYRYSLIEGNLIISNPSEAKDSG 84
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC N L + S + +F R S EG V + C+P +P+ +
Sbjct: 85 HYQCLTANFLGSILSREAVLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 143
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 144 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 203
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + ++++ NG L
Sbjct: 204 LRNDGVMGEYEPKIEVHFPYMVTAAKGMTVKMECFALGNPVPTISWMKV-NGYIPSKARL 262
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
+ + G+LEI N DAG YEC +++ G+ S + + V P +
Sbjct: 263 RKSQ--------GVLEIPNVQLDDAGIYECRAENSRGRNSFRGQLQVYNYPHWVEKLNDT 314
Query: 289 EVHKTSATIQWTDGATNGRPITHYK 313
+ SA ++W AT G+P Y+
Sbjct: 315 HLDSGSA-LRWECKAT-GKPRPTYR 337
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 107/272 (39%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 139 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 194
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 195 VLSPPTPLTLRNDGVMGEYEPKIEVHFPYMVTAAKGMTVKMECFALGNPVPTISWMKVNG 254
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + + G L I V DD+GIY C A N G + +G+L V + P + E+L
Sbjct: 255 YIPSKARLRKSQ-GVLEIPNVQLDDAGIYECRAENSRGRNSFRGQLQVYNYPHWVEKL-N 312
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + L + + G+L I N
Sbjct: 313 DTHLDSGSALRWECKATGKP--RPTYRWLKNGVPL-------LSQSRVEMVNGILMIHNV 363
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + V+ P
Sbjct: 364 NQSDAGMYQCLAENKYGSIYASAELKVLASAP 395
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 340 TGRKEASIENVLVPWST-YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG--GG 396
TG E+SI + +T Y V A N GYG P+S + T P QAPS I
Sbjct: 843 TGGNESSIILTGLEGNTLYHLTVRAYNGAGYG-PASSEVRAATKKSPPSQAPSNIMWEQQ 901
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSE 455
G ++ S+ WEP+ + + YK+F+R++ + Q ET K AVV +P
Sbjct: 902 GSQV---SLGWEPVRPLANESEVVGYKVFYRQEGHSNSQVIETQKTQ-----AVVLLPDV 953
Query: 456 FYYTEYEVKVQAINDVGPGPESEVVTI 482
Y ++V+A ++ G G S + +
Sbjct: 954 GVYI---IEVRAFSEGGDGTASSQIRV 977
>gi|363738787|ref|XP_414433.3| PREDICTED: contactin-3 [Gallus gallus]
Length = 910
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/478 (33%), Positives = 236/478 (49%), Gaps = 17/478 (3%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NGE L+ E R I++ LTI LN D YQC
Sbjct: 217 LYWDCRASGKPKPSYRWLKNGEQLSVE-------GRIQIENGALTISSLN-LTDSGRYQC 268
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+LRV+ P F K P++ G V C P+A+PK + WKK
Sbjct: 269 IAENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKG 328
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + R + ++G L I+ V++ D+G Y+C ATN G L+V P+
Sbjct: 329 GEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATNQFGTASGTTNLVVTE-PTRIILA 387
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + + ++ L C + +LD+++ W NG D + E + G L+ I
Sbjct: 388 PSNMDVTVGESVILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLM-I 446
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+VK+ V +++ +IV G PG P V+V E+ T+A I W +G N
Sbjct: 447 RNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEITDTTAQISWQEGTDN 506
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+T Y I ART ++ W V+ D G + L PW YEF+V+A N
Sbjct: 507 HSPVTAYTIQARTPFSVGWQRVT-----TVPDVIDGNTFTTTVVDLNPWVEYEFRVVASN 561
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P P+ + GGGG +L I+W+P+P E QN Y +
Sbjct: 562 KIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVA 621
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S + T++
Sbjct: 622 FRPFGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSSITTVF 678
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P+ W++ + + NG + I ++D+G+Y C
Sbjct: 121 AAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRKSNGMIEIPNFQQEDAGLYECI 180
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
N G + ++GRL P ++ Q+ IA L C A + +Y W NG
Sbjct: 181 TENSRGKNIARGRLTYYAKP-HWIQMIKDTEIAVEDTLYWDCRASGKP--KPSYRWLKNG 237
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
++ I I+ G L I++ + D+G Y+C+ ++ G I S + V+ P
Sbjct: 238 EQLSVEG-------RIQIENGALTISSLNLTDSGRYQCIAENKHGVIYSSAELRVVASAP 290
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 185/496 (37%), Gaps = 58/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + GE L+ E++ ++D L I + + D Y C A N
Sbjct: 313 CKPKASPKARCSWKKGGEQLH------ENERITLLKDGGLRITNVT-KVDAGSYTCVATN 365
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q T + L V+T P + GE +V + C + P F W +G
Sbjct: 366 QFGTASGTTNL-VVTEPTRIILAPSNMDVTVGE--SVILPCQVQHDPILDISFTWYFNGT 422
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 423 LTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGP 482
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDG 240
E + ++ Q+ T+ V AY I +G + + P++ IDG
Sbjct: 483 PEHV--RVDEITDTTAQISWQEGTDNHSPVTAYTIQARTPFSVGWQRVTTV--PDV-IDG 537
Query: 241 GLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVE 289
T EYE V + +G K+ T+ V P + GG
Sbjct: 538 NTFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGG--- 594
Query: 290 VHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 595 -SRSELVITWDPIPEELQNGEGF-GYVVAFRPFGTTTW--IQTVVTSPDTPRYVFRNES- 649
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
++P+S YE KV N G G SS + ++ ++P APS + + +S
Sbjct: 650 ----ILPFSPYEVKVGVYNNKGEGPFSSITTVFSA-EEEPTVAPSGVSVTSLSSSVIEVS 704
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEF-YYTEYEVK 464
W+ +P + + + Y++ + E S +K GN I + + S YYT
Sbjct: 705 WKAIPWKMSSGRLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYT----A 760
Query: 465 VQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 761 VRAYNSAGAGPFSATV 776
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 92/242 (38%), Gaps = 24/242 (9%)
Query: 86 LKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIF-EN 141
+ P + + S EG V + C P A + F W + + + RR + E
Sbjct: 1 MDPESSRTKMRSTVSVREGQGVVLLCGTPPRAGELSFAWIFNEYPSFVQEDSRRFVSQET 60
Query: 142 GNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKIT 191
G+L I+ V D G Y+C T TN + ++ G P Q P +
Sbjct: 61 GHLYIAKVEPSDVGNYTCVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLP 120
Query: 192 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 251
A ++L C A + + + T + L + G++EI N
Sbjct: 121 AAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRK--------SNGMIEIPNFQQE 172
Query: 252 DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 311
DAG YEC+ +++ GK + + P ++ E+ T+ W D +G+P
Sbjct: 173 DAGLYECITENSRGKNIARGRLTYYAKPHWIQMIKDTEI-AVEDTLYW-DCRASGKPKPS 230
Query: 312 YK 313
Y+
Sbjct: 231 YR 232
>gi|197097634|ref|NP_001124558.1| contactin-6 precursor [Pongo abelii]
gi|55731108|emb|CAH92269.1| hypothetical protein [Pongo abelii]
gi|55731947|emb|CAH92682.1| hypothetical protein [Pongo abelii]
Length = 1028
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIECKPNAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 446 GTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTTKNTGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV PPG P V+V ++ T++ + W G
Sbjct: 562 LMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRAPPGPPEDVKVEDISSTTSQLSWRAG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 187/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIECKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTTKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + + SG Y CT +
Sbjct: 530 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRAPPGPPEDVKVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 INGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEVILNCAANGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAISSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>gi|149036846|gb|EDL91464.1| rCG56227 [Rattus norvegicus]
Length = 1041
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 237/482 (49%), Gaps = 23/482 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G P+ +Y+W +NGE LN+E +R ++ L I LN D +YQC
Sbjct: 346 LFWECKASGNPNPSYTWLKNGERLNTE-------ERIQTENGTLIITMLNVS-DSGIYQC 397
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE--GGNVTIFCNPEAAPKPKFVWK 124
A+N+ +T Y++A+LRVL P F K P++ GG+++I C P A PK WK
Sbjct: 398 AAENKYQTIYANAELRVLASAPDFSKNPIKKXXXXXXXXGGDISIECKPNAFPKASISWK 457
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ + R E+G+L I V+R D+G Y+C ATN G +S G LIV +
Sbjct: 458 RGTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVKER-TVIT 516
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---G 241
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 517 VPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVI---DLKKGVAHFERIGGESVG 573
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W
Sbjct: 574 DLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRP 633
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G N PI + I RT ++ W + + G+ + L PW YEF+V
Sbjct: 634 GPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGQTYNATVIGLSPWVEYEFRV 688
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+AGN +G GEPS PS T A P AP I GGGG +L I+WEP+P E QN
Sbjct: 689 VAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVITWEPIPEELQNGEGFG 748
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
Y I +R T + E + + + R S + +EVKV N+ G G S V
Sbjct: 749 YIIMFRPVGSTTWMKEKVALVESSKF-IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVSI 807
Query: 482 IW 483
++
Sbjct: 808 VY 809
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 187/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + +F++D L I + D Y
Sbjct: 438 GDISIECKPNAFPKASISWKRGTENLK------QSKRVFFLEDGSLKICNVT-RSDAGSY 490
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ SS L V+T+ PS + + GE ++ + C P
Sbjct: 491 TCVATNQFGNGKSSGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPTM 542
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 543 EVLFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAV 602
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 603 ADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV 662
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V + +G + TK ++ P
Sbjct: 663 --PEI-LNGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVN 719
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW + E V E
Sbjct: 720 INGGGG----SRSELVITWEPIPEELQNGEGF-GYIIMFRPVGSTTW--MKEKVALVESS 772
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++ R E+ ++P S +E KV N G G S+ S Y+ D+P AP
Sbjct: 773 KFIYRNES-----IMPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPRLAPRGTSVQS 826
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
D+ +SW + + + Y++ + N E ++ GNV I
Sbjct: 827 FSASDMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRA 884
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 885 NTIYFASVRAYNTAGTGPSSPPVNV 909
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 108/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ +C A G P Y W +NG ++ Y + L I ++D
Sbjct: 53 SRSEIILSCTASGYPSPHYRWKQNGTDID-----FSMTYHYRLDGGSLAISSPRTDQDIG 107
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
+YQC A N + T S F+ + S EG V + C P P F
Sbjct: 108 IYQCLATNPVGTILSRKAKLQFAYIEDFETKS-RSTVSVREGQGVVLLC----GPPPHFG 162
Query: 122 ----VWKKDGN--IIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + +N GNL I+ V D G Y+C TN +G
Sbjct: 163 ELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQGPP 222
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 223 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPMPG 282
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ + + LEI D G YECV + G+ K +I PP
Sbjct: 283 KVKYSNSQ--------ATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLIFYAPP 329
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 28/256 (10%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
+++Y W N L +++ R F+ N L I + P D Y C N+ R
Sbjct: 163 ELSYDW-----TFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPS-DVGNYTCFVTNKEAHR 216
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
L + P + R E+ A + +V + C P P W++
Sbjct: 217 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 275
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 276 DGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLI-FYAPPEWEQK 334
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ + +L C A + +Y W NG R+ + I + G L IT
Sbjct: 335 IQNTYLSIYDSLFWECKASGNP--NPSYTWLKNGERLNTEE-------RIQTENGTLIIT 385
Query: 247 NASFADAGEYECVVKS 262
+ +D+G Y+C ++
Sbjct: 386 MLNVSDSGIYQCAAEN 401
>gi|291392425|ref|XP_002712732.1| PREDICTED: contactin 1 [Oryctolagus cuniculus]
Length = 1076
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 244/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 417 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHRGELRLYD------------VTFENA--- 461
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 462 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 520
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + +G R I+E+G+L I+ ++R D G+Y+C A N G S G L++ P
Sbjct: 521 FSWSKGTEWLVNGSRILIWEDGSLEINNITRSDGGVYTCFAENNRGKANSTGTLVITD-P 579
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID- 239
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 580 TRIILAPLNADITVGENATMQCAASFDSALDLTFVWSFNGYVIDFNKENIHYQRNFMLDN 639
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ +V TS + W
Sbjct: 640 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDVRATSVALTW 699
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + + G EA+ L+PW YEF
Sbjct: 700 SRGSDNHSPISKYTIQTKTQLSDGWKDAK-----TDPPIIEGNMEAAKAVDLIPWMEYEF 754
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 755 RVVATNTLGLGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 814
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + S T ++VKV+A N G GP S +
Sbjct: 815 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDESMSPSTAFQVKVKAFNSKGDGPYSLI 873
Query: 480 VTI 482
I
Sbjct: 874 AVI 876
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 116 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 174
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+G+Y C A+N +GM S + Y + P P++ + + + L
Sbjct: 175 INNPDKQKDAGVYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 231
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 232 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDKGNYSCF 287
Query: 260 VKS 262
V S
Sbjct: 288 VSS 290
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 102/259 (39%), Gaps = 34/259 (13%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 242 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKS 296
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 297 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 356
Query: 130 IGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ S +I +G +L I + +D G+Y C A N+ G D+ + ++ V P + E +
Sbjct: 357 MPSTA--EISTSGAVLKIINIQLEDEGLYECEAENIRGRDKHQAKIYVQAFPEWVEHI-N 413
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ +L C A + + + W NG G L + +
Sbjct: 414 DTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHR---------------GELRLYDV 456
Query: 249 SFADAGEYECVVKSTVGKI 267
+F +AG Y+C+ ++T G I
Sbjct: 457 TFENAGMYQCIAENTHGAI 475
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 118/524 (22%), Positives = 197/524 (37%), Gaps = 79/524 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P +SW + E L + + L +D +N+ D +Y C A+N
Sbjct: 511 CKPKAAPKPKFSWSKGTEWLVNGSRILIWEDGSLEINNIT-------RSDGGVYTCFAEN 563
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
S+ L V+T PL ++ GE + + ++A FVW +G +I
Sbjct: 564 NRGKANSTGTL-VITDPTRIILAPLNADITVGENATMQCAASFDSALDLTFVWSFNGYVI 622
Query: 131 GSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
++ NG LLI +G Y+CTA + + L+V P
Sbjct: 623 DFNKENIHYQRNFMLDNNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPP 682
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
L +I ++ L S ++ ++ ++ + + P I I+G +
Sbjct: 683 GGL--RIEDVRATSVALTWSRGSDNHSPISKYTIQTKTQLSDGWKDAKTDPPI-IEGNME 739
Query: 244 EITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHK 292
EYE V +T+G KI T P + GG
Sbjct: 740 AAKAVDLIPWMEYEFRVVATNTLGLGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----SN 795
Query: 293 TSATIQWTDGATNGRPIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
TI W P++ HY I+A ++ W V+ V + RY +
Sbjct: 796 RELTITWA-------PLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 846
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E+ + P + ++ KV A N G G P S N+ D P +AP+ +G ++
Sbjct: 847 ES-----MSPSTAFQVKVKAFNSKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLSSSEI 900
Query: 404 SISWEP-LPREKQNAPNIYYKIFWRKKNDTEFQSETLK----EYGNVGIAVVRIPSEFYY 458
S+ W+ L + +N Y+I + +D E + ++ EY R+ +
Sbjct: 901 SVHWKHVLEKIVEN-----YQIRYWAAHDKEAAAHRVQVSSQEYS------ARLENLLPD 949
Query: 459 TEYEVKVQAINDVGPGPESEVVTIW------HDPLVIISYVCQG 496
T+Y V+V A N G GP S+V+ + P IIS V G
Sbjct: 950 TQYFVEVGACNSAGCGPSSDVIDTFTKKAPPSQPPRIISSVRSG 993
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 133 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 184
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 185 GVYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 241
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 242 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKSVFSKF 301
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 302 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 352
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ G+ + + V+ P +
Sbjct: 353 VLEPMPSTAEISTSGAVLKIINIQLEDEGLYECEAENIRGRDKHQAKIYVQAFPEWVEHI 412
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 413 NDTEV-DIGSDLYWPCVAT-GKPI 434
>gi|291394024|ref|XP_002713237.1| PREDICTED: contactin-3-like [Oryctolagus cuniculus]
Length = 1079
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 249/498 (50%), Gaps = 21/498 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 335 NLHWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 386
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V + C P A+P+ WK+
Sbjct: 387 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSVVNLDCKPRASPRALSSWKR 446
Query: 126 DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
++ R + E+G L I+ V++ D+G+Y+CTA N G L+V P+
Sbjct: 447 GDTMVQEHDRYWVLPEDGRLKITNVTKADTGMYTCTAENQFGKANGTTHLVVTE-PTRIT 505
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLL 243
P + ++ ++ L C + LLD+ + W NGV D + E + G L+
Sbjct: 506 LAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGVLTDFKKDGSHFEKVGGSSSGDLM 565
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C+V++ V +S+ +IV G PG P V+VVE+ T+A + W +G
Sbjct: 566 -IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVVEITDTTAQLSWEEGT 624
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 625 DNHSPIITYSIQARTPFSVGWQAVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVA 679
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y
Sbjct: 680 SNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYV 739
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ +R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 740 VAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPFSPYEVKVGVYNNRGEGPFSPVATVF 798
Query: 484 ---HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 799 SAEEEPTVAPSQVSANSL 816
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 97 SETY-AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDS 154
SET A +G V + C P P+ W++ DG S + + F NG L I ++D+
Sbjct: 235 SETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDT 293
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A N G + ++GRL P ++ QL + IA NL C A + +Y
Sbjct: 294 GSYECIAENSRGKNVARGRLTYYAKP-HWVQLIRDVEIAVEDNLHWECRASGKP--KPSY 350
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTT 272
W NG + L E I I+ G L I+N + D+G ++C+ ++ G + S +
Sbjct: 351 RWLKNG---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELK 403
Query: 273 VIVEGP 278
V+ P
Sbjct: 404 VVASAP 409
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 114/277 (41%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T TCEA G P Y W NG ++ + + RY + L + +NP R D Y
Sbjct: 47 ITLTCEARGNPSPHYRWQLNGSDID-----MSMEHRYKLNGGNLVV--INPNRNWDTGSY 99
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 100 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 157
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR--LIVL 177
+++ + + + RR + E G+L I+ V D G Y+C T+ G +VL
Sbjct: 158 WIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVL 217
Query: 178 HGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ PKI + A ++L C A + + + + + L
Sbjct: 218 RSDGVMGEYEPKIEVQFSETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLR 277
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N D G YEC+ +++ GK
Sbjct: 278 KF--------NGVLEIPNFQQEDTGSYECIAENSRGK 306
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 187/501 (37%), Gaps = 67/501 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRA 68
C+ P SW R ++ ++ DRY++ +D L I + + D MY C A
Sbjct: 432 CKPRASPRALSSWKRGDTMV-------QEHDRYWVLPEDGRLKITNVT-KADTGMYTCTA 483
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW--- 123
+NQ + L V+T P + GE +V + C + P F W
Sbjct: 484 ENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFN 540
Query: 124 ------KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
KKDG+ G +G+L+I + SG Y C S LIV
Sbjct: 541 GVLTDFKKDGSHFEKVGGSS---SGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVR 597
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPN 235
P E + K+ QL T+ + I +G + + P
Sbjct: 598 GSPGPPENV--KVVEITDTTAQLSWEEGTDNHSPIITYSIQARTPFSVGWQAVTTV--PE 653
Query: 236 INIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGG 284
+ IDG T EYE V + +G K+ T+ V P + GG
Sbjct: 654 V-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGG 712
Query: 285 VQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
++ I W + NG Y + R +TW + V + RY
Sbjct: 713 GG----SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVF 765
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
R E+ +VP+S YE KV N G G P SP + ++P APS++
Sbjct: 766 RNES-----IVPFSPYEVKVGVYNNRGEG-PFSPVATVFSAEEEPTVAPSQVSANSLSSS 819
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYT 459
++ +SW +P + N + Y++ + + E S +K GN A +R + S YYT
Sbjct: 820 EIEVSWNTVPWKLSNGHLLGYEVRYWNNGEEEDLSSKVKVAGNETSARLRGLKSNLAYYT 879
Query: 460 EYEVKVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 880 ----AVRAYNSAGAGPFSTTV 896
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFEN 141
V +PS P++SE +T+ C P P + W+ +G+ I S R
Sbjct: 28 VFIKEPSNSIFPVDSE-----DKKITLTCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNG 82
Query: 142 GNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 83 GNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVV 142
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 143 LLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYT 196
Query: 258 CVVKSTV 264
CVV STV
Sbjct: 197 CVVTSTV 203
>gi|121583914|ref|NP_001073520.1| contactin 4 precursor [Danio rerio]
gi|115313841|gb|AAI24395.1| Zgc:153573 [Danio rerio]
Length = 1028
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 236/482 (48%), Gaps = 21/482 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P +Y W +NGE L P E+ R + + L+I +L D MYQ
Sbjct: 335 SLVWECKATGKPKPSYRWMKNGENLE----PTEE--RVQVINGALSITHL-ALSDIGMYQ 387
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ YS+A+LRV+ + P F + L+S T EGG+V I C P+ +P+ W+K
Sbjct: 388 CVAGNKYGEVYSNAELRVIAVAPDFSQNQLKSHTLVKEGGDVLIECKPKMSPRGSISWRK 447
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ + R + E+G+L IS VS+ D+G Y+C A N G S G L+V P+
Sbjct: 448 GNDALRESSRIAVLESGSLRISNVSKSDAGSYTCVARNQFGEASSLGNLLVKE-PTIITT 506
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLL 243
P + + ++ L C + L++ + W N + G+ E G +
Sbjct: 507 APNTLDVTVGESIILPCQVSYDPSLELKFTWFFNEQLIHFGSHG-GYFEKVGGQHSAGDI 565
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N AG+Y C V++ V S T +IV GPPG P + V E+ T+AT+ W G
Sbjct: 566 MIRNIQLRHAGKYTCAVQTKVDSSSIATDLIVRGPPGPPTSIHVEEITDTTATLSWRPGP 625
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
N PIT Y I ART ++ W VS V+G G + L PW YEF+V
Sbjct: 626 DNHSPITAYTIQARTPFSLGWQAVSTVPEVVG-------GSHLTATVIELNPWVEYEFRV 678
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+A N +G GEPS PS + T P P+ + GGGG +L I+WEP+P E QN
Sbjct: 679 LASNAVGTGEPSKPSKKARTKDTVPKVTPANVSGGGGSRSELVITWEPVPEELQNGAGFG 738
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
Y + +R T + + V + + ++ ++VKV A N+ G GP V+T
Sbjct: 739 YVVAFRPFGSTGWMQAAVPS-PEASKYVFKNETILPFSPFQVKVGAYNNKGEGPFGPVIT 797
Query: 482 IW 483
I+
Sbjct: 798 IY 799
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 129/327 (39%), Gaps = 30/327 (9%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
M+ ++ ++CEA G P Y W NG ++N + + + L I +LN + D
Sbjct: 41 MEKSREVVFSCEAQGDPPPFYRWKLNGSVVNP-----KPGSHHSLTGGNLRINHLNKDMD 95
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAP 117
YQC A N T S +FK S EG V + C P A
Sbjct: 96 AGTYQCLASNSFGTIVSREASLTFAYLENFKTHK-RSSVSVREGQGVVLLCGPPPHSGAL 154
Query: 118 KPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+++ + +I+ RR + E GNL I+ V D G Y+C TN + +G
Sbjct: 155 TFSWIFNEYPSIVKQDSRRFVSQETGNLYIAKVEPSDVGNYTCVVTNTVTKTQVQGPPTP 214
Query: 177 L----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L + P Q P + +A ++L C A + +++ +
Sbjct: 215 LILRTDGVMGEYEPKIEVQFPEVVQVAKGSTVRLECFALGNPVPSISWRRVDGVPFARKV 274
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D+ + G++EI DAG YECV +++ G+ S + + P L Q
Sbjct: 275 DVRK--------TSGVMEIPYFQQEDAGTYECVAENSKGRNSVQGKLSFFASPQLIEKPQ 326
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYK 313
V+ ++ W AT G+P Y+
Sbjct: 327 DVQ-KPIDDSLVWECKAT-GKPKPSYR 351
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 114/508 (22%), Positives = 187/508 (36%), Gaps = 65/508 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P + SW + + L E ++ L I ++ + D Y
Sbjct: 427 GDVLIECKPKMSPRGSISWRKGNDALR------ESSRIAVLESGSLRISNVS-KSDAGSY 479
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSF-KKRPLESETYAGEGGNVTIFCNPEAAP--KPKF 121
C A+NQ S L L +P+ P + GE ++ + C P + KF
Sbjct: 480 TCVARNQFGEASSLGNL--LVKEPTIITTAPNTLDVTVGE--SIILPCQVSYDPSLELKF 535
Query: 122 VWKKDGNIIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + +I G FE G+++I + +G Y+C L
Sbjct: 536 TWFFNEQLIHFGSHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDL 595
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
IV P + + L R + I +G ++ + P
Sbjct: 596 IVRGPPGPPTSIHVEEITDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQAVSTV--P 653
Query: 235 NINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPG 283
+ + G L T EYE + + VG K TK TV P + G
Sbjct: 654 EV-VGGSHLTATVIELNPWVEYEFRVLASNAVGTGEPSKPSKKARTKDTVPKVTPANVSG 712
Query: 284 GVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 336
G ++ I W +GA G + ++ T W + V E
Sbjct: 713 GGG----SRSELVITWEPVPEELQNGAGFGY-VVAFRPFGSTGW------MQAAVPSPEA 761
Query: 337 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 396
+Y + E ++P+S ++ KV A N G G P P + ++P +APSR+
Sbjct: 762 SKYVFKNET-----ILPFSPFQVKVGAYNNKGEG-PFGPVITIYSAEEEPGRAPSRLRAK 815
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPS 454
D+ +SW+ LP + Y++ + +KN+ E S L+ GN +A+++ S
Sbjct: 816 SLSASDVEVSWKALPWSTSKKRVLGYELRYWEKNEKEDASSVLRTVGNRTLAIIQGLKGS 875
Query: 455 EFYYTEYEVKVQAINDVGPGPESEVVTI 482
YY + V+A N G GP S VV I
Sbjct: 876 STYY----ITVRAYNTAGTGPPSPVVNI 899
>gi|47227363|emb|CAF96912.1| unnamed protein product [Tetraodon nigroviridis]
Length = 786
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 228/463 (49%), Gaps = 17/463 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+A+L W C+A G P +YSW +NGE + +E R I + L+I LN D M
Sbjct: 181 EANLFWECKANGKPKPSYSWLKNGEQVAAE-------GRIQIDNGALSIAVLN-LSDSGM 232
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ YSSAQL VL P+F K PL++ A G VT+ C PEA P +W
Sbjct: 233 YQCVAENKHGIIYSSAQLMVLASPPNFSKSPLKALLKARSGSEVTLECKPEAWPPAISLW 292
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK I+ R + NG + I+ +R D+G Y+C A N G + G+L++ P+
Sbjct: 293 KKGNEILPRTERINLLPNGTIKIANATRQDAGSYTCIAKNQFGTASTTGKLLITE-PTRI 351
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P I + L C + LDV++ W NG I D N E ++ G L
Sbjct: 352 TMRPTNTEIIVGESAVLPCQIAFDPALDVSFSWAFNGQLIDFQRDGNHFERVGGSVSGDL 411
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N + G+Y C++ + V +ST ++V+GPPG P V V E+ ++A + WT G
Sbjct: 412 M-IRNIQLSHGGKYVCLIDTDVESLSTSAILVVKGPPGPPDKVTVEEITDSTAQLSWTPG 470
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
NG PIT Y I ART + W + + G + L W YEF+V+
Sbjct: 471 RDNGSPITGYIIQARTPFTVGW-----QAVDTVPEVINGNMLTATVVGLNAWVEYEFRVV 525
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS S + T P AP+ +GGGGG +L I+WEP+P E QN Y
Sbjct: 526 ARNAVGLGEPSPASAKTRTEDSIPDTAPTDVGGGGGTKSELVITWEPVPEELQNGEGFGY 585
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
I +R + + G V V R + ++ +EVKV
Sbjct: 586 IIAFRPLGMVTWTRAAISTPG-VARYVFRNDTIPAFSPFEVKV 627
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 27/275 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
++TY+W + N ++ R FI ++ ER D Y C N +
Sbjct: 1 ELTYAW-----IFNEYPHFVQQDSRRFISQETGSLYIAKVERSDVGNYTCVVNNTVTGDK 55
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ L L+ P + ES A E V + C P P+ W++
Sbjct: 56 VLSSPTPLVLRSDGVMGEYEPKIEVHFPESVPAAKESA-VKLECFALGNPVPEISWRRTS 114
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
I + N L I ++D+G Y C A N G + ++GRL H ++ Q
Sbjct: 115 GIPFPSKVKMKNSNAVLEIPNFQQEDAGTYECVAENRRGKNAARGRL-SFHAKPHWLQTM 173
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
++ NL C A+ + +Y W NG ++ I ID G L I
Sbjct: 174 ADTALSIEANLFWECKANGKP--KPSYSWLKNGEQVAAEG-------RIQIDNGALSIAV 224
Query: 248 ASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGL 281
+ +D+G Y+CV ++ G I S+ +++ PP
Sbjct: 225 LNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPNF 259
>gi|432859229|ref|XP_004069076.1| PREDICTED: contactin-4-like [Oryzias latipes]
Length = 1011
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 233/482 (48%), Gaps = 21/482 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P +Y W +NGE L S ++R + + VL+I L D MYQ
Sbjct: 302 SLVWECKATGKPKPSYRWMKNGENLES------TEERIQVANGVLSISRLTLS-DTGMYQ 354
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ YS+A+LRV+ P F L S+T GG++ + C P+ +P W+K
Sbjct: 355 CVAGNKHGEVYSNAELRVIAAAPDFSHNQLRSQTMVKVGGDMLVECRPKMSPWGVISWRK 414
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R I +NG+L I V++ D+G+Y+C A N GM S G + V Q
Sbjct: 415 GSEPLQQSNRIVILDNGSLRIWNVTKSDAGLYTCVARNQFGMASSTGSVTVKEASVITTQ 474
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLL 243
P + ++ L C + L++ + W N + G+ D E G +
Sbjct: 475 -PSTLDATVGESVVLPCQVSHDPSLELKFTWFFNEQLIHFGSHD-GFFEKVGGQHSAGDI 532
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N AG+Y C V++ V IS +IV GPP P +QV E+ T+A++ W G
Sbjct: 533 MIRNIQLKHAGKYTCAVQTKVDSISVALDLIVRGPPAPPTHIQVEEITDTTASLSWRPGP 592
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
N PIT Y I ART ++ W V+ V+G GR+ ++ L PW YEF+V
Sbjct: 593 DNHSPITAYTIQARTPFSLGWQAVTTVPEVVG-------GRQLTAVVIDLNPWVEYEFRV 645
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+A N +G GEPS PS Q T + P P+ + GGGG +L I+WEP+P E QN P
Sbjct: 646 LASNRIGTGEPSKPSKQARTKSTSPKVTPANVSGGGGSRSELVITWEPVPEELQNGPGFG 705
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
Y + +R T + + V + S ++ + VKV N+ G GP V+T
Sbjct: 706 YVVAFRPHGATGWMQAAVPS-PEASRYVFKNESIQPFSPFHVKVGVYNNEGEGPFGPVIT 764
Query: 482 IW 483
I+
Sbjct: 765 IY 766
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 33/264 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-KT 74
D+ +SW + N T ++ + R FI L I + P D Y C N + KT
Sbjct: 120 DLVFSW-----IFNESTTFVQQETRRFISQETGNLYIAKVEPS-DVGNYTCVVTNTVTKT 173
Query: 75 RYSSAQ----LRVLTLKPSFKKRPLESE----TYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
R LR + ++ + +E + + +G V + C P P W+++
Sbjct: 174 RVQGPSTPLVLRSDGVMGEYEPK-IEVQFPEIVHVAKGSTVKLECFALGNPAPSITWRRE 232
Query: 127 GNIIGSGGRRKI---FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G+ RK+ NG L I +DD G Y C A N GM++ KG+L + P +
Sbjct: 233 D---GAPFPRKVDTRKTNGVLEIPYFQQDDVGTYECVAENSRGMNKVKGKL-SFYAPPHL 288
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ P + +L C A + +Y W NG N++ E I + G+L
Sbjct: 289 IEKPQDVQKLIDDSLVWECKATGKP--KPSYRWMKNG---ENLESTE---ERIQVANGVL 340
Query: 244 EITNASFADAGEYECVVKSTVGKI 267
I+ + +D G Y+CV + G++
Sbjct: 341 SISRLTLSDTGMYQCVAGNKHGEV 364
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 133/363 (36%), Gaps = 41/363 (11%)
Query: 20 TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79
T+ W NG +E LP + + + L I LN +RD YQC A N T S
Sbjct: 27 TFEWKLNG----TEILP-KAGSHFSLSGGNLRISRLNRDRDAGTYQCLASNSFGTIVSRE 81
Query: 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRR 136
SFK + S EG + + C P +++ + + RR
Sbjct: 82 ASLTFAYLESFKTQ-RRSPVSVREGQGMVLLCGPPPHSGDLVFSWIFNESTTFVQQETRR 140
Query: 137 KIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQ 185
I E GNL I+ V D G Y+C TN +G L + P Q
Sbjct: 141 FISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPSTPLVLRSDGVMGEYEPKIEVQ 200
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P + +A ++L C A + W G +++T N G+LEI
Sbjct: 201 FPEIVHVAKGSTVKLECFALGNPAPSIT--WRRED---GAPFPRKVDTRKTN---GVLEI 252
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
D G YECV +++ G K + PP L Q V+ ++ W AT
Sbjct: 253 PYFQQDDVGTYECVAENSRGMNKVKGKLSFYAPPHLIEKPQDVQ-KLIDDSLVWECKAT- 310
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
G+P Y+ W E++ E SI + + T ++ +AGN
Sbjct: 311 GKPKPSYR----------WMKNGENLESTEERIQVANGVLSISRLTLS-DTGMYQCVAGN 359
Query: 366 ELG 368
+ G
Sbjct: 360 KHG 362
>gi|395520400|ref|XP_003764321.1| PREDICTED: contactin-5 [Sarcophilus harrisii]
Length = 1015
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 316 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLLAQSRVEMVNGVLMIHNVN-QSD 367
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ + Y+SA+L+VL P F L+ +G V I C P+ +PKP
Sbjct: 368 AGMYQCLAENKYGSIYASAELKVLASAPVFALNQLKKTIIITKGQEVLIECKPQGSPKPT 427
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E + V P
Sbjct: 428 ISWKKGDKAVRESKRIAILPDGSLRILNASKPDEGKYICRGENVFGSAEILASVFVKE-P 486
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P KI + ++ L C A + LDV++ WT G I + E+
Sbjct: 487 TRIELTPKKIELTVGESIVLNCKAIHDASLDVSFYWTLKGQPIDFEKERGHFESIRAQAS 546
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ ++AT+ W
Sbjct: 547 SADLMIRNILLMHAGRYGCRVQTTADSVSDEADLLVRGPPGPPGIVIVEEITDSTATLSW 606
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 607 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVEYEF 661
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 662 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPANVSGRSGRRHELVIAWEPVSEEFQNGEG 721
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S +
Sbjct: 722 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSNI 780
Query: 480 VTI 482
V I
Sbjct: 781 VVI 783
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 112/282 (39%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CEA G P Y W RNG L+ LE RY + + L I + +D
Sbjct: 30 DEKKVALNCEARGNPVPNYRWLRNGTELD-----LESDYRYSLIEGNLIINNPSEAKDAG 84
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC N L + S + +F R S EG V + C+P +P+ +
Sbjct: 85 HYQCLTANSLGSILSREAILQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 143
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 144 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 203
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + ++++ NG L
Sbjct: 204 LRNDGVMGEYEPKIEVHFPFMVTAAKGMTVKMECFALGNPVPTISWMKV-NGYIPSKARL 262
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + G+LEI N DAG YEC +++ G+ S +
Sbjct: 263 RKSQ--------GVLEIPNVQLDDAGIYECRAENSRGRNSFR 296
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 107/272 (39%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 139 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 194
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 195 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGMTVKMECFALGNPVPTISWMKVNG 254
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + + G L I V DD+GIY C A N G + +G+L V + P + E+L
Sbjct: 255 YIPSKARLRKSQ-GVLEIPNVQLDDAGIYECRAENSRGRNSFRGQLQVYNYPHWVEKL-N 312
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + L + + G+L I N
Sbjct: 313 DTHLDSGSPLRWECKATGKP--RPTYRWLKNGVPL-------LAQSRVEMVNGVLMIHNV 363
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + V+ P
Sbjct: 364 NQSDAGMYQCLAENKYGSIYASAELKVLASAP 395
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 340 TGRKEASIENVLVPWST-YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG--GG 396
TG E+SI + +T Y V A N GYG PSS + T P QAPS I
Sbjct: 843 TGGNESSIILTGLEGNTLYHLTVRAYNGAGYGPPSS-EVRAATKKSPPSQAPSNIMWEQQ 901
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSE 455
G ++ S+ WEP+ + + YK+F+R++ + Q ET K AVV +P
Sbjct: 902 GSQV---SLGWEPVRPLANESEVVGYKVFYRQEGHSNSQVIETEKTQ-----AVVLLPDV 953
Query: 456 FYYTEYEVKVQAINDVGPGPESEVVTI 482
Y ++V+A ++ G G S + +
Sbjct: 954 GVYI---IEVRAFSEGGDGTASSQIRV 977
>gi|345323035|ref|XP_003430665.1| PREDICTED: contactin-5 [Ornithorhynchus anatinus]
Length = 1023
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/483 (32%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P T W +NG LPL Q + + +L I +N + D
Sbjct: 324 LDSGSPLRWECKAIGKPRPTVRWLKNG-------LPLWPQSGIEMVNGILMIHNVN-QSD 375
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ T Y++A+L++L P+F L+ +G V I C P+A+PKP
Sbjct: 376 AGMYQCLAENKYGTIYANAELKILASAPTFALNQLKQTIVITKGQEVIIECKPQASPKPT 435
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R + +G+L I S+ D G Y C NV G E + V P
Sbjct: 436 ISWKKGDKAVRESKRTAVLPDGSLRILNASKYDEGKYICQGENVFGSAEFIASVFVKE-P 494
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I D E+
Sbjct: 495 TRIELAPKRTELTVGESIVLSCKAIHDPSLDVTFYWTLKGQPIDFEKDGGHFESIRAQAS 554
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ + +AT+ W
Sbjct: 555 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGSPGIVIVEEITENTATLSW 614
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ GA N PIT Y + AR+ ++ W + D TG E+++ L PW YEF
Sbjct: 615 SPGADNHSPITAYNLQARSPFSLGW-----QTVKTVPDVITGDMESAMAVDLNPWVEYEF 669
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 670 RVVATNPIGTGDPSAPSRMIRTNEAVPKTAPANVSGRSGRRHELVIAWEPVSEEFQNGEG 729
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S +
Sbjct: 730 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSHI 788
Query: 480 VTI 482
V I
Sbjct: 789 VVI 791
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 112/282 (39%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CEA G P Y W RNG ++ LE RY + + I + +D
Sbjct: 38 DEKKVALDCEARGDPAPNYRWLRNGTEID-----LESDYRYSLIEGNFIISSPSEAKDSG 92
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N + S + +F R S EG V + C+P +P+ +
Sbjct: 93 SYQCLASNTFGSILSREAILQFAYLRNFSGR-TRSAVSVREGQGVVLICSPPPHSPEISY 151
Query: 122 VW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I ++ GNL IS V D G Y C T TN +
Sbjct: 152 SWVFNEFPSFVAEDSRRFISQDTGNLYISKVQAADVGSYICLVKNTVTNARVLSPPTPLT 211
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + ++++ NG L
Sbjct: 212 LRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPVPTISWVKV-NGYIPSKARL 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + G+LEI N DAG YEC +++ G+ S +
Sbjct: 271 RKSQ--------GVLEIPNVQLDDAGMYECRAENSRGRNSFR 304
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 100/259 (38%), Gaps = 23/259 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P+++YSW N + ED R+ QD D Y C KN +
Sbjct: 147 PEISYSWVFN----EFPSFVAEDSRRFISQDTGNLYISKVQAADVGSYICLVKNTVTNAR 202
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 203 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPVPTISWVKVNG 262
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + G L I V DD+G+Y C A N G + +G+L V P + E+L
Sbjct: 263 YIPSKARLRK-SQGVLEIPNVQLDDAGMYECRAENSRGRNSFRGQLQVFTYPHWVERL-N 320
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + V W NG+ + I + G+L I N
Sbjct: 321 DTHLDSGSPLRWECKAIGKPRPTVR--WLKNGLPLWPQS-------GIEMVNGILMIHNV 371
Query: 249 SFADAGEYECVVKSTVGKI 267
+ +DAG Y+C+ ++ G I
Sbjct: 372 NQSDAGMYQCLAENKYGTI 390
>gi|327266146|ref|XP_003217867.1| PREDICTED: contactin-3-like [Anolis carolinensis]
Length = 920
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 238/479 (49%), Gaps = 17/479 (3%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NG+ PL + R I++ L I LN D +YQ
Sbjct: 227 NLYWECRASGKPKPSYRWLKNGD-------PLTIEGRIQIENGALIITNLN-LTDSGIYQ 278
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ T YSSA LRV+ P F K P++ G C P+A+P+ WKK
Sbjct: 279 CVAENKHGTIYSSADLRVVASAPDFSKNPMKKLLQLLMGSTAHFECKPKASPRAMITWKK 338
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G ++ R + ++G L I+ VS+ D+G Y+C A N G S L+V P+
Sbjct: 339 GGELLQENERISLLKDGGLRIANVSKSDAGSYTCLAENQFGKASSSTSLLVTE-PTRITL 397
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + + ++ L C + LLDV++ W N D + E + G L+
Sbjct: 398 APSNMDVTVGESVILPCQVQHDPLLDVSFTWYFNSALTDFRKDASHFERVGGSASGDLM- 456
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C VK+ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 457 IRNIQLKHSGKYVCTVKTEVDSVSSAAELIVRGSPGPPENVKVDEITATTAWLSWYEGLD 516
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+T Y + ART ++ W V+ + + +D G+ + L PW YEF+++A
Sbjct: 517 NHSPVTGYTVQARTPFSVGWQRVT--TVPEVID---GKTFTATAVDLNPWVEYEFRIVAS 571
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 572 NKIGGGEPSLPSEKVRTKEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 631
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R + + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 632 AFRPLGVSTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSSVATVY 689
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DGN S + NG + I ++D+G+Y C
Sbjct: 132 AAKGSTVKLECFALGNPVPRINWRRTDGNPFPSKVMLRK-SNGMIEIPNFQQEDAGLYEC 190
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
N G + ++GRL P ++ QL A NL C A + +Y W N
Sbjct: 191 ITENSRGKNIARGRLTYYAKP-HWVQLIKDFEAAVEDNLYWECRASGKP--KPSYRWLKN 247
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G D +E I I+ G L ITN + D+G Y+CV ++ G I S V+
Sbjct: 248 G------DPLTIEG-RIQIENGALIITNLNLTDSGIYQCVAENKHGTIYSSADLRVVASA 300
Query: 278 P 278
P
Sbjct: 301 P 301
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 178/497 (35%), Gaps = 60/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P +W + GELL E++ ++D L I ++ + D Y C A+N
Sbjct: 324 CKPKASPRAMITWKKGGELLQ------ENERISLLKDGGLRIANVS-KSDAGSYTCLAEN 376
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW 123
Q SS L V +TL PS + GE +V + C + P F W
Sbjct: 377 QFGKASSSTSLLVTEPTRITLAPS------NMDVTVGE--SVILPCQVQHDPLLDVSFTW 428
Query: 124 KKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+ + FE +G+L+I + SG Y CT S LIV
Sbjct: 429 YFNSALTDFRKDASHFERVGGSASGDLMIRNIQLKHSGKYVCTVKTEVDSVSSAAELIVR 488
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P E + A L + + +G + + P +
Sbjct: 489 GSPGPPENVKVDEITATTAWLSWYEGLDNHSPVTGYTVQARTPFSVGWQRVTTV--PEV- 545
Query: 238 IDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQ 286
IDG T EYE V + +G K+ TK V P + GG
Sbjct: 546 IDGKTFTATAVDLNPWVEYEFRIVASNKIGGGEPSLPSEKVRTKEAVPEVPPSEVSGGGG 605
Query: 287 VVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
++ I W + NG Y + R STW + V + RY R
Sbjct: 606 ----SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVSTW--IQTVVTSPDTPRYVFRN 658
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E+ ++P+S YE KV N G G SS + Y+ ++P APS + +
Sbjct: 659 ES-----ILPFSPYEVKVGVYNNKGEGPFSSVATVYSA-EEEPTVAPSGVAASSLSSSVI 712
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
+SW +P + + + Y++ + E S +K GN VRI Y
Sbjct: 713 EVSWISIPWKMSSGRLLGYEVRYWNNGGKEQSSNRVKAIGNE--TSVRITGLKSNLVYFT 770
Query: 464 KVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 771 AVRAYNSAGAGPFSATV 787
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 25/204 (12%)
Query: 80 QLRVLTLKPSFK---KRPLESETYAGEGGNVTIFCNPE---AAPKPKFVWKKDGNIIGSG 133
Q + TL PS+ K + S EG V + C P +++ + + +
Sbjct: 3 QPSISTLHPSYPENLKTKMRSTVSVREGQGVVLLCGPPTHYGEFSYAWIFNEYPSFVQED 62
Query: 134 GRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG------PSY 182
RR + E G+L I+ V D G Y+C T TN H + ++ G P
Sbjct: 63 SRRFVSQETGHLYIAKVESSDVGNYTCVVTSTVTNSHSLGSPTPLVLRTDGVMGEYEPKI 122
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
Q P + A ++L C A + + + T + L + G+
Sbjct: 123 EVQFPETLPAAKGSTVKLECFALGNPVPRINWRRTDGNPFPSKVMLRK--------SNGM 174
Query: 243 LEITNASFADAGEYECVVKSTVGK 266
+EI N DAG YEC+ +++ GK
Sbjct: 175 IEIPNFQQEDAGLYECITENSRGK 198
>gi|330688421|ref|NP_001178388.1| contactin-6 precursor [Bos taurus]
Length = 1030
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 241/483 (49%), Gaps = 27/483 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G PD Y+W +NGE LN + +R I++ L I LN D +YQC
Sbjct: 335 LFWECKASGKPDPWYTWLKNGERLNLD-------ERIQIENGTLIITMLNVS-DSGIYQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + Y++A+LRVL P F K PL+ + GG++ I C P A P+ WK+
Sbjct: 387 AAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISWKRG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + E+G+L I V+R D+G+Y+C ATN G+ ++ G LI+ +
Sbjct: 447 IESLRQSKRVFLLEDGSLKIYNVTRSDAGLYTCIATNQFGVAKNTGSLIIKER-TVITVP 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 243
P + + ++ L C + +DV ++W+ NG I D + I G G L
Sbjct: 506 PSTMDVTVGESIVLPCQVSRDPSVDVVFVWSFNGDVI---DFKKGMAHFERIGGESVGDL 562
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C VK+T+ +S +IV GPPG P V+V + T+ + W G+
Sbjct: 563 MIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPGPPEDVRVKHISSTTCQLSWRPGS 622
Query: 304 TNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
N PI + I ART ++ W VS E + GK + A++ L PW YEF+
Sbjct: 623 DNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFN-------ATVVG-LNPWVEYEFR 674
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+AGN +G GEPS PS T + P AP+ I GGGG +L I+WE +P E QN +
Sbjct: 675 VVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGGGSRSELIITWESIPEELQNGEDF 734
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + R T + E + + + R + + +E+KV N G GP S
Sbjct: 735 GYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIPLSPFEIKVGVYNKEGEGPLSTAS 793
Query: 481 TIW 483
I+
Sbjct: 794 IIY 796
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 185/500 (37%), Gaps = 50/500 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P T SW R E L + + + ++D L I Y D +Y
Sbjct: 425 GDIVIECKPNAFPRATISWKRGIESLR------QSKRVFLLEDGSLKI-YNVTRSDAGLY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ ++ L ++ + P + GE ++ + C P FV
Sbjct: 478 TCIATNQFGVAKNTGSL-IIKERTVITVPPSTMDVTVGE--SIVLPCQVSRDPSVDVVFV 534
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G++I FE G+L+I + + SG Y CT + G +IV
Sbjct: 535 WSFNGDVIDFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + K + L R + + + I +G ++ + P I
Sbjct: 595 RGPPGPPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI 652
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T EYE V +++G + TK++V P + GG
Sbjct: 653 -LNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGG 711
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG Y ++ R ++TW E V E R+ R
Sbjct: 712 G----SRSELIITWESIPEELQNGEDF-GYIVMLRPVGSTTW--TKERVPSVESSRFIYR 764
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E ++P S +E KV N+ G G S+ S Y+ D+P AP +
Sbjct: 765 NEN-----IIPLSPFEIKVGVYNKEGEGPLSTASIIYSG-EDEPQLAPRGTSVQSFSASE 818
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW + + + Y++ + + E ++ GN I I T Y
Sbjct: 819 MEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITGLKANTVYF 876
Query: 463 VKVQAINDVGPGPESEVVTI 482
V+A N G GP S V +
Sbjct: 877 ASVRAYNTAGTGPSSPPVNV 896
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 107/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W NG ++ Y + L I ++D
Sbjct: 42 SKSEIILNCAANGYPLPHYRWKHNGADID-----FSMSYHYRLDGGSLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
YQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 TYQCLATNSLGTILSQKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPIPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPIPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + +L C A + D Y W NG R+ N+D I I+ G L
Sbjct: 322 QKIQDTYLSIYDSLFWECKASGKP--DPWYTWLKNGERL-NLD------ERIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGIYQCAAEN 390
>gi|281343741|gb|EFB19325.1| hypothetical protein PANDA_017735 [Ailuropoda melanoleuca]
Length = 1037
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 245/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 359 NLFWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 410
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+PKP WKK
Sbjct: 411 CIAENKHGLVYSSAELKVVASAPDFSKTPMKKLIQVQVGSMVSLDCKPRASPKPLCSWKK 470
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R ++G L I+ V++ D G Y+C A N G RL+V P+
Sbjct: 471 GDVIVQENERISFLKDGGLKIANVTKADVGTYTCIAENQFGKANGTTRLVVTE-PTRITL 529
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 530 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALTDFKKDGSHFEKVGGSSSGDLM- 588
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 589 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGID 648
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 649 NHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 703
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 704 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 763
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 764 AFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYEVKVGVYNNKGEGPFSPVTTVFS 822
Query: 484 --HDPLVIISYVCQGDL 498
+P + S V L
Sbjct: 823 AEEEPTIAPSQVSANSL 839
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P+ W++ + S + NG L I ++D+G Y C
Sbjct: 264 AAKGATVKLECFALGNPVPQINWRRSDGLPFSNKIKLRKFNGVLEIPDFQQEDTGSYECI 323
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++GRL P ++ QL + IA NL C A + +Y W NG
Sbjct: 324 AENSRGRNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLFWECRASGKP--KPSYRWLKNG 380
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ L E I I+ G L I+N + D+G ++C+ ++ G + S + V+ P
Sbjct: 381 ---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAP 433
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 116/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +N L + RY + L + +NP R D Y
Sbjct: 71 ITLNCEARGNPSPHYRWQLNGSDIN-----LSMEYRYKLNGGNLVV--INPNRNWDTGSY 123
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 124 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 181
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+++ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 182 WIFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTVTNAKVLGSPTPLVL 241
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R +
Sbjct: 242 RSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVPQI------NWRRSDGLPFS 295
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
N+++ N G+LEI + D G YEC+ +++ G+
Sbjct: 296 NKIKLRKFN---GVLEIPDFQQEDTGSYECIAENSRGR 330
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 181/498 (36%), Gaps = 63/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + ++ E++ F++D L I + + D Y C A+N
Sbjct: 456 CKPRASPKPLCSWKKGDVIVQ------ENERISFLKDGGLKIANVT-KADVGTYTCIAEN 508
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGN 128
Q + +L V+T P + GE +V + C + P F W +G
Sbjct: 509 QFGKANGTTRL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGA 565
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 566 LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGP 625
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L + + + +G + P + IDG
Sbjct: 626 PENVKVDEITDTTAQLSWKEGIDNHSPVISYSVQARTPFSVGWQTATTV--PEV-IDGKT 682
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
T EYE V + +G K+ T+ V P + GG
Sbjct: 683 HTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----S 738
Query: 292 KTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
++ I W + NG + ++ + TNW + V + RY R E+
Sbjct: 739 RSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES 792
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+VP+S YE KV N G G P SP + ++P APS++ ++ +
Sbjct: 793 -----IVPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEV 846
Query: 406 SWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYE 462
SW +P + N + Y++ +W N E S +K GN A +R + S YYT
Sbjct: 847 SWNTIPWKLSNGHLLGYEVRYW--NNGEEESSSKVKVGGNETSARLRGLKSNLAYYT--- 901
Query: 463 VKVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 902 -AVRAYNSAGAGPFSTTV 918
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 71 QLKTRYSSAQLRVLTL-----------KPSFKKRPLESETYAG-EGGNVTIFCNPEAAPK 118
QLK S QL +L+ P F + P S G E +T+ C P
Sbjct: 23 QLKMMLSWKQLILLSFIGCLGGELLLQGPVFIREPSNSIFPVGSEDKKITLNCEARGNPS 82
Query: 119 PKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLI 175
P + W+ +G+ I S R GNL++ +R+ D+G Y C ATN G S+ +L
Sbjct: 83 PHYRWQLNGSDINLSMEYRYKLNGGNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQ 142
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ ++ ++ +++ + + L C H+ EL +Y W N + E
Sbjct: 143 FAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSR 196
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTV 264
++ + G L I +D G Y CVV STV
Sbjct: 197 RFVSQETGHLYIAKVESSDVGNYTCVVTSTV 227
>gi|348575281|ref|XP_003473418.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Cavia porcellus]
Length = 1019
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 249/502 (49%), Gaps = 20/502 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
M + L W C A G P +Y W +NGE L E +R I++ LTI LN D
Sbjct: 320 MAVEDSLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTD 371
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
M+QC A+N+ YSSA+L+V+ P F K P+ + G V + C P A+P+
Sbjct: 372 SGMFQCIAENKHGLIYSSAELKVVASAPDFSKNPMRNLIRVQVGSLVNLDCKPRASPRAL 431
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK ++ R ++G L I+ V++ DSG Y+CTA N G + L+V+ P
Sbjct: 432 CSWKKGDAVVQEHERVSFLKDGGLKIANVTKADSGTYTCTAENQFG-KANGTTLLVVTEP 490
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ P + ++ ++ L C + LLD+ + W NG D + E +
Sbjct: 491 TRITLAPSNMDVSVGESIILPCQVKHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGGSSS 550
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L+ I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W
Sbjct: 551 GDLM-IRNIQLRHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPKNVKVDEITDTTAQLSW 609
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+G N P+T Y I ART ++ W V+ + + +D G+ + L PW YEF
Sbjct: 610 REGIDNHSPVTSYAIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEF 664
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN
Sbjct: 665 RVVASNKIGGGEPSFPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEG 724
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R T + +T+ + V R S ++ YEVKV N+ G GP S V
Sbjct: 725 FGYVVAFRPLGITTW-IQTVVTSPDTPRYVFRNESIVPFSPYEVKVGVYNNKGEGPFSPV 783
Query: 480 VTIW---HDPLVIISYVCQGDL 498
T++ +P V S V L
Sbjct: 784 TTVFSAEEEPTVAPSQVSAHSL 805
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T +CEA G P Y W LN + + + RY + L + NP R D Y
Sbjct: 37 ITLSCEAKGNPSPHYRW-----QLNGSNIDMSMEHRYKLNGGNLVV--FNPNRSWDTGSY 89
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 90 QCFATNSLGTVVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 147
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHG-----------MD 168
+++ + + + RR + E G+L I+ V D G Y+C T++ M
Sbjct: 148 WIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMVTNARVLGSPTPLML 207
Query: 169 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
S G ++ + P Q P + A ++L C A + + + + + L
Sbjct: 208 RSDG-VMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVPQINWRRSDGMPFPSKIKL 266
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI DAG YEC+ +++ GK
Sbjct: 267 RKF--------NGVLEIPAFQQEDAGSYECIAENSRGK 296
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 230 AAKGATVKLECFALGNPVPQINWRRSDGMPFPSKIKLRKF-NGVLEIPAFQQEDAGSYEC 288
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ Q + +A +L C A + +Y W N
Sbjct: 289 IAENSRGKNVARGRLTYYAKP-HWVQFIKDMEMAVEDSLYWECRASGKP--KPSYRWLKN 345
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G I S + V+
Sbjct: 346 GEA---LVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 398
Query: 278 P 278
P
Sbjct: 399 P 399
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 178/494 (36%), Gaps = 54/494 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + ++ E + F++D L I + + D Y C A+N
Sbjct: 422 CKPRASPRALCSWKKGDAVVQ------EHERVSFLKDGGLKIANVT-KADSGTYTCTAEN 474
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q + + L V+T P + GE ++ + C + P F W +G
Sbjct: 475 QFG-KANGTTLLVVTEPTRITLAPSNMDVSVGE--SIILPCQVKHDPLLDIMFTWYFNGA 531
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 532 LTDFKKDGSHFEKVGGSSSGDLMIRNIQLRHSGKYVCMVQTGVDSVSSAAELIVRGSPGP 591
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ + L R + I +G + + P + IDG
Sbjct: 592 PKNVKVDEITDTTAQLSWREGIDNHSPVTSYAIQARTPFSVGWQTVTTV--PEV-IDGKT 648
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
T EYE V + +G K+ T+ V P + GG
Sbjct: 649 HTATVVELNPWVEYEFRVVASNKIGGGEPSFPSEKVRTEEAVPEVPPSEVNGGGG----S 704
Query: 292 KTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 705 RSELVITWDPVPEELQNGEGF-GYVVAFRPLGITTW--IQTVVTSPDTPRYVFRNES--- 758
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+VP+S YE KV N G G P SP + ++P APS++ ++ ++W
Sbjct: 759 --IVPFSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSAHSLSSSEIEVAWN 815
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQ 466
+P + N + Y++ + E S +K GN A +R + S YYT V+
Sbjct: 816 TIPWKLSNGHLLGYEVRYWNNGGEEESSSKVKVAGNETSARLRGLKSNLAYYT----AVR 871
Query: 467 AINDVGPGPESEVV 480
A N G GP S V
Sbjct: 872 AYNSAGAGPFSATV 885
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE 140
+L P F K P S E +T+ C + P P + W+ +G NI S R
Sbjct: 12 LLLQGPVFLKEPSNSIFPVDSEDKKITLSCEAKGNPSPHYRWQLNGSNIDMSMEHRYKLN 71
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 72 GGNLVVFNPNRSWDTGSYQCFATNSLGTVVSREAKLQFAYLENFKTKMRSTVSVREGQGV 131
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 132 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 185
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 186 TCVVTSMV 193
>gi|296225710|ref|XP_002758613.1| PREDICTED: contactin-6 [Callithrix jacchus]
Length = 1029
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 235/481 (48%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 SLLWECKANGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ ++ GG++ I C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R +G Y+C ATN G ++ G LIV +
Sbjct: 446 GTETLRQSKRIFLLEDGSLKIYNVTRSHAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFMWFFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C VK+T+ +S +IV GPPG P V+V ++ T++ + W G
Sbjct: 562 LMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVKVEDISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSKPSALLRTKASVPVVAPVNINGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + V R S + +EVKV ND G G S V +
Sbjct: 737 IVMFRPVGLTAWTKEKVASVESSRF-VYRNESIIPLSPFEVKVGVYNDEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y ++ L I + ++D
Sbjct: 42 SKSEIILNCAANGHPSPHYRWKQNGTDID-----FTMSYHYRLEGGSLAISSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG-- 172
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 173 --------RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
I+ + + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGKIMSYXXKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 ---------YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
++++ + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGKIMSYXXKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + +L C A+ + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTYLSIYDSLLWECKANGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 185/508 (36%), Gaps = 66/508 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y Y
Sbjct: 425 GDIVIECKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNVTRSHAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ F+W +G++I FE G+L+I + + SG Y CT +
Sbjct: 530 EVVFMWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVKVEDISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSALLRTKASVPVVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGK 334
+ GG ++ I W + NG I ++ + T W E V
Sbjct: 707 INGGGG----SRSELVITWESIPEELQNGEGFGYIVMFRPVGLTAWTK------EKVASV 756
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
E R+ R E+ ++P S +E KV N+ G G S+ + Y+ D+P AP
Sbjct: 757 ESSRFVYRNES-----IIPLSPFEVKVGVYNDEGEGSLSTVTIVYSG-EDEPQLAPRGTS 810
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
++ +SW + + + Y++ + + E ++ GN I I
Sbjct: 811 VQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITG 868
Query: 455 EFYYTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 869 LKANTIYFASVRAYNTAGTGPSSPPVNV 896
>gi|326928154|ref|XP_003210246.1| PREDICTED: contactin-3-like [Meleagris gallopavo]
Length = 941
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 236/478 (49%), Gaps = 17/478 (3%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L+ E R +++ LTI LN D YQC
Sbjct: 248 LYWDCRASGKPKPSYRWLKNGDQLSVE-------GRIQVENGALTISNLN-LTDSGRYQC 299
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+LRV+ P F K P++ G V C P+A+PK + WKK
Sbjct: 300 VAENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKG 359
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + R + ++G L I+ V++ D+G Y+C ATN G L+V P+
Sbjct: 360 GEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATNQFGTASGTTNLVVTE-PTRITLA 418
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + + ++ L C + +LD+++ W NG D + E + G L+ I
Sbjct: 419 PSNMDVTVGESVILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLM-I 477
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+VK+ V +++ +IV G PG P V+V E+ T+A I W +G N
Sbjct: 478 RNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEITDTTAQISWQEGTDN 537
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+T Y + ART ++ W V+ D G + L PW YEF+V+A N
Sbjct: 538 HSPVTAYTVQARTPFSVGWQRVT-----TVPDVIDGNTFTTTVVDLNPWVEYEFRVVASN 592
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P P+ + GGGG +L I+W+P+P E QN Y +
Sbjct: 593 KIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVA 652
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 653 FRPFGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSSVTTVF 709
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P+ W++ + + NG + I ++D+G+Y C
Sbjct: 152 AAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRKSNGMIEIPNFQQEDAGLYECI 211
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
N G + ++GRL P ++ Q+ IA L C A + +Y W NG
Sbjct: 212 TENSRGKNIARGRLTYYAKP-HWIQMIKDTEIAVEDTLYWDCRASGKP--KPSYRWLKNG 268
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
D +E I ++ G L I+N + D+G Y+CV ++ G I S + V+ P
Sbjct: 269 ------DQLSVEG-RIQVENGALTISNLNLTDSGRYQCVAENKHGVIYSSAELRVVASAP 321
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 185/496 (37%), Gaps = 58/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + GE L+ E++ ++D L I + + D Y C A N
Sbjct: 344 CKPKASPKARCSWKKGGEQLH------ENERITLLKDGGLRITNVT-KVDAGSYTCVATN 396
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q T + L V+T P + GE +V + C + P F W +G
Sbjct: 397 QFGTASGTTNL-VVTEPTRITLAPSNMDVTVGE--SVILPCQVQHDPILDISFTWYFNGT 453
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 454 LTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGP 513
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETPNINIDG 240
E + ++ Q+ T+ V AY + +G + + P++ IDG
Sbjct: 514 PEHV--RVDEITDTTAQISWQEGTDNHSPVTAYTVQARTPFSVGWQRVTTV--PDV-IDG 568
Query: 241 GLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVE 289
T EYE V + +G K+ T+ V P + GG
Sbjct: 569 NTFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGG--- 625
Query: 290 VHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 626 -SRSELVITWDPIPEELQNGEGF-GYVVAFRPFGTTTW--IQTVVTSPDTPRYVFRNES- 680
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
++P+S YE KV N G G SS + ++ ++P APS + + +S
Sbjct: 681 ----ILPFSPYEVKVGVYNNKGEGPFSSVTTVFSA-EEEPTVAPSGVSVTSLSSSVIEVS 735
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEF-YYTEYEVK 464
W+ +P + + + Y++ + E S +K GN I + + S YYT
Sbjct: 736 WKAIPWKMSSGRLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYT----A 791
Query: 465 VQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 792 VRAYNSAGAGPFSATV 807
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 91/240 (37%), Gaps = 24/240 (10%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIF-ENGN 143
P + + S EG V + C P A + F W + + + RR + E G+
Sbjct: 34 PEGSRMKMRSTVSVREGQGVVLLCGTPPRAGELSFAWIFNEYPSFVQEDSRRFVSQETGH 93
Query: 144 LLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIA 193
L I+ V D G Y+C T TN + ++ G P Q P + A
Sbjct: 94 LYIAKVEPSDVGNYTCVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAA 153
Query: 194 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 253
++L C A + + + T + L + G++EI N DA
Sbjct: 154 KGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRK--------SNGMIEIPNFQQEDA 205
Query: 254 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 313
G YEC+ +++ GK + + P ++ E+ T+ W D +G+P Y+
Sbjct: 206 GLYECITENSRGKNIARGRLTYYAKPHWIQMIKDTEI-AVEDTLYW-DCRASGKPKPSYR 263
>gi|301784957|ref|XP_002927893.1| PREDICTED: contactin-3-like [Ailuropoda melanoleuca]
Length = 1027
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 245/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 334 NLFWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+PKP WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKTPMKKLIQVQVGSMVSLDCKPRASPKPLCSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R ++G L I+ V++ D G Y+C A N G RL+V P+
Sbjct: 446 GDVIVQENERISFLKDGGLKIANVTKADVGTYTCIAENQFGKANGTTRLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALTDFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGID 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P + S V L
Sbjct: 798 AEEEPTIAPSQVSANSL 814
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P+ W++ + S + NG L I ++D+G Y C
Sbjct: 239 AAKGATVKLECFALGNPVPQINWRRSDGLPFSNKIKLRKFNGVLEIPDFQQEDTGSYECI 298
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++GRL P ++ QL + IA NL C A + +Y W NG
Sbjct: 299 AENSRGRNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLFWECRASGKP--KPSYRWLKNG 355
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ + I I+ G L I+N + D+G ++C+ ++ G + S + V+ P
Sbjct: 356 EAL-------VLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAP 408
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 116/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +N L + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIN-----LSMEYRYKLNGGNLVV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+++ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTVTNAKVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R +
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGATVKLECFALGNPVPQI------NWRRSDGLPFS 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
N+++ N G+LEI + D G YEC+ +++ G+
Sbjct: 271 NKIKLRKFN---GVLEIPDFQQEDTGSYECIAENSRGR 305
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 181/498 (36%), Gaps = 63/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + ++ E++ F++D L I + + D Y C A+N
Sbjct: 431 CKPRASPKPLCSWKKGDVIVQ------ENERISFLKDGGLKIANVT-KADVGTYTCIAEN 483
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGN 128
Q + +L V+T P + GE +V + C + P F W +G
Sbjct: 484 QFGKANGTTRL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNGA 540
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 541 LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGP 600
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L + + + +G + P + IDG
Sbjct: 601 PENVKVDEITDTTAQLSWKEGIDNHSPVISYSVQARTPFSVGWQTATTV--PEV-IDGKT 657
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
T EYE V + +G K+ T+ V P + GG
Sbjct: 658 HTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----S 713
Query: 292 KTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
++ I W + NG + ++ + TNW + V + RY R E+
Sbjct: 714 RSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES 767
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+VP+S YE KV N G G P SP + ++P APS++ ++ +
Sbjct: 768 -----IVPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEV 821
Query: 406 SWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYE 462
SW +P + N + Y++ +W N E S +K GN A +R + S YYT
Sbjct: 822 SWNTIPWKLSNGHLLGYEVRYW--NNGEEESSSKVKVGGNETSARLRGLKSNLAYYT--- 876
Query: 463 VKVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 877 -AVRAYNSAGAGPFSTTV 893
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 12/192 (6%)
Query: 79 AQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRR 136
A+ +L P F + P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 17 AESELLLQGPVFIREPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYR 76
Query: 137 KIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAA 194
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++
Sbjct: 77 YKLNGGNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVRE 136
Query: 195 HRNLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 252
+ + L C H+ EL +Y W N + E ++ + G L I +D
Sbjct: 137 GQGVVLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVESSD 190
Query: 253 AGEYECVVKSTV 264
G Y CVV STV
Sbjct: 191 VGNYTCVVTSTV 202
>gi|296475001|tpg|DAA17116.1| TPA: contactin 6 [Bos taurus]
Length = 1018
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 241/483 (49%), Gaps = 27/483 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G PD Y+W +NGE LN + +R I++ L I LN D +YQC
Sbjct: 325 LFWECKASGKPDPWYTWLKNGERLNLD-------ERIQIENGTLIITMLNVS-DSGIYQC 376
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + Y++A+LRVL P F K PL+ + GG++ I C P A P+ WK+
Sbjct: 377 AAENKYQIIYANAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISWKRG 436
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + E+G+L I V+R D+G+Y+C ATN G+ ++ G LI+ +
Sbjct: 437 IESLRQSKRVFLLEDGSLKIYNVTRSDAGLYTCIATNQFGVAKNTGSLIIKER-TVITVP 495
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 243
P + + ++ L C + +DV ++W+ NG I D + I G G L
Sbjct: 496 PSTMDVTVGESIVLPCQVSRDPSVDVVFVWSFNGDVI---DFKKGMAHFERIGGESVGDL 552
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C VK+T+ +S +IV GPPG P V+V + T+ + W G+
Sbjct: 553 MIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPGPPEDVRVKHISSTTCQLSWRPGS 612
Query: 304 TNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
N PI + I ART ++ W VS E + GK + A++ L PW YEF+
Sbjct: 613 DNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFN-------ATVVG-LNPWVEYEFR 664
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+AGN +G GEPS PS T + P AP+ I GGGG +L I+WE +P E QN +
Sbjct: 665 VVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGGGSRSELIITWESIPEELQNGEDF 724
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + R T + E + + + R + + +E+KV N G GP S
Sbjct: 725 GYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIPLSPFEIKVGVYNKEGEGPLSTAS 783
Query: 481 TIW 483
I+
Sbjct: 784 IIY 786
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 185/500 (37%), Gaps = 50/500 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P T SW R E L + + + ++D L I Y D +Y
Sbjct: 415 GDIVIECKPNAFPRATISWKRGIESLR------QSKRVFLLEDGSLKI-YNVTRSDAGLY 467
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ ++ L ++ + P + GE ++ + C P FV
Sbjct: 468 TCIATNQFGVAKNTGSL-IIKERTVITVPPSTMDVTVGE--SIVLPCQVSRDPSVDVVFV 524
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G++I FE G+L+I + + SG Y CT + G +IV
Sbjct: 525 WSFNGDVIDFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIV 584
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + K + L R + + + I +G ++ + P I
Sbjct: 585 RGPPGPPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI 642
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T EYE V +++G + TK++V P + GG
Sbjct: 643 -LNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGG 701
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG Y ++ R ++TW E V E R+ R
Sbjct: 702 G----SRSELIITWESIPEELQNGEDF-GYIVMLRPVGSTTW--TKERVPSVESSRFIYR 754
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E ++P S +E KV N+ G G S+ S Y+ D+P AP +
Sbjct: 755 NEN-----IIPLSPFEIKVGVYNKEGEGPLSTASIIYSG-EDEPQLAPRGTSVQSFSASE 808
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW + + + Y++ + + E ++ GN I I T Y
Sbjct: 809 MEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGN--ITTKNITGLKANTVYF 866
Query: 463 VKVQAINDVGPGPESEVVTI 482
V+A N G GP S V +
Sbjct: 867 ASVRAYNTAGTGPSSPPVNV 886
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 107/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W NG ++ Y + L I ++D
Sbjct: 32 SKSEIILNCAANGYPLPHYRWKHNGADID-----FSMSYHYRLDGGSLAISSPRTDQDIG 86
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
YQC A N L T S F+ + S EG V + C P P F
Sbjct: 87 TYQCLATNSLGTILSQKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 141
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 142 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 201
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 202 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPIPDISWRRLDGSPLPG 261
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 262 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 308
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 142 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 195
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 196 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPIPDISWRRL 254
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 255 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 311
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + +L C A + D Y W NG R+ N+D I I+ G L
Sbjct: 312 QKIQDTYLSIYDSLFWECKASGKP--DPWYTWLKNGERL-NLD------ERIQIENGTLI 362
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 363 ITMLNVSDSGIYQCAAEN 380
>gi|402885644|ref|XP_003906259.1| PREDICTED: contactin-1 isoform 2 [Papio anubis]
Length = 1007
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 247/483 (51%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 331 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 375
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 376 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 434
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 435 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A ++ LD+ ++W+ NG I N N +D
Sbjct: 494 TRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 554 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 669 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 729 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 787
Query: 480 VTI 482
I
Sbjct: 788 AVI 790
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 30 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 89 INNPDKQKDAGIYYCLASNSYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 239
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 210
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 211 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 270
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 271 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 322
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 323 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 364
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 365 LRLYDVTFENAGMYQCIAENTYGAI 389
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 189/499 (37%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 425 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 477 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYV 535
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 596 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 652
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 653 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 700
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 701 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 758
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 759 KDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 812
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 813 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 866
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+ +
Sbjct: 867 FIEVGACNSAGCGPPSDTI 885
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 47 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 98
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 99 GIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 155
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 156 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 215
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 216 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 266
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 267 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 326
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 327 NDTEV-DIGSDLYWPCVAT-GKPI 348
>gi|355786012|gb|EHH66195.1| Neural cell surface protein F3 [Macaca fascicularis]
Length = 1018
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 247/483 (51%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A ++ LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 680 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNSYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 189/499 (37%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 711
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 712 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 769
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 KDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 823
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 824 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 877
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+ +
Sbjct: 878 FIEVGACNSAGCGPPSDTI 896
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|344235922|gb|EGV92025.1| Contactin-4 [Cricetulus griseus]
Length = 822
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 228/459 (49%), Gaps = 16/459 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 207 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 258
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 259 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVIIECKPKASPRPVYTWRKGRE 318
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +IV P+ P
Sbjct: 319 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTKVMVPPS 377
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + W+ NG I + D + E G L I N
Sbjct: 378 SMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 437
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K++ +IV GPPG P V + E+ T+A + W G N
Sbjct: 438 IQLKHAGKYVCMVQTSVDKLTAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 497
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W VS + + VD G+ + L PW YEF+ +A N +
Sbjct: 498 PITMYVIQARTPFSVGWQAVS--TVPELVD---GKTFTATVVGLNPWVEYEFRTVAANVI 552
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 553 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 612
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
+ L + V R S ++ +EVKV+
Sbjct: 613 PHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVK 650
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR +G L I ++D+G Y C
Sbjct: 109 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SDGILEIPNFQQEDAGSYEC 167
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+LI P++ +++ I +A ++ C A+ Y W N
Sbjct: 168 VAENSRGKNIAKGQLIFYAQPNWVQKI-NDIHVAMEESVFWECKANGRP--KPTYRWLKN 224
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 225 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 277
Query: 278 P 278
P
Sbjct: 278 P 278
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 140 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 191
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 47 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 106
Query: 192 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 107 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR-------HKSDGILEIPNF 157
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
DAG YECV +++ GK K +I P + + V ++ W + NGRP
Sbjct: 158 QQEDAGSYECVAENSRGKNIAKGQLIFYAQPNWVQKINDIHV-AMEESVFW-ECKANGRP 215
Query: 309 ITHYK 313
Y+
Sbjct: 216 KPTYR 220
>gi|387762905|ref|NP_001248680.1| contactin 1 precursor [Macaca mulatta]
gi|402885642|ref|XP_003906258.1| PREDICTED: contactin-1 isoform 1 [Papio anubis]
gi|355564139|gb|EHH20639.1| Neural cell surface protein F3 [Macaca mulatta]
gi|380787725|gb|AFE65738.1| contactin-1 isoform 1 precursor [Macaca mulatta]
Length = 1018
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 247/483 (51%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A ++ LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 680 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNSYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 189/499 (37%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 711
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 712 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 769
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 KDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 823
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 824 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 877
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+ +
Sbjct: 878 FIEVGACNSAGCGPPSDTI 896
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|291384023|ref|XP_002708477.1| PREDICTED: contactin 5 [Oryctolagus cuniculus]
Length = 1108
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P T+ W +NG PL Q R + + VL I +N + D
Sbjct: 410 LDSGSPLRWECKATGKPRPTFRWLKNGA-------PLLPQSRVEMVNGVLMIHSVN-QSD 461
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ +G V I C P+ +PKP
Sbjct: 462 AGMYQCLAENKYGAIYASAELKILASAPTFAPNQLKKTIIVTKGREVEIECKPQGSPKPA 521
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +GNL I S+ D G Y C N+ G E + V P
Sbjct: 522 ISWKKGDKAVRENKRIAILPDGNLRILNASKSDEGKYVCRGENIFGSAEIVASVSVKE-P 580
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P +I + ++ L C A + LDV + WT G I + E+
Sbjct: 581 TRIELTPKRIELTVGESIVLNCKAIHDASLDVNFFWTLKGQPIEFEKEGGHFESIRAQAS 640
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 641 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 700
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N P+T Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 701 SPAADNHSPVTSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVEYEF 755
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 756 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 815
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 816 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 874
Query: 480 VTI 482
V I
Sbjct: 875 VVI 877
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE+ G P +Y W RNG ++ LE RY + + I + +D
Sbjct: 123 SDEKKVALNCESRGNPVPSYRWLRNGTEID-----LESDYRYSLIEGTFIISNPSEAKDA 177
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N + S + +F R S EG V + C+P +P+
Sbjct: 178 GHYQCLATNTFGSILSREAILQFAYLGNFSGR-TRSAVSVREGQGVVLLCSPPPHSPEII 236
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 237 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQASDVGSYICLVKNTVTNARVLSPPTPL 296
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 297 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSR 355
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC ++ GK S +
Sbjct: 356 LRKSQ--------AVLEIPNVQLDDAGIYECRAENARGKNSFR 390
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 106/280 (37%), Gaps = 25/280 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 233 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQASDVGSYICLVKNTVTNAR 288
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 289 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 348
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 349 YIPSKSRLRK-SQAVLEIPNVQLDDAGIYECRAENARGKNSFRGQLQVYTYPHWVEKL-N 406
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + + W NG + L + + G+L I +
Sbjct: 407 DTQLDSGSPLRWECKATGKP--RPTFRWLKNGAPL-------LPQSRVEMVNGVLMIHSV 457
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGPPGLPGGVQ 286
+ +DAG Y+C+ ++ G I S + ++ P P ++
Sbjct: 458 NQSDAGMYQCLAENKYGAIYASAELKILASAPTFAPNQLK 497
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 955 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVRSLA 1010
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ T Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1011 NESEVLGYKVFYRQEGHTNSQVIETQKPQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1062
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1063 GTNSSQIRV 1071
>gi|348510467|ref|XP_003442767.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
Length = 1029
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 229/478 (47%), Gaps = 14/478 (2%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P +Y W +NGE L S ++R + VL+I L D MYQ
Sbjct: 337 SLAWECKATGKPKPSYRWMKNGENLES------TEERIQVASGVLSISRLT-LTDTGMYQ 389
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ YS+A+LRV+ + P F L S+T GG+ + C P+ +P W+K
Sbjct: 390 CVAGNKHGEVYSNAELRVIAVAPDFSHNQLRSQTLVKVGGDALVECKPKMSPWGVISWRK 449
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R I +NG+L I V++ D+G+Y+C A N G+ S G +IV P+
Sbjct: 450 GSEPLQETDRISILDNGSLRIWNVTKSDAGLYTCVARNQFGVASSTGSIIVKE-PTVITT 508
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
L + + ++ L C + L++ + W N I G + I
Sbjct: 509 LASTLDVTVGESVVLPCQVSHDPSLELKFTWFFNEQLIHFGSHGGFFEKVGGHSAGDIMI 568
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N AG+Y C V++ V IS ++V GPPG P +QV + T+A++ W G N
Sbjct: 569 RNVQLRHAGKYTCAVQTKVDSISVAVDLVVRGPPGPPTSIQVEGITDTTASLSWRPGPDN 628
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
PIT Y I ART ++ W V+ EV R T I+ L PW YEF+V+A N
Sbjct: 629 HSPITAYTIQARTPFSLGWQAVTTV---PEVVRGTRLTATVID--LSPWVEYEFRVLASN 683
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
+G GEPS PS Q T P P+ + GGGG +L I+WEP+P E QN P Y +
Sbjct: 684 SIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSELVITWEPVPEELQNGPGFGYVVA 743
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + + V + S ++ ++VKV N++G GP V TI+
Sbjct: 744 FRPHGATGWMQAAVPS-AEASRYVFKNESIQPFSPFQVKVGVYNNLGEGPFGPVTTIY 800
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 128/327 (39%), Gaps = 30/327 (9%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
++ ++ ++CEA G P Y W NG +N +T Y + L I +LN ++D
Sbjct: 43 VEKNREVVFSCEAKGSPPPMYRWRLNGTEINPKT-----GSHYSLSGGNLRISHLNKDQD 97
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP- 119
YQC A N T S +FK + S EG V + C P
Sbjct: 98 AGTYQCLASNSFGTIVSREASLTFAYLENFKTQ-RRSSVSVREGQGVVLLCGPPPHSGDL 156
Query: 120 --KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RL 174
+++ + + RR I E GNL I+ V D G Y+C TN +G
Sbjct: 157 VFSWIFNEYPTFVKQDTRRFISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTP 216
Query: 175 IVLHG--------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+VL P Q P + +A ++L C A +++ N +
Sbjct: 217 LVLRSDGVMGEYEPKIEVQFPELVHVAKGSTVKLECFALGNPAPSISWRRVDNVPFPRKV 276
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D+ + G+LEI DAG YECV +++ G + K + PP L Q
Sbjct: 277 DMRKAS--------GVLEIPYFQQEDAGTYECVAENSRGMNTVKGKLSFYAPPHLIETPQ 328
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYK 313
V+ ++ W AT G+P Y+
Sbjct: 329 DVQ-KLIDDSLAWECKAT-GKPKPSYR 353
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 183/496 (36%), Gaps = 54/496 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P SW + E PL++ DR I DN ++R N + D +Y C A+
Sbjct: 435 CKPKMSPWGVISWRKGSE-------PLQETDRISILDNG-SLRIWNVTKSDAGLYTCVAR 486
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-----GGNVTIFCNPEAAP--KPKFV 122
NQ S+ + V K P T A G +V + C P + KF
Sbjct: 487 NQFGVASSTGSIIV--------KEPTVITTLASTLDVTVGESVVLPCQVSHDPSLELKFT 538
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W + +I G FE G+++I V +G Y+C L+V
Sbjct: 539 WFFNEQLIHFGSHGGFFEKVGGHSAGDIMIRNVQLRHAGKYTCAVQTKVDSISVAVDLVV 598
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P + + +L R + I +G + + P +
Sbjct: 599 RGPPGPPTSIQVEGITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTV--PEV 656
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVE 289
+ G L T + EYE + +++G K S + P P V
Sbjct: 657 -VRGTRLTATVIDLSPWVEYEFRVLASNSIGTGEPSKPSKQARTKGTSPKVTPANVSGGG 715
Query: 290 VHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ I W + NG P Y + R + + W + V E RY + E+
Sbjct: 716 GSRSELVITWEPVPEELQNG-PGFGYVVAFRPHGATGWMQAA--VPSAEASRYVFKNES- 771
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ P+S ++ KV N LG G P P + ++P +AP+R+ ++ +S
Sbjct: 772 ----IQPFSPFQVKVGVYNNLGEG-PFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVS 826
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
W+ LP + Y++ + +++ E + + GN ++R T Y V V+
Sbjct: 827 WKALPWNANKKRVLGYELRYWSRSEREDTASVQRTVGNQTSTIIR--GVKGSTAYYVSVR 884
Query: 467 AINDVGPGPESEVVTI 482
A N G GP S V +
Sbjct: 885 AYNTAGTGPPSTTVNV 900
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 23/259 (8%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV-LTIRYLNPERDPAMYQCRAKNQL-KTR 75
D+ +SW N T +D R+ Q+ L I + P D Y C N + KTR
Sbjct: 155 DLVFSWIFN----EYPTFVKQDTRRFISQETGNLYIAKVEPS-DVGNYTCVVTNTVTKTR 209
Query: 76 Y----SSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LR + ++ + + +G V + C P P W++ N
Sbjct: 210 VQGPPTPLVLRSDGVMGEYEPKIEVQFPELVHVAKGSTVKLECFALGNPAPSISWRRVDN 269
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ +G L I ++D+G Y C A N GM+ KG+L + P + + P
Sbjct: 270 VPFPRKVDMRKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGKL-SFYAPPHLIETPQ 328
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ +L C A + +Y W NG N++ E I + G+L I+
Sbjct: 329 DVQKLIDDSLAWECKATGKP--KPSYRWMKNG---ENLESTE---ERIQVASGVLSISRL 380
Query: 249 SFADAGEYECVVKSTVGKI 267
+ D G Y+CV + G++
Sbjct: 381 TLTDTGMYQCVAGNKHGEV 399
>gi|410951589|ref|XP_003982477.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6-like [Felis catus]
Length = 1028
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ Y+W +NGE L E +R I++ L I LN D +YQ
Sbjct: 334 SLFWECKASGKPNPWYTWLKNGERLTPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K PL+ + GG++TI C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKNPLKKTSVVQVGGDITIECKPAAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+CTATN G+ ++ G L+V +
Sbjct: 446 GMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCTATNQFGIAKNTGSLVVKER-TVITI 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V +IW+ NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVIFIWSFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ N PI + + ART ++ W + + G+ + L PW YEF+V+
Sbjct: 622 SDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS S T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMLRPVGSTTWTKERVPSVESSRF-VYRNESITPLSPFEVKVGVYNNEGEGSLSTVSIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 111/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P +Y W +NG ++ Y + + L I ++D
Sbjct: 42 SKSEIILNCAATGYPSPSYRWKQNGTDID-----FTMSYHYRLDEGNLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNTLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFVTNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGNPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 318
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 112/505 (22%), Positives = 184/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+T C+ P SW R E L R F+ ++ Y D Y
Sbjct: 425 GDITIECKPAAFPRAAISWKRGME-------SLRQSKRVFLSEDGSLKIYNVTRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCTATNQFGIAKNTGSLVVKERTVITIPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ F+W +G++I FE G+L+I + + SG Y CT +
Sbjct: 530 EVIFIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + + + +G ++ +
Sbjct: 590 ADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 INGGGG----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTTW--TKERVPSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ + P S +E KV N G G S+ S Y+ D+P AP
Sbjct: 760 RFVYRNES-----ITPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQLAPRGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGAGPSSPPVNV 896
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 36/260 (13%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFVTNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DGN + G+ K ++ +L P ++D G Y C A N+ G + +KG+LI + P +E
Sbjct: 265 DGNPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP--NINIDGGL 242
Q ++ + +L C A + + Y W NG R+ TP I I+ G
Sbjct: 322 QKIQNTYLSIYDSLFWECKASGKP--NPWYTWLKNGERL---------TPEERIQIENGT 370
Query: 243 LEITNASFADAGEYECVVKS 262
L IT + +D+G Y+C ++
Sbjct: 371 LIITMLNVSDSGVYQCAAEN 390
>gi|355763246|gb|EHH62135.1| hypothetical protein EGM_20344, partial [Macaca fascicularis]
Length = 876
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 177 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSSQSRVEMVNGVLMIHNVN-QSD 228
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F LE + V I C P+ +PKP
Sbjct: 229 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLEKTIIVTKDQEVVIECKPQGSPKPT 288
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 289 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 347
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 348 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 404
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 405 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 464
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 465 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 519
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 520 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 579
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 580 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 638
Query: 477 SEVVTI 482
S++V I
Sbjct: 639 SQIVVI 644
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 106/271 (39%), Gaps = 25/271 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 1 EIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARV 56
Query: 78 SAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
+ LTL+ E + A +G V + C P P W K
Sbjct: 57 LSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNGY 116
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
I S R + + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 117 IPSKSRLRKSQ-AVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-ND 174
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
+ + L+ C A + Y W NGV + + E+ +N G+L I N +
Sbjct: 175 TQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSSQSRVEM----VN---GVLMIHNVN 225
Query: 250 FADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+DAG Y+C+ ++ G I S + ++ P
Sbjct: 226 QSDAGMYQCLAENKYGAIYASAELKILASAP 256
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 722 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 777
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 778 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGIYI---IEVRAYSEGGD 829
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 830 GTASSQIRV 838
>gi|114645304|ref|XP_001168046.1| PREDICTED: contactin-1 isoform 3 [Pan troglodytes]
Length = 1007
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 331 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 375
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 376 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 434
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 435 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 494 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 554 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 669 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 729 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 787
Query: 480 VTI 482
I
Sbjct: 788 AVI 790
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 30 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 89 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 239
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 210
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 211 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 270
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 271 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 322
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 323 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 364
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 365 LRLYDVTFENAGMYQCIAENTYGAI 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 190/499 (38%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 425 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 477 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 535
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 596 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 652
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 653 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 700
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 701 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 758
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 759 KDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGAKVLSSS 812
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 813 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 866
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+++
Sbjct: 867 FIEVGACNSAGCGPPSDMI 885
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 47 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 98
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 99 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 155
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 156 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 215
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 216 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 266
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 267 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 326
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 327 NDTEV-DIGSDLYWPCVAT-GKPI 348
>gi|28373119|ref|NP_778203.1| contactin-1 isoform 2 precursor [Homo sapiens]
gi|397510802|ref|XP_003825776.1| PREDICTED: contactin-1 isoform 2 [Pan paniscus]
gi|469045|gb|AAA67921.1| h-contactin 2 precursor [Homo sapiens]
gi|119578228|gb|EAW57824.1| contactin 1, isoform CRA_b [Homo sapiens]
Length = 1007
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 331 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 375
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 376 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 434
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 435 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 494 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 554 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 669 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 729 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 787
Query: 480 VTI 482
I
Sbjct: 788 AVI 790
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 30 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 89 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 239
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 210
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 211 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 270
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 271 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 322
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 323 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 364
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 365 LRLYDVTFENAGMYQCIAENTYGAI 389
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 190/499 (38%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 425 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 477 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 535
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 596 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 652
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 653 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 700
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 701 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 758
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 759 KDET-----MSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 812
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 813 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 866
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+++
Sbjct: 867 FIEVGACNSAGCGPPSDMI 885
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 47 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 98
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 99 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 155
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 156 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 215
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 216 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 266
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 267 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 326
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 327 NDTEV-DIGSDLYWPCVAT-GKPI 348
>gi|28373117|ref|NP_001834.2| contactin-1 isoform 1 precursor [Homo sapiens]
gi|397510800|ref|XP_003825775.1| PREDICTED: contactin-1 isoform 1 [Pan paniscus]
gi|2497301|sp|Q12860.1|CNTN1_HUMAN RecName: Full=Contactin-1; AltName: Full=Glycoprotein gp135;
AltName: Full=Neural cell surface protein F3; Flags:
Precursor
gi|469043|gb|AAA67920.1| h-contactin 1 precursor [Homo sapiens]
gi|119578226|gb|EAW57822.1| contactin 1, isoform CRA_a [Homo sapiens]
gi|119578227|gb|EAW57823.1| contactin 1, isoform CRA_a [Homo sapiens]
Length = 1018
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 680 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 190/499 (38%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 711
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 712 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 769
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 KDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 823
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 824 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 877
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+++
Sbjct: 878 FIEVGACNSAGCGPPSDMI 896
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|351705488|gb|EHB08407.1| Contactin-1 [Heterocephalus glaber]
Length = 1140
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 246/484 (50%), Gaps = 24/484 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 423 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 467
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 468 -GMYQCIAENTYGAIYANAELKILALAPTFELNPMKKKILAAKGGRVIIECKPKAAPKPK 526
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 527 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 585
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 586 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFTKENIHYQRNFMLDA 645
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 646 NGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 705
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 706 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 760
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 761 RVLATNTLGMGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 820
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S +
Sbjct: 821 FGYIVAFKPFDGDEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLI 879
Query: 480 VTIW 483
I+
Sbjct: 880 AVIY 883
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 104/271 (38%), Gaps = 43/271 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++T C A G P W + E P+ VL I + E D +Y+
Sbjct: 245 NVTLECFALGNPVPDIRWRKVLE-------PMPSTAEISTSGAVLKIFNIQLE-DEGLYE 296
Query: 66 CRAKNQLKTRYSSAQLRVL-TLKPSFKKRPLE-SETYAGEGGNVTIFCNPEAAPKPKFVW 123
C A+N A++ V T KP ++ + YA G NVT+ C P P W
Sbjct: 297 CEAENIRGKDKHQARIYVQGTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRW 356
Query: 124 KK-------DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+K I SG KIF + +D G+Y C A N+ G D+ + R+ V
Sbjct: 357 RKVLEPMPSTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDKHQARIYV 408
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P + E + + +L C A + + + W NG
Sbjct: 409 QAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK----------- 454
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKI 267
G L + + +F +AG Y+C+ ++T G I
Sbjct: 455 ----GELRLYDVTFENAGMYQCIAENTYGAI 481
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 116/314 (36%), Gaps = 49/314 (15%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 154 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 208
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 209 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 268
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D+ + R+ V
Sbjct: 269 MPSTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDKHQARIYVQGTTKP 320
Query: 183 YEQLPPKITIAAH-------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
Y P I + +N+ L C A + D+ R + T
Sbjct: 321 Y---PADIVVQFKDIYALMGQNVTLECFALGNPVPDI---------RWRKVLEPMPSTAE 368
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
I+ G +L+I N D G YEC ++ GK + + V+ P + EV +
Sbjct: 369 ISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEV-DIGS 427
Query: 296 TIQWTDGATNGRPI 309
+ W AT G+PI
Sbjct: 428 DLYWPCVAT-GKPI 440
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 28 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 86
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 87 INNPDKQKDAGIYYCLASNNYGMVRSTEATLNF---GYLDPFPPEERPEVRVKEGKGMVL 143
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 144 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 199
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 200 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 237
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 108/292 (36%), Gaps = 38/292 (13%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 45 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 96
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 97 GIYYCLASNNYGMVRSTEATLNFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 153
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 154 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 213
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 214 IPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 264
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ T I+ G +L+I N D G YEC ++ GK + + V+G
Sbjct: 265 VLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQG 316
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 186/497 (37%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 517 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 568
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A F+W +G +
Sbjct: 569 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 627
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 628 IDFTKENIHYQRNFMLDANGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGP 687
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 688 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 744
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V +T + G P +P ++ + + +D
Sbjct: 745 EAARAVDLIPWMEYEFRVLAT--------NTLGMGEPSIPS--NRIKTDGAAPNVAPSDV 794
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 795 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGDEWKKVT--VTNPDTGRYVHKD 852
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + D P +AP+ +G ++
Sbjct: 853 E-----TMSPSTAFQVKVKAFNNKGDG-PYSLIAVIYSAQDAPNEAPTDVGVKVLSSSEI 906
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ W+ + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 907 SVHWKHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 960
Query: 464 KVQAINDVGPGPESEVV 480
+V A N G GP SEV+
Sbjct: 961 EVGACNSAGCGPPSEVI 977
>gi|149716431|ref|XP_001499480.1| PREDICTED: contactin-5 isoform 3 [Equus caballus]
Length = 1026
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 327 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLLPQSRVEMVNGVLMIHNVN-QSD 378
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ +G VT+ C P+ +PKP
Sbjct: 379 AGMYQCLAENKYGAIYASAELKILASAPTFALNHLKKTIIVTKGQEVTMECKPQGSPKPT 438
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G L I S+ D G Y C NV G E L V P
Sbjct: 439 ISWKKGDKAVRENKRIAILPDGTLRILNASKSDEGKYICQGENVFGSAEIIASLSVKE-P 497
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E+
Sbjct: 498 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFESIRAQAS 557
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V + E+ +++AT+ W
Sbjct: 558 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIIEEITESTATLSW 617
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 618 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVEYEF 672
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 673 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 732
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 733 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 791
Query: 480 VTI 482
V I
Sbjct: 792 VVI 794
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 108/282 (38%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G P Y W RNG ++ LE RY + D I + +D
Sbjct: 41 DEKKVALNCEVRGNPAPNYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 95
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N + S + +F R S EG V + C+P +P+ +
Sbjct: 96 HYQCLAVNTFGSILSREAILQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 154
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 155 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 214
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 215 LRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPVPTITWMKV-NGYVPSKARL 273
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 274 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 307
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 150 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 205
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 206 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPVPTITWMKVNG 265
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ S R + + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 266 YVPSKARLRKSQ-AVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 323
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + L + + G+L I N
Sbjct: 324 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPL-------LPQSRVEMVNGVLMIHNV 374
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 375 NQSDAGMYQCLAENKYGAIYASAELKILASAP 406
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F V A N GYG PSS T P QAPS + + +LS+ WEP+
Sbjct: 872 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQ-QGSELSLGWEPVRPLANE 929
Query: 417 APNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G G
Sbjct: 930 SEVLGYKVFYRQEGHSNSQVIETQKPQ-----AVVPLPDAGVYI---IEVRAYSEGGDGT 981
Query: 476 ESEVVTI 482
S + +
Sbjct: 982 ASSQIRV 988
>gi|114645302|ref|XP_509005.2| PREDICTED: contactin-1 isoform 12 [Pan troglodytes]
gi|410352791|gb|JAA42999.1| contactin 1 [Pan troglodytes]
Length = 1018
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 680 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 190/499 (38%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 711
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 712 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 769
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 KDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGAKVLSSS 823
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 824 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 877
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+++
Sbjct: 878 FIEVGACNSAGCGPPSDMI 896
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|327266142|ref|XP_003217865.1| PREDICTED: contactin-6-like [Anolis carolinensis]
Length = 1036
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 233/480 (48%), Gaps = 21/480 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
W C+A G P +Y W +NG+ PL ++R I++ LTI LN D +YQC
Sbjct: 331 FMWECKATGKPMPSYYWLKNGQ-------PLSPEERIQIENGTLTITMLNIS-DSGLYQC 382
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ + YS+A+LRV+ P F K ++ + GG +TI C P+A+PK WKK
Sbjct: 383 VAENKYGSIYSNAELRVIASAPDFSKNLMKKISVVHMGGEITIECKPDASPKAAITWKKG 442
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R I ++G+L I V++ D+GIY+C A N G+ + G LIV +
Sbjct: 443 TESLKQSKRICILDDGSLKIYNVTKSDAGIYTCIAMNQFGVARNSGNLIVKER-TIINTP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + + ++ L C + ++VA+IW+ NG I + E G L+ I
Sbjct: 502 PSNMDVTVGESIVLPCQVSKDPSVEVAFIWSFNGDVIDFKRKITHFERAGGESVGDLM-I 560
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C V++ + +S +IV G PG P V + V T+A + W G N
Sbjct: 561 RNIQLNHSGKYTCTVQTAMDILSETAEIIVRGTPGPPKDVSIEHVSSTTAVLNWRSGTDN 620
Query: 306 GRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
PI Y I RT ++ W VS VI GR + L PW YEF+V+A
Sbjct: 621 NSPIQIYTIQTRTPFSVGWQAVSTVPEVIN-------GRTHTATVVDLNPWVEYEFRVVA 673
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
GN +G GEPS+PS T A P AP+ + GGGG +L I+WEP+P E QN Y
Sbjct: 674 GNSVGIGEPSAPSELLRTKASIPTVAPANVSGGGGSRSELVITWEPIPEELQNGDGFGYI 733
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
I +R T + ++ + + R S +EVKV N G G S + ++
Sbjct: 734 IMFRPLGSTSW-TKAVAASVEASKYIYRNDSITPLFPFEVKVGVFNHEGVGTLSPIYIVY 792
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 125/322 (38%), Gaps = 34/322 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++ C G P Y W RNG ++ L Y + L I + ++D YQ
Sbjct: 43 EVILNCTGRGRPSPFYRWKRNGTDID-----LTMSYHYRLDGGSLAINNPHKKQDIGTYQ 97
Query: 66 CRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVW 123
C N T S A+L+ L+ +F+ + S EG V + C P + W
Sbjct: 98 CLVTNSFGTILSRKAKLQFAYLE-NFETKA-RSTVSVREGQGVVLLCGPPPHHGDLSYAW 155
Query: 124 KKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLH 178
+ N + RR + E GNL I+ V D G Y+C N +G +VL
Sbjct: 156 IFNDNPLYVQEDSRRFVSQETGNLYIAKVEPSDVGNYTCVVINTEAKQSVQGPPTPLVLR 215
Query: 179 G--------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
P + P I +A +++L C A + +++ +D N
Sbjct: 216 SDGVMGEYEPKIEVRFPEAIQVAKGSSIKLECFALGNPVPSISW---------RRIDGNP 266
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
L + I+ G+LEI N D YEC+ + G+ + + + + P G++ V
Sbjct: 267 L-SRKISTFKGILEIPNFQQEDEATYECIAGNVRGRNAARGQLFIYALPEWNKGLENAHV 325
Query: 291 HKTSATIQWTDGATNGRPITHY 312
T W AT G+P+ Y
Sbjct: 326 -SLYDTFMWECKAT-GKPMPSY 345
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 36/276 (13%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W + N L +++ R F+ L I + P D Y C N +
Sbjct: 150 DLSYAW-----IFNDNPLYVQEDSRRFVSQETGNLYIAKVEPS-DVGNYTCVVINTEAKQ 203
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L L+ P + R E+ A +G ++ + C P P W++
Sbjct: 204 SVQGPPTPLVLRSDGVMGEYEPKIEVRFPEAIQVA-KGSSIKLECFALGNPVPSISWRRI 262
Query: 126 DGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DGN + RKI G L I ++D Y C A NV G + ++G+L + P + +
Sbjct: 263 DGNPLS----RKISTFKGILEIPNFQQEDEATYECIAGNVRGRNAARGQLFIYALPEWNK 318
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
L ++ + C A + + +Y W NG + + I I+ G L
Sbjct: 319 GL-ENAHVSLYDTFMWECKATGKPM--PSYYWLKNGQPLSPEE-------RIQIENGTLT 368
Query: 245 ITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
IT + +D+G Y+CV ++ G I + + VI P
Sbjct: 369 ITMLNISDSGLYQCVAENKYGSIYSNAELRVIASAP 404
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 187/507 (36%), Gaps = 64/507 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++T C+ P +W + E L+ R I D+ Y + D +Y
Sbjct: 421 GEITIECKPDASPKAAITWKKGTE-------SLKQSKRICILDDGSLKIYNVTKSDAGIY 473
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ +S L ++ + P + GE ++ + C P + F+
Sbjct: 474 TCIAMNQFGVARNSGNL-IVKERTIINTPPSNMDVTVGE--SIVLPCQVSKDPSVEVAFI 530
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G++I + FE G+L+I + + SG Y+CT + +IV
Sbjct: 531 WSFNGDVIDFKRKITHFERAGGESVGDLMIRNIQLNHSGKYTCTVQTAMDILSETAEIIV 590
Query: 177 LHGPSYYEQLPPKITIAAHRN-----LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
P PPK H + L R + + I T +G ++ +
Sbjct: 591 RGTPG-----PPKDVSIEHVSSTTAVLNWRSGTDNNSPIQIYTIQTRTPFSVGWQAVSTV 645
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P + I+G T EYE V ++VG + TK ++ P
Sbjct: 646 --PEV-INGRTHTATVVDLNPWVEYEFRVVAGNSVGIGEPSAPSELLRTKASIPTVAPAN 702
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R +++W + E
Sbjct: 703 VSGGGG----SRSELVITWEPIPEELQNGDGF-GYIIMFRPLGSTSWTKAVAASV--EAS 755
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY--NTPADKPYQAPSRIGG 395
+Y R ++ + P +E KV N G G + SP Y + D+P AP+
Sbjct: 756 KYIYRNDS-----ITPLFPFEVKVGVFNHEGVG---TLSPIYIVYSGEDEPQIAPTGASV 807
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 455
++ +SW P+ + + Y++ + + + + +K GN I V I +
Sbjct: 808 QSISASEMEVSWNPVAWNRHTGRVLGYEVLYWTDDSRDSTTSKVKVSGN--ITVRNITNL 865
Query: 456 FYYTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 866 KPNTLYFASVRAFNTAGTGPSSVPVNV 892
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 16/197 (8%)
Query: 88 PSFKKRPLESETYA--GEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNL 144
P F + P + TY+ E V + C P P + WK++G I + + G+L
Sbjct: 24 PIFIQEPFDV-TYSVNSEDPEVILNCTGRGRPSPFYRWKRNGTDIDLTMSYHYRLDGGSL 82
Query: 145 LI-SPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
I +P + D G Y C TN G S K +L + ++ + +++ + + L C
Sbjct: 83 AINNPHKKQDIGTYQCLVTNSFGTILSRKAKLQFAYLENFETKARSTVSVREGQGVVLLC 142
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
D++Y W N + + E ++ + G L I +D G Y CVV +
Sbjct: 143 GPPPHH-GDLSYAWIFND---NPLYVQEDSRRFVSQETGNLYIAKVEPSDVGNYTCVVIN 198
Query: 263 TVGKISTKTTVIVEGPP 279
T K S V+GPP
Sbjct: 199 TEAKQS------VQGPP 209
>gi|395841523|ref|XP_003793584.1| PREDICTED: contactin-1 isoform 2 [Otolemur garnettii]
Length = 1007
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 247/483 (51%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D +T +
Sbjct: 331 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHKGELRLYD----------VTFDH------ 374
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 375 AGMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 434
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L IS ++R+D+GIY+C A N G + G L++ P
Sbjct: 435 FSWSKGTEWLVNSSRILIWEDGSLEISNITRNDAGIYTCFAENNRGKANNTGTLVITD-P 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 494 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFTRENIHYQRNFMLDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 554 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIDDIRATSVGLTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I A+T + W +V E G EA+ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYTIQAKTILSDDWKDVKTDPPIIE-----GNMEAARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 669 RVVATNTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 729 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLT 787
Query: 480 VTI 482
I
Sbjct: 788 AVI 790
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 30 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 89 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDKGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 239
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKS 210
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 211 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTLMGQNVTLECFALGNPVPDIRWRKVLEP 270
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D + R+ V P +
Sbjct: 271 MPSTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDRHQARIYVQAFPEW 322
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 323 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHKGE 364
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F AG Y+C+ ++T G I
Sbjct: 365 LRLYDVTFDHAGMYQCIAENTHGAI 389
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 187/494 (37%), Gaps = 57/494 (11%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 425 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEISNIT-RNDAGIYTCFAE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 477 NNRGKANNTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 535
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFTRENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D +++T I+G +
Sbjct: 596 PGGL--RIDDIRATSVGLTWSRGSDNHSPISK-YTIQAKTILSDDWKDVKTDPPIIEGNM 652
Query: 243 LEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGPPGLPGGVQVVEVHKTSA 295
EYE V +T +G+ S + I P P V
Sbjct: 653 EAARAVDLIPWMEYEFRVVATNTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGGSNREL 712
Query: 296 TIQWTDGATNGRPIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRKEAS 346
TI W P++ HY I+A ++ W V+ V + RY + E
Sbjct: 713 TITWA-------PLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDET- 762
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ P + ++ KV A N G G P S + N+ D P +AP+ +G ++S+
Sbjct: 763 ----MSPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGLKVLSSSEISVY 817
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
W+ + + I Y ++ + +EY R+ + T+Y V+V
Sbjct: 818 WKHVLEKVVETYQIRYWAGHDREEAAHRIQVSSQEYS------ARLENLLPDTQYFVEVG 871
Query: 467 AINDVGPGPESEVV 480
A N G GP S+V+
Sbjct: 872 ACNSAGCGPPSDVI 885
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 47 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 98
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 99 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 155
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 156 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKSVFSKF 215
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 216 IPLIPIPERTTKPYPADIVVQFKDIYTLMGQNVTLECFALGNPVPD---------IRWRK 266
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 267 VLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDRHQARIYVQAFPEWVEHI 326
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 327 NDTEV-DIGSDLYWPCVAT-GKPI 348
>gi|403269330|ref|XP_003926702.1| PREDICTED: contactin-1 isoform 2 [Saimiri boliviensis boliviensis]
Length = 1007
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 331 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 375
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 376 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 434
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 435 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 494 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 554 NGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 669 RVVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 729 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 787
Query: 480 VTI 482
I
Sbjct: 788 AVI 790
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 30 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 89 INNPDKQKDAGIYYCLASNSYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 239
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 210
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 211 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 270
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 271 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 322
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 323 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 364
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 365 LRLYDVTFENAGMYQCIAENTHGAI 389
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 176/491 (35%), Gaps = 51/491 (10%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 425 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 477 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 535
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 596 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 652
Query: 243 LEITNASFADAGEYE--CVVKSTVGK-----ISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
EYE V +T+G+ S K P P V
Sbjct: 653 EAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNREL 712
Query: 296 TIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W N I +K W V + RY + E
Sbjct: 713 TITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKV------TVTNPDTGRYVHKDE----- 761
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + ++ KV A N G G P S N+ D P +AP+ +G ++S+ WE
Sbjct: 762 TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEH 820
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + + I Y ++ T +EY R+ + T+Y ++V A N
Sbjct: 821 VLEKIVESYQIRYWAAHDREEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACN 874
Query: 470 DVGPGPESEVV 480
G GP S+ +
Sbjct: 875 SAGCGPPSDRI 885
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 47 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 98
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 99 GIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 155
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 156 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 215
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 216 IPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 266
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 267 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 326
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 327 NDTEV-DIGSDLYWPCVAT-GKPI 348
>gi|126336359|ref|XP_001373886.1| PREDICTED: contactin-6 [Monodelphis domestica]
Length = 1033
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 233/481 (48%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y+W +NGE P+ +DR I++ L I LN D YQ
Sbjct: 339 SLLWECRASGSPIPSYTWLKNGE-------PIVPEDRIHIENGSLMITVLNLS-DSGFYQ 390
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRV P F K PL+ + GGNVTI C P A+P+ WKK
Sbjct: 391 CVAENKYQTIYTNAELRVRASAPDFSKNPLQKISIVQVGGNVTIECKPMASPRAMVSWKK 450
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
II R I ++G+L I VS+ D+G Y+C A N G+ ++ G L++ +
Sbjct: 451 GTEIIRQSKRFFILDDGSLNIYNVSKLDAGTYTCIAKNQFGIAKASGNLVIKER-TIITV 509
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
PP++ + ++ L C + ++V + W+ NG I D I G G
Sbjct: 510 PPPQMDVTVGESIVLPCQVFHDPSVEVVFTWSFNGQVI---DFQRGVAHFERIGGESVGD 566
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I +G+Y C+V++ + +S +IV GPPG P +++ + T++ + W G
Sbjct: 567 LMIREIQLNHSGKYVCMVQTILDSLSAVADIIVRGPPGPPNNLRIENISSTTSQLCWGPG 626
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI Y I RT ++ W VS + +G+ + L PW YEF+V+
Sbjct: 627 VDNNSPIQIYTIQTRTPFSVGWLAVSTI-----PEILSGKMHTATVVGLNPWVEYEFRVV 681
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 682 AGNSIGIGEPSKPSKLLRTKAAVPIVAPTNISGGGGSRSELVITWESIPEELQNGEGFGY 741
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R + ++ V R S + +EVKV N+ G G S +
Sbjct: 742 IIMFRPVGSLMWTKASVASV-ETSKYVYRNESLTPLSPFEVKVGVYNNEGEGTLSPATVV 800
Query: 483 W 483
+
Sbjct: 801 Y 801
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 182/500 (36%), Gaps = 50/500 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++T C+ P SW + E++ R+FI D+ Y + D Y
Sbjct: 430 GNVTIECKPMASPRAMVSWKKGTEII-------RQSKRFFILDDGSLNIYNVSKLDAGTY 482
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C AKNQ +S L V+ + P + + GE ++ + C P + F
Sbjct: 483 TCIAKNQFGIAKASGNL-VIKERTIITVPPPQMDVTVGE--SIVLPCQVFHDPSVEVVFT 539
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G +I FE G+L+I + + SG Y C + + +IV
Sbjct: 540 WSFNGQVIDFQRGVAHFERIGGESVGDLMIREIQLNHSGKYVCMVQTILDSLSAVADIIV 599
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P L + + L + + I T +G + ++ + P I
Sbjct: 600 RGPPGPPNNLRIENISSTTSQLCWGPGVDNNSPIQIYTIQTRTPFSVGWLAVSTI--PEI 657
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
+ G + T EYE V +++G + TK V + P + GG
Sbjct: 658 -LSGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSKLLRTKAAVPIVAPTNISGGG 716
Query: 286 QVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG Y I+ R + W S V E +Y R
Sbjct: 717 G----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSLMWTKAS--VASVETSKYVYR 769
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E+ L P S +E KV N G G SP+ T D+P AP+ +
Sbjct: 770 NES-----LTPLSPFEVKVGVYNNEGEGT-LSPATVVYTGEDEPQLAPTGASVQSYSSSE 823
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ I+W + + + Y++ + ++ E + ++ GNV + I T Y
Sbjct: 824 VDITWNAIAWNRSTGRVLGYEVLYWTEDSKETSAGKIRVRGNVTTKI--ITGLKANTIYF 881
Query: 463 VKVQAINDVGPGPESEVVTI 482
V+A N G GP S V I
Sbjct: 882 ATVRAYNTAGSGPSSAPVNI 901
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 36/280 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM- 63
+++ C A G P Y W +NG ++ + R +++ NP A+
Sbjct: 49 SEIILNCAANGYPVPDYRWKQNGTDID---FTMSYHHRLVGGSLIIS----NPHIAEAIG 101
Query: 64 -YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
YQC A N L T S A+L+ ++ K AG+G V +FC P F
Sbjct: 102 IYQCLATNPLGTIVSRKAKLQFAYIENFETKTRSTVSVLAGQG--VVLFCGPPPYSGDVF 159
Query: 122 -VWKKDGNI--IGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLI 175
W + N + RR I + GNL I+ V D G Y+C TN+ +G +
Sbjct: 160 YAWTYNDNPFPVQEASRRFISQATGNLYIAKVEPSDVGNYTCIVTNMEAQKRVQGPPTPL 219
Query: 176 VLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
VL + PKI + A ++L C A + D+++ +D
Sbjct: 220 VLRSDGVMGEYEPKIEVRFPEIMHAAKGSTIKLECFALGNPVPDISW---------RKLD 270
Query: 228 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ L + G++ I N D G YEC+ + G+
Sbjct: 271 GSPLARKIQYSKSKGMIAIPNFQEEDEGSYECIAGNLRGR 310
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 14/196 (7%)
Query: 88 PSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLL 145
P+F + P + G E + + C P P + WK++G +I + G+L+
Sbjct: 31 PNFTQEPQDLIYSLGVEDSEIILNCAANGYPVPDYRWKQNGTDIDFTMSYHHRLVGGSLI 90
Query: 146 IS-PVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 203
IS P + GIY C ATN G S K +L + ++ + +++ A + + L C
Sbjct: 91 ISNPHIAEAIGIYQCLATNPLGTIVSRKAKLQFAYIENFETKTRSTVSVLAGQGVVLFCG 150
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
DV Y WT+N + E I+ G L I +D G Y C+V +
Sbjct: 151 PPPYS-GDVFYAWTYND---NPFPVQEASRRFISQATGNLYIAKVEPSDVGNYTCIVTNM 206
Query: 264 VGKISTKTTVIVEGPP 279
+ V+GPP
Sbjct: 207 EAQKR------VQGPP 216
>gi|345786236|ref|XP_541801.3| PREDICTED: contactin-6 isoform 1 [Canis lupus familiaris]
Length = 1028
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 SLFWECRASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ + GG++TI C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRAVISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G+ ++ G L+V +
Sbjct: 446 GMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKER-TVITI 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V +IW+ NG I DL + T I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI---DLKKGVTHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ N PI + + ART ++ W + + G+ + L PW YEF+V+
Sbjct: 622 SDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILNGKTYNATVIGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS S T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I R T + + + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMLRPVGSTSWTKKRVPSVESSRF-VYRNESITPLSPFEVKVGVYNNEGEGSLSTVSIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 108/294 (36%), Gaps = 36/294 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
++++ C A G P Y W +NG ++ Y + L I ++D +
Sbjct: 43 KSEIILNCAATGYPSPHYRWKQNGTDID-----FIMSYHYRLDGGNLAISSPRTDQDIGI 97
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF-- 121
YQC A N L T S F+ + S EG V + C P P F
Sbjct: 98 YQCLATNTLGTILSRKAKLQFAYIEDFETK-TRSMVSVREGQGVVLLC----GPPPHFGD 152
Query: 122 ---VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W + N + ++ F E GNL I+ V D G Y+C TN +G
Sbjct: 153 LSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPT 212
Query: 176 VL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
L + P + P I A +++L C A + D+++ G
Sbjct: 213 PLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGNPLPGK 272
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 273 VKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 318
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 184/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+T C+ P SW R E L R F+ ++ Y D Y
Sbjct: 425 GDITIECKPNAFPRAVISWKRGME-------SLRQSKRVFLSEDGSLKIYNVTRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGVAKNTGSLVVKERTVITIPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ F+W +G++I FE G+L+I + + SG Y CT +
Sbjct: 530 EVVFIWSFNGDVIDLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + + + +G ++ +
Sbjct: 590 ADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R +++W + V E
Sbjct: 707 INGGGG----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTSW--TKKRVPSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ + P S +E KV N G G S+ S Y+ D+P AP
Sbjct: 760 RFVYRNES-----ITPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQLAPGGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNSAGAGPSSPPVNV 896
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRY 76
D++Y+W N L + ED+ R+ Q+ L I + P D Y C N+ R
Sbjct: 152 DLSYAWTFNDNPLYVQ----EDKRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQRS 206
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L + P + R E+ A + +V + C P P W++ D
Sbjct: 207 VQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRLD 265
Query: 127 GNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
GN + G+ K ++ +L P ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 266 GNPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQ 322
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + + Y W NG R LN E I I+ G L I
Sbjct: 323 KIQNTYLSIYDSLFWECRASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLII 373
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 374 TMLNVSDSGVYQCAAEN 390
>gi|395841521|ref|XP_003793583.1| PREDICTED: contactin-1 isoform 1 [Otolemur garnettii]
Length = 1018
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 247/483 (51%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D +T +
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHKGELRLYD----------VTFDH------ 385
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 386 AGMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L IS ++R+D+GIY+C A N G + G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEISNITRNDAGIYTCFAENNRGKANNTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFTRENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIDDIRATSVGLTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I A+T + W +V E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQAKTILSDDWKDVKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 680 RVVATNTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLT 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTLMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDRHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHKGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFDHAGMYQCIAENTHGAI 400
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 179/491 (36%), Gaps = 51/491 (10%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEISNIT-RNDAGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANNTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFTRENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D +++T I+G +
Sbjct: 607 PGGL--RIDDIRATSVGLTWSRGSDNHSPISK-YTIQAKTILSDDWKDVKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGPPGLPGGVQVVEVHKTSA 295
EYE V +T +G+ S + I P P V
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGGSNREL 723
Query: 296 TIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W N I +K W V + RY + E
Sbjct: 724 TITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKV------TVTNPDTGRYVHKDET---- 773
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + ++ KV A N G G P S + N+ D P +AP+ +G ++S+ W+
Sbjct: 774 -MSPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGLKVLSSSEISVYWKH 831
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + I Y ++ + +EY R+ + T+Y V+V A N
Sbjct: 832 VLEKVVETYQIRYWAGHDREEAAHRIQVSSQEYS------ARLENLLPDTQYFVEVGACN 885
Query: 470 DVGPGPESEVV 480
G GP S+V+
Sbjct: 886 SAGCGPPSDVI 896
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDIYTLMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDRHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|345786238|ref|XP_003432801.1| PREDICTED: contactin-6 [Canis lupus familiaris]
Length = 956
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 262 SLFWECRASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 313
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ + GG++TI C P A P+ WK+
Sbjct: 314 CAAENKYQIIYANAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRAVISWKR 373
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G+ ++ G L+V +
Sbjct: 374 GMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKER-TVITI 432
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V +IW+ NG I DL + T I G G
Sbjct: 433 PPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI---DLKKGVTHFERIGGESVGD 489
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G
Sbjct: 490 LMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPG 549
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ N PI + + ART ++ W + + G+ + L PW YEF+V+
Sbjct: 550 SDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILNGKTYNATVIGLSPWVEYEFRVV 604
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS S T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 605 AGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGY 664
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I R T + + + + V R S + +EVKV N+ G G S V +
Sbjct: 665 IIMLRPVGSTSWTKKRVPSVESSRF-VYRNESITPLSPFEVKVGVYNNEGEGSLSTVSIV 723
Query: 483 W 483
+
Sbjct: 724 Y 724
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 184/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+T C+ P SW R E L R F+ ++ Y D Y
Sbjct: 353 GDITIECKPNAFPRAVISWKRGME-------SLRQSKRVFLSEDGSLKIYNVTRSDAGSY 405
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ ++ L V+T+ PS + + GE ++ + C P
Sbjct: 406 TCIATNQFGVAKNTGSLVVKERTVITIPPS------KMDVTVGE--SIVLPCQVSHDPSI 457
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ F+W +G++I FE G+L+I + + SG Y CT +
Sbjct: 458 EVVFIWSFNGDVIDLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAV 517
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + + + +G ++ +
Sbjct: 518 ADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTV 577
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 578 --PEI-LNGKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTN 634
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R +++W + V E
Sbjct: 635 INGGGG----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTSW--TKKRVPSVESS 687
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ + P S +E KV N G G S+ S Y+ D+P AP
Sbjct: 688 RFVYRNES-----ITPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPQLAPGGTSVQS 741
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 742 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 799
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 800 NTIYFASVRAYNSAGAGPSSPPVNV 824
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTRY 76
D++Y+W N L + ED+ R+ Q+ L I + P D Y C N+ R
Sbjct: 80 DLSYAWTFNDNPLYVQ----EDKRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQRS 134
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L + P + R E+ A + +V + C P P W++ D
Sbjct: 135 VQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRLD 193
Query: 127 GNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
GN + G+ K ++ +L P ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 194 GNPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQ 250
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + + Y W NG R LN E I I+ G L I
Sbjct: 251 KIQNTYLSIYDSLFWECRASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLII 301
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 302 TMLNVSDSGVYQCAAEN 318
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 93/255 (36%), Gaps = 31/255 (12%)
Query: 43 YFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG 102
Y + L I ++D +YQC A N L T S F+ + S
Sbjct: 5 YRLDGGNLAISSPRTDQDIGIYQCLATNTLGTILSRKAKLQFAYIEDFETK-TRSMVSVR 63
Query: 103 EGGNVTIFCNPEAAPKPKF-----VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDS 154
EG V + C P P F W + N + ++ F E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDV 119
Query: 155 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 204
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGNPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 231
Query: 265 GKISTKTTVIVEGPP 279
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
>gi|403269328|ref|XP_003926701.1| PREDICTED: contactin-1 isoform 1 [Saimiri boliviensis boliviensis]
Length = 1018
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 680 RVVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNSYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 176/491 (35%), Gaps = 51/491 (10%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVGK-----ISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
EYE V +T+G+ S K P P V
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNREL 723
Query: 296 TIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W N I +K W V + RY + E
Sbjct: 724 TITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKV------TVTNPDTGRYVHKDE----- 772
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + ++ KV A N G G P S N+ D P +AP+ +G ++S+ WE
Sbjct: 773 TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEH 831
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + + I Y ++ T +EY R+ + T+Y ++V A N
Sbjct: 832 VLEKIVESYQIRYWAAHDREEAANRVQVTSQEYS------ARLENLLPDTQYFIEVGACN 885
Query: 470 DVGPGPESEVV 480
G GP S+ +
Sbjct: 886 SAGCGPPSDRI 896
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|410899609|ref|XP_003963289.1| PREDICTED: contactin-4-like [Takifugu rubripes]
Length = 1027
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 240/489 (49%), Gaps = 37/489 (7%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G P +Y W +NGE L+ +DR + + VL I LN D MYQC
Sbjct: 337 LVWECKANGKPKPSYRWLKNGEPLD------HMEDRLQVNNGVLNITSLNLA-DIGMYQC 389
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ +++A+LRV+ + P F + L+++T A +GG+V I C P +P+ W+K
Sbjct: 390 VAENRHGRVFTNAELRVVAIAPDFSQNLLKAQTLARQGGDVLIECKPRMSPRGIISWRKG 449
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + +NG+L IS V+R D G+Y+C A N G+ S G L+V P+
Sbjct: 450 KEALRENHRVTVLDNGSLRISNVTRLDDGLYTCVARNQFGVASSAGSLLVKE-PTAITSP 508
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM-DLNELETPNINIDGGLL 243
+ + ++ L C + L++ + W N + GN+ E G +
Sbjct: 509 AGHLDVTVGESIVLPCQVSHDPTLELKFTWFFNEQLIHFGNLWAFFEKVGGVSERSSGDI 568
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N AG+Y C V++ V +S T V+V GPPG PG +V V + +A++ W GA
Sbjct: 569 MIRNIQPKHAGKYTCAVQTKVDSVSIATDVVVRGPPGPPGDCRVTAVTENTASVSWAPGA 628
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWSTYEFKVI 362
N PI Y I ART + W V+ V + G K+ S + L PW YEF+V+
Sbjct: 629 DNYSPILSYAIQARTPFFLGWQAVN------TVPKLLGGKQLSATVIDLNPWVEYEFRVL 682
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+R+ GGGG +L I+WEP+P E Q+ Y
Sbjct: 683 ATNSIGTGEPSRPSKKARTRETPPRVTPARVNGGGGGHSELVITWEPVPEELQSGSGFGY 742
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---------YTEYEVKVQAINDVGP 473
+ +R L G + AV + Y ++ Y+VKV N+ G
Sbjct: 743 VVAFRP----------LGAQGWMQAAVTSPEASRYVFKNESIPPFSPYQVKVGVYNNRGE 792
Query: 474 GPESEVVTI 482
GP S V TI
Sbjct: 793 GPFSPVTTI 801
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 135/330 (40%), Gaps = 38/330 (11%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+N+ ++ ++CEA G P Y W N ++ RY + L I LN + D
Sbjct: 43 ENRKEVVFSCEAQGHPPPFYRWKLNDSFIHPR-----PGSRYSLVGGNLHISRLNKDEDV 97
Query: 62 AMYQCRAKNQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
+YQC N T R +S + L + ++ P+ EG V + C P +
Sbjct: 98 GIYQCLGSNSFGTIVSREASLHVAYLEDFKTHRRNPVRVR----EGQGVVLLCGPPSHSG 153
Query: 119 P---KFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG-- 172
K+++ + + + RR + + GNL I+ V D G Y+C TN +G
Sbjct: 154 ELTFKWIFNEYPSFVTQDTRRFVSQKTGNLYIAKVDPSDVGNYTCVVTNTVTKSSVQGPP 213
Query: 173 -----RLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
R+ + G P Q P + +A ++L C A + +++ G G
Sbjct: 214 TPLVLRVDGVMGEYEPKIEVQFPEVVPVAKSSTVKLECFALGNPVPTISW-RREGGASFG 272
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 284
++N G+LEI DAG YECV +++ G+ K + P L
Sbjct: 273 -------RKVDVNKASGVLEIPYFQMEDAGVYECVAENSRGRNLVKGKLSFYAAPQLTEK 325
Query: 285 VQVVEVHKT-SATIQWTDGATNGRPITHYK 313
Q +V KT T+ W + NG+P Y+
Sbjct: 326 PQ--DVQKTIDDTLVW-ECKANGKPKPSYR 352
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 191/525 (36%), Gaps = 99/525 (18%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAM 63
D+ C+ P SW + E L + R + DN ++R N R D +
Sbjct: 428 GDVLIECKPRMSPRGIISWRKGKEAL-------RENHRVTVLDNG-SLRISNVTRLDDGL 479
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-----GGNVTIFCNPEAAP- 117
Y C A+NQ S+ L V K P + AG G ++ + C P
Sbjct: 480 YTCVARNQFGVASSAGSLLV--------KEPTAITSPAGHLDVTVGESIVLPCQVSHDPT 531
Query: 118 -KPKFVWKKDGNIIGSGGRRKIFE---------NGNLLISPVSRDDSGIYSCTATNVHGM 167
+ KF W + +I G FE +G+++I + +G Y+C A
Sbjct: 532 LELKFTWFFNEQLIHFGNLWAFFEKVGGVSERSSGDIMIRNIQPKHAGKYTC-AVQTKVD 590
Query: 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY------------- 214
S +V+ GP PP R +A TE V++
Sbjct: 591 SVSIATDVVVRGPPG----PPG---------DCRVTAVTENTASVSWAPGADNYSPILSY 637
Query: 215 -IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST----VGKIS- 268
I +G +N + P + + G L T EYE V +T G+ S
Sbjct: 638 AIQARTPFFLGWQAVNTV--PKL-LGGKQLSATVIDLNPWVEYEFRVLATNSIGTGEPSR 694
Query: 269 -TKTTVIVEGPPGL-PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTN 319
+K E PP + P V + I W G+ G Y + R
Sbjct: 695 PSKKARTRETPPRVTPARVNGGGGGHSELVITWEPVPEELQSGSGFG-----YVVAFRPL 749
Query: 320 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 379
W + V E RY + E+ + P+S Y+ KV N G G P SP
Sbjct: 750 GAQGWMQAA--VTSPEASRYVFKNES-----IPPFSPYQVKVGVYNNRGEG-PFSPVTTI 801
Query: 380 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW--RKKNDTEFQSE 437
++ ++P +AP R+ ++ ++W+PL + Y +W R+K DT +
Sbjct: 802 HSAEEEPSRAPGRLRARSVSASEVEVTWKPLAWSNRRILG-YELQYWSERQKPDT---AS 857
Query: 438 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
++ GN ++R Y V ++A N G GP+S V +
Sbjct: 858 VIRTVGNKTSVLIRDLEG--RCTYYVSLRAYNSAGVGPQSNTVNV 900
>gi|414791|emb|CAA79696.1| contactin [Homo sapiens]
Length = 1018
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 246/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 680 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S +
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLL 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 190/499 (38%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 711
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 712 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 769
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 KDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLLAVINSAQDAPSEAPTEVGVKVLSSS 823
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 824 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 877
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+++
Sbjct: 878 FIEVGACNSAGCGPPSDMI 896
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|344276490|ref|XP_003410041.1| PREDICTED: contactin-3 [Loxodonta africana]
Length = 1042
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/499 (32%), Positives = 243/499 (48%), Gaps = 24/499 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 347 NLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 398
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F + P++ G V + C P A+P WKK
Sbjct: 399 CIAENKHGLVYSSAELKVVASAPDFSRNPMKKLVQVQAGSLVILECKPRASPSAFSFWKK 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R ++ L I+ V++ D G Y+C A N G RL+V P+
Sbjct: 459 GDRIVQKSERISFLKDSGLKITNVTKADVGSYTCIAENQFGKANGTTRLVVTE-PTRITL 517
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P + ++ ++ L C + LLD+ + W NG D + + + G G
Sbjct: 518 APSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGAL---TDFKKEGSHFEKVGGSSSGD 574
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C+V++ V ++S+ +IV G PG P V+VVE+ T+A + W +G
Sbjct: 575 LMIRNIQLKHSGKYVCMVQTGVDRVSSAADLIVRGSPGPPANVKVVEITDTTAQLSWKEG 634
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N P+ Y + ART ++ W V+ + + +D G+ + L PW YEF+V+
Sbjct: 635 TDNHSPVISYSVQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVV 689
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y
Sbjct: 690 ASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGY 749
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + +T+ + V R S ++ YEVKV N+ G GP S V +
Sbjct: 750 VVAFRPYGVTNW-IQTVVTSPDTSRYVFRNESIVPFSRYEVKVGVYNNKGEGPFSPVTAV 808
Query: 483 WH---DPLVIISYVCQGDL 498
+ +P V S V L
Sbjct: 809 FFCRDEPAVAPSQVSADSL 827
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++DSG Y C
Sbjct: 252 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-NGILEIPNFQQEDSGSYEC 310
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ Q I IA NL C A + +Y W N
Sbjct: 311 IAENSRGKNVARGRLTYYAKP-HWVQTIKDIEIAVEDNLYWECRASGKP--KPSYRWLKN 367
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 368 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASA 420
Query: 278 P 278
P
Sbjct: 421 P 421
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPER--DPAM 63
+T+ CEA G P Y W LN + L + RY I N++ I NP R D
Sbjct: 59 ITFNCEARGNPSPHYRW-----QLNGSDIDLSLEYRYKLIGGNLVVI---NPNRNWDIGS 110
Query: 64 YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKP 119
YQC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 111 YQCFATNSLGTVVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSY 168
Query: 120 KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL- 177
+++ + + + RR + E G+L I+ V D G Y+C T++ G L
Sbjct: 169 AWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMVTNARVLGSPTPLV 228
Query: 178 ---------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ P Q P + A ++L C A + + + + + L
Sbjct: 229 LRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKL 288
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N D+G YEC+ +++ GK
Sbjct: 289 RKF--------NGILEIPNFQQEDSGSYECIAENSRGK 318
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 172/469 (36%), Gaps = 63/469 (13%)
Query: 44 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 103
F++D+ L I + + D Y C A+NQ + +L V+T P + GE
Sbjct: 471 FLKDSGLKITNVT-KADVGSYTCIAENQFGKANGTTRL-VVTEPTRITLAPSNMDVSVGE 528
Query: 104 GGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSG 155
+V + C + P F W +G + FE +G+L+I + SG
Sbjct: 529 --SVILPCQVQHDPLLDIMFTWYFNGALTDFKKEGSHFEKVGGSSSGDLMIRNIQLKHSG 586
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEELLDV 212
Y C S LIV P PP K+ QL T+ V
Sbjct: 587 KYVCMVQTGVDRVSSAADLIVRGSPG-----PPANVKVVEITDTTAQLSWKEGTDNHSPV 641
Query: 213 AY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG--- 265
+ +G + + P + IDG T EYE V + +G
Sbjct: 642 ISYSVQARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGE 698
Query: 266 ------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRP---ITHYK 313
K+ T+ V P + GG ++ I W + NG + ++
Sbjct: 699 PSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEELQNGEGFGYVVAFR 754
Query: 314 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373
TNW + V + RY R E+ +VP+S YE KV N G G P
Sbjct: 755 PYGVTNW------IQTVVTSPDTSRYVFRNES-----IVPFSRYEVKVGVYNNKGEG-PF 802
Query: 374 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDT 432
SP D+P APS++ ++ +SW +P + N + Y++ FW
Sbjct: 803 SPVTAVFFCRDEPAVAPSQVSADSLSSSEIEVSWNAIPWKLSNGHLLGYEVRFWNNSGGE 862
Query: 433 EFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
E S +K GN A +R + S Y + V+A N G GP S V
Sbjct: 863 EESSSKVKVSGNETSARLRDLKSNL---AYYMAVRAYNSAGTGPFSATV 908
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 13/195 (6%)
Query: 77 SSAQLRVLTLK-PSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SG 133
SS + L L+ P F K P S G E +T C P P + W+ +G+ I S
Sbjct: 27 SSTHIGELLLQGPVFIKEPSNSIFPVGSEDKKITFNCEARGNPSPHYRWQLNGSDIDLSL 86
Query: 134 GRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKIT 191
R GNL++ +R+ D G Y C ATN G S+ +L + ++ ++ ++
Sbjct: 87 EYRYKLIGGNLVVINPNRNWDIGSYQCFATNSLGTVVSREAKLQFAYLENFKTKMRSTVS 146
Query: 192 IAAHRNLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
+ + + L C H+ EL +Y W N + E ++ + G L I
Sbjct: 147 VREGQGVVLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVE 200
Query: 250 FADAGEYECVVKSTV 264
+D G Y CVV S V
Sbjct: 201 PSDVGNYTCVVTSMV 215
>gi|109108421|ref|XP_001094748.1| PREDICTED: contactin-5 isoform 2 [Macaca mulatta]
Length = 1100
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSSQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N L + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 106/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKSRLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSSQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGIYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|109108423|ref|XP_001094872.1| PREDICTED: contactin-5 isoform 3 [Macaca mulatta]
Length = 1026
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 327 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSSQSRVEMVNGVLMIHNVN-QSD 378
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 379 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 438
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 439 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 497
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 498 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 554
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 555 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 614
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 615 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 669
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 670 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 729
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 730 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 788
Query: 477 SEVVTI 482
S++V I
Sbjct: 789 SQIVVI 794
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 109/282 (38%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 41 DEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 95
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N L + S +F R S EG V + C+P +P+ +
Sbjct: 96 HYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 154
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 155 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 214
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 215 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSRL 273
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 274 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 307
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 106/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 150 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 205
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 206 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 265
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 266 YIPSKSRLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 323
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + + E+ +N G+L I N
Sbjct: 324 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSSQSRVEM----VN---GVLMIHNV 374
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 375 NQSDAGMYQCLAENKYGAIYASAELKILASAP 406
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 872 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 927
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 928 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGIYI---IEVRAYSEGGD 979
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 980 GTASSQIRV 988
>gi|397516456|ref|XP_003828446.1| PREDICTED: contactin-5 [Pan paniscus]
Length = 911
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDREVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R + +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAVLPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ ++SAT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESSAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 109/282 (38%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 115 DEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 169
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N L + S +F R S EG V + C+P +P+ +
Sbjct: 170 HYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 228
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 229 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 288
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 289 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKARL 347
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 348 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 103/272 (37%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + + + G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQS-------RVEMVNGVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
>gi|355566984|gb|EHH23363.1| hypothetical protein EGK_06815, partial [Macaca mulatta]
Length = 1084
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 385 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSSQSRVEMVNGVLMIHNVN-QSD 436
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 437 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 496
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 497 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 555
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 556 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 612
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 613 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 672
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 673 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 727
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 728 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 787
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 788 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 846
Query: 477 SEVVTI 482
S++V I
Sbjct: 847 SQIVVI 852
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 109/282 (38%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 99 DEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 153
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N L + S +F R S EG V + C+P +P+ +
Sbjct: 154 HYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 212
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 213 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 272
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 273 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSRL 331
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 332 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 365
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 106/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 208 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 263
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 264 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 323
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 324 YIPSKSRLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 381
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + + E+ +N G+L I N
Sbjct: 382 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSSQSRVEM----VN---GVLMIHNV 432
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 433 NQSDAGMYQCLAENKYGAIYASAELKILASAP 464
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 930 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 985
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 986 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGIYI---IEVRAYSEGGD 1037
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1038 GTASSQIRV 1046
>gi|41054217|ref|NP_956098.1| contactin-5 [Danio rerio]
gi|55976499|sp|Q7ZW34.1|CNTN5_DANRE RecName: Full=Contactin-5; Flags: Precursor
gi|28279510|gb|AAH45307.1| Zgc:55318 [Danio rerio]
Length = 1056
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 238/495 (48%), Gaps = 40/495 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C A G P TY W RNGE PL Q R + + LTI L + D
Sbjct: 359 LDSGEQLRWECRATGKPRPTYRWLRNGE-------PLSTQSRVEMVNGELTIHRLQ-QAD 410
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ YSSA+L++L P F P+ A G +V++ C P A+PKP+
Sbjct: 411 SGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVR--LIATVGKDVSLECRPRASPKPR 468
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K+ + R + N L I SR D G Y C A N G E L+V P
Sbjct: 469 ISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKE-P 527
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
E P ++ + ++ L C + LDV+++W N N LN + DG
Sbjct: 528 MRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN-----NQPLNTQQ------DG 576
Query: 241 GLLEI--TNASFAD----------AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
G E T +S AD AG+Y C +++ + + ++V GPPG PG V V
Sbjct: 577 GHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVE 636
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E+ ++AT+ W+ G N PIT Y + AR+ + W + + D TG E+++
Sbjct: 637 EITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QTVKTDPDPVTGSMESAMA 691
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L PW YEF+V+A N +G G+PS PS T P AP+ + GG G+ +L ISWE
Sbjct: 692 VDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWE 751
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
P+ E QN Y + +R N T E + + R + T +EV+V
Sbjct: 752 PVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVGVY 810
Query: 469 NDVGPGPESEVVTIW 483
N+ G GP SEVVT++
Sbjct: 811 NNKGDGPFSEVVTVF 825
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 106/271 (39%), Gaps = 33/271 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P TYSW NG +++E RY + D L I + D YQCRA+N
Sbjct: 81 CEARGNPVPTYSWLINGTNVDTEA-----DFRYSLIDGNLIIHNASEVIDYGRYQCRAEN 135
Query: 71 QLKTRYS-SAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVW--KK 125
+ S A L+ L P S K R S EG V + C P + +P+ + W +
Sbjct: 136 SIGIVLSRDALLQFAYLGPFSGKTRGAVS---VREGQGVVLMCAPPSHSPEIIYSWVFNE 192
Query: 126 DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG- 179
+ + RR I E GNL I V D G Y C T TN + + G
Sbjct: 193 LPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGV 252
Query: 180 -----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
P P + A ++L C A + + + M N +
Sbjct: 253 MGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPVPTITW---------RKMSGNIPKKA 303
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ +LEI N D+G YEC ++T G
Sbjct: 304 RLRKSQAVLEIPNIQLEDSGSYECKAENTRG 334
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 182/509 (35%), Gaps = 71/509 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
D++ C P SW +N L + +++N T+R +N R D Y
Sbjct: 454 DVSLECRPRASPKPRISWRKNDRRLQP------SRRIMLLRNN--TLRIINSSRSDEGSY 505
Query: 65 QCRAKNQLKTRYSSAQLR-VLTLKPSFKKR--PLESETYAGEGGNVTIFCNPEAAPK--P 119
CRA+NQ + SA+L VL +K + PL E GE +V + C P
Sbjct: 506 VCRAENQ----FGSAELTTVLLVKEPMRVELSPLRVEVTVGE--SVVLSCKVTHDPSLDV 559
Query: 120 KFVWKKDG---NIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
F+W + N GG + + +L+I + +G Y C A ++
Sbjct: 560 SFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEA 619
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L+V P PP + I + + + + + I T+N + L +
Sbjct: 620 ELLVRGPPG-----PPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLG-WQ 673
Query: 233 TPNINIDGGLLEITNASFADAG-----EYECVVKSTVG---------KISTKTTVIVEGP 278
T + D + +A D E+ V +++G + TK V P
Sbjct: 674 TVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAP 733
Query: 279 PGLPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
+ GG + I W ++ NG Y + R N W + V +
Sbjct: 734 ANVRGG----NGRRHELVISWEPVSEEYQNGEGF-GYIVAFRVNGTRGW--KEKMVTSAD 786
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
Y R E P + +E +V N G G P S + +P + PS +
Sbjct: 787 STTYKYRDE-----TFPPLTPFEVRVGVYNNKGDG-PFSEVVTVFSAEGEPREPPSEVQA 840
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF--QSETLKEYGNVGIAVVRIP 453
++ + W+P P P Y FW+ E + TL N+ ++ +
Sbjct: 841 FAVSSSEIKVLWKP-PSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLD-- 897
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEVVTI 482
T+Y V V+ N G GP S V I
Sbjct: 898 ---GNTQYLVSVKGFNSAGQGPSSTAVKI 923
>gi|343168759|ref|NP_001230200.1| contactin-5 isoform 3 precursor [Homo sapiens]
Length = 911
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 109/282 (38%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 115 DEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 169
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N + + S +F R S EG V + C+P +P+ +
Sbjct: 170 HYQCLATNTVGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 228
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 229 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 288
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 289 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKARL 347
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 348 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 103/272 (37%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + + + G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQS-------RVEMVNGVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
>gi|200057|gb|AAA17403.1| neuronal glycoprotein [Mus musculus]
Length = 1028
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 243/496 (48%), Gaps = 20/496 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L E +R I++ LTI LN D M+QC
Sbjct: 335 LYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENGALTITNLN-VTDSGMFQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+L+V+ P F + P++ G V + C P A+P+ WKK
Sbjct: 387 IAENKHGLIYSSAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R +G L I V++ D+G Y+CTA N G L+V P+
Sbjct: 447 DMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTE-PTRIILA 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + +A ++ L C + LLD+ + W NG D + E + G L+ I
Sbjct: 506 PSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDLM-I 564
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + WT+G +
Sbjct: 565 RNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDS 624
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+ Y + ART ++ W +V + + +D G+ + L PW YEF+++A N
Sbjct: 625 HSPVISYAVQARTPFSVGWQSV--RTVPEVID---GKTHTATVVELNPWVEYEFRIVASN 679
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y +
Sbjct: 680 KIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVA 739
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW-- 483
+R T + + N V R S ++ YEVKV N+ G GP S V T++
Sbjct: 740 FRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSA 798
Query: 484 -HDPLVIISYVCQGDL 498
+P V S++ L
Sbjct: 799 EEEPTVAPSHISAHSL 814
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSL-----DHRYKLNGGNLIV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK R + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTR-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+V+ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WVFNEYPSFVEEDSRRLVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R M
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPQI------NWRRSDGMPFP 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
N+++ N G+LEI N D G YE + +++ GK
Sbjct: 271 NKIKLRKFN---GMLEIQNFQQEDTGSYEGIAENSRGK 305
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKF-NGMLEIQNFQQEDTGSYEG 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P Y+ QL + IA +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWLQLLRDVEIAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G D LE I I+ G L ITN + D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 182/490 (37%), Gaps = 67/490 (13%)
Query: 22 SWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80
S+++ G+++ + +Q R F+ D L I + + D Y C A+NQ +
Sbjct: 441 SFWKKGDMM------VREQARVSFLNDGGLKIMNVT-KADAGTYTCTAENQFGKANGTTH 493
Query: 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKI 138
L V+T P + GE +V + C + P F W +G +
Sbjct: 494 L-VVTEPTRIILAPSNMDVAVGE--SVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSH 550
Query: 139 FE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 192
FE +G+L+I + SG Y C S LIV P E + K+
Sbjct: 551 FEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDE 608
Query: 193 AAHRNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
QL + T+ V + +G + + P + IDG T
Sbjct: 609 ITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSVRTV--PEV-IDGKTHTATVVEL 665
Query: 251 ADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
EYE V + +G K+ T+ P + GG ++ I W
Sbjct: 666 NPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGG----SRSELVITW 721
Query: 300 -------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+G G + ++ + T W + V + RY R E+ +V
Sbjct: 722 DPVPEELQNGGGFGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IV 769
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S YE KV N G G P SP + ++P APS I ++ +SW +P
Sbjct: 770 PFSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPW 828
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAIND 470
+ N + Y++ + E S +K GN AV+R + S YYT V+A N
Sbjct: 829 KLSNGHLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYT----AVRAYNS 884
Query: 471 VGPGPESEVV 480
G GP S V
Sbjct: 885 AGAGPFSATV 894
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 83 VLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE 140
+L P F K P S E +T+ C P P + W+ +G +I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVDSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGV-RIGNMDLNELETPNINIDGGLLEITNASFADAGE 255
L C H+ EL +Y W N D L ++ + G L I +D G
Sbjct: 141 VLLCGPPPHSGEL---SYAWVFNEYPSFVEEDSRRL----VSQETGHLYIAKVEPSDVGN 193
Query: 256 YECVVKSTV 264
Y CVV STV
Sbjct: 194 YTCVVTSTV 202
>gi|134054436|emb|CAM73212.1| zgc:55318 [Danio rerio]
Length = 937
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 238/495 (48%), Gaps = 40/495 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C A G P TY W RNGE PL Q R + + LTI L + D
Sbjct: 359 LDSGEQLRWECRATGKPRPTYRWLRNGE-------PLSTQSRVEMVNGELTIHRLQ-QAD 410
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ YSSA+L++L P F P+ A G +V++ C P A+PKP+
Sbjct: 411 SGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVR--LIATVGKDVSLECRPRASPKPR 468
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K+ + R + N L I SR D G Y C A N G E L+V P
Sbjct: 469 ISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKE-P 527
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
E P ++ + ++ L C + LDV+++W N N LN + DG
Sbjct: 528 MRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN-----NQPLNTQQ------DG 576
Query: 241 GLLEI--TNASFAD----------AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
G E T +S AD AG+Y C +++ + + ++V GPPG PG V V
Sbjct: 577 GHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVE 636
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E+ ++AT+ W+ G N PIT Y + AR+ + W + + D TG E+++
Sbjct: 637 EITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QTVKTDPDPVTGSMESAMA 691
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L PW YEF+V+A N +G G+PS PS T P AP+ + GG G+ +L ISWE
Sbjct: 692 VDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWE 751
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
P+ E QN Y + +R N T E + + R + T +EV+V
Sbjct: 752 PVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVGVY 810
Query: 469 NDVGPGPESEVVTIW 483
N+ G GP SEVVT++
Sbjct: 811 NNKGDGPFSEVVTVF 825
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 106/271 (39%), Gaps = 33/271 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P TYSW NG +++E RY + D L I + D YQCRA+N
Sbjct: 81 CEARGNPVPTYSWLINGTNVDTEA-----DFRYSLIDGNLIIHNASEVIDYGRYQCRAEN 135
Query: 71 QLKTRYS-SAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVW--KK 125
+ S A L+ L P S K R S EG V + C P + +P+ + W +
Sbjct: 136 SIGIVLSRDALLQFAYLGPFSGKTRGAVS---VREGQGVVLMCAPPSHSPEIIYSWVFNE 192
Query: 126 DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG- 179
+ + RR I E GNL I V D G Y C T TN + + G
Sbjct: 193 LPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGV 252
Query: 180 -----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
P P + A ++L C A + + + M N +
Sbjct: 253 MGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPVPTITW---------RKMSGNIPKKA 303
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ +LEI N D+G YEC ++T G
Sbjct: 304 RLRKSQAVLEIPNIQLEDSGSYECKAENTRG 334
>gi|28373129|ref|NP_780775.1| contactin-5 isoform 2 precursor [Homo sapiens]
gi|5672494|dbj|BAA36580.2| hNB-2s [Homo sapiens]
gi|119587397|gb|EAW66993.1| contactin 5, isoform CRA_b [Homo sapiens]
Length = 1026
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 327 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 378
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 379 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 438
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 439 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 497
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 498 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 554
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 555 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 614
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 615 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 669
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 670 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 729
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 730 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 788
Query: 477 SEVVTI 482
S++V I
Sbjct: 789 SQIVVI 794
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 109/282 (38%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 41 DEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 95
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N + + S +F R S EG V + C+P +P+ +
Sbjct: 96 HYQCLATNTVGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 154
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 155 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 214
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 215 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKARL 273
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 274 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 307
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 150 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 205
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 206 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 265
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 266 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 323
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 324 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 374
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 375 NQSDAGMYQCLAENKYGAIYASAELKILASAP 406
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 872 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 927
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 928 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 979
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 980 GTASSQIRV 988
>gi|71297177|gb|AAH39255.1| CNTN5 protein [Homo sapiens]
Length = 617
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 107 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 158
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 159 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 218
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 219 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 277
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 278 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 334
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 335 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 394
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 395 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 449
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 450 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 509
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 510 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 568
Query: 477 SEVVTI 482
S++V I
Sbjct: 569 SQIVVI 574
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 22/270 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T +W + + S+ R VL I + + D +Y+CRA+N
Sbjct: 28 CFALGNPVPTITWMKVNGYIPSKA-------RLRKSQAVLEIPNVQLD-DAGIYECRAEN 79
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
QL+V T +K ++T G + C P+P + W K+G +
Sbjct: 80 SRGKNSFRGQLQVYTYPHWVEKL---NDTQLDSGSPLRWECKATGKPRPTYRWLKNGVPL 136
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-HGPSY-YEQLPP 188
R ++ NG L+I V++ D+G+Y C A N +G + L +L P++ QL
Sbjct: 137 SPQSRVEMV-NGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAPTFALNQLKK 195
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
I + + + + C +++ + G+ + E + I DG L I NA
Sbjct: 196 TIIVTKDQEVVIECKPQGSPKPTISW-------KKGDRAVRENKRIAILPDGS-LRILNA 247
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGP 278
S +D G+Y C ++ G ++ V+ P
Sbjct: 248 SKSDEGKYVCRGENVFGSAEIIASLSVKEP 277
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 18 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQ-AVLEIPNVQLDDAGIYECR 76
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 77 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 133
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 134 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 186
>gi|403262979|ref|XP_003923841.1| PREDICTED: contactin-5 [Saimiri boliviensis boliviensis]
Length = 1100
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 234/486 (48%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL IR +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIRNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F ++ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILAAAPTFALNQVKKTIIVTKDREVIIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYICRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNLIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N L + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPVTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKAR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 103/272 (37%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPVTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + + + G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQS-------RVEMVNGVLMIRNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILAAAP 480
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESDVVGYKVFYRQEGQSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|161611605|gb|AAI55825.1| Zgc:55318 protein [Danio rerio]
Length = 804
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 238/495 (48%), Gaps = 40/495 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C A G P TY W RNGE PL Q R + + LTI L + D
Sbjct: 107 LDSGEQLRWECRATGKPRPTYRWLRNGE-------PLSTQSRVEMVNGELTIHRLQ-QAD 158
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ YSSA+L++L P F P+ A G +V++ C P A+PKP+
Sbjct: 159 SGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVR--LIATVGKDVSLECRPRASPKPR 216
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K+ + R + N L I SR D G Y C A N G E L+V P
Sbjct: 217 ISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKE-P 275
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
E P ++ + ++ L C + LDV+++W N N LN + DG
Sbjct: 276 MRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN-----NQPLNTQQ------DG 324
Query: 241 GLLEI--TNASFAD----------AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
G E T +S AD AG+Y C +++ + + ++V GPPG PG V V
Sbjct: 325 GHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSADSVLAEAELLVRGPPGPPGVVIVE 384
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E+ ++AT+ W+ G N PIT Y + AR+ + W + + D TG E+++
Sbjct: 385 EITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QTVKTDPDPVTGSMESAMA 439
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L PW YEF+V+A N +G G+PS PS T P AP+ + GG G+ +L ISWE
Sbjct: 440 VDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWE 499
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
P+ E QN Y + +R N T E + + R + T +EV+V
Sbjct: 500 PVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVGVY 558
Query: 469 NDVGPGPESEVVTIW 483
N+ G GP SEVVT++
Sbjct: 559 NNKGDGPFSEVVTVF 573
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 109/268 (40%), Gaps = 20/268 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T +W + S +P + R VL I + E D Y+C+A+N
Sbjct: 28 CFALGNPVPTITWRKM-----SGNIP--KKARLRKSQAVLEIPNIQLE-DSGSYECKAEN 79
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
L+V TL P + + ++T G + C P+P + W ++G +
Sbjct: 80 TRGGTAFRGHLQVYTL-PQWIS--MINDTQLDSGEQLRWECRATGKPRPTYRWLRNGEPL 136
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+ R ++ NG L I + + DSG+Y C A N +G S L +L + P ++
Sbjct: 137 STQSRVEMV-NGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVRL 195
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
+++ L C ++ W N R+ L + L I N+S
Sbjct: 196 IATVGKDVSLECRPRASPKPRIS--WRKNDRRLQPSRRIML------LRNNTLRIINSSR 247
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGP 278
+D G Y C ++ G T ++V+ P
Sbjct: 248 SDEGSYVCRAENQFGSAELTTVLLVKEP 275
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 15/181 (8%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P W+K GNI RK L I + +DSG Y C
Sbjct: 18 AAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRK--SQAVLEIPNIQLEDSGSYEC 75
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G +G L V P + + + + L+ C A + Y W N
Sbjct: 76 KAENTRGGTAFRGHLQVYTLPQWISMI-NDTQLDSGEQLRWECRATGKP--RPTYRWLRN 132
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + + + G L I AD+G Y+C+ ++ G I S + ++
Sbjct: 133 GEPLSTQS-------RVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASA 185
Query: 278 P 278
P
Sbjct: 186 P 186
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 183/508 (36%), Gaps = 69/508 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
D++ C P SW +N L + +++N T+R +N R D Y
Sbjct: 202 DVSLECRPRASPKPRISWRKNDRRLQP------SRRIMLLRNN--TLRIINSSRSDEGSY 253
Query: 65 QCRAKNQLKTRYSSAQLR-VLTLKPSFKKR--PLESETYAGEGGNVTIFCNPEAAPK--P 119
CRA+NQ + SA+L VL +K + PL E GE +V + C P
Sbjct: 254 VCRAENQ----FGSAELTTVLLVKEPMRVELSPLRVEVTVGE--SVVLSCKVTHDPSLDV 307
Query: 120 KFVWKKDG---NIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
F+W + N GG + + +L+I + +G Y C A ++
Sbjct: 308 SFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSADSVLAEA 367
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L+V P PP + I + + + + + I T+N + L +
Sbjct: 368 ELLVRGPPG-----PPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLG-WQ 421
Query: 233 TPNINIDGGLLEITNASFADAG-----EYECVVKSTVG---------KISTKTTVIVEGP 278
T + D + +A D E+ V +++G + TK V P
Sbjct: 422 TVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAP 481
Query: 279 PGLPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
+ GG + I W ++ NG Y + R N W + V +
Sbjct: 482 ANVRGG----NGRRHELVISWEPVSEEYQNGEGF-GYIVAFRVNGTRGWKE--KMVTSAD 534
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
Y R E P + +E +V N G G P S + +P + PS +
Sbjct: 535 STTYKYRDE-----TFPPLTPFEVRVGVYNNKGDG-PFSEVVTVFSAEGEPREPPSEVQA 588
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 455
++ + W+P P P Y FW+ D E Q E K+ +G + S
Sbjct: 589 FAVSSSEIKVLWKP-PSPGLGRPQGYEVSFWK---DVE-QEELGKKKRTLGNETNMLLSG 643
Query: 456 F-YYTEYEVKVQAINDVGPGPESEVVTI 482
T+Y V V+ N G GP S V I
Sbjct: 644 LDGNTQYLVSVKGFNSAGQGPSSTAVKI 671
>gi|440911548|gb|ELR61203.1| Contactin-5, partial [Bos grunniens mutus]
Length = 1007
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG LPL Q R + + VL I +N + D
Sbjct: 309 LDSGSPLRWECKATGKPRPTYRWLKNG-------LPLLLQSRIEMVNGVLMIHNVN-QSD 360
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ T Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 361 AGMYQCLAENKYGTIYASAELKILASAPTFALNQLKKTIIIPKDQEVIIECKPQGSPKPT 420
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E + V P
Sbjct: 421 ISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYICRGENVFGSAEITATVSVKE-P 479
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E+
Sbjct: 480 TRIELTPKRTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPIDFEKEGGHFESIRAQAS 539
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 540 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSW 599
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 600 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVELNPWVEYEF 654
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 655 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 714
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S++
Sbjct: 715 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 773
Query: 480 VTI 482
V I
Sbjct: 774 VVI 776
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 104/281 (37%), Gaps = 27/281 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CEA G P Y W RNG ++ LE RY + D I + +D
Sbjct: 23 DEKKVALNCEARGNPIPNYRWLRNGTEID-----LESDYRYSLIDGAFIISNPSEAKDSG 77
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKP--SFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
YQC A N + S + P + K P S + G V
Sbjct: 78 HYQCLAANTFGSILSREVILQFACFPGGTSGKAPATSSGDVRDAGLVPGSGRSSGEIIYS 137
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+V+ + + + RR I E GNL IS V D G Y C T TN + +
Sbjct: 138 WVFNEFPSFVAEDSRRFISQETGNLYISKVQASDVGSYICLVKNTVTNARVLSPPTPLTL 197
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
G P P +T A +++ C A + + ++ NG L
Sbjct: 198 RNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWM-KINGYIPSKSRLR 256
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 257 KSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 289
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 104/271 (38%), Gaps = 25/271 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 133 EIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQASDVGSYICLVKNTVTNARV 188
Query: 78 SAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
+ LTL+ E + A +G V + C P P W K
Sbjct: 189 LSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKINGY 248
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
I S R + + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 249 IPSKSRLRKSQ-AVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-ND 306
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
+ + L+ C A + Y W NG+ + L I + G+L I N +
Sbjct: 307 TQLDSGSPLRWECKATGKP--RPTYRWLKNGLPL-------LLQSRIEMVNGVLMIHNVN 357
Query: 250 FADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+DAG Y+C+ ++ G I S + ++ P
Sbjct: 358 QSDAGMYQCLAENKYGTIYASAELKILASAP 388
>gi|335294754|ref|XP_003129849.2| PREDICTED: contactin-5 [Sus scrofa]
Length = 1026
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 232/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 327 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLLLQSRIEMVNGVLMIHNVN-QSD 378
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ +G V I C P+ +PKP
Sbjct: 379 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKGQEVVIECKPQGSPKPT 438
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E + V P
Sbjct: 439 ISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCQGENVFGSAEIIASISVKE-P 497
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E+
Sbjct: 498 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFQKEGGHFESIRAQAS 557
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ ++AT+ W
Sbjct: 558 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITDSTATLSW 617
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 618 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVEYEF 672
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 673 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 732
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 733 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 791
Query: 480 VTI 482
V I
Sbjct: 792 VVI 794
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 109/282 (38%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CEA G P Y W RNG ++ LE RY + D I + +D
Sbjct: 41 DEKKVALNCEARGNPVPNYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 95
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N + S + +F R S EG V + C+P +P+ +
Sbjct: 96 HYQCLAANTFGSVLSREAILQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 154
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 155 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 214
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 215 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSRL 273
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 274 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 307
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 150 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 205
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 206 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 265
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 266 YIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 323
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + L I + G+L I N
Sbjct: 324 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPL-------LLQSRIEMVNGVLMIHNV 374
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 375 NQSDAGMYQCLAENKYGAIYASAELKILASAP 406
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F V A N GYG PSS T P QAP+ + + LS+ WEP+
Sbjct: 872 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPNNLRWEQ-QGSQLSLGWEPVRPLANE 929
Query: 417 APNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G G
Sbjct: 930 SEVMGYKVFYRQEGHSNSQVIETQKPQ-----AVVPLPDAGVYI---IEVRAYSEGGDGT 981
Query: 476 ESEVVTI 482
S + +
Sbjct: 982 ASSQIRV 988
>gi|348543227|ref|XP_003459085.1| PREDICTED: contactin-2-like [Oreochromis niloticus]
Length = 1039
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 240/492 (48%), Gaps = 42/492 (8%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAM 63
+DL W+C A G P + W RNG+ PL QDR ++ N + +R +N D M
Sbjct: 340 SDLQWSCVAAGKPRPSVRWLRNGQ-------PLSTQDR--VEVNGVHLRIINLALEDSGM 390
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ T YS+A+LRV P F+ P+ A GG V I C P AAPKP W
Sbjct: 391 YQCVAENKHGTIYSTAELRVQVQAPDFRLNPVRKLIPAARGGQVMIDCRPRAAPKPSLFW 450
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+ ++ + R + +G L I +SR D G Y+C A N G S G L V +
Sbjct: 451 SRGTELLTNSSRITVTPDGILWIYNISRADEGKYTCFAENYLGKANSTGHLSV-RDATKI 509
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--- 240
P I N+ L+C A + +D+ + W+ NGV +DL P ++G
Sbjct: 510 TLAPSNADINQGENVTLQCHASHDAAMDLTFTWSLNGVL---LDLENSAGPYHRVEGKEN 566
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I A + AG Y C ++ V S ++V GPPG PGG+ V V +TS ++W
Sbjct: 567 TGDLLIVRAQLSQAGIYVCTAQTVVDSASASARLVVRGPPGPPGGLLVKNVAETSVELRW 626
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G N PI Y I+ R+ +S W + + E G E++ L+PW+ YEF
Sbjct: 627 SCGYDNHSPIGKYVIMGRSPLSSEWRKMRTDPVNIE-----GNAESARVIGLIPWTDYEF 681
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+VIA N LG GEPS PS T P APS + GGGG +L ++W P+ RE QN
Sbjct: 682 RVIASNILGSGEPSMPSHIIRTLQAAPTVAPSGLAGGGGDRDELIVTWTPMAREYQNGDG 741
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---------YTEYEVKVQAIND 470
Y + +RKK + + + V R+ S Y YT +EVK++A N
Sbjct: 742 FGYILAFRKKGTSSWTE----------VRVPRVESSRYVYYNSSLAAYTPFEVKIKAYNH 791
Query: 471 VGPGPESEVVTI 482
G GP S+V +
Sbjct: 792 KGEGPFSQVAVV 803
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQL--- 72
P ++Y WF N E N +D R+F+ + E D A Y C +
Sbjct: 156 PALSYRWFLN-EFPN---FIRKDDGRWFVSQVTGNLYLAKAEPNDTANYFCFTTINMEVS 211
Query: 73 -KTRYSSA-QLRVL------TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S A QL V+ P+ K R L ++TYA G + C P PK W+
Sbjct: 212 TKSTFSKANQLTVVPDANPRKSAPTIKVRFL-ADTYALAGHTAQLECFAYGNPVPKVRWR 270
Query: 125 K-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K DG + G E L + +S DD GIY C A N G D +GR+ V P +
Sbjct: 271 KVDGLMPSKAG--PTVEGPTLTLPELSFDDEGIYECEAYNSEGRDTYQGRINVQAQPEWL 328
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
Q+ + +LQ C A + V W NG + D + ++G L
Sbjct: 329 -QVMTDSEVEISSDLQWSCVAAGKPRPSVR--WLRNGQPLSTQD-------RVEVNGVHL 378
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVE 276
I N + D+G Y+CV ++ G I + + V+
Sbjct: 379 RIINLALEDSGMYQCVAENKHGTIYSTAELRVQ 411
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 186/506 (36%), Gaps = 73/506 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C P + W R ELL + + R + + + Y D Y C A+N
Sbjct: 438 CRPRAAPKPSLFWSRGTELLTNSS-------RITVTPDGILWIYNISRADEGKYTCFAEN 490
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVW 123
L S+ L V +TL PS +G NVT+ C+ +AA F W
Sbjct: 491 YLGKANSTGHLSVRDATKITLAPS--------NADINQGENVTLQCHASHDAAMDLTFTW 542
Query: 124 KKDG------NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+G N G R + EN G+LLI +GIY CTA V + RL+V
Sbjct: 543 SLNGVLLDLENSAGPYHRVEGKENTGDLLIVRAQLSQAGIYVCTAQTVVDSASASARLVV 602
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P L K L+ C + I + + + + ++ T +
Sbjct: 603 RGPPGPPGGLLVKNVAETSVELRWSCGYDNHSPIGKYVIMGRSPL---SSEWRKMRTDPV 659
Query: 237 NIDG--------GLLEITNASFADAGEYECVVKSTVGK---------ISTKTTVIVEGPP 279
NI+G GL+ T+ E+ + + +G I T P
Sbjct: 660 NIEGNAESARVIGLIPWTDY------EFRVIASNILGSGEPSMPSHIIRTLQAAPTVAPS 713
Query: 280 GLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 336
GL GG + + WT A NG Y + R S+W V V
Sbjct: 714 GLAGGGG----DRDELIVTWTPMAREYQNGDGFG-YILAFRKKGTSSWTEV-------RV 761
Query: 337 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 396
R + + L ++ +E K+ A N G G P S ++ ++P PS I
Sbjct: 762 PRVESSRYVYYNSSLAAYTPFEVKIKAYNHKGEG-PFSQVAVVHSAEEEPTVGPSSINAT 820
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
++ +SWEP+ + N Y+I + ++++ E ++ ++ G A R+
Sbjct: 821 ALSAFEIQVSWEPVQQLSANGILRGYEIRYWRQHEREAAADRVRTAGLEPTA--RVSGLR 878
Query: 457 YYTEYEVKVQAINDVGPGPESEVVTI 482
T Y V V A N G GP S T+
Sbjct: 879 PSTRYHVAVLAYNSAGTGPPSPRTTV 904
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 123/320 (38%), Gaps = 31/320 (9%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T +C+A P Y W L+N +PL + DRY + L I +P RD
Sbjct: 49 EGKVTLSCQARANPAAAYRW-----LVNGTAVPL-NLDRYTLVAGTLVISSPDPIRDTGS 102
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA------- 116
YQC A N+ T S A F +T EG + + C P
Sbjct: 103 YQCLAINRCGTIISRAANLKFGYLHDFPPDGRSPQTI-NEGQGMFLACQPPPHYPALSYR 161
Query: 117 ----PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC-TATNVHGMDE-- 169
P F+ K DG S GNL ++ +D+ Y C T N+ +
Sbjct: 162 WFLNEFPNFIRKDDGRWFVSQ------VTGNLYLAKAEPNDTANYFCFTTINMEVSTKST 215
Query: 170 -SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
SK + + + + P I + + + HT +L AY VR +D
Sbjct: 216 FSKANQLTVVPDANPRKSAPTIKVRFLAD-TYALAGHTAQLECFAYGNPVPKVRWRKVDG 274
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
++G L + SF D G YEC ++ G+ + + + V+ P +
Sbjct: 275 LMPSKAGPTVEGPTLTLPELSFDDEGIYECEAYNSEGRDTYQGRINVQAQPEWLQVMTDS 334
Query: 289 EVHKTSATIQWTDGATNGRP 308
EV + S+ +QW+ A G+P
Sbjct: 335 EV-EISSDLQWSCVAA-GKP 352
>gi|117938277|ref|NP_032805.2| contactin-3 precursor [Mus musculus]
gi|408360027|sp|Q07409.2|CNTN3_MOUSE RecName: Full=Contactin-3; AltName: Full=Brain-derived
immunoglobulin superfamily protein 1; Short=BIG-1;
AltName: Full=Plasmacytoma-associated neuronal
glycoprotein; Flags: Precursor
gi|146327723|gb|AAI41427.1| Contactin 3 [synthetic construct]
gi|148666969|gb|EDK99385.1| contactin 3 [Mus musculus]
Length = 1028
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 243/496 (48%), Gaps = 20/496 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L E +R I++ LTI LN D M+QC
Sbjct: 335 LYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENGALTITNLN-VTDSGMFQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+L+V+ P F + P++ G V + C P A+P+ WKK
Sbjct: 387 IAENKHGLIYSSAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R +G L I V++ D+G Y+CTA N G L+V P+
Sbjct: 447 DMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTE-PTRIILA 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + +A ++ L C + LLD+ + W NG D + E + G L+ I
Sbjct: 506 PSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDLM-I 564
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + WT+G +
Sbjct: 565 RNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDS 624
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+ Y + ART ++ W +V + + +D G+ + L PW YEF+++A N
Sbjct: 625 HSPVISYAVQARTPFSVGWQSV--RTVPEVID---GKTHTATVVELNPWVEYEFRIVASN 679
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y +
Sbjct: 680 KIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVA 739
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW-- 483
+R T + + N V R S ++ YEVKV N+ G GP S V T++
Sbjct: 740 FRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSA 798
Query: 484 -HDPLVIISYVCQGDL 498
+P V S++ L
Sbjct: 799 EEEPTVAPSHISAHSL 814
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKF-NGMLEIQNFQQEDTGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P Y+ QL + IA +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWLQLLRDVEIAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G D LE I I+ G L ITN + D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSL-----DHRYKLNGGNLIV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK R + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTR-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+V+ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R M
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPQI------NWRRSDGMPFP 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
N+++ N G+LEI N D G YEC+ +++ GK
Sbjct: 271 NKIKLRKFN---GMLEIQNFQQEDTGSYECIAENSRGK 305
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 182/490 (37%), Gaps = 67/490 (13%)
Query: 22 SWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80
S+++ G+++ + +Q R F+ D L I + + D Y C A+NQ +
Sbjct: 441 SFWKKGDMM------VREQARVSFLNDGGLKIMNVT-KADAGTYTCTAENQFGKANGTTH 493
Query: 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKI 138
L V+T P + GE +V + C + P F W +G +
Sbjct: 494 L-VVTEPTRIILAPSNMDVAVGE--SVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSH 550
Query: 139 FE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 192
FE +G+L+I + SG Y C S LIV P E + K+
Sbjct: 551 FEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDE 608
Query: 193 AAHRNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
QL + T+ V + +G + + P + IDG T
Sbjct: 609 ITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSVRTV--PEV-IDGKTHTATVVEL 665
Query: 251 ADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
EYE V + +G K+ T+ P + GG ++ I W
Sbjct: 666 NPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGG----SRSELVITW 721
Query: 300 -------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+G G + ++ + T W + V + RY R E+ +V
Sbjct: 722 DPVPEELQNGGGFGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IV 769
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S YE KV N G G P SP + ++P APS I ++ +SW +P
Sbjct: 770 PFSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPW 828
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAIND 470
+ N + Y++ + E S +K GN AV+R + S YYT V+A N
Sbjct: 829 KLSNGHLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYT----AVRAYNS 884
Query: 471 VGPGPESEVV 480
G GP S V
Sbjct: 885 AGAGPFSATV 894
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE 140
+L P F K P S E +T+ C P P + W+ +G +I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVDSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWVFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>gi|114639974|ref|XP_001148002.1| PREDICTED: contactin-5 isoform 2 [Pan troglodytes]
gi|332837597|ref|XP_001147868.2| PREDICTED: contactin-5 isoform 1 [Pan troglodytes]
Length = 1100
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDREVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ ++SAT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESSAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVRGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N L + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKAR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|297690021|ref|XP_002822428.1| PREDICTED: contactin-5 isoform 1 [Pongo abelii]
Length = 1100
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDREVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 110/282 (39%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G PD +Y W RNG ++ LE RY + D I + +D
Sbjct: 115 DEKKVALKCEVRGNPDPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 169
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N L + S +F R S EG V + C+P +P+ +
Sbjct: 170 HYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 228
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 229 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 288
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 289 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKARL 347
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 348 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDPGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|426244438|ref|XP_004016029.1| PREDICTED: contactin-5 [Ovis aries]
Length = 1025
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 232/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 327 LDSGSHLRWECKATGKPRPTYRWLKNG-------VPLLLQSRVEMVNGVLMIHNVN-QSD 378
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ T Y+SA+L++L P+F L + V I C P+ +PKP
Sbjct: 379 AGMYQCLAENKYGTIYASAELKILASAPTFALNQLRKTIIIPKDQEVIIECKPQGSPKPT 438
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E + V P
Sbjct: 439 ISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEITATVSVKE-P 497
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P K + ++ L C A + LDV + WT G I + E+
Sbjct: 498 TRIELTPKKTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPIDFEKEGGHFESIRAQAS 557
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 558 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSW 617
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 618 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPETITGDMESAMAVDLNPWVEYEF 672
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 673 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 732
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 733 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 791
Query: 480 VTI 482
V I
Sbjct: 792 VVI 794
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 107/278 (38%), Gaps = 29/278 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CEA G P Y W RNG ++ LE RY + D I + +D
Sbjct: 41 DEKKVALNCEARGNPVPNYRWLRNGTEID-----LESDYRYSLIDGAFIISNPSEAKDSG 95
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N T S + +F R S EG V + C+P +P+ +
Sbjct: 96 HYQCLAANTFGTILSREVILQFAYLGNFSGR-TRSAVSVREGQGVVLLCSPPPHSPEIIY 154
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 155 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 214
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 215 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSRL 273
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ + +LEI N DAG YEC +++ GK
Sbjct: 274 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGK 303
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 106/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 150 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 205
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 206 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 265
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 266 YIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECRAENSRGKNTFRGQLQVYTYPHWVEKL-N 323
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + +L+ C A + Y W NGV + L + + G+L I N
Sbjct: 324 DTQLDSGSHLRWECKATGKP--RPTYRWLKNGVPL-------LLQSRVEMVNGVLMIHNV 374
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 375 NQSDAGMYQCLAENKYGTIYASAELKILASAP 406
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 184/497 (37%), Gaps = 59/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ G P T SW + + + E++ + D ++R LN + D Y CR +
Sbjct: 429 CKPQGSPKPTISWKKGDKAVR------ENKRIAILPDG--SLRILNASKSDEGKYVCRGE 480
Query: 70 NQLKTRYSSAQLRVLTLKPS-FKKRPLESETYAGEGGNVTIFCNPEAAPKPK----FVWK 124
N + +A + V +P+ + P ++E GE +I N +A P F W
Sbjct: 481 NVFGSAEITATVSVK--EPTRIELTPKKTELTVGE----SIVLNCKAIHDPSLDVTFYWT 534
Query: 125 KDGNIIG---SGGR----RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
G I GG R + +L+I + +G Y C + L+V
Sbjct: 535 LKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVR 594
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL--NELETPN 235
P PP I I + + + + I ++N L ++T
Sbjct: 595 GPPG-----PPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTVKTVP 649
Query: 236 INIDGGLLEITNASFADAGEYECVVKST----VGKISTKTTVIVEG---PPGLPGGVQVV 288
I G + EYE V +T G ST + +I P P V
Sbjct: 650 ETITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGR 709
Query: 289 EVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
+ I W ++ NG Y + R N W + V E ++ R E+
Sbjct: 710 SGRRHELVIAWEPVSEEFQNGEGF-GYIVAFRPNGTRGW--KEKMVTSSEASKFIYRDES 766
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P + +E KV N G G P S + +P AP+ + + ++ +
Sbjct: 767 -----VPPLTPFEVKVGVYNNKGDG-PFSQIVVICSAEGEPTAAPTDVKATSVSVSEILV 820
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEFYYTEYEVK 464
+W+ + +E P ++I +RK + E +ET+K GN I + + T Y
Sbjct: 821 AWKHI-KESLGRPQ-GFEIGYRKDMEQEDAAETVKTRGNESSIILTGLEGN---TLYHFT 875
Query: 465 VQAINDVGPGPESEVVT 481
V+A N G GP S V+
Sbjct: 876 VRAYNGAGYGPPSSEVS 892
>gi|7657359|ref|NP_055176.1| contactin-5 isoform 1 precursor [Homo sapiens]
gi|343168755|ref|NP_001230199.1| contactin-5 isoform 1 precursor [Homo sapiens]
gi|55976223|sp|O94779.2|CNTN5_HUMAN RecName: Full=Contactin-5; AltName: Full=Neural recognition
molecule NB-2; Short=hNB-2; Flags: Precursor
gi|5672487|dbj|BAA36579.2| hNB-2 [Homo sapiens]
gi|119587396|gb|EAW66992.1| contactin 5, isoform CRA_a [Homo sapiens]
Length = 1100
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N + + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTVGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKAR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|120659964|gb|AAI30620.1| CNTN5 protein [Homo sapiens]
Length = 1100
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N + + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTVGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKAR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|219518168|gb|AAI44187.1| Contactin 5 [Homo sapiens]
Length = 1100
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 102/271 (37%), Gaps = 29/271 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N + + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTVGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKAR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYEC 258
L + + +LEI N DAG YEC
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYEC 369
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 104/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSREKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|332207987|ref|XP_003253076.1| PREDICTED: contactin-5 isoform 1 [Nomascus leucogenys]
gi|332207989|ref|XP_003253077.1| PREDICTED: contactin-5 isoform 2 [Nomascus leucogenys]
Length = 1100
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDREVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPIPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N L + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKVECFALGNPVPTITWMKV-NGYIPSKAR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKVECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAP R G ++ S+SWEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPGNLRWEQQGSQV---SLSWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|351695049|gb|EHA97967.1| Contactin-3 [Heterocephalus glaber]
Length = 1021
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 249/497 (50%), Gaps = 20/497 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
M + + W +A G P +Y W +NGE L E +R I++ LTI LN D
Sbjct: 322 MAVEDSIYWEFQASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTD 373
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
M+QC A+N+ YSSA+L+V+ P F K P+++ G V + C P A+P+
Sbjct: 374 SGMFQCIAENKHGLIYSSAELKVVASAPDFSKNPMKNLVQVQVGSLVNLDCKPRASPRAL 433
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK ++ R ++G L I+ V++ DSG Y+CTA N G + L+V+ P
Sbjct: 434 SSWKKGNTVVQEHERISFLKDGGLKIANVTKADSGTYTCTAENQFG-KANGTTLLVVTEP 492
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ P + ++ ++ L C + LLD+ + W NG D + E +
Sbjct: 493 TRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGGSSS 552
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L+ I N +G+Y C+V++ V +S+ +IV G PG P V++ E+ T+A + W
Sbjct: 553 GDLM-IRNIQLKHSGKYVCMVQTRVDSVSSAAELIVRGSPGPPENVKIDEITDTTAQLSW 611
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+G N P+T Y I ART ++ W V+ + + +D G+ + L PW YEF
Sbjct: 612 KEGTDNHSPVTSYAIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEF 666
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN
Sbjct: 667 RVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEG 726
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R T + +T+ + V R S ++ YEVKV N+ G GP S V
Sbjct: 727 FGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIMPFSPYEVKVGVYNNKGEGPFSPV 785
Query: 480 VTIW---HDPLVIISYV 493
T++ +P V S V
Sbjct: 786 TTVFSAEEEPTVAPSQV 802
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 232 AAKGATVKLECFALGNPVPQINWRRSDGMPFPAKIKLRKF-NGVLEIPAFQQEDAGSYEC 290
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ Q + +A ++ A + +Y W N
Sbjct: 291 IAENSRGKNVARGRLTYYAKP-HWVQFIKDMEMAVEDSIYWEFQASGKP--KPSYRWLKN 347
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G I S + V+
Sbjct: 348 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 400
Query: 278 P 278
P
Sbjct: 401 P 401
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 181/495 (36%), Gaps = 56/495 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + ++ E + F++D L I + + D Y C A+N
Sbjct: 424 CKPRASPRALSSWKKGNTVVQ------EHERISFLKDGGLKIANVT-KADSGTYTCTAEN 476
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q + + L V+T P + GE +V + C + P F W +G
Sbjct: 477 QFG-KANGTTLLVVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGA 533
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 534 LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTRVDSVSSAAELIVRGSPGP 593
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDG 240
E + KI QL T+ V I +G + + P + IDG
Sbjct: 594 PENV--KIDEITDTTAQLSWKEGTDNHSPVTSYAIQARTPFSVGWQTVTTV--PEV-IDG 648
Query: 241 GLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVE 289
T EYE V + +G K+ T+ V P + GG
Sbjct: 649 KTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG--- 705
Query: 290 VHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 706 -SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES- 760
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
++P+S YE KV N G G P SP + ++P APS++ ++ ++
Sbjct: 761 ----IMPFSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSAHSVSSSEIEVA 815
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKV 465
W +P + N + Y++ + E S +K G+ A +R + S EY V
Sbjct: 816 WNTIPWKLSNGRLLGYEVQYWNNGAEEESSSKVKVAGHETSARLRGLKSNL---EYYTAV 872
Query: 466 QAINDVGPGPESEVV 480
+A N G GP S V
Sbjct: 873 RAYNSAGAGPFSATV 887
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 100/254 (39%), Gaps = 29/254 (11%)
Query: 30 LNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMYQCRAKNQLKTRYS-SAQLRVLTL 86
LN + + + RY + L + NP R D YQC A N T S A+L+ L
Sbjct: 57 LNGSNIDMSMEHRYKLNGGNLVV--FNPNRNWDTGSYQCFATNSFGTVVSREAKLQFAYL 114
Query: 87 KPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENG 142
+ +FK + + S EG V + C P +++ + + + RR + E G
Sbjct: 115 E-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETG 172
Query: 143 NLLISPVSRDDSGIYSCT----ATNVHGMDESKGRLIVLHG------PSYYEQLPPKITI 192
+L I+ V D G Y+C TN + ++ G P Q P +
Sbjct: 173 HLYIAKVEPSDVGNYTCVVMSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPA 232
Query: 193 AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 252
A ++L C A + + + + + L + G+LEI D
Sbjct: 233 AKGATVKLECFALGNPVPQINWRRSDGMPFPAKIKLRKF--------NGVLEIPAFQQED 284
Query: 253 AGEYECVVKSTVGK 266
AG YEC+ +++ GK
Sbjct: 285 AGSYECIAENSRGK 298
>gi|1095168|prf||2107324A neural adhesion molecule F3
Length = 1021
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 250/485 (51%), Gaps = 26/485 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N T Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENAYGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ + P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITN-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELE-TPNINI 238
+ P I N ++C+A + LD+ ++W+ NG I N ++ + N +
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFML 564
Query: 239 DG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
D G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS +
Sbjct: 565 DANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVAL 624
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W+ G+ N PI+ Y I +T + W + E G E++ L+PW Y
Sbjct: 625 TWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMESAKAVDLIPWMEY 679
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
EF+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE
Sbjct: 680 EFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYG 739
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
N Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 NNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798
Query: 478 EVVTI 482
+ I
Sbjct: 799 LIAVI 803
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLDGKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEDRPEVKVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D+ + R+ V P +
Sbjct: 282 MPTTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++ G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENAYGTI 400
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 187/501 (37%), Gaps = 69/501 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
N S+ L V+T P+ ++ GE N T+ C P FVW +G
Sbjct: 488 NNRGKANSTGTL-VITNPTRIILAPINADITVGE--NATMQCAASFDPSLDLTFVWSFNG 544
Query: 128 NIIGSGG--------RRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+I R + + NG LLI +G Y+CTA + + L+V
Sbjct: 545 YVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P L +I ++ L S ++ ++ +T I + D + +T I
Sbjct: 605 PPGPPGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPII 661
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
+G + EYE V T + G P +P ++ + +
Sbjct: 662 EGNMESAKAVDLIPWMEYEFRV--------VATNTLGTGEPSIPS--NRIKTDGAAPNVA 711
Query: 299 WTD---GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRY 339
+D G R +T HY I+A ++ W V+ V + RY
Sbjct: 712 PSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRY 769
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 VHKDET-----MTPSTAFQVKVKAFNNKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLS 823
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
++S+ W+ + + + I Y K+ T +EY R+ + T
Sbjct: 824 SSEISVHWKHVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDT 877
Query: 460 EYEVKVQAINDVGPGPESEVV 480
+Y ++V A N G GP S+V+
Sbjct: 878 QYFIEVGACNSAGCGPSSDVI 898
>gi|354465594|ref|XP_003495264.1| PREDICTED: contactin-3, partial [Cricetulus griseus]
Length = 712
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 243/496 (48%), Gaps = 20/496 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L E +R I++ LTI LN D M+QC
Sbjct: 19 LYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENGALTISNLN-VTDSGMFQC 70
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+L+V+ P F + P++ G V + C P A+P+ WKK
Sbjct: 71 IAENKHGLIYSSAELKVVASAPDFSRNPMKKLVQVQVGSLVILDCKPRASPRALSFWKKG 130
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R +G L I V++ D+G Y+CTA N G L+V P+
Sbjct: 131 DTMVREQSRISFLNDGGLKILNVTKADAGTYTCTAENQFGKANGTTHLVVTE-PTRIILA 189
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + +A ++ L C + LLD+ + W NG D + E + G L+ I
Sbjct: 190 PSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDLM-I 248
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + WT+G +
Sbjct: 249 RNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDS 308
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+ Y + ART ++ W V+ + + +D T R +E L PW YEF+V+A N
Sbjct: 309 HSPVISYAVQARTPFSVGWQTVT--TVPEVIDGKT-RTATVVE--LNPWVEYEFRVVASN 363
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y +
Sbjct: 364 KIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVA 423
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW-- 483
+R T + + N V R S ++ YEVKV N+ G GP S V T++
Sbjct: 424 FRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSA 482
Query: 484 -HDPLVIISYVCQGDL 498
+P V S + L
Sbjct: 483 EEEPTVAPSRISAQSL 498
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 174/478 (36%), Gaps = 60/478 (12%)
Query: 33 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 92
+T+ E F+ D L I + + D Y C A+NQ + L V+T
Sbjct: 131 DTMVREQSRISFLNDGGLKILNVT-KADAGTYTCTAENQFGKANGTTHL-VVTEPTRIIL 188
Query: 93 RPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE------NGNL 144
P + GE +V + C + P F W +G + FE +G+L
Sbjct: 189 APSNMDVAVGE--SVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDL 246
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
+I + SG Y C S LIV P E + K+ QL +
Sbjct: 247 MIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDEITDTTAQLSWTE 304
Query: 205 HTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVV 260
T+ V + +G + + P + IDG T EYE V
Sbjct: 305 GTDSHSPVISYAVQARTPFSVGWQTVTTV--PEV-IDGKTRTATVVELNPWVEYEFRVVA 361
Query: 261 KSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGAT 304
+ +G K+ T+ P + GG ++ I W +G
Sbjct: 362 SNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGG----SRSELVITWDPVPEELQNGGG 417
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
G + ++ + T W + V + RY R E+ +VP+S YE KV
Sbjct: 418 FGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IVPFSPYEVKVGVY 465
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N G G P SP + ++P APSRI ++ +SW +P + N + Y++
Sbjct: 466 NNKGEG-PFSPVTTVFSAEEEPTVAPSRISAQSLSSSEIEVSWNTIPWKLSNGHLLGYEV 524
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
+ E S +K GN V++ + S YYT V+A N G GP S V
Sbjct: 525 RYWNNGGEEESSSKMKVAGNQTSTVLQGLKSNLAYYT----AVRAYNSAGAGPFSATV 578
>gi|73996768|ref|XP_851830.1| PREDICTED: contactin-1 isoform 3 [Canis lupus familiaris]
Length = 1018
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 245/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N T Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G + G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 680 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 192/497 (38%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + R ++ V+T P+ ++ GE + + + A F+W +G +
Sbjct: 488 NN-RGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 664 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 713
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 714 GGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 771
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 772 ET-----MRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEI 825
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 826 SVHWEHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 879
Query: 464 KVQAINDVGPGPESEVV 480
+V+A N G GP S+++
Sbjct: 880 EVRACNSAGCGPPSDMI 896
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENNRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGTI 400
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|16923964|ref|NP_476459.1| contactin-1 precursor [Rattus norvegicus]
gi|17432928|sp|Q63198.2|CNTN1_RAT RecName: Full=Contactin-1; AltName: Full=Neural cell surface
protein F3; Flags: Precursor
gi|1498194|dbj|BAA07504.1| F3 [Rattus norvegicus]
gi|149017608|gb|EDL76612.1| contactin 1 [Rattus norvegicus]
Length = 1021
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 250/485 (51%), Gaps = 26/485 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N T Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENAYGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ + P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITN-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELE-TPNINI 238
+ P I N ++C+A + LD+ ++W+ NG I N ++ + N +
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFML 564
Query: 239 DG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
D G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS +
Sbjct: 565 DANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVAL 624
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W+ G+ N PI+ Y I +T + W + E G E++ L+PW Y
Sbjct: 625 TWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMESAKAVDLIPWMEY 679
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
EF+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE
Sbjct: 680 EFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYG 739
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
N Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 NNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798
Query: 478 EVVTI 482
+ I
Sbjct: 799 LIAVI 803
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEDRPEVKVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D+ + R+ V P +
Sbjct: 282 MPTTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++ G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENAYGTI 400
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 187/501 (37%), Gaps = 69/501 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
N S+ L V+T P+ ++ GE N T+ C P FVW +G
Sbjct: 488 NNRGKANSTGTL-VITNPTRIILAPINADITVGE--NATMQCAASFDPSLDLTFVWSFNG 544
Query: 128 NIIGSGG--------RRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+I R + + NG LLI +G Y+CTA + + L+V
Sbjct: 545 YVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P L +I ++ L S ++ ++ +T I + D + +T I
Sbjct: 605 PPGPPGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPII 661
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
+G + EYE V T + G P +P ++ + +
Sbjct: 662 EGNMESAKAVDLIPWMEYEFRV--------VATNTLGTGEPSIPS--NRIKTDGAAPNVA 711
Query: 299 WTD---GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRY 339
+D G R +T HY I+A ++ W V+ V + RY
Sbjct: 712 PSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRY 769
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 VHKDET-----MTPSTAFQVKVKAFNNKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLS 823
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
++S+ W+ + + + I Y K+ T +EY R+ + T
Sbjct: 824 SSEISVHWKHVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDT 877
Query: 460 EYEVKVQAINDVGPGPESEVV 480
+Y ++V A N G GP S+V+
Sbjct: 878 QYFIEVGACNSAGCGPSSDVI 898
>gi|440901336|gb|ELR52306.1| Contactin-2, partial [Bos grunniens mutus]
Length = 1018
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P W RNGE PL Q R + L L+ E D
Sbjct: 317 DIGSDLHWACAAAGKPRPAVRWLRNGE-------PLTSQARVEVMAGDLRFSKLSLE-DS 368
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG V I C P AAPK
Sbjct: 369 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEVVIPCQPRAAPKAVV 428
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I VSR D G Y+C A N G S G L V +
Sbjct: 429 LWSKGTEILVNSSRVTVTPDGTLIIRNVSRSDEGKYTCFAENFMGKANSTGTLSVRDA-T 487
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ ++WT + I + + ++
Sbjct: 488 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDFDKPGGHYQRASVKETV 547
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C ++ V S + TV+V GPPG PGGV V ++ TS + W+
Sbjct: 548 GDLTILNAQLRHGGKYTCTAQTVVDSASKEATVLVRGPPGAPGGVVVRDISDTSVQLSWS 607
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + E G E + L PW YEF+
Sbjct: 608 RGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIE-----GNAETAQVLGLTPWMDYEFR 662
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L+++W P+ RE Q+
Sbjct: 663 VLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMSREYQHGGGF 722
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES V
Sbjct: 723 GYLVSFRRQGGTSWQTARVPG-ADAQYFVYSNDSIRPYTPFEVKIRSYNRRGDGPESLVA 781
Query: 481 TIW 483
++
Sbjct: 782 VVY 784
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 116/291 (39%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG + LE R + L I + +D +YQC
Sbjct: 35 VTLACRARASPPATYRWKMNGTEMK-----LEPGSRQQLVGGNLVIMNPSKAQDAGVYQC 89
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 90 LASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 147
Query: 124 -KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 148 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 205
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + P + + + L C A + RI +
Sbjct: 206 NLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 254
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + F D G YEC ++T G+ + + +IV+ P
Sbjct: 255 DGSLSPQWATAEPTLQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQAQP 305
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 108/273 (39%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 140 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 193
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 194 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 252
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I V +D G Y C A N G D +GR+IV P +
Sbjct: 253 K---VDGSLSPQWATAEPTLQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQAQPEWLR 309
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ + +L C+A + A W NG + + + + G L
Sbjct: 310 VISDREADIGS-DLHWACAAAGKP--RPAVRWLRNGEPLTSQA-------RVEVMAGDLR 359
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 360 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 392
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 86/215 (40%), Gaps = 39/215 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SSA T P F+++PL E T VT+ C A+P + WK +G +
Sbjct: 3 WSSAWGSPATFGPVFEEQPLGLLFPEESTEE----KVTLACRARASPPATYRWKMNGTEM 58
Query: 131 G-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQ 185
G R+ GNL+I +P D+G+Y C A+N G E+ R L S E+
Sbjct: 59 KLEPGSRQQLVGGNLVIMNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEER 118
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG---- 240
P K L AH L +Y W N E PN I DG
Sbjct: 119 DPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFV 163
Query: 241 ----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 164 SQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 197
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 109/504 (21%), Positives = 187/504 (37%), Gaps = 80/504 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P W + E+L NS + + D L IR ++ D Y C A+
Sbjct: 418 CQPRAAPKAVVLWSKGTEILVNSSRVTV-------TPDGTLIIRNVS-RSDEGKYTCFAE 469
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
N + S+ L V +TL PS L G N+T+ C+ P FV
Sbjct: 470 NFMGKANSTGTLSVRDATKITLAPSSADINL--------GDNLTLQCHASHDPTMDLTFV 521
Query: 123 WKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D I G R + E G+L I G Y+CTA V + ++
Sbjct: 522 WTLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDSASKEATVL 581
Query: 176 VLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
V P P + + + ++QL S + +A +T + + ++ T
Sbjct: 582 VRGPPG----APGGVVVRDISDTSVQLSWSRGFDNHSPIAK-YTLQARTLPSGKWKQVRT 636
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG-VQVVEVHK 292
NI+G +YE V ++ ++ G P P +Q E
Sbjct: 637 NPTNIEGNAETAQVLGLTPWMDYEFRVLAS--------NILGTGEPSGPSSKIQTKEAAP 688
Query: 293 T--------------SATIQWTDGATNGRPITH-----YKIIARTNWNSTWFNVSEHVIG 333
+ T+ WT + R H Y + R ++W + V G
Sbjct: 689 SVAPSGLSGGGGAPGELTVTWTPMS---REYQHGGGFGYLVSFRRQGGTSW--QTARVPG 743
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
+ + ++ + P++ +E K+ + N G G S + Y+ ++P AP ++
Sbjct: 744 ADAQYFVYSNDS-----IRPYTPFEVKIRSYNRRGDGPESLVAVVYSA-EEEPRVAPPKV 797
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
++++SWEP+ ++ N + Y+I + K +E ++ G A+V
Sbjct: 798 WAKAVSSSEMNVSWEPV-QQDMNGILLGYEIRYWKAGAKAAAAERVRTAGLDTSALVT-- 854
Query: 454 SEFYYTEYEVKVQAINDVGPGPES 477
T+Y V V+A N G GP S
Sbjct: 855 GLHASTKYHVTVRAYNRAGTGPAS 878
>gi|149714162|ref|XP_001487999.1| PREDICTED: contactin-1 isoform 2 [Equus caballus]
Length = 1008
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 244/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 332 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHKGELRLYD------------VTFENA--- 376
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 377 -GMYQCIAENTHGVIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 435
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 436 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 494
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 495 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 554
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 555 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 614
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 615 SRGSDNHSPISKYSIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 669
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 670 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 729
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 730 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 788
Query: 480 VTI 482
I
Sbjct: 789 AVI 791
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 31 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 89
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 90 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 146
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 147 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 202
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 203 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 240
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 157 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 211
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 212 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 271
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N+ G D+ GR+ V P +
Sbjct: 272 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENIRGKDKHHGRIYVQAFPEW 323
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 324 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHKGE 365
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 366 LRLYDVTFENAGMYQCIAENTHGVI 390
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 186/497 (37%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 426 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 477
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A F+W +G +
Sbjct: 478 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 536
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 537 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 596
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L + A L + + I T I + D + +T I+G +
Sbjct: 597 PGGLRIEDIRATSVALTWSRGSDNHSPISKYSIQTKT---ILSDDWKDAKTDPPIIEGNM 653
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 654 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 703
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 704 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 761
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 762 ET-----MRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPAEVGVKVLSSSEI 815
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 816 SVHWEHVVEKIVESYQIRYWSAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 869
Query: 464 KVQAINDVGPGPESEVV 480
+V+A N G GP S+++
Sbjct: 870 EVRACNSAGCGPPSDMI 886
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 119/324 (36%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 48 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 99
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 100 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 156
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 157 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 216
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 217 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 267
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + V+ P +
Sbjct: 268 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHHGRIYVQAFPEWVEHI 327
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 328 NDTEV-DIGSDLYWPCVAT-GKPI 349
>gi|219520630|gb|AAI44186.1| CNTN5 protein [Homo sapiens]
Length = 1100
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R + +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAVLPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N + + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTVGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKAR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|301612220|ref|XP_002935618.1| PREDICTED: contactin-5-like [Xenopus (Silurana) tropicalis]
Length = 1097
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C+A P Y W +NG LPL Q+R + + +LTI +N + D
Sbjct: 399 LDSGDQLRWECKAEAKPRPIYRWLKNG-------LPLMPQNRIEMVNGMLTIHNVN-QSD 450
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y SA+L+VL P+F+ + +G V + C P A+PKP
Sbjct: 451 AGMYQCLAENIYGIIYGSAELKVLASAPTFELSQKQKTVVITKGKEVVLECKPSASPKPS 510
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K + R + +G+L I S+ D G Y+C N+ G+ E + V P
Sbjct: 511 ISWMKGEKAVRQNKRVAVLPDGSLRILNASKSDEGRYTCRGENIFGLAEIVASVFVTE-P 569
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LLDV++ W NG + + E+
Sbjct: 570 TKIELTPKRTELTVGESIVLSCKAIHDPLLDVSFSWILNGQPVSFEKEDGHFESIRTQAS 629
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + V+V GPPG PG V V E+ +++AT+ W
Sbjct: 630 SADLMIRNILLMHAGRYGCRVQTTADTVSDEAEVLVRGPPGPPGVVIVEEITESTATLSW 689
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ GA N PI Y + AR+ ++ W + + G E+++ L PW YEF
Sbjct: 690 SPGAENHSPILCYNLQARSPFSLGW-----QTVKTVPEIINGEMESAMVVDLNPWVEYEF 744
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P P+ + GG G+ +L I+WEP+ E QN
Sbjct: 745 RVVATNSIGTGDPSVPSRVIRTKEAVPKTPPANVSGGSGRRHELVITWEPVSEEFQNGEG 804
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N+T E + + + R S T +EVKV N+ G GP S++
Sbjct: 805 FGYIVAFR-PNNTRGWKEKMVTSSDASKFIYRDESTPPLTPFEVKVGVYNNKGDGPFSDI 863
Query: 480 VTI 482
V I
Sbjct: 864 VFI 866
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 108/282 (38%), Gaps = 32/282 (11%)
Query: 1 MDN-QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
MD+ + + CEA GVP Y W RNG ++ LE+ RY + D I N +
Sbjct: 110 MDSGEKKVALNCEARGVPTPIYRWLRNGTEID-----LENDYRYSMIDGNFIISSPNEMK 164
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
D YQC A N + S +F R + S EG V + C+ P +P+
Sbjct: 165 DSGQYQCLAANSFGSILSREATLQFAYLGNFSGR-IRSAVSVREGQGVVLMCSPPHHSPE 223
Query: 119 PKFVW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTA----TNVHGMDESK 171
+ W + + + RR I + GNL IS D G Y C TN M
Sbjct: 224 LIYSWVFNEFPSFVAEDSRRFISQQTGNLYISKAQASDVGSYICLVKNPLTNTRVMSPPT 283
Query: 172 GRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIG 224
+ G P P T A +++ C A + ++ W +G
Sbjct: 284 PLTLRNDGVMGEYEPKIEVHFPYTFTAAQGTTVKMECFALGNPVPTIS--WRKVSGFIPS 341
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
L + + +LEI N DAG YEC +++ GK
Sbjct: 342 KARLRKAQ--------AVLEIPNVQLEDAGTYECKAENSRGK 375
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 104/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q D Y C KN L
Sbjct: 222 PELIYSWVFN----EFPSFVAEDSRRFISQQTGNLYISKAQASDVGSYICLVKNPLTNTR 277
Query: 77 SSAQLRVLTLKPSFKKRPLESET--------YAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W+K
Sbjct: 278 VMSPPTPLTLRNDGVMGEYEPKIEVHFPYTFTAAQGTTVKMECFALGNPVPTISWRKVSG 337
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + + L I V +D+G Y C A N G + +G+L V P + E++
Sbjct: 338 FIPSKARLRKAQ-AVLEIPNVQLEDAGTYECKAENSRGKNAFRGQLQVYTQPQWIEKIND 396
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ QLR E Y W NG+ + M N +E N G+L I N
Sbjct: 397 TQLDSGD---QLRWECKAEAKPRPIYRWLKNGLPL--MPQNRIEMVN-----GMLTIHNV 446
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + V+ P
Sbjct: 447 NQSDAGMYQCLAENIYGIIYGSAELKVLASAP 478
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 14/181 (7%)
Query: 88 PSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNL 144
P F + P E+ + + G V + C P P + W ++G I R +GN
Sbjct: 97 PVFVQEP-ENIVFPMDSGEKKVALNCEARGVPTPIYRWLRNGTEIDLENDYRYSMIDGNF 155
Query: 145 LIS-PVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
+IS P DSG Y C A N G S+ L + ++ ++ +++ + + L C
Sbjct: 156 IISSPNEMKDSGQYQCLAANSFGSILSREATLQFAYLGNFSGRIRSAVSVREGQGVVLMC 215
Query: 203 SA--HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
S H+ EL+ Y W N + E I+ G L I+ A +D G Y C+V
Sbjct: 216 SPPHHSPELI---YSWVFNEF---PSFVAEDSRRFISQQTGNLYISKAQASDVGSYICLV 269
Query: 261 K 261
K
Sbjct: 270 K 270
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 312 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371
Y + R N W + V + ++ R E++ P + +E KV N G G
Sbjct: 807 YIVAFRPNNTRGW--KEKMVTSSDASKFIYRDEST-----PPLTPFEVKVGVYNNKGDG- 858
Query: 372 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN-APNIYYKIFWRKKN 430
P S + +P AP+ + G G ++ ++W+P+ K+N ++ Y++ + K
Sbjct: 859 PFSDIVFICSAEGEPTTAPADVKGTGLSASEIVVAWKPM---KENLGKSLGYEVSYWKDM 915
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ E SE +K GN + V + T Y + V+A N G GP S V
Sbjct: 916 EQEEASEKVKTAGNE--SSVILTDLDGNTLYHITVRAYNKAGYGPPSAAV 963
>gi|444516815|gb|ELV11290.1| Contactin-1, partial [Tupaia chinensis]
Length = 886
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 243/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 220 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 264
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 265 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 323
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D G+Y+C A N G S G L++ P
Sbjct: 324 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGVYTCFAENNRGKANSTGTLVIT-DP 382
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 383 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 442
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 443 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 502
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + + G EA+ L+PW YEF
Sbjct: 503 SRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAAKAVDLIPWMEYEF 557
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 558 RVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 617
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ G V + + T ++VKV+A N G GP S +
Sbjct: 618 FGYIVAFKPFDGVEWKKVTVTN-PETGRYVHKDETMSPSTAFQVKVKAFNSKGDGPYSLI 676
Query: 480 VTI 482
I
Sbjct: 677 AVI 679
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 98/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 45 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDKGNYSCFVSSPSITKS 99
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 100 VFSKFIPLIPIPERTTKPYPADIIVQFKDIYTLMGQNVTLECFALGNPVPDIRWRKVLEP 159
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D+ + R+ V P +
Sbjct: 160 MPSTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIKGKDKHQARIYVQAFPEW 211
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 212 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 253
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 254 LRLYDVTFENAGMYQCIAENTHGAI 278
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 189/497 (38%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 314 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGVYTCFAE 365
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A F+W +G +
Sbjct: 366 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 424
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 425 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 484
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 485 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 541
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 542 EAAKAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NRIKTDGAAPNVAPSDV 591
Query: 302 --GATNGRPIT----------HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V E RY +
Sbjct: 592 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGVEWKKVT--VTNPETGRYVHKD 649
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S N+ D P +AP+ +G ++
Sbjct: 650 E-----TMSPSTAFQVKVKAFNSKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLSSSEI 703
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ W+ + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 704 SVHWKHVLEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 757
Query: 464 KVQAINDVGPGPESEVV 480
+V A N G GP S+V+
Sbjct: 758 EVGACNSAGCGPPSDVI 774
>gi|431913510|gb|ELK15185.1| Contactin-6 [Pteropus alecto]
Length = 725
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 237/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P Y+WF+NGELL +R +++ L I LN D +YQ
Sbjct: 30 SLFWECKASGKPSPRYTWFKNGELL-------RPGERIHVENGTLIIATLNAS-DSGVYQ 81
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ + GG+VTI C P A P+ WK+
Sbjct: 82 CAAENEFQMIYANAELRVLASAPDFSKNPIKKTSVVHVGGDVTIDCKPTAFPRAAISWKR 141
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ + R + E+G+L + V+R D+G Y+CTATN G+ + G L+V +
Sbjct: 142 GTSSLRPSRRVYVSEDGSLAMHNVTRSDAGPYTCTATNQFGVAKDTGGLVVKER-TVITV 200
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P + + ++ L C + ++VA++W+ +G I DL + + G G
Sbjct: 201 PPAPMDVTVGESIVLPCQVSHDPSVEVAFVWSFDGHVI---DLKKEVAHFERLGGESIGD 257
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C VK+T+ +S VIV GPPG P V V V T++ + W G
Sbjct: 258 LMIRNIQLNHSGKYLCAVKTTLESLSAAADVIVRGPPGPPEDVSVEHVSSTTSQLSWRPG 317
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
A N PI + + ART ++ W VS + +G+ + L PW YEF+V+
Sbjct: 318 ADNNSPIQLFTVQARTPFSVGWQAVS-----TVPEILSGKTRNATVVGLSPWVEYEFRVV 372
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS S T A P AP+ + GGGG +L I+WE +P E Q+ Y
Sbjct: 373 AGNSIGIGEPSESSEPLRTKASVPVVAPTNVDGGGGGRSELVITWESIPEELQSGGEFGY 432
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ R + + + + V R S + +EV+V N G G S V +
Sbjct: 433 LVLLRPAGSAAWTEQRVPAVESCRF-VYRNESIAPLSPFEVQVGVYNAEGDGALSAVAIV 491
Query: 483 W 483
+
Sbjct: 492 Y 492
>gi|405975991|gb|EKC40516.1| Contactin [Crassostrea gigas]
Length = 1161
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 257/509 (50%), Gaps = 35/509 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +D+TW CE P +Y W++N L+ S T +E I NVL I+ L
Sbjct: 501 VDENSDITWRCEGIASPRASYVWYKNARLITSGTDGIE------IYSNVLKIKNLQKRIH 554
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MY C A N + SSAQL+VL+ KPSF K PL A GN+TI C PEAAP P
Sbjct: 555 DGMYSCEATNIHGSSVSSAQLKVLSFKPSFAKNPLPRTILAANNGNLTIPCMPEAAPVPM 614
Query: 121 FVWKKDGNII------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W K+G + G+ ++ NG L I VS D+G+Y+C A N +G S G +
Sbjct: 615 ISWLKNGGKLSLPITDGNQKGAQLLSNGYLKIVGVSMVDAGLYTCVAANQNGESMSTGNV 674
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHNGVRIG-NMDLNELE 232
V+ G + QL P++ + + + + C + +D+ +W NG I D +
Sbjct: 675 TVVGGVTIVTQLFPEMRVNKNDTVFIECQVSYDIFRVDLVLVWKFNGRIIDFTQDFFYEK 734
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
+ + I G + + + +G YECV ST+ + S T VIV+GPPG+PG V ++ +
Sbjct: 735 STRMGISGLFIHFID--YYHSGVYECVAMSTITQSSISTNVIVQGPPGMPGNVYRIKGSE 792
Query: 293 T--SATIQWTDGATNGRPITHYKIIARTNWNSTW----FNVSEHVIGKEVDRYTGRKEAS 346
T S TI+WT+ +G I Y I ART N W N+S+ + + + +++ +
Sbjct: 793 TTRSVTIKWTEPPDHGSQIQQYNIEARTMDNPKWRPVATNLSDFNVLIPGNLDSDKRQYT 852
Query: 347 IENVLVPWSTYEFKVIAGNEL-GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ LVP+++Y+F+V+A N GE S PS D P + +GGGGG G L+I
Sbjct: 853 VTG-LVPFNSYQFRVVARNRFPQLGEYSKPSEYIQLKPDVPVVSVQNVGGGGGSEGVLTI 911
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEY---------GNVGIAVVRIPSE 455
SW L E++ PNI Y ++WRK T EFQ +TL E GN V + S+
Sbjct: 912 SWRLLAEEERCGPNIGYNVYWRKNGTTEEFQMKTLLETDHMFQKMVSGNSVSYTVNLNSD 971
Query: 456 -FYYTEYEVKVQAINDVGPGPESEVVTIW 483
+Y YEVK+ N G GP S ++
Sbjct: 972 KLFYLPYEVKIGVFNKYGRGPNSTSTVVY 1000
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 114/299 (38%), Gaps = 48/299 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G+P Y W R ++ SE + + + Y I + LT ++ RD +Y C A N
Sbjct: 210 CEATGIPQPRYVWHRT-DVTGSEEV-IGKSEFYTISNGKLTFNRIDERRDAGIYHCEASN 267
Query: 71 QL-KTRYSSAQLRVLTL------KPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFV 122
+ R + +++ +L P + L TY + CNP P +
Sbjct: 268 KFGSVRSAPSKITFGSLAQFPNVAPGVNRVALYQGTY--------LNCNPPTHKPAVSYQ 319
Query: 123 WKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC------------------TAT 162
W K + + F +GNL S V ++D G Y C T T
Sbjct: 320 WMKGTSFLIQALNSYFFLSADGNLYFSEVQQNDEGNYHCIVTLKAFPGDTLATDQPPTET 379
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH--RNLQLRCSAHTEELLDVAYIWTHNG 220
++ + G L+ P ++ P + + + + C A+ L Y W+ +G
Sbjct: 380 SLDIKLDVLGDTAALYPPQIHDDFPAVFPKSPRLGQKITIECLAYGRTPL--RYRWSKSG 437
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
GN+ ++ T N + +L I N F D G Y C V+ S + + P
Sbjct: 438 N--GNLP-SKAYTQNFD---RVLVIPNVQFTDEGTYTCHVQGRTQTESKDFLLTINAKP 490
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 108 TIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIF--ENGNLLISPVS-RDDSGIYSCTA 161
+I C P+P++VW + ++ GS G+ + + NG L + + R D+GIY C A
Sbjct: 207 SIECEATGIPQPRYVWHRT-DVTGSEEVIGKSEFYTISNGKLTFNRIDERRDAGIYHCEA 265
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
+N G S I + + + P + +A ++ L C+ T + V+Y W G
Sbjct: 266 SNKFGSVRSAPSKITFGSLAQFPNVAPGVNRVALYQGTYLNCNPPTHKPA-VSYQWM-KG 323
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
LN ++ DG L + D G Y C+V
Sbjct: 324 TSFLIQALNSYFF--LSADGNLY-FSEVQQNDEGNYHCIV 360
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 196/535 (36%), Gaps = 59/535 (11%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN----PE 58
N +LT C P SW +NG L +LP+ D ++ Q +L+ YL
Sbjct: 597 NNGNLTIPCMPEAAPVPMISWLKNGGKL---SLPITDGNQKGAQ--LLSNGYLKIVGVSM 651
Query: 59 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE---A 115
D +Y C A NQ S+ + V+ + L E + V I C
Sbjct: 652 VDAGLYTCVAANQNGESMSTGNVTVVGGVTIVTQ--LFPEMRVNKNDTVFIECQVSYDIF 709
Query: 116 APKPKFVWKKDGNIIGSGGRRKIFENGN------LLISPVSRDDSGIYSCTATN------ 163
VWK +G II + +E L I + SG+Y C A +
Sbjct: 710 RVDLVLVWKFNGRII-DFTQDFFYEKSTRMGISGLFIHFIDYYHSGVYECVAMSTITQSS 768
Query: 164 ------VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 217
V G G + + G + K T Q++ +D W
Sbjct: 769 ISTNVIVQGPPGMPGNVYRIKGSETTRSVTIKWTEPPDHGSQIQQYNIEARTMDNPK-WR 827
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS--TKTTVIV 275
+ D N L N++ D +T ++ ++ V ++ ++ +K + +
Sbjct: 828 PVATNLS--DFNVLIPGNLDSDKRQYTVTGLVPFNSYQFRVVARNRFPQLGEYSKPSEYI 885
Query: 276 EGPPGLPG-GVQVVEVHKTS---ATIQWTDGATNGR--PITHYKIIARTNWNSTWFNV-- 327
+ P +P VQ V S TI W A R P Y + R N + F +
Sbjct: 886 QLKPDVPVVSVQNVGGGGGSEGVLTISWRLLAEEERCGPNIGYNVYWRKNGTTEEFQMKT 945
Query: 328 ---SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 384
++H+ K V + ++ + + + YE K+ N+ G G P+S S +
Sbjct: 946 LLETDHMFQKMVSGNSVSYTVNLNSDKLFYLPYEVKIGVFNKYGRG-PNSTSTVVYSSEG 1004
Query: 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY--YKIFWRKKNDTEFQSETLKEY 442
P P+ + G L ++W+PLP + + ++I ND +S T Y
Sbjct: 1005 IPLLRPTNVNGWEINSTALWVTWDPLPNTRDAIKGVIQGFEINVEDANDANRKSVTAYHY 1064
Query: 443 GNV-GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIWHDPLVIISYV 493
G + G V+ + T+Y V VQ N G P + + T + PL+ +V
Sbjct: 1065 GYMEGNNVIGLEPN---TDYWVTVQIFNTAGESNPSEKQLLGTCLNPPLLYPEFV 1116
>gi|149714159|ref|XP_001487987.1| PREDICTED: contactin-1 isoform 1 [Equus caballus]
Length = 1019
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 244/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 343 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHKGELRLYD------------VTFENA--- 387
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 388 -GMYQCIAENTHGVIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 446
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 447 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 505
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 506 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 565
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 566 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 625
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 626 SRGSDNHSPISKYSIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 680
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 681 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 740
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 741 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 799
Query: 480 VTI 482
I
Sbjct: 800 AVI 802
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 42 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 100
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 101 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 157
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 158 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 213
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 214 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 251
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 168 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 222
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 223 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 282
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N+ G D+ GR+ V P +
Sbjct: 283 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENIRGKDKHHGRIYVQAFPEW 334
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 335 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHKGE 376
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 377 LRLYDVTFENAGMYQCIAENTHGVI 401
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 186/497 (37%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 437 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 488
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A F+W +G +
Sbjct: 489 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 547
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 548 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 607
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L + A L + + I T I + D + +T I+G +
Sbjct: 608 PGGLRIEDIRATSVALTWSRGSDNHSPISKYSIQTKT---ILSDDWKDAKTDPPIIEGNM 664
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 665 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 714
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 715 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 772
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 773 E-----TMRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPAEVGVKVLSSSEI 826
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 827 SVHWEHVVEKIVESYQIRYWSAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 880
Query: 464 KVQAINDVGPGPESEVV 480
+V+A N G GP S+++
Sbjct: 881 EVRACNSAGCGPPSDMI 897
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 119/324 (36%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 59 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 110
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 111 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 167
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 168 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 227
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 228 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 278
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + V+ P +
Sbjct: 279 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHHGRIYVQAFPEWVEHI 338
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 339 NDTEV-DIGSDLYWPCVAT-GKPI 360
>gi|44890693|gb|AAH66864.1| Cntn1 protein [Mus musculus]
gi|148672348|gb|EDL04295.1| contactin 1 [Mus musculus]
Length = 1020
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 250/485 (51%), Gaps = 26/485 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCIATGKPIPTIRWLKNGYSYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N + Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVVIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ + P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITN-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELE-TPNINI 238
+ P I N ++C+A + LD+ ++W+ NG I N ++ + N +
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFML 564
Query: 239 DG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
D G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS +
Sbjct: 565 DANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVAL 624
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W+ G+ N PI+ Y I +T + W + E G E++ L+PW Y
Sbjct: 625 TWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMESAKAVDLIPWMEY 679
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
EF+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE
Sbjct: 680 EFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYG 739
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
N Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 NNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798
Query: 478 EVVTI 482
V I
Sbjct: 799 LVAVI 803
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+G+Y C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGVYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVKVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCIATGKPIPTIR--WLKNGY---------------SYHKGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++ G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENAYGSI 400
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 186/499 (37%), Gaps = 65/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGG--------RRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I R + + NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 606
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L +I ++ L S ++ ++ +T I + D + +T I+G
Sbjct: 607 GPPGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEG 663
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
+ EYE V T + G P +P ++ + + +
Sbjct: 664 NMESAKAVDLIPWMEYEFRV--------VATNTLGTGEPSIPS--NRIKTDGAAPNVAPS 713
Query: 301 D---GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G R +T HY I+A ++ W V+ V + RY
Sbjct: 714 DVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 771
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 772 KDET-----MTPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 825
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ W+ + + + I Y K+ T +EY R+ + T+Y
Sbjct: 826 EISVHWKHVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDTQY 879
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+V+
Sbjct: 880 FIEVGACNSAGCGPSSDVI 898
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 120/322 (37%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W +N+ + L + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKW-----RMNNGDVDLTN-DRYSMVGGNLVINNPDKQKDAGV 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 112 YYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVKVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D +R +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPD---------IRWRKVL 279
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 280 EPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCIAT-GKPI 359
>gi|359073808|ref|XP_003587094.1| PREDICTED: contactin-2-like [Bos taurus]
Length = 1040
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P W RNGE PL Q R + L L+ E D
Sbjct: 339 DIGSDLHWACAAAGKPRPAVRWLRNGE-------PLTSQARVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG V I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEVVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I VSR D G Y+C A N G S G L V +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNVSRSDEGKYTCFAENFMGKANSTGTLSVRDA-T 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ ++WT + I + + ++
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDFDKPGGHYQRASVKETV 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C ++ V S + TV+V GPPG PGGV V ++ TS + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCTAQTVVDSASKEATVLVRGPPGAPGGVVVRDISDTSVQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L+++W P+ RE Q+
Sbjct: 685 VLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMSREYQHGGGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES V
Sbjct: 745 GYLVSFRRQGGTSWQTARVPG-ADAQYFVYSNDSIRPYTPFEVKIRSYNRRGDGPESLVA 803
Query: 481 TIW 483
++
Sbjct: 804 VVY 806
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 116/291 (39%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG + LE R + L I + +D +YQC
Sbjct: 57 VTLACRARASPPATYRWKMNGTEMK-----LEPGSRQQLVGGNLVIMNPSKAQDAGVYQC 111
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 112 LASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 169
Query: 124 -KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 170 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 227
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + P + + + L C A + RI +
Sbjct: 228 NLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 276
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + F D G YEC ++T G+ + + +IV+ P
Sbjct: 277 DGSLSPQWATAEPTLQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQAQP 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 108/273 (39%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I V +D G Y C A N G D +GR+IV P +
Sbjct: 275 K---VDGSLSPQWATAEPTLQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQAQPEWLR 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ + +L C+A + A W NG + + + + G L
Sbjct: 332 VISDR-EADIGSDLHWACAAAGKP--RPAVRWLRNGEPLTSQA-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 86/215 (40%), Gaps = 39/215 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SSA T P F+++PL E T VT+ C A+P + WK +G +
Sbjct: 25 WSSAWGSPATFGPVFEEQPLGLLFPEESTEE----KVTLACRARASPPATYRWKMNGTEM 80
Query: 131 G-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQ 185
G R+ GNL+I +P D+G+Y C A+N G E+ R L S E+
Sbjct: 81 KLEPGSRQQLVGGNLVIMNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEER 140
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG---- 240
P K L AH L +Y W N E PN I DG
Sbjct: 141 DPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFV 185
Query: 241 ----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 186 SQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 186/500 (37%), Gaps = 72/500 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P W + E+L NS + + D L IR ++ D Y C A+
Sbjct: 440 CQPRAAPKAVVLWSKGTEILVNSSRVTV-------TPDGTLIIRNVS-RSDEGKYTCFAE 491
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
N + S+ L V +TL PS L G N+T+ C+ P FV
Sbjct: 492 NFMGKANSTGTLSVRDATKITLAPSSADINL--------GDNLTLQCHASHDPTMDLTFV 543
Query: 123 WKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D I G R + E G+L I G Y+CTA V + ++
Sbjct: 544 WTLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDSASKEATVL 603
Query: 176 VLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
V P P + + + ++QL S + +A +T + + ++ T
Sbjct: 604 VRGPPG----APGGVVVRDISDTSVQLSWSRGFDNHSPIAK-YTLQARTLPSGKWKQVRT 658
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLP 282
NI+G +YE V ++ KI TK P P
Sbjct: 659 NPTNIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIQTKEA----APSVAP 714
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITH-----YKIIARTNWNSTWFNVSEHVIGKEVD 337
G+ T+ WT + R H Y + R ++W + V G +
Sbjct: 715 SGLSGGGGAPGELTVTWTPMS---REYQHGGGFGYLVSFRRQGGTSW--QTARVPGADAQ 769
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
+ ++ + P++ +E K+ + N G G S + Y+ ++P AP ++
Sbjct: 770 YFVYSNDS-----IRPYTPFEVKIRSYNRRGDGPESLVAVVYSA-EEEPRVAPPKVWAKA 823
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++++SWEP+ ++ N + Y+I + K +E ++ G A+V
Sbjct: 824 VSSSEMNVSWEPV-QQDMNGILLGYEIRYWKAGAKAAAAERVRTAGLDTSALVT--GLHA 880
Query: 458 YTEYEVKVQAINDVGPGPES 477
T+Y V V+A N G GP S
Sbjct: 881 STKYHVTVRAYNRAGTGPAS 900
>gi|426249271|ref|XP_004018373.1| PREDICTED: contactin-3 [Ovis aries]
Length = 1028
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 240/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V + C P A+P+ WKK
Sbjct: 386 CIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R +G L I V++ D+GIY+C A N G LIV P+
Sbjct: 446 GEVIVQESERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHLIVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDTIFTWYFNGALTDFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKEGTD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTNW-IQTVVTSPDTPRYVFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P + S V L
Sbjct: 798 AEEEPTIAPSQVSANSL 814
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPER--DPAM 63
+T CEA G P Y W NG ++ L + RY I+ N++ +NP R D
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDID-----LSMEYRYKLIRGNLVV---MNPNRNWDTGN 97
Query: 64 YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKP 119
YQC A N + T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 98 YQCFATNSVGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSY 155
Query: 120 KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL- 177
+++ + + + RR + E G+L I+ V D G Y+C T+ D G L
Sbjct: 156 AWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSAVTNDRVLGSPTPLV 215
Query: 178 ---------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ P Q P + A ++L C A + + + + + L
Sbjct: 216 LRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKVKL 275
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N D+G YEC+ +++ GK
Sbjct: 276 RKF--------SGVLEIPNFQQEDSGSYECIAENSRGK 305
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 190/505 (37%), Gaps = 64/505 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++ C+ P SW + GE++ E+ + F+ D L I + + D +Y
Sbjct: 425 SEVNLDCKPRASPRALSSW-KKGEVIVQES-----ERTSFLNDGGLKIVNVT-KADAGIY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFV 122
C A+NQ + L ++T P + GE +V + C + P F
Sbjct: 478 TCIAENQFGKANGTTHL-IVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDTIFT 534
Query: 123 WKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G + FE +G+L+I + SG Y C S LIV
Sbjct: 535 WYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETP 234
P E + K+ QL T+ V AY + +G + P
Sbjct: 595 RGSPGPPESV--KVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--P 650
Query: 235 NINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPG 283
+ IDG T EYE V + +G K+ T+ V P + G
Sbjct: 651 EV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSG 709
Query: 284 GVQVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
G ++ I W + NG + ++ + TNW + V +
Sbjct: 710 GGG----SRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTP 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
RY R E+ ++P+S YE KV N G G P SP + ++P APS++
Sbjct: 760 RYVFRNES-----ILPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF 456
++ +SW +P + N + Y++ + E S LK GNV A +R + S
Sbjct: 814 LSSSEIEVSWNAIPWKLSNGHLLGYEVRYWNNGGEEESSSKLKVAGNVTSARLRGLKSNL 873
Query: 457 -YYTEYEVKVQAINDVGPGPESEVV 480
YYT V+A N G GP S V
Sbjct: 874 AYYT----AVRAFNSAGTGPFSATV 894
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKVKLRKF-SGVLEIPNFQQEDSGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 355 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLI 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 RGNLVVMNPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSAV 202
>gi|348573577|ref|XP_003472567.1| PREDICTED: contactin-5-like [Cavia porcellus]
Length = 1133
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 231/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + VL I +N + D
Sbjct: 435 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLLPQTRIHTVNGVLMIHSVN-QSD 486
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 487 SGMYQCLAENKYGAIYASAELKILASAPTFAPNQLKKTVIVTKDQEVIIECKPQGSPKPN 546
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + + I +G+L I S+ D G Y C N+ G E + V P
Sbjct: 547 ISWKKGDKAVRESKKIAILPDGSLRILNASKSDEGKYVCRGENIFGSAEIVASVSVKE-P 605
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I D E+
Sbjct: 606 TKIELTPKRTELTVGESIVLNCKAIHDATLDVNFYWTLKGQPIDFEKDGGHFESIRAQAS 665
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 666 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSW 725
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 726 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPETITGDMESAMAVDLNPWVEYEF 780
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 781 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 840
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 841 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 899
Query: 480 VTI 482
V I
Sbjct: 900 VVI 902
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 107/283 (37%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE P +Y W RNG ++ LE RY + D I + +D
Sbjct: 148 SDENKVALNCEVRANPVPSYRWLRNGTQID-----LESDYRYSLIDGTFIINNPSEAKDS 202
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N + S +F R S EG V + C+P +P+
Sbjct: 203 GQYQCLATNSFGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 261
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 262 YSWVFNEFPSFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 321
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 322 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSR 380
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 381 LRKSQ--------AVLEIPNVQLEDAGIYECRAENSRGKNSFR 415
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 108/280 (38%), Gaps = 25/280 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + +ED R+ Q+ D Y C KN +
Sbjct: 258 PEIIYSWVFN----EFPSFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 313
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 314 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 373
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V +D+GIY C A N G + +G+L + P + E+L
Sbjct: 374 YIPSKSRLRK-SQAVLEIPNVQLEDAGIYECRAENSRGKNSFRGQLQIYTYPHWVEKL-N 431
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + L I+ G+L I +
Sbjct: 432 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPL-------LPQTRIHTVNGVLMIHSV 482
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGPPGLPGGVQ 286
+ +D+G Y+C+ ++ G I S + ++ P P ++
Sbjct: 483 NQSDSGMYQCLAENKYGAIYASAELKILASAPTFAPNQLK 522
>gi|73996774|ref|XP_534836.2| PREDICTED: contactin-1 isoform 1 [Canis lupus familiaris]
Length = 1007
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 245/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 331 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 375
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N T Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 376 -GMYQCIAENTHGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 434
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G + G L++ P
Sbjct: 435 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-P 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 494 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 554 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 669 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 729 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 787
Query: 480 VTI 482
I
Sbjct: 788 AVI 790
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 30 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 89 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 239
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 192/497 (38%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 425 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + R ++ V+T P+ ++ GE + + + A F+W +G +
Sbjct: 477 NN-RGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 535
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 596 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 652
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 653 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 702
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 703 GGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 760
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 761 ET-----MRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEI 814
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 815 SVHWEHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 868
Query: 464 KVQAINDVGPGPESEVV 480
+V+A N G GP S+++
Sbjct: 869 EVRACNSAGCGPPSDMI 885
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 210
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 211 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 270
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N G D+ + R+ V P +
Sbjct: 271 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENNRGKDKHQARIYVQAFPEW 322
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 323 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 364
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 365 LRLYDVTFENAGMYQCIAENTHGTI 389
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 47 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 98
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 99 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 155
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 156 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 215
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 216 IPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 266
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 267 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI 326
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 327 NDTEV-DIGSDLYWPCVAT-GKPI 348
>gi|354467484|ref|XP_003496199.1| PREDICTED: contactin-5-like [Cricetulus griseus]
Length = 1089
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 231/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG P+ Q R + +L I +N + D
Sbjct: 391 LDSGSPLQWECKATGKPKPTYRWLKNGA-------PILPQSRVDTVNGILAIHSVN-QSD 442
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L+VL PSF+ ++ + V I C P+ APKP
Sbjct: 443 AGMYQCLAENKYGAIYASAELKVLASPPSFELNQVKKTIIVTKDREVLIECQPQGAPKPA 502
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + S R I +G+L I S+ D G Y C N+ G E L V P
Sbjct: 503 ISWRKGDKAVRSNKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-P 561
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E+
Sbjct: 562 TRIELTPKRTELTVGESIVLNCKAIHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQAS 621
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 622 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 681
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W ++ + TG E+++ L PW YEF
Sbjct: 682 SPATDNHSPISSYNLQARSPFSLGW-----QIVKTVPEVITGDMESAMAVDLNPWVEYEF 736
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + G G+ +L I+WEP+ E QN
Sbjct: 737 RVVASNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEG 796
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 797 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 855
Query: 480 VTI 482
V I
Sbjct: 856 VVI 858
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 126/325 (38%), Gaps = 31/325 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ ++ CE G P TY W RNG ++ LE RY + D I N RD
Sbjct: 105 DEKNVALNCEVRGNPTPTYRWLRNGTEID-----LESDYRYSLIDGTFIISNPNEVRDSG 159
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
+YQC A N + S +F R S EG V + C+P +P+ +
Sbjct: 160 LYQCLATNTFGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 218
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C TN +
Sbjct: 219 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLT 278
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 279 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSRL 337
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
+ + +LEI N DAG YEC +++ G+ S + + + P +
Sbjct: 338 RKSQ--------AVLEIPNLQLDDAGLYECTAENSRGRNSFRGQLQIYTYPHWVQKLNDT 389
Query: 289 EVHKTSATIQWTDGATNGRPITHYK 313
++ S +QW AT G+P Y+
Sbjct: 390 QLDSGSP-LQWECKAT-GKPKPTYR 412
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 24/274 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 214 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNAR 269
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 270 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 329
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + + L I + DD+G+Y CTA N G + +G+L + P + ++L
Sbjct: 330 YIPSKSRLRKSQ-AVLEIPNLQLDDAGLYECTAENSRGRNSFRGQLQIYTYPHWVQKL-N 387
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + LQ C A + Y W NG I L ++ G+L I +
Sbjct: 388 DTQLDSGSPLQWECKATGKP--KPTYRWLKNGAPI-------LPQSRVDTVNGILAIHSV 438
Query: 249 SFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+ +DAG Y+C+ ++ G I + ++ PP
Sbjct: 439 NQSDAGMYQCLAENKYGAIYASAELKVLASPPSF 472
>gi|6680954|ref|NP_031753.1| contactin-1 precursor [Mus musculus]
gi|227497224|ref|NP_001153119.1| contactin-1 precursor [Mus musculus]
gi|227497226|ref|NP_001153120.1| contactin-1 precursor [Mus musculus]
gi|116918|sp|P12960.1|CNTN1_MOUSE RecName: Full=Contactin-1; AltName: Full=Neural cell surface
protein F3; Flags: Precursor
gi|50938|emb|CAA33075.1| F3 preprotein (AA -20 to 1000) [Mus musculus]
Length = 1020
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 250/485 (51%), Gaps = 26/485 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCIATGKPIPTIRWLKNGYSYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N + Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ + P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITN-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELE-TPNINI 238
+ P I N ++C+A + LD+ ++W+ NG I N ++ + N +
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFML 564
Query: 239 DG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
D G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS +
Sbjct: 565 DANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVAL 624
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W+ G+ N PI+ Y I +T + W + E G E++ L+PW Y
Sbjct: 625 TWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMESAKAVDLIPWMEY 679
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
EF+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE
Sbjct: 680 EFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYG 739
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
N Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 NNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798
Query: 478 EVVTI 482
V I
Sbjct: 799 LVAVI 803
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+G+Y C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGVYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVKVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCIATGKPIPTIR--WLKNGY---------------SYHKGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++ G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENAYGSI 400
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 186/499 (37%), Gaps = 65/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGG--------RRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I R + + NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 606
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L +I ++ L S ++ ++ +T I + D + +T I+G
Sbjct: 607 GPPGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEG 663
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
+ EYE V T + G P +P ++ + + +
Sbjct: 664 NMESAKAVDLIPWMEYEFRV--------VATNTLGTGEPSIPS--NRIKTDGAAPNVAPS 713
Query: 301 D---GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G R +T HY I+A ++ W V+ V + RY
Sbjct: 714 DVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 771
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 772 KDET-----MTPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 825
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ W+ + + + I Y K+ T +EY R+ + T+Y
Sbjct: 826 EISVHWKHVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDTQY 879
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+V+
Sbjct: 880 FIEVGACNSAGCGPSSDVI 898
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 120/322 (37%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W +N+ + L + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKW-----RMNNGDVDLTN-DRYSMVGGNLVINNPDKQKDAGV 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 112 YYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVKVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D +R +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPD---------IRWRKVL 279
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 280 EPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCIAT-GKPI 359
>gi|432859227|ref|XP_004069075.1| PREDICTED: contactin-4-like [Oryzias latipes]
Length = 1025
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 238/482 (49%), Gaps = 16/482 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
M A+L W C+AFG P TY W +NG+ PL DR + N LTI + D
Sbjct: 334 MAIDANLQWECKAFGEPRPTYRWLKNGQ-------PLTTHDRIHTEANTLTISKIA-LSD 385
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N + ++SA+L+V P F +RP++ T GG + + C P+A+P+
Sbjct: 386 SGMYQCIAQNAFGSIHASAELKVAASPPDFTRRPVKKATVLQRGGELVLECRPDASPRAT 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+W + +++ GGR+ + E+G L ++ +++ D G Y+C A N G S G L+V+ P
Sbjct: 446 ILWWRGSDLLRGGGRQTVMEDGTLRVTNITKLDEGRYTCVARNHFGASSSSG-LLVVKEP 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P + ++L L C ++ L + W NG I + E G
Sbjct: 505 TKIIAPPLSSDASVGQSLVLPCEVASDSTLSPVFKWFFNGKAIDFNRQDHFEMIGGGFAG 564
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L+ + N AG+Y C+V++ V +S +IV GPPG V +V T+ + W+
Sbjct: 565 DLM-VRNVQLKHAGKYVCMVQTEVDTVSAAANLIVRGPPGASETPSVTDVTDTTVKLSWS 623
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
N PIT Y + ART ++ W I D G+ + L+PW YEF+
Sbjct: 624 PAPDNHSPITMYTVQARTPFSIGW-----QTINTVPDSVPGQMMHAFVTDLIPWVDYEFR 678
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N +G GEPS+PS T P AP + GGGG G+L I+WEP+ E+Q+ +
Sbjct: 679 VVAVNAVGVGEPSTPSEPIRTKPAVPRVAPINVSGGGGTQGELVITWEPVLEEQQSGEDF 738
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R + + +T + V R S +++EV V N VG GP S+VV
Sbjct: 739 GYVVAFRPLGTSAW-IQTAVASPDASKYVYRNDSIPPLSQFEVSVGVFNSVGEGPFSQVV 797
Query: 481 TI 482
+
Sbjct: 798 VV 799
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 38/278 (13%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL--K 73
++ YSW + N E PL+ R FI L I + E D Y C +N +
Sbjct: 157 EIQYSW-----VSNREPRPLQQDARRFISQRTGNLYIAKVEAE-DAGNYTCAVRNMMTNS 210
Query: 74 TRYSSAQLRVLT-------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
+ +SS V+ +P + R E+ + +G +V + C P P W++
Sbjct: 211 SEFSSPTPLVVRRDVIMGEYEPKIEVRFPET-LHISKGMSVKLECFALGNPVPSISWRRA 269
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLI---VLHGPS 181
DGN + + KI N ++L P S +D G+Y C A N G + +KG LI V H
Sbjct: 270 DGNSLAA----KIKINHSVLEIPYFSPEDGGVYECVAENYRGKNVAKGHLIFQNVEH--L 323
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
++ Q +A NLQ C A E Y W NG + D I+ +
Sbjct: 324 HWGQTLKDAQMAIDANLQWECKAFGEP--RPTYRWLKNGQPLTTHD-------RIHTEAN 374
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
L I+ + +D+G Y+C+ ++ G I + V P
Sbjct: 375 TLTISKIALSDSGMYQCIAQNAFGSIHASAELKVAASP 412
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 135/338 (39%), Gaps = 47/338 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE--RDPAMYQCRA 68
C+A G P Y W NGE L++ + D + ++ N+L NP+ +YQC A
Sbjct: 55 CKAKGNPPPHYRWKVNGEDLDTNS----DSNYRLLEGNLLI---SNPDFISHGGVYQCIA 107
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-KPKFVW--KK 125
N T S SF ++P + EG V + C P + + ++ W +
Sbjct: 108 TNVFGTIVSRNARVQFAFLQSFSRKP-RNPVSVREGQAVVLLCAPPSHHGEIQYSWVSNR 166
Query: 126 DGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG-------RLIVL 177
+ + RR I + GNL I+ V +D+G Y+C N+ R V+
Sbjct: 167 EPRPLQQDARRFISQRTGNLYIAKVEAEDAGNYTCAVRNMMTNSSEFSSPTPLVVRRDVI 226
Query: 178 HG---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
G P + P + I+ +++L C A + +++ D N L
Sbjct: 227 MGEYEPKIEVRFPETLHISKGMSVKLECFALGNPVPSISW---------RRADGNSLAA- 276
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT- 293
I I+ +LEI S D G YECV ++ GK K +I + L G + +
Sbjct: 277 KIKINHSVLEIPYFSPEDGGVYECVAENYRGKNVAKGHLIFQNVEHLHWGQTLKDAQMAI 336
Query: 294 SATIQWTDGA-----------TNGRPI-THYKIIARTN 319
A +QW A NG+P+ TH +I N
Sbjct: 337 DANLQWECKAFGEPRPTYRWLKNGQPLTTHDRIHTEAN 374
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 99/499 (19%), Positives = 171/499 (34%), Gaps = 44/499 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+ +L C P T W+R +LL + ++D L + + + D
Sbjct: 426 LQRGGELVLECRPDASPRATILWWRGSDLLRG------GGRQTVMEDGTLRVTNIT-KLD 478
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y C A+N SS+ L V+ PL S+ G+ + ++ P
Sbjct: 479 EGRYTCVARNHFGAS-SSSGLLVVKEPTKIIAPPLSSDASVGQSLVLPCEVASDSTLSPV 537
Query: 121 FVWKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
F W +G I R+ FE G+L++ V +G Y C + L
Sbjct: 538 FKWFFNGKAI-DFNRQDHFEMIGGGFAGDLMVRNVQLKHAGKYVCMVQTEVDTVSAAANL 596
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL--LDVAYIWTHNGVRIGNMDLNELE 232
IV P E P +T ++L S + + + + IG +N +
Sbjct: 597 IVRGPPGASET--PSVTDVTDTTVKLSWSPAPDNHSPITMYTVQARTPFSIGWQTINTVP 654
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
++ G ++ +YE V + + + E P +V ++
Sbjct: 655 D---SVPGQMMHAFVTDLIPWVDYEFRVVAVNAVGVGEPSTPSEPIRTKPAVPRVAPINV 711
Query: 293 TSATIQWTDGATNGRPITH---------YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
+ + P+ Y + R S W + V + +Y R
Sbjct: 712 SGGGGTQGELVITWEPVLEEQQSGEDFGYVVAFRPLGTSAWIQTA--VASPDASKYVYRN 769
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
++ + P S +E V N +G G P S + +P +APS I G ++
Sbjct: 770 DS-----IPPLSQFEVSVGVFNSVGEG-PFSQVVVVLSSEGEPSEAPSDIRGRAASASEI 823
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
+ WEP+P N Y +FW + +A ++ T Y++
Sbjct: 824 VVFWEPVPSRSTNEIISYELLFWEEGTQQSDAGRVRAPNNTALLAGLKA-----STVYQI 878
Query: 464 KVQAINDVGPGPESEVVTI 482
V+A N G GP S V I
Sbjct: 879 SVRAQNSAGFGPCSPAVNI 897
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 15/197 (7%)
Query: 88 PSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNL 144
P F + P + G N+ I C + P P + WK +G + S ++ E GNL
Sbjct: 31 PVFSQEPSDIIFPMSTGDNLVIINCKAKGNPPPHYRWKVNGEDLDTNSDSNYRLLE-GNL 89
Query: 145 LIS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRC 202
LIS P G+Y C ATNV G S+ + + + P +++ + + L C
Sbjct: 90 LISNPDFISHGGVYQCIATNVFGTIVSRNARVQFAFLQSFSRKPRNPVSVREGQAVVLLC 149
Query: 203 SAHTEELLDVAYIWTHNG-VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
+ + ++ Y W N R D I+ G L I DAG Y C V+
Sbjct: 150 APPSHH-GEIQYSWVSNREPRPLQQDARRF----ISQRTGNLYIAKVEAEDAGNYTCAVR 204
Query: 262 STV---GKISTKTTVIV 275
+ + + S+ T ++V
Sbjct: 205 NMMTNSSEFSSPTPLVV 221
>gi|426341233|ref|XP_004035953.1| PREDICTED: contactin-3 [Gorilla gorilla gorilla]
Length = 1028
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 244/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + +G L I+ V++ D+GIY+C A N G L+V P+
Sbjct: 446 GDVSVQEHERISLLNDGGLKIANVTKADAGIYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++ + + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDID-----MSMEHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFS--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 182/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R + D L I + + D +Y C A+
Sbjct: 431 CKPRASPRARSSW-KKGDV------SVQEHERISLLNDGGLKIANVT-KADAGIYTCMAE 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 483 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 539
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 540 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 600 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 656
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 712
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 713 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 767
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 768 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 823
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + + E S +K GN A +R + S YYT V
Sbjct: 824 NTIPWKLSNGHLLGYEVRYWNGSGKEESSSKVKVAGNETSARLRGLKSNLAYYT----AV 879
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 880 RAYNSAGAGPFSATVNV 896
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
>gi|16758574|ref|NP_446198.1| contactin-5 precursor [Rattus norvegicus]
gi|55976161|sp|P97527.1|CNTN5_RAT RecName: Full=Contactin-5; AltName: Full=Neural recognition
molecule NB-2; Flags: Precursor
gi|1752643|dbj|BAA13311.1| NB-2 [Rattus norvegicus]
gi|149020699|gb|EDL78504.1| rCG31728 [Rattus norvegicus]
Length = 1099
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 231/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG PL Q R + VL I +N + D
Sbjct: 401 LDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTANGVLAIHSVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L PSF+ ++ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDREVLIECKPQGSPKPA 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + R I +G+L I S+ D G Y C N+ G E + V P
Sbjct: 513 ISWRKGDKAVRGNKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASVSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAMHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQAS 631
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 632 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 691
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 692 SPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 746
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + GG G+ +L I+WEP+ E QN
Sbjct: 747 RVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGGSGRRHELVIAWEPVSEEFQNGEG 806
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S++
Sbjct: 807 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 865
Query: 480 VTI 482
V I
Sbjct: 866 VVI 868
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 125/326 (38%), Gaps = 31/326 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P TY W RNG ++ LE RY + D I + RD
Sbjct: 114 SDEKKVALNCEVRGNPSPTYRWLRNGTEID-----LESDYRYSMIDGTFIINNPSESRDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
+YQC A N + S +F R S EG V + C+P +P+
Sbjct: 169 GLYQCLATNTFGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPTTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L + + +LEI N DAG YEC +++ GK S + + + P +
Sbjct: 347 LRKSQ--------AVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKLND 398
Query: 288 VEVHKTSATIQWTDGATNGRPITHYK 313
++ S +QW AT G+P Y+
Sbjct: 399 TQLDSGSP-LQWECKAT-GKPRPTYR 422
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 105/275 (38%), Gaps = 26/275 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNAR 279
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ LTL+ P + + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVH-FPTTVTAAKGTTVKMECFALGNPVPTITWMKVN 338
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
I S R + L I + DD+GIY CTA N G + +G+L + P + ++L
Sbjct: 339 GYIPSKSRLRK-SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKL- 396
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + LQ C A + Y W NG + L ++ G+L I +
Sbjct: 397 NDTQLDSGSPLQWECKATGKP--RPTYRWLKNGAPL-------LPQSRVDTANGVLAIHS 447
Query: 248 ASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+ +DAG Y+C+ ++ G I + I+ PP
Sbjct: 448 VNQSDAGMYQCLAENKYGAIYASAELKILASPPSF 482
>gi|351709949|gb|EHB12868.1| Contactin-5, partial [Heterocephalus glaber]
Length = 922
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 231/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q+R + VL I +N + D
Sbjct: 223 LDSGSALQWECKATGKPRPTYRWLKNG-------VPLLPQNRVNTANGVLMIHSVN-QSD 274
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 275 SGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKNREVIIECKPQGSPKPN 334
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +GNL I S+ D G Y C N+ G E + V P
Sbjct: 335 ISWKKGDKAVRENKRLAILPDGNLRILNASKSDEGNYVCKGENIFGSAEIVASVSVKE-P 393
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E
Sbjct: 394 TRIELTPKRTELTVGESIVLNCKAIHDASLDVNFYWTLKGQPIDFEKEGGHFENIRAQAS 453
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 454 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSW 513
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 514 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPETITGDMESAMAVDLNPWVEYEF 568
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 569 RVVATNPIGTGDPSTPSRLIRTNEAVPKIAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 628
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 629 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 687
Query: 480 VTI 482
V I
Sbjct: 688 VVI 690
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 106/273 (38%), Gaps = 27/273 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 46 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 101
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVW-KKDG 127
+ LTL+ E + A +G V + C P P W K +G
Sbjct: 102 VLSPPTPLTLRDDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKANG 161
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
I G RK L I V DD+GIY C A N G + +G+L + P + E+L
Sbjct: 162 YIPGKSRLRK--SQAVLEIPNVQLDDAGIYECRAENARGKNSFRGQLQIYTYPHWVEKL- 218
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + LQ C A + Y W NGV + L +N G+L I +
Sbjct: 219 NDTQLDSGSALQWECKATGKP--RPTYRWLKNGVPL-------LPQNRVNTANGVLMIHS 269
Query: 248 ASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +D+G Y+C+ ++ G I S + ++ P
Sbjct: 270 VNQSDSGMYQCLAENKYGAIYASAELKILASAP 302
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 768 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEHQGSQV---SLGWEPVRPLA 823
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ ++ Q ET K AVV +P Y ++++A ++ G
Sbjct: 824 NESEVLGYKVFYRQEGHSDSQVIETQKPQ-----AVVPLPDAGVYI---IEIRAYSEGGD 875
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 876 GTVSSQIRV 884
>gi|410951585|ref|XP_003982475.1| PREDICTED: contactin-3 [Felis catus]
Length = 1029
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 243/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 334 NLFWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+PK WK+
Sbjct: 386 CIAENKHGLIYSSAELKVIASAPDFSKTPMKKLLQVQVGSMVSLDCKPRASPKALRSWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R ++G L I V++ D G Y+C A N G RL+V P+
Sbjct: 446 GDVIVQENERISFLKDGGLQIVNVTKADVGTYTCIAENQFGKANGTTRLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGTLTDFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGTD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSVQARTPFSVGWQTAT--TVPEIID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P + S V L
Sbjct: 798 AEEEPTIAPSQVSANSL 814
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
+G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 VAKGATVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDTGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 298 VAENSRGRNVARGRLTYYAKP-HWVQLIRDVEIAVEDNLFWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G I S + VI
Sbjct: 355 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVIASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 112/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +N + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDINPSM-----EYRYKLNGGNLVV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L I+ V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMVTNTRVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + +A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPVAKGATVKLECFALGNPVPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N D G YECV +++ G+
Sbjct: 277 KF--------NGVLEIPNFQQEDTGSYECVAENSRGR 305
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 181/498 (36%), Gaps = 63/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW R ++ E++ F++D L I + + D Y C A+N
Sbjct: 431 CKPRASPKALRSWKRGDVIVQ------ENERISFLKDGGLQIVNVT-KADVGTYTCIAEN 483
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q + +L V+T P + GE +V + C + P F W +G
Sbjct: 484 QFGKANGTTRL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGT 540
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 541 LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGP 600
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + K+ QL T+ V P I IDG
Sbjct: 601 PENV--KVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEI-IDGKT 657
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
T EYE V + +G K+ T+ V P + GG
Sbjct: 658 HTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----S 713
Query: 292 KTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
++ I W + NG + ++ + TNW + V + RY R E+
Sbjct: 714 RSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES 767
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+VP+S YE KV N G G P SP + ++P APS++ ++ +
Sbjct: 768 -----IVPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEV 821
Query: 406 SWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYE 462
SW +P + N + Y++ +W N E S +K GN A +R + S YYT
Sbjct: 822 SWNTIPWKLSNGHLLGYEVRYW--NNGEEESSSKVKVAGNETSARLRGLKSNVAYYT--- 876
Query: 463 VKVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 877 -AVRAYNSAGAGPFSTTV 893
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F + P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFIREPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDINPSMEYRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
>gi|390339774|ref|XP_785256.3| PREDICTED: contactin-4-like [Strongylocentrotus purpuratus]
Length = 822
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 235/466 (50%), Gaps = 27/466 (5%)
Query: 21 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSA 79
Y+W+RNGE+L + +DR+ ++N+ T+ + D AMYQC A N YS+A
Sbjct: 350 YTWYRNGEILTA-------RDRHQFRNNLETLIISDLMTTDTAMYQCFASNDHGMIYSAA 402
Query: 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 139
QL V P F P+E++ A VT+ C+ +AAP P W+ DG I G R +
Sbjct: 403 QLSVRAFPPEFLS-PMETDKPAPLTATVTVVCDVDAAPAPTVTWQHDGQPITDGARYNLT 461
Query: 140 ENG-NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 198
+ NL+I V D G Y CTATN +G +G L + + P + ++
Sbjct: 462 ADPPNLVIIDVQMSDGGTYQCTATNSNGTVTGEGSLDIKDA-TVITGHPDNTLVEVGQST 520
Query: 199 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
L+C A +E L++ Y+W HNGV I DL+E+E + D G LEI +A D GEY C
Sbjct: 521 TLKCKAAHDEYLELTYLWEHNGVEI---DLSEIERYRMR-DNGNLEIVSAQLRDGGEYTC 576
Query: 259 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 318
V + + T+ + GPPG P G+ V EV +A ++W G N PIT + I +T
Sbjct: 577 VALTVADSDRSSATLDIAGPPGPPSGLSV-EVENLAANLRWVPGTDNNSPITSFTIEGQT 635
Query: 319 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SP 377
+ + W + G + N L P+S Y F+VIA N +G G PS P
Sbjct: 636 DHSDEWVELRS-------GESAGSNSVRLVN-LDPFSLYSFRVIAVNRIGRGTPSEPVEA 687
Query: 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 437
T P +PS +GGGGG GDL I+W+ P K N+ + YK+ W+K D++ S
Sbjct: 688 GVKTGKTAPTASPSNVGGGGGNTGDLRITWDKFPSSKWNSETVSYKVEWQKV-DSQVSST 746
Query: 438 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
L E N I + E YT+Y V+VQA ND G GP SE I+
Sbjct: 747 GLLEEPNAIIYTATLGIEL-YTQYNVRVQAKNDEGEGPFSEWAVIY 791
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 143/390 (36%), Gaps = 72/390 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMYQCRA 68
C A G +TY+W ++G L+ T R I LTI +PER D Y C A
Sbjct: 47 CRATGDEPITYTWEKDGAPLSQAT-----NARLVITPGQLTIT--SPERTVDGGEYVCMA 99
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAA-PKPKFVWKKD 126
NQ+ + S V SF +++ AG+GG VT CNP P W +
Sbjct: 100 SNQVGSVRSLPAELVFAYVDSFDPSATSTQSLTAGQGGCVT--CNPPPHFPGILVNWFHE 157
Query: 127 GNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC--------------------TATNVH 165
++ S R ++ ++G L D+G Y C T T
Sbjct: 158 NMLVDSSDSRIRVMDDGRLCFFYALASDAGAYRCQVKSNVISDGGVEMRVSPLVTVTVNA 217
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH----TEELLDVAYIWTH--- 218
G S R++ E P +T A +++ C + T ++ V ++ T
Sbjct: 218 GSSSSAIRIV-------QENRPTDVTTIAGEDVKFECFFYGPQPTGQIPRVQWVRTSPPG 270
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G+ G L E G +L I DAG Y C + V ++ + E P
Sbjct: 271 AGLPTGRAVLEE--------GGEILSIVGVQLEDAGSYLCYIDD-VNSGASAGLNVAEAP 321
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
+ + ++ K T+Q + + A TW+ E + ++ +
Sbjct: 322 AWVS---EPMDAMKDINTMQ------------EWNVEAEEADQYTWYRNGEILTARDRHQ 366
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELG 368
+ E I + L+ T ++ A N+ G
Sbjct: 367 FRNNLETLIISDLMTTDTAMYQCFASNDHG 396
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 106 NVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLI-SPVSRDDSGIYSCTATN 163
+V++ C + W+KDG + R + G L I SP D G Y C A+N
Sbjct: 42 SVSLHCRATGDEPITYTWEKDGAPLSQATNARLVITPGQLTITSPERTVDGGEYVCMASN 101
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKIT----IAAHRNLQLRCSA--HTEELLDVAYIWT 217
G S +V +Y + P T + A + + C+ H +L W
Sbjct: 102 QVGSVRSLPAELVF---AYVDSFDPSATSTQSLTAGQGGCVTCNPPPHFPGIL---VNWF 155
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
H NM ++ ++ +D G L A +DAG Y C VKS V
Sbjct: 156 HE-----NMLVDSSDSRIRVMDDGRLCFFYALASDAGAYRCQVKSNV 197
>gi|344287936|ref|XP_003415707.1| PREDICTED: contactin-5 [Loxodonta africana]
Length = 1109
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 410 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLLPQSRVEMVNGVLMIHKVN-QSD 461
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ +G V + C P+ +PKP
Sbjct: 462 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKGQEVIVECKPQGSPKPT 521
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E + V P
Sbjct: 522 ISWKKGDKAVRENKRIAILPDGSLRIQNASKSDEGKYVCQGENVFGSAEIIASVSVKE-P 580
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + L+V + WT G I + E+ +
Sbjct: 581 TRIELTPKRTELTVGESIVLNCKAIHDASLEVTFYWTLKGQPIDFEKEGGHFESIRVQAS 640
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 641 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSW 700
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
A N P++ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 701 GPAADNHSPVSSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVELNPWVEYEF 755
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 756 RVVATNPIGTGDPSTPSRIIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 815
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 816 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 874
Query: 480 VTI 482
V I
Sbjct: 875 VVI 877
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 13/180 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P W K I S R + L I V DD+G Y C
Sbjct: 321 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAMLEIPNVQLDDAGTYECR 379
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 380 AENSRGKNSFRGQLQVYTYPHWIEKL-NDTHLDSGSPLRWECKATGKP--RPTYRWLKNG 436
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
V + L + + G+L I + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 437 VPL-------LPQSRVEMVNGVLMIHKVNQSDAGMYQCLAENKYGAIYASAELKILASAP 489
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 8/160 (5%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164
V C + P P + W ++G I S R + + ++ +P+ DSG Y C A N
Sbjct: 131 VAFDCEVRSNPVPSYRWFRNGTEIDLESDYRYSLIDGTFIISNPIEAKDSGHYQCLAANT 190
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G S+ ++ +E + + L + S+H+ + + Y W N
Sbjct: 191 FGSILSREAILQFAWLDNFEYQFYFMYFLSE--LLVPPSSHSRN-IQIIYSWVFNEF--- 244
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 245 PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 284
>gi|344276488|ref|XP_003410040.1| PREDICTED: contactin-6 [Loxodonta africana]
Length = 1016
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 322 SLFWECKASGKPSPYYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGIYQ 373
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+L+VL P+F K P++ + GG+++I C P A P+ WK+
Sbjct: 374 CAAENKYQIIYANAELKVLASAPNFSKNPIKKVSVVQVGGDISIECKPIAFPRAAVSWKR 433
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I V+R D+G Y+C ATN G+ +S G L+V +
Sbjct: 434 GTENLRQSKRVFLIEDGSLKIYNVTRSDAGSYTCIATNQFGVAKSTGSLVVKER-TVITI 492
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W+ NG I DL + T I G G
Sbjct: 493 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDII---DLKKGVTHFERIGGESAGD 549
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P V+V + +++ + W G
Sbjct: 550 LMIRNIQLNHSGKYMCTVQTTLEILSAVADIIVRGPPGPPEDVRVEHISSSTSQLSWRPG 609
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 610 PDNNSPIQIFTIQTRTPFSLGW-----QAVSTVPEILNGKTYNATVVGLSPWVEYEFRVV 664
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 665 AGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEGFGY 724
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + + R S + +EVKV N+ G G S +
Sbjct: 725 IVMFRPVGSTTWTKERVLSVESSRF-IYRNESIIPLSPFEVKVGVYNNEGEGSLSTASIV 783
Query: 483 W 483
+
Sbjct: 784 Y 784
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 192/505 (38%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P SW R E L + + + I+D L I Y D Y
Sbjct: 413 GDISIECKPIAFPRAAVSWKRGTENLR------QSKRVFLIEDGSLKI-YNVTRSDAGSY 465
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ S+ L V+T+ PS + + GE ++ + C P
Sbjct: 466 TCIATNQFGVAKSTGSLVVKERTVITIPPS------KMDVTVGE--SIVLPCQVSHDPSI 517
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G+II FE G+L+I + + SG Y CT + +
Sbjct: 518 EVVFVWSFNGDIIDLKKGVTHFERIGGESAGDLMIRNIQLNHSGKYMCTVQTTLEILSAV 577
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + ++ L R + + I T +G ++ +
Sbjct: 578 ADIIVRGPPGPPEDVRVEHISSSTSQLSWRPGPDNNSPIQIFTIQTRTPFSLGWQAVSTV 637
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 638 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTN 694
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y ++ R ++TW E V+ E
Sbjct: 695 INGGGG----SRSELVITWESIPEELQNGEGF-GYIVMFRPVGSTTW--TKERVLSVESS 747
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ S Y+ D+P AP
Sbjct: 748 RFIYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTASIVYSG-EDEPRMAPRGTSVQS 801
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV V I
Sbjct: 802 VSASEMEVSWNAIDWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TVKNITGLKA 859
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 860 NTLYFASVRAYNTAGTGPSSTPVNV 884
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 32/260 (12%)
Query: 16 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLK 73
V D++Y+W N L +++ +R F+ L I + P D Y C N+
Sbjct: 138 VGDLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEA 191
Query: 74 TRYSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
R L + P + R E+ A + ++ + C P P W+
Sbjct: 192 QRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSIKLECFALGNPVPNISWR 250
Query: 125 K-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ DG+++ G+ K ++ +L P ++D G Y CTA N+ G + +KG+LI + P
Sbjct: 251 RMDGSLLP--GKVKYSKSKAILEIPNFQQEDEGFYECTAGNLRGRNIAKGQLI-FYAPPE 307
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+EQ ++ + +L C A + Y W NG R LN E I I+ G
Sbjct: 308 WEQKIQNTYLSIYDSLFWECKASGKP--SPYYTWLKNGER-----LNPEE--RIQIENGT 358
Query: 243 LEITNASFADAGEYECVVKS 262
L IT + +D+G Y+C ++
Sbjct: 359 LIITMLNVSDSGIYQCAAEN 378
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 104/292 (35%), Gaps = 28/292 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+++++ C A G P Y W +N ++ Y + L I +D
Sbjct: 29 SSESEIILNCAAHGYPLPQYRWKQNDTDID-----FTMSYHYRLDGGSLAISSPPTAQDI 83
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N L T S F+ + S EG V + C P
Sbjct: 84 GTYQCLATNPLGTILSRKAKLQFAYIEEFETK-TRSTVSVREGQGVVLLCGPPPHVGDLS 142
Query: 121 FVWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+ W + N + RR + E GNL I+ V D G Y+C TN +G L
Sbjct: 143 YAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPPTPL 202
Query: 178 ----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ P + P I A +++L C A + ++++ + G +
Sbjct: 203 VQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPNISWRRMDGSLLPGKVK 262
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ +LEI N D G YEC + G+ K +I PP
Sbjct: 263 YSK--------SKAILEIPNFQQEDEGFYECTAGNLRGRNIAKGQLIFYAPP 306
>gi|149728474|ref|XP_001493497.1| PREDICTED: contactin-3 [Equus caballus]
Length = 1026
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 242/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 332 NLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 383
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ WKK
Sbjct: 384 CIAENKHGLVYSSAELKVVAAAPDFSKTPMKKLIQVQVGSVVSLDCKPRASPRALSSWKK 443
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R + G L I+ V++ D G Y+C A N G L+V P+
Sbjct: 444 GDAIVQENERISFLKGGGLKIANVTKADVGTYTCIAENQFGKANGTTYLVVTE-PTRITL 502
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 503 APSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALTDFKKDGSHFEKVGGSSSGDLM- 561
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 562 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGTD 621
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 622 NHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 676
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 677 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 736
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 737 AFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSLYEVKVGVYNNKGEGPFSPVTTVFS 795
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 796 AEEEPTVAPSQVSANSL 812
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 118/278 (42%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +N L + RY + L + LNP R D Y
Sbjct: 44 VTLNCEARGNPSPHYRWQLNGSDIN-----LSMEYRYKLNGGNLVV--LNPNRNWDTGSY 96
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 97 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 154
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+++ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 155 WIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVL 214
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R +
Sbjct: 215 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQI------NWRRSDGLPFS 268
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+++++ N G+LEI N DAG YEC+ +++ GK
Sbjct: 269 SKIKSRKFN---GVLEIPNFQQEDAGSYECLAENSRGK 303
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 237 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKSRKF-NGVLEIPNFQQEDAGSYEC 295
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 296 LAENSRGKNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLYWECRASGKP--KPSYRWLKN 352
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 353 GEA---LVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVAAA 405
Query: 278 P 278
P
Sbjct: 406 P 406
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 181/498 (36%), Gaps = 62/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P SW + ++ E++ F++ L I + + D Y C A+N
Sbjct: 429 CKPRASPRALSSWKKGDAIVQ------ENERISFLKGGGLKIANVT-KADVGTYTCIAEN 481
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGN 128
Q + L V+T P + GE +V + C + P F W +G
Sbjct: 482 QFGKANGTTYL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNGA 538
Query: 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 539 LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGP 598
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + K+ QL T+ V P + IDG
Sbjct: 599 PENV--KVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEV-IDGKT 655
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
T EYE V + +G K+ T+ V P + GG
Sbjct: 656 HTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----S 711
Query: 292 KTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
++ I W + NG + ++ + TNW + V + RY R E+
Sbjct: 712 RSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNES 765
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
++P+S YE KV N G G P SP + ++P APS++ ++ +
Sbjct: 766 -----IMPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEV 819
Query: 406 SWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYE 462
SW +P + N + Y++ +W + E S+ +K GN A +R + S YYT
Sbjct: 820 SWNAVPWKLSNGHLLGYEVRYWNNGGEEELSSK-VKVAGNETSARLRGLKSNLAYYT--- 875
Query: 463 VKVQAINDVGPGPESEVV 480
V+A N G GP S+ V
Sbjct: 876 -AVRAYNSAGTGPFSDTV 892
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F + P S G E VT+ C P P + W+ +G+ I S R
Sbjct: 19 LLLQGPVFIREPSNSIFPVGSEDKKVTLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLN 78
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 79 GGNLVVLNPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 138
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 139 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 192
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 193 TCVVTSTV 200
>gi|395733532|ref|XP_002813561.2| PREDICTED: contactin-3 [Pongo abelii]
Length = 958
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 245/496 (49%), Gaps = 20/496 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+QC
Sbjct: 265 LYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTISNLS-VTDSGMFQC 316
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+L+V+ P F K P++ G V++ C P+A+P+ WKK
Sbjct: 317 IAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPKASPRAHSSWKKG 376
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 377 DVSVQEHERISLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITLA 435
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + ++ ++ L C + LLD+ + W NG D + E + G L+ I
Sbjct: 436 PSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM-I 494
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G N
Sbjct: 495 RNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDN 554
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+T Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A N
Sbjct: 555 HSPVTSYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVASN 609
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 610 KIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVA 669
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW-- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 670 FRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSA 728
Query: 484 -HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 729 EEEPTVAPSQVSANSL 744
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 181/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R ++D L I + + D Y C A+
Sbjct: 361 CKPKASPRAHSSW-KKGDV------SVQEHERISLLKDGGLKIANVT-KADAGTYTCMAE 412
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 413 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 469
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 470 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 529
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 530 PPENVKVDEITDTTAQLSWKEGKDNHSPVTSYSIQARTPFSVGWQTVTTV--PEV-IDGK 586
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 587 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 642
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 643 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 697
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 698 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 753
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + E S +K GN A +R + S YYT V
Sbjct: 754 NIIPWKLSNGHLLGYEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYT----AV 809
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 810 RAYNSAGAGPFSATVNV 826
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 96/246 (39%), Gaps = 27/246 (10%)
Query: 37 LEDQDRYFIQDNVLTIRYLNPER--DPAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKR 93
+ + RY + L + +NP R D YQC A N L T S A+L+ L+ S R
Sbjct: 1 MSMEHRYKLNGGNLVV--INPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLEDS-DTR 57
Query: 94 PLESETYAGEGGNVTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVS 150
+ T + +PE + + W + + + RR + E G+L IS V
Sbjct: 58 TRVTLTIRDSNSQTLLCGSPEHFEQLSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVE 117
Query: 151 RDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQL 200
D G Y+C T++ G L + P Q P + A ++L
Sbjct: 118 PSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKL 177
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
C A + + + + + L + G+LEI N DAG YEC+
Sbjct: 178 ECFALGNPIPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIA 229
Query: 261 KSTVGK 266
+++ GK
Sbjct: 230 ENSRGK 235
>gi|402859578|ref|XP_003894229.1| PREDICTED: contactin-3-like, partial [Papio anubis]
Length = 832
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 244/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 327 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTISNLS-VTDSGMFQ 378
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 379 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 438
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 439 GDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 497
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 498 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 556
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 557 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 616
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W ++ + + +D G+ + L PW YEF+V+A
Sbjct: 617 NHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 671
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 672 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 731
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 732 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 790
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 791 AEEEPTVAPSQVSANSL 807
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 19/232 (8%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 232 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 290
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 291 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 347
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 278
G + L E I I+ G L I+N S D+G ++C+ ++ G + S+ +V
Sbjct: 348 G---AALVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 400
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
P V ++ D P AR++W +V EH
Sbjct: 401 PDFSKNPMKKLVQVQVGSLVSLDCKPRASP------RARSSWKKGDVSVQEH 446
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 141/402 (35%), Gaps = 42/402 (10%)
Query: 44 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 103
++D L I + + D Y C A+NQ + L V+T P + GE
Sbjct: 451 LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE 508
Query: 104 GGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSG 155
+V + C + P F W +G + FE +G+L+I + SG
Sbjct: 509 --SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSG 566
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y C S LIV P E + L + + I
Sbjct: 567 KYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI 626
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-------- 265
+G + + P + IDG T EYE V + +G
Sbjct: 627 QARTPFSVGWQTITTV--PEV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPS 683
Query: 266 -KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWN 321
K+ T+ V P + GG ++ I W + NG Y + R
Sbjct: 684 EKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGV 738
Query: 322 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
+TW + V + RY R E+ +VP+S YE KV N G G P SP +
Sbjct: 739 TTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFS 790
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
++P APS++ ++ +SW +P + N + Y+
Sbjct: 791 AEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYE 832
>gi|355559498|gb|EHH16226.1| hypothetical protein EGK_11479 [Macaca mulatta]
Length = 1028
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 244/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSM-----EHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFN--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N S D+G ++C+ ++ G + S + V+
Sbjct: 355 G---AALVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G +I S R
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSLV 202
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 166/461 (36%), Gaps = 48/461 (10%)
Query: 44 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 103
++D L I + + D Y C A+NQ + L V+T P + GE
Sbjct: 458 LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE 515
Query: 104 GGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSG 155
+V + C + P F W +G + FE +G+L+I + SG
Sbjct: 516 --SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSG 573
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y C S LIV P E + L + + I
Sbjct: 574 KYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI 633
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-------- 265
+G + + P + IDG T EYE V + +G
Sbjct: 634 QARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPS 690
Query: 266 -KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWN 321
K+ T+ V P + GG ++ I W + NG Y + R
Sbjct: 691 EKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGV 745
Query: 322 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
+TW + V + RY R E+ +VP+S YE KV N G G P SP +
Sbjct: 746 TTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFS 797
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 441
++P APS++ ++ +SW +P + N + Y++ + E S +K
Sbjct: 798 AEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNGGGKEESSSKVKV 857
Query: 442 YGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
GN A +R + S YYT V+A N G GP S V
Sbjct: 858 AGNETSARLRGLKSNLAYYT----AVRAYNSAGAGPFSATV 894
>gi|380788833|gb|AFE66292.1| contactin-3 precursor [Macaca mulatta]
Length = 1028
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 244/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTTM-----EHRYKLNGGNLVV--INPNRNWDTGAY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFN--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N S D+G ++C+ ++ G + S + V+
Sbjct: 355 G---AALVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 166/461 (36%), Gaps = 48/461 (10%)
Query: 44 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 103
++D L I + + D Y C A+NQ + L V+T P + GE
Sbjct: 458 LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE 515
Query: 104 GGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSG 155
+V + C + P F W +G + FE +G+L+I + SG
Sbjct: 516 --SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSG 573
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y C S LIV P E + L + + I
Sbjct: 574 KYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI 633
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-------- 265
+G + + P + IDG T EYE V + +G
Sbjct: 634 QARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPS 690
Query: 266 -KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWN 321
K+ T+ V P + GG ++ I W + NG Y + R
Sbjct: 691 EKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGV 745
Query: 322 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
+TW + V + RY R E+ +VP+S YE KV N G G P SP +
Sbjct: 746 TTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFS 797
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 441
++P APS++ ++ +SW +P + N + Y++ + E S +K
Sbjct: 798 AEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNGGGKEKSSSKVKV 857
Query: 442 YGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
GN A +R + S YYT V+A N G GP S V
Sbjct: 858 AGNETSARLRGLKSNLAYYT----AVRAYNSAGAGPFSATV 894
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN 141
+L P F K P S G E +T+ C P P + W+ +G+ I + + N
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTTMEHRYKLN 80
Query: 142 GN--LLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
G ++I+P D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGAYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSLV 202
>gi|345787930|ref|XP_542227.3| PREDICTED: contactin-5 [Canis lupus familiaris]
Length = 1100
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q+R + + VL I +N + D
Sbjct: 401 LDSGSPLQWECKATGKPRPTYRWLKNG-------VPLLPQNRIEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ +G V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKGQEVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R +G+L I S+ D G Y C NV G E + V P
Sbjct: 513 ISWKKGDKAVRENKRIANLPDGSLRILNASKSDEGKYVCQGENVFGSSEIIASVSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LD+ + WT G I + E+
Sbjct: 572 TKIELTPKRTELTVGESIVLNCKAIHDASLDITFYWTLKGQPIDFEKEGGHFESIRAQAS 631
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 632 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 691
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 692 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTIPEIITGDLESAMAVDLNPWVEYEF 746
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 747 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 806
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 807 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 865
Query: 480 VTI 482
V I
Sbjct: 866 VVI 868
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 122/317 (38%), Gaps = 31/317 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA P Y W RNG ++ LE RY + D I +D YQC A N
Sbjct: 123 CEAHSNPVPNYRWLRNGTEID-----LESDYRYSLIDGTFIISNPGEAKDSGHYQCLAVN 177
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVW--KKDG 127
L + S + +F R S EG V + C+P +P+ + W +
Sbjct: 178 TLGSILSREAILQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 236
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG--- 179
+ + RR I E GNL IS V D G Y C T TN + + G
Sbjct: 237 SFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMG 296
Query: 180 ---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P P +T A +++ C A + + ++ NG L + +
Sbjct: 297 EYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKARLRKSQ---- 351
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+LEI N DAG YEC +++ GK S + + V P + ++ S
Sbjct: 352 ----AVLEIPNVQLDDAGLYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSP- 406
Query: 297 IQWTDGATNGRPITHYK 313
+QW AT G+P Y+
Sbjct: 407 LQWECKAT-GKPRPTYR 422
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 107/272 (39%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + +ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+G+Y C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGLYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + LQ C A + Y W NGV + + N +E N G+L I N
Sbjct: 398 DTQLDSGSPLQWECKATGKP--RPTYRWLKNGVPL--LPQNRIEMVN-----GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 160
E V + C + P P + W ++G I S R + + ++ +P DSG Y C
Sbjct: 115 EEKKVALNCEAHSNPVPNYRWLRNGTEIDLESDYRYSLIDGTFIISNPGEAKDSGHYQCL 174
Query: 161 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 217
A N G S+ ++ + ++ + +++ + + L CS H+ E++ Y W
Sbjct: 175 AVNTLGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWV 231
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
N + E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 232 FNEF---PSFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F V A N GYG PSS + T P QAPS + + LS+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVRATTKKSPPSQAPSNLRWEQ-QGSQLSLGWEPVRPLTNE 1003
Query: 417 APNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+ + YK+F+R++ + Q ET K A+V +P Y ++V+A ++ G G
Sbjct: 1004 SDVMGYKVFYRQEGHSNSQVIETQKPQ-----AIVPLPDAGVYV---IEVRAYSEGGDGT 1055
Query: 476 ESEVVTI 482
S + +
Sbjct: 1056 ASSQIRV 1062
>gi|410964133|ref|XP_003988610.1| PREDICTED: contactin-1 isoform 1 [Felis catus]
Length = 1018
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 244/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G + G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 680 RVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 192/497 (38%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + R ++ V+T P+ ++ GE + + + A F+W +G +
Sbjct: 488 NN-RGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 664 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NRIKTDGAAPNVAPSDV 713
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 714 GGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 771
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 772 E-----TMRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEI 825
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ W+ + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 826 SVHWDHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 879
Query: 464 KVQAINDVGPGPESEVV 480
+V+A N G GP S+++
Sbjct: 880 EVRACNSAGCGPPSDMI 896
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENNRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|348525482|ref|XP_003450251.1| PREDICTED: contactin-5-like [Oreochromis niloticus]
Length = 1100
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 234/486 (48%), Gaps = 24/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MD+ L W C+A G P TY W RNG LPL Q R I + LTI + + D
Sbjct: 403 MDSGEKLQWECKAIGRPRPTYRWLRNG-------LPLTSQGRLEIVNGELTIHKVQ-QAD 454
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ YS+A+L++L P F P+ A G +V++ C P+A+PKP+
Sbjct: 455 SGMYQCVAENKYAAIYSNAELQILASAPVFVPNPIR--VIATLGKDVSLDCKPKASPKPR 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WK+ I R + N L I SR D G Y C A N G E L V
Sbjct: 513 ITWKRGDRRIIPNKRIMLLRNNTLKIVNSSRADEGNYVCRAENQLGSAEMTAILWVKEAM 572
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM----DLNELETPNI 236
P ++ + ++ L C A + LDVA+ W N I ++T +
Sbjct: 573 RVVLS-PSRVEVTVGESVVLSCKATHDTSLDVAFQWFFNQKPINFQYDGGHFEYIQTQSS 631
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+D L I N AG+Y C +++ + + ++V GPPG PG V V E+ T+AT
Sbjct: 632 TVD---LMIRNILLKHAGKYGCRAQTSADTVFAEAELLVRGPPGPPGVVIVEEITDTTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ WT G N PI+ Y I AR+ ++ W + + + TG E+++ L PW
Sbjct: 689 LSWTRGVDNHSPISTYNIQARSPFSLGW-----QTVKTDPEPVTGDMESAMAVELNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P APS + GG G+ +L ISWEP+ E QN
Sbjct: 744 YEFRVVATNAIGTGDPSAPSRGVRTKEAVPSVAPSNVSGGNGRRHELVISWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + + R + T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-ANGTRGWKEKMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S+VV I
Sbjct: 863 SKVVII 868
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 30/269 (11%)
Query: 11 CEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C A G P T +W + NG + + R VL I + E D Y+C+A+
Sbjct: 324 CFALGNPVPTITWRKINGNI--------PKKARLRKSQAVLEIPNIQLE-DSGTYECKAE 374
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + L+V TL P + + + ++T G + C P+P + W ++G
Sbjct: 375 NPRGSTAFKGHLQVYTL-PQWVR--MINDTQMDSGEKLQWECKAIGRPRPTYRWLRNGLP 431
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
+ S GR +I NG L I V + DSG+Y C A N + S L +L + P +
Sbjct: 432 LTSQGRLEIV-NGELTIHKVQQADSGMYQCVAENKYAAIYSNAELQILASAPVFVPNPIR 490
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DGGLLEIT 246
+ +++ L C + W RI PN I L+I
Sbjct: 491 VIATLGKDVSLDCKPKASPKPRIT--WKRGDRRI---------IPNKRIMLLRNNTLKIV 539
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIV 275
N+S AD G Y C ++ +G S + T I+
Sbjct: 540 NSSRADEGNYVCRAENQLG--SAEMTAIL 566
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 124/319 (38%), Gaps = 35/319 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P TYSW+ NG ++SE RY D L I + D YQC+A+N
Sbjct: 125 CEARGNPPPTYSWYINGTQVDSEA-----DYRYTFIDGNLIISNASEITDYGKYQCKAEN 179
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVW--KKDG 127
+ S L +F + EG V + C P +P+ + W +
Sbjct: 180 SIGIVLSRDALLQFAYLGAFSTK-ARGGVSVREGQGVVLMCTPPPHSPEIIYSWVFNEFP 238
Query: 128 NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG--- 179
+ + RR I ++ GNL IS V D G Y C T TN + + G
Sbjct: 239 SFVAEDSRRFISQDTGNLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLKTDGVMG 298
Query: 180 ---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P P + +A ++L C A + + + ++ N + +
Sbjct: 299 EYEPKIEVHFPTSVLVAKGVTVRLECFALGNPVPTITW---------RKINGNIPKKARL 349
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA- 295
+LEI N D+G YEC ++ G + K + V LP V+++ + +
Sbjct: 350 RKSQAVLEIPNIQLEDSGTYECKAENPRGSTAFKGHLQVY---TLPQWVRMINDTQMDSG 406
Query: 296 -TIQWTDGATNGRPITHYK 313
+QW A GRP Y+
Sbjct: 407 EKLQWECKAI-GRPRPTYR 424
>gi|355746565|gb|EHH51179.1| hypothetical protein EGM_10513 [Macaca fascicularis]
Length = 1028
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 244/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTITNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSM-----EHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFN--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L ITN S D+G ++C+ ++ G + S + V+
Sbjct: 355 G---AALVLEE----RIQIENGALTITNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G +I S R
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSLV 202
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 166/461 (36%), Gaps = 48/461 (10%)
Query: 44 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 103
++D L I + + D Y C A+NQ + L V+T P + GE
Sbjct: 458 LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE 515
Query: 104 GGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSG 155
+V + C + P F W +G + FE +G+L+I + SG
Sbjct: 516 --SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSG 573
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y C S LIV P E + L + + I
Sbjct: 574 KYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI 633
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-------- 265
+G + + P + IDG T EYE V + +G
Sbjct: 634 QARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPS 690
Query: 266 -KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWN 321
K+ T+ V P + GG ++ I W + NG Y + R
Sbjct: 691 EKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGV 745
Query: 322 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
+TW + V + RY R E+ +VP+S YE KV N G G P SP +
Sbjct: 746 TTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFS 797
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 441
++P APS++ ++ +SW +P + N + Y++ + E S +K
Sbjct: 798 AEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNGGGKEESSSKVKV 857
Query: 442 YGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
GN A +R + S YYT V+A N G GP S V
Sbjct: 858 AGNETSARLRGLKSNLAYYT----AVRAYNSAGVGPFSATV 894
>gi|281337428|gb|EFB13012.1| hypothetical protein PANDA_013904 [Ailuropoda melanoleuca]
Length = 967
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 244/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 311 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 355
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 356 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 414
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G + G L++ P
Sbjct: 415 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-P 473
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 474 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 533
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 534 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALSW 593
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 594 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 648
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 649 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNN 708
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 709 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 767
Query: 480 VTI 482
I
Sbjct: 768 AVI 770
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 10 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 68
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 69 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 125
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 126 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 181
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 182 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 219
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 200/519 (38%), Gaps = 69/519 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 405 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 456
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + R ++ V+T P+ ++ GE + + + A F+W +G +
Sbjct: 457 NN-RGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 515
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 516 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 575
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 576 PGGL--RIEDIRATSVALSWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 632
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 633 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 682
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 683 GGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 740
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 741 E-----TMRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEI 794
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 795 SVHWEHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 848
Query: 464 KVQAINDVGPGPESEVVTIW------HDPLVIISYVCQG 496
+V+A N G GP S+++ I+ P IIS V G
Sbjct: 849 EVRACNSAGCGPPSDMIEIFTKKAPPSQPPRIISSVRSG 887
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 136 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 190
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 191 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 250
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N G D+ + R+ V P +
Sbjct: 251 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENNRGKDKHQARIYVQAFPEW 302
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 303 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 344
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 345 LRLYDVTFENAGMYQCIAENTHGAI 369
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 27 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 78
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 79 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 135
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 136 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 195
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 196 IPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 246
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 247 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI 306
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 307 NDTEV-DIGSDLYWPCVAT-GKPI 328
>gi|109035942|ref|XP_001101862.1| PREDICTED: contactin-3-like [Macaca mulatta]
Length = 1028
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 244/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTITNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTTM-----EHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFN--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L ITN S D+G ++C+ ++ G + S + V+
Sbjct: 355 G---AALVLEE----RIQIENGALTITNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 166/461 (36%), Gaps = 48/461 (10%)
Query: 44 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 103
++D L I + + D Y C A+NQ + L V+T P + GE
Sbjct: 458 LLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE 515
Query: 104 GGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSG 155
+V + C + P F W +G + FE +G+L+I + SG
Sbjct: 516 --SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSG 573
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y C S LIV P E + L + + I
Sbjct: 574 KYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSI 633
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-------- 265
+G + + P + IDG T EYE V + +G
Sbjct: 634 QARTPFSVGWQTVTTV--PEV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPS 690
Query: 266 -KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWN 321
K+ T+ V P + GG ++ I W + NG Y + R
Sbjct: 691 EKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGV 745
Query: 322 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
+TW + V + RY R E+ +VP+S YE KV N G G P SP +
Sbjct: 746 TTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFS 797
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 441
++P APS++ ++ +SW +P + N + Y++ + E S +K
Sbjct: 798 AEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNGGGKEESSSKVKV 857
Query: 442 YGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
GN A +R + S YYT V+A N G GP S V
Sbjct: 858 AGNETSARLRGLKSNLAYYT----AVRAYNSAGAGPFSATV 894
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN 141
+L P F K P S G E +T+ C P P + W+ +G+ I + + N
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDEKITLNCEARGNPSPHYRWQLNGSDIDTTMEHRYKLN 80
Query: 142 GN--LLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
G ++I+P D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSLV 202
>gi|410964135|ref|XP_003988611.1| PREDICTED: contactin-1 isoform 2 [Felis catus]
Length = 1007
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 244/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 331 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 375
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 376 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 434
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G + G L++ P
Sbjct: 435 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-P 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 494 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 554 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 669 RVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 729 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 787
Query: 480 VTI 482
I
Sbjct: 788 AVI 790
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 30 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 89 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 239
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 192/497 (38%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 425 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + R ++ V+T P+ ++ GE + + + A F+W +G +
Sbjct: 477 NN-RGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 535
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 596 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 652
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 653 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NRIKTDGAAPNVAPSDV 702
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 703 GGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 760
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 761 ET-----MRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEI 814
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ W+ + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 815 SVHWDHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 868
Query: 464 KVQAINDVGPGPESEVV 480
+V+A N G GP S+++
Sbjct: 869 EVRACNSAGCGPPSDMI 885
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 210
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 211 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 270
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N G D+ + R+ V P +
Sbjct: 271 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENNRGKDKHQARIYVQAFPEW 322
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 323 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 364
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 365 LRLYDVTFENAGMYQCIAENTHGAI 389
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 47 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 98
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 99 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 155
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 156 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 215
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 216 IPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 266
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 267 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI 326
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 327 NDTEV-DIGSDLYWPCVAT-GKPI 348
>gi|301778243|ref|XP_002924539.1| PREDICTED: contactin-1-like [Ailuropoda melanoleuca]
Length = 1121
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 244/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 445 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 489
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 490 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 548
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G + G L++ P
Sbjct: 549 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-P 607
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 608 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 667
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 668 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALSW 727
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + + G EA+ L+PW YEF
Sbjct: 728 SRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEF 782
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 783 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNN 842
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 843 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 901
Query: 480 VTI 482
I
Sbjct: 902 AVI 904
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 144 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 202
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 203 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 259
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 260 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 315
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 316 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 353
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 200/519 (38%), Gaps = 69/519 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 539 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 590
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + R ++ V+T P+ ++ GE + + + A F+W +G +
Sbjct: 591 NN-RGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYV 649
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 650 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 709
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 710 PGGL--RIEDIRATSVALSWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 766
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 767 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 816
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 817 GGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 874
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 875 E-----TMRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGVKVLSSSEI 928
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 929 SVHWEHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 982
Query: 464 KVQAINDVGPGPESEVVTIW------HDPLVIISYVCQG 496
+V+A N G GP S+++ I+ P IIS V G
Sbjct: 983 EVRACNSAGCGPPSDMIEIFTKKAPPSQPPRIISSVRSG 1021
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 270 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 324
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 325 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 384
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N G D+ + R+ V P +
Sbjct: 385 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENNRGKDKHQARIYVQAFPEW 436
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 437 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 478
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 479 LRLYDVTFENAGMYQCIAENTHGAI 503
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 161 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 212
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 213 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 269
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 270 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 329
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 330 IPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 380
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 381 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI 440
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 441 NDTEV-DIGSDLYWPCVAT-GKPI 462
>gi|296225698|ref|XP_002758609.1| PREDICTED: contactin-3 [Callithrix jacchus]
Length = 1028
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 245/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 NLYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSFWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDMNVQEHERITLLKDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVRVDEITDTTAQLSWKEGTD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W ++ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 19/232 (8%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I+ ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIANFQQEDAGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 278
G + L E I I+ G L I+N S D+G ++C+ ++ G + S+ +V
Sbjct: 355 GAA---LVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
P V ++ D P AR+ W NV EH
Sbjct: 408 PDFSKNPMKKLVQVQVGSLVSLDCKPRASP------RARSFWKKGDMNVQEH 453
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++++ + Y + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTKM-----EHHYKLNGGNLLV--INPNRNWDAGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLD-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHG-----------MD 168
+++ + + + RR + E G+L IS V D G Y+C T++ M
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLML 216
Query: 169 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
S G ++ + P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDG-VMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKL 275
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 276 RKFN--------GVLEIANFQQEDAGSYECIAENSRGK 305
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN 141
+L P F K P S G E +T+ C P P + W+ +G+ I + N
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTKMEHHYKLN 80
Query: 142 GN--LLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
G L+I+P D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLLVINPNRNWDAGTYQCFATNSLGTIVSREAKLQFAYLDNFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 168/467 (35%), Gaps = 48/467 (10%)
Query: 38 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 97
E + ++D L I + + D Y C A+NQ + L V+T P
Sbjct: 452 EHERITLLKDGGLKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNM 509
Query: 98 ETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFE------NGNLLISPV 149
+ GE +V + C + P F W +G + FE +G+L+I +
Sbjct: 510 DVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNI 567
Query: 150 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 209
SG Y C S LIV P E + ++ QL T+
Sbjct: 568 QLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--RVDEITDTTAQLSWKEGTDNH 625
Query: 210 LDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG 265
V I +G + + P + IDG T EYE V + +G
Sbjct: 626 SPVISYSIQARTPFSVGWQTITTV--PEV-IDGKTHTATVVELNPWVEYEFRVVASNKIG 682
Query: 266 ---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYK 313
K+ T+ V P + GG ++ I W + NG Y
Sbjct: 683 GGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPEELQNGEGF-GYV 737
Query: 314 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373
+ R +TW + V + RY R E+ +VP+S YE KV N G G P
Sbjct: 738 VAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKVGVYNNKGEG-PF 789
Query: 374 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 433
SP + ++P APS++ ++ +SW +P + N + Y++ + E
Sbjct: 790 SPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNSGGKE 849
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
S +K GN A R+ Y V+A N G GP S V
Sbjct: 850 ESSSKVKVAGNETSA--RLLGLKSNLAYYTAVRAYNSAGAGPFSATV 894
>gi|348514832|ref|XP_003444944.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
Length = 1003
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 248/481 (51%), Gaps = 21/481 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C+A G P +Y W +NGE L+ P+ED R + + VLTI LN D M+QC
Sbjct: 311 LVWECKASGKPKPSYRWLKNGEPLD----PMED--RVQVNNGVLTISSLN-LADIGMFQC 363
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ +++A+LRV+ + P F + L+++T A +GG+V I C P+ +P+ W+K
Sbjct: 364 VAENKHGRIFTNAELRVVAIAPDFSQNLLKAQTLARQGGDVLIECKPKMSPRGMISWRKG 423
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ R + +NG+L IS VS+ D+G+Y+C A N G+ S G L+V +
Sbjct: 424 KEALRESHRVMVLDNGSLRISNVSKTDAGMYTCVARNQFGVASSAGSLLVKEA-TVITSP 482
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLE 244
+ + ++ L C + LD+ + W N + G+ + DG ++
Sbjct: 483 AGHLDVTVGESIVLPCQVSHDPTLDLKFTWFFNEQLIHFGSHGAYFEKVGGQRSDGDIM- 541
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N AG+Y C V++ V +S T V+V GPPG P QV ++ +T+A++ W G+
Sbjct: 542 IRNIQLRHAGKYTCAVQTKVDSVSIATDVVVRGPPGPPVDCQVTKMTETTASLSWGPGSD 601
Query: 305 NGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI Y I ART ++ W V+ ++G G++ ++ L W YEF+V+
Sbjct: 602 NHSPILSYTIQARTPFSLGWQAVTTVPELLG-------GKQLSATVTDLSSWVDYEFRVL 654
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+R+ GGGG +L I+WEP+P E Q+ P Y
Sbjct: 655 ATNSIGTGEPSKPSKKARTKDTLPRVTPARVSGGGGGRSELVITWEPVPEEMQSGPGFGY 714
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + + + V + S ++ Y+VKV N+ G GP S V TI
Sbjct: 715 VVAFRPLGAQGWMQAAVTS-PDASRYVFKNESIPPFSPYQVKVGVYNNKGEGPFSPVTTI 773
Query: 483 W 483
+
Sbjct: 774 Y 774
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 135/328 (41%), Gaps = 34/328 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+++ ++ ++CEA G P Y W LN + RY + L I +LN E D
Sbjct: 17 ESRREVVFSCEAQGHPPPFYRW-----KLNDSFITPRPGSRYSLMGGNLHIAHLNKEEDV 71
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP 119
+YQC A N T S A L V L+ +FK + S EG V + C P + +
Sbjct: 72 GIYQCMASNSFGTIVSREASLHVAYLE-NFKTQ-RRSPVRVREGQGVVLLCGPPPHSGEL 129
Query: 120 KFVW---KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG---- 172
F W + +I R + GNL I+ V D G Y+C TN +G
Sbjct: 130 SFTWIFNEHPSYVIQDTRRFVSQKTGNLYIAKVEPSDVGNYTCVVTNTVTKSSVEGPPTP 189
Query: 173 ---RLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
R+ + G P Q P + +A ++L C A + +++ +
Sbjct: 190 LVLRVDGVMGEYEPKIEVQFPEVVPVAKSSTVKLECFALGNPVPTISWKKVDGASFTRKV 249
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D+N+ G+LEI DAG YECV +++ GK S K + P Q
Sbjct: 250 DINKAS--------GVLEIPYFQQEDAGMYECVAENSRGKNSVKGKLSYYAAPHFTEKPQ 301
Query: 287 VVEVHKT-SATIQWTDGATNGRPITHYK 313
+V KT T+ W A+ G+P Y+
Sbjct: 302 --DVQKTIDETLVWECKAS-GKPKPSYR 326
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 186/507 (36%), Gaps = 65/507 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
D+ C+ P SW + E L + R + DN ++R N + D MY
Sbjct: 403 DVLIECKPKMSPRGMISWRKGKEAL-------RESHRVMVLDNG-SLRISNVSKTDAGMY 454
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-----GGNVTIFCNPEAAPKP 119
C A+NQ S+ L V K + AG G ++ + C P
Sbjct: 455 TCVARNQFGVASSAGSLLV--------KEATVITSPAGHLDVTVGESIVLPCQVSHDPTL 506
Query: 120 --KFVWKKDGNIIGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDES 170
KF W + +I G FE +G+++I + +G Y+C A S
Sbjct: 507 DLKFTWFFNEQLIHFGSHGAYFEKVGGQRSDGDIMIRNIQLRHAGKYTC-AVQTKVDSVS 565
Query: 171 KGRLIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+V+ GP PP ++T L ++ + +T ++
Sbjct: 566 IATDVVVRGPPG----PPVDCQVTKMTETTASLSWGPGSDNHSPILS-YTIQARTPFSLG 620
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKST--VG-----KISTKTTVIVEGPPG 280
+ T + G L T + +YE V +T +G K S K P
Sbjct: 621 WQAVTTVPELLGGKQLSATVTDLSSWVDYEFRVLATNSIGTGEPSKPSKKARTKDTLPRV 680
Query: 281 LPGGVQVVEVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
P V ++ I W P Y + R W + V + R
Sbjct: 681 TPARVSGGGGGRSELVITWEPVPEEMQSGPGFGYVVAFRPLGAQGWMQAA--VTSPDASR 738
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
Y + E+ + P+S Y+ KV N G G P SP + ++P +AP R+
Sbjct: 739 YVFKNES-----IPPFSPYQVKVGVYNNKGEG-PFSPVTTIYSAEEEPSRAPGRLRARSV 792
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRI--PSE 455
++ ++W+PLP + Y++ +W +K E + ++ GN ++R S
Sbjct: 793 SASEVEVTWKPLPWSNNRRRILGYELQYWSEKQKQE-AATVIRTAGNKTSVLIRDLEGSS 851
Query: 456 FYYTEYEVKVQAINDVGPGPESEVVTI 482
YY V ++A N G GP+S +V +
Sbjct: 852 TYY----VCLRAYNSAGVGPQSNIVNV 874
>gi|395815721|ref|XP_003781372.1| PREDICTED: contactin-5 [Otolemur garnettii]
Length = 1110
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 230/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG P Q R + + VL I +N + D
Sbjct: 411 LDSGSPLRWECKATGKPRPTYRWLKNGA-------PYSPQSRVEMVNGVLMIHSVN-QSD 462
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ +G V I C P+ +PKP
Sbjct: 463 AGMYQCLAENKYGAIYASAELKILASAPTFPLNHLKKTIIVTKGREVVIECKPQGSPKPI 522
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C N+ G E + V P
Sbjct: 523 ISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENIFGSAEIIASVSVKE-P 581
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I D E
Sbjct: 582 TKIELTPKRTELTVGESVVLSCKAIHDSSLDVTFYWTLKGQPIDFEKDGGHFENIRAQAS 641
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 642 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 701
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 702 SPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVEYEF 756
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 757 RVVATNPIGTGDPSTPSRVIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 816
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 817 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 875
Query: 480 VTI 482
V I
Sbjct: 876 VVI 878
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 108/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 124 SDEKKVALNCEVRGNPIPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 178
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N + S +F R S EG V + C+P +P+
Sbjct: 179 GHYQCLATNSFGSVLSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 237
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 238 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 297
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 298 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKAR 356
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 357 LRKSQ--------AVLEIPNVQLDDAGFYECRAENSRGKNSFR 391
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 102/275 (37%), Gaps = 24/275 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 234 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 289
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 290 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 349
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+G Y C A N G + +G+L V P + E+L
Sbjct: 350 YIPSKARLRK-SQAVLEIPNVQLDDAGFYECRAENSRGKNSFRGQLQVYTYPHWLEKL-N 407
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NG E+ +N G+L I +
Sbjct: 408 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGAPYSPQSRVEM----VN---GVLMIHSV 458
Query: 249 SFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 282
+ +DAG Y+C+ ++ G I + I+ P P
Sbjct: 459 NQSDAGMYQCLAENKYGAIYASAELKILASAPTFP 493
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 182/498 (36%), Gaps = 61/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ G P SW + + + E++ + D ++R LN + D Y CR +
Sbjct: 513 CKPQGSPKPIISWKKGDKAVR------ENKRIAILPDG--SLRILNASKSDEGKYVCRGE 564
Query: 70 NQLKTRYSSAQLRVLTLKPS-FKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVWKKD 126
N + A + V +P+ + P +E GE +V + C +++ F W
Sbjct: 565 NIFGSAEIIASVSVK--EPTKIELTPKRTELTVGE--SVVLSCKAIHDSSLDVTFYWTLK 620
Query: 127 GNIIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
G I FEN +L+I + +G Y C + L+V
Sbjct: 621 GQPIDFEKDGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGP 680
Query: 180 PSYYEQLPPKITIA-----AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
P PP + I + L +A + + + +G + + P
Sbjct: 681 PG-----PPGVVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTVKTV--P 733
Query: 235 NINIDGGLLEITNASFADAGEYECVVKST----VGKISTKTTVIVEG---PPGLPGGVQV 287
I I G + EYE V +T G ST + VI P P V
Sbjct: 734 EI-ITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRVIRTNEAVPKTAPTNVSG 792
Query: 288 VEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
+ I W ++ NG Y + R N W + V E ++ R E
Sbjct: 793 RSGRRHELVIAWEPVSEEFQNGEGF-GYIVAFRPNGTRGWKE--KMVTSSEASKFIYRDE 849
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ + P + +E KV N G G P S + +P AP+ + G + ++
Sbjct: 850 S-----VPPLTPFEVKVGVYNNKGDG-PFSQIVVICSAEGEPSAAPTDVKATGVSVSEIL 903
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN-VGIAVVRIPSEFYYTEYEV 463
++W+ + +E P + +W K + E +ET+K GN I + + T Y +
Sbjct: 904 VAWKHV-KESLGRPQGFEVGYW-KDTEQEDSAETVKTRGNDSSIILTGLEGN---TRYHL 958
Query: 464 KVQAINDVGPGPESEVVT 481
V+A N G GP S V+
Sbjct: 959 TVRAYNGAGYGPPSGQVS 976
>gi|444727037|gb|ELW67545.1| Contactin-3 [Tupaia chinensis]
Length = 996
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 245/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NGE L E +R I++ +TI LN D M+Q
Sbjct: 334 NLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGAITISNLN-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R ++G L I+ V++ D+G Y+CTA N G L+V P+
Sbjct: 446 GEVAVQEHERITFLKDGGLKIANVTKADTGSYTCTAENQFGKANGTTLLVVTE-PTKITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG + + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALTDFKKEGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGTD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D GR + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPETID---GRTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ Y+VKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSPYQVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P + S V L
Sbjct: 798 AEEEPTIAPSQVSANSL 814
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S +++ F NG L I +DD+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKQRKF-NGVLEIPNFQQDDAGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G + I+N + D+G ++C+ ++ G + S + V+
Sbjct: 355 GEA---LVLEE----RIQIENGAITISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 112/280 (40%), Gaps = 40/280 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++ + + Y + L + NP R D Y
Sbjct: 46 VTLNCEARGNPSPHYRWQLNGSDID-----MSLEHHYKLNGGNLVV--FNPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+++ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTVTNTRVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN---GVRIGNM 226
G P Q P + A ++L C A + + + + +I
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKQR 276
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
N G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFN-----------GVLEIPNFQQDDAGSYECIAENSRGK 305
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 180/498 (36%), Gaps = 62/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + GE+ +++ +R F++D L I + + D Y C A+
Sbjct: 431 CKPRASPRALSSW-KKGEVA------VQEHERITFLKDGGLKIANVT-KADTGSYTCTAE 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG 127
NQ + + L V+T P + GE +V + C + P F W +G
Sbjct: 483 NQFG-KANGTTLLVVTEPTKITLAPSNMDVSVGE--SVILPCQVQHDPLLDIMFTWYFNG 539
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 540 ALTDFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINID 239
E + K+ QL T+ V I +G + T ID
Sbjct: 600 PPENV--KVDEITDTTAQLSWKEGTDNHSPVISYSIQARTPFSVG---WQTVTTVPETID 654
Query: 240 GGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVV 288
G T EYE V + +G K+ T+ V P + GG
Sbjct: 655 GRTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG-- 712
Query: 289 EVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
++ I W + NG + ++ + TNW + V + RY R
Sbjct: 713 --SRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFR 764
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E+ ++P+S Y+ KV N G G P SP + ++P APS++ +
Sbjct: 765 NES-----IMPFSPYQVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANSLSSSE 818
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SW +P + N + Y++ + E S +K GN R+ Y
Sbjct: 819 IKVSWNTIPWKLSNGHLLGYEVRYWNDGGEEESSNKVKVAGNE--TSTRLQGLKSNLAYY 876
Query: 463 VKVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 877 TAVRAYNSAGAGPFSATV 894
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E VT+ C P P + W+ +G+ I S
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKVTLNCEARGNPSPHYRWQLNGSDIDMSLEHHYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVFNPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCSA--HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVESSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>gi|296216730|ref|XP_002754694.1| PREDICTED: contactin-5 isoform 1 [Callithrix jacchus]
gi|296216732|ref|XP_002754695.1| PREDICTED: contactin-5 isoform 2 [Callithrix jacchus]
Length = 1100
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +P Q R + + +L I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPFSPQSRVEMVNGLLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILAAAPTFALNQLKKTIIVTKDQEVVIECTPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C N+ G E L+ + P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENIFGSAEIIA-LLSVKEP 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNLIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 110/282 (39%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 115 DEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 169
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N L + S +F R S EG V + C+P +P+ +
Sbjct: 170 HYQCLATNTLGSILSKEATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 228
Query: 122 VW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I ++ GNL IS V D G Y C T TN +
Sbjct: 229 SWVFNEFPSFVAEDSRRFISQDTGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 288
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 289 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKARL 347
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 348 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 102/272 (37%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ QD D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQDTGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + + GLL I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPFSPQS-------RVEMVNGLLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILAAAP 480
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K A+V +P Y ++V+A ++ G
Sbjct: 1002 NESDVVGYKVFYRQEGHSNSQVIETQKLQ-----AIVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
>gi|426224671|ref|XP_004006492.1| PREDICTED: contactin-1 isoform 1 [Ovis aries]
gi|426224673|ref|XP_004006493.1| PREDICTED: contactin-1 isoform 2 [Ovis aries]
Length = 1018
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 243/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+W K + + R I+E+G+L I+ ++R D G+Y+C N G S G L++ P
Sbjct: 446 FLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ +V TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDVRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 680 RVVATNTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENNRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHRGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 106/495 (21%), Positives = 178/495 (35%), Gaps = 59/495 (11%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P + W + E L+NS + +D L I + D +Y C +
Sbjct: 436 CKPKAAPKPKFLWSKGTERLVNSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N K + +S V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NN-KGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDVRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
EYE V +T+G KI T P + GG
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----S 719
Query: 292 KTSATIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
TI W N I +K W V + RY + E
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKV------TVTNPDTGRYVHKDE- 772
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P + ++ KV A N G G P S + ++ D P +AP+ +G ++S+
Sbjct: 773 ----TMRPSTAFQVKVKAFNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISV 827
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
WE + + + I Y K+ +EY R+ + T+Y V+V
Sbjct: 828 HWEHVVEKIVESYQIRYWASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYFVEV 881
Query: 466 QAINDVGPGPESEVV 480
+A N G GP S+++
Sbjct: 882 RACNSAGCGPPSDMI 896
>gi|426224675|ref|XP_004006494.1| PREDICTED: contactin-1 isoform 3 [Ovis aries]
Length = 1007
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 243/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 331 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------------VTFENA--- 375
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 376 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 434
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+W K + + R I+E+G+L I+ ++R D G+Y+C N G S G L++ P
Sbjct: 435 FLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITD-P 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 494 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ +V TS + W
Sbjct: 554 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDVRATSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 669 RVVATNTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 729 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 787
Query: 480 VTI 482
I
Sbjct: 788 AVI 790
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 30 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 89 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 239
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 210
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 211 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 270
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N G D+ + R+ V P +
Sbjct: 271 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENNRGKDKHQARIYVQAFPEW 322
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 323 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHRGE 364
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 365 LRLYDVTFENAGMYQCIAENTHGAI 389
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 47 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 98
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 99 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 155
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 156 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 215
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 216 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 266
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 267 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI 326
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 327 NDTEV-DIGSDLYWPCVAT-GKPI 348
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 186/498 (37%), Gaps = 65/498 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P + W + E L+NS + +D L I + D +Y C +
Sbjct: 425 CKPKAAPKPKFLWSKGTERLVNSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N K + +S V+T P+ ++ GE + + + A FVW +G +
Sbjct: 477 NN-KGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 535
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 596 PGGL--RIEDVRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 652
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
EYE V +T+G KI T P + GG
Sbjct: 653 EAARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----S 708
Query: 292 KTSATIQWTDGATNGRPIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGR 342
TI W P++ HY I+A ++ W V+ V + RY +
Sbjct: 709 NRELTITWA-------PLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHK 759
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E + P + ++ KV A N G G P S + ++ D P +AP+ +G +
Sbjct: 760 DET-----MRPSTAFQVKVKAFNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSE 813
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+S+ WE + + + I Y K+ +EY R+ + T+Y
Sbjct: 814 ISVHWEHVVEKIVESYQIRYWASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYF 867
Query: 463 VKVQAINDVGPGPESEVV 480
V+V+A N G GP S+++
Sbjct: 868 VEVRACNSAGCGPPSDMI 885
>gi|395516504|ref|XP_003762427.1| PREDICTED: contactin-6 [Sarcophilus harrisii]
Length = 1017
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 233/481 (48%), Gaps = 23/481 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NGE P+ ++R I++ L I LN D YQC
Sbjct: 324 LFWECRASGKPIPSYVWLKNGE-------PIVPEERIQIENGSLVITMLNVS-DSGFYQC 375
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ +T Y++A+LRV P F K P++ + GG+V I C P+A+P+ W K
Sbjct: 376 VAENKYQTIYANAELRVRASAPDFSKNPMQKISVVQVGGDVVIECKPKASPRAMISWAKG 435
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+I R I E+G+L I V++ D+G Y+C A N G+ ++ G L++ +
Sbjct: 436 SEMIRQSKRFFILEDGSLKIYNVTKLDAGTYTCIAMNQFGIAKTSGNLVIKER-TIITVP 494
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL---- 242
PP++ + ++ L C + ++V + W N GN+ + P+ GG
Sbjct: 495 PPQMDVTVGESIVLPCQVFHDPSIEVVFTWYLN----GNVIDFQRGVPHFERIGGESVGD 550
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I +G+Y C+V++T+ +S +IV GPPG P V++ + T++ + W G
Sbjct: 551 LMIREIQLNHSGKYVCMVETTLDNLSAVADIIVRGPPGPPSNVRIENISSTTSQLCWRPG 610
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI Y I RT ++ W VS + G+ + L PW YEF+V+
Sbjct: 611 IDNNSPIQIYTIQTRTPFSVGWLAVSTI-----PEILNGKMHTATVVGLNPWVEYEFRVV 665
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP+ IGGGGG +L I+WE +P E QN Y
Sbjct: 666 AGNSIGIGEPSQPSKLLRTKAAVPVVAPTTIGGGGGSQSELVITWESIPEELQNGEGFGY 725
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R + ++ V R S + +EVKV N+ G G S +
Sbjct: 726 IIMFRPVGSLTWTKASVSSV-EASKYVYRNESLIPLSPFEVKVGVYNNEGEGTLSPATIV 784
Query: 483 W 483
+
Sbjct: 785 Y 785
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 187/501 (37%), Gaps = 52/501 (10%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAM 63
D+ C+ P SW + E++ R+FI +D L I Y + D
Sbjct: 414 GDVVIECKPKASPRAMISWAKGSEMI-------RQSKRFFILEDGSLKI-YNVTKLDAGT 465
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--F 121
Y C A NQ +S L V+ + P + + GE ++ + C P + F
Sbjct: 466 YTCIAMNQFGIAKTSGNL-VIKERTIITVPPPQMDVTVGE--SIVLPCQVFHDPSIEVVF 522
Query: 122 VWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W +GN+I FE G+L+I + + SG Y C + +I
Sbjct: 523 TWYLNGNVIDFQRGVPHFERIGGESVGDLMIREIQLNHSGKYVCMVETTLDNLSAVADII 582
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
V P + + + L R + + I T +G + ++ + P
Sbjct: 583 VRGPPGPPSNVRIENISSTTSQLCWRPGIDNNSPIQIYTIQTRTPFSVGWLAVSTI--PE 640
Query: 236 INIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGG 284
I ++G + T EYE V +++G + TK V V P + GG
Sbjct: 641 I-LNGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSQPSKLLRTKAAVPVVAPTTIGGG 699
Query: 285 VQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
++ I W + NG Y I+ R + TW S V E +Y
Sbjct: 700 GG----SQSELVITWESIPEELQNGEGF-GYIIMFRPVGSLTWTKAS--VSSVEASKYVY 752
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
R E+ L+P S +E KV N G G SP+ + D+P AP+
Sbjct: 753 RNES-----LIPLSPFEVKVGVYNNEGEGT-LSPATIVYSGEDEPQLAPTGASVQSFSAS 806
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++ ISW + + + Y++ + ++ E S ++ GN I I T Y
Sbjct: 807 EVDISWNSIAWNRSTGRVLGYEVLYWTEDSKETSSGKIRVSGN--ITTKSITGLKANTLY 864
Query: 462 EVKVQAINDVGPGPESEVVTI 482
V+A N G GP S++V +
Sbjct: 865 FATVRAYNTAGTGPSSDLVNV 885
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 125/330 (37%), Gaps = 44/330 (13%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+++ C A G P Y W +NG ++ Y + L I NP + A+
Sbjct: 32 HSEVILNCAANGYPIPNYRWKQNGTDID-----FTMSYHYRLIGGSLAIS--NPYKAQAI 84
Query: 64 --YQCRAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
YQC A N L T S A+L+ ++ K AG+G V + C P P
Sbjct: 85 GTYQCLATNPLGTILSQKAKLQFAYIENFETKTRSTVSVLAGQG--VVLLC----GPPPF 138
Query: 121 F-----VWKKDGNI--IGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
F W + + + RR I E GNL I+ V D G Y+C TN+ +G
Sbjct: 139 FGDVYYAWTFNDHPLPVQEDSRRFISQETGNLYIAKVEPSDVGNYTCFVTNMQAQKRIQG 198
Query: 173 --RLIVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
+VL + PKI + A ++L C A + ++++
Sbjct: 199 PPTPLVLRNDGVMGEYEPKIEVRFPETVQAAKGSTVKLECFALGNPVPNISWRRLDGSPL 258
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 282
++ ++ G + I N D G YEC+ + G+ + + + PP
Sbjct: 259 ARKIEYSK--------SKGTIGIPNFQQEDEGSYECIAGNLRGRNIARGQLFLYAPPEWD 310
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHY 312
+Q ++ W A+ G+PI Y
Sbjct: 311 KKIQTTDLSIYDPLF-WECRAS-GKPIPSY 338
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 18/198 (9%)
Query: 88 PSFKKRPLE-SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG---SGGRRKIFENGN 143
PSF + P + + E V + C P P + WK++G I S R I G+
Sbjct: 15 PSFTQEPQDIMYSLNMEHSEVILNCAANGYPIPNYRWKQNGTDIDFTMSYHYRLI--GGS 72
Query: 144 LLIS-PVSRDDSGIYSCTATNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 201
L IS P G Y C ATN G + K +L + ++ + +++ A + + L
Sbjct: 73 LAISNPYKAQAIGTYQCLATNPLGTILSQKAKLQFAYIENFETKTRSTVSVLAGQGVVLL 132
Query: 202 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
C DV Y WT N + + E I+ + G L I +D G Y C V
Sbjct: 133 C-GPPPFFGDVYYAWTFND---HPLPVQEDSRRFISQETGNLYIAKVEPSDVGNYTCFVT 188
Query: 262 STVGKISTKTTVIVEGPP 279
+ + ++GPP
Sbjct: 189 NMQAQKR------IQGPP 200
>gi|397489669|ref|XP_003815845.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Pan paniscus]
Length = 1028
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 243/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + +G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++ + + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDID-----MSMEHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCXPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFS--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 180/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R + D L I + + D Y C A+
Sbjct: 431 CKPRASPRARSSW-KKGDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAE 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 483 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 539
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 540 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 600 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 656
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 712
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 713 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 767
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 768 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 823
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + E S +K GN A +R + S YYT V
Sbjct: 824 NTIPWKLSNGHLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AV 879
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 880 RAYNSAGTGPFSATVNV 896
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCXPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
>gi|410920629|ref|XP_003973786.1| PREDICTED: contactin-4-like [Takifugu rubripes]
Length = 1022
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 230/479 (48%), Gaps = 16/479 (3%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
A L W C+A G P TY W +NG++L +E R I LTI ++ D MY
Sbjct: 334 AGLQWECKAMGNPRPTYKWLKNGQMLTAE-------GRARIDAGKLTISRIS-LLDSGMY 385
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A+N+ + Y+SA+L+V+ P F RP++ T GG + C P A+P+ W
Sbjct: 386 QCVAQNEHGSIYASAELKVVASPPDFTLRPVKKSTVVQRGGEAVLECRPRASPRAAISWW 445
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ G ++ R+ I ++G L I+ +S+ D+G Y+C A N G S G L+V P+
Sbjct: 446 RGGQLLMDAERQTIMDDGTLRITNISKADAGRYTCVARNHFGSSSSTGTLVVKE-PTRIT 504
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P + + ++L L C ++ L+ + W NG I E G L+
Sbjct: 505 VPPLSLDVTTGQSLVLPCEVSSDSSLNPKFKWFFNGKAIDFSRQEHFEMIGKGFAGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
+ N +G+Y C+V + V +S + V GPPG P G+ V + ++ + W G
Sbjct: 564 VRNIQLKHSGKYVCMVHTEVDTVSAAAELTVRGPPGAPEGLAVTHITDSTVQLSWGSGPD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+T Y + ART ++ W + D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVTMYMVQARTPFSIGW-----QTVATVPDSVPGQMMHATVKGLNPWVDYEFRVVAI 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N +G GEPS+ + Q T A P AP + GGGG G+L I+WEP+ E Q + Y +
Sbjct: 679 NSVGVGEPSTRTKQIRTKAAVPKVAPVSVSGGGGARGELVITWEPVSEEHQGGEDFGYVM 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R + + +T+ + + + T++EVKV N G G S VV ++
Sbjct: 739 AFRPVGSSTW-IQTVVASPEASRYIYKDDNIAPLTQFEVKVGVYNSNGEGQFSHVVRVF 796
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 108/275 (39%), Gaps = 29/275 (10%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQL--KT 74
++ YSW NG+ L+ R FI + E D Y C +N + T
Sbjct: 151 EIKYSWVFNGQRSF-----LQQDARRFISQRTGDLYIAKVEASDVGNYTCAVRNMMTNAT 205
Query: 75 RYSSAQLRVLTLKPSFKKRPLESETY------AGEGGNVTIFCNPEAAPKPKFVWKK-DG 127
+SS V+ + + E +G +V + C P P W++ DG
Sbjct: 206 VFSSPAPVVVRRDAVMGEYEPKIEVQFPDALRVSKGSSVKLECFALGNPVPSISWRRADG 265
Query: 128 NIIGSGGRRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMDESKGRLIVLHGPS-YYEQ 185
N + G+ KI + +L P R +D+G+Y C A N G + ++G+L+ + ++
Sbjct: 266 NPLP--GKIKINHSAGVLEIPYFRPEDAGVYECVAENSRGRNVARGQLLFQNVEHLHWLH 323
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
IA LQ C A Y W NG + ID G L I
Sbjct: 324 TLRDADIAIDAGLQWECKAMGNP--RPTYKWLKNGQML-------TAEGRARIDAGKLTI 374
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
+ S D+G Y+CV ++ G I + +V PP
Sbjct: 375 SRISLLDSGMYQCVAQNEHGSIYASAELKVVASPP 409
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 32/272 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE--RDPAMYQCRA 68
C A G P Y W NG + +E+ P + ++ N+L NP +YQC A
Sbjct: 49 CRAKGNPPPHYRWTVNGRAITAESGP----NYSLVEGNLLIT---NPHVVNHRGVYQCIA 101
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG 127
N T S +F +P + + EG V + C P + K+ W +G
Sbjct: 102 TNTFGTIVSREAKVEFAFLENFSGKPRNTVSVR-EGQAVVLLCGPPLHYGEIKYSWVFNG 160
Query: 128 --NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHG---MDESKGRLIVL---- 177
+ + RR I + G+L I+ V D G Y+C N+ + S ++V
Sbjct: 161 QRSFLQQDARRFISQRTGDLYIAKVEASDVGNYTCAVRNMMTNATVFSSPAPVVVRRDAV 220
Query: 178 ---HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
+ P Q P + ++ +++L C A + +++ G + +N
Sbjct: 221 MGEYEPKIEVQFPDALRVSKGSSVKLECFALGNPVPSISWRRADGNPLPGKIKINH---- 276
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGK 266
G+LEI DAG YECV +++ G+
Sbjct: 277 ----SAGVLEIPYFRPEDAGVYECVAENSRGR 304
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 181/496 (36%), Gaps = 56/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C P SW+R G+LL D +R I D+ T+R N + D Y C A+
Sbjct: 432 CRPRASPRAAISWWRGGQLL-------MDAERQTIMDDG-TLRITNISKADAGRYTCVAR 483
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + S+ L V+ PL + G+ + + +++ PKF W +G
Sbjct: 484 NHFGSSSSTGTL-VVKEPTRITVPPLSLDVTTGQSLVLPCEVSSDSSLNPKFKWFFNGKA 542
Query: 130 IGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I R++ FE G+L++ + SG Y C + L V P
Sbjct: 543 I-DFSRQEHFEMIGKGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAAELTVRGPPGAP 601
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E L +T +QL + + V ++ + T ++ G ++
Sbjct: 602 EGL--AVTHITDSTVQLSWGSGPDNHSPVTMYMVQARTPF-SIGWQTVATVPDSVPGQMM 658
Query: 244 EITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHK 292
T +YE V ++VG +I TK V P + GG +
Sbjct: 659 HATVKGLNPWVDYEFRVVAINSVGVGEPSTRTKQIRTKAAVPKVAPVSVSGGGGA----R 714
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
I W G Y + R +STW + V E RY + ++
Sbjct: 715 GELVITWEPVSEEHQGGEDFGYVMAFRPVGSSTW--IQTVVASPEASRYIYK-----DDN 767
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
+ P + +E KV N G G+ S ++ ++P +APS + ++ + W+ +
Sbjct: 768 IAPLTQFEVKVGVYNSNGEGQFSHVVRVFSA-EEEPSEAPSSVWARAASASEIEVHWKRI 826
Query: 411 PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGI--AVVRIPSEFYY-TEYEVKVQ 466
P + Y+I FW + E G V I A + S T Y++ V+
Sbjct: 827 PPGSSRGKILAYEILFWEDGSRP-------SEAGRVRIISATTALLSGLKANTAYQISVR 879
Query: 467 AINDVGPGPESEVVTI 482
A N G GP S +
Sbjct: 880 AQNSAGFGPGSAAFIV 895
>gi|114587894|ref|XP_526232.2| PREDICTED: contactin-3 isoform 3 [Pan troglodytes]
gi|410212392|gb|JAA03415.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
gi|410251446|gb|JAA13690.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
gi|410291610|gb|JAA24405.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
gi|410329979|gb|JAA33936.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
Length = 1028
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 243/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + +G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++ + + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDID-----MSMEHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFS--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 180/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R + D L I + + D Y C A+
Sbjct: 431 CKPRASPRARSSW-KKGDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAE 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 483 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 539
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 540 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 600 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 656
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 712
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 713 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 767
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 768 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 823
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + E S +K GN A +R + S YYT V
Sbjct: 824 NTIPWKLSNGHLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AV 879
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 880 RAYNSAGAGPFSATVNV 896
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
>gi|410920631|ref|XP_003973787.1| PREDICTED: contactin-4-like [Takifugu rubripes]
Length = 1035
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 231/483 (47%), Gaps = 23/483 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P +Y W +NGE L ++R + + L+I L D MYQ
Sbjct: 342 SLVWECKATGKPKPSYRWMKNGENLE------PSEERIQVANGALSISRLT-LSDTGMYQ 394
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ YS+A+LRV+ + P F + L+S+T GG+ I C P+ +P W+K
Sbjct: 395 CVAGNKHGEAYSNAELRVIAVAPDFSQNQLKSQTLVKAGGDALIECKPKMSPWGVVSWRK 454
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ + R I NG+L I ++ D+G+Y+C A N G+ S G L V P+
Sbjct: 455 GSDPLRESNRISILANGSLRIWNATKSDAGLYTCIARNQFGVASSTGTLSVKE-PTIITT 513
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLL 243
P + + ++ L C + L++ + W N + G+ E G +
Sbjct: 514 PPSTLDVTVGESMVLPCQVSHDPSLELKFTWFFNEQLIHFGSHG-GFFEKVGGQHSAGDI 572
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N AG+Y C V++ V IS +IV GPPG P V V E+ T+A++ W G
Sbjct: 573 MIRNIQLRHAGKYTCAVQTKVDSISIALDLIVRGPPGPPTSVHVEEIIDTTASLSWRPGP 632
Query: 304 TNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
N PIT Y I ART ++ W V+ E V G ++ A++ L PW YEF+
Sbjct: 633 DNHSPITAYTIQARTPFSLGWQAVTTVPEVVAGHQL-------RATVTE-LSPWVEYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N +G GEPS PS Q T P P+ + GGGG +L I+WEP+P E QN P
Sbjct: 685 VLASNTIGTGEPSKPSKQARTKGTYPKVTPANVSGGGGSRSELVITWEPVPEEFQNGPGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R T + + V + S ++ + VKV N+ G GP V
Sbjct: 745 GYVVAFRPHGATGWMQAAVPT-AEASRYVFKNESIQPFSPFHVKVGVYNNEGEGPFGPVT 803
Query: 481 TIW 483
TI+
Sbjct: 804 TIY 806
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 28/295 (9%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
++ ++ ++CEA G P +Y W NG ++S+ Y + L I LN ++D
Sbjct: 48 LERNKEVVFSCEAQGSPPPSYRWKLNGTEISSKY-----GSHYILSGGNLRISRLNKDQD 102
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP- 119
YQC A N T S +FK + S EG V + C P
Sbjct: 103 AGTYQCLASNSFGTIVSREASLTFAYLENFKTQ-RRSSVSVREGQGVVLLCGPPPHSGDL 161
Query: 120 --KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RL 174
+++ + + RR I E GNL I+ V D G Y+C TN +G
Sbjct: 162 VFSWIFNEYPTFVKQDTRRFISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTP 221
Query: 175 IVLHG--------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+VL P Q P + +A ++L C A + + N R+ +
Sbjct: 222 LVLRSDGVMGEYEPKIEVQFPEFVHVAKGSTVKLECFALGNPVPSI------NWRRVDGV 275
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
+ + G+LEI DAG YECV +++ G + K + PP L
Sbjct: 276 SFSR--KVDTRKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGKLSFYAPPQL 328
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 175/466 (37%), Gaps = 36/466 (7%)
Query: 36 PLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 94
PL + +R I N ++R N + D +Y C A+NQ S+ L V +P+ P
Sbjct: 458 PLRESNRISILANG-SLRIWNATKSDAGLYTCIARNQFGVASSTGTLSVK--EPTIITTP 514
Query: 95 LES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNLLI 146
+ + GE + + + + + KF W + +I G FE G+++I
Sbjct: 515 PSTLDVTVGESMVLPCQVSHDPSLELKFTWFFNEQLIHFGSHGGFFEKVGGQHSAGDIMI 574
Query: 147 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 206
+ +G Y+C LIV P + + I +L R
Sbjct: 575 RNIQLRHAGKYTCAVQTKVDSISIALDLIVRGPPGPPTSVHVEEIIDTTASLSWRPGPDN 634
Query: 207 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTV 264
+ I +G + + P + + G L T + EYE + +T+
Sbjct: 635 HSPITAYTIQARTPFSLGWQAVTTV--PEV-VAGHQLRATVTELSPWVEYEFRVLASNTI 691
Query: 265 G-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIA 316
G K S + P P V ++ I W + NG P Y +
Sbjct: 692 GTGEPSKPSKQARTKGTYPKVTPANVSGGGGSRSELVITWEPVPEEFQNG-PGFGYVVAF 750
Query: 317 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 376
R + + W + V E RY + E+ + P+S + KV N G G P P
Sbjct: 751 RPHGATGWMQAA--VPTAEASRYVFKNES-----IQPFSPFHVKVGVYNNEGEG-PFGPV 802
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 436
+ ++P +AP+R+ ++ +SW+ LP + +++ + +++ E +
Sbjct: 803 TTIYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWSVSKRRVLGFEVRYWSRSEKEDMA 862
Query: 437 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ GN V+R T Y + V+A N G GP S V +
Sbjct: 863 SVQRTVGNQTSTVIR--GVKGSTTYYISVRAYNTAGTGPPSNTVNV 906
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 29/261 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV-LTIRYLNPERDPAMYQCRAKNQL-KTR 75
D+ +SW N T +D R+ Q+ L I + P D Y C N + KTR
Sbjct: 160 DLVFSWIFN----EYPTFVKQDTRRFISQETGNLYIAKVEPS-DVGNYTCVVTNTVTKTR 214
Query: 76 Y----SSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LR + ++ + + +G V + C P P W++
Sbjct: 215 VQGPPTPLVLRSDGVMGEYEPKIEVQFPEFVHVAKGSTVKLECFALGNPVPSINWRR--- 271
Query: 129 IIGSGGRRKI---FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ G RK+ +G L I ++D+G Y C A N GM+ KG+L P E+
Sbjct: 272 VDGVSFSRKVDTRKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGKLSFYAPPQLIEK 331
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P + +L C A + +Y W NG N++ +E I + G L I
Sbjct: 332 -PRDVQKLIDDSLVWECKATGKP--KPSYRWMKNG---ENLEPSE---ERIQVANGALSI 382
Query: 246 TNASFADAGEYECVVKSTVGK 266
+ + +D G Y+CV + G+
Sbjct: 383 SRLTLSDTGMYQCVAGNKHGE 403
>gi|334347566|ref|XP_001377637.2| PREDICTED: contactin-1 [Monodelphis domestica]
Length = 1015
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 240/484 (49%), Gaps = 26/484 (5%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P T W RNG + L L DN
Sbjct: 332 DIGSDLYWPCVATGKPIPTIRWLRNGYAYHKGELRLYG----LTFDNA------------ 375
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L++L + P+F+ P++ +T A +GG V I C P+AAPKPKF
Sbjct: 376 GMYQCIAENAHGAIYANAELKILAMAPTFEMNPMKKKTLAAKGGRVLIECKPKAAPKPKF 435
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K + + R I+++G+L I ++R D G Y+C A N G + G L++
Sbjct: 436 SWSKGTEWLVNSTRILIWDDGSLEIRNITRADEGTYTCFAENNRGKANNTGTLLITDATR 495
Query: 182 YYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
LPP + N ++CSA + LD+ +IW+ NG I N N ID
Sbjct: 496 I--TLPPANADVTVGENATMQCSASHDPALDLTFIWSLNGYVIDFSKENSHYMRNFMIDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I A AG Y C ++ V S ++V GPPG PGGV++ ++ TS + W
Sbjct: 554 NGDLLIKKAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRIEDIRDTSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G E++ L+PW YEF
Sbjct: 614 SRGSDNHSPISKYSIQTKTILSDDWKDAKTDPSNIE-----GNMESARAVDLIPWMEYEF 668
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 669 RVVATNILGTGEPSLPSNRIKTEGAAPNVAPSDVGGGGGSNRELTITWVPLSREYHYGNN 728
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ E++ T+ ++G V + + TE++VKV+A N+ G GP S
Sbjct: 729 FGYIVAFKPFGGKEWKKVTVTN-PDIGRYVHKDETMSPSTEFQVKVKAFNNKGDGPFSLT 787
Query: 480 VTIW 483
I+
Sbjct: 788 AVIY 791
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 30 PIFEEQPIDT-IYPEESPDGKVSLNCRARASPFPVYKWRMNNWDIDLTNERYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
I +P D+G Y C +N++GM S + Y + PP ++ + L L
Sbjct: 89 INNPDKLRDAGKYFCLVSNIYGMVRSTEATLSF---GYLDPFPPEERAEVKVKEGIGLVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N I MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPIFITMDKRRY----VSQTNGNLYIANVEASDRGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + +++ +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPLSDRTTKLYPADIKVQFKD 239
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 187/499 (37%), Gaps = 63/499 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + + D D L IR + D Y C A+
Sbjct: 425 CKPKAAPKPKFSWSKGTEWLVNSTRILIWD-------DGSLEIRNIT-RADEGTYTCFAE 476
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L ++T P ++ GE + + + A F+W +G +
Sbjct: 477 NNRGKANNTGTL-LITDATRITLPPANADVTVGENATMQCSASHDPALDLTFIWSLNGYV 535
Query: 130 IGSGGRRK-------IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I I NG+LLI +G Y+CTA + + L+V P
Sbjct: 536 IDFSKENSHYMRNFMIDSNGDLLIKKAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 595
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ +I ++ L S ++ ++ + + D + +T NI+G +
Sbjct: 596 PGGV--RIEDIRDTSVALTWSRGSDNHSPISKYSIQTKTILSD-DWKDAKTDPSNIEGNM 652
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V T ++ G P LP ++ + + +D
Sbjct: 653 ESARAVDLIPWMEYEFRV--------VATNILGTGEPSLPS--NRIKTEGAAPNVAPSDV 702
Query: 302 --GATNGRPIT----------HYK-----IIARTNWNST-WFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A + W V+ V ++ RY +
Sbjct: 703 GGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFGGKEWKKVT--VTNPDIGRYVHKD 760
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + + D P +AP+ + ++
Sbjct: 761 E-----TMSPSTEFQVKVKAFNNKGDG-PFSLTAVIYSAQDAPSEAPTDVSIKVLSSSEI 814
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+SW+ + + I Y K+ + + ++Y ++ + +Y V
Sbjct: 815 SVSWKHVLEKTVEGYQIRYWAAQDKEAAAQRVQVSSQDYS------AKLENLLPDMQYSV 868
Query: 464 KVQAINDVGPGPESEVVTI 482
+V+A N G GP S+V+ +
Sbjct: 869 EVRAYNSAGYGPPSDVIDV 887
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 97/266 (36%), Gaps = 48/266 (18%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R ++ + N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPIFITMDKRRYVSQTNGNLYIANVEASDRGNYSCFVSSPSITKS 210
Query: 77 SSAQL--------RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
++ R L P+ K + +TYA G NVT+ C P P+ W+K
Sbjct: 211 VFSKFIPLIPLSDRTTKLYPADIKVQFK-DTYALMGHNVTLECFALGNPVPEIRWRKVLE 269
Query: 126 ----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG KIF + +D G Y C A N+ G D + R+ V P
Sbjct: 270 PMPSTAEISMSGAVLKIFN--------IQLEDEGTYECEAENIRGKDRHQARIYVQAFPE 321
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E + +L C A + + + W NG G
Sbjct: 322 WVEHI-NDTEADIGSDLYWPCVATGKPIPTIR--WLRNGYAYHK---------------G 363
Query: 242 LLEITNASFADAGEYECVVKSTVGKI 267
L + +F +AG Y+C+ ++ G I
Sbjct: 364 ELRLYGLTFDNAGMYQCIAENAHGAI 389
>gi|350584500|ref|XP_003355665.2| PREDICTED: contactin-1-like isoform 2 [Sus scrofa]
Length = 1018
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 243/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+W K + + R I+E+G+L I+ ++R+D G Y+C N G S G L++ P
Sbjct: 446 FLWSKGTERLVNSSRILIWEDGSLEINNITRNDGGTYTCFVENNKGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + + G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYNIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 680 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHRGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 184/497 (37%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P + W + E L+NS + +D L I + D Y C +
Sbjct: 436 CKPKAAPKPKFLWSKGTERLVNSSRI-------LIWEDGSLEINNIT-RNDGGTYTCFVE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N K + +S V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NN-KGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L + A L + + I T I + D + +T I+G +
Sbjct: 607 PGGLRIEDIRATSVALTWSRGSDNHSPISKYNIQTKT---ILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 664 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 713
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 714 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 771
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + ++ D P +AP+ +G ++
Sbjct: 772 ET-----MRPSTAFQVKVKAFNNKGDG-PYSLTAVIHSAQDAPSEAPTEVGVKVLSSSEI 825
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + + I Y K+ T +EY R+ + T+Y V
Sbjct: 826 SVHWEHVVEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------ARLENLLPDTQYFV 879
Query: 464 KVQAINDVGPGPESEVV 480
+V+A N G GP S+++
Sbjct: 880 EVRACNSAGCGPPSDMI 896
>gi|440892313|gb|ELR45556.1| Contactin-3, partial [Bos grunniens mutus]
Length = 877
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 239/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 183 SLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 234
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V + C P A+P+ WKK
Sbjct: 235 CIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSWKK 294
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R +G L I V++ D+GIY+C A N G L+V P+
Sbjct: 295 GEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTE-PTRITL 353
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LL + W NG D + E + G L+
Sbjct: 354 APSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLM- 412
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 413 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKEGTD 472
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 473 NHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 527
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 528 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 587
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S ++ YEVKV N+ G GP S V T++
Sbjct: 588 AFRPLGVTNW-IQTVVTSPDTPRYVFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVFS 646
Query: 484 --HDPLVIISYVCQGDL 498
+P + S V L
Sbjct: 647 AEEEPTIAPSQVSANSL 663
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 190/505 (37%), Gaps = 64/505 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++ C+ P SW + GE++ E ++ F+ D L I + + D +Y
Sbjct: 274 SEVNLDCKPRASPRALSSW-KKGEVIVQE-----NERTSFLNDGGLKIVNVT-KADAGIY 326
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFV 122
C A+NQ + L V+T P + GE +V + C + P F
Sbjct: 327 TCIAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLATMFT 383
Query: 123 WKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G + FE +G+L+I + SG Y C S LIV
Sbjct: 384 WYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIV 443
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETP 234
P E + K+ QL T+ V AY + +G + P
Sbjct: 444 RGSPGPPESV--KVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--P 499
Query: 235 NINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPG 283
+ IDG T EYE V + +G K+ T+ V P + G
Sbjct: 500 EV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSG 558
Query: 284 GVQVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
G ++ I W + NG + ++ + TNW + V +
Sbjct: 559 GGG----SRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTP 608
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
RY R E+ ++P+S YE KV N G G P SP + ++P APS++
Sbjct: 609 RYVFRNES-----ILPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTIAPSQVSANS 662
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF 456
++ +SW +P + N + Y++ + E S LK GNV A +R + S
Sbjct: 663 LSSSEIEVSWNAIPWKLSNGHLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNL 722
Query: 457 -YYTEYEVKVQAINDVGPGPESEVV 480
YYT V+A N G GP S V
Sbjct: 723 AYYT----AVRAFNSAGTGPFSATV 743
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 88 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-SGVLEIPNFQQEDSGSYEC 146
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 147 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 203
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 204 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 256
Query: 278 P 278
P
Sbjct: 257 P 257
>gi|403297272|ref|XP_003939499.1| PREDICTED: contactin-3 [Saimiri boliviensis boliviensis]
Length = 1028
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 244/497 (49%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 NLYWECRASGKPKPSYRWLKNGAALVLE-------ERIQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P WKK
Sbjct: 386 CIAENKHGLIYSSAELKVVASAPDFSKSPMKKLVQVQVGSLVSLDCKPRASPTAHSFWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVNVQEHERITLLKDGELKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVRVDEITDTTAQLSWKEGTD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W ++ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S+V L
Sbjct: 798 AEEEPTVAPSHVSANSL 814
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 95/232 (40%), Gaps = 19/232 (8%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL IA NL C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDAEIAVEDNLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 278
G + L E I I+ G L I+N S D+G ++C+ ++ G I S+ +V
Sbjct: 355 GAA---LVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLIYSSAELKVVASA 407
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
P V ++ D P H + W NV EH
Sbjct: 408 PDFSKSPMKKLVQVQVGSLVSLDCKPRASPTAH------SFWKKGDVNVQEH 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 112/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ T + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPLPHYRWQLNGSDIDTNT-----EHRYKLNGGNLVV--INPNRNWDAGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLD-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYMCVVTSMVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFN--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 171/469 (36%), Gaps = 52/469 (11%)
Query: 38 EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLES 97
E + ++D L I + + D Y C A+NQ + L V+T P
Sbjct: 452 EHERITLLKDGELKIANVT-KADAGTYTCMAENQFGKANGTTHL-VVTEPTRITLAPSNM 509
Query: 98 ETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIFE------NGNLLISPV 149
+ GE +V + C + P F W +G + FE +G+L+I +
Sbjct: 510 DVSVGE--SVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNI 567
Query: 150 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 209
SG Y C S LIV P E + ++ QL T+
Sbjct: 568 QLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV--RVDEITDTTAQLSWKEGTDNH 625
Query: 210 LDVAY--IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG 265
V I +G + + P + IDG T EYE V + +G
Sbjct: 626 SPVISYSIQARTPFSVGWQTITTV--PEV-IDGKTHTATVVELNPWVEYEFRVVASNKIG 682
Query: 266 ---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYK 313
K+ T+ V P + GG ++ I W + NG Y
Sbjct: 683 GGEPSLPSEKVRTEEAVPEVPPSEVNGGGG----SRSELVITWDPVPEELQNGEGF-GYV 737
Query: 314 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373
+ R +TW + V + RY R E+ +VP+S YE KV N G G P
Sbjct: 738 VAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-----IVPYSPYEVKVGVYNNKGEG-PF 789
Query: 374 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 433
SP + ++P APS + ++ +SW +P + N + Y++ + E
Sbjct: 790 SPVTTVFSAEEEPTVAPSHVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNSGGKE 849
Query: 434 FQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
S +K GN A +R + S YYT V+A N G GP S V
Sbjct: 850 ESSSKVKVAGNETSARLRGLKSNLAYYT----AVRAYNSAGAGPFSATV 894
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN 141
+L P F K P S G E +T+ C P P + W+ +G+ I + + N
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPLPHYRWQLNGSDIDTNTEHRYKLN 80
Query: 142 GN--LLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
G ++I+P D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDAGTYQCFATNSLGTIVSREAKLQFAYLDNFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 MCVVTSMV 202
>gi|119585939|gb|EAW65535.1| contactin 3 (plasmacytoma associated) [Homo sapiens]
Length = 901
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 242/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 207 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQ 258
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ WKK
Sbjct: 259 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKK 318
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + +G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 319 GDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 377
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 378 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 436
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 437 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 496
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 497 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 551
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 552 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 611
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 612 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 670
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 671 AEEEPTVAPSQVSANSL 687
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 180/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R + D L I + + D Y C A+
Sbjct: 304 CKPRASPRALSSW-KKGDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAE 355
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 356 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 412
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 413 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 472
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 473 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 529
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 530 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 585
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 586 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 640
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 641 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 696
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + E S +K GN A +R + S YYT V
Sbjct: 697 NTIPWKLSNGHLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AV 752
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 753 RAYNSAGAGPFSATVNV 769
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 22/186 (11%)
Query: 95 LESETYAGEGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVS 150
+ S EG V + C P +++ + + + RR + E G+L IS V
Sbjct: 1 MRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVE 60
Query: 151 RDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQL 200
D G Y+C T++ G L + P Q P + A ++L
Sbjct: 61 PSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKL 120
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
C A + + + + + L + G+LEI N DAG YEC+
Sbjct: 121 ECFALGNPIPQINWRRSDGLPFSSKIKLRKFS--------GVLEIPNFQQEDAGSYECIA 172
Query: 261 KSTVGK 266
+++ GK
Sbjct: 173 ENSRGK 178
>gi|74209635|dbj|BAE23567.1| unnamed protein product [Mus musculus]
Length = 893
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 230/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG PL Q R + +L I+ +N + D
Sbjct: 195 LDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSD 246
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L PSF+ ++ + V I C P+ +PKP
Sbjct: 247 AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPA 306
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + + R I +G+L I S+ D G Y C N+ G E L V P
Sbjct: 307 ISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-P 365
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E
Sbjct: 366 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFGKEGGHFENIRAQAS 425
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 426 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 485
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 486 SPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 540
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + G G+ +L I+WEP+ E QN
Sbjct: 541 RVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEG 600
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 601 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 659
Query: 480 VTI 482
V I
Sbjct: 660 VVI 662
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 103/273 (37%), Gaps = 24/273 (8%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 19 EIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARV 74
Query: 78 SAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
+ LTL+ E + A +G V + C P P W K
Sbjct: 75 LSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNGY 134
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
I S R + L I + DD+GIY CTA N G + +G+L + P + ++L
Sbjct: 135 IPSKSRLRK-SQAVLEIPNLQLDDAGIYGCTAENSRGKNSFRGQLQIFTYPHWVQKL-ND 192
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
+ + LQ C A + Y W NG + L ++ G+L I + +
Sbjct: 193 TQLDSGSPLQWECKATGKP--RPTYRWLKNGAPL-------LPQSRVDTVNGILAIQSVN 243
Query: 250 FADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+DAG Y+C+ ++ G I + I+ PP
Sbjct: 244 QSDAGMYQCLAENKYGAIYASAELKILASPPSF 276
>gi|358418126|ref|XP_605070.5| PREDICTED: contactin-3, partial [Bos taurus]
Length = 912
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 233/479 (48%), Gaps = 17/479 (3%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V + C P A+P+ WKK
Sbjct: 386 CIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R +G L I V++ D+GIY+C A N G L+V P+
Sbjct: 446 GEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LL + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKEGTD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + +T+ + + R S ++ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVF 796
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 190/505 (37%), Gaps = 64/505 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++ C+ P SW + GE++ E ++ F+ D L I + + D +Y
Sbjct: 425 SEVNLDCKPRASPRALSSW-KKGEVIVQE-----NERTSFLNDGGLKIVNVT-KADAGIY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFV 122
C A+NQ + L V+T P + GE +V + C + P F
Sbjct: 478 TCIAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLATMFT 534
Query: 123 WKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G + FE +G+L+I + SG Y C S LIV
Sbjct: 535 WYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETP 234
P E + K+ QL T+ V AY + +G + P
Sbjct: 595 RGSPGPPESV--KVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--P 650
Query: 235 NINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPG 283
+ IDG T EYE V + +G K+ T+ V P + G
Sbjct: 651 EV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSG 709
Query: 284 GVQVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
G ++ I W + NG + ++ + TNW + V +
Sbjct: 710 GGG----SRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTP 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
RY R E+ ++P+S YE KV N G G P SP + ++P APS++
Sbjct: 760 RYIFRNES-----ILPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTTAPSQVSANS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF 456
++ +SW +P + N + Y++ + E S LK GNV A +R + S
Sbjct: 814 LSSSEIEVSWNAIPWKLSNGHLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNL 873
Query: 457 -YYTEYEVKVQAINDVGPGPESEVV 480
YYT V+A N G GP S V
Sbjct: 874 AYYT----AVRAFNSAGTGPFSATV 894
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPER--DPAM 63
+T CEA G P Y W NG ++ L + RY I+ N++ I NP R D
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDID-----LSMEYRYKLIRGNLVVI---NPNRNWDTGN 97
Query: 64 YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKP 119
YQC A N + T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 98 YQCFATNSVGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSY 155
Query: 120 KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
+++ + + + RR + E G+L I+ V D G Y+C T TN + +
Sbjct: 156 AWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLV 215
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P Q P + A ++L C A + + + + + L
Sbjct: 216 LRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKL 275
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N D+G YEC+ +++ GK
Sbjct: 276 RKFS--------GVLEIPNFQQEDSGSYECIAENSRGK 305
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-SGVLEIPNFQQEDSGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 355 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIF 139
+L P F K P S G E +T+ C P P + W+ +G+ I R K+
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLI 80
Query: 140 ENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
++I+P D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 RGNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCSA--HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>gi|7959253|dbj|BAA96020.1| KIAA1496 protein [Homo sapiens]
Length = 920
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 242/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 226 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQ 277
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ WKK
Sbjct: 278 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKK 337
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + +G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 338 GDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 396
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 397 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 455
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 456 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 515
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 516 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 570
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 571 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 630
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 631 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 689
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 690 AEEEPTVAPSQVSANSL 706
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 180/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R + D L I + + D Y C A+
Sbjct: 323 CKPRASPRALSSW-KKGDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAE 374
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 375 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 431
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 432 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 491
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 492 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 548
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 549 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 604
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 605 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 659
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 660 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 715
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + E S +K GN A +R + S YYT V
Sbjct: 716 NTIPWKLSNGHLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AV 771
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 772 RAYNSAGAGPFSATVNV 788
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 24/202 (11%)
Query: 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGR 135
A+L+ L+ +FK + + S EG V + C P +++ + + + R
Sbjct: 6 AKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSR 63
Query: 136 RKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSYYE 184
R + E G+L IS V D G Y+C T++ G L + P
Sbjct: 64 RFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEV 123
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P + A ++L C A + + + + + L + G+LE
Sbjct: 124 QFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF--------SGVLE 175
Query: 245 ITNASFADAGEYECVVKSTVGK 266
I N DAG YEC+ +++ GK
Sbjct: 176 IPNFQQEDAGSYECIAENSRGK 197
>gi|296475002|tpg|DAA17117.1| TPA: contactin-3-like [Bos taurus]
Length = 1081
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 233/479 (48%), Gaps = 17/479 (3%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 387 SLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 438
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V + C P A+P+ WKK
Sbjct: 439 CIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSWKK 498
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R +G L I V++ D+GIY+C A N G L+V P+
Sbjct: 499 GEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTE-PTRITL 557
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LL + W NG D + E + G L+
Sbjct: 558 APSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLM- 616
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 617 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKEGTD 676
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 677 NHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 731
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 732 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 791
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + +T+ + + R S ++ YEVKV N+ G GP S V T++
Sbjct: 792 AFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVF 849
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 190/505 (37%), Gaps = 64/505 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++ C+ P SW + GE++ E ++ F+ D L I + + D +Y
Sbjct: 478 SEVNLDCKPRASPRALSSW-KKGEVIVQE-----NERTSFLNDGGLKIVNVT-KADAGIY 530
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFV 122
C A+NQ + L V+T P + GE +V + C + P F
Sbjct: 531 TCIAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLATMFT 587
Query: 123 WKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G + FE +G+L+I + SG Y C S LIV
Sbjct: 588 WYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIV 647
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETP 234
P E + K+ QL T+ V AY + +G + P
Sbjct: 648 RGSPGPPESV--KVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--P 703
Query: 235 NINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPG 283
+ IDG T EYE V + +G K+ T+ V P + G
Sbjct: 704 EV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSG 762
Query: 284 GVQVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
G ++ I W + NG + ++ + TNW + V +
Sbjct: 763 GGG----SRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTP 812
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
RY R E+ ++P+S YE KV N G G P SP + ++P APS++
Sbjct: 813 RYIFRNES-----ILPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTTAPSQVSANS 866
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF 456
++ +SW +P + N + Y++ + E S LK GNV A +R + S
Sbjct: 867 LSSSEIEVSWNAIPWKLSNGHLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNL 926
Query: 457 -YYTEYEVKVQAINDVGPGPESEVV 480
YYT V+A N G GP S V
Sbjct: 927 AYYT----AVRAFNSAGTGPFSATV 947
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPER--DPAM 63
+T CEA G P Y W NG ++ L + RY I+ N++ I NP R D
Sbjct: 99 ITLNCEARGNPSPHYRWQLNGSDID-----LSMEYRYKLIRGNLVVI---NPNRNWDTGN 150
Query: 64 YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKP 119
YQC A N + T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 151 YQCFATNSVGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSY 208
Query: 120 KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
+++ + + + RR + E G+L I+ V D G Y+C T TN + +
Sbjct: 209 AWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLV 268
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P Q P + A ++L C A + + + + + L
Sbjct: 269 LRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKL 328
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N D+G YEC+ +++ GK
Sbjct: 329 RKF--------SGVLEIPNFQQEDSGSYECIAENSRGK 358
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 292 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-SGVLEIPNFQQEDSGSYEC 350
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 351 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 407
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 408 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 460
Query: 278 P 278
P
Sbjct: 461 P 461
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 77 SSAQLRVLTLK-PSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG 134
SS + L L+ P F K P S G E +T+ C P P + W+ +G+ I
Sbjct: 67 SSTHIGELLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSM 126
Query: 135 --RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKIT 191
R K+ ++I+P D+G Y C ATN G S+ +L + ++ ++ ++
Sbjct: 127 EYRYKLIRGNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVS 186
Query: 192 IAAHRNLQLRCSA--HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
+ + + L C H+ EL +Y W N + E ++ + G L I
Sbjct: 187 VREGQGVVLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVE 240
Query: 250 FADAGEYECVVKSTV 264
+D G Y CVV STV
Sbjct: 241 PSDVGNYTCVVTSTV 255
>gi|223462499|gb|AAI50609.1| Contactin 3 (plasmacytoma associated) [Homo sapiens]
Length = 1028
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 242/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + +G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++ + + RY + L + +NP R D Y
Sbjct: 46 ITLHCEARGNPSPHYRWQLNGSDID-----MSMEHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFS--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 180/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R + D L I + + D Y C A+
Sbjct: 431 CKPRASPRALSSW-KKGDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAE 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 483 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 539
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 540 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 600 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 656
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG---- 712
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 713 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 767
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 768 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 823
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + E S +K GN A +R + S YYT V
Sbjct: 824 NTIPWKLSNGHLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AV 879
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 880 RAYNSAGAGPFSATVNV 896
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
>gi|283046667|ref|NP_001028531.2| contactin-5 isoform 2 precursor [Mus musculus]
Length = 893
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 230/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG PL Q R + +L I+ +N + D
Sbjct: 195 LDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSD 246
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L PSF+ ++ + V I C P+ +PKP
Sbjct: 247 AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPA 306
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + + R I +G+L I S+ D G Y C N+ G E L V P
Sbjct: 307 ISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-P 365
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E
Sbjct: 366 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQAS 425
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 426 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 485
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 486 SPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 540
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + G G+ +L I+WEP+ E QN
Sbjct: 541 RVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEG 600
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 601 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 659
Query: 480 VTI 482
V I
Sbjct: 660 VVI 662
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 103/273 (37%), Gaps = 24/273 (8%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 19 EIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARV 74
Query: 78 SAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
+ LTL+ E + A +G V + C P P W K
Sbjct: 75 LSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNGY 134
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
I S R + L I + DD+GIY CTA N G + +G+L + P + ++L
Sbjct: 135 IPSKSRLRK-SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKL-ND 192
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
+ + LQ C A + Y W NG + L ++ G+L I + +
Sbjct: 193 TQLDSGSPLQWECKATGKP--RPTYRWLKNGAPL-------LPQSRVDTVNGILAIQSVN 243
Query: 250 FADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+DAG Y+C+ ++ G I + I+ PP
Sbjct: 244 QSDAGMYQCLAENKYGAIYASAELKILASPPSF 276
>gi|148693018|gb|EDL24965.1| mCG142130 [Mus musculus]
Length = 1007
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 230/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG PL Q R + +L I+ +N + D
Sbjct: 309 LDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSD 360
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L PSF+ ++ + V I C P+ +PKP
Sbjct: 361 AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPA 420
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + + R I +G+L I S+ D G Y C N+ G E L V P
Sbjct: 421 ISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-P 479
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E
Sbjct: 480 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQAS 539
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 540 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 599
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 600 SPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 654
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + G G+ +L I+WEP+ E QN
Sbjct: 655 RVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEG 714
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 715 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 773
Query: 480 VTI 482
V I
Sbjct: 774 VVI 776
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 124/326 (38%), Gaps = 31/326 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG + LE RY + D I + RD
Sbjct: 22 SDEKKVALNCEVRGNPSPSYRWLRNGT-----EIALESDYRYSLIDGTFIISNPSELRDS 76
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
+YQC A N + S +F R S EG V + C+P +P+
Sbjct: 77 GLYQCLATNSFGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 135
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C TN +
Sbjct: 136 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPL 195
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 196 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSR 254
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L + + +LEI N DAG YEC +++ GK S + + + P +
Sbjct: 255 LRKSQ--------AVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKLND 306
Query: 288 VEVHKTSATIQWTDGATNGRPITHYK 313
++ S +QW AT G+P Y+
Sbjct: 307 TQLDSGSP-LQWECKAT-GKPRPTYR 330
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 104/274 (37%), Gaps = 24/274 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 132 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNAR 187
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 188 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 247
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I + DD+GIY CTA N G + +G+L + P + ++L
Sbjct: 248 YIPSKSRLRK-SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKL-N 305
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + LQ C A + Y W NG + L ++ G+L I +
Sbjct: 306 DTQLDSGSPLQWECKATGKP--RPTYRWLKNGAPL-------LPQSRVDTVNGILAIQSV 356
Query: 249 SFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+ +DAG Y+C+ ++ G I + I+ PP
Sbjct: 357 NQSDAGMYQCLAENKYGAIYASAELKILASPPSF 390
>gi|74184167|dbj|BAE37085.1| unnamed protein product [Mus musculus]
Length = 893
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 230/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG PL Q R + +L I+ +N + D
Sbjct: 195 LDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSD 246
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L PSF+ ++ + V I C P+ +PKP
Sbjct: 247 AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPA 306
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + + R I +G+L I S+ D G Y C N+ G E L V P
Sbjct: 307 ISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-P 365
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E
Sbjct: 366 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQAS 425
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 426 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 485
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 486 SPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 540
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + G G+ +L I+WEP+ E QN
Sbjct: 541 RVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEG 600
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 601 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 659
Query: 480 VTI 482
V I
Sbjct: 660 VVI 662
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 103/273 (37%), Gaps = 24/273 (8%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 19 EIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARV 74
Query: 78 SAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
+ LTL+ E + A +G V + C P P W K
Sbjct: 75 LSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNGY 134
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
I S R + L I + DD+GIY CTA N G + +G+L + P + ++L
Sbjct: 135 IPSKSRLRK-SQAVLEIPNLQLDDAGIYGCTAENSRGKNSFRGQLQIFTYPHWVQKL-ND 192
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
+ + LQ C A + Y W NG + L ++ G+L I + +
Sbjct: 193 TQLDSGSPLQWECKATGKP--RPTYRWLKNGAPL-------LPQSRVDTVNGILAIQSVN 243
Query: 250 FADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+DAG Y+C+ ++ G I + I+ PP
Sbjct: 244 QSDAGMYQCLAENKYGAIYASAELKILASPPSF 276
>gi|359078211|ref|XP_002697016.2| PREDICTED: contactin-3 [Bos taurus]
Length = 1028
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 233/479 (48%), Gaps = 17/479 (3%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NGE L E +R I++ LTI LN D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGEALVLE-------ERIQIENGALTISNLN-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V + C P A+P+ WKK
Sbjct: 386 CIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I+ R +G L I V++ D+GIY+C A N G L+V P+
Sbjct: 446 GEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LL + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKEGTD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y + ART ++ W + + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R T + +T+ + + R S ++ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVF 796
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 190/505 (37%), Gaps = 64/505 (12%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++ C+ P SW + GE++ E ++ F+ D L I + + D +Y
Sbjct: 425 SEVNLDCKPRASPRALSSW-KKGEVIVQE-----NERTSFLNDGGLKIVNVT-KADAGIY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFV 122
C A+NQ + L V+T P + GE +V + C + P F
Sbjct: 478 TCIAENQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLATMFT 534
Query: 123 WKKDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G + FE +G+L+I + SG Y C S LIV
Sbjct: 535 WYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-AY-IWTHNGVRIGNMDLNELETP 234
P E + K+ QL T+ V AY + +G + P
Sbjct: 595 RGSPGPPESV--KVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTV--P 650
Query: 235 NINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPG 283
+ IDG T EYE V + +G K+ T+ V P + G
Sbjct: 651 EV-IDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSG 709
Query: 284 GVQVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
G ++ I W + NG + ++ + TNW + V +
Sbjct: 710 GGG----SRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNW------IQTVVTSPDTP 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
RY R E+ ++P+S YE KV N G G P SP + ++P APS++
Sbjct: 760 RYIFRNES-----ILPFSLYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTTAPSQVSANS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF 456
++ +SW +P + N + Y++ + E S LK GNV A +R + S
Sbjct: 814 LSSSEIEVSWNAIPWKLSNGHLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNL 873
Query: 457 -YYTEYEVKVQAINDVGPGPESEVV 480
YYT V+A N G GP S V
Sbjct: 874 AYYT----AVRAFNSAGTGPFSATV 894
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPER--DPAM 63
+T CEA G P Y W NG ++ L + RY I+ N++ I NP R D
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDID-----LSMEYRYKLIRGNLVVI---NPNRNWDTGN 97
Query: 64 YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKP 119
YQC A N + T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 98 YQCFATNSVGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSY 155
Query: 120 KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
+++ + + + RR + E G+L I+ V D G Y+C T TN + +
Sbjct: 156 AWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLV 215
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P Q P + A ++L C A + + + + + L
Sbjct: 216 LRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKL 275
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N D+G YEC+ +++ GK
Sbjct: 276 RKF--------SGVLEIPNFQQEDSGSYECIAENSRGK 305
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-SGVLEIPNFQQEDSGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 355 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIF 139
+L P F K P S G E +T+ C P P + W+ +G+ I R K+
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLI 80
Query: 140 ENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
++I+P D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 RGNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCSA--HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>gi|75709184|ref|NP_065923.1| contactin-3 precursor [Homo sapiens]
gi|296439395|sp|Q9P232.3|CNTN3_HUMAN RecName: Full=Contactin-3; AltName: Full=Brain-derived
immunoglobulin superfamily protein 1; Short=BIG-1;
AltName: Full=Plasmacytoma-associated neuronal
glycoprotein; Flags: Precursor
gi|168275494|dbj|BAG10467.1| contactin-3 precursor [synthetic construct]
Length = 1028
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 242/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + +G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++ + + RY + L + +NP R D Y
Sbjct: 46 ITLHCEARGNPSPHYRWQLNGSDID-----MSMEHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFS--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 180/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R + D L I + + D Y C A+
Sbjct: 431 CKPRASPRALSSW-KKGDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAE 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 483 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 539
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 540 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 600 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 656
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 712
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 713 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 767
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 768 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 823
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + E S +K GN A +R + S YYT V
Sbjct: 824 NTIPWKLSNGHLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AV 879
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 880 RAYNSAGAGPFSATVNV 896
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
>gi|282847346|ref|NP_001164258.1| contactin-5 isoform 1 precursor [Mus musculus]
gi|341940370|sp|P68500.2|CNTN5_MOUSE RecName: Full=Contactin-5; AltName: Full=Neural recognition
molecule NB-2; Flags: Precursor
Length = 1098
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 230/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG PL Q R + +L I+ +N + D
Sbjct: 400 LDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSD 451
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L PSF+ ++ + V I C P+ +PKP
Sbjct: 452 AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPA 511
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + + R I +G+L I S+ D G Y C N+ G E L V P
Sbjct: 512 ISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-P 570
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E
Sbjct: 571 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQAS 630
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 631 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 690
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 691 SPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 745
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + G G+ +L I+WEP+ E QN
Sbjct: 746 RVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEG 805
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 806 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 864
Query: 480 VTI 482
V I
Sbjct: 865 VVI 867
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 124/326 (38%), Gaps = 31/326 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG + LE RY + D I + RD
Sbjct: 113 SDEKKVALNCEVRGNPSPSYRWLRNGT-----EIALESDYRYSLIDGTFIISNPSELRDS 167
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
+YQC A N + S +F R S EG V + C+P +P+
Sbjct: 168 GLYQCLATNSFGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 226
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C TN +
Sbjct: 227 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPL 286
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 287 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSR 345
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L + + +LEI N DAG YEC +++ GK S + + + P +
Sbjct: 346 LRKSQ--------AVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKLND 397
Query: 288 VEVHKTSATIQWTDGATNGRPITHYK 313
++ S +QW AT G+P Y+
Sbjct: 398 TQLDSGSP-LQWECKAT-GKPRPTYR 421
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 104/274 (37%), Gaps = 24/274 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 223 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNAR 278
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 279 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 338
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I + DD+GIY CTA N G + +G+L + P + ++L
Sbjct: 339 YIPSKSRLRK-SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKL-N 396
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + LQ C A + Y W NG + L ++ G+L I +
Sbjct: 397 DTQLDSGSPLQWECKATGKP--RPTYRWLKNGAPL-------LPQSRVDTVNGILAIQSV 447
Query: 249 SFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+ +DAG Y+C+ ++ G I + I+ PP
Sbjct: 448 NQSDAGMYQCLAENKYGAIYASAELKILASPPSF 481
>gi|296487720|tpg|DAA29833.1| TPA: contactin-1 precursor [Bos taurus]
Length = 1018
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 242/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKP
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPT 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+W K + + R I+E+G+L I+ ++R D G+Y+C N G S G L++ P
Sbjct: 446 FLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 680 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENNRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHRGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 190/497 (38%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P T+ W + E L+NS + +D L I + D +Y C +
Sbjct: 436 CKPKAAPKPTFLWSKGTERLVNSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N K + +S V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NN-KGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 664 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 713
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 714 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 771
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + ++ D P +AP+ +G ++
Sbjct: 772 E-----TMRPSTAFQVKVKAFNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEI 825
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + + I Y K+ +EY R+ + T+Y V
Sbjct: 826 SVHWEHVVEKIVESYQIRYWASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYFV 879
Query: 464 KVQAINDVGPGPESEVV 480
+V+A N G GP S+++
Sbjct: 880 EVRACNSAGCGPPSDMI 896
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|440905205|gb|ELR55618.1| Contactin-1, partial [Bos grunniens mutus]
Length = 987
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 242/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 311 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------------VTFENA--- 355
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKP
Sbjct: 356 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPT 414
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+W K + + R I+E+G+L I+ ++R D G+Y+C N G S G L++ P
Sbjct: 415 FLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITD-P 473
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 474 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 533
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 534 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 593
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 594 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 648
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 649 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 708
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 709 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 767
Query: 480 VTI 482
I
Sbjct: 768 AVI 770
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 10 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 68
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 69 INNPDKQQDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 125
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 126 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 181
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 182 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 219
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 136 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 190
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 191 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 250
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N G D+ + R+ V P +
Sbjct: 251 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENNRGKDKHQARIYVQAFPEW 302
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 303 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHRGE 344
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 345 LRLYDVTFENAGMYQCIAENTHGAI 369
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 202/523 (38%), Gaps = 77/523 (14%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P T+ W + E L+NS + +D L I + D +Y C +
Sbjct: 405 CKPKAAPKPTFLWSKGTERLVNSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVE 456
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N K + +S V+T P+ ++ GE + + + A FVW +G +
Sbjct: 457 NN-KGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 515
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 516 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 575
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 576 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 632
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 633 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 682
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V + RY +
Sbjct: 683 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKD 740
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + ++ D P +AP+ +G ++
Sbjct: 741 E-----TMRPSTAFQVKVKAFNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEI 794
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK----EYGNVGIAVVRIPSEFYYT 459
S+ WE + + + Y+I + +D E + ++ EY R+ + T
Sbjct: 795 SVHWEHVVEKIVES----YQIRYWASHDKEAAAHRVQVASQEYS------ARLENLLPDT 844
Query: 460 EYEVKVQAINDVGPGPESEVVTIW------HDPLVIISYVCQG 496
+Y V+V+A N G GP S+++ + P IIS V G
Sbjct: 845 QYFVEVRACNSAGCGPPSDMIETFTKKAPPSQPPRIISSVRSG 887
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 27 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQQDA 78
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 79 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 135
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 136 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 195
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 196 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 246
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 247 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI 306
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 307 NDTEV-DIGSDLYWPCVAT-GKPI 328
>gi|432891359|ref|XP_004075560.1| PREDICTED: contactin-5-like [Oryzias latipes]
Length = 1054
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 228/483 (47%), Gaps = 18/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MD+ L W C+A P TY W RNG LPL Q R I + L+I + + D
Sbjct: 361 MDSGEKLQWECKAISRPRPTYRWLRNG-------LPLASQGRVEIMNGELSIHKVQ-QTD 412
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ YS+A+L++L P F P+ A G + + C P A+PKP+
Sbjct: 413 SGMYQCVAENKYGAIYSNAELKILASAPVFFHNPVR--VIATLGKDAFLECKPRASPKPR 470
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WK++ I R + N L I SR D G Y C A N G E L V
Sbjct: 471 ITWKREDRRIQPNKRIILLRNNTLKIVNSSRADEGNYVCRAENQLGSAELTAVLWVKEAM 530
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINID 239
P K+ + ++ L C A + LDVA+ W N I D N E
Sbjct: 531 RVVLS-PSKVEVTVGESVVLSCKATHDTSLDVAFQWFFNQKPIIFQQDGNHFEYIQTQSS 589
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I + AG+Y C +++ + T+ ++V GPPG PG V V E+ +AT+ W
Sbjct: 590 TVDLMIRSILLRHAGKYGCRAQTSADSVFTEAELLVRGPPGPPGVVIVEEITDHTATLSW 649
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
T G N PI+ Y + AR+ ++ W + + D TG E+++ L PW YEF
Sbjct: 650 TRGLDNHSPISTYNLQARSPFSLGW-----QTVKTDPDPVTGDMESAMAVELNPWVEYEF 704
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS + T P APS + GG G+ +L ISWEP+ E QN
Sbjct: 705 RVVASNAIGTGDPSAPSRRVRTKEAVPSVAPSNVSGGDGRRHELVISWEPVSEEFQNGEG 764
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R + T +EVKV N+ G GP S+V
Sbjct: 765 FGYIVAFR-ANGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVKVGVYNNKGDGPFSQV 823
Query: 480 VTI 482
V I
Sbjct: 824 VII 826
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 100/262 (38%), Gaps = 29/262 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTR 75
P++ YSW N + ED R+ QD L I + P D Y C KN +
Sbjct: 184 PEIIYSWVFN----EFPSFVAEDSRRFISQDTGNLYISKVQPS-DVGSYICLVKNPVTNA 238
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
+ LTLK P + S A +G V + C P P W+K
Sbjct: 239 RVLSPPTPLTLKTDGVMGEYEPKIEVH-FPSSVLAAKGVTVRLECFALGNPVPTITWRKI 297
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+GNI RK L I + +DDSG+Y C A N G KG L V P +
Sbjct: 298 NGNIPKRARLRK--SQAVLEIPNIQQDDSGVYECKAENPRGGTAFKGHLQVYTLPQWVRM 355
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ + + LQ C A + Y W NG+ + + + I G L I
Sbjct: 356 I-NDTQMDSGEKLQWECKAISRP--RPTYRWLRNGLPLASQG-------RVEIMNGELSI 405
Query: 246 TNASFADAGEYECVVKSTVGKI 267
D+G Y+CV ++ G I
Sbjct: 406 HKVQQTDSGMYQCVAENKYGAI 427
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 105/274 (38%), Gaps = 29/274 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P TYSW+ NG ++S+T RY D L I + D YQC+++N
Sbjct: 83 CEARGNPPPTYSWYINGTRVDSDT-----DYRYSFIDGDLIITNASEITDFGKYQCKSEN 137
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVW--KKDG 127
+ S L +F + EG V + C+P +P+ + W +
Sbjct: 138 SFGSILSRDALLQFAYLGAFSTKS-RGAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFP 196
Query: 128 NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCT----ATNVHGMDESKGRLIVLHG--- 179
+ + RR I ++ GNL IS V D G Y C TN + + G
Sbjct: 197 SFVAEDSRRFISQDTGNLYISKVQPSDVGSYICLVKNPVTNARVLSPPTPLTLKTDGVMG 256
Query: 180 ---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P P + A ++L C A + + + ++ N + +
Sbjct: 257 EYEPKIEVHFPSSVLAAKGVTVRLECFALGNPVPTITW---------RKINGNIPKRARL 307
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+LEI N D+G YEC ++ G + K
Sbjct: 308 RKSQAVLEIPNIQQDDSGVYECKAENPRGGTAFK 341
>gi|332231546|ref|XP_003264956.1| PREDICTED: contactin-3 [Nomascus leucogenys]
Length = 1028
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 244/499 (48%), Gaps = 24/499 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W ++G L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKDGAALVLE-------ERIQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ + WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + ++G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHERISLLKDGGLKIANVTKADAGTYTCMAENQFGKASGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P + ++ ++ L C + LLD+ + W NG D + + + G G
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGAL---ADFKKEGSHFEKVGGSSSGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 562 LMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+
Sbjct: 622 KDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y
Sbjct: 677 ASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + +T+ + V R S Y+ YEVKV N+ G GP S V T+
Sbjct: 737 VVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTV 795
Query: 483 W---HDPLVIISYVCQGDL 498
+ +P V S V L
Sbjct: 796 FSAEEEPTVAPSQVSANSL 814
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++ + + RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDID-----MSMEHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSAVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFS--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 177/495 (35%), Gaps = 52/495 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R ++D L I + + D Y C A+
Sbjct: 431 CKPRASPRARSSW-KKGDV------SVQEHERISLLKDGGLKIANVT-KADAGTYTCMAE 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 483 NQFGKASGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 539
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 540 ALADFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 600 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 656
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 712
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 713 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 767
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 768 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 823
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+P + N + Y++ + E S +K GN A R+ Y V+A
Sbjct: 824 NTIPWKLSNGHLLGYEVRYWNGGGKEESSSKVKVAGNETSA--RLQGLKSNLAYYTAVRA 881
Query: 468 INDVGPGPESEVVTI 482
N G GP S V +
Sbjct: 882 YNSAGSGPFSATVNV 896
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSAVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
>gi|27805871|ref|NP_776705.1| contactin-1 precursor [Bos taurus]
gi|55976304|sp|Q28106.1|CNTN1_BOVIN RecName: Full=Contactin-1; AltName: Full=Neural cell surface
protein F3; Flags: Precursor
gi|1060861|dbj|BAA06861.1| F3/F11/Contactin [Bos taurus]
Length = 1018
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 242/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKP
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPT 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+W K + + R I+E+G+L I+ ++R D G+Y+C N G S G L++ P
Sbjct: 446 FLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 680 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYFNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENNRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHRGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 184/490 (37%), Gaps = 51/490 (10%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P T+ W + E L+NS + +D L I + D +Y C +
Sbjct: 436 CKPKAAPKPTFLWSKGTERLVNSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N K + +S V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NN-KGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
EYE V +T+G KI T P + GG
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----S 719
Query: 292 KTSATIQWTDGATNGRPITHYK-IIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W + ++ I+A ++ W V+ V + RY + E
Sbjct: 720 NRELTITWAPLSREYHYFNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDE----- 772
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + ++ KV A N G G P S + ++ D P +AP+ +G ++S+ WE
Sbjct: 773 TMRPSTAFQVKVKAFNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEH 831
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + + I Y K+ +EY R+ + T+Y V+V+A N
Sbjct: 832 VVEKIVESYQIRYWASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYFVEVRACN 885
Query: 470 DVGPGPESEV 479
G GP S++
Sbjct: 886 SAGCGPPSDM 895
>gi|344266727|ref|XP_003405431.1| PREDICTED: contactin-1-like [Loxodonta africana]
Length = 1037
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 247/483 (51%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 353 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 397
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 398 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 456
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + + I+E+G+L I+ ++R+D GIY+C A N G S G L++ + P
Sbjct: 457 FSWSKGTEWLVNSSKVLIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITN-P 515
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 516 TRIILAPINADITVGENATMQCAAAADPALDLTFVWSFNGYVIDFNKENTHYQRNFMLDS 575
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ +V TSA + W
Sbjct: 576 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDVRATSAALTW 635
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 636 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 690
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 691 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNN 750
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ ++G V + + T ++VKV+A N+ G GP S
Sbjct: 751 FGYIVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 809
Query: 480 VTI 482
I
Sbjct: 810 AVI 812
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 53 RYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT-----LKPSFKKRPLESETYAGEG--G 105
R LN E + + C K Y + +V++ P F+++P+ + Y E G
Sbjct: 18 RVLNKEPESFPWSCEGK------YLCFKRKVVSEEDKGFGPIFEEQPVNT-VYPEESPEG 70
Query: 106 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 164
V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 71 KVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQQDAGIYYCLASNN 130
Query: 165 HGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 131 YGMVRSIEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHYPDDLSYRWLLNE 187
Query: 221 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ MD ++ G L I N +D G Y C V S S +V + P
Sbjct: 188 FPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFIP 239
Query: 280 GLPGGVQVVEVHKTSATIQWTD 301
+P + + + +Q+ D
Sbjct: 240 LIPLPERTTKPYPADIVVQFKD 261
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 98/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 178 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 232
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVTI C P P W+K
Sbjct: 233 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTIECFALGNPVPDIRWRKVLEP 292
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N+ G D+ K R+ V P +
Sbjct: 293 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENIKGKDKHKARIYVQAYPEW 344
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 345 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 386
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 387 LRLYDVTFENAGMYQCIAENTHGAI 411
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 184/496 (37%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 447 CKPKAAPKPKFSWSKGTEWLVNSSKV-------LIWEDGSLEINNIT-RNDGGIYTCFAE 498
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + A FVW +G +
Sbjct: 499 NNRGKANSTGTL-VITNPTRIILAPINADITVGENATMQCAAAADPALDLTFVWSFNGYV 557
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 558 IDFNKENTHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 617
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L + A L + + I T I + D + +T I+G +
Sbjct: 618 PGGLRIEDVRATSAALTWSRGSDNHSPISKYTIQTKT---ILSDDWKDAKTDPPIIEGNM 674
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD- 301
EYE V ++T T I G P +P ++ + + +D
Sbjct: 675 EAARAVDLIPWMEYEFRV------VATNTLGI--GEPSIPS--NKIKTDGAAPNVAPSDV 724
Query: 302 --GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
G + R +T HY I+A ++ W V+ V ++ RY +
Sbjct: 725 GGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDIGRYVHKD 782
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E + P + ++ KV A N G G P S + N+ D P +AP+ +G ++
Sbjct: 783 E-----TMRPSTAFQVKVKAFNNKGDG-PYSLTAVINSAQDAPSEAPTEVGIKVLSSSEM 836
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
S+ WE + + I Y K+ + +EY R+ + T+Y V
Sbjct: 837 SVHWEHVVEKVVEGYQIRYWAAHDKEAAAHRVQVSSQEYS------ARLENLVPDTQYFV 890
Query: 464 KVQAINDVGPGPESEV 479
+V+A N G GP S+V
Sbjct: 891 EVRACNSAGCGPPSDV 906
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 119/324 (36%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 69 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQQDA 120
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R A L L P ++RP E EG + + C+P
Sbjct: 121 GIYYCLASNNYGMVRSIEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHYPD 177
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 178 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 237
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ + C A + D +R
Sbjct: 238 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTIECFALGNPVPD---------IRWRK 288
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK K + V+ P +
Sbjct: 289 VLEPMPSTAEISTSGAVLKIFNIQLEDEGTYECEAENIKGKDKHKARIYVQAYPEWVEHI 348
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 349 NDTEV-DIGSDLYWPCVAT-GKPI 370
>gi|410972405|ref|XP_003992650.1| PREDICTED: contactin-5-like, partial [Felis catus]
Length = 680
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG L LP Q+R + + VL I +N + D
Sbjct: 170 LDSGSPLRWECKATGKPRPTYRWLKNGVSL----LP---QNRIEMVNGVLMIHNVN-QSD 221
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ ++SA+L++L P+F ++ + V I C P+ +PKP
Sbjct: 222 AGMYQCLAENKYGAIFASAELKILASAPTFALNQMKKTIIITKDQEVIIQCKPQGSPKPT 281
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E+ + V P
Sbjct: 282 ISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCQGENVFGSAETIASVSVKE-P 340
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E+
Sbjct: 341 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFESIRAQAS 400
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V ++ +++AT+ W
Sbjct: 401 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEDITESTATLSW 460
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ + N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 461 SPASDNHSPISSYNLQARSPFSLGW-----QTVKTIPEIITGDMESAMAVDLNPWVEYEF 515
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 516 RVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEG 575
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 576 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 634
Query: 480 VTI 482
V I
Sbjct: 635 VVI 637
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 22/270 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T +W + + S+ R VL I + + D +Y+CRA+N
Sbjct: 91 CFALGNPVPTITWMKVNGYIPSKA-------RLRKSQAVLEIPNVQLD-DAGLYECRAEN 142
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
QL+V T +K ++T G + C P+P + W K+G +
Sbjct: 143 SRGKNSFRGQLQVYTYPHWVEKL---NDTQLDSGSPLRWECKATGKPRPTYRWLKNGVSL 199
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-HGPSY-YEQLPP 188
R ++ NG L+I V++ D+G+Y C A N +G + L +L P++ Q+
Sbjct: 200 LPQNRIEMV-NGVLMIHNVNQSDAGMYQCLAENKYGAIFASAELKILASAPTFALNQMKK 258
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
I I + + ++C +++ + G+ + E + I DG L I NA
Sbjct: 259 TIIITKDQEVIIQCKPQGSPKPTISW-------KKGDKAVRENKRIAILPDGS-LRILNA 310
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGP 278
S +D G+Y C ++ G T +V V+ P
Sbjct: 311 SKSDEGKYVCQGENVFGSAETIASVSVKEP 340
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A +G V + C P P W K I S R + + L I V DD+G+Y C
Sbjct: 81 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQ-AVLEIPNVQLDDAGLYECR 139
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 140 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 196
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
V + + N +E N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 197 VSL--LPQNRIEMVN-----GVLMIHNVNQSDAGMYQCLAENKYGAIFASAELKILASAP 249
>gi|326911406|ref|XP_003202050.1| PREDICTED: contactin-1-like [Meleagris gallopavo]
Length = 1010
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 241/483 (49%), Gaps = 24/483 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P T W +NG L ++ LT D
Sbjct: 334 DIGSDLYWPCVATGKPIPTIRWLKNGVSFRKGELRIQS----------LTFE------DA 377
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L+++ P+F+ P++ + A +GG V I C P+AAPKPKF
Sbjct: 378 GMYQCIAENTHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKF 437
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ +G R +I+++G+L I V++ D G Y+C A N G S G L + +
Sbjct: 438 SWSKGTELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEA-T 496
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DG 240
P + + N ++C A + LD+ +IW+ NG I +E N+ I
Sbjct: 497 RITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSN 556
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG Y C ++ V S ++V GPPG PGG+++ E+ T+ + W+
Sbjct: 557 GELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRIEEIRDTAVALTWS 616
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI+ Y I ++T + W + E G E++ L+PW YEF+
Sbjct: 617 RGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDIEGNMESARVIDLIPWMEYEFR 671
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+IA N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 672 IIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNF 731
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + ++ + E++ T+ +G V + S T+Y+VKV+A N+ G GP S
Sbjct: 732 GYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVKVKAFNNKGDGPFSLTA 790
Query: 481 TIW 483
I+
Sbjct: 791 VIY 793
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 105/279 (37%), Gaps = 50/279 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 159 DLSYRW-----LLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK- 212
Query: 77 SSAQLRVLTLKPSFKKRPLE--------SETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
S + + L P + + +TYA G NVT+ C P P+ W K
Sbjct: 213 -SVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLE 271
Query: 126 ----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG KIF + +D G+Y C A N G D+ + R+ V P
Sbjct: 272 PMPATAEISMSGAVLKIFN--------IQYEDEGLYECEAENYKGKDKHQARVYVQASPE 323
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E + +L C A + + + W NGV + G
Sbjct: 324 WVEHI-NDTEKDIGSDLYWPCVATGKPIPTIR--WLKNGV---------------SFRKG 365
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
L I + +F DAG Y+C+ ++T G I + IV PP
Sbjct: 366 ELRIQSLTFEDAGMYQCIAENTHGIIYANAELKIVASPP 404
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 112/292 (38%), Gaps = 33/292 (11%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+ ++ C A VP TY W LN+ + L +DRY + L I RD
Sbjct: 49 SDGQVSMNCRARAVPFPTYKW-----KLNNWDIDL-TKDRYSMVGGRLIISNPEKSRDAG 102
Query: 63 MYQCRAKNQLKT-RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C N T R S A L L P + E + G G + C P
Sbjct: 103 KYVCIVSNIFGTVRSSEATLSFGYLDPFPPEEHYEVKVREGVGA--VLLCEPPYHYPDDL 160
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 161 SYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 220
Query: 177 LHGPSYYEQLPP-------KITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + ++ P K T A +N+ L C A + ++ + + L
Sbjct: 221 LIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRW----------SKYL 270
Query: 229 NEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ T I++ G +L+I N + D G YEC ++ GK + V V+ P
Sbjct: 271 EPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASP 322
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 178/493 (36%), Gaps = 51/493 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL N + + D D L I + + D Y C A+
Sbjct: 427 CKPKAAPKPKFSWSKGTELLVNGSRIRIWD-------DGSLEIINVT-KLDEGRYTCFAE 478
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + + +S + +T PL + GE + + + F+W +G +
Sbjct: 479 NN-RGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFV 537
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I + +E NG LLI V +G Y+CTA + + L+V P
Sbjct: 538 IDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGP 597
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ +I + L S T+ ++ +T + + + +T +I+G +
Sbjct: 598 PGGI--RIEEIRDTAVALTWSRGTDNHSPISK-YTIQSKTFLSEEWKDAKTEPSDIEGNM 654
Query: 243 LEITNASFADAGEYECVVKST----VGKISTKTTVI-VEG-PPGL-PGGVQVVEVHKTSA 295
EYE + +T G+ S + I EG PP + P V
Sbjct: 655 ESARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNREL 714
Query: 296 TIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W N I +K W V E+ RY + E+
Sbjct: 715 TITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRV------TVTNPEIGRYVHKDES---- 764
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + Y+ KV A N G G P S + + D P + P+ + ++S+SW
Sbjct: 765 -MPPSTQYQVKVKAFNNKGDG-PFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHH 822
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + I Y K+ + + +EY ++ + T Y + V A N
Sbjct: 823 VTEKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYST------KLENLKPNTRYHIDVSAFN 876
Query: 470 DVGPGPESEVVTI 482
G GP S V I
Sbjct: 877 SAGYGPPSRTVDI 889
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 16/183 (8%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ Y E G V++ C A P P + WK + I R G L+
Sbjct: 33 PVFEEQPIDT-IYPEESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLI 91
Query: 146 IS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
IS P D+G Y C +N+ G S + Y + PP ++ + L
Sbjct: 92 ISNPEKSRDAGKYVCIVSNIFGTVRSSEATLSF---GYLDPFPPEEHYEVKVREGVGAVL 148
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + +D ++ G L I N +D G Y C
Sbjct: 149 LCEPPYHYPDDLSYRWLLNEFPVFIALDRRRF----VSQTNGNLYIANVEASDKGNYSCF 204
Query: 260 VKS 262
V S
Sbjct: 205 VSS 207
>gi|405963886|gb|EKC29418.1| Protein roadkill [Crassostrea gigas]
Length = 1991
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 239/501 (47%), Gaps = 27/501 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + LTW CEA G P Y+WF+NGE+L I N+LTI L E+
Sbjct: 835 VDKGSQLTWRCEAMGYPQPVYTWFKNGEILQENV-----NSDLVITGNILTIPNL-AEKH 888
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A N T S+ QLRVL P+ +K P++S G + I C PEAAP P
Sbjct: 889 NGMYQCAATNVHGTAMSAGQLRVLYFSPTLQKYPVQSHMVGALNGEIIIMCKPEAAPAPT 948
Query: 121 FVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN-VHGMDESKGRLIVLH 178
W K+ +I G R K+ NGNL I ++ D+G Y+C A N + +S G+L++
Sbjct: 949 ITWTKNSISISPDGNRIKLMPNGNLQIKDLTYGDAGFYTCIADNGIPPAAKSTGQLVIQS 1008
Query: 179 GPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+PP + +R + C A + LD+ Y+WT NG ++ + + + N
Sbjct: 1009 ATVI--TIPPYTDPVVVNRTTFIPCKASYDINLDLVYMWTFNG-KLIDFEKEFHYRLDTN 1065
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT--SA 295
L I F AG YEC+ K+T+ + + T ++V GPPG P GV V+ T S
Sbjct: 1066 PSHSGLNIIMTQFKHAGVYECIAKTTLNQEAKSTPLVVYGPPGEPAGVVGVDGSATHNSI 1125
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH------VIGKEVDRYTGRKEASIEN 349
+ + GA +G ++H+ + + W +S++ V+ + ++ IE
Sbjct: 1126 LLAFFPGAEHGSRVSHFIVEREIEYEPGWKLISQNYPEPFTVVQGTGGQNKDMRQIKIEE 1185
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA--PSRIGGGGGKIGDLSISW 407
L P + Y F++ N+ G G S PSP T P A I GG G +GDLSI W
Sbjct: 1186 DLHPGNGYRFRIAGVNQYGVGTWSVPSPFIETKPAAPDVAVDSEYIVGGNGSVGDLSILW 1245
Query: 408 EPLPREKQNAPNIYYKIFWRKKN-----DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +E AP Y ++WR+ D ++ E E V++ E YY EYE
Sbjct: 1246 NRMDQEFHGAPGFGYIVYWRRYKPSSVYDALWRKEGPFEDWTKDRLTVQVGEENYYLEYE 1305
Query: 463 VKVQAINDVGPGPESEVVTIW 483
+K+Q N +G GP S ++
Sbjct: 1306 IKIQVYNVMGKGPNSTEAVVY 1326
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 25/268 (9%)
Query: 21 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80
Y+W R G + E + D +R VL I+ E D Y C K K R S
Sbjct: 765 YTWTREGRPM-PENAEMADFNR------VLLIKNARLE-DQGNYVCHVKRGNKARDSKMI 816
Query: 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE 140
L P F PLE + + +G +T C P+P + W K+G I+ +
Sbjct: 817 ALRLEAVPYFII-PLEDQ-HVDKGSQLTWRCEAMGYPQPVYTWFKNGEILQENVNSDLVI 874
Query: 141 NGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
GN+L P ++ +G+Y C ATNVHG S G+L VL+ ++ P + + N +
Sbjct: 875 TGNILTIPNLAEKHNGMYQCAATNVHGTAMSAGQLRVLYFSPTLQKYPVQSHMVGALNGE 934
Query: 200 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE-TPNINIDGGLLEITNASFADAGEYEC 258
+ E WT N + I + D N ++ PN G L+I + ++ DAG Y C
Sbjct: 935 IIIMCKPEAAPAPTITWTKNSISI-SPDGNRIKLMPN-----GNLQIKDLTYGDAGFYTC 988
Query: 259 VVKS-------TVGKISTKTTVIVEGPP 279
+ + + G++ ++ ++ PP
Sbjct: 989 IADNGIPPAAKSTGQLVIQSATVITIPP 1016
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 105/290 (36%), Gaps = 52/290 (17%)
Query: 13 AFGVPDVTYSW--FRNG-----ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
A G P +Y W FR L N+ET+ RY + + TI + D +YQ
Sbjct: 527 AVGYPQPSYEWKRFRGSNTTINSLANAETITSTLNSRYTLTNGKFTIENPDENMDAGVYQ 586
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--W 123
C KN++ S+ F +++ A E + C+ A KP V W
Sbjct: 587 CLVKNEIGAILSNPIKISFGFLGEFSNVK-DADVNAPEYEGAVMQCS-NIAYKPAVVYNW 644
Query: 124 KKDGNIIGSGGRRKIFE----------NGNLLISPVSRDDSGIYSC-------TATNVHG 166
+D G R I + NGNL S V + D Y C T NV
Sbjct: 645 MRDMK----GEPRPIIKTMTPYVFMSYNGNLYFSEVGKVDDNNYYCQVSLTSLTTRNVGD 700
Query: 167 MDE-SKGRL-----IVLHGPSY---------YEQLPPKITIAAHRNLQLRCSAHTEELLD 211
+ SK L ++ P + + PK + H N+++ C A+ +
Sbjct: 701 IQSGSKTSLPIKLNVLAQAPKTEWGPDIQDDFINVFPKPPLKGH-NVRMECFAYGSA-NN 758
Query: 212 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
+W + R G E + N +L I NA D G Y C VK
Sbjct: 759 YVEMWRYTWTREGRPMPENAEMADFN---RVLLIKNARLEDQGNYVCHVK 805
>gi|449272003|gb|EMC82133.1| Contactin-1, partial [Columba livia]
Length = 946
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 241/483 (49%), Gaps = 24/483 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P T W +NG L ++ LT D
Sbjct: 304 DIGSDLYWPCVATGKPMPTIRWLKNGASFRKGELRMQS----------LTFD------DA 347
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L+++ P+F+ P++ + A +GG V I C P+AAPKPKF
Sbjct: 348 GMYQCIAENTHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKF 407
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ +G R +I+++G+L I +++ D G Y+C A N G S G L + +
Sbjct: 408 SWSKGTELLVNGTRIRIWDDGSLEIVNITKLDEGRYTCFAENNRGKANSTGVLEMTEA-T 466
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DG 240
P + + N ++C A + LD+ +IW+ NG I +E N+ I
Sbjct: 467 RITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSN 526
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG Y C ++ V S ++V GPPG PGG++V E+ T+ + W+
Sbjct: 527 GELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRVEEIRDTAVALTWS 586
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI+ Y I ++T + W + E G E++ L+PW YEF+
Sbjct: 587 RGTDNHSPISKYTIQSKTFLSEEWKDAKTDPSDIE-----GNMESATVIDLIPWMEYEFR 641
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+IA N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 642 IIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNF 701
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + ++ + E++ T+ +G V + S T+Y+VKV+A N+ G GP S
Sbjct: 702 GYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVKVKAFNNKGDGPFSLTA 760
Query: 481 TIW 483
I+
Sbjct: 761 VIY 763
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 104/279 (37%), Gaps = 50/279 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 129 DLSYRW-----LLNEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK- 182
Query: 77 SSAQLRVLTLKPSFKKRPLE--------SETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
S + + L P + + +TYA G NVT+ C P P+ W K
Sbjct: 183 -SVFSKFIPLIPQSDRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLE 241
Query: 126 ----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG KIF + +D G+Y C A N G D+ + R+ V P
Sbjct: 242 PMPASAEISMSGAVLKIFN--------IQYEDEGLYECEAENYKGKDKHQARIYVQAAPE 293
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E + +L C A + + + W NG + G
Sbjct: 294 WVEHI-NDTEKDIGSDLYWPCVATGKPMPTIR--WLKNGA---------------SFRKG 335
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
L + + +F DAG Y+C+ ++T G I + IV PP
Sbjct: 336 ELRMQSLTFDDAGMYQCIAENTHGIIYANAELKIVASPP 374
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 180/496 (36%), Gaps = 57/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN----VLTIRYLNPERDPAMYQC 66
C+ P +SW + ELL + T R I D+ ++ I L D Y C
Sbjct: 397 CKPKAAPKPKFSWSKGTELLVNGT-------RIRIWDDGSLEIVNITKL----DEGRYTC 445
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N + + +S + +T PL + GE + + + F+W +
Sbjct: 446 FAENN-RGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLN 504
Query: 127 GNIIGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
G +I + +E NG LLI V +G Y+CTA + + L+V
Sbjct: 505 GFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGP 564
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
P + ++ + L S T+ ++ +T + + + +T +I+
Sbjct: 565 PGPPGGI--RVEEIRDTAVALTWSRGTDNHSPISK-YTIQSKTFLSEEWKDAKTDPSDIE 621
Query: 240 GGLLEITNASFADAGEYECVVKST----VGKISTKTTVI-VEG-PPGL-PGGVQVVEVHK 292
G + T EYE + +T G+ S + I EG PP + P V
Sbjct: 622 GNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSN 681
Query: 293 TSATIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
TI W N I +K W V E+ RY + E+
Sbjct: 682 RELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRV------TVTNPEIGRYVHKDES- 734
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ P + Y+ KV A N G G P S + + D P + P+ + ++S+S
Sbjct: 735 ----MPPSTQYQVKVKAFNNKGDG-PFSLTAVIYSAQDAPTEIPTDVSIKVLSSSEMSVS 789
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
W + + I Y K+ + + +EY ++ + T Y V V
Sbjct: 790 WHHVSDKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYS------TKLENLKPNTRYHVDVS 843
Query: 467 AINDVGPGPESEVVTI 482
A N G GP S + +
Sbjct: 844 AFNSAGYGPPSRTIDV 859
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 16/183 (8%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ Y E G V++ C A P P + WK + I R G L+
Sbjct: 3 PVFEEQPIDT-IYPEESSDGQVSMNCRARAIPFPTYRWKLNNWDIDLTKDRYSMVGGRLV 61
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
I +P D+G Y C +N+ G S + Y + PP ++ + L
Sbjct: 62 INNPEKSRDAGKYVCVVSNIFGTVRSYEATLSF---GYLDPFPPEERYEVKVREGVGAVL 118
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + +D ++ G L I N +D G Y C
Sbjct: 119 LCEPPYHYPDDLSYRWLLNEFPVFIALDKRRF----VSQTNGNLYIANVEASDKGNYSCF 174
Query: 260 VKS 262
V S
Sbjct: 175 VSS 177
>gi|449481132|ref|XP_004177255.1| PREDICTED: LOW QUALITY PROTEIN: contactin-1 [Taeniopygia guttata]
Length = 1050
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 240/483 (49%), Gaps = 24/483 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P T W +NG L ++ LT D
Sbjct: 348 DIGSDLYWPCVATGKPIPTIRWLKNGASFRKGELRMQS----------LTFD------DA 391
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L+++ P+F+ P++ + A +GG V I C P+AAPKPKF
Sbjct: 392 GMYQCIAENMHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKF 451
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ +G R +I+++G+L I V++ D G Y+C A N G S G L + +
Sbjct: 452 SWSKGTELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEA-T 510
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DG 240
P + + N ++C A + LD+ +IW+ NG I +E N+ I
Sbjct: 511 RITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSN 570
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG Y C ++ V S ++V GPPG PGG++V E+ T+ + W+
Sbjct: 571 GELLIKNVQLRHAGRYMCTAQTIVDNSSASADLVVRGPPGPPGGIRVEEIRDTAVALTWS 630
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI+ Y I ++T + W + E G E++ L+PW YEF+
Sbjct: 631 RGTDNHSPISKYTIQSKTFLSEEWKDAKTDPSDIE-----GNMESATVIDLIPWMEYEFR 685
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+IA N LG GEPS PSP+ T P APS +GGGGG +L+I+W L RE N
Sbjct: 686 IIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGGGGGSNRELTITWMLLSREYHYGNNF 745
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + ++ + E++ T +G V + S T+Y+VKV+A N+ G GP S
Sbjct: 746 GYIVAFKPFGEKEWRRVTXTN-PEIGRYVHKDESMPPSTQYQVKVKAFNNKGDGPFSLTA 804
Query: 481 TIW 483
I+
Sbjct: 805 VIY 807
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 103/279 (36%), Gaps = 50/279 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 173 DLSYRW-----LLNEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK- 226
Query: 77 SSAQLRVLTLKPSFKKRPLE--------SETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
S + + L P + + +TYA G NVT+ C P P+ W K
Sbjct: 227 -SVFSKFIPLIPQSDRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLE 285
Query: 126 ----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG KIF + +D G+Y C A N G D+ + R+ V P
Sbjct: 286 PLPASAEISMSGAVLKIFN--------IQYEDEGLYECEAENYKGKDKHQARVYVQAAPE 337
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E + +L C A + + + W NG + G
Sbjct: 338 WVEHI-NDTERDIGSDLYWPCVATGKPIPTIR--WLKNGA---------------SFRKG 379
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
L + + +F DAG Y+C+ ++ G I + IV PP
Sbjct: 380 ELRMQSLTFDDAGMYQCIAENMHGIIYANAELKIVASPP 418
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 16/183 (8%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ Y E G V++ C A P P + WK + I R G L+
Sbjct: 47 PVFEEQPIDT-IYPEESSDGQVSMNCRARAVPFPTYRWKLNNWDIDLTKERYSMVGGRLV 105
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
I +P D+G Y C +N+ G S + Y + PP ++ + L
Sbjct: 106 INNPEKSRDAGKYVCVVSNIFGTVRSSEATLSF---GYLDPFPPEERYEVKVREGVGAVL 162
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + +D ++ G L I N +D G Y C
Sbjct: 163 LCEPPYHYPDDLSYRWLLNEFPVFIALDKRRF----VSQTNGNLYIANVEASDKGNYSCF 218
Query: 260 VKS 262
V S
Sbjct: 219 VSS 221
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 177/493 (35%), Gaps = 51/493 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL N + + D D L I + + D Y C A+
Sbjct: 441 CKPKAAPKPKFSWSKGTELLVNGSRIRIWD-------DGSLEIINVT-KLDEGRYTCFAE 492
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + + +S + +T PL + GE + + + F+W +G +
Sbjct: 493 NN-RGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFV 551
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I + +E NG LLI V +G Y CTA + + L+V P
Sbjct: 552 IDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSASADLVVRGPPGP 611
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ ++ + L S T+ ++ +T + + + +T +I+G +
Sbjct: 612 PGGI--RVEEIRDTAVALTWSRGTDNHSPISK-YTIQSKTFLSEEWKDAKTDPSDIEGNM 668
Query: 243 LEITNASFADAGEYECVVKST----VGKISTKTTVI-VEG-PPGL-PGGVQVVEVHKTSA 295
T EYE + +T G+ S + I EG PP + P V
Sbjct: 669 ESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGGGGGSNREL 728
Query: 296 TIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W N I +K W E+ RY + E+
Sbjct: 729 TITWMLLSREYHYGNNFGYIVAFKPFGEKEWRRV------TXTNPEIGRYVHKDES---- 778
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + Y+ KV A N G G P S + + D P + P+ + ++S+SW
Sbjct: 779 -MPPSTQYQVKVKAFNNKGDG-PFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHH 836
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + I Y K+ + + +EY ++ + T Y V V A N
Sbjct: 837 VSDKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYST------KLENLKPNTRYHVDVSAFN 890
Query: 470 DVGPGPESEVVTI 482
G GP S + +
Sbjct: 891 SAGYGPPSSTIDV 903
>gi|292626879|ref|XP_697914.4| PREDICTED: contactin-4-like [Danio rerio]
Length = 1028
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/480 (30%), Positives = 232/480 (48%), Gaps = 18/480 (3%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED-QDRYFIQDNVLTIRYLNPERDPAMY 64
L W C+A P +Y W +NGE PLE +DR + + L+I L D MY
Sbjct: 336 SLLWECKASAKPKPSYRWLKNGE-------PLESFEDRIQVINGALSISSLT-LSDTGMY 387
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A+N+ +++A+LRV+ + P F L+++T A +GG+V I C P +P+ W+
Sbjct: 388 QCIAENRHGRVFANAELRVIAVAPDFSNSVLKAQTLARQGGDVLIECRPRMSPRGMISWR 447
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + R + +NG+L IS +++ D+G+Y+C A N G+ S G L+V P+
Sbjct: 448 KGKEALRESHRVSVLDNGSLRISNITKLDAGLYTCVARNQFGVASSAGTLVVKE-PTIIT 506
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
++ + ++ + C + LDV + W N I G +
Sbjct: 507 SKATQLDVTVGESVVIPCQVSRDPSLDVRFTWFFNEQLINFGSHGGYFEKVGGASAGDIM 566
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N AG Y C V++ V S T V+V GPP P ++V EV +T++ + W+ G
Sbjct: 567 IRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGPPDPPLDIRVDEVTETTSFVSWSPGPD 626
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWSTYEFKVIA 363
N P+ Y I R+ ++ W K V G +++S V L PW YEF+V+A
Sbjct: 627 NHSPVFAYNIQIRSPFSLGW------QAAKTVPESLGGQQSSARVVELSPWVEYEFRVLA 680
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N +G GEP+ PS + T P P+R+ GGGG +L I+WEP+P E+Q P Y
Sbjct: 681 TNSIGTGEPTKPSQKIRTKDTMPRITPARVSGGGGSRSELVITWEPVPEEQQAGPGFGYV 740
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ +R + + + + + S ++ + VKV N+ G GP V TI+
Sbjct: 741 VAFRPLGGQNWMQAAVTS-PDASRYIFKNDSIPPFSPFHVKVGVYNNKGEGPFGPVTTIY 799
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 123/292 (42%), Gaps = 32/292 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++T++CEA G P +Y W N ++ + RY I L I LN E D +YQ
Sbjct: 47 EVTFSCEAQGRPPPSYRWKMNDSFISPQ-----PGSRYSISGGNLRISQLNKEEDAGIYQ 101
Query: 66 CRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVW 123
C A N T S A L + L+ FK + + S EG V + C P A + F W
Sbjct: 102 CLASNSFGTILSREASLHIAYLE-EFKTQ-MRSPVRVREGQGVVLLCGPPAYMGELTFSW 159
Query: 124 --KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--- 177
+ + + RR + + GNL I+ V D G Y+C TN + +G L
Sbjct: 160 IFNEYPSFVEQDTRRFVSQKTGNLYIAKVEPSDVGNYTCVVTNTVTQNRVQGPPTPLILR 219
Query: 178 -------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLN 229
+ P Q P + +A ++L C A + ++ W +GV
Sbjct: 220 SDGIMGEYEPKIEVQFPEVLAVAKGLTVKLECFALGNPVPAIS--WRRPDGVPFPRKV-- 275
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
+++ G+LEI DAG YECV +++ GK + K + PP L
Sbjct: 276 -----DVSKSSGVLEIPYFQQEDAGPYECVAENSRGKNTGKGRLSFYAPPHL 322
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 191/514 (37%), Gaps = 80/514 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
D+ C P SW + E L + R + DN ++R N + D +Y
Sbjct: 429 DVLIECRPRMSPRGMISWRKGKEAL-------RESHRVSVLDNG-SLRISNITKLDAGLY 480
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFV 122
C A+NQ S+ L V+ + + + GE +V I C P +F
Sbjct: 481 TCVARNQFGVASSAGTL-VVKEPTIITSKATQLDVTVGE--SVVIPCQVSRDPSLDVRFT 537
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W + +I G FE G+++I + +G Y+C A S +V
Sbjct: 538 WFFNEQLINFGSHGGYFEKVGGASAGDIMIRNIQLRHAGRYTC-AVQTKVDSASIATDVV 596
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-----HNGVRIGNMDLNE- 230
+ GP PP L +R TE V+ W+ H+ V N+ +
Sbjct: 597 VRGPPD----PP---------LDIRVDEVTETTSFVS--WSPGPDNHSPVFAYNIQIRSP 641
Query: 231 -------LETPNINIDGGLLEITNASFADAGEYECVVKST--VG---------KISTKTT 272
+T ++ G + EYE V +T +G KI TK T
Sbjct: 642 FSLGWQAAKTVPESLGGQQSSARVVELSPWVEYEFRVLATNSIGTGEPTKPSQKIRTKDT 701
Query: 273 VIVEGPPGLPGGVQVVEVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
+ P + GG ++ I W P Y + R W +
Sbjct: 702 MPRITPARVSGGGG----SRSELVITWEPVPEEQQAGPGFGYVVAFRPLGGQNWMQAA-- 755
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
V + RY + ++ + P+S + KV N G G P P + ++P +AP
Sbjct: 756 VTSPDASRYIFKNDS-----IPPFSPFHVKVGVYNNKGEG-PFGPVTTIYSAEEEPSRAP 809
Query: 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 450
SRI ++ +SW+PLP + Y++ + D + ++ GN AV+
Sbjct: 810 SRIRAKSLSASEVEVSWKPLPWSTSRTRIMGYELRYWSTKDRPDTASVMRTVGNRTSAVI 869
Query: 451 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
R PS + Y +K++A N G GP+S VV +
Sbjct: 870 RGLDPS----STYNIKLKAYNSAGVGPDSAVVNV 899
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 161
+G V + C P P W++ + +G L I ++D+G Y C A
Sbjct: 242 AKGLTVKLECFALGNPVPAISWRRPDGVPFPRKVDVSKSSGVLEIPYFQQEDAGPYECVA 301
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + KGRL + P + + P + A +L C A + +Y W NG
Sbjct: 302 ENSRGKNTGKGRL-SFYAPPHLVEKPQDVQRAIDESLLWECKASAKP--KPSYRWLKNGE 358
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
+ + + I + G L I++ + +D G Y+C+ ++ G++
Sbjct: 359 PLESFE------DRIQVINGALSISSLTLSDTGMYQCIAENRHGRV 398
>gi|432859190|ref|XP_004069057.1| PREDICTED: contactin-2-like [Oryzias latipes]
Length = 1182
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 229/482 (47%), Gaps = 22/482 (4%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++L W+C + G P + W RNG+ P+ QDR + L I L + D MY
Sbjct: 489 SELLWSCLSSGKPRPSVRWLRNGQ-------PVITQDRVEVNGANLKISSLALD-DSGMY 540
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A+N+ T Y+SA+LRV P F+ P+ A GG V I C P AAPKP W
Sbjct: 541 QCVAENKHGTIYASAELRVQVQAPDFRLNPVRRLIPAARGGQVMIECRPRAAPKPILFWS 600
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ ++ + R + +G L I VSR D G Y+C A N G S G L V +
Sbjct: 601 RGTELLANSSRITVAPDGTLWIRNVSRADEGKYTCFAENYLGKANSTGHLSVRDA-TKIT 659
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---- 240
P I N+ L+C A + +D+ + W GV +DL + I G
Sbjct: 660 LAPSNADINQGENVTLQCHASHDPTMDLTFTWALKGVL---LDLEDPAGRYFRIQGQENI 716
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA + AG + C ++ V S ++V PPG PGG+ V V TS + W+
Sbjct: 717 GDLLIVNAQLSQAGIFTCTAQTVVDSASASARLVVRAPPGPPGGILVKMVTDTSVELWWS 776
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y I+ +++ +S W + E G E++ L+ W Y F+
Sbjct: 777 HGHDNHSPIGKYIIMGQSSLSSEWKKMR-----TEPANIEGNAESARVIGLMAWMDYRFQ 831
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS +GGGGG +L ++W P+ RE QN
Sbjct: 832 VIASNILGKGEPSQPSARIRTQPAAPTVAPSGLGGGGGDHHELIVTWTPMAREYQNGDGF 891
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R+K T SE + V S YT +EVK+QA N G GP S+ V
Sbjct: 892 GYILAFRRKG-TAAWSEVRIPHVESSRHVYYNQSLAPYTPFEVKIQAYNRKGVGPFSQTV 950
Query: 481 TI 482
+
Sbjct: 951 EV 952
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLI 146
P+ K R +ETYA G VT+ C P PK W+K DG + G E L++
Sbjct: 384 PTIKVR-FPAETYALTGHTVTLECFAYGNPVPKLRWRKVDGLMPSKTGSSA--EGPTLIL 440
Query: 147 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 206
+S DD G+Y C A N G D +GR+ V P + Q+ + L C +
Sbjct: 441 PDLSFDDEGVYECEAYNSEGRDTHQGRISVQAQPDWV-QVMSDSEVEISSELLWSCLSSG 499
Query: 207 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ V W NG + D + ++G L+I++ + D+G Y+CV ++ G
Sbjct: 500 KPRPSVR--WLRNGQPVITQD-------RVEVNGANLKISSLALDDSGMYQCVAENKHGT 550
Query: 267 I--STKTTVIVEGP-----------PGLPGGVQVVEVHKTSA---TIQWTDG 302
I S + V V+ P P GG ++E +A + W+ G
Sbjct: 551 IYASAELRVQVQAPDFRLNPVRRLIPAARGGQVMIECRPRAAPKPILFWSRG 602
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 118/507 (23%), Positives = 188/507 (37%), Gaps = 75/507 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C P W R ELL NS + + D L IR ++ D Y C A+
Sbjct: 587 CRPRAAPKPILFWSRGTELLANSSRITVAP-------DGTLWIRNVS-RADEGKYTCFAE 638
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
N L S+ L V +TL PS +G NVT+ C+ P F
Sbjct: 639 NYLGKANSTGHLSVRDATKITLAPS--------NADINQGENVTLQCHASHDPTMDLTFT 690
Query: 123 WKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W G ++ G R + EN G+LLI +GI++CTA V + RL+
Sbjct: 691 WALKGVLLDLEDPAGRYFRIQGQENIGDLLIVNAQLSQAGIFTCTAQTVVDSASASARLV 750
Query: 176 VLHGPSYYEQLPPK---ITIAAHRNLQLRCS-AHTEELLDVAYIWTHNGVRIGNMDLNEL 231
V P PP + + +++L S H YI G + + ++
Sbjct: 751 VRAPPG-----PPGGILVKMVTDTSVELWWSHGHDNHSPIGKYIIM--GQSSLSSEWKKM 803
Query: 232 ETPNINIDG--------GLLEITNASFADAGEYECVVKSTVGK-----ISTKTTVIVEGP 278
T NI+G GL+ + F + + + +GK S + P
Sbjct: 804 RTEPANIEGNAESARVIGLMAWMDYRF------QVIASNILGKGEPSQPSARIRTQPAAP 857
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
P G+ + WT A NG Y + R + W V
Sbjct: 858 TVAPSGLGGGGGDHHELIVTWTPMAREYQNGDGFG-YILAFRRKGTAAWSEV-------R 909
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
+ + L P++ +E K+ A N G G P S + + ++ ++P P+ I
Sbjct: 910 IPHVESSRHVYYNQSLAPYTPFEVKIQAYNRKGVG-PFSQTVEVHSAEEEPTVGPASINA 968
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 455
++ +SWEP+ + N Y+I + ++++ E ++ ++ G A R+
Sbjct: 969 TALSAFEIQVSWEPVQQLSANGILRGYEIRYWRQHEREAAADRVRTAGLEPTA--RVSGL 1026
Query: 456 FYYTEYEVKVQAINDVGPGPESEVVTI 482
T Y V V A N G GP S T+
Sbjct: 1027 RPSTRYHVAVFAYNSAGTGPSSPRTTV 1053
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 108/289 (37%), Gaps = 25/289 (8%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T +C+A P +Y W LLN +PL + + N L I P RD
Sbjct: 198 EGKVTLSCQARANPAASYRW-----LLNGTEVPLGSERHTLVAGN-LVISSPEPSRDTGS 251
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFV 122
YQC N+ T S A F +T A EG + C P P +
Sbjct: 252 YQCLVINRCGTIISRAANLKFGYLHDFSPDSRSPQT-AYEGVGTFLACQPPPHYPALSYR 310
Query: 123 WKKD---GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSC-TATNVHGMDESKGRLIVL 177
W + I GR + + +GNL ++ +D+ Y C T N+ +S
Sbjct: 311 WLINEFPNFIRADDGRWFVSQVSGNLFLAKAEPNDTANYFCFTTINLDISTKS-----TF 365
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSA-------HTEELLDVAYIWTHNGVRIGNMDLNE 230
P LP + +++R A HT L AY +R +D
Sbjct: 366 SKPIPLSVLPNANPRKSAPTIKVRFPAETYALTGHTVTLECFAYGNPVPKLRWRKVDGLM 425
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +G L + + SF D G YEC ++ G+ + + + V+ P
Sbjct: 426 PSKTGSSAEGPTLILPDLSFDDEGVYECEAYNSEGRDTHQGRISVQAQP 474
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 88 PSFKKRPLESETYAGEG---GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 144
P F++ P S EG G VT+ C A P + W +G + G R GNL
Sbjct: 181 PVFEEEP--SSLIYPEGLTEGKVTLSCQARANPAASYRWLLNGTEVPLGSERHTLVAGNL 238
Query: 145 LI-SPVSRDDSGIYSCTATNVHGMDESKG 172
+I SP D+G Y C N G S+
Sbjct: 239 VISSPEPSRDTGSYQCLVINRCGTIISRA 267
>gi|405966827|gb|EKC32064.1| Contactin [Crassostrea gigas]
Length = 794
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 239/493 (48%), Gaps = 23/493 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + LTW CEA +P+ Y W+++G L +P + I NVLTI+ L+ D
Sbjct: 62 VDIGSKLTWRCEATAMPEPVYEWYKDGVRL--VIIP----GKISIVRNVLTIQNLDIS-D 114
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N ++ QLRVL PSF K PL + GGN+T CNPEAAP P
Sbjct: 115 NGMYQCSAENIYGKSFTEGQLRVLAFPPSFVKEPLIDVMFGVVGGNITYPCNPEAAPTPT 174
Query: 121 FVWKKDG-----NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
+ W K+ N + R ++ +NGNLLI ++ D Y+C A N G S G+L
Sbjct: 175 YTWLKNNMELNLNPGDTTSRIRMLQNGNLLILNINPGDVAYYTCRAENQFGRSTSTGQLQ 234
Query: 176 VLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
+ LPP + + ++ LRC A L DV Y W N I +++ N
Sbjct: 235 I--ADKVVIGLPPVNVQVKVNQTAFLRCQASYNSLQDVIYTWLFND-EIIDINKNVYYKQ 291
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE--VHK 292
++ L +T A F +G+Y C ++T + V G P GV ++ +
Sbjct: 292 GVSQTLTGLFVTGAQFKHSGKYTCRAQTTKEHTEAWAFLTVLGNE--PAGVYAIQSSIGT 349
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV--IGKEVDRYTGRKEASIENV 350
+S + WT GA+NG I + + A + W+ +HV + V +K
Sbjct: 350 SSLRLSWTVGASNGESILFHTVEALPVMLNEWYTAVDHVSDVSSIVPGLDNKKRVVEVRG 409
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L P Y F+V + N G G S S Y T P P+ +GGG G +GDL+I+W PL
Sbjct: 410 LNPGCGYRFRVYSTNSFGVGPRSRQSDAYTTRYGPPTHPPTHVGGGYGSVGDLTITWMPL 469
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ P I Y +++R +N T+ + ++ GNVG V ++ + YY Y+V +Q ND
Sbjct: 470 EDYQLGGPGIGYHVYYR-RNLTDTWTNKVQLTGNVGKYVTQVGAYNYYLLYDVMIQPYND 528
Query: 471 VGPGPESEVVTIW 483
+G GP S V TI+
Sbjct: 529 LGQGPNSSVSTIY 541
>gi|291408742|ref|XP_002720673.1| PREDICTED: contactin 6 [Oryctolagus cuniculus]
Length = 1117
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 228/481 (47%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P Y+WF+NGE PL ++R I++ L I LN D A+YQ
Sbjct: 422 SLFWECRASGKPSPWYTWFKNGE-------PLHPEERIQIENGTLVITTLNVS-DSAVYQ 473
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ ++A+LRVL P F + P++ + GG+VTI C P A P+ W++
Sbjct: 474 CAAENKHGVISTNAELRVLASAPDFSRNPIKRHSIVHVGGDVTIECRPRAFPRATVSWRR 533
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G L I V+R D+G Y+C ATN G +LIV +
Sbjct: 534 GAEGLRQSRRLLLLEDGGLKIHNVTRSDAGPYTCLATNQFGTARDTSQLIVKER-TVITV 592
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P + + ++ L C + VA++W NG I DL T + G G
Sbjct: 593 PPSNMDVTVGESIILPCQVSRDPSTAVAFLWLFNGDLI---DLRNGATHFERVGGESAGD 649
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G Y C V++ + +S V V GPPG P GV V V TS+ I+W G
Sbjct: 650 LMIRNIQLRHSGRYLCTVQTPLESLSAAADVTVRGPPGPPEGVSVEHVSSTSSHIRWRPG 709
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + + RT ++ W +G + + +G+ + L PW YEF+V+
Sbjct: 710 PDNNSPIQIFTVQTRTPFSVGW-----QAVGTDPEILSGQTYNATVVGLSPWVEYEFRVV 764
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P P I GGGG +L ++WEP+ E Q+ Y
Sbjct: 765 AGNSIGIGEPSKPSELLRTRASVPAVPPVNIEGGGGSRSELVVTWEPIAEELQSGDGFGY 824
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + ++ + V R S + +EVKV ND G G S V +
Sbjct: 825 LVMFRPLGSTAWTKASVASVESSRF-VYRNESIAPLSPFEVKVGVYNDQGEGSLSPVSIV 883
Query: 483 W 483
+
Sbjct: 884 Y 884
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 111/292 (38%), Gaps = 28/292 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ +++ +C A G P Y W NG ++ +RY ++ L IR ++D
Sbjct: 129 SSASEVILSCAAAGYPAPHYRWRHNGTAID-----FAVSERYRLEGGSLAIRSPRTDQDA 183
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPK 120
+YQC A N L T S F+ + S EG V + C P
Sbjct: 184 GVYQCLATNLLGTTVSREARLQFAYIEDFEAK-ARSAVSVREGQGVVLLCGRPPHVGDLS 242
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG----- 172
+ W + +++ R+ F + GNL I+ V D G Y+C TN +G
Sbjct: 243 YAWAFNDSLLSVHEDRRRFISQQTGNLYIAKVQPSDVGNYTCFVTNREARRSVRGPPSPL 302
Query: 173 -----RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
++ + P + P + A +++L C A + D+++ G
Sbjct: 303 VQRADGVMGEYEPKIEVRFPDTVPAAKDSSVKLECFALGNPVPDISWRRLDGSPLPGKAR 362
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ + LLEI N D G YEC + G+ K ++ PP
Sbjct: 363 FSKSQ--------ALLEIPNFQQEDEGVYECAAGNLRGRNLAKGQLVFYAPP 406
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 30/272 (11%)
Query: 16 VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV-LTIRYLNPERDPAMYQCRAKNQLKT 74
V D++Y+W N LL+ ED+ R+ Q L I + P D Y C N+
Sbjct: 238 VGDLSYAWAFNDSLLSVH----EDRRRFISQQTGNLYIAKVQPS-DVGNYTCFVTNREAR 292
Query: 75 RYSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
R L + P + R A + +V + C P P W++
Sbjct: 293 RSVRGPPSPLVQRADGVMGEYEPKIEVR-FPDTVPAAKDSSVKLECFALGNPVPDISWRR 351
Query: 126 -DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
DG+ + G+ + ++ LL P ++D G+Y C A N+ G + +KG+L V + P +
Sbjct: 352 LDGSPLP--GKARFSKSQALLEIPNFQQEDEGVYECAAGNLRGRNLAKGQL-VFYAPPEW 408
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
EQ ++ + +L C A + Y W NG + + I I+ G L
Sbjct: 409 EQKIQNTHLSIYDSLFWECRASGKP--SPWYTWFKNGEPLHPEE-------RIQIENGTL 459
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIV 275
IT + +D+ Y+C ++ G IST + V
Sbjct: 460 VITTLNVSDSAVYQCAAENKHGVISTNAELRV 491
>gi|63329|emb|CAA68753.1| precontactin (AA -20 to 1071) [Gallus gallus]
Length = 1091
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 239/483 (49%), Gaps = 24/483 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P T W +NG L ++ LT D
Sbjct: 334 DIGSDLYWPCVATGKPIPTIRWLKNGVSFRKGELRIQG----------LTFE------DA 377
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L+++ P+F+ P++ + A +GG V I C P+AAPKPKF
Sbjct: 378 GMYQCIAENAHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKF 437
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ +G R I+++G+L I V++ D G Y+C A N G S G L + +
Sbjct: 438 SWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEA-T 496
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DG 240
P + + N ++C A + LD+ +IW+ NG I +E N+ I
Sbjct: 497 RITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSN 556
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG Y C ++ V S ++V GPPG PGG+++ E+ T+ + W+
Sbjct: 557 GELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRIEEIRDTAVALTWS 616
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI+ Y I ++T + W + E G E++ L+PW YEF+
Sbjct: 617 RGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDIEGNMESARVIDLIPWMEYEFR 671
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+IA N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 672 IIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNF 731
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + ++ + E++ T+ +G V + S T+Y+VKV+A N G GP S
Sbjct: 732 GYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGPFSLTA 790
Query: 481 TIW 483
I+
Sbjct: 791 VIY 793
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 103/279 (36%), Gaps = 50/279 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 159 DLSYRW-----LLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK- 212
Query: 77 SSAQLRVLTLKPSFKKRPLE--------SETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
S + + L P + + +TYA G NVT+ C P P+ W K
Sbjct: 213 -SVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLE 271
Query: 126 ----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG KIF + +D G+Y C A N G D+ + R+ V P
Sbjct: 272 PMPATAEISMSGAVLKIFN--------IQYEDEGLYECEAENYKGKDKHQARVYVQASPE 323
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E + +L C A + + + W NGV + G
Sbjct: 324 WVEHI-NDTEKDIGSDLYWPCVATGKPIPTIR--WLKNGV---------------SFRKG 365
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
L I +F DAG Y+C+ ++ G I + IV PP
Sbjct: 366 ELRIQGLTFEDAGMYQCIAENAHGIIYANAELKIVASPP 404
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 112/292 (38%), Gaps = 33/292 (11%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+ ++ C A VP TY W LN+ + L +DRY + L I RD
Sbjct: 49 SDGQVSMNCRARAVPFPTYKW-----KLNNWDIDL-TKDRYSMVGGRLVISNPEKSRDAG 102
Query: 63 MYQCRAKNQLKT-RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C N T R S A L L P + E + G G + C P
Sbjct: 103 KYVCVVSNIFGTVRSSEATLSFGYLDPFPPEEHYEVKVREGVGA--VLLCEPPYHYPDDL 160
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 161 SYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 220
Query: 177 LHGPSYYEQLPP-------KITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + ++ P K T A +N+ L C A + ++ + + L
Sbjct: 221 LIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRW----------SKYL 270
Query: 229 NEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ T I++ G +L+I N + D G YEC ++ GK + V V+ P
Sbjct: 271 EPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASP 322
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 178/493 (36%), Gaps = 51/493 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL N + + D D L I + + D Y C A+
Sbjct: 427 CKPKAAPKPKFSWSKGTELLVNGSRIHIWD-------DGSLEIINVT-KLDEGRYTCFAE 478
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + + +S + +T PL + GE + + + F+W +G +
Sbjct: 479 NN-RGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFV 537
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I + +E NG LLI V +G Y+CTA + + L+V P
Sbjct: 538 IDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGP 597
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ +I + L S T+ ++ +T + + + +T +I+G +
Sbjct: 598 PGGI--RIEEIRDTAVALTWSRGTDNHSPISK-YTIQSKTFLSEEWKDAKTEPSDIEGNM 654
Query: 243 LEITNASFADAGEYECVVKST----VGKISTKTTVI-VEG-PPGL-PGGVQVVEVHKTSA 295
EYE + +T G+ S + I EG PP + P V
Sbjct: 655 ESARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNREL 714
Query: 296 TIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W N I +K W V E+ RY + E+
Sbjct: 715 TITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRV------TVTNPEIGRYVHKDES---- 764
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + Y+ KV A N G G P S + + D P + P+ + ++S+SW
Sbjct: 765 -MPPSTQYQVKVKAFNSKGDG-PFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHH 822
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + I Y K+ + + +EY ++ + T Y + V A N
Sbjct: 823 VTEKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYS------TKLENLKPNTRYHIDVSAFN 876
Query: 470 DVGPGPESEVVTI 482
G GP S + I
Sbjct: 877 SAGYGPPSRTIDI 889
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 16/183 (8%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ Y E G V++ C A P P + WK + I R G L+
Sbjct: 33 PVFEEQPIDT-IYPEESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLV 91
Query: 146 IS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
IS P D+G Y C +N+ G S + Y + PP ++ + L
Sbjct: 92 ISNPEKSRDAGKYVCVVSNIFGTVRSSEATLSF---GYLDPFPPEEHYEVKVREGVGAVL 148
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + +D ++ G L I N +D G Y C
Sbjct: 149 LCEPPYHYPDDLSYRWLLNEFPVFIALDRRRF----VSQTNGNLYIANVEASDKGNYSCF 204
Query: 260 VKS 262
V S
Sbjct: 205 VSS 207
>gi|292494926|ref|NP_001004381.3| contactin-1 preproprotein [Gallus gallus]
gi|116917|sp|P14781.1|CNTN1_CHICK RecName: Full=Contactin-1; AltName: Full=Neural cell recognition
molecule F11; Flags: Precursor
gi|63385|emb|CAA33018.1| neural cell recognition protein [Gallus gallus]
Length = 1010
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 239/483 (49%), Gaps = 24/483 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P T W +NG L ++ LT D
Sbjct: 334 DIGSDLYWPCVATGKPIPTIRWLKNGVSFRKGELRIQG----------LTFE------DA 377
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L+++ P+F+ P++ + A +GG V I C P+AAPKPKF
Sbjct: 378 GMYQCIAENAHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKF 437
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ +G R I+++G+L I V++ D G Y+C A N G S G L + +
Sbjct: 438 SWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEA-T 496
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DG 240
P + + N ++C A + LD+ +IW+ NG I +E N+ I
Sbjct: 497 RITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSN 556
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG Y C ++ V S ++V GPPG PGG+++ E+ T+ + W+
Sbjct: 557 GELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRIEEIRDTAVALTWS 616
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI+ Y I ++T + W + E G E++ L+PW YEF+
Sbjct: 617 RGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDIEGNMESARVIDLIPWMEYEFR 671
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+IA N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 672 IIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNF 731
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + ++ + E++ T+ +G V + S T+Y+VKV+A N G GP S
Sbjct: 732 GYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGPFSLTA 790
Query: 481 TIW 483
I+
Sbjct: 791 VIY 793
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 103/279 (36%), Gaps = 50/279 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 159 DLSYRW-----LLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK- 212
Query: 77 SSAQLRVLTLKPSFKKRPLE--------SETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
S + + L P + + +TYA G NVT+ C P P+ W K
Sbjct: 213 -SVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLE 271
Query: 126 ----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG KIF + +D G+Y C A N G D+ + R+ V P
Sbjct: 272 PMPATAEISMSGAVLKIFN--------IQYEDEGLYECEAENYKGKDKHQARVYVQASPE 323
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E + +L C A + + + W NGV + G
Sbjct: 324 WVEHI-NDTEKDIGSDLYWPCVATGKPIPTIR--WLKNGV---------------SFRKG 365
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
L I +F DAG Y+C+ ++ G I + IV PP
Sbjct: 366 ELRIQGLTFEDAGMYQCIAENAHGIIYANAELKIVASPP 404
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 112/292 (38%), Gaps = 33/292 (11%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+ ++ C A VP TY W LN+ + L +DRY + L I RD
Sbjct: 49 SDGQVSMNCRARAVPFPTYKW-----KLNNWDIDL-TKDRYSMVGGRLVISNPEKSRDAG 102
Query: 63 MYQCRAKNQLKT-RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C N T R S A L L P + E + G G + C P
Sbjct: 103 KYVCVVSNIFGTVRSSEATLSFGYLDPFPPEEHYEVKVREGVGA--VLLCEPPYHYPDDL 160
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 161 SYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 220
Query: 177 LHGPSYYEQLPP-------KITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + ++ P K T A +N+ L C A + ++ + + L
Sbjct: 221 LIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRW----------SKYL 270
Query: 229 NEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ T I++ G +L+I N + D G YEC ++ GK + V V+ P
Sbjct: 271 EPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASP 322
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 178/493 (36%), Gaps = 51/493 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL N + + D D L I + + D Y C A+
Sbjct: 427 CKPKAAPKPKFSWSKGTELLVNGSRIHIWD-------DGSLEIINVT-KLDEGRYTCFAE 478
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + + +S + +T PL + GE + + + F+W +G +
Sbjct: 479 NN-RGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFV 537
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I + +E NG LLI V +G Y+CTA + + L+V P
Sbjct: 538 IDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGP 597
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ +I + L S T+ ++ +T + + + +T +I+G +
Sbjct: 598 PGGI--RIEEIRDTAVALTWSRGTDNHSPISK-YTIQSKTFLSEEWKDAKTEPSDIEGNM 654
Query: 243 LEITNASFADAGEYECVVKST----VGKISTKTTVI-VEG-PPGL-PGGVQVVEVHKTSA 295
EYE + +T G+ S + I EG PP + P V
Sbjct: 655 ESARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNREL 714
Query: 296 TIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W N I +K W V E+ RY + E+
Sbjct: 715 TITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRV------TVTNPEIGRYVHKDES---- 764
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + Y+ KV A N G G P S + + D P + P+ + ++S+SW
Sbjct: 765 -MPPSTQYQVKVKAFNSKGDG-PFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHH 822
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + I Y K+ + + +EY ++ + T Y + V A N
Sbjct: 823 VTEKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYST------KLENLKPNTRYHIDVSAFN 876
Query: 470 DVGPGPESEVVTI 482
G GP S + I
Sbjct: 877 SAGYGPPSRTIDI 889
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 16/183 (8%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ Y E G V++ C A P P + WK + I R G L+
Sbjct: 33 PVFEEQPIDT-IYPEESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLV 91
Query: 146 IS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
IS P D+G Y C +N+ G S + Y + PP ++ + L
Sbjct: 92 ISNPEKSRDAGKYVCVVSNIFGTVRSSEATLSF---GYLDPFPPEEHYEVKVREGVGAVL 148
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + +D ++ G L I N +D G Y C
Sbjct: 149 LCEPPYHYPDDLSYRWLLNEFPVFIALDRRRF----VSQTNGNLYIANVEASDKGNYSCF 204
Query: 260 VKS 262
V S
Sbjct: 205 VSS 207
>gi|148223930|ref|NP_001081205.1| contactin A precursor [Xenopus laevis]
gi|3219157|dbj|BAA28780.1| contactin A [Xenopus laevis]
gi|213623272|gb|AAI69517.1| Contactin A [Xenopus laevis]
Length = 1009
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 241/488 (49%), Gaps = 30/488 (6%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W+C G P + W +NG L + + LT+ D
Sbjct: 329 DIGSDLHWSCVVKGKPQPSIRWLKNGASYGKGEL----------RKSGLTLD------DA 372
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+YQC A+N Y++A+L++L L P+F+ P+ + A +GG V I C P+AAPK KF
Sbjct: 373 GIYQCIAENMHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKF 432
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ + R I+++G+L I +++ D G Y+C A N G L V +
Sbjct: 433 SWSKGTELLINNSRVSIWDDGSLEILNITKLDEGSYTCYAENDRGKANGTAVLSVT-AAT 491
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE------LETPN 235
P + N ++C+A + LD++YIW+ NG I D+ + + P
Sbjct: 492 KITLAPSNADVTVGENATMQCNASHDPTLDLSYIWSLNGFPI-EFDMEDRHYERAIRLPL 550
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I NA AG Y C ++ V S ++V GPPG PGG++V E+ TS
Sbjct: 551 QNDVGSELIIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRVEELRDTSV 610
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ W+ G N +PI+ Y I AR + W +V E G E + L+PW
Sbjct: 611 KLTWSSGTDNHQPISKYNIQARNILSDDWKDVK-----TENPNIEGYMEMARVIDLIPWM 665
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
YEF+VIA N LG GEPS PSP+ T P AP+ +GGGGG +L+++W+PL RE
Sbjct: 666 DYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTWQPLSREYH 725
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
Y + ++ N E++ + + G V + + T++++KV+A N VG GP
Sbjct: 726 YGDGFGYGVAFKPFNVREWR-KVIVSNPESGHYVHKDDTITPATQFQIKVKAFNKVGEGP 784
Query: 476 ESEVVTIW 483
S V ++
Sbjct: 785 YSSTVVVY 792
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 184/502 (36%), Gaps = 65/502 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL N+ + + D +L I L D Y C A+
Sbjct: 422 CKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSL----EILNITKL----DEGSYTCYAE 473
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG 127
N +A L V T P ++ GE N T+ CN P ++W +G
Sbjct: 474 NDRGKANGTAVLSV-TAATKITLAPSNADVTVGE--NATMQCNASHDPTLDLSYIWSLNG 530
Query: 128 NIIGSGGRRKIFENG-----------NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
I + +E L+I +G Y+CTA + + L+V
Sbjct: 531 FPIEFDMEDRHYERAIRLPLQNDVGSELIIKNAQLKHAGRYTCTAQTIVDNSSASADLVV 590
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P + ++ +++L S+ T+ ++ + I + D +++T N
Sbjct: 591 RGPPGPPGGI--RVEELRDTSVKLTWSSGTDNHQPISK-YNIQARNILSDDWKDVKTENP 647
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGG- 284
NI+G + +YE + +T+G KI T+ + P + GG
Sbjct: 648 NIEGYMEMARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGG 707
Query: 285 ----VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 340
V S + DG G + + W V V E Y
Sbjct: 708 GSNRELTVTWQPLSREYHYGDGFGYGVAFKPFNV-------REWRKVI--VSNPESGHYV 758
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
+ ++ + P + ++ KV A N++G G SS Y+ D P +AP+ +
Sbjct: 759 HK-----DDTITPATQFQIKVKAFNKVGEGPYSSTVVVYSA-EDVPTEAPTAVVYNILSS 812
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460
++S++W P+ + + Y WR ++ + ++ R+ T
Sbjct: 813 TEVSVAWHPVYEKSIEGYQVRY---WRIQDKEAAAHRVQVKAADI---TTRLEGLMPNTH 866
Query: 461 YEVKVQAINDVGPGPESEVVTI 482
Y ++V+A N G GP S +T
Sbjct: 867 YNLEVRAFNSAGDGPPSRTLTF 888
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 108/289 (37%), Gaps = 26/289 (8%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNG---ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+ ++ C A P Y W +N + LN + Y + L I + +D
Sbjct: 42 EGKVSVNCRARANPPPIYKWRKNNWEIDFLN---------EHYSLVGGNLVIHNPDKYKD 92
Query: 61 PAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAAP 117
A Y C N +S A L L P P E E EG + C+P
Sbjct: 93 SARYVCIVSNMYGKVWSREATLNFGYLDPF----PTEERYEVKVKEGTGAVLICDPPPHF 148
Query: 118 KPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
++ N I + RR + + NGNL I+ V + D G YSC ++
Sbjct: 149 PDDLNYRWLLNEFPVFISTDNRRFVTQTNGNLYIAKVEQTDRGNYSCFVSSPSVTKSVFS 208
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL- 231
+ I L + + P + T + + + + + + + I +NE
Sbjct: 209 KFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAM 268
Query: 232 -ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ I++ G +L+I N D G YEC K+ G + + V VEG P
Sbjct: 269 PASAEISMSGAVLKIFNIQPEDEGTYECEAKNIKGLDTHRAYVYVEGVP 317
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 93/267 (34%), Gaps = 48/267 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D+ Y W LLN + + +R F+ + E+ D Y C + T+
Sbjct: 151 DLNYRW-----LLNEFPVFISTDNRRFVTQTNGNLYIAKVEQTDRGNYSCFVSSPSVTKS 205
Query: 77 SSAQLRVLTLKPSFKKRPLE---------SETYAGEGGNVTIFCNPEAAPKPKFVWKK-- 125
++ L + ++P +T A + NVT+ C P P W+K
Sbjct: 206 VFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKIN 265
Query: 126 -----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I SG KIF + +D G Y C A N+ G+D + + V P
Sbjct: 266 EAMPASAEISMSGAVLKIFN--------IQPEDEGTYECEAKNIKGLDTHRAYVYVEGVP 317
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E + +L C + + W NG G EL + +D
Sbjct: 318 EWVEHI-NDTERDIGSDLHWSCVVKGKPQPSIR--WLKNGASYGK---GELRKSGLTLD- 370
Query: 241 GLLEITNASFADAGEYECVVKSTVGKI 267
DAG Y+C+ ++ G I
Sbjct: 371 -----------DAGIYQCIAENMHGII 386
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 14/182 (7%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ + E G V++ C A P P + W+K+ I GNL+
Sbjct: 25 PVFEEQPIDT-IFPEESREGKVSVNCRARANPPPIYKWRKNNWEIDFLNEHYSLVGGNLV 83
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
I +P DS Y C +N++G S+ + Y + P ++ + L
Sbjct: 84 IHNPDKYKDSARYVCIVSNMYGKVWSREATLNF---GYLDPFPTEERYEVKVKEGTGAVL 140
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
C D+ Y W N + N N G L I D G Y C V
Sbjct: 141 ICDPPPHFPDDLNYRWLLNEFPVFISTDNRRFVTQTN---GNLYIAKVEQTDRGNYSCFV 197
Query: 261 KS 262
S
Sbjct: 198 SS 199
>gi|410910446|ref|XP_003968701.1| PREDICTED: contactin-5-like [Takifugu rubripes]
Length = 1055
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 229/486 (47%), Gaps = 24/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
MD+ L W C+A G P TY W RNG LPL Q I + LTI + + D
Sbjct: 360 MDSGEKLRWECKATGRPRPTYRWLRNG-------LPLTSQSGVEILNGELTIHKVQ-QTD 411
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC +N+ YS+A+L++L P F P+ A G +V++ C P A+PKP+
Sbjct: 412 SGMYQCVGENKYGAIYSNAELKILASAPVFVDNPVW--VIATLGKDVSLDCKPRASPKPR 469
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+WK+ I R + N L I SR D G Y C A N G E L V
Sbjct: 470 ILWKRGDRRIQPNKRIMLLRNNTLRIVNSSRTDEGSYVCRADNQFGSAEMTAVLWVKDA- 528
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD----LNELETPNI 236
E P ++ + ++ L C A + LDV + W N I ++T +
Sbjct: 529 MRVELSPHRVEVTVGESVVLSCKATHDTSLDVTFQWFFNQRPITFQQDGGHFEYIQTQSS 588
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+D L I N AG Y C +++ ++ + ++V GPPG PG V V E+ +AT
Sbjct: 589 TVD---LMIRNILLRHAGRYGCRAQTSADTVTAEAELLVRGPPGPPGVVIVEEITDATAT 645
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ WT G N PI+ Y + AR+ ++ W + + D TG E+++ L PW
Sbjct: 646 LSWTRGLDNHSPISTYNLQARSPFSLGW-----QTVKTDPDPVTGDLESAMAVQLNPWVE 700
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS PS T P AP+ + GG G+ +L I WEP+ E QN
Sbjct: 701 YEFRVVATNAIGTGDPSVPSRGVRTKEAVPSVAPANVSGGNGRRHELVILWEPVSEEFQN 760
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + + R + T +EVKV N+ G GP
Sbjct: 761 GEGFGYIVAFR-ANGTRGWKEKMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNKGDGPF 819
Query: 477 SEVVTI 482
S+VV I
Sbjct: 820 SKVVII 825
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 126/319 (39%), Gaps = 35/319 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P TYSW N ++SE RY + + L I + D MYQC+A+N
Sbjct: 82 CEARGNPAPTYSWHLNQTEIDSEA-----DFRYSVVEGSLIINNASMASDYGMYQCKAEN 136
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVW--KKDG 127
T S L F ++ + EG V + C P +P+ + W +
Sbjct: 137 SFGTILSRDALLRFAYLNDFSRK-ARGDVSVREGQGVVLMCTPPPHSPEIIYSWVFNEFP 195
Query: 128 NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG--- 179
+ + RR I ++ GNL IS V D G Y C T TN + + G
Sbjct: 196 SFVAEDSRRFISQHTGNLYISKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLKTDGIMG 255
Query: 180 ---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P PP + A ++L C A + + + ++ N + +
Sbjct: 256 EYEPKIEVHFPPSVLAARGATVRLECFALGNPVPTITW---------RKINGNIPKKARL 306
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA- 295
+LEI N D+G YEC ++ G + K + V LP V+++ + +
Sbjct: 307 RKSQAVLEIPNIQLEDSGTYECKAENPRGGTAFKGHLQVY---TLPQWVRMINDTQMDSG 363
Query: 296 -TIQWTDGATNGRPITHYK 313
++W AT GRP Y+
Sbjct: 364 EKLRWECKAT-GRPRPTYR 381
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 138/371 (37%), Gaps = 54/371 (14%)
Query: 5 ADLTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
A + C A G P T +W + NG + + R VL I + E D
Sbjct: 275 ATVRLECFALGNPVPTITWRKINGNI--------PKKARLRKSQAVLEIPNIQLE-DSGT 325
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y+C+A+N L+V TL P + + + ++T G + C P+P + W
Sbjct: 326 YECKAENPRGGTAFKGHLQVYTL-PQWVR--MINDTQMDSGEKLRWECKATGRPRPTYRW 382
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
++G + S +I NG L I V + DSG+Y C N +G S L +L +
Sbjct: 383 LRNGLPLTSQSGVEIL-NGELTIHKVQQTDSGMYQCVGENKYGAIYSNAELKILASAPVF 441
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DG 240
P + +++ L C + +W RI PN I
Sbjct: 442 VDNPVWVIATLGKDVSLDCKPRASPKPRI--LWKRGDRRI---------QPNKRIMLLRN 490
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV---------- 290
L I N+S D G Y C + G + V+ + VEV
Sbjct: 491 NTLRIVNSSRTDEGSYVCRADNQFGSAEMTAVLWVKDAMRVELSPHRVEVTVGESVVLSC 550
Query: 291 ---HKTS--ATIQWTDGATNGRPIT------HYKIIARTNWNSTWFNVSEHVIGKEVDRY 339
H TS T QW N RPIT H++ I +ST + +++ + RY
Sbjct: 551 KATHDTSLDVTFQW---FFNQRPITFQQDGGHFEYIQTQ--SSTVDLMIRNILLRHAGRY 605
Query: 340 TGRKEASIENV 350
R + S + V
Sbjct: 606 GCRAQTSADTV 616
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 160/462 (34%), Gaps = 62/462 (13%)
Query: 51 TIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR--PLESETYAGEGGNV 107
T+R +N R D Y CRA NQ + +A VL +K + + P E GE +
Sbjct: 492 TLRIVNSSRTDEGSYVCRADNQFGSAEMTA---VLWVKDAMRVELSPHRVEVTVGESVVL 548
Query: 108 TIFCNPEAAPKPKFVW---KKDGNIIGSGGRRKIFENG----NLLISPVSRDDSGIYSCT 160
+ + + F W ++ GG + + +L+I + +G Y C
Sbjct: 549 SCKATHDTSLDVTFQWFFNQRPITFQQDGGHFEYIQTQSSTVDLMIRNILLRHAGRYGCR 608
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A ++ L+V P PP + I + T L + + I T+N
Sbjct: 609 AQTSADTVTAEAELLVRGPPG-----PPGVVIVEEITDATATLSWTRGLDNHSPISTYNL 663
Query: 221 VRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
L ++T + G L EYE V T I G
Sbjct: 664 QARSPFSLGWQTVKTDPDPVTGDLESAMAVQLNPWVEYEFRV--------VATNAIGTGD 715
Query: 279 PGLPG-GVQVVEVHKTSATIQWTDGATNGR---------PITH---------YKIIARTN 319
P +P GV+ E + A + G NGR P++ Y + R N
Sbjct: 716 PSVPSRGVRTKEAVPSVAPANVSGG--NGRRHELVILWEPVSEEFQNGEGFGYIVAFRAN 773
Query: 320 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 379
W + V + Y R E P + +E KV N G G P S
Sbjct: 774 GTRGW--KEKMVTSADSTMYKYRDE-----TFPPLTPFEVKVGVYNNKGDG-PFSKVVII 825
Query: 380 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 439
++ +P +APS + ++ ++W+P P P Y +W++ E +
Sbjct: 826 HSAEGEPKEAPSDVKAYSISSSEIRLTWKPSP--GPGKPKGYEVCYWKEMEQQEAGKKQR 883
Query: 440 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
I + + T Y+ V N VG GP S V+
Sbjct: 884 TVKNETTIILTGLEGN---TRYQFTVNGFNSVGQGPASAAVS 922
>gi|327271269|ref|XP_003220410.1| PREDICTED: contactin-2-like [Anolis carolinensis]
Length = 1036
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 168/487 (34%), Positives = 239/487 (49%), Gaps = 23/487 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ADL W+C A G P T W RNG PL Q+R + L I L + D
Sbjct: 334 DIGADLHWSCAAAGKPRPTIRWLRNGR-------PLTSQNRIEVNGGDLRIFKLTMD-DS 385
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC +N+ + Y+SA+L V P F+ P+ A GG + I C P+AAPK
Sbjct: 386 GMYQCVGENKHGSTYASAELYVQAFAPDFRLNPVRRLIPAARGGEIIIHCQPKAAPKANI 445
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K ++ +G R I +G L+I +S+ D G Y+C A N G S G L V +
Sbjct: 446 IWTKGTELLNNGSRITITPSGTLIIRNISKSDEGKYTCFAENFMGKANSTGTLSV-RDAT 504
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE----TPNIN 237
P I N+ L+C A + +D+ + W + + I D+++ E +
Sbjct: 505 KITLAPSSADINVGENITLKCHASHDPTMDLTFTWCLDDLLI---DISKSEGHYKRASTK 561
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
+ G L + NA AG Y C ++ V S T++V GPPG PGG+ V ++ T+ +
Sbjct: 562 ENIGDLMVLNAQLKHAGRYTCTAQTVVDSASESATLVVRGPPGPPGGLVVTDIKDTTVQL 621
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W+ G N PI Y I RT S W + E G E + L+PW Y
Sbjct: 622 SWSRGFDNHSPIAKYVIQVRTPIFSHWKQARTNPANIE-----GNSETAQVGNLIPWMDY 676
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
EF+V+A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 677 EFRVLASNILGVGEPSMPSAKIRTKEAAPTVAPSGLNGGGGAPGELIINWTPMQREYQNG 736
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y + +RK+ +++ T+ ++ V R S YT +EVK++A N G GPES
Sbjct: 737 DGFGYNLTFRKEGTQVWKTATVLGAESLHY-VYRNESIAPYTPFEVKIKAFNKKGEGPES 795
Query: 478 EVVTIWH 484
+V+I H
Sbjct: 796 -LVSIVH 801
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 126/324 (38%), Gaps = 49/324 (15%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL---- 72
P + Y WF N + D+ R+ Q D Y C A +
Sbjct: 157 PGIEYRWFVN----DFPNFISTDRRRFISQATGNLYIAKTEASDLGNYSCFATGHIDSFK 212
Query: 73 KTRYS-SAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
K+ +S S+QL ++ P+ K + S+T+A G V++ C P P+ W+K
Sbjct: 213 KSVFSTSSQLSLVREDSRPYAPTIKAK-FPSDTFALAGQLVSLECFAFGNPVPQIRWRK- 270
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ G R I L VS +D G Y C A N+ G D +GR+I+ P + + +
Sbjct: 271 --LDGGQSSRWITTEPLLEFKEVSFEDEGTYECEAENIQGKDTYRGRIIIQAQPEWLKVI 328
Query: 187 PPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
K I A +L C+A + + W NG + + + I ++GG L I
Sbjct: 329 SDKEADIGA--DLHWSCAAAGKPRPTIR--WLRNGRPLTSQN-------RIEVNGGDLRI 377
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEG-------------PPGLPGGVQVVEVHK 292
+ D+G Y+CV ++ G + V+ P GG ++
Sbjct: 378 FKLTMDDSGMYQCVGENKHGSTYASAELYVQAFAPDFRLNPVRRLIPAARGGEIIIHCQP 437
Query: 293 TS---ATIQWTDGA---TNGRPIT 310
+ A I WT G NG IT
Sbjct: 438 KAAPKANIIWTKGTELLNNGSRIT 461
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 126/330 (38%), Gaps = 50/330 (15%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
TC+A P TY W LN + +E RY + L I +D YQC A
Sbjct: 55 TCQARASPPATYRW-----KLNGTEIKIETNSRYRLNGGNLVISNPVKLKDAGFYQCVAS 109
Query: 70 NQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKK 125
N + T R + + L + ++ P+ EG V C+P P ++ W
Sbjct: 110 NSVGTVVSREAYVRFGFLQEFSTEERDPVR----GTEGWGVMFTCSPPPHFPGIEYRWFV 165
Query: 126 DG--NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTAT-NVHGMDES----KGRLIVL 177
+ N I + RR I + GNL I+ D G YSC AT ++ +S +L ++
Sbjct: 166 NDFPNFISTDRRRFISQATGNLYIAKTEASDLGNYSCFATGHIDSFKKSVFSTSSQLSLV 225
Query: 178 ------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ P+ + P A + + L C A + + + L+
Sbjct: 226 REDSRPYAPTIKAKFPSDTFALAGQLVSLECFAFGNPVPQIRW-----------RKLDGG 274
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 291
++ LLE SF D G YEC ++ GK + + +I++ P + E
Sbjct: 275 QSSRWITTEPLLEFKEVSFEDEGTYECEAENIQGKDTYRGRIIIQAQPEWLKVISDKEA- 333
Query: 292 KTSATIQWTDGAT-----------NGRPIT 310
A + W+ A NGRP+T
Sbjct: 334 DIGADLHWSCAAAGKPRPTIRWLRNGRPLT 363
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 183/492 (37%), Gaps = 55/492 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C+ P W + ELLN + R I L IR ++ + D Y C A+
Sbjct: 435 CQPKAAPKANIIWTKGTELLN-------NGSRITITPSGTLIIRNIS-KSDEGKYTCFAE 486
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
N + S+ L V +TL PS ++ GE N+T+ C+ P F
Sbjct: 487 NFMGKANSTGTLSVRDATKITLAPS------SADINVGE--NITLKCHASHDPTMDLTFT 538
Query: 123 WKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D +I G R EN G+L++ +G Y+CTA V L+
Sbjct: 539 WCLDDLLIDISKSEGHYKRASTKENIGDLMVLNAQLKHAGRYTCTAQTVVDSASESATLV 598
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
V P L +T +QL S + +A I + + T
Sbjct: 599 VRGPPGPPGGL--VVTDIKDTTVQLSWSRGFDNHSPIAKYVIQVRTPIFS-HWKQARTNP 655
Query: 236 INIDGGLLEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGPPGLPGGVQVV 288
NI+G + +YE V ++ VG+ S + I P P G+
Sbjct: 656 ANIEGNSETAQVGNLIPWMDYEFRVLASNILGVGEPSMPSAKIRTKEAAPTVAPSGLNGG 715
Query: 289 EVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
I WT NG Y + R W + V+G E Y R E+
Sbjct: 716 GGAPGELIINWTPMQREYQNGDGFG-YNLTFRKEGTQVWKTAT--VLGAESLHYVYRNES 772
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P++ +E K+ A N+ G G P S ++ ++P APS I ++ I
Sbjct: 773 -----IAPYTPFEVKIKAFNKKGEG-PESLVSIVHSAEEEPRVAPSNITVNSVMATEMDI 826
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
+W + N + Y+I + K D E ++ ++ G V A + T+Y V V
Sbjct: 827 TWNSVEDHDMNGVLLGYEIRYWKHGDKEEAADRVRTAGLVSSA--HVTDLHPNTKYHVAV 884
Query: 466 QAINDVGPGPES 477
+A N G GP S
Sbjct: 885 RAYNRAGTGPAS 896
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 79 AQLRVLTLKPSFKKRPLESETYAGEGGN---VTIFCNPEAAPKPKFVWKKDGNIIG-SGG 134
A+ V P F+++P T EG + + + C A+P + WK +G I
Sbjct: 23 AESTVRNYGPVFEEQP--RNTLFPEGSSEEQILLTCQARASPPATYRWKLNGTEIKIETN 80
Query: 135 RRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGMDESK 171
R GNL+IS PV D+G Y C A+N G S+
Sbjct: 81 SRYRLNGGNLVISNPVKLKDAGFYQCVASNSVGTVVSR 118
>gi|327272946|ref|XP_003221245.1| PREDICTED: contactin-1-like [Anolis carolinensis]
Length = 1030
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 237/482 (49%), Gaps = 24/482 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++ W C A P T W ++G +P D F D
Sbjct: 354 DLGSEFHWPCVAAAKPLPTIRWLKDG-------IPYWKGDLRFSSLK---------NEDS 397
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N YS+A+L+V+ L P+F+ P++ E A GG I C P AAP+PK
Sbjct: 398 GMYQCVAENIHGMIYSNAELKVIVLAPTFEYYPMKKEVLAARGGQAIIECKPRAAPRPKL 457
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K I+ + R +I+ +G+L I V+ D+G Y+C N G S L+ P+
Sbjct: 458 TWSKGAYILKNTTRTRIWYDGSLEILNVTAADAGNYTCFVENFKGKANSSSTLVTT-APT 516
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DG 240
+ P I + +N L+C A + LD+ +IW NG + ++ +I I +
Sbjct: 517 RIDLAPTNIDVIVGQNATLQCHALHDPSLDLTFIWLLNGYPVDVDKESDYYERSIMIKNN 576
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L + A AG Y CV ++ V + ++V GPPG PGG++V E+ TS + W+
Sbjct: 577 GELIVKYAQLRHAGRYTCVAQTIVDNATASADLVVRGPPGPPGGLKVEEIKNTSVVLTWS 636
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI++Y I +RT + W ++ + G E++ L+PW YEF+
Sbjct: 637 RGTDNHSPISNYTIQSRTFLSEYWKDMK-----TDPPLVEGNVESAKVIDLIPWMEYEFR 691
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
++A N LG GEPS PSP T P APS +GGGGG +L+I+W PLPRE N
Sbjct: 692 IMATNILGTGEPSMPSPIIQTEGSPPNVAPSEVGGGGGSNRELTITWVPLPREYHFGNNF 751
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + ++ + E++ T+ + +G V + S + Y+VKV+A N+ G GP S
Sbjct: 752 GYVVAFKSFDQKEWKRVTVPQ-PEIGRYVHKDESMPPSSRYQVKVRAFNNKGEGPFSLTA 810
Query: 481 TI 482
I
Sbjct: 811 II 812
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 114/301 (37%), Gaps = 51/301 (16%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T C A G+P TY W N ++ + ++ + + L I RD
Sbjct: 68 EGRVTMNCRARGIPTPTYKWQHNNWDIDIKMA----KEHHIMVGGNLEINNPEKSRDEGK 123
Query: 64 YQCRAKN---QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y C A N +++R ++ L ++ P++ + EG + CNP
Sbjct: 124 YVCIAYNVHGTIRSREATLNFGYLYPFTPEERHPVKVK----EGVGAVLLCNPPPHYPDD 179
Query: 121 FVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATN------------ 163
++ N I RR + + NGNL I+ V D G YSC T+
Sbjct: 180 LSYRWVLNDFPEFITLDKRRYVSQSNGNLYIAKVEASDKGNYSCFVTSNSITKSVFSSFI 239
Query: 164 --VHGMDESKGRL--IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ D SKG L I + Y L +N+ L C A + ++ +
Sbjct: 240 PLIPQADRSKGYLPDIRVKFKDIYALL--------GQNVTLECFALGNPVPEIRW----- 286
Query: 220 GVRIGNMDLNELET-PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
N L + T I++ G +L I N F D G YEC ++ GK V V+
Sbjct: 287 -----NKYLEPMPTSAEISMSGAVLRIYNIQFEDEGTYECEAENHRGKDKHSAKVYVQAY 341
Query: 279 P 279
P
Sbjct: 342 P 342
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 22/187 (11%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDG-NI-IGSGGRRKIFENGN 143
P F+++P+++ Y E G VT+ C P P + W+ + +I I I GN
Sbjct: 51 PIFEEQPIDT-VYPEESPEGRVTMNCRARGIPTPTYKWQHNNWDIDIKMAKEHHIMVGGN 109
Query: 144 LLI-SPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQ 199
L I +P D G Y C A NVHG S+ + L+ + E+ P K+ L
Sbjct: 110 LEINNPEKSRDEGKYVCIAYNVHGTIRSREATLNFGYLYPFTPEERHPVKVKEGVGAVLL 169
Query: 200 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN----INIDGGLLEITNASFADAGE 255
H + D++Y W N D E T + ++ G L I +D G
Sbjct: 170 CNPPPHYPD--DLSYRWVLN-------DFPEFITLDKRRYVSQSNGNLYIAKVEASDKGN 220
Query: 256 YECVVKS 262
Y C V S
Sbjct: 221 YSCFVTS 227
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 118/348 (33%), Gaps = 76/348 (21%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
D++Y W N + TL D+ RY Q N D Y C + T+
Sbjct: 179 DLSYRWVLN-DFPEFITL---DKRRYVSQSNGNLYIAKVEASDKGNYSCFVTSNSITKSV 234
Query: 78 SAQLRVLTLKPSFKK------RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK------ 125
+ L + K R + YA G NVT+ C P P+ W K
Sbjct: 235 FSSFIPLIPQADRSKGYLPDIRVKFKDIYALLGQNVTLECFALGNPVPEIRWNKYLEPMP 294
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
I SG +I+ + +D G Y C A N G D+ ++ V P + E
Sbjct: 295 TSAEISMSGAVLRIYN--------IQFEDEGTYECEAENHRGKDKHSAKVYVQAYPEWVE 346
Query: 185 QLPPKITIAAHRNL----QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ R+L C A + L + W +G+ D
Sbjct: 347 HIN-----DTERDLGSEFHWPCVAAAKPLPTIR--WLKDGIPYWKGD------------- 386
Query: 241 GLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGPP-----------GLPGGVQV 287
L ++ D+G Y+CV ++ G I + + VIV P GG +
Sbjct: 387 --LRFSSLKNEDSGMYQCVAENIHGMIYSNAELKVIVLAPTFEYYPMKKEVLAARGGQAI 444
Query: 288 VEVHKTSA---TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 332
+E +A + W+ GA I+ T W++ S ++
Sbjct: 445 IECKPRAAPRPKLTWSKGAY---------ILKNTTRTRIWYDGSLEIL 483
>gi|348514836|ref|XP_003444946.1| PREDICTED: contactin-3-like [Oreochromis niloticus]
Length = 1086
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 233/477 (48%), Gaps = 17/477 (3%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y+W +NG+ L SE DR ++D VL++ L D MYQC
Sbjct: 398 LYWECRANGRPKPSYTWLKNGQQLLSE-------DRIHVEDGVLSVSALT-LSDAGMYQC 449
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ Y +A+L VL P F L + A G VT+ C P+A P +WKK
Sbjct: 450 VAENKHGVIYFAAELMVLASPPDFTGNLLRALLKAKAGTTVTLECKPQAYPIASILWKKG 509
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
I + R + +G L ++ VS+ D+G Y+C A N GM + GRL+V P+ Q
Sbjct: 510 NLPIHTNDRITLSPDGTLRLANVSKSDAGSYTCFARNRFGMSSTTGRLLVTD-PTRIIQG 568
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P I ++ L C ++ +LDV++ W NG I D E G L+ I
Sbjct: 569 PVDTEIIVGESIVLPCQVASDPVLDVSFSWAFNGQLIAKGD-GHFEFVGGRTAGDLM-IR 626
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N AG+Y CVV + V +S +IV+GPP P V V EV ++A + W+ G NG
Sbjct: 627 NIQLYHAGKYICVVDTDVESLSAVAVLIVKGPPSPPDSVTVEEVTDSTAQLAWSPGRDNG 686
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PIT+Y I RT + W V + + + +D G + L W Y+F+V+A N
Sbjct: 687 SPITNYLIQTRTPFTVGWQRV--NTVPEIID---GNTLTATVVDLNAWVEYDFRVLAKNS 741
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G GEPS S + T P P +GGGGG +L I+WEP+P E QN + Y I +
Sbjct: 742 VGVGEPSPVSVKTRTEDAVPDAVPGDVGGGGGSRYELVITWEPVPEELQNGESFGYIIAF 801
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
R + + G V R S ++ + VKV N G GP S VVTI+
Sbjct: 802 RAFGEASWTHVATSAPG-ASRYVYRNDSIAPFSPFHVKVGTYNSKGQGPFSPVVTIY 857
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 113/279 (40%), Gaps = 27/279 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQL--- 72
D+TY+W + N ++ +R F+ Q L I + P D Y C N +
Sbjct: 215 DLTYAW-----IFNEYPYFVQQDNRRFVSQQTGNLYIAKVEPS-DVGNYTCVVMNSITKG 268
Query: 73 KTRYSSAQLRVLTLKPSFKKRP-----LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
K + S L + T + P A +G VT+ C P P+ W++
Sbjct: 269 KVQSSPTSLILRTDGVMGEYEPKIEVNFPDNVPAAKGSTVTLECFALGNPVPEITWRRAN 328
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ + + N L I +DD+G Y C A N G + GRL P + + +
Sbjct: 329 GVPFPSKVKMKYSNAVLEIPSFQQDDTGGYECVAENKMGKNTVSGRLAFYAKPQWVQTM- 387
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+A L C A+ +Y W NG ++ + D I+++ G+L ++
Sbjct: 388 KDTALAIEERLYWECRANGRP--KPSYTWLKNGQQLLSED-------RIHVEDGVLSVSA 438
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIV-EGPPGLPGGV 285
+ +DAG Y+CV ++ G I ++V PP G +
Sbjct: 439 LTLSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNL 477
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 130/331 (39%), Gaps = 46/331 (13%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ + T TC+A G P Y W NG L+N L L+ + R + L I L+ +D M
Sbjct: 106 EEEATLTCDAKGTPSPQYRWSLNGTLIN---LGLDRRRR--LSGGNLIISSLDRYQDVGM 160
Query: 64 YQCRAKN---QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKP 119
YQC A N + +R +S Q L FK S EG V + C P ++
Sbjct: 161 YQCMAYNTVGAILSRRASLQFAYLD---HFKVH-TRSAVSVREGQGVVLLCGTPTSSGDL 216
Query: 120 KFVW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATN--VHGMDESKGRL 174
+ W + + RR + + GNL I+ V D G Y+C N G +S
Sbjct: 217 TYAWIFNEYPYFVQQDNRRFVSQQTGNLYIAKVEPSDVGNYTCVVMNSITKGKVQSSPTS 276
Query: 175 IVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
++L + PKI + A + L C A + ++ + NGV +
Sbjct: 277 LILRTDGVMGEYEPKIEVNFPDNVPAAKGSTVTLECFALGNPVPEITWR-RANGVPFPS- 334
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
+ +LEI + D G YECV ++ +GK + + P Q
Sbjct: 335 ------KVKMKYSNAVLEIPSFQQDDTGGYECVAENKMGKNTVSGRLAFYAKP------Q 382
Query: 287 VVEVHKTSAT-----IQWTDGATNGRPITHY 312
V+ K +A + W + NGRP Y
Sbjct: 383 WVQTMKDTALAIEERLYW-ECRANGRPKPSY 412
>gi|432866116|ref|XP_004070706.1| PREDICTED: contactin-3-like [Oryzias latipes]
Length = 1038
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 233/479 (48%), Gaps = 21/479 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y+W +NG+ L S+ DR ++D VL++ L D MYQC
Sbjct: 338 LNWECRANGKPKPSYTWLKNGQQLLSD-------DRTDVEDGVLSVSMLT-LTDAGMYQC 389
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ Y +A+L VL P F L S A G VT+ C P+A P +WKK
Sbjct: 390 VAENKHGVIYFAAELMVLASPPDFTGNVLRSLLKAKAGTTVTLECKPKAYPTANILWKKG 449
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ + R + +G L ++ VS+ D+G Y+C A N GM + GRL+V P+ + Q
Sbjct: 450 NLPVQTNDRVTLSPDGTLRLANVSKSDAGSYTCFARNRFGMSSTTGRLLVTD-PTRFIQG 508
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + I ++ L C ++ +LDV++ W NG I D E G L+ I
Sbjct: 509 PVDMEIIVGESIVLPCQITSDPVLDVSFSWAFNGQLIAKGD-GHFELVGGRTAGDLM-IR 566
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N +G+Y CVV + V +S +IV+G P P V V EV ++A + W+ G NG
Sbjct: 567 NIQLYHSGKYICVVDTDVESLSAVAVLIVKGAPSPPDSVTVEEVTDSTAQLAWSPGRDNG 626
Query: 307 RPITHYKIIARTNWNSTW--FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PIT+Y I RT + W N +I +G + L W YEF+V+A
Sbjct: 627 SPITNYLIQTRTPFTVGWQRVNTVPEII-------SGNTLTATVVDLNAWVEYEFRVLAK 679
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N +G GEPS S + T P AP +GGGGG +L I+WEP+P E QN + Y I
Sbjct: 680 NSVGVGEPSPISVKTRTEDAVPDVAPGDVGGGGGSRSELVITWEPVPEELQNGESFGYII 739
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R + + G V R S ++ + VKV N G GP S VVTI+
Sbjct: 740 AFRAFGEVSWIHVATSAPG-ASRYVYRNDSIAPFSPFHVKVGTYNSKGQGPFSPVVTIY 797
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 112/279 (40%), Gaps = 27/279 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQL--- 72
D+TY+W + N ++ +R F+ Q L I + P D Y C N +
Sbjct: 155 DLTYAW-----VFNEYPYFVQQDNRRFVSQQTGNLYISKVEPS-DVGNYTCVVMNSITKG 208
Query: 73 KTRYSSAQLRVLTLKPSFKKRP-----LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
K S L + T + P A +G VT+ C P P+ W++
Sbjct: 209 KVHSSPTSLNLRTDGVMGEYEPKIEVHFSDNVPAAKGTTVTLECFALGNPVPEITWRRAN 268
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
I + + N + I +DD+G Y C A N G + + GRL P + + +
Sbjct: 269 GIPFPSKVKMKYSNAVMEIPSFQQDDAGGYECVAENKMGKNTAAGRLAFYAKPQWIQTM- 327
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+A L C A+ + +Y W NG ++ + D ++E G+L ++
Sbjct: 328 KDTALAIEERLNWECRANGKP--KPSYTWLKNGQQLLSDDRTDVE-------DGVLSVSM 378
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIV-EGPPGLPGGV 285
+ DAG Y+CV ++ G I ++V PP G V
Sbjct: 379 LTLTDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNV 417
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 112/280 (40%), Gaps = 34/280 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ + T TC+A G P Y W NG L+N L L+ + R + L I L+ +D +
Sbjct: 46 EEEATLTCDAKGTPAPQYRWSLNGTLIN---LSLDRRRR--LSGGNLIISSLDRYQDVGI 100
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKP 119
YQC A N + +R +S Q L FK S EG V + C P ++
Sbjct: 101 YQCMAYNTVGAVLSRRASLQFAYLD---HFKVH-TRSAVSVREGQGVVLLCGTPTSSGDL 156
Query: 120 KFVW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATN--VHGMDESKGRL 174
+ W + + RR + + GNL IS V D G Y+C N G S
Sbjct: 157 TYAWVFNEYPYFVQQDNRRFVSQQTGNLYISKVEPSDVGNYTCVVMNSITKGKVHSSPTS 216
Query: 175 IVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+ L + PKI + A + L C A + ++ + NG+ +
Sbjct: 217 LNLRTDGVMGEYEPKIEVHFSDNVPAAKGTTVTLECFALGNPVPEITW-RRANGIPFPS- 274
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ ++EI + DAG YECV ++ +GK
Sbjct: 275 ------KVKMKYSNAVMEIPSFQQDDAGGYECVAENKMGK 308
>gi|301606492|ref|XP_002932857.1| PREDICTED: contactin-1-like [Xenopus (Silurana) tropicalis]
Length = 1005
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/493 (33%), Positives = 237/493 (48%), Gaps = 44/493 (8%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P + W +NG Y D L R L E D
Sbjct: 329 DIGSDLHWACVAKGKPQPSIRWLKNGA-------------SYGKGD--LIKRGLTLE-DA 372
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L++L L P+F+ P+ + A +GG V I C P+AAPK KF
Sbjct: 373 GMYQCIAENMHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKF 432
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ + R I+++G+L I +++ D G Y+C A N G S G L V +
Sbjct: 433 SWSKGTELLINSSRVSIWDDGSLEILNITKLDEGSYTCFAENDRGKANSTGVLSVT-AAT 491
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + N ++C A + LD+ +IWT NG I + + E N G
Sbjct: 492 KITLAPSNADVTVGENATMQCHASHDPTLDLTFIWTLNGFPIEFDKEDGHYERAIRNDVG 551
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I NA AG Y C ++ V S ++V GPPG PGGV+V E+ TS + W+
Sbjct: 552 SELVIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIRDTSVKLTWS 611
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N +PI+ Y I A+ + W +V E G E + L+PW YEF+
Sbjct: 612 SGTDNHQPISKYNIQAKNILSEDWKDVK-----TENPNIEGNMEMARAIDLIPWMDYEFR 666
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPS PSP+ T P AP+ +GGGGG +L+++W+PL RE
Sbjct: 667 VTATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTWQPLSREYHYGDGF 726
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY----------TEYEVKVQAIND 470
Y + ++ N E++ +V P +Y T+++VKV+A N
Sbjct: 727 GYVVAFKLFNYREWRK-----------VIVTNPESGHYVHKDDTITPATQFQVKVKAFNK 775
Query: 471 VGPGPESEVVTIW 483
VG GP S V I+
Sbjct: 776 VGEGPYSSTVVIY 788
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 184/498 (36%), Gaps = 61/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL NS + + D +L I L D Y C A+
Sbjct: 422 CKPKAAPKAKFSWSKGTELLINSSRVSIWDDGSL----EILNITKL----DEGSYTCFAE 473
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
N S+ L V T P ++ GE N T+ C+ P F+W +G
Sbjct: 474 NDRGKANSTGVLSV-TAATKITLAPSNADVTVGE--NATMQCHASHDPTLDLTFIWTLNG 530
Query: 128 NIIG----SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I G + N L+I +G Y+CTA + +D S ++
Sbjct: 531 FPIEFDKEDGHYERAIRNDVGSELVIKNAQLKHAGRYTCTAQTI--VDNSSASADLVVRG 588
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
++ +++L S+ T+ ++ + I + D +++T N NI+G
Sbjct: 589 PPGPPGGVRVEEIRDTSVKLTWSSGTDNHQPISK-YNIQAKNILSEDWKDVKTENPNIEG 647
Query: 241 GLLEITNASFADAGEYECVVKST----VG-------KISTKTTVIVEGPPGLPGG----- 284
+ +YE V +T VG KI T+ + P + GG
Sbjct: 648 NMEMARAIDLIPWMDYEFRVTATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNR 707
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
V S + DG + +K+ W V E Y +
Sbjct: 708 ELTVTWQPLSREYHYGDGFGY---VVAFKLFNYREWRKVI------VTNPESGHYVHK-- 756
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
++ + P + ++ KV A N++G G SS Y+ D P +AP+ I ++S
Sbjct: 757 ---DDTITPATQFQVKVKAFNKVGEGPYSSTVVIYSA-EDVPIEAPTAIVYNILSSSEVS 812
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
++W P+ + + Y WR ++ + ++ R+ T Y ++
Sbjct: 813 VAWHPVYEKSIEGYQVRY---WRTQDKEAAAHRVQVKASDI---TTRLEGLLPDTHYNLE 866
Query: 465 VQAINDVGPGPESEVVTI 482
V+A N G GP S V+T
Sbjct: 867 VRAFNSAGDGPPSRVITF 884
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 108/298 (36%), Gaps = 44/298 (14%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNG---ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+ ++ C A P Y W RN +LLN + Y + L I + +D
Sbjct: 42 EGKVSVNCRARANPPPVYKWRRNNWEIDLLN---------EHYSLVGGNLVINNPDKYKD 92
Query: 61 PAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAAP 117
Y C N +S A L L P P E E EG + C+P
Sbjct: 93 SGKYVCIVSNMYGKVWSREANLNFGYLDPF----PTEERYEVKVKEGTGAVLICDPPPHF 148
Query: 118 KPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
++ N I RR + + NGNL I+ V + D G YSC ++
Sbjct: 149 PDDLNYRWLLNEFPVFISPDNRRFVTQANGNLYIAKVEQSDRGNYSCFVSSPSVTKSVFS 208
Query: 173 RLIVLHGPSYYEQLPPKIT-----------IAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+ I L + + P + T +N+ L C A + + + T+ +
Sbjct: 209 KFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPIPVITWRKTNEAM 268
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ I++ G +L+I N D G YEC K+ G + K V VEG P
Sbjct: 269 P---------ASAEISMSGAVLKIFNIQPEDEGTYECEAKNIKGMDTHKAYVYVEGVP 317
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 95/267 (35%), Gaps = 48/267 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D+ Y W LLN + + +R F+ + E+ D Y C + T+
Sbjct: 151 DLNYRW-----LLNEFPVFISPDNRRFVTQANGNLYIAKVEQSDRGNYSCFVSSPSVTKS 205
Query: 77 SSAQLRVLTLKPSFKKRPLE---------SETYAGEGGNVTIFCNPEAAPKPKFVWKK-- 125
++ L + ++P +T A + NVT+ C P P W+K
Sbjct: 206 VFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPIPVITWRKTN 265
Query: 126 -----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I SG KIF + +D G Y C A N+ GMD K + V P
Sbjct: 266 EAMPASAEISMSGAVLKIFN--------IQPEDEGTYECEAKNIKGMDTHKAYVYVEGVP 317
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E + +L C A + + W NG G DL I
Sbjct: 318 EWVEHI-NDTERDIGSDLHWACVAKGKPQPSIR--WLKNGASYGKGDL---------IKR 365
Query: 241 GLLEITNASFADAGEYECVVKSTVGKI 267
GL + DAG Y+C+ ++ G I
Sbjct: 366 GL------TLEDAGMYQCIAENMHGII 386
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 71/182 (39%), Gaps = 14/182 (7%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ + E G V++ C A P P + W+++ I GNL+
Sbjct: 25 PVFEEQPIDT-IFPEESMEGKVSVNCRARANPPPVYKWRRNNWEIDLLNEHYSLVGGNLV 83
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
I +P DSG Y C +N++G S+ + Y + P ++ + L
Sbjct: 84 INNPDKYKDSGKYVCIVSNMYGKVWSREANLNF---GYLDPFPTEERYEVKVKEGTGAVL 140
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
C D+ Y W N + N N G L I +D G Y C V
Sbjct: 141 ICDPPPHFPDDLNYRWLLNEFPVFISPDNRRFVTQAN---GNLYIAKVEQSDRGNYSCFV 197
Query: 261 KS 262
S
Sbjct: 198 SS 199
>gi|147898733|ref|NP_001079338.1| contactin 1 precursor [Xenopus laevis]
gi|1843425|dbj|BAA13100.1| contactin/F3/F11 [Xenopus laevis]
Length = 1005
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 240/493 (48%), Gaps = 44/493 (8%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P + W ++G P D I LT+ D
Sbjct: 329 DIGSDLHWACVARGKPQPSIRWLKDGA-------PYGKGD---IIKKGLTLE------DA 372
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L++L L P+F+ P+ + A +GG V I C P+AAPK KF
Sbjct: 373 GMYQCIAENIHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKF 432
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ + R I+++G+L I+ +++ D G Y+C A N G S G ++ + +
Sbjct: 433 SWSKGTELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKANSTG-IVSVTAAT 491
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + N ++C A + L++ +IW NG I + + E N+ G
Sbjct: 492 KITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNGFPIEFDKEDGHYERAIRNVVG 551
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I NA AG Y C ++ V S ++V GPPG PGGV+V E+ TS + W+
Sbjct: 552 SELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIRDTSVKLTWS 611
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N +PI+ Y I A+ + W +V E G E + L+PW YEF+
Sbjct: 612 SGTDNHQPISKYNIQAQNILSEDWKDVK-----TENPNIEGNMEMARVIDLIPWMDYEFR 666
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PSP+ T P AP+ +GGGGG +L+I+W+PL RE
Sbjct: 667 VIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSREYHYGDGF 726
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY----------TEYEVKVQAIND 470
Y + ++ N E++ +V P +Y T+++VKV+A N
Sbjct: 727 GYGVAFKPFNGREWRK-----------VIVTNPESGHYVHKDDTITPATQFQVKVKAFNK 775
Query: 471 VGPGPESEVVTIW 483
+G GP S V ++
Sbjct: 776 IGEGPYSSTVVVY 788
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 101/498 (20%), Positives = 187/498 (37%), Gaps = 61/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL N+ + + D D L I + + D Y C A+
Sbjct: 422 CKPKAAPKAKFSWSKGTELLINNSRVSIWD-------DGSLEITNIT-KFDEGSYTCFAE 473
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
N + + +S + +T P ++ GE N T+ C+ P + F+W +G
Sbjct: 474 ND-RGKANSTGIVSVTAATKITLAPSNADVTVGE--NATMQCHASHDPTLELTFIWALNG 530
Query: 128 NIIG----SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I G + N L+I +G Y+CTA + +D S ++
Sbjct: 531 FPIEFDKEDGHYERAIRNVVGSELVIKNAQLIHAGRYTCTAQTI--VDNSSASADLVVRG 588
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
++ +++L S+ T+ ++ + I + D +++T N NI+G
Sbjct: 589 PPGPPGGVRVEEIRDTSVKLTWSSGTDNHQPISK-YNIQAQNILSEDWKDVKTENPNIEG 647
Query: 241 GLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGG----- 284
+ +YE + +T+G KI T+ + P + GG
Sbjct: 648 NMEMARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNR 707
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
+ S + DG G +K W V E Y +
Sbjct: 708 ELTITWQPLSREYHYGDGFGYG---VAFKPFNGREWRKVI------VTNPESGHYVHK-- 756
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
++ + P + ++ KV A N++G G SS Y+ D P +AP+ + ++S
Sbjct: 757 ---DDTITPATQFQVKVKAFNKIGEGPYSSTVVVYSA-EDVPTEAPTAVVYNILSSSEVS 812
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
++W P+ + + Y WR ++ + ++ R+ T Y ++
Sbjct: 813 VAWHPVYEKSIEGYQVRY---WRIQDKEAAAHRVQVKASDI---TTRLEGLMPNTHYNIE 866
Query: 465 VQAINDVGPGPESEVVTI 482
V+A N G GP S+ +T
Sbjct: 867 VRAFNSAGDGPPSKTLTF 884
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 108/289 (37%), Gaps = 26/289 (8%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNG---ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+ ++ C A G P Y W +N +LLN + Y + L I + +D
Sbjct: 42 EGKVSVNCRARGNPPPIYKWRKNNLEIDLLN---------EHYSLVGGNLVINNPDKYKD 92
Query: 61 PAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAAP 117
Y C N +S A L L P P E E EG + C+P
Sbjct: 93 SGRYVCIVSNIYGKVWSREATLNFGYLDPF----PTEERYEVKVKEGTGAVLICDPPPHV 148
Query: 118 KPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
++ N + RR + + NGNL I+ V D G YSC ++
Sbjct: 149 PDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSPSVTKSVFS 208
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL- 231
+ I L + + P + T + + + + + + + I +NE
Sbjct: 209 KFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAM 268
Query: 232 -ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +I++ G +L+I N D G YEC K+ G + + V VEG P
Sbjct: 269 PASADISMSGAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVYVEGVP 317
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 95/267 (35%), Gaps = 48/267 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D+ Y W LLN + L +R F+ + E D Y C + T+
Sbjct: 151 DLNYRW-----LLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSPSVTKS 205
Query: 77 SSAQLRVLTLKPSFKKRPLE---------SETYAGEGGNVTIFCNPEAAPKPKFVWKK-- 125
++ L + ++P +T A + NVT+ C P P W+K
Sbjct: 206 VFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKIN 265
Query: 126 -----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+I SG KIF V +D G Y C A N+ G+D + + V P
Sbjct: 266 EAMPASADISMSGAVLKIFN--------VQPEDEGTYECEAKNIKGLDNHRAYVYVEGVP 317
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E + +L C A + + W +G G D+ I
Sbjct: 318 EWVEHI-NDTERDIGSDLHWACVARGKPQPSIR--WLKDGAPYGKGDI---------IKK 365
Query: 241 GLLEITNASFADAGEYECVVKSTVGKI 267
GL + DAG Y+C+ ++ G I
Sbjct: 366 GL------TLEDAGMYQCIAENIHGII 386
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 14/182 (7%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ + E G V++ C P P + W+K+ I GNL+
Sbjct: 25 PVFEEQPIDT-IFPEESTEGKVSVNCRARGNPPPIYKWRKNNLEIDLLNEHYSLVGGNLV 83
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
I +P DSG Y C +N++G S+ + Y + P ++ + L
Sbjct: 84 INNPDKYKDSGRYVCIVSNIYGKVWSREATLNF---GYLDPFPTEERYEVKVKEGTGAVL 140
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
C D+ Y W N + N N G L I D G Y C V
Sbjct: 141 ICDPPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTN---GNLYIAKVEHLDRGNYSCFV 197
Query: 261 KS 262
S
Sbjct: 198 SS 199
>gi|213625300|gb|AAI70294.1| Contactin/F3/F11 [Xenopus laevis]
Length = 1005
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 240/493 (48%), Gaps = 44/493 (8%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P + W ++G P D I LT+ D
Sbjct: 329 DIGSDLHWACVARGKPQPSIRWLKDGA-------PYGKGD---IIKRGLTLE------DA 372
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L++L L P+F+ P+ + A +GG V I C P+AAPK KF
Sbjct: 373 GMYQCIAENIHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKF 432
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ + R I+++G+L I+ +++ D G Y+C A N G S G ++ + +
Sbjct: 433 SWSKGTELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKANSTG-IVSVTAAT 491
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + N ++C A + L++ +IW NG I + + E N+ G
Sbjct: 492 KITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNGFPIEFDKEDGHYERAIRNVVG 551
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I NA AG Y C ++ V S ++V GPPG PGGV+V E+ TS + W+
Sbjct: 552 SELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEEIRDTSVKLTWS 611
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N +PI+ Y I A+ + W +V E G E + L+PW YEF+
Sbjct: 612 SGTDNHQPISKYNIQAQNILSEDWKDVK-----TENPNIEGNMEMARVIDLIPWMDYEFR 666
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PSP+ T P AP+ +GGGGG +L+I+W+PL RE
Sbjct: 667 VIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSREYHYGDGF 726
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY----------TEYEVKVQAIND 470
Y + ++ N E++ +V P +Y T+++VKV+A N
Sbjct: 727 GYGVAFKPFNGREWRK-----------VIVTNPESGHYVHKDDTITPATQFQVKVKAFNK 775
Query: 471 VGPGPESEVVTIW 483
+G GP S V ++
Sbjct: 776 IGEGPYSSTVVVY 788
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 101/498 (20%), Positives = 187/498 (37%), Gaps = 61/498 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL N+ + + D D L I + + D Y C A+
Sbjct: 422 CKPKAAPKAKFSWSKGTELLINNSRVSIWD-------DGSLEITNIT-KFDEGSYTCFAE 473
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
N + + +S + +T P ++ GE N T+ C+ P + F+W +G
Sbjct: 474 ND-RGKANSTGIVSVTAATKITLAPSNADVTVGE--NATMQCHASHDPTLELTFIWALNG 530
Query: 128 NIIG----SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I G + N L+I +G Y+CTA + +D S ++
Sbjct: 531 FPIEFDKEDGHYERAIRNVVGSELVIKNAQLIHAGRYTCTAQTI--VDNSSASADLVVRG 588
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
++ +++L S+ T+ ++ + I + D +++T N NI+G
Sbjct: 589 PPGPPGGVRVEEIRDTSVKLTWSSGTDNHQPISK-YNIQAQNILSEDWKDVKTENPNIEG 647
Query: 241 GLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGG----- 284
+ +YE + +T+G KI T+ + P + GG
Sbjct: 648 NMEMARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNR 707
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
+ S + DG G +K W V E Y +
Sbjct: 708 ELTITWQPLSREYHYGDGFGYG---VAFKPFNGREWRKVI------VTNPESGHYVHK-- 756
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
++ + P + ++ KV A N++G G SS Y+ D P +AP+ + ++S
Sbjct: 757 ---DDTITPATQFQVKVKAFNKIGEGPYSSTVVVYSA-EDVPTEAPTAVVYNILSSSEVS 812
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
++W P+ + + Y WR ++ + ++ R+ T Y ++
Sbjct: 813 VAWHPVYEKSIEGYQVRY---WRIQDKEAAAHRVQVKASDI---TTRLEGLMPNTHYNIE 866
Query: 465 VQAINDVGPGPESEVVTI 482
V+A N G GP S+ +T
Sbjct: 867 VRAFNSAGDGPPSKTLTF 884
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 94/267 (35%), Gaps = 48/267 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D+ Y W LLN + L +R F+ + E D Y C + T+
Sbjct: 151 DLNYRW-----LLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSPSVTKS 205
Query: 77 SSAQLRVLTLKPSFKKRPLE---------SETYAGEGGNVTIFCNPEAAPKPKFVWKK-- 125
++ L + ++P +T A + NVT+ C P P W+K
Sbjct: 206 VFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKIN 265
Query: 126 -----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I SG KIF V +D G Y C A N+ G+D + + V P
Sbjct: 266 EAMPASAEISMSGAVLKIFN--------VQPEDEGTYECEAKNIKGLDNHRAYVYVEGVP 317
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ E + +L C A + + W +G G D+ I
Sbjct: 318 EWVEHI-NDTERDIGSDLHWACVARGKPQPSIR--WLKDGAPYGKGDI---------IKR 365
Query: 241 GLLEITNASFADAGEYECVVKSTVGKI 267
GL + DAG Y+C+ ++ G I
Sbjct: 366 GL------TLEDAGMYQCIAENIHGII 386
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 106/289 (36%), Gaps = 26/289 (8%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNG---ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+ ++ C A P Y W +N +LLN + Y + L I + +D
Sbjct: 42 EGKVSVNCRARANPPPIYKWRKNNLEIDLLN---------EHYSLVGGNLVINNPDKYKD 92
Query: 61 PAMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAAP 117
Y C N +S A L L P P E E EG + C+P
Sbjct: 93 SGRYVCIVSNIYGKVWSREATLNFGYLDPF----PTEERYEVKVKEGTGAVLICDPPPHV 148
Query: 118 KPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
++ N + RR + + NGNL I+ V D G YSC ++
Sbjct: 149 PDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNYSCFVSSPSVTKSVFS 208
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL- 231
+ I L + + P + T + + + + + + + I +NE
Sbjct: 209 KFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALGNPVPVITWRKINEAM 268
Query: 232 -ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ I++ G +L+I N D G YEC K+ G + + V VEG P
Sbjct: 269 PASAEISMSGAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVYVEGVP 317
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 14/182 (7%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ + E G V++ C A P P + W+K+ I GNL+
Sbjct: 25 PVFEEQPIDT-IFPEESTEGKVSVNCRARANPPPIYKWRKNNLEIDLLNEHYSLVGGNLV 83
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
I +P DSG Y C +N++G S+ + Y + P ++ + L
Sbjct: 84 INNPDKYKDSGRYVCIVSNIYGKVWSREATLNF---GYLDPFPTEERYEVKVKEGTGAVL 140
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
C D+ Y W N + N N G L I D G Y C V
Sbjct: 141 ICDPPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTN---GNLYIAKVEHLDRGNYSCFV 197
Query: 261 KS 262
S
Sbjct: 198 SS 199
>gi|410899605|ref|XP_003963287.1| PREDICTED: contactin-3-like [Takifugu rubripes]
Length = 1067
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 231/477 (48%), Gaps = 17/477 (3%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y+W +NG+ L S DR + D VL++ L D MYQC
Sbjct: 338 LHWECRANGKPKPSYTWLKNGQQLLS-------GDRITVVDGVLSVSAL-ALSDAGMYQC 389
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ Y +A+L VL P F L + A G VT+ C P+A P +WKK
Sbjct: 390 VAENKHGVIYFAAELMVLASPPDFTGNVLRALLKAKAGTTVTLECKPQAYPVASILWKKG 449
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
I R + +G L ++ VS+ D+G Y+C A N GM + GRL+V P+ Q
Sbjct: 450 NLPIHINDRVTLSPDGTLRLANVSKSDAGGYTCFARNRFGMSSTTGRLLVTD-PTRITQG 508
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + I ++ L C ++ +LDV++ W NG I D E G L+ I
Sbjct: 509 PVDMEIIVGESIVLPCQVASDPVLDVSFSWAFNGQLIAKGD-GHFELVGGRTAGDLM-IR 566
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N AG+Y CVV + V +S +IV+GPP P V V EV ++A + W+ G NG
Sbjct: 567 NIQLYHAGKYICVVDTDVESLSAVAILIVKGPPSPPDSVTVEEVTDSTAQLAWSRGRDNG 626
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PI +Y I RT + W V + + + +D G + L W YEF+V+A N
Sbjct: 627 SPIANYFIQTRTPFTVGWQRV--NTVPEIID---GNTLTATVVDLNAWVEYEFRVLARNS 681
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G GEPS S + T P AP +GGGGG +L I+WEP+P E QN + Y I +
Sbjct: 682 VGVGEPSPVSVRTRTEDAVPDAAPGDVGGGGGSRSELVITWEPVPEELQNGESFGYIIAF 741
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
R + + G V R S ++ + VKV N G GP S VVTI+
Sbjct: 742 RAFGEVSWTHVATSAPG-ASRYVYRNDSIAPFSPFHVKVGTYNSKGQGPFSPVVTIY 797
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 27/279 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTR 75
D+TY+W + N ++ +R F+ Q L + + P D Y C N +
Sbjct: 155 DLTYAW-----VFNEYPYFVQQDNRRFVSQQTGNLYVAKVEPS-DVGNYTCVVTNSVTKG 208
Query: 76 YSSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ L LK E + A G VT+ C P P+ WK+
Sbjct: 209 KVHSSPTALILKTDGVMGEYEPKIEVNFPDNVSAARGSTVTLECFALGNPVPEITWKRAN 268
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ + + N L I +DD+G Y C A N G + + GRL P + + +
Sbjct: 269 GVPFPSKVKMKYSNAVLEIPSFQQDDTGGYECVAENRMGKNTATGRLAFYAKPQWIQAV- 327
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+A L C A+ + +Y W NG ++ + D I + G+L ++
Sbjct: 328 KDAALAIEERLHWECRANGKP--KPSYTWLKNGQQLLSGD-------RITVVDGVLSVSA 378
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIV-EGPPGLPGGV 285
+ +DAG Y+CV ++ G I ++V PP G V
Sbjct: 379 LALSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNV 417
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 114/280 (40%), Gaps = 34/280 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ + T TC+A GVP Y W NG L+N L L+ + R + L I L+ +D M
Sbjct: 46 EEEATLTCDAKGVPPPQYRWSLNGTLIN---LGLDRRRR--LSGGNLIISSLDRYQDVGM 100
Query: 64 YQCRAKN---QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKP 119
YQC A N + +R +S Q L FK S EG V + C P ++
Sbjct: 101 YQCMAFNAAGAILSRRASLQFAYLD---HFKVH-TRSAVSVREGQGVVLLCGTPTSSGDL 156
Query: 120 KFVW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATN--VHGMDESKGRL 174
+ W + + RR + + GNL ++ V D G Y+C TN G S
Sbjct: 157 TYAWVFNEYPYFVQQDNRRFVSQQTGNLYVAKVEPSDVGNYTCVVTNSVTKGKVHSSPTA 216
Query: 175 IVL--------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
++L + P P ++ A + L C A + ++ + NGV +
Sbjct: 217 LILKTDGVMGEYEPKIEVNFPDNVSAARGSTVTLECFALGNPVPEITWK-RANGVPFPS- 274
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ +LEI + D G YECV ++ +GK
Sbjct: 275 ------KVKMKYSNAVLEIPSFQQDDTGGYECVAENRMGK 308
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 81/219 (36%), Gaps = 44/219 (20%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII-------------ARTNWNSTW 324
P G+P GV V + + W + + + Y+++ R WN T
Sbjct: 803 PSGMPAGVWARSVSASEIEVNWQALSYSPERVLGYEVVYWEDDTKPETMGKVRVPWNQTV 862
Query: 325 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 384
VS L + + V A N G G P P+ T
Sbjct: 863 VTVSG---------------------LAANTQFFLTVSAFNTAGTG-PFLPAINVTTKKP 900
Query: 385 KPYQAPSRIGGGGGKIGD-LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 443
P Q P I IG LS+ WEP+ + + YK+ +R++ E + T
Sbjct: 901 PPAQPPMNI--EWTLIGSQLSLYWEPVAATESESEVTGYKLSYRRQRHKEVNALTTAN-- 956
Query: 444 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
A + +P E +Y +++Q +++ G GP SE + +
Sbjct: 957 --STAELTLPEE--EEDYVIRIQTLSEGGLGPASEPIRV 991
>gi|301613550|ref|XP_002936273.1| PREDICTED: contactin-2-like [Xenopus (Silurana) tropicalis]
Length = 990
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 237/480 (49%), Gaps = 16/480 (3%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+DL W+C A G P T W R+G+ PL Q I + + L+ D MY
Sbjct: 334 SDLLWSCAASGKPRPTIRWLRDGK-------PLMTQVNIEITNGQIKFTSLS-LHDSGMY 385
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A+N+ T Y++A+L V L P F+ P++ A GG V I CNP AAP P +W
Sbjct: 386 QCVAENKHGTIYTTAELTVQALAPDFRLSPVKRLIPAARGGEVIIQCNPRAAPTPLILWS 445
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K ++ + R + NG L++ +SR D G Y+C A N+ G S G L V +
Sbjct: 446 KGTELLFNSSRVTVTANGTLILRNISRSDEGKYTCFAENIMGKSNSTGVLSVREA-TKIT 504
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLL 243
P I ++ L+C A + +D+ + WT NG+ I + +++ G L
Sbjct: 505 LAPSGSDINQGDSITLQCHASHDPSMDLTFTWTLNGIPIDFEKEAQNYRRTSMDEAVGDL 564
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I NA AG+Y C+ ++ V + S ++++ GPPG PGGV V V +T + W+ G
Sbjct: 565 HIINAQLRHAGKYTCMAQTVVDRTSAMASLLIRGPPGPPGGVVVKYVGETMVQLSWSRGF 624
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI+ Y + R W + E G E+++ L W+ Y F+++A
Sbjct: 625 DNHSPISRYVVQVREPLTEIWRSARTDPPTVE-----GNAESALVVGLNQWTDYLFRIVA 679
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N LG G+PS+PS T P APS +GGGGG +L+I+W P+ R+ QN + Y
Sbjct: 680 SNILGDGDPSAPSALIRTREAAPNVAPSEVGGGGGAPNELTINWTPIGRQYQNGDDFGYI 739
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
I +++KN+ + + + G V R S YT ++VK+Q N G GP S T++
Sbjct: 740 IAFKRKNENTWLTVRVPG-GQSQQYVYRNESIAAYTPFDVKIQGYNKKGEGPFSRDTTVY 798
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 35/275 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQD---NVLTIRYLNPERDPAMYQCRAKNQL- 72
P ++Y W LLN L +R F+ N+ + + + D Y C + +
Sbjct: 153 PGLSYRW-----LLNEFPTFLNTDNRRFVSQVTGNLYVAQTV--KEDEGAYSCLTTSHIS 205
Query: 73 ---KTRYSS-------AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
K+ YSS ++++ T PS K R ETYA G V + C P P
Sbjct: 206 FTTKSVYSSFTQLNVNSEVKPRTYAPSIKVR-FPGETYALYGQAVFLECFAFGNPVPHIR 264
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
W+K + G+ R + + L ++ ++ G Y C A N G +GR+IV P +
Sbjct: 265 WRK---VDGTLPPRLLVIDPVLHFPSITFEEDGTYECEAVNSEGSTTHQGRVIVQAQPEW 321
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ +L C+A + + ++ R G + ++ NI I G
Sbjct: 322 LHVI-TDTEAKIGSDLLWSCAASGKPRPTIRWL------RDGKPLMTQV---NIEITNGQ 371
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
++ T+ S D+G Y+CV ++ G I T + V+
Sbjct: 372 IKFTSLSLHDSGMYQCVAENKHGTIYTTAELTVQA 406
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 39/295 (13%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T C A P TY W NG LN L Y + L I +
Sbjct: 45 EEQVTLPCRARASPSATYRWQLNGTELN-----LTADPSYRLVGGNLAISGPTQSKHAGT 99
Query: 64 YQCRAKNQLKTRYSS-AQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNP-EAAPKP 119
YQC A N T SS A LR L+ P+ ++ ++ EG V + CNP + P
Sbjct: 100 YQCIASNPKGTVLSSEASLRFGYLQEFPAEQRDTVK----VTEGWGVMLACNPPKHYPGL 155
Query: 120 KFVWKKDG--NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATN-----VHGMDESK 171
+ W + + + RR + + GNL ++ ++D G YSC T+ + S
Sbjct: 156 SYRWLLNEFPTFLNTDNRRFVSQVTGNLYVAQTVKEDEGAYSCLTTSHISFTTKSVYSSF 215
Query: 172 GRLIV-------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+L V + PS + P + + + L C A + + +
Sbjct: 216 TQLNVNSEVKPRTYAPSIKVRFPGETYALYGQAVFLECFAFGNPVPHIRW---------- 265
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ P + + +L + +F + G YEC ++ G + + VIV+ P
Sbjct: 266 -RKVDGTLPPRLLVIDPVLHFPSITFEEDGTYECEAVNSEGSTTHQGRVIVQAQP 319
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 16/190 (8%)
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
TI WT NG + R N N TW V V G + +Y R E+ +
Sbjct: 720 TINWTPIGRQYQNGDDFGYIIAFKRKNEN-TWLTV--RVPGGQSQQYVYRNES-----IA 771
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
++ ++ K+ N+ G G S + Y+ ++P PS + D+ ++W P+
Sbjct: 772 AYTPFDVKIQGYNKKGEGPFSRDTTVYSA-EEEPRMFPSEVKATAISSSDIEVAWNPV-- 828
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ + Y+I + K +D E ++ ++ G A + S T Y V V+ N G
Sbjct: 829 QTLKGVLLGYEIRYWKTSDKEAAADRVRSAGMATTA--HVTSLKPDTTYYVTVRVYNQAG 886
Query: 473 PGPESEVVTI 482
GP S +
Sbjct: 887 TGPSSPATNV 896
>gi|426239383|ref|XP_004013601.1| PREDICTED: contactin-2 [Ovis aries]
Length = 1024
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 229/480 (47%), Gaps = 16/480 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P W G +++ Q R + L L+ E D
Sbjct: 330 DIGSDLHWACAAAGKPRPAVRWXXXGAGVSA-------QARVEVLAGDLRFSKLSLE-DS 381
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG V I C P AAPK
Sbjct: 382 GMYQCVAENKHGTIYASAELAVPALAPDFRLNPVRRLIPAARGGEVVIPCQPRAAPKAVV 441
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 442 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGTLSVRDA-T 500
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDG 240
P I NL L+C A + +D+ ++WT + I + + ++
Sbjct: 501 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDSDKPGGHYQRASMKETV 560
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I +A G+Y C ++ V S + TV+V GPPG PGGV V ++ TS + W+
Sbjct: 561 GDLTILSAQLRHGGKYTCTAQTVVDSASREATVLVRGPPGAPGGVVVRDISDTSVQLSWS 620
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + E G E + L PW YEF+
Sbjct: 621 RGFDNHSPIAKYTLQARTLPSGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 675
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L+++W P+ RE Q +
Sbjct: 676 VLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPVSREYQRGGGL 735
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ +R++ T +Q+ + + V S YT +EVK+++ N G GPES V
Sbjct: 736 GSLVSFRRQGSTSWQTARVPG-ADAQYFVYSNDSVRPYTPFEVKIRSYNRRGEGPESLVA 794
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 87/216 (40%), Gaps = 27/216 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG + LE R + L I + +D +YQC
Sbjct: 57 VTLACRARASPPATYRWKMNGTDMK-----LEPGSRQQLVGGNLVIMNPSKAQDAGVYQC 111
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 112 LASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 169
Query: 124 -KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 170 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 227
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSA 204
L PS + P + + + L C A
Sbjct: 228 NLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFA 263
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 87/215 (40%), Gaps = 39/215 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NI 129
+SSA T P F+++PL E T VT+ C A+P + WK +G ++
Sbjct: 25 WSSAWGSPATFGPVFEEQPLGLLFPEESTEE----KVTLACRARASPPATYRWKMNGTDM 80
Query: 130 IGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQ 185
G R+ GNL+I +P D+G+Y C A+N G E+ R L S E+
Sbjct: 81 KLEPGSRQQLVGGNLVIMNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEER 140
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG---- 240
P K L AH L +Y W N E PN I DG
Sbjct: 141 DPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFV 185
Query: 241 ----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 186 SQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|351700526|gb|EHB03445.1| Contactin-2, partial [Heterocephalus glaber]
Length = 1024
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 236/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D A+L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 323 DIGANLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVSAGDLRFSKLSLE-DS 374
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 375 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIACQPRAAPKATV 434
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 435 LWSKGTEILVNSSRLTVTPDGTLVIRNISRSDEGRYTCFAENFMGKANSTGVLSVRDA-T 493
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + ++
Sbjct: 494 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASVKETV 553
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I +A G YEC+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 554 GDLTILSAQLRHGGTYECMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 613
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 614 RGFDNHSPIAKYTLQARTRPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 668
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS +GGGGG G+L ++W P+ RE QN
Sbjct: 669 VLASNILGTGEPSGPSSRIRTKEAVPSVAPSGLGGGGGAPGELIVNWTPMSREYQNGDGF 728
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 729 GYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNESIRPYTPFEVKIRSYNRRGDGPESLTA 787
Query: 481 TIW 483
T++
Sbjct: 788 TVY 790
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 34/274 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 146 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 199
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 200 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 258
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 259 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSRGRDTVQGRIIVQAQPEWLK 315
Query: 185 QLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ + I A NL+ C+A + V W NG + + + + + G L
Sbjct: 316 VISDTEADIGA--NLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVSAGDL 364
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 365 RFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 398
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 113/293 (38%), Gaps = 36/293 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T C A P TY W NG +N L R+ + L I +D +
Sbjct: 38 EEQVTLVCRARASPPATYRWKMNGTEMN-----LGLGSRHQLVGGNLVIMNPTKAQDAGV 92
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFV 122
YQC A N + T S + F K + A EG V + CNP A P +
Sbjct: 93 YQCLASNPVGTVVSREGVLRFGFLQEFSKEERDP-VKAHEGWGVMLPCNPPAHYPGLSYR 151
Query: 123 W--KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--- 176
W + N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 152 WLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFA 209
Query: 177 ----------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L PS + P + + + L C A + RI
Sbjct: 210 QLNLAAEDPRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWR 258
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 259 KVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSRGRDTVQGRIIVQAQP 311
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 185/496 (37%), Gaps = 54/496 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+++ C+ P T W + E+L NS L + D L IR ++ D Y
Sbjct: 419 EISIACQPRAAPKATVLWSKGTEILVNSSRLTV-------TPDGTLVIRNIS-RSDEGRY 470
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A+N + S+ VL+++ + K S G N+T+ C+ P F
Sbjct: 471 TCFAENFMGKANSTG---VLSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFT 527
Query: 123 WKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D I G RR + G+L I G Y C A V +D +
Sbjct: 528 WTLDDFPIDFDKPGGHYRRASVKETVGDLTILSAQLRHGGTYECMAQTV--VDSASKEAT 585
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
VL + +QL S + +A R ++ T
Sbjct: 586 VLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTRPAG-KWKQVRTNP 644
Query: 236 INIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLPGG 284
NI+G +YE V ++ +I TK V P P G
Sbjct: 645 ANIEGNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAV----PSVAPSG 700
Query: 285 VQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ + WT + NG Y + R +S+W + V G + +
Sbjct: 701 LGGGGGAPGELIVNWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGADTQYFVY 757
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E+ + P++ +E K+ + N G G P S + + ++P AP+++ G
Sbjct: 758 SNES-----IRPYTPFEVKIRSYNRRGDG-PESLTATVYSAEEEPRVAPTKVWAKGISSS 811
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+++++WEP+ ++ N + Y+I + K D E ++ ++ G +A V T+Y
Sbjct: 812 EMNVTWEPV-QQDMNGVLLGYEIRYWKAGDKEAAADRVRTAGLETLACVT--GLHPNTKY 868
Query: 462 EVKVQAINDVGPGPES 477
V V+A N G GP S
Sbjct: 869 HVTVRAYNRAGTGPAS 884
>gi|432092481|gb|ELK25096.1| Contactin-4 [Myotis davidii]
Length = 1118
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 189/371 (50%), Gaps = 15/371 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
++W C A G P TY W +NGE PL QDR I+ L I ++ D MYQC
Sbjct: 304 VSWECRASGRPRPTYRWLKNGE-------PLFAQDRVHIEQGSLNITGVS-LADAGMYQC 355
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ +SSA+L V+ P F + L+ T GG+V I C P+A+PKP + WKK
Sbjct: 356 VAENRHGAVFSSAELSVIAAGPDFSRALLKRVTLVKVGGDVVIECKPKASPKPIYTWKKG 415
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R I E+G+L I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 416 RAVLRESERITISEDGSLRIVNVTKADAGSYTCVATNHFGTASSTGSLVV-KDPTRVTVP 474
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + + ++ L C + LD+ + W+ NG RI N D + E G L I
Sbjct: 475 PASMDVTVGESIVLTCQVRQDHSLDIVFTWSFNGHRIDFNRDGDHFERVGGQDSAGDLMI 534
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N AG+Y C V+++V ++S +IV GPPG P V + E+ T+A + W+ G N
Sbjct: 535 RNIQLKHAGKYVCTVQTSVDQLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWSPGPDN 594
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+T Y + ART ++ W VS D GR + L PW YEF+ +A N
Sbjct: 595 HSPVTLYVVQARTPFSVGWQAVS-----TVPDVIDGRTFTATVVGLNPWVEYEFRTVAAN 649
Query: 366 ELGYGEPSSPS 376
+G GEPS PS
Sbjct: 650 AIGIGEPSPPS 660
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+GG + C P P VW++ DG I RR +G L I ++D+G+Y C
Sbjct: 209 AKGGTARLECFALGNPVPTIVWRRADGKPIARKARRH-QSDGILEIPNFQQEDAGLYECV 267
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A ++ C A Y W NG
Sbjct: 268 AENSRGKNVARGQLTFYAQPNWIQKI-SDIQVAIEDSVSWECRASGRP--RPTYRWLKNG 324
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D ++I+ G L IT S ADAG Y+CV ++ G + S + +VI GP
Sbjct: 325 EPLFAQD-------RVHIEQGSLNITGVSLADAGMYQCVAENRHGAVFSSAELSVIAAGP 377
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Query: 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 443
D P P+ + GGGG +L I+WE +P E QN Y + +R + T T+
Sbjct: 752 DVPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR-PHGTVIWMLTVLASA 810
Query: 444 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPLVIISYVCQGDLKLCLP 503
+ V R S ++ +EV+V N+ G GP S + ++ + S+ G L C P
Sbjct: 811 DACRYVFRNESVRPFSPFEVRVGVYNNKGEGPFSPITVVYSAEEGLCSH---GFLAPCPP 867
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 22/177 (12%)
Query: 103 EGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCT 160
+G + + C P A + + + W + RR + E GNL I+ V + D G Y+C
Sbjct: 107 QGQGMVLLCGPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCV 166
Query: 161 ATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 210
TN + G L + P Q P + A +L C A +
Sbjct: 167 VTNTVTNHKVLGPPTPLTLRNDGVMGEYEPKIEVQFPDTVPTAKGGTARLECFALGNPVP 226
Query: 211 DVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ +W +G I + G+LEI N DAG YECV +++ GK
Sbjct: 227 TI--VWRRADGKPIARKARR-------HQSDGILEIPNFQQEDAGLYECVAENSRGK 274
>gi|405957294|gb|EKC23517.1| Contactin [Crassostrea gigas]
Length = 1188
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 258/515 (50%), Gaps = 68/515 (13%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D ++ +T C+A G P T+SW++N + L +P+ + I NVLTI
Sbjct: 461 VDEESHVTLRCDALGKPRPTFSWYKNSQPL----VPVPGEIE--IVSNVLTI-------- 506
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
L+T+ LR P+F K PL + A E GN+TI C PEAAP P+
Sbjct: 507 -----------LRTQVGKHALR-----PTFIKYPLPTTLLAAESGNLTIPCQPEAAPAPE 550
Query: 121 FVWKKDGNII------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W K+G + G+ ++ NG L I VS D G Y+C A N+HG ++ +
Sbjct: 551 ITWVKNGAQMSLSFTNGNQNGVQMLLNGYLKIVGVSLGDGGFYTCHAKNIHGDAQTTTNV 610
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNELET 233
IV G Y +P + + + + ++C A + LD+ Y+W NG I D
Sbjct: 611 IVSKG-VYMAPIPREYNVDRNGTVFIQCQASYDASNLDLVYVWKFNGELI---DFGRDTL 666
Query: 234 PNINIDGGL--LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 291
GGL L I A + AG YEC+ ++T+ + S T VIV GPPG+PG V V+
Sbjct: 667 LRKGASGGLNGLFINYADYFHAGLYECIAQTTITQTSVATNVIVRGPPGMPGFVYRVKGS 726
Query: 292 KT--SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS--- 346
+T S T++WT +G + Y I A+T N+TW +S+ + + G EA
Sbjct: 727 ETPHSVTLKWTRAPDHGSQVQFYYIEAQTILNTTWRLMSK--VSEMQTLLPGPNEADKRQ 784
Query: 347 -IENVLVPWSTYEFKVIAGNE-LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
I + L+P++ Y F+V A N L GE S P+ + + P KP AP+ +GGGGG +G L+
Sbjct: 785 FIVSGLIPYNNYRFRVYASNAYLDPGEISRPTEEIHIPGAKPIMAPTNVGGGGGSVGVLT 844
Query: 405 ISWEPLPREKQNAPNIYYKIFWRK----KNDTEFQSETLKEY-----------GNVGIAV 449
I+W L +E Q+ PN+ Y ++WR+ + + EFQS+TL E G G
Sbjct: 845 ITWRMLSKELQSGPNVKYYVYWRRSRNGETNLEFQSKTLLESNKLLIQTNRTDGTYGTYT 904
Query: 450 VRIPS-EFYYTEYEVKVQAINDVGPGPESEVVTIW 483
V +PS + YY ++V V N G GP S + TI+
Sbjct: 905 VPLPSDDLYYLPFDVMVGVGNAFGRGPNSSIETIY 939
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 106/280 (37%), Gaps = 44/280 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTI--RYLNPERDPAMYQCRA 68
C A G P Y W R ++ E L + Y I + LT LN RD Y C A
Sbjct: 168 CIATGNPQPKYQWQRKRPTMDVEIL--TSNNAYTISNGKLTFDSTRLNETRDAGEYYCVA 225
Query: 69 KNQL---KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWK 124
N+ ++ S L P P+ Y G + CNP + P K+ W
Sbjct: 226 SNKFGSVRSEPSRVSFGRLAQFPVVAPGPVNVALYQG----TYLQCNPPSYKPNLKYQWM 281
Query: 125 KDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSC-----------TATNVHGMDESK 171
K+ + + + F + GNL S V D+ IY C AT+ + S
Sbjct: 282 KENSFLLPVLNKHFFVSIGGNLYFSEVQSSDAAIYHCIVTLAALPGDTMATDQPPTETSM 341
Query: 172 GRLIVLHGPS---YYEQLPPKITIAAHR------NLQLRCSAHTEELLDVAYIWTHNGVR 222
G + + G S Y Q+ R ++ + C A+ LD Y W +R
Sbjct: 342 GMPLRVAGESASNYPAQIHTDFPAVFPRTPLLGMDVVIECLAYGRSPLD--YSW----IR 395
Query: 223 IGNMDL-NELETPNINIDGGLLEITNASFADAGEYECVVK 261
GN D+ + T + N +L I N F D G Y C VK
Sbjct: 396 EGNKDIPKKAYTEDYN---RVLVIPNIQFGDEGTYTCNVK 432
>gi|119584280|gb|EAW63876.1| contactin 4, isoform CRA_d [Homo sapiens]
Length = 699
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 196/379 (51%), Gaps = 15/379 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNT 381
A N +G GEPS PS + T
Sbjct: 676 AANVIGIGEPSRPSEKRRT 694
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVDTGM-----DFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIA-------RKARR 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP YK
Sbjct: 333 VFW-ECKANGRPKPTYK 348
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + +G R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
>gi|190339368|gb|AAI62590.1| Contactin 2 [Danio rerio]
Length = 1040
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 235/484 (48%), Gaps = 26/484 (5%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++L W+C A G P T W RNG L + QDR + + L I L E D MY
Sbjct: 343 SELQWSCAAAGKPRPTIRWLRNGHALIT-------QDRVEVNNGRLKIANLALE-DSGMY 394
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A+N+ T YS+A+LRV P F+ P+ A GG V + C P AAPKP W
Sbjct: 395 QCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWS 454
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ ++ + R + +G L I +SR D G Y+C A N G S G L V +
Sbjct: 455 RGTELLTNSTRITVTPDGILWIYNISRADEGKYTCFAENYLGKANSTGHLSVRDA-TKIT 513
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---- 240
P I N L+C A + +D+ + W+ NGV +DL E ++G
Sbjct: 514 LAPSNADINQGENATLQCHASHDPTMDLTFTWSLNGV---PLDLEEPNGHYRRMEGKETI 570
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N + AG Y C ++ V ++V GPPG PGG+ V V+ TS ++W+
Sbjct: 571 GDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVVRGPPGPPGGLVVTSVNDTSVELRWS 630
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y I+ R++ W + E G E++ L PW YEF+
Sbjct: 631 RGYDNHSPIGKYVILGRSSQTHDWKRMRTDPANIE-----GNAESARVIDLRPWMDYEFQ 685
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PSP+ T P APS +GGGGG +L I+W P+ RE QN +
Sbjct: 686 VIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTPMAREYQNGDSF 745
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIA--VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y + +RK+ + T+ + NV + V S Y +EV+++A N G GP S+
Sbjct: 746 GYILAFRKQG---IPTWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNKKGEGPFSQ 802
Query: 479 VVTI 482
+ +
Sbjct: 803 IAVV 806
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 184/499 (36%), Gaps = 59/499 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P T W R ELL + T R + + + Y D Y C A+N
Sbjct: 441 CKPRAAPKPTLFWSRGTELLTNST-------RITVTPDGILWIYNISRADEGKYTCFAEN 493
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 123
L S+ L V +TL PS +G N T+ C+ P F W
Sbjct: 494 YLGKANSTGHLSVRDATKITLAPS--------NADINQGENATLQCHASHDPTMDLTFTW 545
Query: 124 KKDG---NIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+G ++ G + E G+L+I +G Y+CTA V + +L+V
Sbjct: 546 SLNGVPLDLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVV 605
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P L +T +++LR S + + + G D + T
Sbjct: 606 RGPPGPPGGL--VVTSVNDTSVELRWSRGYDNHSPIGK-YVILGRSSQTHDWKRMRTDPA 662
Query: 237 NIDGGLLEITNASFADAG-----EYECVVKSTVGK-----ISTKTTVIVEGPPGLPGGVQ 286
NI+G +A D E++ + + +G S + P P G+
Sbjct: 663 NIEG---NAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLG 719
Query: 287 VVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
++ I WT A NG Y + R TW V V E RY
Sbjct: 720 GGGGNRNELIITWTPMAREYQNGDSFG-YILAFRKQGIPTWTVVK--VPNVESSRYVYSN 776
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
++ L + +E ++ A N+ G G P S ++ ++P +P RI ++
Sbjct: 777 DS-----LTAYCPFEVRIKAYNKKGEG-PFSQIAVVHSAEEEPTVSPRRINATALTAFEI 830
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
+SWEP+ N Y+I + ++++ E ++ ++ G A R+ T Y +
Sbjct: 831 QVSWEPIQHLNINGVLRGYEIRYWRQHEREAAADRVRTAGLENTA--RVTGLRPNTLYHI 888
Query: 464 KVQAINDVGPGPESEVVTI 482
V A N G GP S T+
Sbjct: 889 TVLAYNSAGTGPASPRTTV 907
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 131/329 (39%), Gaps = 48/329 (14%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T +C+A P Y W NG + ++ Y L I RD
Sbjct: 51 EGKVTLSCQARSSPAAVYRWRVNGT-----DISFAEESHYTQVAGNLVINNPQNGRDGGS 105
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSF-KKRPLESET--YAGEGGNVTIFCNPEAA-PKP 119
YQC A N+ T S RV LK + P ES + EG + C P A P
Sbjct: 106 YQCLAINRCGTIVS----RVANLKFGYLHDFPPESRSPQTVHEGMGTFLACQPPAHYPAL 161
Query: 120 KFVW--KKDGNIIG-SGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDES----- 170
+ W + N I GR + + GNL ++ +D+G Y C T MD S
Sbjct: 162 SYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGNYFCFTT--INMDVSTKSIF 219
Query: 171 -KGRLIVLH--------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
K + +H P+ + P + + + QL C A+ + + +
Sbjct: 220 SKAVQLTVHPDASPRKTAPNIRVRFPAETYALSGQTAQLECFAYGNPIPKIRW------- 272
Query: 222 RIGNMDLNELETPNI--NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ + P + ++DG +L I +F D G YEC V ++ G+ + + V V+ P
Sbjct: 273 ----RKVDGILPPKVGASVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRVSVQAQP 328
Query: 280 GLPGGVQVVEVHKTSATIQWTDGATNGRP 308
+ EV + S+ +QW+ A G+P
Sbjct: 329 DWLQVMSDSEV-EISSELQWSCAAA-GKP 355
>gi|432092485|gb|ELK25100.1| Contactin-3 [Myotis davidii]
Length = 1033
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 221/480 (46%), Gaps = 47/480 (9%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ L W C A G P +Y W RNGE L E +R +++ L+I L+ D M
Sbjct: 405 EESLRWDCRAGGKPKPSYRWLRNGEALALE-------ERIQLENGALSIVNLS-VADAGM 456
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+QC A+N+ YSSA+LRVL P F P+ A G V + C P AAP+ W
Sbjct: 457 FQCVAENKHGLAYSSAELRVLASAPDFSATPMRKLVRAQVGSVVGLDCRPRAAPRAVCSW 516
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K+ + GR + G L I+ V++ D+G Y+C A N G RL+V P+
Sbjct: 517 KRGEVTVREDGRISFLKEGGLSIANVTKADAGTYTCFAENQFGTANDSTRLVVTD-PTRI 575
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + ++ ++ L C + LLDVA+ W NG D + LE + G L
Sbjct: 576 TLAPSNMDVSVGESVVLPCQVRHDPLLDVAFTWYFNGALADFQKDGSHLEKVGGSSSGDL 635
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N G+Y CVV+S V +S+ ++V G PG PG VQV E+ T+A + WT+G
Sbjct: 636 M-IRNIQLKHGGKYVCVVQSAVDSVSSAADLVVRGSPGPPGNVQVEEITDTTAQVSWTEG 694
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y + ART ++ W + + + +D G + L PW YEF+V+
Sbjct: 695 TDNHSPITSYSVQARTPFSVGW--QAARTVPEVID---GNTHTATVVELNPWVEYEFRVV 749
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N LG GEPS PS + P+P E QN Y
Sbjct: 750 ASNRLGGGEPSLPSEK------------------------------PVPEELQNGEGFGY 779
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + +T+ + V R S + Y+VKV N+ G GP S V T+
Sbjct: 780 VVAFRPLGVTTW-IQTVVTSPDAPRYVFRNESIVPFAPYQVKVGVYNNKGEGPFSPVATV 838
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 115/275 (41%), Gaps = 30/275 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T+ CEA G P Y W NG +N L + RY + L + + +RD YQC
Sbjct: 119 VTFKCEARGNPSPQYRWQLNGSDIN-----LAVESRYELNGGDLVVINPHRDRDSGSYQC 173
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFV 122
A N L T S A+L+ L+ +FK R + S EG V + C P ++
Sbjct: 174 FATNPLGTIVSREAKLQFAYLE-NFKTR-MRSAVSVREGQGVVLLCGPPPHSGELSYAWI 231
Query: 123 WKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL---- 177
+ + + + GRR I E G+L ++ V D G Y+C T+V G L
Sbjct: 232 FNEYPSFVEEDGRRFISQETGHLYVAKVEPSDVGNYTCVVTSVVTAARVLGSPTPLMLRA 291
Query: 178 ------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ P Q P + A ++L C A + + W + R +N
Sbjct: 292 DGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPRIT--WRRSDGRPFPRKIN-- 347
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ GG+LEI DAG YEC+ +++ G+
Sbjct: 348 ----VRKFGGVLEIPGFEQEDAGSYECLAENSRGR 378
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN 141
+L P F P +S G E VT C P P++ W+ +G+ I + N
Sbjct: 94 LLLHGPVFVSEPSDSMVPVGAEDKRVTFKCEARGNPSPQYRWQLNGSDINLAVESRYELN 153
Query: 142 GN--LLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
G ++I+P DSG Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 154 GGDLVVINPHRDRDSGSYQCFATNPLGTIVSREAKLQFAYLENFKTRMRSAVSVREGQGV 213
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E I+ + G L + +D G Y
Sbjct: 214 VLLCGPPPHSGEL---SYAWIFNEY---PSFVEEDGRRFISQETGHLYVAKVEPSDVGNY 267
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 268 TCVVTSVV 275
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 172/497 (34%), Gaps = 91/497 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C P SW R E ED F+++ L+I + + D Y C A+N
Sbjct: 504 CRPRAAPRAVCSWKRG------EVTVREDGRISFLKEGGLSIANVT-KADAGTYTCFAEN 556
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVW----- 123
Q T S +L V+T P + GE +V + C P F W
Sbjct: 557 QFGTANDSTRL-VVTDPTRITLAPSNMDVSVGE--SVVLPCQVRHDPLLDVAFTWYFNGA 613
Query: 124 ----KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
+KDG+ + G +G+L+I + G Y C + S L+V
Sbjct: 614 LADFQKDGSHLEKVGGSS---SGDLMIRNIQLKHGGKYVCVVQSAVDSVSSAADLVVRGS 670
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA--YIWTH---NGVRIGNMDLNELETP 234
P PP N+Q+ EE+ D WT N I + +
Sbjct: 671 PG-----PPG-------NVQV------EEITDTTAQVSWTEGTDNHSPITSYSVQARTPF 712
Query: 235 NIN----------IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 284
++ IDG T EYE V + + G P LP
Sbjct: 713 SVGWQAARTVPEVIDGNTHTATVVELNPWVEYEFRV--------VASNRLGGGEPSLPSE 764
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
V E + + + ++ + T W T V + RY R E
Sbjct: 765 KPVPEELQNGEGFGY---------VVAFRPLGVTTWIQTV------VTSPDAPRYVFRNE 809
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ +VP++ Y+ KV N G G P SP + ++P AP+ + ++
Sbjct: 810 S-----IVPFAPYQVKVGVYNNKGEG-PFSPVATVLSAEEEPTAAPAHVWAHSLSSSEIE 863
Query: 405 ISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
+SW +P + + + Y++ +W + E +K G V R+ + Y
Sbjct: 864 VSWSAIPWKLSSGHLLGYEVRYW--TSGEEGSPRRVKVV--AGETVARLHGLKSHLVYHA 919
Query: 464 KVQAINDVGPGPESEVV 480
V+A N G GP S V
Sbjct: 920 AVRAYNSAGAGPFSATV 936
>gi|18858449|ref|NP_571521.1| contactin-2 precursor [Danio rerio]
gi|4867989|gb|AAD31083.1|AF064799_1 transiently expressed axonal glycoprotein [Danio rerio]
Length = 1040
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 235/484 (48%), Gaps = 26/484 (5%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++L W+C A G P T W RNG L + QDR + + L I L E D MY
Sbjct: 343 SELQWSCAAAGKPRPTIRWLRNGHALIT-------QDRVEVNNGRLKIANLALE-DSGMY 394
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A+N+ T YS+A+LRV P F+ P+ A GG V + C P AAPKP W
Sbjct: 395 QCVAENKHSTIYSNAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWS 454
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ ++ + R + +G L I +SR D G Y+C A N G S G L V +
Sbjct: 455 RGTELLTNSTRITVTPDGILWIYNISRADEGKYTCFAENYLGKANSTGHLSVRDA-TKIT 513
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---- 240
P I N L+C A + +D+ + W+ NGV +DL E ++G
Sbjct: 514 LAPSNADINQGENATLQCHASHDPTMDLTFTWSLNGV---PLDLEEPNGHYRRMEGKETI 570
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N + AG Y C ++ V ++V GPPG PGG+ V V+ TS ++W+
Sbjct: 571 GDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVVRGPPGPPGGLVVTSVNDTSVELRWS 630
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y I+ R++ W + E G E++ L PW YEF+
Sbjct: 631 RGYDNHSPIGKYVILGRSSQTHDWKRMRTDPANIE-----GNAESARVIDLRPWMDYEFQ 685
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PSP+ T P APS +GGGGG +L I+W P+ RE QN +
Sbjct: 686 VIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTPMAREYQNGDSF 745
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIA--VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y + +RK+ + T+ + NV + V S Y +EV+++A N G GP S+
Sbjct: 746 GYILAFRKQG---IPTWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNKKGEGPFSQ 802
Query: 479 VVTI 482
+ +
Sbjct: 803 IAVV 806
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 180/496 (36%), Gaps = 53/496 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P T W R ELL + T R + + + Y D Y C A+N
Sbjct: 441 CKPRAAPKPTLFWSRGTELLTNST-------RITVTPDGILWIYNISRADEGKYTCFAEN 493
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 123
L S+ L V +TL PS +G N T+ C+ P F W
Sbjct: 494 YLGKANSTGHLSVRDATKITLAPS--------NADINQGENATLQCHASHDPTMDLTFTW 545
Query: 124 KKDG---NIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+G ++ G + E G+L+I +G Y+CTA V + +L+V
Sbjct: 546 SLNGVPLDLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKLVV 605
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P L +T +++LR S + + + G D + T
Sbjct: 606 RGPPGPPGGL--VVTSVNDTSVELRWSRGYDNHSPIGK-YVILGRSSQTHDWKRMRTDPA 662
Query: 237 NIDGGLLEITNASFADAGEYEC-VVKSTV------GKISTKTTVIVEGPPGLPGGVQVVE 289
NI+G +YE V+ S + S + P P G+
Sbjct: 663 NIEGNAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGG 722
Query: 290 VHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ I WT A NG Y + R TW V V E RY ++
Sbjct: 723 GNRNELIITWTPMAREYQNGDSFG-YILAFRKQGIPTWTVVK--VPNVESSRYVYSNDS- 778
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
L + +E ++ A N+ G G P S ++ ++P +P I ++ +S
Sbjct: 779 ----LTAYCPFEVRIKAYNKKGEG-PFSQIAVVHSAEEEPTVSPRWINATALTAFEIQVS 833
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
WEP+ N Y+I + ++++ E ++ ++ G A R+ T Y + V
Sbjct: 834 WEPIQHLNINGVLRGYEIRYWRQHEREAAADRVRTAGLENTA--RVTGLRPNTLYHITVL 891
Query: 467 AINDVGPGPESEVVTI 482
A N G GP S T+
Sbjct: 892 AYNSAGTGPASPRTTV 907
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 132/327 (40%), Gaps = 44/327 (13%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T C+A P Y W NG + ++ Y L I RD
Sbjct: 51 EGKVTLGCQARSSPAAVYRWRVNGT-----DISFAEESHYTQVAGNLVINNPQNGRDGGS 105
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSF-KKRPLESET--YAGEGGNVTIFCNPEAA-PKP 119
YQC A N+ T S RV LK + + P ES + EG + C P A P
Sbjct: 106 YQCLAINRCGTIVS----RVANLKFGYLRDFPPESRSPQTVHEGMGTFLACQPPAHYPAL 161
Query: 120 KFVW--KKDGNIIG-SGGRRKIFE-NGNLLISPVSRDDSGIYSC-TATNVHGMDES---K 171
+ W + N I GR + + GNL ++ +D+G Y C T N+ +S K
Sbjct: 162 SYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGNYFCFTTINMDVSTKSIFSK 221
Query: 172 GRLIVLH--------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ +H P+ + P + + + QL C A+ + + +
Sbjct: 222 AVQLTVHPDASPRKTAPNIRVRFPAETYALSGQTAQLECFAYRNPIPKIRW--------- 272
Query: 224 GNMDLNELETPNI--NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
++ + P + ++DG +L I +F D G YEC V ++ G+ + + V V+ P
Sbjct: 273 --RKVDGILPPKVGTSVDGPILIIPELNFDDEGMYECEVYNSEGRETHQGRVSVQAQPDW 330
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRP 308
+ EV + S+ +QW+ A G+P
Sbjct: 331 LQVMSDSEV-EISSELQWSCAAA-GKP 355
>gi|193788222|dbj|BAG53116.1| unnamed protein product [Homo sapiens]
Length = 699
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 196/379 (51%), Gaps = 15/379 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSGMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNT 381
A N +G GEPS PS + T
Sbjct: 676 AANVIGIGEPSRPSEKRRT 694
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVDTGM-----DFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIA-------RKARR 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP YK
Sbjct: 333 VFW-ECKANGRPKPTYK 348
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + +G R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
>gi|403270507|ref|XP_003927218.1| PREDICTED: contactin-4 [Saimiri boliviensis boliviensis]
Length = 1004
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 224/483 (46%), Gaps = 42/483 (8%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDP 61
+ ++ W C+A G P TY W +NGE PL QD+ I + N L P P
Sbjct: 330 EENVFWECKANGRPKPTYRWLKNGE-------PLLTQDKLQIWGKLNFQGTLALLPSPKP 382
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+ P F + L+ T GG V I C P+A+PKP +
Sbjct: 383 ------------------------VGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPAY 418
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 419 TWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPT 477
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + + ++ L C + LD+ + W+ NG I + D + E + G
Sbjct: 478 RVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAG 537
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L+ I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+ + W
Sbjct: 538 DLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTVQLSWI 596
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+
Sbjct: 597 PGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFR 651
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN
Sbjct: 652 TVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF 711
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R + L + V R S ++ +EVKV N+ G GP S
Sbjct: 712 GYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTT 770
Query: 481 TIW 483
++
Sbjct: 771 VVY 773
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG ++ + RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP Y+
Sbjct: 333 VFW-ECKANGRPKPTYR 348
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
+ +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 175/493 (35%), Gaps = 49/493 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 408 CKPKASPKPAYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 459
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 460 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 518
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 519 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPG-- 576
Query: 184 EQLPPKITIAAHRNLQLRCS----AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
P +TI + ++ S + + I +G ++ + P + ID
Sbjct: 577 --PPEAVTIDEITDTTVQLSWIPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-ID 631
Query: 240 GGLLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHK 292
G T EYE V + +G + S K P P V K
Sbjct: 632 GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSK 691
Query: 293 TSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
+ I W + NGR Y + R W + + RY R E+
Sbjct: 692 SELVITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES---- 744
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P+S +E KV N G G P SP+ + ++P + P+ I D+ + W
Sbjct: 745 -VRPFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS 802
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
P EK Y++ + + D E + ++ GN +I + Y + V+A N
Sbjct: 803 -PLEKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYN 859
Query: 470 DVGPGPESEVVTI 482
G GP S V +
Sbjct: 860 SAGTGPSSATVNV 872
>gi|47211486|emb|CAF95091.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1012
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 235/494 (47%), Gaps = 46/494 (9%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++L W+C A G P + W RNG+ P+ QDR + L I L E D MY
Sbjct: 311 SELIWSCIAAGKPRPSIRWLRNGQ-------PIGTQDRVEVNGAKLKISNLALE-DSGMY 362
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A+N+ T YSSA+LRV P F+ P+ A GG V I C P AAPKP W
Sbjct: 363 QCVAENKHGTIYSSAELRVQVQAPDFRLNPVRKLIPAARGGQVKIECRPRAAPKPSLFWS 422
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ ++ + R + +G L + +SR D G Y+C A N G S G L V +
Sbjct: 423 RGTELLTNSSRVTVAPDGVLWLYNISRADEGKYTCFAENYLGKANSTGHLSVRDA-TKIT 481
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---- 240
P I N+ L+C A + +D+ + WT NGV +DL + P ++G
Sbjct: 482 LAPSNADINQGENVSLQCHASHDPTMDLTFTWTLNGVL---LDLEDPAGPYRRVEGKENI 538
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA + AG Y C ++ V S ++V GPPG PGG+ V V +TS ++W+
Sbjct: 539 GDLMIKNAQLSQAGMYTCTAQTVVDSASAAAKLVVRGPPGPPGGLLVKNVAETSVELRWS 598
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y I+ R + W + E G E++ L+PW YEFK
Sbjct: 599 RGYDNHSPIGKYVIMGRRAPSLQWRQMRTEPANIE-----GNAESARVIGLIPWMDYEFK 653
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS S T P APS +GGGGG +L I+W P+ RE QN
Sbjct: 654 VIASNILGSGEPSMASHTVRTQQAAPTVAPSGLGGGGGDHHELIITWTPMAREYQNGDGF 713
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP---SEFY---------YTEYEVKVQAI 468
Y + +++K+ + ++RIP S Y Y+ ++V ++A
Sbjct: 714 GYILAFKRKHAPSW-------------TMLRIPHVDSSRYVYYNESLSPYSPFDVMIRAY 760
Query: 469 NDVGPGPESEVVTI 482
N G GP S++ +
Sbjct: 761 NRRGEGPFSQIAVV 774
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 115/278 (41%), Gaps = 34/278 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKT 74
P ++Y WF N E N L+ D R+F+ + N E+ D A Y C ++
Sbjct: 127 PALSYRWFIN-EFPNF----LKKSDGRWFVSQVTGNLYLANTEQSDTANYFCFTTINMEI 181
Query: 75 RYSSAQLRVLTL-----------KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
S R + L PS K R SETY G + C P PK W
Sbjct: 182 SSKSTFSRPIQLTVLPEASPRKSAPSIKVR-FPSETYGLAGQKAQLECFAYGNPVPKLRW 240
Query: 124 KK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+K DG + G E L++ +S DD G+Y C A N G + +GR+ V P +
Sbjct: 241 RKVDGLLPAKTGTSA--EGPTLILPDLSFDDEGVYECEAYNSEGRETYQGRISVQAQPQW 298
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
Q+ + L C A + + W NG IG D + ++G
Sbjct: 299 L-QVMSDSEVEISSELIWSCIAAGKPRPSIR--WLRNGQPIGTQD-------RVEVNGAK 348
Query: 243 LEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
L+I+N + D+G Y+CV ++ G I S + V V+ P
Sbjct: 349 LKISNLALEDSGMYQCVAENKHGTIYSSAELRVQVQAP 386
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 186/496 (37%), Gaps = 53/496 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C P + W R ELL + R + + + Y D Y C A+N
Sbjct: 409 CRPRAAPKPSLFWSRGTELLT-------NSSRVTVAPDGVLWLYNISRADEGKYTCFAEN 461
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 123
L S+ L V +TL PS +G NV++ C+ P F W
Sbjct: 462 YLGKANSTGHLSVRDATKITLAPS--------NADINQGENVSLQCHASHDPTMDLTFTW 513
Query: 124 KKDGNIIG----SGGRRKI--FEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+G ++ +G R++ EN G+L+I +G+Y+CTA V + +L+V
Sbjct: 514 TLNGVLLDLEDPAGPYRRVEGKENIGDLMIKNAQLSQAGMYTCTAQTVVDSASAAAKLVV 573
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P L + A +++LR S + + + G R ++ ++ T
Sbjct: 574 RGPPGPPGGL--LVKNVAETSVELRWSRGYDNHSPIGK-YVIMGRRAPSLQWRQMRTEPA 630
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVGK----ISTKTTVIVEGPPGL-PGGVQVVE 289
NI+G +YE + + +G +++ T + P + P G+
Sbjct: 631 NIEGNAESARVIGLIPWMDYEFKVIASNILGSGEPSMASHTVRTQQAAPTVAPSGLGGGG 690
Query: 290 VHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
I WT A NG + R + S HV + RY E+
Sbjct: 691 GDHHELIITWTPMAREYQNGDGFGYILAFKRKHAPSWTMLRIPHV---DSSRYVYYNES- 746
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
L P+S ++ + A N G G P S ++ ++P P I D+ +S
Sbjct: 747 ----LSPYSPFDVMIRAYNRRGEG-PFSQIAVVHSAEEEPTVGPLSINATALNAFDIQVS 801
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
W+P+ + + Y+I + + + E ++ ++ G A R+ T Y V V
Sbjct: 802 WDPVQQLSADGLLRGYEIRYWRPQEREAAADRVRTVGRETTA--RVSGLRPSTRYHVSVL 859
Query: 467 AINDVGPGPESEVVTI 482
A N G GP S T+
Sbjct: 860 AYNSAGTGPSSPRTTV 875
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 121/331 (36%), Gaps = 50/331 (15%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T +C+A P +Y W L+N +PL Y + L I RD
Sbjct: 19 EGKVTLSCQARASPAASYRW-----LVNGTEVPLGLDLHYTLVAGSLVISSPESHRDAGS 73
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSF-KKRPLESET--YAGEGGNVTIFCNPEAA---- 116
YQC A N+ T S R TLK + P +S + A EG + C P
Sbjct: 74 YQCLAINRCGTVIS----RAATLKFGYLNDFPTDSRSPQTAYEGAGTFLACRPPPHYPAL 129
Query: 117 -------PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC-TATNVHGMD 168
P F+ K DG S GNL ++ + D+ Y C T N+
Sbjct: 130 SYRWFINEFPNFLKKSDGRWFVSQ------VTGNLYLANTEQSDTANYFCFTTINMEISS 183
Query: 169 ESKG----RLIVL-------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 217
+S +L VL PS + P + A + QL C A+ +
Sbjct: 184 KSTFSRPIQLTVLPEASPRKSAPSIKVRFPSETYGLAGQKAQLECFAYGNPVPK------ 237
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+R +D + +G L + + SF D G YEC ++ G+ + + + V+
Sbjct: 238 ---LRWRKVDGLLPAKTGTSAEGPTLILPDLSFDDEGVYECEAYNSEGRETYQGRISVQA 294
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
P + EV +S I A RP
Sbjct: 295 QPQWLQVMSDSEVEISSELIWSCIAAGKPRP 325
>gi|441633559|ref|XP_003252559.2| PREDICTED: contactin-1 [Nomascus leucogenys]
Length = 1017
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 243/488 (49%), Gaps = 35/488 (7%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I D N+ NI+
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVI---DFNK---ENIHYQR 558
Query: 241 GLL----EITNASFADAGEYECVVKSTVGKISTKTTVIVEG--PPGLPGGVQVVEVHKTS 294
+ EI + + + E + +G + I PPG PGG+++ ++ TS
Sbjct: 559 NFMMIAAEIHVVTLSASPEQSPDRRLNLGTHHLRFQFIPSNNGPPGPPGGLRIEDIRATS 618
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ W+ G+ N PI+ Y I +T + W + E G EA+ L+PW
Sbjct: 619 VALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPW 673
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
YEF+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE
Sbjct: 674 MEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREY 733
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G G
Sbjct: 734 HYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDG 792
Query: 475 PESEVVTI 482
P S V I
Sbjct: 793 PYSLVAVI 800
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQASPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQASPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
V + RY + E + P + ++ KV A N G G P S N+ D P +AP
Sbjct: 758 VTNPDTGRYVHKDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAP 811
Query: 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 450
+ +G ++S+ WE + + + I Y K+ T +EY
Sbjct: 812 TEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------A 865
Query: 451 RIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
R+ + T+Y ++V A N G GP S+++
Sbjct: 866 RLENLLPDTQYFIEVGACNSAGCGPPSDMI 895
>gi|157909805|ref|NP_766592.2| contactin-4 isoform 2 precursor [Mus musculus]
gi|157909814|ref|NP_001103221.1| contactin-4 isoform 2 precursor [Mus musculus]
Length = 705
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 187/374 (50%), Gaps = 15/374 (4%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 335 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 387 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +IV P+ P
Sbjct: 447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W + D G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNT 381
G GEPS PS + T
Sbjct: 681 GIGEPSRPSEKRRT 694
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 278 P 278
P
Sbjct: 406 P 406
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 34/319 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + D L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKINGTDVD-----IGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYE 184
RR + E GNL I+ V + D G Y+C TN + G ++L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMG 221
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I
Sbjct: 222 EYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKAR 272
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTS 294
+ G+LEI N DAG YECV +++ GK K + P VQ++ ++H
Sbjct: 273 RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAM 329
Query: 295 ATIQWTDGATNGRPITHYK 313
+ + NGRP Y+
Sbjct: 330 EESVFWECKANGRPKPTYR 348
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + +
Sbjct: 27 VFVQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVD 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
>gi|109732265|gb|AAI15767.1| Contactin 4 [Mus musculus]
Length = 705
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 187/374 (50%), Gaps = 15/374 (4%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 335 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 387 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +V+ P+ P
Sbjct: 447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W + D G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNT 381
G GEPS PS + T
Sbjct: 681 GIGEPSRPSEKRRT 694
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 278 P 278
P
Sbjct: 406 P 406
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 34/319 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + D L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYE 184
RR + E GNL I+ V + D G Y+C TN + G ++L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMG 221
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I
Sbjct: 222 EYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKAR 272
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTS 294
+ G+LEI N DAG YECV +++ GK K + P VQ++ ++H
Sbjct: 273 RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAM 329
Query: 295 ATIQWTDGATNGRPITHYK 313
+ + NGRP Y+
Sbjct: 330 EESVFWECKANGRPKPTYR 348
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + +
Sbjct: 27 VFVQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
>gi|148666978|gb|EDK99394.1| contactin 4 [Mus musculus]
Length = 639
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 187/374 (50%), Gaps = 15/374 (4%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 269 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 320
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 321 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 380
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +V+ P+ P
Sbjct: 381 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPS 439
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 440 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 499
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 500 IQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 559
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W + D G+ + L PW YEF+ +A N +
Sbjct: 560 PITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVI 614
Query: 368 GYGEPSSPSPQYNT 381
G GEPS PS + T
Sbjct: 615 GIGEPSRPSEKRRT 628
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 122/309 (39%), Gaps = 57/309 (18%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + D L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKR-------------------PLESETYAGE------ 103
N T S A+L+ L+ +FK R P S GE
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTRTRSTVSVRRGQGMVLLCGPPPHSGGVMGEYEPKIE 162
Query: 104 -----------GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSR 151
G V + C P P +W++ DG I RR NG L I +
Sbjct: 163 VQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQ 221
Query: 152 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 211
+D+G Y C A N G + +KG+L P++ Q+ I +A ++ C A+
Sbjct: 222 EDAGSYECVAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--K 278
Query: 212 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--ST 269
Y W NG + D I I+ G L IT + +DAG Y+CV ++ G I S
Sbjct: 279 PTYRWLKNGDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSA 331
Query: 270 KTTVIVEGP 278
+ +VI E P
Sbjct: 332 ELSVIAESP 340
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 104/265 (39%), Gaps = 43/265 (16%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + +
Sbjct: 27 VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS---------AHTEELLDVAY---IWTHNGVRIGNMDLNELETPNINI-----DG-- 240
L C E ++V + + G + ++ L P I DG
Sbjct: 142 LLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGTTV-KLECFALGNPVPTILWRRADGKP 200
Query: 241 -----------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV- 288
G+LEI N DAG YECV +++ GK K + P VQ++
Sbjct: 201 IARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIIN 257
Query: 289 EVHKTSATIQWTDGATNGRPITHYK 313
++H + + NGRP Y+
Sbjct: 258 DIHVAMEESVFWECKANGRPKPTYR 282
>gi|194210217|ref|XP_001915523.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Equus caballus]
Length = 1041
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 233/477 (48%), Gaps = 16/477 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W+C A G P T W RNGE PL Q R + L L+ E D
Sbjct: 339 DIGSNLRWSCAAAGKPRPTVRWLRNGE-------PLVSQSRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG V I C P AAPK
Sbjct: 391 GMYQCVAENKHGTVYASAELAVQALAPDFRLNPIRRLIPAARGGEVVILCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L++ +SR D G Y+C A N G S G L V +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLILRNISRSDEGKYTCFAENFMGKANSTGVLSVRDA-T 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + NL L+C A + +D+ ++WT + I + + ++
Sbjct: 510 KITLAPSSADVNLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDFDKPGSHYRRASVKETV 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V +S + TV+V GPPG PGGV V V T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSVSKEATVLVRGPPGPPGGVVVRNVGDTTVQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW+ YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANVE-----GNAETAQVLGLTPWTDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L ++W P+PRE QN
Sbjct: 685 VLASNILGTGEPSGPSSKIRTQEAAPSVAPSGLSGGGGAPGELVVNWTPVPREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y + +R++ +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSAGWQTARVPG-ADAQYFVYSNDSVRPYTPFEVKIRSYNRRGAGPES 800
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGDLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWSCAAAGKPRPTVR--WLRNGEPL-------VSQSRVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G + + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTVYASAELAVQA 414
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 118/291 (40%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG + LE R+ + L I + +D +YQC
Sbjct: 57 VTLACRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPSKAQDAGVYQC 111
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 112 LASNPVGTIVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 169
Query: 124 -KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + G+L I+ + D G YSC AT+ MD S +
Sbjct: 170 LNEFPNFIPTDGRHFVSQTTGDLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 227
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + P + + + L C A + RI +
Sbjct: 228 NLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 276
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 277 DGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 83/214 (38%), Gaps = 39/214 (18%)
Query: 77 SSAQLRVLTLKPSFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 131
SSA T P F+ +PL E T VT+ C A+P + WK +G +
Sbjct: 26 SSAWGAPATFGPVFEDQPLGLLFPEESTEE----KVTLACRARASPPATYRWKMNGTEMK 81
Query: 132 -SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQL 186
G R GNL+I +P D+G+Y C A+N G E+ R L S E+
Sbjct: 82 LEPGSRHQLVGGNLVIMNPSKAQDAGVYQCLASNPVGTIVSREAVLRFGFLQEFSKEERD 141
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG----- 240
P K L AH L +Y W N E PN I DG
Sbjct: 142 PVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVS 186
Query: 241 ---GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 187 QTTGDLYIARTNASDLGNYSCLATSHM-DFSTKS 219
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + ++ ++P P+++ G +++++W+P+ +
Sbjct: 780 PYTPFEVKIRSYNRRGAG-PESLTALVHSAEEEPRVTPTKVWAKGVSSSEMNVTWDPVQQ 838
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ Y I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 839 DVNGILLGYEXIRYWKAGDKEAAADRVRTAGLDTSA--RVTGLHPNTKYHVTVRAYNRAG 896
Query: 473 PGPES 477
GP S
Sbjct: 897 TGPAS 901
>gi|326933669|ref|XP_003212923.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Meleagris
gallopavo]
Length = 1036
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 237/484 (48%), Gaps = 18/484 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W+C A G P W R+G+ PL Q+R + L L E D
Sbjct: 334 DIGSDLRWSCVASGKPRPAVRWLRDGQ-------PLASQNRIEVSGGELRFSKLVLE-DS 385
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P++ A G V I C P AAPK
Sbjct: 386 GMYQCVAENKHGTVYASAELTVQALAPDFRLNPVKRLIPAARSGKVIIPCQPRAAPKATV 445
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K ++ + R I +G L++ +S+ D G Y+C A N G S G ++ + +
Sbjct: 446 LWTKGTELLTNSSRVTITADGTLILQNISKSDEGKYTCFAENFMGKANSTG-ILSVRDAT 504
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE--LETPNINID 239
P I NL L+C A + +D+ + W+ + I ++D +E ++
Sbjct: 505 KITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDFPI-DLDKSEGHYRRASVKEA 563
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA +G Y C ++ V S T+ V GPPG PGGV V ++ T+ + W
Sbjct: 564 VGDLAIVNAQLKHSGRYTCTAQTVVDSTSESATLTVRGPPGPPGGVVVRDIGDTTVQLSW 623
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G N PI Y I ART ++ W + + + E G E + L+PW YEF
Sbjct: 624 SRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIE-----GNAETAQVVNLIPWMDYEF 678
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L I+W P R+ QN
Sbjct: 679 RVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNELIINWTPTLRDYQNGDG 738
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +RKK E+ + + ++ V R S YT +EVK++A N G GPES
Sbjct: 739 FGYILSFRKKGTQEWLTARVPHAESLHY-VYRNESIGPYTPFEVKIKAYNRKGEGPESLT 797
Query: 480 VTIW 483
++
Sbjct: 798 AIVY 801
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLK-- 73
P ++Y W LLN + R F+ + E D Y C A + +
Sbjct: 157 PGLSYRW-----LLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFI 211
Query: 74 TRYSSAQLRVLTLK--------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
T+ ++ L+L PS K + ++TYA G VT+ C P P+ W+K
Sbjct: 212 TKSVFSKFSQLSLAAEDARQYAPSIKAK-FPADTYALTGQMVTLECFAFGNPVPRIKWRK 270
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ GS + I L I V +D G Y C A N+ G D +GR+I+ P + +
Sbjct: 271 ---LDGSQTSQWISSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDV 327
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ A LR S A W +G + + + I + GG L
Sbjct: 328 I---TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQN-------RIEVSGGELRF 377
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ D+G Y+CV ++ G + + V+
Sbjct: 378 SKLVLEDSGMYQCVAENKHGTVYASAELTVQA 409
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 107/289 (37%), Gaps = 34/289 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG L + RY + L I +D YQC
Sbjct: 52 VTLMCRARANPPATYRWKMNGTELK-----MGPDSRYRLVAGDLVISNPVKAKDAGSYQC 106
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWK 124
A N T S A LR L+ F E A EG V C+P P + W
Sbjct: 107 VATNARGTVVSREASLRFGFLQ-EFSAEEREPVKIA-EGWGVMFTCSPPPHYPGLSYRWL 164
Query: 125 KDG--NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATN----VHGMDESKGRLIVL 177
+ N I + GRR + + GNL I+ D G YSC AT+ + SK + L
Sbjct: 165 LNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSL 224
Query: 178 -------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ PS + P + + L C A + RI L+
Sbjct: 225 AAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPV-----------PRIKWRKLDG 273
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+T LL I N F D G YEC ++ G+ + + +I+ P
Sbjct: 274 SQTSQWISSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQP 322
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 178/488 (36%), Gaps = 37/488 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P T W + ELL + + D I N+ + D Y C A+N
Sbjct: 435 CQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNI-------SKSDEGKYTCFAEN 487
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGN 128
+ S+ +L+++ + K S G N+T+ C+ P F W D
Sbjct: 488 FMGKANSTG---ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDF 544
Query: 129 II------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I G R + E G+L I SG Y+CTA V +D + +
Sbjct: 545 PIDLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTV--VDSTSESATLTVRGP 602
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ +QL S + +A + N ++ T +NI+G
Sbjct: 603 PGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSN-KWKQMRTNPVNIEGN 661
Query: 242 LLEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGPPGLPGGVQVVEVHKTS 294
+ +YE V ++ VG+ S ++ I P P G+
Sbjct: 662 AETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNE 721
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
I WT + + + I T ++ V E Y R E+ + P+
Sbjct: 722 LIINWTPTLRDYQNGDGFGYILSFRKKGTQEWLTARVPHAESLHYVYRNES-----IGPY 776
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ +E K+ A N G G P S + + ++P AP R+ ++ +SWEP+ +
Sbjct: 777 TPFEVKIKAYNRKGEG-PESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGD 835
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
+ Y+I + K D E ++ ++ G V A + T+Y V V+A N G G
Sbjct: 836 MTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSA--HVTGLNPNTKYHVSVRAYNRAGAG 893
Query: 475 PESEVVTI 482
P S I
Sbjct: 894 PPSPSTNI 901
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 82/210 (39%), Gaps = 34/210 (16%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG---NVTIFCNPEAAPKPKFVWKKDGNIIGS 132
+ AQ + P F+++P + T EG VT+ C A P + WK +G +
Sbjct: 20 WCQAQSGTRSYGPVFEEQP--AHTLFPEGSAEEKVTLMCRARANPPATYRWKMNGTELKM 77
Query: 133 G-GRRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLP 187
G R G+L+IS PV D+G Y C ATN G E+ R L S E+ P
Sbjct: 78 GPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEEREP 137
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------ 240
K IA + CS ++Y W N E PN I DG
Sbjct: 138 VK--IAEGWGVMFTCSP-PPHYPGLSYRWLLN------------EFPNFIPADGRRFVSQ 182
Query: 241 --GLLEITNASFADAGEYECVVKSTVGKIS 268
G L I +D G Y C S + I+
Sbjct: 183 TTGNLYIAKTEASDLGNYSCFATSHIDFIT 212
>gi|344236691|gb|EGV92794.1| Contactin-2 [Cricetulus griseus]
Length = 1008
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 237/484 (48%), Gaps = 18/484 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L L+ E D
Sbjct: 309 DIGSNLRWACAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 360
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 361 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATI 420
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 421 LWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 479
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL--NELETPNINID 239
P I NL L+C A + +D+ + WT + I N D ++
Sbjct: 480 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPI-NFDKPGGHYRRASVKET 538
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W
Sbjct: 539 IGDLTILNAQLRHGGKYMCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQVSW 598
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G N PI Y + ART + W V + + E G E + L+PW YEF
Sbjct: 599 SRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEF 653
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 654 RVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELIINWTPMSREYQNGDG 713
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 714 FGYLLSFRRQGSSVWQTARVPG-ADAQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLT 772
Query: 480 VTIW 483
++
Sbjct: 773 ALVY 776
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 118/291 (40%), Gaps = 42/291 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG +N LE R+ + L I +D +YQC
Sbjct: 31 VTLACRARASPPATYRWKMNGTDMN-----LEPGSRHQLMGGNLVIMSPTKAQDAGVYQC 85
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 86 LASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 143
Query: 124 -KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 144 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 201
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + PP+ + + L C A +I +
Sbjct: 202 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFG---------------KIKWRKV 246
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + ++V+ P
Sbjct: 247 DGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIVVQAQP 297
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 108/273 (39%), Gaps = 36/273 (13%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 136 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 189
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C K W+
Sbjct: 190 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFG----KIKWR 244
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR++V P + +
Sbjct: 245 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIVVQAQPEWLK 301
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 302 VI-SDTEADIGSNLRWACAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDLR 351
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 352 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 384
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +L++SWE + +
Sbjct: 750 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWESV-Q 807
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ + T+Y V V+A N G
Sbjct: 808 QDTNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLYPNTKYHVTVRAYNRAG 865
Query: 473 PGPES 477
GP S
Sbjct: 866 TGPAS 870
>gi|149036849|gb|EDL91467.1| contactin 4, isoform CRA_b [Rattus norvegicus]
Length = 639
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 191/374 (51%), Gaps = 15/374 (4%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL ++R I+ L I +N D MYQC A
Sbjct: 269 WECKANGRPKPTYRWLKNGD-------PLLTRERIQIEQGTLNITIVNLS-DAGMYQCVA 320
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ Y+SA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 321 ENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 380
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +V+ P+ P
Sbjct: 381 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPS 439
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 440 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 499
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 500 IQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 559
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W VS + + VD G+ + L PW YEF+ +A N +
Sbjct: 560 PITMYVIQARTPFSVGWQAVS--TVPELVD---GKTFTATVVGLNPWVEYEFRTVAANVI 614
Query: 368 GYGEPSSPSPQYNT 381
G GEPS PS + T
Sbjct: 615 GIGEPSRPSEKRRT 628
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 122/309 (39%), Gaps = 57/309 (18%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDSGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKR-------------------PLESETYAGE------ 103
N T S A+L+ L+ +FK R P S GE
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTRTRSTVSVRRGQGMVLLCGPPPHSGGVMGEYEPKIE 162
Query: 104 -----------GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSR 151
G V + C P P +W++ DG I RR +G L I +
Sbjct: 163 VQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SSGILEIPNFQQ 221
Query: 152 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 211
+D+G Y C A N G + +KG++ P++ Q+ I +A ++ C A+
Sbjct: 222 EDAGSYECVAENSRGKNIAKGQVTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--K 278
Query: 212 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--ST 269
Y W NG + L I I+ G L IT + +DAG Y+CV ++ G I S
Sbjct: 279 PTYRWLKNGDPL-------LTRERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIYASA 331
Query: 270 KTTVIVEGP 278
+ +VI E P
Sbjct: 332 ELSVIAESP 340
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 102/264 (38%), Gaps = 41/264 (15%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P DSG Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS---------AHTEELLDVAYIWTHNGVRIGNMDLNELE----TPNI---NIDG--- 240
L C E ++V + T + + L P I DG
Sbjct: 142 LLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPI 201
Query: 241 ----------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-E 289
G+LEI N DAG YECV +++ GK K V P VQ++ +
Sbjct: 202 ARKARRHKSSGILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNW---VQIIND 258
Query: 290 VHKTSATIQWTDGATNGRPITHYK 313
+H + + NGRP Y+
Sbjct: 259 IHVAMEESVFWECKANGRPKPTYR 282
>gi|354478087|ref|XP_003501247.1| PREDICTED: contactin-2 [Cricetulus griseus]
Length = 1040
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 237/484 (48%), Gaps = 18/484 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L L+ E D
Sbjct: 341 DIGSNLRWACAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 392
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 393 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATI 452
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 453 LWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 511
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL--NELETPNINID 239
P I NL L+C A + +D+ + WT + I N D ++
Sbjct: 512 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPI-NFDKPGGHYRRASVKET 570
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W
Sbjct: 571 IGDLTILNAQLRHGGKYMCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQVSW 630
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G N PI Y + ART + W V + + E G E + L+PW YEF
Sbjct: 631 SRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEF 685
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 686 RVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELIINWTPMSREYQNGDG 745
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 746 FGYLLSFRRQGSSVWQTARVPG-ADAQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLT 804
Query: 480 VTIW 483
++
Sbjct: 805 ALVY 808
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 119/291 (40%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG +N LE R+ + L I +D +YQC
Sbjct: 59 VTLACRARASPPATYRWKMNGTDMN-----LEPGSRHQLMGGNLVIMSPTKAQDAGVYQC 113
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 114 LASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 171
Query: 124 -KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 172 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 229
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + PP+ + + L C A + RI +
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 278
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + ++V+ P
Sbjct: 279 DGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIVVQAQP 329
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 164 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 217
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C P P+ W+
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFGNPVPRIKWR 276
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR++V P + +
Sbjct: 277 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIVVQAQPEWLK 333
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 334 VI-SDTEADIGSNLRWACAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDLR 383
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 384 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +L++SWE + +
Sbjct: 782 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWESV-Q 839
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ + T+Y V V+A N G
Sbjct: 840 QDTNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLYPNTKYHVTVRAYNRAG 897
Query: 473 PGPES 477
GP S
Sbjct: 898 TGPAS 902
>gi|26331270|dbj|BAC29365.1| unnamed protein product [Mus musculus]
Length = 705
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 186/374 (49%), Gaps = 15/374 (4%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 335 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 387 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +IV P+ P
Sbjct: 447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W + D G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNT 381
G GEP PS + T
Sbjct: 681 GIGEPGRPSEKRRT 694
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVVKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 278 P 278
P
Sbjct: 406 P 406
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 34/319 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + D L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKINGTDVD-----IGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYE 184
RR + E GNL I+ V + D G Y+C TN + G ++L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMG 221
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I
Sbjct: 222 EYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKAR 272
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTS 294
+ G+LEI N DAG YECV +++ GK K + P VQ++ ++H
Sbjct: 273 RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVVKGQLTFYAQPNW---VQIINDIHVAM 329
Query: 295 ATIQWTDGATNGRPITHYK 313
+ + NGRP Y+
Sbjct: 330 EESVFWECKANGRPKPTYR 348
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + +
Sbjct: 27 VFVQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVD 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
>gi|441665511|ref|XP_004091817.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6 [Nomascus leucogenys]
Length = 1018
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 232/489 (47%), Gaps = 38/489 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 325 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 376
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-----PEAAPKPK 120
C A+N+ + Y++A+LRVL K + ++++ + CN P P
Sbjct: 377 CAAENKYQIIYANAELRVLG-KSFIYNQQIQND--------ILTSCNYTXSQPNFFPNMA 427
Query: 121 FVWK---KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
WK + S R + E+G+L I V+R D+G Y+C ATN G ++ G LIV
Sbjct: 428 IAWKVGEGSQTLRKSHNRIFLLEDGSLKIHNVTRSDAGSYTCIATNQFGTAKNTGSLIVK 487
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+ P K+ + ++ L C A + +DV ++W NG I DL +
Sbjct: 488 ER-TVITVPPSKMDVTVGESIVLPCQASHDPSIDVVFVWFFNGDVI---DLKKGVAHFER 543
Query: 238 IDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
I G G L I N +G+Y C V++T+ +S +IV GPPG P V+V ++ T+
Sbjct: 544 IGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVKVEDISSTT 603
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ + W G N PI + I RT ++ W + + G+ ++ L PW
Sbjct: 604 SQLSWRAGPDNNSPIQIFAIQTRTPFSVGW-----QAVATVPEILNGKTYSATVVGLSPW 658
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
YEF+V+AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E
Sbjct: 659 VEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGGSRSELVITWESIPEEL 718
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
QN Y I +R T + E + + V R S + +EVKV N+ G G
Sbjct: 719 QNGEGFGYIIMFRPVGSTTWSKEKVASVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEG 777
Query: 475 PESEVVTIW 483
S V ++
Sbjct: 778 SLSTVTIVY 786
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+Q+++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 33 SQSEVILNCAANGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAISSPHTDQDIG 87
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 88 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 142
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 143 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 202
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 203 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSSLPG 262
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 263 KVKYSKSQ--------AILEIPNFQQEDEGSYECIASNLRGRNLAKGQLIFYAPP 309
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 186/493 (37%), Gaps = 57/493 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ +W + GE S+TL + ++D L I + D Y C A NQ T
Sbjct: 424 PNMAIAW-KVGE--GSQTLRKSHNRIFLLEDGSLKIHNVT-RSDAGSYTCIATNQFGTAK 479
Query: 77 SSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNI 129
++ L V+T+ PS + + GE ++ + C P FVW +G++
Sbjct: 480 NTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQASHDPSIDVVFVWFFNGDV 531
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + + SG Y CT + +IV P
Sbjct: 532 IDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPGPP 591
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + + + L R + + I T +G + + P I ++G
Sbjct: 592 EDVKVEDISSTTSQLSWRAGPDNNSPIQIFAIQTRTPFSVGWQAVATV--PEI-LNGKTY 648
Query: 244 EITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHK 292
T + EYE V +++G + TK +V V P + GG +
Sbjct: 649 SATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGG----SR 704
Query: 293 TSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
+ I W + NG Y I+ R ++TW E V E R+ R E+
Sbjct: 705 SELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVASVESSRFVYRNES---- 757
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
++P S +E KV N G G S+ + Y + D+P AP ++ +SW
Sbjct: 758 -IIPLSPFEVKVGVYNNEGEGSLSTVTIVY-SGEDEPQLAPRGTSVQSFSASEMEVSWNA 815
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + + Y++ + + E ++ GNV I T Y V+A N
Sbjct: 816 IAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKANTIYFASVRAYN 873
Query: 470 DVGPGPESEVVTI 482
G GP S V +
Sbjct: 874 TAGTGPSSPPVNV 886
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 143 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 196
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 197 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 255
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 256 DGSSLP--GKVKYSKSQAILEIPNFQQEDEGSYECIASNLRGRNLAKGQLI-FYAPPEWE 312
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 313 QKIQNTYLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 363
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 364 ITMLNVSDSGVYQCAAEN 381
>gi|74188643|dbj|BAE28065.1| unnamed protein product [Mus musculus]
Length = 887
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 236/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L LN E D
Sbjct: 188 DIGSNLRWGCAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLNLE-DS 239
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 240 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATI 299
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 300 LWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 358
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + + + ++
Sbjct: 359 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETI 418
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 419 GDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 478
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + + E G E + L+PW YEF+
Sbjct: 479 RGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEFR 533
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPS PS + T P APS + GGGG G+L+I+W P+ RE QN
Sbjct: 534 VSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGF 593
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 594 GYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTA 652
Query: 481 TIW 483
++
Sbjct: 653 IVY 655
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + L
Sbjct: 11 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHLDF 64
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C P P+ W+
Sbjct: 65 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFGNPVPRIKWR 123
Query: 125 K-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K DG++ G + L I VS +D G Y C A N G D +GR+IV P +
Sbjct: 124 KVDGSLSPQWGTAE----PTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWL 179
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ + NL+ C+A + V W NG + + + + + G L
Sbjct: 180 KVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDL 229
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ + D+G Y+CV ++ G I + V+
Sbjct: 230 RFSKLNLEDSGMYQCVAENKHGTIYASAELAVQA 263
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 187/491 (38%), Gaps = 54/491 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C+ P T W + E+L + T R + D L IR ++ D Y C A+
Sbjct: 289 CQPRAAPKATILWSKGTEILGNST-------RVTVTLDGTLIIRNIS-RSDEGKYTCFAE 340
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
N + S+ +L+++ + K S G N+T+ C+ P F W D
Sbjct: 341 NFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 397
Query: 128 NII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+ G RR + G+L I G Y+C A V +D + VL
Sbjct: 398 FPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTV--VDGASKEATVLVRG 455
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ +QL S + +A +T + ++ T +NI+G
Sbjct: 456 PPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWKQVRTNPVNIEG 514
Query: 241 GLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLPGGVQVVE 289
+YE V ++ +I TK V P P G+
Sbjct: 515 NAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAV----PSVAPSGLSGGG 570
Query: 290 VHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
TI WT + NG Y + R +S+W + V G + + ++
Sbjct: 571 GAPGELTINWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGADTQYFVYSNDS- 626
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ P++ +E K+ + N G G P S + + ++P AP+++ G ++++S
Sbjct: 627 ----IHPYTPFEVKIRSYNRRGDG-PESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVS 681
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
WEP+ + N + Y+I + K D E ++ ++ G A R+ + T+Y V V+
Sbjct: 682 WEPV-LQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSA--RVTGLYPNTKYHVTVR 738
Query: 467 AINDVGPGPES 477
A N G GP S
Sbjct: 739 AYNRAGTGPAS 749
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 30/186 (16%)
Query: 111 CNPEAA-PKPKFVW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHG 166
CNP A P + W + N I + GR + + GNL I+ + D G YSC AT+
Sbjct: 4 CNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--H 61
Query: 167 MDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 213
+D S + L PS + PP+ + + L C A +
Sbjct: 62 LDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV---- 117
Query: 214 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273
RI ++ +P L+I + SF D G YEC +++ G+ + + +
Sbjct: 118 -------PRIKWRKVDGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRI 170
Query: 274 IVEGPP 279
IV+ P
Sbjct: 171 IVQAQP 176
>gi|54607084|ref|NP_796103.2| contactin-2 precursor [Mus musculus]
gi|51704323|sp|Q61330.2|CNTN2_MOUSE RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
AltName: Full=Axonin-1; AltName: Full=Transient axonal
glycoprotein 1; Short=TAX-1; Flags: Precursor
gi|41946117|gb|AAH66106.1| Contactin 2 [Mus musculus]
gi|148707726|gb|EDL39673.1| mCG12584 [Mus musculus]
Length = 1040
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 236/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L LN E D
Sbjct: 341 DIGSNLRWGCAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLNLE-DS 392
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 393 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATI 452
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 453 LWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 511
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + + + ++
Sbjct: 512 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETI 571
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 572 GDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 631
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + + E G E + L+PW YEF+
Sbjct: 632 RGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEFR 686
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPS PS + T P APS + GGGG G+L+I+W P+ RE QN
Sbjct: 687 VSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGF 746
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 747 GYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTA 805
Query: 481 TIW 483
++
Sbjct: 806 IVY 808
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 119/291 (40%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG +N LE R+ + L I +D +YQC
Sbjct: 59 VTLACRARASPPATYRWKMNGTEMN-----LEPGSRHQLMGGNLVIMSPTKAQDAGVYQC 113
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 114 LASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 171
Query: 124 -KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ +D S +
Sbjct: 172 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HLDFSTKSVFSKFAQL 229
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + PP+ + + L C A + RI +
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 278
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 279 DGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 329
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + L
Sbjct: 164 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHLDF 217
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C P P+ W+
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFGNPVPRIKWR 276
Query: 125 K-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K DG++ G + L I VS +D G Y C A N G D +GR+IV P +
Sbjct: 277 KVDGSLSPQWGTAE----PTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWL 332
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ + NL+ C+A + V W NG + + + + + G L
Sbjct: 333 KVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDL 382
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ + D+G Y+CV ++ G I + V+
Sbjct: 383 RFSKLNLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 190/496 (38%), Gaps = 54/496 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMY 64
+++ C+ P T W + E+L + T R + D L IR ++ D Y
Sbjct: 437 EISIPCQPRAAPKATILWSKGTEILGNST-------RVTVTLDGTLIIRNIS-RSDEGKY 488
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A+N + S+ +L+++ + K S G N+T+ C+ P F
Sbjct: 489 TCFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFT 545
Query: 123 WKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D + G RR + G+L I G Y+C A V +D +
Sbjct: 546 WTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTV--VDGASKEAT 603
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
VL + +QL S + +A +T + ++ T
Sbjct: 604 VLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWKQVRTNP 662
Query: 236 INIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLPGG 284
+NI+G +YE V ++ +I TK V P P G
Sbjct: 663 VNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAV----PSVAPSG 718
Query: 285 VQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ TI WT + NG Y + R +S+W + V G + +
Sbjct: 719 LSGGGGAPGELTINWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGADTQYFVY 775
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
++ + P++ +E K+ + N G G P S + + ++P AP+++ G
Sbjct: 776 SNDS-----IHPYTPFEVKIRSYNRRGDG-PESLTAIVYSAEEEPKVAPAKVWAKGSSSS 829
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++++SWEP+ + N + Y+I + K D E ++ ++ G A R+ + T+Y
Sbjct: 830 EMNVSWEPV-LQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSA--RVTGLYPNTKY 886
Query: 462 EVKVQAINDVGPGPES 477
V V+A N G GP S
Sbjct: 887 HVTVRAYNRAGTGPAS 902
>gi|74188525|dbj|BAE28018.1| unnamed protein product [Mus musculus]
Length = 1040
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 236/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L LN E D
Sbjct: 341 DIGSNLRWGCAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLNLE-DS 392
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 393 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATI 452
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 453 LWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 511
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + + + ++
Sbjct: 512 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETI 571
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 572 GDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 631
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + + E G E + L+PW YEF+
Sbjct: 632 RGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEFR 686
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPS PS + T P APS + GGGG G+L+I+W P+ RE QN
Sbjct: 687 VSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGF 746
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 747 GYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTA 805
Query: 481 TIW 483
++
Sbjct: 806 IVY 808
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 119/291 (40%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG +N LE R+ + L I +D +YQC
Sbjct: 59 VTLACRARASPPATYRWKMNGTEMN-----LEPGSRHQLMGGNLVIMSPTKAQDAGVYQC 113
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 114 LASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 171
Query: 124 -KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ +D S +
Sbjct: 172 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HLDFSTKSVFSKFAQL 229
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + PP+ + + L C A + RI +
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 278
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 279 DGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 329
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + L
Sbjct: 164 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHLDF 217
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C P P+ W+
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFGNPVPRIKWR 276
Query: 125 K-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K DG++ G + L I VS +D G Y C A N G D +GR+IV P +
Sbjct: 277 KVDGSLSPQWGTAE----PTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWL 332
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ + NL+ C+A + V W NG + + + + + G L
Sbjct: 333 KVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDL 382
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ + D+G Y+CV ++ G I + V+
Sbjct: 383 RFSKLNLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 190/496 (38%), Gaps = 54/496 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMY 64
+++ C+ P T W + E+L + T R + D L IR ++ D Y
Sbjct: 437 EISIPCQPRAAPKATILWSKGTEILGNST-------RVTVTLDGTLIIRNIS-RSDEGKY 488
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A+N + S+ +L+++ + K S G N+T+ C+ P F
Sbjct: 489 TCFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFT 545
Query: 123 WKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D + G RR + G+L I G Y+C A V +D +
Sbjct: 546 WTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTV--VDGASKEAT 603
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
VL + +QL S + +A +T + ++ T
Sbjct: 604 VLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWKQVRTNP 662
Query: 236 INIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLPGG 284
+NI+G +YE V ++ +I TK V P P G
Sbjct: 663 VNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAV----PSVAPSG 718
Query: 285 VQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ TI WT + NG Y + R +S+W + V G + +
Sbjct: 719 LSGGGGAPGELTINWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGADTQYFVY 775
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
++ + P++ +E K+ + N G G P S + + ++P AP+++ G
Sbjct: 776 SNDS-----IHPYTPFEVKIRSYNRRGDG-PESLTAIVYSAEEEPKVAPAKVWAKGSSSS 829
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++++SWEP+ + N + Y+I + K D E ++ ++ G A R+ + T+Y
Sbjct: 830 EMNVSWEPV-LQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSA--RVTGLYPNTKY 886
Query: 462 EVKVQAINDVGPGPES 477
V V+A N G GP S
Sbjct: 887 HVTVRAYNRAGTGPAS 902
>gi|149058636|gb|EDM09793.1| contactin 2 [Rattus norvegicus]
Length = 1040
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 236/490 (48%), Gaps = 30/490 (6%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L L+ E D
Sbjct: 341 DIGSNLRWGCAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 392
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 393 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATI 452
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 453 LWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 511
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + +
Sbjct: 512 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASAKETI 571
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 572 GDLTILNAQLRHGGKYTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 631
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + + E G E + L+PW YEF+
Sbjct: 632 RGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEFR 686
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 687 VSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVSREYQNGDGF 746
Query: 421 YYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
Y + +R++ + +Q+ + YGN I YT +EVK+++ N G
Sbjct: 747 GYLLSFRRQGSSSWQTARVPGADAQYFVYGNDSIQP--------YTPFEVKIRSYNRRGD 798
Query: 474 GPESEVVTIW 483
GPES ++
Sbjct: 799 GPESLTALVY 808
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 119/291 (40%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG +N LE R+ + L I +D +YQC
Sbjct: 59 VTLACRARASPPATYRWKMNGTDMN-----LEPGSRHQLMGGNLVIMSPTKTQDAGVYQC 113
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 114 LASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 171
Query: 124 -KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 172 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 229
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + PP+ + + L C A + RI +
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 278
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 279 DGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 329
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 164 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 217
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C P P+ W+
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFGNPVPRIKWR 276
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 277 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 333
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 334 VI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDLR 383
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 384 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 186/495 (37%), Gaps = 52/495 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+++ C+ P T W + E+L + T D L IR ++ D Y
Sbjct: 437 EISILCQPRAAPKATILWSKGTEILGNST------RVTVTSDGTLIIRNIS-RSDEGKYT 489
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 123
C A+N + S+ +L+++ + K S G N+T+ C+ P F W
Sbjct: 490 CFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 546
Query: 124 KKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
D I G RR + G+L I G Y+C A V +D + V
Sbjct: 547 TLDDFPIDFDKPGGHYRRASAKETIGDLTILNAQLRHGGKYTCMAQTV--VDGTSKEATV 604
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
L + +QL S + +A +T + ++ T +
Sbjct: 605 LVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWKQVRTNPV 663
Query: 237 NIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLPGGV 285
NI+G +YE V ++ KI TK V P P G+
Sbjct: 664 NIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAV----PSVAPSGL 719
Query: 286 QVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
I WT + NG Y + R +S+W + V G + +
Sbjct: 720 SGGGGAPGELIINWTPVSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGADAQYFVYG 776
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
++ + P++ +E K+ + N G G P S + + ++P AP+++ G +
Sbjct: 777 NDS-----IQPYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPAKVWAKGSSSSE 830
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+++SWEP+ + N + Y+I + K D E ++ ++ G A R+ T+Y
Sbjct: 831 MNVSWEPV-LQDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLNPNTKYH 887
Query: 463 VKVQAINDVGPGPES 477
V V+A N G GP S
Sbjct: 888 VTVRAYNRAGTGPAS 902
>gi|395838972|ref|XP_003792378.1| PREDICTED: contactin-2 [Otolemur garnettii]
Length = 1005
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 235/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLHWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG V I C+P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLSPVRRLIPAARGGEVIIPCHPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYQRANVKETV 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLSILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDISDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMAREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESIRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I N SF D G YEC +++ G+ + + VIV+ P
Sbjct: 281 SPQWATAEPTLQIPNISFEDEGTYECEAENSKGRDTVQGRVIVQAQP 327
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 122/314 (38%), Gaps = 48/314 (15%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I +S +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWATAEPTLQIPNISFEDEGTYECEAENSKGRDTVQGRVIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTDADIGSNLHWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------------PGLPGGVQVVEVH 291
+ S D+G Y+CV ++ G I + V+ P GG ++ H
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLSPVRRLIPAARGGEVIIPCH 441
Query: 292 KTS---ATIQWTDG 302
+ A + W+ G
Sbjct: 442 PRAAPKAVVLWSKG 455
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G + I+ R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAG-LDIS-ARVTGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SS + T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSVRGSPTTFGPVFEDQPL-SLLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|402857489|ref|XP_003893286.1| PREDICTED: contactin-2 [Papio anubis]
Length = 1040
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L +SW P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVSWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGEGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGEG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSPTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|6981632|ref|NP_037016.1| contactin-2 precursor [Rattus norvegicus]
gi|114736|sp|P22063.1|CNTN2_RAT RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
AltName: Full=Axonin-1; AltName: Full=Transient axonal
glycoprotein 1; Short=TAX-1; Flags: Precursor
gi|207149|gb|AAA42201.1| axonal glycoprotein (TAG-1) precursor [Rattus norvegicus]
Length = 1040
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 236/490 (48%), Gaps = 30/490 (6%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L L+ E D
Sbjct: 341 DIGSNLRWGCAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 392
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 393 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATI 452
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 453 LWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 511
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + +
Sbjct: 512 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASAKETI 571
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 572 GDLTILNAHVRHGGKYTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 631
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + + E G E + L+PW YEF+
Sbjct: 632 RGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEFR 686
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 687 VSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVSREYQNGDGF 746
Query: 421 YYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
Y + +R++ + +Q+ + YGN I YT +EVK+++ N G
Sbjct: 747 GYLLSFRRQGSSSWQTARVPGADAQYFVYGNDSIQP--------YTPFEVKIRSYNRRGD 798
Query: 474 GPESEVVTIW 483
GPES ++
Sbjct: 799 GPESLTALVY 808
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 119/291 (40%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG +N LE R+ + L I +D +YQC
Sbjct: 59 VTLACRARASPPATYRWKMNGTDMN-----LEPGSRHQLMGGNLVIMSPTKTQDAGVYQC 113
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 114 LASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 171
Query: 124 -KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 172 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 229
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + PP+ + + L C A + RI +
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 278
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 279 DGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 329
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 164 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 217
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C P P+ W+
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFGNPVPRIKWR 276
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 277 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 333
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 334 VI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDLR 383
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 384 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 186/495 (37%), Gaps = 52/495 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+++ C+ P T W + E+L + T D L IR ++ D Y
Sbjct: 437 EISILCQPRAAPKATILWSKGTEILGNST------RVTVTSDGTLIIRNIS-RSDEGKYT 489
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 123
C A+N + S+ +L+++ + K S G N+T+ C+ P F W
Sbjct: 490 CFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 546
Query: 124 KKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
D I G RR + G+L I G Y+C A V +D + V
Sbjct: 547 TLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTV--VDGTSKEATV 604
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
L + +QL S + +A +T + ++ T +
Sbjct: 605 LVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWKQVRTNPV 663
Query: 237 NIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLPGGV 285
NI+G +YE V ++ KI TK V P P G+
Sbjct: 664 NIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAV----PSVAPSGL 719
Query: 286 QVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
I WT + NG Y + R +S+W + V G + +
Sbjct: 720 SGGGGAPGELIINWTPVSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGADAQYFVYG 776
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
++ + P++ +E K+ + N G G P S + + ++P AP+++ G +
Sbjct: 777 NDS-----IQPYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPAKVWAKGSSSSE 830
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+++SWEP+ + N + Y+I + K D E ++ ++ G A R+ T+Y
Sbjct: 831 MNVSWEPV-LQDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLNPNTKYH 887
Query: 463 VKVQAINDVGPGPES 477
V V+A N G GP S
Sbjct: 888 VTVRAYNRAGTGPAS 902
>gi|52138691|ref|NP_001004395.1| contactin-2 precursor [Gallus gallus]
gi|114735|sp|P28685.1|CNTN2_CHICK RecName: Full=Contactin-2; AltName: Full=Axonin-1; Flags: Precursor
gi|62853|emb|CAA44815.1| axonin-1 [Gallus gallus]
Length = 1036
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 236/484 (48%), Gaps = 18/484 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W+C A G P W R+G+ PL Q+R + L L E D
Sbjct: 334 DIGSDLRWSCVASGKPRPAVRWLRDGQ-------PLASQNRIEVSGGELRFSKLVLE-DS 385
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P++ A G V I C P AAPK
Sbjct: 386 GMYQCVAENKHGTVYASAELTVQALAPDFRLNPVKRLIPAARSGKVIIPCQPRAAPKATV 445
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K ++ + R I +G L++ +S+ D G Y+C A N G S G ++ + +
Sbjct: 446 LWTKGTELLTNSSRVTITADGTLILQNISKSDEGKYTCFAENFMGKANSTG-ILSVRDAT 504
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE--LETPNINID 239
P I NL L+C A + +D+ + W+ + I ++D +E ++
Sbjct: 505 KITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDFPI-DLDKSEGHYRRASVKEA 563
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA +G Y C ++ V S T+ V GPPG PGGV V ++ T+ + W
Sbjct: 564 VGDLAIVNAQLKHSGRYTCTAQTVVDSTSESATLTVRGPPGPPGGVVVRDIGDTTVQLSW 623
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G N PI Y I ART ++ W + + + E G E + L+PW YEF
Sbjct: 624 SRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIE-----GNAETAQVVNLIPWMDYEF 678
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L I+W P R+ QN
Sbjct: 679 RVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNELIINWTPTLRDYQNGDG 738
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +RKK + + + ++ V R S YT +EVK++A N G GPES
Sbjct: 739 FGYILSFRKKGTQGWLTARVPHAESLHY-VYRNESIGPYTPFEVKIKAYNRKGEGPESLT 797
Query: 480 VTIW 483
++
Sbjct: 798 AIVY 801
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLK-- 73
P ++Y W LLN + R F+ + E D Y C A + +
Sbjct: 157 PALSYRW-----LLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFI 211
Query: 74 TRYSSAQLRVLTLK--------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
T+ ++ L+L PS K + ++TYA G VT+ C P P+ W+K
Sbjct: 212 TKSVFSKFSQLSLAAEDARQYAPSIKAK-FPADTYALTGQMVTLECFAFGNPVPQIKWRK 270
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ GS + + L I V +D G Y C A N+ G D +GR+I+ P + +
Sbjct: 271 ---LDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDV 327
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ A LR S A W +G + + + I + GG L
Sbjct: 328 I---TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQN-------RIEVSGGELRF 377
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ D+G Y+CV ++ G + + V+
Sbjct: 378 SKLVLEDSGMYQCVAENKHGTVYASAELTVQA 409
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 110/291 (37%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T TC A P TY W NG L + RY + L I +D YQC
Sbjct: 52 VTLTCRARANPPATYRWKMNG-----TELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQC 106
Query: 67 RAKNQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFV 122
A N T R +S + L + ++ P++ EG V C+P P +
Sbjct: 107 VATNARGTVVSREASLRFGFLQEFSAEERDPVK----ITEGWGVMFTCSPPPHYPALSYR 162
Query: 123 WKKDG--NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATN----VHGMDESKGRLI 175
W + N I + GRR + + GNL I+ D G YSC AT+ + SK +
Sbjct: 163 WLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQL 222
Query: 176 VL-------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + PS + P + + L C A + + + L
Sbjct: 223 SLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW-----------RKL 271
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +T LL I N F D G YEC ++ G+ + + +I+ P
Sbjct: 272 DGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQP 322
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 178/488 (36%), Gaps = 37/488 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P T W + ELL + + D I N+ + D Y C A+N
Sbjct: 435 CQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNI-------SKSDEGKYTCFAEN 487
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGN 128
+ S+ +L+++ + K S G N+T+ C+ P F W D
Sbjct: 488 FMGKANSTG---ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDF 544
Query: 129 II------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I G R + E G+L I SG Y+CTA V +D + +
Sbjct: 545 PIDLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTV--VDSTSESATLTVRGP 602
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ +QL S + +A + N ++ T +NI+G
Sbjct: 603 PGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSN-KWKQMRTNPVNIEGN 661
Query: 242 LLEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGPPGLPGGVQVVEVHKTS 294
+ +YE V ++ VG+ S ++ I P P G+
Sbjct: 662 AETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNE 721
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
I WT + + + I T ++ V E Y R E+ + P+
Sbjct: 722 LIINWTPTLRDYQNGDGFGYILSFRKKGTQGWLTARVPHAESLHYVYRNES-----IGPY 776
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ +E K+ A N G G P S + + ++P AP R+ ++ +SWEP+ +
Sbjct: 777 TPFEVKIKAYNRKGEG-PESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGD 835
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
+ Y+I + K D E ++ ++ G V A + T+Y V V+A N G G
Sbjct: 836 MTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSA--HVTGLNPNTKYHVSVRAYNRAGAG 893
Query: 475 PESEVVTI 482
P S I
Sbjct: 894 PPSPSTNI 901
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 84/212 (39%), Gaps = 38/212 (17%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG---NVTIFCNPEAAPKPKFVWKKDGNIIGS 132
+ AQ + + P F+++P + T EG VT+ C A P + WK +G +
Sbjct: 20 WCQAQSGMRSYGPVFEEQP--AHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKM 77
Query: 133 G-GRRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLP 187
G R G+L+IS PV D+G Y C ATN G E+ R L S E+ P
Sbjct: 78 GPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDP 137
Query: 188 PKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG---- 240
KIT + CS H L +Y W N E PN I DG
Sbjct: 138 VKIT--EGWGVMFTCSPPPHYPAL---SYRWLLN------------EFPNFIPADGRRFV 180
Query: 241 ----GLLEITNASFADAGEYECVVKSTVGKIS 268
G L I +D G Y C S + I+
Sbjct: 181 SQTTGNLYIAKTEASDLGNYSCFATSHIDFIT 212
>gi|291402553|ref|XP_002717495.1| PREDICTED: contactin 2 [Oryctolagus cuniculus]
Length = 1040
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 232/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVSAGDLRFSRLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG VTI C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEVTIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 451 LWSKGTEILANSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ +IWT + I + +
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFIWTLDDFPIDFDKPGGHYRRASAKETV 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ TS + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTSVQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG G+PS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VLASNILGTGKPSGPSSRIRTKEAAPSVAPSGLSGGGGAPGELVVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSASWQTAQVSG-ADAQYFVYSNESIQPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPAETYALAGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVSAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSRLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 116/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + L R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LAPGSRHQLMGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+AG G V + CNP A P + W +
Sbjct: 116 PVGTVVSREAVLRFGFLQEFSKEERDPVKTHAGWG--VMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + A + + L C A + RI ++
Sbjct: 232 EDPRLFAPSIKARFPAETYALAGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 81/206 (39%), Gaps = 39/206 (18%)
Query: 85 TLKPSFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKI 138
T P F+++PL E T V + C A+P + WK +G + + G R
Sbjct: 34 TFGPVFEEQPLGLLFPEESTEE----QVMLACRARASPPATYRWKMNGTEMKLAPGSRHQ 89
Query: 139 FENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPPKITIAA 194
GNL+I +P D+G+Y C A+N G E+ R L S E+ P K
Sbjct: 90 LMGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHAGW 149
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--------GLLEI 245
L AH L +Y W N E PN I DG G L I
Sbjct: 150 GVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQTTGNLYI 194
Query: 246 TNASFADAGEYECVVKSTVGKISTKT 271
+ +D G Y C+ S + STK+
Sbjct: 195 ARTNASDLGNYSCLATSHM-DFSTKS 219
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P P++I G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPKVVPTKIWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + + D E ++ ++ G A+V T+Y V V+A N G
Sbjct: 838 QDVNGILLGYEIRYWRVGDKEAAADRVRTAGLDTSALVT--GLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
>gi|348578147|ref|XP_003474845.1| PREDICTED: contactin-2-like [Cavia porcellus]
Length = 1041
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 234/484 (48%), Gaps = 18/484 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D A+L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 340 DIGANLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 391
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 392 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIACQPRAAPKATV 451
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + G L+I +SR D G Y+C A N G S G L V +
Sbjct: 452 LWSKGTEILVNSSRVTVTPGGTLIIRNISRSDEGKYTCFAENFMGKANSTGVLSVRDA-T 510
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL--NELETPNINID 239
P I NL L+C A + +D+ + WT + I N D ++
Sbjct: 511 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPI-NFDKPGGHYRRASVKET 569
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W
Sbjct: 570 VGDLMILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDISDTTVQLSW 629
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G N PI Y + ART W V + E G E + L PW YEF
Sbjct: 630 SRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEF 684
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 RVLASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDG 744
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 FGYLLSFRRQGSSGWQTARVPG-ADAQYFVYSNESIQPYTPFEVKIRSYNQRGDGPESLT 803
Query: 480 VTIW 483
++
Sbjct: 804 AIVY 807
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 113/274 (41%), Gaps = 34/274 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 163 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 216
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P W+
Sbjct: 217 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPMIKWR 275
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 276 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 332
Query: 185 QLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ + I A NL+ C+A + V W NG + + + + + G L
Sbjct: 333 VISDTEADIGA--NLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDL 381
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 RFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 415
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 113/293 (38%), Gaps = 36/293 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T C A P TY W NG + LE R+ + L I +D +
Sbjct: 55 EEQVTLACRARASPPATYRWKMNGTEMK-----LEPDSRHQLVGGNLVIINPTKAQDAGV 109
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFV 122
YQC A N + T S + F K + A EG V + CNP A P +
Sbjct: 110 YQCLASNPVGTVVSREAVLRFGFLQEFSKEERDP-VKAHEGWGVMLPCNPPAHYPGLSYR 168
Query: 123 W--KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--- 176
W + N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 169 WLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFA 226
Query: 177 ----------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L PS + P + + + L C A + + +
Sbjct: 227 QLNLAAEDPRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPMIKW-----------R 275
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 276 KVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 328
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N+ G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 781 PYTPFEVKIRSYNQRGDG-PESLTAIVYSAEEEPRVAPAKVWAKGVSSSEMNVTWEPV-Q 838
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G +A V S T+Y V V+A N G
Sbjct: 839 QDVNGILLGYEIRYWKAGDKEAAADRVRTAGLETVACVT--SLQPNTKYHVTVRAYNRAG 896
Query: 473 PGPES 477
GP S
Sbjct: 897 TGPAS 901
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 89/219 (40%), Gaps = 47/219 (21%)
Query: 76 YSSAQLRVLTLKPSFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN-- 128
+S AQ+ T P F+ +PL E T VT+ C A+P + WK +G
Sbjct: 26 WSLAQVTSATFGPVFEDQPLGLLFPEESTEE----QVTLACRARASPPATYRWKMNGTEM 81
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQ 185
+ R ++ ++I+P D+G+Y C A+N G E+ R L S E+
Sbjct: 82 KLEPDSRHQLVGGNLVIINPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEER 141
Query: 186 LPPKITIAAHR--NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG 240
P + AH + L C+ AH L +Y W N E PN I DG
Sbjct: 142 DP----VKAHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDG 182
Query: 241 --------GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 183 RHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 220
>gi|197098330|ref|NP_001124990.1| contactin-2 precursor [Pongo abelii]
gi|55726609|emb|CAH90069.1| hypothetical protein [Pongo abelii]
Length = 1040
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFADNFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 112/273 (41%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL ++ PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLVAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLVA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|355558857|gb|EHH15637.1| hypothetical protein EGK_01752 [Macaca mulatta]
Length = 1040
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 232/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGEGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGEG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSPTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|388452968|ref|NP_001252701.1| contactin-2 precursor [Macaca mulatta]
gi|355782630|gb|EHH64551.1| hypothetical protein EGM_17796 [Macaca fascicularis]
gi|387542506|gb|AFJ71880.1| contactin-2 precursor [Macaca mulatta]
Length = 1040
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGEGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGEG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSPTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|193784931|dbj|BAG54084.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGELL S Q+R + L L+ E D
Sbjct: 127 DIGSNLRWGCAAAGKPRPTVRWLRNGELLAS-------QNRVEVLAGDLRFSKLSLE-DS 178
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 179 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 238
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 239 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 297
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 298 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 357
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 358 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 417
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 418 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 472
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 473 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 532
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 533 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 591
Query: 481 TIW 483
++
Sbjct: 592 LVY 594
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 14/192 (7%)
Query: 86 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
PS K R +ETYA G VT+ C P P+ W+K GS + L
Sbjct: 25 FAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWRKAD---GSLSPQWTTAEPTLQ 80
Query: 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 205
I VS +D G Y C A N G D +GR+IV P + + + NL+ C+A
Sbjct: 81 IPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAA 139
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ V W NG + + + + + G L + S D+G Y+CV ++ G
Sbjct: 140 GKPRPTVR--WLRNGELLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHG 190
Query: 266 KISTKTTVIVEG 277
I + V+
Sbjct: 191 TIYASAELAVQA 202
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 568 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 625
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 626 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 683
Query: 473 PGPES 477
GP S
Sbjct: 684 TGPAS 688
>gi|397504882|ref|XP_003823009.1| PREDICTED: contactin-2 [Pan paniscus]
Length = 1040
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 83/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTAFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|168272854|dbj|BAG10266.1| contactin-2 precursor [synthetic construct]
Length = 1040
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGELL S Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGELLAS-------QNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGELLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|306921221|dbj|BAJ17690.1| contactin 2 [synthetic construct]
Length = 1040
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGELL S Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGELLAS-------QNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGELLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 110/286 (38%), Gaps = 36/286 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKDG 127
+ T S + F K + A EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP-VKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFP 174
Query: 128 NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 175 NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAAE 232
Query: 177 ---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L PS + P + + + L C A + RI ++ +
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSLS 281
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 282 PQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 41/216 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDP- 142
Query: 189 KITIAAHR--NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--- 240
+ AH + L C+ AH L +Y W N E PN I DG
Sbjct: 143 ---VKAHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHF 184
Query: 241 -----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 185 VSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|332811558|ref|XP_514131.3| PREDICTED: contactin-2 [Pan troglodytes]
Length = 1005
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|51476685|emb|CAH18318.1| hypothetical protein [Homo sapiens]
Length = 865
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 234/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGELL S Q+R + L L+ E D
Sbjct: 230 DIGSNLRWGCAAAGKPRPTVRWLRNGELLAS-------QNRVEVLAGDLRFSKLSLE-DS 281
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 282 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 341
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 342 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 400
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 401 KITLAPSSADINLGDNLTLQCRASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 460
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 461 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 520
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 521 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 575
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 576 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 635
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 636 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 694
Query: 481 TIW 483
++
Sbjct: 695 LVY 697
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 53 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 106
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 107 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 165
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 166 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENPKGRDTVQGRIIVQAQPEWLK 222
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 223 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGELLASQN-------RVEVLAGDLR 272
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 273 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 305
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 671 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 728
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 729 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 786
Query: 473 PGPES 477
GP S
Sbjct: 787 TGPAS 791
>gi|410925449|ref|XP_003976193.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Takifugu
rubripes]
Length = 1041
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 235/484 (48%), Gaps = 26/484 (5%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++L W+C A G P + W RNG+ +++ QDR + L I L E D MY
Sbjct: 342 SELLWSCIAAGKPKPSVRWLRNGQSIST-------QDRVEVNGARLKISNLALE-DSGMY 393
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A+N+ T YSSA+LRV P F+ P+ A GG V I C P AAPKP W
Sbjct: 394 QCVAENKHGTIYSSAELRVQVQAPDFRLNPVRKLIPAARGGQVKIECRPRAAPKPSLFWS 453
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ ++ + R + +G L I +SR D G Y+C A N G S G L V +
Sbjct: 454 RGTELLTNSSRVTVAPDGVLSILNISRADEGKYTCFAENYLGKANSTGHLSV-RDATKIT 512
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---- 240
P I N+ L+C A + +D+++ W NGV +DL + P I+G
Sbjct: 513 LAPSNADINQGENVSLQCHAAHDPTMDLSFSWNLNGVM---LDLEDSAGPYHRIEGKENI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA + AG Y C ++ V S ++V GPPG PGG+ V V +TS ++W+
Sbjct: 570 GDLIILNAQLSQAGVYTCTAQTVVDSASAVAKLVVRGPPGPPGGLLVKNVAETSVELRWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y I R +S W + E G E++ L+PW YEF+
Sbjct: 630 RGYDNHSPIGKYVIRGRWALSSQWRQMR-----TEPSNIEGNAESARVIGLMPWMDYEFQ 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS S T P APS +GGGGG +L I+W P+ RE QN
Sbjct: 685 VIASNILGSGEPSMASHTVRTQQAAPTVAPSGLGGGGGDRHELIITWTPMAREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIA--VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y + +++ TE + T + V + V S Y+ + VK++A N G GP S+
Sbjct: 745 GYILAFKR---TEAPTWTTLKIPQVDSSRYVYYNDSLSPYSPFVVKIRAYNCRGEGPFSQ 801
Query: 479 VVTI 482
+ +
Sbjct: 802 IAVV 805
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKT 74
P ++Y WF N E N L E D R+F+ + E+ D Y C +
Sbjct: 156 PALSYRWFIN-EFPN--FLKNEKSDGRWFVSQVTGNLYLAKAEQNDTGNYFCFTTINMDI 212
Query: 75 RYSSA-----QLRVLT------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
S QL VL+ PS K R +ETY G + C P PK W
Sbjct: 213 SSKSTFSRPNQLTVLSDANPRKSTPSIKVR-FPAETYRLAGQTAQLECFAYGNPVPKLRW 271
Query: 124 KK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+K DG + G E L + +S DD GIY C A N G D +GR+ V P +
Sbjct: 272 RKVDGLLPAKSGSS--VEGPTLTLPDLSFDDEGIYECEAYNSQGSDAYQGRISVQAQPQW 329
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
Q+ + L C A + V W NG I D + ++G
Sbjct: 330 L-QVMSDSEVEISSELLWSCIAAGKPKPSVR--WLRNGQSISTQD-------RVEVNGAR 379
Query: 243 LEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
L+I+N + D+G Y+CV ++ G I S + V V+ P
Sbjct: 380 LKISNLALEDSGMYQCVAENKHGTIYSSAELRVQVQAP 417
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 195/504 (38%), Gaps = 69/504 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPER-DPAMYQCRA 68
C P + W R ELL + + R + D VL+I LN R D Y C A
Sbjct: 440 CRPRAAPKPSLFWSRGTELLTNSS-------RVTVAPDGVLSI--LNISRADEGKYTCFA 490
Query: 69 KNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KF 121
+N L S+ L V +TL PS +G NV++ C+ P F
Sbjct: 491 ENYLGKANSTGHLSVRDATKITLAPS--------NADINQGENVSLQCHAAHDPTMDLSF 542
Query: 122 VWKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W +G ++ G R + EN G+L+I +G+Y+CTA V + +L
Sbjct: 543 SWNLNGVMLDLEDSAGPYHRIEGKENIGDLIILNAQLSQAGVYTCTAQTVVDSASAVAKL 602
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
+V P L + A +++LR S + + + G + ++ T
Sbjct: 603 VVRGPPGPPGGL--LVKNVAETSVELRWSRGYDNHSPIGK-YVIRGRWALSSQWRQMRTE 659
Query: 235 NINIDG--------GLLEITNASFADAGEYECVVKSTVGK----ISTKTTVIVEGPPGL- 281
NI+G GL+ + E++ + + +G +++ T + P +
Sbjct: 660 PSNIEGNAESARVIGLMPWMDY------EFQVIASNILGSGEPSMASHTVRTQQAAPTVA 713
Query: 282 PGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
P G+ + I WT A NG + RT TW + ++ +
Sbjct: 714 PSGLGGGGGDRHELIITWTPMAREYQNGDGFGYILAFKRTE-APTWTTL-------KIPQ 765
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ + L P+S + K+ A N G G P S ++ ++P P I
Sbjct: 766 VDSSRYVYYNDSLSPYSPFVVKIRAYNCRGEG-PFSQIAVVHSAEEEPTLGPLGINATAL 824
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 458
++ +SW+P+ + + Y+I + ++++ E ++ ++ G A R+
Sbjct: 825 SAFEIQVSWDPIHQLSTDVLLRGYEIRYWRQHEREAAADRVRTLGQETSA--RVSGLRPS 882
Query: 459 TEYEVKVQAINDVGPGPESEVVTI 482
T Y V V A N G GP S T+
Sbjct: 883 TRYHVAVLAYNSAGTGPSSPRTTV 906
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 40/292 (13%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+C+A P +Y W L+N +PL RY + L I RD YQC A
Sbjct: 54 SCQARASPAASYRW-----LVNGTEVPLGLDLRYTLVAGSLVISSPESVRDTGSYQCLAI 108
Query: 70 NQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW-- 123
N+ T + +S + L P+ + P A EG + C P P + W
Sbjct: 109 NRCGTIVSKAASVKFGYLNDFPTDSRSP----QTAYEGAGTFLACRPPPHYPALSYRWFI 164
Query: 124 KKDGNII---GSGGRRKIFE-NGNLLISPVSRDDSGIYSC-TATNVHGMDESK----GRL 174
+ N + S GR + + GNL ++ ++D+G Y C T N+ +S +L
Sbjct: 165 NEFPNFLKNEKSDGRWFVSQVTGNLYLAKAEQNDTGNYFCFTTINMDISSKSTFSRPNQL 224
Query: 175 IVLHG-------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
VL PS + P + A + QL C A+ + +R +D
Sbjct: 225 TVLSDANPRKSTPSIKVRFPAETYRLAGQTAQLECFAYGNPVPK---------LRWRKVD 275
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+++G L + + SF D G YEC ++ G + + + V+ P
Sbjct: 276 GLLPAKSGSSVEGPTLTLPDLSFDDEGIYECEAYNSQGSDAYQGRISVQAQP 327
>gi|4827022|ref|NP_005067.1| contactin-2 precursor [Homo sapiens]
gi|399092|sp|Q02246.1|CNTN2_HUMAN RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
AltName: Full=Axonin-1; AltName: Full=Transient axonal
glycoprotein 1; Short=TAX-1; Flags: Precursor
gi|36675|emb|CAA48335.1| TAG-1/axonin-1 precursor [Homo sapiens]
gi|871368|emb|CAA47963.1| transient axonal glycoprotein [Homo sapiens]
gi|119611939|gb|EAW91533.1| contactin 2 (axonal), isoform CRA_a [Homo sapiens]
gi|119611940|gb|EAW91534.1| contactin 2 (axonal), isoform CRA_a [Homo sapiens]
Length = 1040
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 110/286 (38%), Gaps = 36/286 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKDG 127
+ T S + F K + A EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP-VKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFP 174
Query: 128 NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 175 NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAAE 232
Query: 177 ---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L PS + P + + + L C A + RI ++ +
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSLS 281
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 282 PQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 41/216 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDP- 142
Query: 189 KITIAAHR--NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--- 240
+ AH + L C+ AH L +Y W N E PN I DG
Sbjct: 143 ---VKAHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHF 184
Query: 241 -----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 185 VSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|395531178|ref|XP_003767659.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Sarcophilus harrisii]
Length = 1059
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 231/483 (47%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNG+ PL Q+R I L L E D
Sbjct: 357 DIGSNLRWGCAAAGKPRPTIRWLRNGD-------PLSSQNRVEISGGDLKFSKLVLE-DS 408
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V P F+ P+ A GG V I C P +APK
Sbjct: 409 GMYQCVAENKHGTIYASAELAVQAFAPDFRLNPVRRLIPAARGGEVIIPCQPRSAPKSIV 468
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R I +G L++ +SR D G Y+C A N G S G L V +
Sbjct: 469 LWSKGTEILVNSSRVTITPDGTLILRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + W +G I + ++
Sbjct: 528 KITLAPSSADINLGENLTLQCHASHDPTMDLTFTWALDGFPIDFDKSGGHYRRASLKETI 587
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S T++V GPPG PGGV V ++ T+ + W+
Sbjct: 588 GDLTILNAQLRHGGKYTCMAQTVVDSTSETATLLVRGPPGPPGGVVVRDISNTTVQLTWS 647
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + AR+ + W V + E G E + L PW YEF+
Sbjct: 648 RGFDNHSPIAKYTLQARSLPDGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 702
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 703 VVASNILGTGEPSGPSSKIRTKESAPTVAPSGLSGGGGAPGELIINWTPMLREYQNGEGF 762
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ +++Q + + V R S YT +EVK++ N G GPES
Sbjct: 763 GYLLSFRRQGSSDWQKAKVSHADALHF-VYRNESVRPYTPFEVKIRGYNRQGEGPESLTT 821
Query: 481 TIW 483
T++
Sbjct: 822 TVY 824
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 34/274 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D A Y C A + +
Sbjct: 180 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DXANYSCLATSHMDF 233
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKR-PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
K+ +S AQL + PS K R PLE TYA G VT+ C P P+ W
Sbjct: 234 ITKSVFSKFAQLNLAAEDSRPSSPSIKARFPLE--TYALVGQQVTLECFAFGNPVPRIKW 291
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+K + S + L I V+ +D G Y C A N G D +KGR+IV P +
Sbjct: 292 RK---LDDSLPPQWATAEPTLQIPSVNFEDEGTYECEAENTKGRDTAKGRIIVQAQPEWL 348
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ + NL+ C+A + + W NG + + + + I GG L
Sbjct: 349 KVI-SDTEADIGSNLRWGCAAAGKPRPTIR--WLRNGDPLSSQN-------RVEISGGDL 398
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ + D+G Y+CV ++ G I + V+
Sbjct: 399 KFSKLVLEDSGMYQCVAENKHGTIYASAELAVQA 432
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 119/290 (41%), Gaps = 28/290 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + C A P TY W NG + LE Y + L I RD
Sbjct: 71 SEEKIALACRARASPPATYRWKMNGT-----EMKLEQDPHYQLVGGNLVIMNPTKTRDAG 125
Query: 63 MYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPK 120
+YQC A N + T S A LR L+ K+ +T+ EG V + CNP A P
Sbjct: 126 VYQCLATNPVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLS 183
Query: 121 FVW--KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+ W + N I + GR + + GNL I+ + D YSC AT+ MD I
Sbjct: 184 YRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDXANYSCLATS--HMD-----FITK 236
Query: 178 HGPSYYEQL--------PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
S + QL P +I A L+ + L+ + + + RI L+
Sbjct: 237 SVFSKFAQLNLAAEDSRPSSPSIKARFPLETYALVGQQVTLEC-FAFGNPVPRIKWRKLD 295
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ P L+I + +F D G YEC ++T G+ + K +IV+ P
Sbjct: 296 DSLPPQWATAEPTLQIPSVNFEDEGTYECEAENTKGRDTAKGRIIVQAQP 345
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ N G G P S + + ++P AP+++ G ++ + WEP+ +
Sbjct: 798 PYTPFEVKIRGYNRQGEG-PESLTTTVYSAEEEPRVAPAKVKAKGTLSSEMDVMWEPVHQ 856
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 857 DDMNGVLLGYEIRYWKDGDKEAAADRVRTAGLDTSA--RVTGLQPNTKYHVTVRAYNRAG 914
Query: 473 PGPES 477
GP S
Sbjct: 915 TGPAS 919
>gi|158260993|dbj|BAF82674.1| unnamed protein product [Homo sapiens]
Length = 1040
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSELSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSELSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 110/286 (38%), Gaps = 36/286 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKDG 127
+ T S + F K + A EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP-VKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFP 174
Query: 128 NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 175 NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAAE 232
Query: 177 ---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L PS + P + + + L C A + RI ++ +
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSLS 281
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 282 PQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 41/216 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDP- 142
Query: 189 KITIAAHR--NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--- 240
+ AH + L C+ AH L +Y W N E PN I DG
Sbjct: 143 ---VKAHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHF 184
Query: 241 -----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 185 VSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|120538513|gb|AAI29987.1| Contactin 2 (axonal) [Homo sapiens]
Length = 1040
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 110/286 (38%), Gaps = 36/286 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKDG 127
+ T S + F K + A EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP-VKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFP 174
Query: 128 NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 175 NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAAE 232
Query: 177 ---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L PS + P + + + L C A + RI ++ +
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSLS 281
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 282 PQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 41/216 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALESQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDP- 142
Query: 189 KITIAAHR--NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--- 240
+ AH + L C+ AH L +Y W N E PN I DG
Sbjct: 143 ---VKAHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHF 184
Query: 241 -----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 185 VSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|444868|prf||1908253A TAG-1 protein (axonin 1)
Length = 1040
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I V+ +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVTFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 110/286 (38%), Gaps = 36/286 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKDG 127
+ T S + F K + A EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP-VKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFP 174
Query: 128 NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 175 NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAAE 232
Query: 177 ---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L PS + P + + + L C A + RI ++ +
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSLS 281
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P L+I + +F D G YEC +++ G+ + + +IV+ P
Sbjct: 282 PQWTTAEPTLQIPSVTFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 41/216 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDP- 142
Query: 189 KITIAAHR--NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--- 240
+ AH + L C+ AH L +Y W N E PN I DG
Sbjct: 143 ---VKAHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHF 184
Query: 241 -----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 185 VSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|47228828|emb|CAG07560.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1049
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 231/504 (45%), Gaps = 44/504 (8%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y+W +NG+ L S DR ++D VL++ L D MYQC
Sbjct: 365 LHWECRANGKPKPSYAWLKNGQQLLS-------GDRITVEDGVLSVPALALS-DAGMYQC 416
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ Y A+L VL P F L + A G VT+ C P+A P +WKK
Sbjct: 417 VAENKHGVIYFVAELMVLASPPDFTGNLLRALLKAKAGTTVTLECKPQAYPVASILWKKG 476
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
I R + +G L ++ VS+ D+G Y+C A N GM + GRL+V P+ Q
Sbjct: 477 NLPIHINDRITLSSDGTLRLANVSKSDAGGYTCFARNRFGMSSTTGRLLVTD-PTRITQG 535
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + I ++ L C ++ +LDV++ W NG I D E G L+ I
Sbjct: 536 PADMEIIVGESIVLPCQVASDPVLDVSFSWAFNGQLIAKGD-GHFELVGGRTAGDLM-IR 593
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N AG+Y CVV + V +S +IV+GPP P V V EV ++A + W+ G NG
Sbjct: 594 NIQLYHAGKYICVVDTDVESLSAVAILIVKGPPSPPDSVTVEEVTDSTAQLAWSRGRDNG 653
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PI +Y + RT + W V + + + +D G + L W YEF+V+A N
Sbjct: 654 SPIVNYFVQTRTPFTVGWQRV--NTVPEIID---GNTLTATVVDLNAWVEYEFRVLARNS 708
Query: 367 LGYGEPSSPSPQYNTP---------------------------ADKPYQAPSRIGGGGGK 399
+G GEPS S + T P AP +GGGGG
Sbjct: 709 VGVGEPSPVSVRTRTEDAGTCEQTVCCYRRWLSRMLRRERALCCAVPDAAPGDVGGGGGS 768
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
+L I+WEP+P E QN + Y I +R + + G V R S ++
Sbjct: 769 RSELVITWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPG-ASRYVYRNDSIAPFS 827
Query: 460 EYEVKVQAINDVGPGPESEVVTIW 483
+ VKV N G GP S VVTI+
Sbjct: 828 PFHVKVGTYNSKGQGPFSPVVTIY 851
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 111/279 (39%), Gaps = 27/279 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQL--- 72
D+ Y+W + N ++ +R F+ Q L I + P D Y C N +
Sbjct: 182 DLAYAW-----VFNEYPYFVQQDNRRFVSQQTGNLYIAKVEPS-DVGNYTCVVTNSVTKG 235
Query: 73 KTRYSSAQLRVLTLKPSFKKRP-----LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
K + S L + T + P A G VT+ C P P+ WK+
Sbjct: 236 KVQSSPTALILRTDGMMGEYEPKIEVNFPDNVSAARGSTVTLECFALGNPVPEITWKRAN 295
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ + + N L I +DD+G Y C A N G + + GRL P + + +
Sbjct: 296 GVPFPSKVKMKYSNAVLEIPSFQQDDTGGYECVAENRMGKNMATGRLAFYAKPQWIQAV- 354
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+A L C A+ + +Y W NG ++ + D I ++ G+L +
Sbjct: 355 KDTALAIEERLHWECRANGKP--KPSYAWLKNGQQLLSGD-------RITVEDGVLSVPA 405
Query: 248 ASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGLPGGV 285
+ +DAG Y+CV ++ G I +++ PP G +
Sbjct: 406 LALSDAGMYQCVAENKHGVIYFVAELMVLASPPDFTGNL 444
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 118/310 (38%), Gaps = 63/310 (20%)
Query: 1 MDNQADLTWTCEAFGVPDVTYS---------------------------WFRNGELLNSE 33
M+ +A LT C+A GVP YS W NG L+N
Sbjct: 45 MEEEATLT--CDAKGVPPPQYSISFIAESSPRPPCRLLLPSGYLLRVGRWSLNGTLIN-- 100
Query: 34 TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN---QLKTRYSSAQLRVLTLKPSF 90
L L+ + R + L I L+ +D MYQC A N + +R +S Q L F
Sbjct: 101 -LGLDRRRR--LSGGNLIISSLDRYQDVGMYQCMAFNTAGAILSRRASLQFAYLD---HF 154
Query: 91 KKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIFEN-GNLLI 146
K S EG V + C P ++ + W + + RR + + GNL I
Sbjct: 155 KVH-TRSAVSVREGQGVVLLCGTPTSSGDLAYAWVFNEYPYFVQQDNRRFVSQQTGNLYI 213
Query: 147 SPVSRDDSGIYSCTATN--VHGMDESKGRLIVLHGPSYYEQLPPKITI--------AAHR 196
+ V D G Y+C TN G +S ++L + PKI + A
Sbjct: 214 AKVEPSDVGNYTCVVTNSVTKGKVQSSPTALILRTDGMMGEYEPKIEVNFPDNVSAARGS 273
Query: 197 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
+ L C A + ++ + NGV + + +LEI + D G Y
Sbjct: 274 TVTLECFALGNPVPEITWK-RANGVPFPS-------KVKMKYSNAVLEIPSFQQDDTGGY 325
Query: 257 ECVVKSTVGK 266
ECV ++ +GK
Sbjct: 326 ECVAENRMGK 335
>gi|432116103|gb|ELK37230.1| Contactin-2 [Myotis davidii]
Length = 962
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 230/483 (47%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D + L W C A G P T W RNGE PL Q R + L L+ + D
Sbjct: 261 DIGSSLRWGCAAAGKPRPTVRWLRNGE-------PLASQTRVEVLAGDLRFSKLSLD-DS 312
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG V I C P AAPK
Sbjct: 313 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEVMIPCQPRAAPKAVV 372
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 373 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 431
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +++ +IW + I + +
Sbjct: 432 KITLAPSSADINLGDNLTLQCHASHDPTMELTFIWALDDFPIDPDKPGGHYRRASAKETV 491
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGG+ V ++ T+ + W+
Sbjct: 492 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGMVVRDIGDTTVQLSWS 551
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 552 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 606
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P+ APS + GGGG G+L ++W P+ RE QN
Sbjct: 607 VIASNILGTGEPSGPSSKIRTKEAAPFVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 666
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ +QS + + V S YT +EVK+++ N G GPES
Sbjct: 667 GYLLSFRRQGSAGWQSARVPG-ADAQFFVYSNESIRPYTPFEVKIRSYNRRGDGPESLTA 725
Query: 481 TIW 483
++
Sbjct: 726 LVY 728
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 109/273 (39%), Gaps = 36/273 (13%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 88 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 141
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C K W+
Sbjct: 142 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPAETYALLGQQVTLECFAFG----KIKWR 196
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 197 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDSVQGRIIVQAQPEWLK 253
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ + +L+ C+A + V W NG + + + + G L
Sbjct: 254 VI-SDMEADIGSSLRWGCAAAGKPRPTVR--WLRNGEPLASQT-------RVEVLAGDLR 303
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 304 FSKLSLDDSGMYQCVAENKHGTIYASAELAVQA 336
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Query: 30 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SAQLRVLTLKP 88
+N + LE R+ + L I +D +YQC A N + T S A LR L+
Sbjct: 1 MNGTEMKLEPGSRHQLVGGNLVIMSPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQE 60
Query: 89 SFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKDGNIIGSGGRRKIFE-NGNL 144
K+ + +AG G V + CNP A P + W + N I + GR + + GNL
Sbjct: 61 FSKEERDPVKAHAGWG--VMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNL 118
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
I+ + D G YSC AT+ MD S + P++ + ++ R A
Sbjct: 119 YIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAAEDPRLFAPS---IKARFPA 173
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELE---TPNINIDGGLLEITNASFADAGEYECVVK 261
T LL T G + +++ +P L+I + SF D G YEC +
Sbjct: 174 ETYALLGQQV--TLECFAFGKIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAE 231
Query: 262 STVGKISTKTTVIVEGPP 279
++ G+ S + +IV+ P
Sbjct: 232 NSKGRDSVQGRIIVQAQP 249
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WE +P+
Sbjct: 702 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEAVPQ 760
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 761 DT-NGVLLGYEIRYWKAGDKEAAADRVRTAGLDTTA--RVTDLHPNTKYHVTVRAYNRAG 817
Query: 473 PGPES 477
GP S
Sbjct: 818 TGPAS 822
>gi|426333444|ref|XP_004028287.1| PREDICTED: contactin-2 [Gorilla gorilla gorilla]
Length = 1040
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLQFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P +APK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRSAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 112/273 (41%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L+
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLQ 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYWWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLETSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYWWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|334322026|ref|XP_001371582.2| PREDICTED: contactin-2-like [Monodelphis domestica]
Length = 1205
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 235/487 (48%), Gaps = 20/487 (4%)
Query: 2 DNQAD----LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP 57
D++AD L W C A G P W RNG+ PL Q+R I L L
Sbjct: 499 DSEADIGSNLHWGCAAAGKPRPIVRWLRNGD-------PLLSQNRVEISGGDLKFSKLVL 551
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E D MYQC A+N+ T Y+SA+L V P F+ P++ A GG V I C P +AP
Sbjct: 552 E-DSGMYQCVAENKHGTIYASAELAVQAFAPDFRLNPVKRLIPAARGGEVIIPCQPRSAP 610
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
K +W K I+ + R I +G L++ +SR D G Y+C A N G S G L V
Sbjct: 611 KSIVLWSKGTEILVNSSRVTITPDGTLILRNISRSDEGKYTCFAENFMGKANSTGILSVR 670
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNI 236
+ P I NL L+C A + +D+ + W+ +G I + N+
Sbjct: 671 DA-TKITLAPSSADINLGENLTLQCHASHDPTMDLTFTWSLDGFPIDFDKSGGHYRRANL 729
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I NA G+Y C+ ++ V S T++V GPPG PGGV V ++ T+
Sbjct: 730 KETIGDLTILNAQLRHGGKYTCMAQTVVDSTSETATLLVRGPPGPPGGVVVRDISNTTVQ 789
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ G N PI Y + AR+ + W V + E G E + L PW
Sbjct: 790 LTWSRGFDNHSPIAKYILQARSLPDGKWKQVRTNPANIE-----GNAETAQVLGLTPWMD 844
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N LG GEPS PS + T P APS + GGGG G+L I+W+P+ RE QN
Sbjct: 845 YEFRVLASNILGTGEPSGPSSKIRTKESAPTIAPSGLSGGGGAPGELIINWKPMLREYQN 904
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R++ +++Q + + + V R S YT +EVK++ N G GPE
Sbjct: 905 GEGFGYILSFRRQGSSDWQRAKVSQADALHF-VYRNESVRPYTPFEVKIRGYNRQGEGPE 963
Query: 477 SEVVTIW 483
S ++
Sbjct: 964 SLTTLVY 970
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 115/275 (41%), Gaps = 36/275 (13%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 326 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 379
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKR-PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
K+ +S AQL + PS K R PLE TYA G VT+ C P P+ W
Sbjct: 380 ITKSVFSKFAQLNLAAEDSRPSPPSIKARFPLE--TYALVGQQVTLECFAFGNPVPRIKW 437
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+K + + + L I +S +D G Y C A N+ G D +KGR+IV P +
Sbjct: 438 RKMDDSLPP---QWATAEPTLQIPSISFEDEGTYECEAENIKGRDIAKGRIIVQAKPEWL 494
Query: 184 EQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ + + I + NL C+A + V W NG + L + I GG
Sbjct: 495 KVISDSEADIGS--NLHWGCAAAGKPRPIVR--WLRNGDPL-------LSQNRVEISGGD 543
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
L+ + D+G Y+CV ++ G I + V+
Sbjct: 544 LKFSKLVLEDSGMYQCVAENKHGTIYASAELAVQA 578
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 118/290 (40%), Gaps = 28/290 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + C A P TY W NG + LE Y + L I +D
Sbjct: 217 SEEKIALACRARASPPATYRWKMNGTEMK-----LEQDPHYQLVGGNLVIMNPTKAKDAG 271
Query: 63 MYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPK 120
+YQC A N + T S A LR L+ K+ +T+ EG V + CNP A P
Sbjct: 272 VYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLS 329
Query: 121 FVW--KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+ W + N I + GR + + GNL I+ + D G YSC AT+ MD I
Sbjct: 330 YRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMD-----FITK 382
Query: 178 HGPSYYEQL--------PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
S + QL P +I A L+ + L+ + + + RI ++
Sbjct: 383 SVFSKFAQLNLAAEDSRPSPPSIKARFPLETYALVGQQVTLE-CFAFGNPVPRIKWRKMD 441
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ P L+I + SF D G YEC ++ G+ K +IV+ P
Sbjct: 442 DSLPPQWATAEPTLQIPSISFEDEGTYECEAENIKGRDIAKGRIIVQAKP 491
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ N G G P S + + ++P AP+++ G ++++ WEP+ +
Sbjct: 944 PYTPFEVKIRGYNRQGEG-PESLTTLVYSAEEEPRVAPAKVKAKGTLSSEMNVMWEPVHQ 1002
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYG-NVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ N + Y+I + K D E ++ ++ G + V + T+Y V V+A N
Sbjct: 1003 DDMNGILLGYEIRYWKDGDKEAAADRVRTAGLDTSAQVTGLQPN---TKYHVTVRAYNRA 1059
Query: 472 GPGPES 477
G GP S
Sbjct: 1060 GTGPAS 1065
>gi|296211445|ref|XP_002752419.1| PREDICTED: contactin-1 [Callithrix jacchus]
Length = 975
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 227/482 (47%), Gaps = 65/482 (13%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVIT--- 502
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
I RN L D N
Sbjct: 503 ---XXXXXXXXIHYQRNFML--------------------------DSN----------- 522
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W+
Sbjct: 523 GELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVGLTWS 582
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G+ N PI+ Y I +T + W + E G EA+ L+PW YEF+
Sbjct: 583 RGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEFR 637
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 638 VVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNNF 697
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 698 GYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVA 756
Query: 481 TI 482
I
Sbjct: 757 VI 758
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNSYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNSYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 20/154 (12%)
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
V + RY + E + P + ++ KV A N G G P S N+ D P +AP
Sbjct: 716 VTNPDTGRYVHKDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAEDAPSEAP 769
Query: 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK----EYGNVG 446
+ +G ++S+ WE + + + Y+I + +D E + L+ EY
Sbjct: 770 TEVGVKVLSSSEISVHWEHVLEKIVES----YQIRYWATHDREVAAHRLQLTSQEYS--- 822
Query: 447 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
R+ + T+Y ++V+A N G GP S+++
Sbjct: 823 ---ARLENLLPDTQYFIEVRACNSAGCGPPSDMI 853
>gi|317418924|emb|CBN80962.1| Contactin-4, partial [Dicentrarchus labrax]
Length = 944
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 195/407 (47%), Gaps = 23/407 (5%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P +Y W +NGE L S ++R + + L+I L D MYQ
Sbjct: 273 SLVWECKATGKPKPSYRWMKNGENLESA------EERVQVANGALSISRLTLS-DTGMYQ 325
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ YS+A+LRV+ + P F + S+T GG+ I C P+ +P W+K
Sbjct: 326 CVAGNKHGEVYSNAELRVIAVAPDFSHNQVRSQTLVKVGGDALIECKPKMSPWGVVSWRK 385
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R I +NGNL I ++ D+G+Y+C A N G+ S G + V P+
Sbjct: 386 GSEPLRESNRVSILDNGNLRIWNATKPDAGLYTCVARNQFGVASSTGSITVKE-PTIITT 444
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLL 243
LP + + ++ L C + L++ + W N + G+ E G +
Sbjct: 445 LPSTLDVTVGESVVLPCQVSHDPSLELKFTWFFNEQVIHFGSHG-GFFEKVGGQHSAGDI 503
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N AG+Y C V++ V IS ++V PG P + V E+ T+A++ W G
Sbjct: 504 MIRNIQLRHAGKYTCAVQTKVDSISIAVDLVV---PGAPTSIHVEEITDTTASLSWRPGP 560
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
N PIT Y I ART ++ W V+ V+G G + + L PW YEF+V
Sbjct: 561 DNHSPITAYTIQARTPFSLGWQAVTTVPEVVG-------GHRLTATVIDLSPWVEYEFRV 613
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+A N +G GEPS PS Q T P P+ + GGGG +L I+WE
Sbjct: 614 LASNTIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSELVITWE 660
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 131/353 (37%), Gaps = 36/353 (10%)
Query: 30 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 89
LN + + Y + L I +LN ++D YQC A N T S +
Sbjct: 3 LNGTEISPKSGSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTFAYLEN 62
Query: 90 FKKRPLESETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIF-ENGNLL 145
FK S EG V + C P +++ + + RR I E GNL
Sbjct: 63 FKTH-RRSSVSVREGQGVVLLCGPPPHSGDLVFSWIFNEYPTFVKQDTRRFISQETGNLY 121
Query: 146 ISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHG--------PSYYEQLPPKITIAAH 195
I+ V D G Y+C TN +G +VL P Q P + +A
Sbjct: 122 IAMVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEIVHVAKG 181
Query: 196 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 255
++L C A + + N R+ ++ ++ G+LEI DAG
Sbjct: 182 STVKLECFALGNPVPSI------NWRRMDSIPFP--RKVDMRKASGVLEIPYFQQEDAGT 233
Query: 256 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 315
YECV +++ G + K + PP L Q V+ ++ W AT G+P Y+
Sbjct: 234 YECVAENSRGMNTVKGKLSFYAPPHLIEKPQDVQ-KLIDESLVWECKAT-GKPKPSYR-- 289
Query: 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 368
W E++ E SI + + T ++ +AGN+ G
Sbjct: 290 --------WMKNGENLESAEERVQVANGALSISRLTLS-DTGMYQCVAGNKHG 333
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 25/260 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQL-KTR 75
D+ +SW N T +D R+ Q+ L I + P D Y C N + KTR
Sbjct: 91 DLVFSWIFN----EYPTFVKQDTRRFISQETGNLYIAMVEPS-DVGNYTCVVTNTVTKTR 145
Query: 76 Y----SSAQLRVLTLKPSFKKRPLESE----TYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ LR + ++ + +E + + +G V + C P P W++
Sbjct: 146 VQGPPTPLVLRSDGVMGEYEPK-IEVQFPEIVHVAKGSTVKLECFALGNPVPSINWRRMD 204
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+I +G L I ++D+G Y C A N GM+ KG+L + P + + P
Sbjct: 205 SIPFPRKVDMRKASGVLEIPYFQQEDAGTYECVAENSRGMNTVKGKL-SFYAPPHLIEKP 263
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ +L C A + +Y W NG + E + + G L I+
Sbjct: 264 QDVQKLIDESLVWECKATGKP--KPSYRWMKNGENL------ESAEERVQVANGALSISR 315
Query: 248 ASFADAGEYECVVKSTVGKI 267
+ +D G Y+CV + G++
Sbjct: 316 LTLSDTGMYQCVAGNKHGEV 335
>gi|431892898|gb|ELK03326.1| Contactin-2 [Pteropus alecto]
Length = 1105
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 232/483 (48%), Gaps = 23/483 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D + L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 411 DIGSSLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 462
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG V I C P +APK
Sbjct: 463 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEVIIPCQPRSAPKAVV 522
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 523 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 581
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL-NELETPNINIDG 240
P I NL L+C A + +D+ +IWT + I + ++
Sbjct: 582 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFIWTLDDFPIDSEKPGGHYRRASVKETV 641
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 642 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 701
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + E G E + L PW+ YEF+
Sbjct: 702 RGFDNHSPIAKYTLQARTPSSGKWKQVRTNPANIE-----GNAETAQVLGLTPWTDYEFR 756
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T + + GGGG G+L ++W P+ RE QN
Sbjct: 757 VIASNILGTGEPSGPSSKIRT-------KEAGLSGGGGAPGELIVNWTPMSREYQNGDGF 809
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 810 GYLLSFRRQGSTSWQTAQVPG-ADAQYFVYSNDSVRPYTPFEVKIRSYNRRGNGPESLTA 868
Query: 481 TIW 483
++
Sbjct: 869 LVY 871
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 116/295 (39%), Gaps = 42/295 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGEL----LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+T C A P TY + G +N + LE R+ + L I +D
Sbjct: 125 VTLACRARASPPATYR-TQEGSCCRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAG 183
Query: 63 MYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPK 120
+YQC A N + T S A LR L+ K+ +T+ EG V + CNP A P
Sbjct: 184 VYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLS 241
Query: 121 FVW--KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV- 176
+ W + N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 242 YRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSK 299
Query: 177 ------------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L PS + P + + + L C A +I
Sbjct: 300 FAQLNLAAEDPRLFAPSIKARFPAETYALVGQQVTLECFAFG---------------KIK 344
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ +P L+I SF D G YEC +++ G+ S + +IV+ P
Sbjct: 345 WRKVDGSLSPQWATAEPTLQIPRVSFEDEGTYECEAENSKGRDSVQGRIIVQAQP 399
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 110/273 (40%), Gaps = 36/273 (13%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 238 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 291
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C K W+
Sbjct: 292 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPAETYALVGQQVTLECFAFG----KIKWR 346
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 347 K---VDGSLSPQWATAEPTLQIPRVSFEDEGTYECEAENSKGRDSVQGRIIVQAQPEWLK 403
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ + +L+ C+A + V W NG + + + + + G L
Sbjct: 404 VI-SDMEADIGSSLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 453
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 454 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 486
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 186/492 (37%), Gaps = 63/492 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P W + E+L NS + + D L IR ++ D Y C A+
Sbjct: 512 CQPRSAPKAVVLWSKGTEILVNSSRVTV-------TPDGTLIIRNIS-RSDEGKYTCFAE 563
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
N + S+ L V +TL PS L G N+T+ C+ P F+
Sbjct: 564 NFMGKANSTGILSVRDATKITLAPSSADINL--------GDNLTLQCHASHDPTMDLTFI 615
Query: 123 WKKDGNIIGS---GG---RRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D I S GG R + E G+L I G Y+C A V +D +
Sbjct: 616 WTLDDFPIDSEKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTV--VDSASKEAT 673
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
VL + +QL S + +A +T + ++ T
Sbjct: 674 VLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPSSGKWKQVRTNP 732
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG-VQVVEVHKTS 294
NI+G +YE V + ++ G P P ++ E +
Sbjct: 733 ANIEGNAETAQVLGLTPWTDYEFRV--------IASNILGTGEPSGPSSKIRTKEAGLSG 784
Query: 295 ATIQWTDGATNGRPITH---------YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
+ N P++ Y + R +++W + V G + + ++
Sbjct: 785 GGGAPGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSW--QTAQVPGADAQYFVYSNDS 842
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P++ +E K+ + N G G P S + + ++P AP+++ G ++++
Sbjct: 843 -----VRPYTPFEVKIRSYNRRGNG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNV 896
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
+W+P+ ++ N + Y+I + K D E ++ ++ G A R+ T+Y V V
Sbjct: 897 TWDPV-QQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVTDLHPNTKYHVTV 953
Query: 466 QAINDVGPGPES 477
+A N GPGP S
Sbjct: 954 RAYNRAGPGPAS 965
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 92/247 (37%), Gaps = 51/247 (20%)
Query: 59 RDPAMYQCRAKNQLKTRY----------SSAQLRVLTLKPSFKKRPLESETYAGEGG--N 106
R PAM R K+ L SSA T P F+ +PL S + E
Sbjct: 66 RTPAMGPLRRKSHLLPLVAVVLVSCPAQSSAPGSQATFGPVFEDQPL-SLLFPEESTEEK 124
Query: 107 VTIFCNPEAAPKPKFV--------WKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGI 156
VT+ C A+P + WK +G + G R GNL+I +P D+G+
Sbjct: 125 VTLACRARASPPATYRTQEGSCCRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGV 184
Query: 157 YSCTATNVHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 213
Y C A+N G E+ R L S E+ P K L AH L +
Sbjct: 185 YQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---S 241
Query: 214 YIWTHNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTV 264
Y W N E PN I DG G L I + +D G Y C+ S +
Sbjct: 242 YRWLLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM 289
Query: 265 GKISTKT 271
STK+
Sbjct: 290 -DFSTKS 295
>gi|410986311|ref|XP_003999454.1| PREDICTED: contactin-2 [Felis catus]
Length = 1045
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 235/484 (48%), Gaps = 17/484 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 344 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 395
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P++ A GG + I C P AAPK
Sbjct: 396 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVKRLIPAARGGEIVIPCQPRAAPKAVV 455
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 456 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 514
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + +L L+C A + +D+ +IWT + I + ++
Sbjct: 515 KITLAPSSADVNLGDSLTLQCHASHDPTMDLTFIWTLDDFPIDVDKPGGHYRRASVKETV 574
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V + T+ + W+
Sbjct: 575 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRNIGDTTVQLSWS 634
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 635 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 689
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 690 VLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 749
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES +
Sbjct: 750 GYLLSFRRQGSTSWQTARVPG-ADARHFVYSNDSVQPYTPFEVKIRSYNRRGDGPES-LT 807
Query: 481 TIWH 484
T+ H
Sbjct: 808 TLVH 811
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 167 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 220
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 221 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPQIKWR 279
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I V+ +D G Y C A N G D +GR+IV P + +
Sbjct: 280 K---VDGSLSPQWATAEPTLQIPSVAFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 336
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ + NL+ C+A + V W NG + + + + + G L
Sbjct: 337 VI-SDMEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 386
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 387 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 419
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG + L R+ + L I +D +YQC
Sbjct: 62 VTLACRARASPPATYRWKMNGTEMK-----LVPGSRHQLVGGNLVIMNPTKAQDAGVYQC 116
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 117 LASNPVGTIVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 174
Query: 124 -KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 175 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 232
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + P + + + L C A + + + +
Sbjct: 233 NLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPQIKW-----------RKV 281
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + +F D G YEC +++ G+ + + +IV+ P
Sbjct: 282 DGSLSPQWATAEPTLQIPSVAFEDEGTYECEAENSKGRDTVQGRIIVQAQP 332
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + ++ ++P AP+++ G +++++WEP+ +
Sbjct: 785 PYTPFEVKIRSYNRRGDG-PESLTTLVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 842
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 843 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVTDLHPNTKYHVTVRAYNRAG 900
Query: 473 PGPES 477
GP S
Sbjct: 901 TGPAS 905
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 85/215 (39%), Gaps = 39/215 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SSA+ T P F+ +PL E T VT+ C A+P + WK +G +
Sbjct: 30 WSSARGSPATFGPVFEDQPLGLLFPEESTEE----KVTLACRARASPPATYRWKMNGTEM 85
Query: 131 G-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQ 185
G R GNL+I +P D+G+Y C A+N G E+ R L S E+
Sbjct: 86 KLVPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTIVSREAVLRFGFLQEFSKEER 145
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG---- 240
P K L AH L +Y W N E PN I DG
Sbjct: 146 DPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFV 190
Query: 241 ----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 191 SQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 224
>gi|345307132|ref|XP_001507473.2| PREDICTED: contactin-2-like [Ornithorhynchus anatinus]
Length = 1377
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 231/483 (47%), Gaps = 28/483 (5%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL WTC A G P T W RNG+ PL Q R + L L + D
Sbjct: 586 DIGSDLRWTCAAAGKPRPTMRWLRNGD-------PLASQARLEVSGGELKFSKLALQ-DS 637
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ Y+SA+L V L P F+ P++ A GG V I C P +AP+
Sbjct: 638 GMYQCVAENKHGAIYASAELAVQALAPDFRLNPVKRLIPAARGGEVIIPCQPRSAPRAVV 697
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K ++ + R I +G L++ +SR D G Y+C A N G S G L V +
Sbjct: 698 LWSKGTELLTNSSRVTITLDGTLILRNLSRSDEGKYTCFAENFMGKANSTGTLSVRDA-T 756
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + NL L+C A + +D+ + WT + I + +
Sbjct: 757 KITLAPSSADVNLGENLTLQCHASHDPTMDLTFTWTLDDSPIDFDKPDGHYRRASAKEAI 816
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA AG+Y C+ ++ V + T+++ GPPG PGGV V ++ T+ + W+
Sbjct: 817 GDLTIVNAQLRHAGKYTCMAQTVVDSAAEAATLLIRGPPGPPGGVVVRDISDTTVQLSWS 876
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y I ART W V + E + T R + N L PW YEF+
Sbjct: 877 RGFDNHSPIAKYTIQARTLPAGQWKPVRTEPVNIEGNAETAR----VLN-LTPWMDYEFR 931
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 932 VVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIINWTPMLREYQNGDGF 991
Query: 421 YYKIFWRKKNDTE------FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
Y + +RK+ + FQ+E+L V R + YT +EVK++ N G G
Sbjct: 992 GYLLSFRKQGSVDWRTTRVFQAESLH-------YVYRNETIQPYTPFEVKIRGYNRKGEG 1044
Query: 475 PES 477
PES
Sbjct: 1045 PES 1047
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 14/192 (7%)
Query: 86 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
PS K R SETYA G VT+ C P P+ W++ + G+ + L
Sbjct: 484 FSPSIKAR-FPSETYALAGQQVTLECFAFGNPVPRIKWRR---VDGTLSPQWAEGEPTLQ 539
Query: 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 205
I+ V +D G Y C A N G D +GR+IV P + + + +L+ C+A
Sbjct: 540 IANVGFEDEGTYECEAENTKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSDLRWTCAAA 598
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ + W NG + + + + GG L+ + + D+G Y+CV ++ G
Sbjct: 599 GKPRPTMR--WLRNGDPLASQ-------ARLEVSGGELKFSKLALQDSGMYQCVAENKHG 649
Query: 266 KISTKTTVIVEG 277
I + V+
Sbjct: 650 AIYASAELAVQA 661
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 104/296 (35%), Gaps = 40/296 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG + LE RY + L I D YQC
Sbjct: 296 VTLACRARASPPATYRWKMNGTEMK-----LEPNSRYQLVGGNLVITNPVKAEDAGAYQC 350
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--------EAAPK 118
A N L T S F K + EG V + CNP E P
Sbjct: 351 LASNTLGTVVSREAFLRFGFLQEFSKEERDP-VRITEGWGVMLPCNPPAHYPGEKETFPI 409
Query: 119 PKFVWKKDGNIIGSG---GRRKIFE-NGNLLISPVSRDDSGIYSCTATN-----VHGMDE 169
F + G GR + + GNL I+ + D G YSC AT+ +
Sbjct: 410 LSFPFHSALXXXCGGFADGRHFVSQMTGNLYIARTNASDLGNYSCLATSHMDFTTKSVFS 469
Query: 170 SKGRLIVL------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
RL + PS + P + A + + L C A + RI
Sbjct: 470 KFARLNLAAEDPRQFSPSIKARFPSETYALAGQQVTLECFAFGNPV-----------PRI 518
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ +P L+I N F D G YEC ++T G+ + + +IV+ P
Sbjct: 519 KWRRVDGTLSPQWAEGEPTLQIANVGFEDEGTYECEAENTKGRDTVQGRIIVQAQP 574
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 180/499 (36%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C+ P W + ELL + R I D L +R L+ D Y C A+
Sbjct: 687 CQPRSAPRAVVLWSKGTELLT-------NSSRVTITLDGTLILRNLS-RSDEGKYTCFAE 738
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
N + S+ L V +TL PS L G N+T+ C+ P F
Sbjct: 739 NFMGKANSTGTLSVRDATKITLAPSSADVNL--------GENLTLQCHASHDPTMDLTFT 790
Query: 123 W----------KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA-TNVHGMDESK 171
W K DG+ + + I G+L I +G Y+C A T V E+
Sbjct: 791 WTLDDSPIDFDKPDGHYRRASAKEAI---GDLTIVNAQLRHAGKYTCMAQTVVDSAAEAA 847
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNE 230
LI + I+ +QL S + +A Y + G
Sbjct: 848 TLLIRGPPGPPGGVVVRDIS---DTTVQLSWSRGFDNHSPIAKYTIQARTLPAGQWKPVR 904
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGK-----ISTKTTVIVEGPPGLPGGV 285
E NI + + N + E+ V + +G S+K P P G+
Sbjct: 905 TEPVNIEGNAETARVLNLTPWMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGL 964
Query: 286 QVVEVHKTSATIQWT-------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
I WT +G G + ++ +W +T V E
Sbjct: 965 SGGGGAPGELIINWTPMLREYQNGDGFGY-LLSFRKQGSVDWRTT------RVFQAESLH 1017
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
Y R E + P++ +E K+ N G G P S + ++ ++P AP+++
Sbjct: 1018 YVYRNE-----TIQPYTPFEVKIRGYNRKGEG-PESLTAIVHSAEEEPRVAPAKVTAKAA 1071
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 458
++ ++WEP+ R N + Y+I + K D E ++ ++ G A R+
Sbjct: 1072 LASEVDVTWEPVTRGDTNGVLLGYEIRYWKDGDKEAAADRVRTAGLDTTA--RVTGLHPS 1129
Query: 459 TEYEVKVQAINDVGPGPES 477
T+Y + V+A N G GP S
Sbjct: 1130 TKYHITVRAYNRAGTGPAS 1148
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+S AQ T P F+ +P+ S + E VT+ C A+P + WK +G +
Sbjct: 264 WSPAQSSPGTYGPIFEDQPI-SALFPEESREEKVTLACRARASPPATYRWKMNGTEMKLE 322
Query: 133 GGRRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
R GNL+I+ PV +D+G Y C A+N G E+ R L S E+ P
Sbjct: 323 PNSRYQLVGGNLVITNPVKAEDAGAYQCLASNTLGTVVSREAFLRFGFLQEFSKEERDPV 382
Query: 189 KITIAAHRNLQLRCSAH---TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL-LE 244
+IT L AH +E + H+ + + + G L +
Sbjct: 383 RITEGWGVMLPCNPPAHYPGEKETFPILSFPFHSALXXXCGGFADGRHFVSQMTGNLYIA 442
Query: 245 ITNASFADAGEYECVVKS 262
TNAS D G Y C+ S
Sbjct: 443 RTNAS--DLGNYSCLATS 458
>gi|405964955|gb|EKC30393.1| Contactin [Crassostrea gigas]
Length = 1421
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 177/339 (52%), Gaps = 26/339 (7%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +++L W C+AFG+P TY+W+RNG+LL+ ++ I N LTI L E
Sbjct: 706 DRESELVWRCQAFGIPRPTYTWYRNGQLLSGDS-------NLIITGNTLTIPRLG-ESQA 757
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A N S+AQLRVL+ PSFKKRPLES T GG+ TI C+PEAAP+P
Sbjct: 758 GMYQCMASNSHGVVTSTAQLRVLSFPPSFKKRPLESTTIGSLGGSATILCHPEAAPRPNI 817
Query: 122 VWKKDGNII-------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W +G++I G+ + +G+L I +S D G+Y+C A N+HG +S L
Sbjct: 818 TWLYEGHVIPGDSEQDGTPAHLQSLTSGHLRIVNLSYTDQGLYTCKAVNIHGTVQSSTEL 877
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN--ELE 232
VL G + + P +T+ + L C A L++ Y W+ N I N ++
Sbjct: 878 TVL-GRTVMVERPSTVTVVMNGTALLSCRASYSPSLELVYTWSFNDQSIDPEQDNNFKMR 936
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
+P G L I F AG Y C + + + T T+ V GPPG P GV VV+
Sbjct: 937 SPFT----GDLYIVMTQFRHAGVYTCTASTQLDFVITSATLSVLGPPGEPFGVHVVKRQS 992
Query: 293 T----SATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 327
+ + W DG T+GRP+ Y I ++N++ + +N+
Sbjct: 993 SIDPYIIHLAWQDGVTHGRPVQAYSIFTKSNYSESKWNM 1031
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 112/279 (40%), Gaps = 20/279 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLP-LED---QDRYFIQDNVLTIRYLNPERD 60
D+ C A+G + Y WF LP L D + R+ D VLTI + + D
Sbjct: 617 VDVRLECFAYGSGPLVYQWF----------LPTLRDPGTRVRFTDSDRVLTIVGVTLQ-D 665
Query: 61 PAMYQCRAKNQLK-TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C ++ TR + KP F PL + +A + C P+P
Sbjct: 666 AGVYTCVCSSRRSGTRDQKTFHLAIEAKPVFTV-PLRDQ-HADRESELVWRCQAFGIPRP 723
Query: 120 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
+ W ++G ++ SG I L I + +G+Y C A+N HG+ S +L VL
Sbjct: 724 TYTWYRNGQLL-SGDSNLIITGNTLTIPRLGESQAGMYQCMASNSHGVVTSTAQLRVLSF 782
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINI 238
P +++ P + T H E W + G I G+ + + ++
Sbjct: 783 PPSFKKRPLESTTIGSLGGSATILCHPEAAPRPNITWLYEGHVIPGDSEQDGTPAHLQSL 842
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G L I N S+ D G Y C + G + + T + V G
Sbjct: 843 TSGHLRIVNLSYTDQGLYTCKAVNIHGTVQSSTELTVLG 881
>gi|403294842|ref|XP_003938372.1| PREDICTED: contactin-2 [Saimiri boliviensis boliviensis]
Length = 1040
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 232/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLVIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + ++
Sbjct: 510 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTSVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYACMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYILQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S Y +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYMPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENTKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC ++T G+ + + +IV+ P
Sbjct: 281 SPQWATAEPTLQIPSVSFEDEGTYECEAENTKGRDTVQGRIIVQAQP 327
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 85/216 (39%), Gaps = 33/216 (15%)
Query: 72 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNI 129
+ +SSA T P F+ +PL S + E V + C A+P + WK +G
Sbjct: 21 FSSAWSSALGSPATFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTE 79
Query: 130 IG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYE 184
+ G R GNL+I +P D+G+Y C A+N G E+ R L S E
Sbjct: 80 MKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEE 139
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--- 240
+ P K L AH L +Y W N E PN I DG
Sbjct: 140 RDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHF 184
Query: 241 -----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 185 VSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ +E K+ + N G G P S + + ++P AP+++ +++++WEP+ +
Sbjct: 780 PYMPFEVKIRSYNRRGDG-PESLTALVYSAEEEPKVAPTKVWAKAVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + + D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWRAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
>gi|345797925|ref|XP_003434377.1| PREDICTED: contactin-2 [Canis lupus familiaris]
Length = 1016
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 230/477 (48%), Gaps = 16/477 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q R + L L+ E D
Sbjct: 315 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLTSQSRVEVLAGDLRFSKLSLE-DS 366
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P++ A GG + I C P AAPK
Sbjct: 367 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVKRLIPAARGGEIAIPCQPRAAPKAVV 426
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 427 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 485
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I +L L+C A + +D+ +IWT + I + +
Sbjct: 486 KITLAPSSADINLGDSLTLQCHASHDPTMDLTFIWTLDDFPIDFDKPGGHYRRASAKETV 545
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V + T+ + W+
Sbjct: 546 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRNIGDTTVQLSWS 605
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 606 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 660
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L ++W P+PRE QN
Sbjct: 661 VVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELILNWTPVPREYQNGDGF 720
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 721 GYLLSFRRQGGSGWQTARVPG-ADAQHFVYSNDSVRPYTPFEVKIRSYNRRGDGPES 776
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 138 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 191
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 192 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPQIKWR 250
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I +S +D G Y C A N G D +GR+IV P + +
Sbjct: 251 K---VDGSLSPQWATAEPTLQIPSISFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 307
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ + NL+ C+A + V W NG + + + + G L
Sbjct: 308 VI-SDMEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLTSQS-------RVEVLAGDLR 357
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 358 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 390
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + ++ ++P AP+++ G +++++WEP+ +
Sbjct: 756 PYTPFEVKIRSYNRRGDG-PESLTALVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 813
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V ++A N G
Sbjct: 814 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVTGLHPDTKYHVTIRAYNRAG 871
Query: 473 PGPES 477
GP S
Sbjct: 872 TGPTS 876
>gi|268054015|gb|ACY92494.1| contactin-like protein [Saccoglossus kowalevskii]
Length = 564
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 187/341 (54%), Gaps = 20/341 (5%)
Query: 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--HGPSYYEQLPPKITIAAHRNLQLRCS 203
I V D G Y+C A N G D+S+GRL++ H + Q P ++I + L+C
Sbjct: 1 IQNVQDSDGGKYTCIARNYIGEDQSEGRLVIRDPHDGTVITQWPLAMSIEVGDDATLKCR 60
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A + +LD+ YIW +GV+I +D ++ + G LEI +A +G Y C +T
Sbjct: 61 ATADPVLDLTYIWLLDGVQIDVLD----DSHYARLRDGNLEIIDAELRQSGVYTCTAHTT 116
Query: 264 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
+ ++S VI++G PG P GV+ ++ S ++W++G +N PI Y + +RT
Sbjct: 117 IDEVSKSAEVIIKGAPGPPAGVRASDITTNSCQLRWSEGFSNNDPIKTYTVQSRTKEEPE 176
Query: 324 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 383
W ++R ++ N L PWS Y+F+V A N G GEPS PSP+Y+T
Sbjct: 177 WI----------IEREGIPDLSASLNSLSPWSNYQFRVSAVNSYGRGEPSLPSPEYSTHE 226
Query: 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 443
DKPY P +GGGGGK GDL I+W+PL R+ QNAP + Y ++W+K N E S+ +
Sbjct: 227 DKPYHEPRNVGGGGGKTGDLRITWDPLSRQDQNAPGLGYYVYWKKANSREEYSKGVVNDE 286
Query: 444 NVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
VG+ V+ +P+ Y +Y+V+V N G GP S + TI+
Sbjct: 287 AVGVYTVKGVPT---YVQYDVRVGVFNAKGDGPNSTISTIY 324
>gi|296230542|ref|XP_002760749.1| PREDICTED: contactin-2 [Callithrix jacchus]
Length = 1040
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 231/483 (47%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPAVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIVIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLVIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + ++
Sbjct: 510 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTSVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYACMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYILQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S Y +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYMPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + A W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKP--RPAVRWLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGT-----DMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKD 126
+ T S A LR L+ K+ +T+ EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWLLNEF 173
Query: 127 GNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 174 PNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAA 231
Query: 177 ----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L PS + P + + + L C A + RI ++
Sbjct: 232 EDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSL 280
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 281 SPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYMPFEVKIRSYNRRGDG-PESLTALVYSAEEEPKVAPTKVWAKGVSSSEMNVTWEPVQQ 838
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
E N + Y+I + + D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 839 E-MNGILLGYEIRYWRAGDKEAAADRVRTAGLDTSA--RVSGLHPSTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 81/203 (39%), Gaps = 33/203 (16%)
Query: 85 TLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFEN 141
T P F+ +PL S + E V + C A+P + WK +G ++ G R
Sbjct: 34 TFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTDMKLEPGSRHQLVG 92
Query: 142 GNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRN 197
GNL+I +P D+G+Y C A+N G E+ R L S E+ P K
Sbjct: 93 GNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVM 152
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--------GLLEITNA 248
L AH L +Y W N E PN I DG G L I
Sbjct: 153 LPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQTTGNLYIART 197
Query: 249 SFADAGEYECVVKSTVGKISTKT 271
+ +D G Y C+ S + STK+
Sbjct: 198 NASDLGNYSCLATSHM-DFSTKS 219
>gi|189242457|ref|XP_970217.2| PREDICTED: similar to AGAP000720-PA [Tribolium castaneum]
Length = 1259
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 226/468 (48%), Gaps = 28/468 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + CEA GVP W NG+ + SE P R +++N + I L E D Y C
Sbjct: 353 VEFRCEAGGVPKPEIKWIHNGKPI-SEAPP---NPRRRVENNRIVIERL-VESDTGNYGC 407
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL+L P + P ++T A +G NVT+ C APKP W +
Sbjct: 408 NATNSLGYVYKDVYVNVLSLAPEILEAP--TDTQAVDGQNVTMICKVLGAPKPSIKWSLN 465
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ +GGR + NG+L+I V DD G Y+C A N G +K L+V +Y
Sbjct: 466 EREL-TGGRYIVQPNGDLIIRNVQFDDRGNYTCFAENKFGNASAKAALLV-KSHTYITDG 523
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AAH + RC+A +++ LD+ IW N I DL E E + L IT
Sbjct: 524 PEDYEVAAHTSATFRCNAVSDDSLDLEIIWLKNDQPI---DLEE-EPRFVRSSDYSLTIT 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
D+G Y CV ++ + + S K +IV+ P P ++ VE H ATI+W N
Sbjct: 580 QTIELDSGTYTCVARTALDEASAKAQLIVQDVPN-PPSMEGVECHAKDATIRWKSMGDNR 638
Query: 307 RPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
PI+HY I T + TW +V ++ S + PW+ Y F+VIA N
Sbjct: 639 APISHYIIEYNTTFTPETWTAAYNNVPATDM---------SYNVPMSPWTNYTFRVIAVN 689
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G PS+ S T D PY+ P + G G + +L ISW P+P+ + NA Y+++
Sbjct: 690 KIGKSLPSTHSDVCTTEPDVPYKNPDDVKGEGDRPDNLIISWTPMPKIEHNADKFQYRVY 749
Query: 426 WRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
WR+ E ++S + ++ V P+ + +Y +KV A+N+ G
Sbjct: 750 WRRDIPGERYESRDITDWRVKQFVVDNQPT---FQQYRIKVVAMNEKG 794
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 18/220 (8%)
Query: 60 DPAMYQCRAKNQLKTRY---SSAQLRVLTL---KPSFKKRPL-----ESETYAGEGGNVT 108
D Y C A + K Y +S L V++ S K+ P+ T A G
Sbjct: 203 DNFKYACAATSPFKHEYKYGNSVLLNVVSTGVSAASNKREPVLQYVSRKNTVAYLGKQQK 262
Query: 109 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGM 167
++C P P+ VW KDG I S R G +L+I V+ +D G Y+C +N G
Sbjct: 263 LYCIFGGTPLPQTVWYKDGKPIQSSDRITQDNYGKSLVIRVVNFEDEGKYTCEVSNGVGE 322
Query: 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+S + + Y+ P + A ++ RC A ++ W HNG I
Sbjct: 323 AKSYSIDLKVFAIPYFIAEPERQNAAEGETVEFRCEAGGVPKPEIK--WIHNGKPISEAP 380
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P ++ + I +D G Y C +++G +
Sbjct: 381 PN----PRRRVENNRIVIERLVESDTGNYGCNATNSLGYV 416
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 111/284 (39%), Gaps = 40/284 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P Y W +NG+ + +T DR Q T+ P + D YQC A+
Sbjct: 57 CEAIGEPAPKYRWVKNGKPFHWQTY----DDRISQQQGRGTLSISKPTDVDLGQYQCFAE 112
Query: 70 NQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW---- 123
N+ S++ SFK +P+ GE +T C P+ PKP W
Sbjct: 113 NEHGVATSNSVFMRKAELNSFKTTQPISLSGDEGEPFKLT--CEPPDGWPKPIVHWIYLY 170
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRD---DSGIYSCTATNVHGMDESKGRLIVLHGP 180
G + R I GNL S ++RD D+ Y+C AT+ + G ++L+
Sbjct: 171 TNGGFKTINSSRMTIDPEGNLWFSNLTRDDVTDNFKYACAATSPFKHEYKYGNSVLLNVV 230
Query: 181 S-----YYEQLPPKITIAAHRNL--------QLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
S + P + + +N +L C L +W +G I + D
Sbjct: 231 STGVSAASNKREPVLQYVSRKNTVAYLGKQQKLYCIFGGTPLPQT--VWYKDGKPIQSSD 288
Query: 228 LNELETPNINID--GGLLEITNASFADAGEYECVVKSTVGKIST 269
I D G L I +F D G+Y C V + VG+ +
Sbjct: 289 -------RITQDNYGKSLVIRVVNFEDEGKYTCEVSNGVGEAKS 325
>gi|270016380|gb|EFA12826.1| neuroglian [Tribolium castaneum]
Length = 1267
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 226/468 (48%), Gaps = 28/468 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + CEA GVP W NG+ + SE P R +++N + I L E D Y C
Sbjct: 353 VEFRCEAGGVPKPEIKWIHNGKPI-SEAPP---NPRRRVENNRIVIERL-VESDTGNYGC 407
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL+L P + P ++T A +G NVT+ C APKP W +
Sbjct: 408 NATNSLGYVYKDVYVNVLSLAPEILEAP--TDTQAVDGQNVTMICKVLGAPKPSIKWSLN 465
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ +GGR + NG+L+I V DD G Y+C A N G +K L+V +Y
Sbjct: 466 EREL-TGGRYIVQPNGDLIIRNVQFDDRGNYTCFAENKFGNASAKAALLV-KSHTYITDG 523
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AAH + RC+A +++ LD+ IW N I DL E E + L IT
Sbjct: 524 PEDYEVAAHTSATFRCNAVSDDSLDLEIIWLKNDQPI---DLEE-EPRFVRSSDYSLTIT 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
D+G Y CV ++ + + S K +IV+ P P ++ VE H ATI+W N
Sbjct: 580 QTIELDSGTYTCVARTALDEASAKAQLIVQDVPN-PPSMEGVECHAKDATIRWKSMGDNR 638
Query: 307 RPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
PI+HY I T + TW +V ++ S + PW+ Y F+VIA N
Sbjct: 639 APISHYIIEYNTTFTPETWTAAYNNVPATDM---------SYNVPMSPWTNYTFRVIAVN 689
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G PS+ S T D PY+ P + G G + +L ISW P+P+ + NA Y+++
Sbjct: 690 KIGKSLPSTHSDVCTTEPDVPYKNPDDVKGEGDRPDNLIISWTPMPKIEHNADKFQYRVY 749
Query: 426 WRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
WR+ E ++S + ++ V P+ + +Y +KV A+N+ G
Sbjct: 750 WRRDIPGERYESRDITDWRVKQFVVDNQPT---FQQYRIKVVAMNEKG 794
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 18/220 (8%)
Query: 60 DPAMYQCRAKNQLKTRY---SSAQLRVLTL---KPSFKKRPL-----ESETYAGEGGNVT 108
D Y C A + K Y +S L V++ S K+ P+ T A G
Sbjct: 203 DNFKYACAATSPFKHEYKYGNSVLLNVVSTGVSAASNKREPVLQYVSRKNTVAYLGKQQK 262
Query: 109 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGM 167
++C P P+ VW KDG I S R G +L+I V+ +D G Y+C +N G
Sbjct: 263 LYCIFGGTPLPQTVWYKDGKPIQSSDRITQDNYGKSLVIRVVNFEDEGKYTCEVSNGVGE 322
Query: 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+S + + Y+ P + A ++ RC A ++ W HNG I
Sbjct: 323 AKSYSIDLKVFAIPYFIAEPERQNAAEGETVEFRCEAGGVPKPEIK--WIHNGKPISEAP 380
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P ++ + I +D G Y C +++G +
Sbjct: 381 PN----PRRRVENNRIVIERLVESDTGNYGCNATNSLGYV 416
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 111/284 (39%), Gaps = 40/284 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P Y W +NG+ + +T DR Q T+ P + D YQC A+
Sbjct: 57 CEAIGEPAPKYRWVKNGKPFHWQTY----DDRISQQQGRGTLSISKPTDVDLGQYQCFAE 112
Query: 70 NQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW---- 123
N+ S++ SFK +P+ GE +T C P+ PKP W
Sbjct: 113 NEHGVATSNSVFMRKAELNSFKTTQPISLSGDEGEPFKLT--CEPPDGWPKPIVHWIYLY 170
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRD---DSGIYSCTATNVHGMDESKGRLIVLHGP 180
G + R I GNL S ++RD D+ Y+C AT+ + G ++L+
Sbjct: 171 TNGGFKTINSSRMTIDPEGNLWFSNLTRDDVTDNFKYACAATSPFKHEYKYGNSVLLNVV 230
Query: 181 S-----YYEQLPPKITIAAHRNL--------QLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
S + P + + +N +L C L +W +G I + D
Sbjct: 231 STGVSAASNKREPVLQYVSRKNTVAYLGKQQKLYCIFGGTPLPQT--VWYKDGKPIQSSD 288
Query: 228 LNELETPNINID--GGLLEITNASFADAGEYECVVKSTVGKIST 269
I D G L I +F D G+Y C V + VG+ +
Sbjct: 289 -------RITQDNYGKSLVIRVVNFEDEGKYTCEVSNGVGEAKS 325
>gi|402859558|ref|XP_003894221.1| PREDICTED: contactin-4-like, partial [Papio anubis]
Length = 622
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 197/397 (49%), Gaps = 9/397 (2%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147
P F + L+ T GG V I C P+A+PKP + WKK +I+ R + E+GNL I
Sbjct: 3 PDFSRTLLKRITLVKVGGEVVIECKPKASPKPVYTWKKGRDILKENERITVSEDGNLRII 62
Query: 148 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 207
V++ D+G Y+C ATN G S G L+V P+ P + + ++ L C +
Sbjct: 63 NVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHD 121
Query: 208 ELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
LD+ + W+ NG I + D + E + G L+ I N AG+Y C+V+++V +
Sbjct: 122 HSLDIVFTWSFNGHLIDFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDR 180
Query: 267 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 326
+S +IV GPPG P V + E+ T+A + W G N PIT Y I ART ++ W
Sbjct: 181 LSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQA 240
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
V + + + +D G+ + L PW YEF+ +A N +G GEPS PS + T P
Sbjct: 241 V--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALP 295
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 446
P+ + GGGG +L I+WE +P E QN Y + +R + L +
Sbjct: 296 EVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADAS 354
Query: 447 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
V R S ++ +EVKV N+ G GP S ++
Sbjct: 355 RYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVY 391
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 171/489 (34%), Gaps = 41/489 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R + ++ +R +N + D Y C A
Sbjct: 26 CKPKASPKPVYTWKKGRDIL-------KENERITVSED-GNLRIINVTKSDAGSYTCIAT 77
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 78 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 136
Query: 130 IGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
I FE G+L+I + +G Y C + LIV P
Sbjct: 137 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 196
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + L R + + I +G +N + P + IDG
Sbjct: 197 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PEL-IDGKTF 253
Query: 244 EITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
T EYE V + +G + S K P P V K+
Sbjct: 254 TATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELV 313
Query: 297 IQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
I W + NGR Y + R W + + RY R E+ + P
Sbjct: 314 ITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VRP 365
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S +E KV N G G P SP+ + ++P + P+ I D+ + W P E
Sbjct: 366 FSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PLE 423
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
K Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 424 KNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSALYHLAVKAYNSAGT 481
Query: 474 GPESEVVTI 482
GP S V +
Sbjct: 482 GPSSATVNV 490
>gi|62413634|ref|NP_001014814.1| contactin-1 precursor [Danio rerio]
gi|34419873|gb|AAQ67360.1| recognition molecule F3-b [Danio rerio]
Length = 1031
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 226/490 (46%), Gaps = 36/490 (7%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++LT C A G P W ++G Y L L E D
Sbjct: 347 DVGSELTLRCVAVGKPIPWIRWLKDG---------------YSYGKGELKFSSLTFE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y++A+LRV++ P+F P++ E G V I CNP AAPKP+F
Sbjct: 391 GMYQCIAENEWGTIYANAELRVVSCAPTFIYNPVKKILLGAENGRVVIECNPRAAPKPRF 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH--- 178
+WK+ ++ + R I+++G+L I ++ D G Y+C A N G S G L +
Sbjct: 451 IWKRGSELLSNSSRIFIWDDGSLEILNATKSDEGSYTCYAENDRGKSNSTGTLTITEATK 510
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETP 234
GPS E A + L+CSA + LDV +IWT + I D E
Sbjct: 511 ITVGPSNSEA-------AVGDTIVLQCSASYDPSLDVTFIWTVDSYSINFYTDFEHYELD 563
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+ + G L I N AG Y C ++ V + + V V G PG PGGV+V E+ TS
Sbjct: 564 MDHENSGDLLIKNIQIRHAGHYICTAQTIVDNATAEADVFVRGLPGPPGGVRVEEIGDTS 623
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVP 353
I+W G+ +G P+ + + R + + + + G E++ L P
Sbjct: 624 VKIRWCLGSDHGSPLIQHIVQTRDFYA---LDPEDWKTATTTPAFLNGSTESATVVDLYP 680
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
W YEF+V A NE G GE S PS + T +P APS + G G G+L ++W P+ +
Sbjct: 681 WMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIGQVGISGELIVTWNPVKPQ 740
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
Y + +++ D E++ T+++ V S TE ++KV N+ G
Sbjct: 741 FFFGKKFGYVVAFKQHEDYEWKWSTVEDPETR--RYVYKESMTPDTEIQIKVSTFNNKGE 798
Query: 474 GPESEVVTIW 483
GP S + ++
Sbjct: 799 GPASLISVVY 808
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 144/372 (38%), Gaps = 66/372 (17%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF--IQDNVLTIRYLNPERD--PA 62
++ C P W+ N N + +E D +F + N++ NPE++
Sbjct: 62 ISMNCRVRANPPAIIKWWLN----NWQIKLMEQPDEHFSLVGGNLVIT---NPEKNKHAG 114
Query: 63 MYQCRAKN---QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y C AKN + ++ ++ + L P+ ++ P+ + EG + C P +
Sbjct: 115 KYVCVAKNVYGTVMSKEANVKFGYLNQFPTDEREPVNVK----EGQGAVLLCTPPSRYPD 170
Query: 120 ----KFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATN------VHGMD 168
++++ N I RR + ++ GNL I+ V D G YSC ++ V M
Sbjct: 171 EVMFRWIYNDFPNFIIPDQRRFVSQSTGNLYIAKVEPSDVGNYSCFVSSPTIGKSVFSMP 230
Query: 169 ESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ I V P+ PK H+N+ L C A L + R
Sbjct: 231 IALIPQIEKEVKRYPADIRVKFPKTYALVHQNITLECFALGNPLPHI---------RWRK 281
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP------ 279
+D + ++++G LL + N + D G YEC + G + + VEGPP
Sbjct: 282 LDADLPPNYEVSMNGALLHLINVQYEDEGSYECETLNVKGMDWYRQWLYVEGPPEWAEHI 341
Query: 280 -------GLPGGVQVVEVHKTSATIQW-TDGATNGR------PITH-----YKIIARTNW 320
G ++ V V K I+W DG + G+ +T Y+ IA W
Sbjct: 342 NDTEKDVGSELTLRCVAVGKPIPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENEW 401
Query: 321 NSTWFNVSEHVI 332
+ + N V+
Sbjct: 402 GTIYANAELRVV 413
>gi|426370197|ref|XP_004052056.1| PREDICTED: contactin-5-like, partial [Gorilla gorilla gorilla]
Length = 783
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 187/385 (48%), Gaps = 21/385 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 395 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 446
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 447 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDREVVIECKPQGSPKPT 506
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 507 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 565
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 566 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 622
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 623 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 682
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 683 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 737
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNT 381
YEF+V+A N +G G+PS+PS T
Sbjct: 738 YEFRVVATNPIGTGDPSTPSRMIRT 762
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 109/282 (38%), Gaps = 29/282 (10%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 109 DEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDSG 163
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKF 121
YQC A N L + S +F R S EG V + C+P +P+ +
Sbjct: 164 HYQCLATNTLGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEIIY 222
Query: 122 VW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRL 174
W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 223 SWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLT 282
Query: 175 IVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ G P P +T A +++ C A + + ++ NG L
Sbjct: 283 LRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKARL 341
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ + +LEI N DAG YEC +++ GK S +
Sbjct: 342 RKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 375
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 103/272 (37%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 218 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 273
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 274 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 333
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 334 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 391
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + + + G+L I N
Sbjct: 392 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQS-------RVEMVNGVLMIHNV 442
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 443 NQSDAGMYQCLAENKYGAIYASAELKILASAP 474
>gi|432114566|gb|ELK36414.1| Contactin-1 [Myotis davidii]
Length = 1034
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 232/487 (47%), Gaps = 55/487 (11%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNS-ETLPLEDQDRYFIQDNVLTIRYLNPER 59
+D +DL W C A G P T W +NG + + L D F
Sbjct: 249 VDIGSDLYWPCVATGKPIPTIRWLKNGYVYHQYHKGELRLYDVTF--------------E 294
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+ MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKP
Sbjct: 295 NAGMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKP 354
Query: 120 KFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
KF W K + +G GR LLI +SR Y+ T R+I+
Sbjct: 355 KFSWSKGTEWLVNGSSPGRV------TLLIRAMSR-----YTKDPT----------RIIL 393
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P + N ++C+A + LD+ ++W+ NG I N N
Sbjct: 394 A---------PLNADVTVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYRRNF 444
Query: 237 NIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
+D G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS
Sbjct: 445 MLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSV 504
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ W+ G+ N PI+ Y I +T + W + + G EA+ L+PW
Sbjct: 505 ALTWSRGSDNHSPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMEAARAVDLIPWM 559
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
YEF+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE
Sbjct: 560 EYEFRVVATNTLGIGEPSIPSNKIRTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYH 619
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N Y + ++ + E++ T+ ++G V + + +T ++VKV+A N+ G GP
Sbjct: 620 YGNNFGYVVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMRPFTAFQVKVKAFNNKGDGP 678
Query: 476 ESEVVTI 482
S + I
Sbjct: 679 YSLIAVI 685
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 101/270 (37%), Gaps = 44/270 (16%)
Query: 13 AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQ 71
+FG D++Y W LLN + + R F+ + N E D Y C +
Sbjct: 70 SFGY-DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSP 123
Query: 72 LKTRYSSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWK 124
T+ ++ L P +P ++ YA G NVT+ C P P W+
Sbjct: 124 SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWR 183
Query: 125 K-------DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
K I SG KIF + +D G Y C A N+ G D +GR+ V
Sbjct: 184 KVLEPMPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENIKGKDRHQGRIYVQ 235
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P + E + + +L C A + + + W NG E
Sbjct: 236 AFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYVYHQYHKGE------- 285
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 286 -----LRLYDVTFENAGMYQCIAENTYGAI 310
>gi|1430860|emb|CAA67504.1| brain-derived immunoglobulin superfamily molecule [Mus musculus]
Length = 705
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 183/374 (48%), Gaps = 15/374 (4%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+ G TY W +NG+ PL +DR I+ LTI N + D M Q
Sbjct: 335 WECKGNGRAKPTYRWVKNGD-------PLLTRDRIQIEQGTLTITKGNLQ-DAGMSQRVG 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 387 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +V+ P+ P
Sbjct: 447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W + D G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNT 381
G GEPS PS + T
Sbjct: 681 GIGEPSRPSEKRRT 694
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+L P++ Q+ I +A ++ C + Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKGNGRA--KPTYRWVKN 352
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + DAG + V ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLTITKGNLQDAGMSQRVGENKHGVIFSSAELSVIAES 405
Query: 278 P 278
P
Sbjct: 406 P 406
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 126/319 (39%), Gaps = 34/319 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + D L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATN--VHGMDESKGRLIVLHGPSYYE 184
RR + E GNL I+ V + D G Y+C TN H ++L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNSVTHPKVLGPPTPLILRNDGVMG 221
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I
Sbjct: 222 EYDPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKAR 272
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTS 294
+ G+LEI N DAG YECV +++ GK K + P VQ++ ++H
Sbjct: 273 RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAM 329
Query: 295 ATIQWTDGATNGRPITHYK 313
+ + NGR Y+
Sbjct: 330 EESVFWECKGNGRAKPTYR 348
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + +
Sbjct: 27 VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV ++V T V GPP
Sbjct: 187 SDVGNYTCVVTNSV------THPKVLGPP 209
>gi|410918977|ref|XP_003972961.1| PREDICTED: contactin-1a-like [Takifugu rubripes]
Length = 1040
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 218/484 (45%), Gaps = 33/484 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P W+++G + L LT D MYQC A+N
Sbjct: 353 CVAMGKPFPFIRWYKDGYMYGKGELKFSS----------LTFT------DSGMYQCIAEN 396
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+Y++A+LRV+ P+F+ P++ + G V I C P AAP+P+F W K ++
Sbjct: 397 SWGIKYANAELRVIACAPTFEFNPVKKQLLGARDGRVVIECKPRAAPRPQFRWMKGKELL 456
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+ R I +G+L I +++D G+Y+C A N G S G L + S P
Sbjct: 457 FNNSRISILFDGSLEIRDATKNDEGVYTCFAENSRGKANSSGYLTITEATS-ITVAPEDS 515
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL--LEITNA 248
+ + LRC+A + +LD+ +IW + R+ + D + D G L I NA
Sbjct: 516 QVKVGEEVVLRCAASFDPMLDITFIWAID-FRVIDFDSEWQHYERLWRDDGSGDLRIKNA 574
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
G Y C ++ V + V G PG PG ++V E+ T ++WT GA + P
Sbjct: 575 QIWHEGRYTCTAQTVVDSDVAYADLKVVGMPGPPGVIRVEEIGNTGVKLRWTKGADHNSP 634
Query: 309 ITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
I +Y I R W W N S + G E + + PW Y+F++IA N
Sbjct: 635 ILYYTIQTRHYWALNEDDWRNASTSPAFLD-----GNVERAEVTDIYPWLEYQFRIIATN 689
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
E G GE S PS + T P +P+ + G GG+ G++ I+W P+ + Y +
Sbjct: 690 EHGSGEASIPSLKIKTWDAAPVVSPTNVAGYGGRNGEIVITWTPVEPWHFYGKSFGYIVA 749
Query: 426 WRKKNDTEFQSETL-----KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ N ++ ET+ + Y + + +F E++VK+++ N G GP S
Sbjct: 750 FKPHNAYDWWFETISDPETRRYVHRDSYFIPTEEDFQVREFQVKIKSFNVKGDGPYSLTQ 809
Query: 481 TIWH 484
I++
Sbjct: 810 VIYY 813
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 141/367 (38%), Gaps = 53/367 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF-IQDNVLTIRYLNPERDPA-MY 64
++ C A P +Y W R N E +E D ++ + L I NP++ A +Y
Sbjct: 58 ISMNCRARANPPASYRWRRG----NWEIKLMEQPDEHYSLVGGNLVIN--NPKKKHAGVY 111
Query: 65 QCRAKNQLKTRYSS-AQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
C A+N T S AQ + L+ P ++ P+ + EG + C P A +
Sbjct: 112 ICVARNIYGTVISKEAQFKFGYLEEFPQEERDPV----HVKEGQGAVLLCAPPNAWPEEV 167
Query: 122 VWKKDGN---IIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGR 173
++ N + + RR+ + GNL IS V D+G YSC ++ +
Sbjct: 168 TYRWIFNEFPVFLNTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPMIGRSVFSKFIS 227
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
LI L + P I + + S T E + H R +D +L
Sbjct: 228 LIPLVPEEGERKYPADIRVKFQDTTAMLASNITLECFALGNPIPHIVWR--KVDATDL-P 284
Query: 234 PN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP------------ 279
PN I+ G +L + N + D G YEC +T GK K V VE P
Sbjct: 285 PNHEISESGAMLHLYNVQYDDVGGYECEAINTKGKDWHKAWVYVESAPEWAETINNTQID 344
Query: 280 -GLPGGVQVVEVHKTSATIQW-TDGATNGR------PITH-----YKIIARTNWNSTWFN 326
G ++ V + K I+W DG G+ +T Y+ IA +W + N
Sbjct: 345 IGSAHSMRCVAMGKPFPFIRWYKDGYMYGKGELKFSSLTFTDSGMYQCIAENSWGIKYAN 404
Query: 327 VSEHVIG 333
VI
Sbjct: 405 AELRVIA 411
>gi|41323984|gb|AAS00058.1| contactin [Carassius auratus]
Length = 1029
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/486 (30%), Positives = 223/486 (45%), Gaps = 28/486 (5%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++LT C A G P W ++G Y L L E D
Sbjct: 345 DVGSELTLRCVAVGKPLPWIRWLKDG---------------YSYGKGELKFSSLTFE-DS 388
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+LRV++ P+F P++ E G V I C P AAPKPKF
Sbjct: 389 GMYQCVAENEWGTIYASAELRVVSCAPTFIYNPVKKVLLGAEKGRVVIECKPRAAPKPKF 448
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+WK+ ++ + R I+++G+L I VS+ D G Y+C A N G S G L + +
Sbjct: 449 IWKRGSELLTNSSRMLIWDDGSLEILNVSKSDEGSYTCYAENDRGKSNSTGTLTITEA-T 507
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P L+CSA + LD+ +IWT + I D E + +
Sbjct: 508 KITVAPSDTEAVVGDTAILQCSASFDPSLDITFIWTVDSYVINFYTDFEHYELLMGHENR 567
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG Y C ++ V + + V V G PG PGGV+V E+ TS ++W+
Sbjct: 568 GDLLIKNIQVRHAGHYSCTAQTIVDNATAEADVSVRGLPGPPGGVRVEEIGDTSVKLRWS 627
Query: 301 DGATNGRPITHYKIIARTNWN---STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
G+ +G + + + R + W S + + G E++ L PW Y
Sbjct: 628 LGSDHGSSLIQHVVQTRDFYALDPEDWKTASTSPVFLD-----GSAESATVLDLYPWMQY 682
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
EF+V A NE G GE S PS + T +P APS + G G G+L ++W P+ +
Sbjct: 683 EFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIGQVGISGELIVTWTPVKPQFFFG 742
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y + +++ D E++ T+++ + S TE +VKV N+ G GP S
Sbjct: 743 KKFGYTVAFKQHEDYEWKWSTVEDPETR--RYIYKESMTPDTEIQVKVSTYNNKGEGPSS 800
Query: 478 EVVTIW 483
+ ++
Sbjct: 801 LISVVY 806
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSG 155
+TYA N+T+ C P P W+K D ++ + ++ NG LL + V +D G
Sbjct: 252 KTYALVHQNITLECFALGNPLPHIRWRKLDADLPPN---YEVSMNGALLHLINVQYEDEG 308
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y C NV GMD + L V P + E + L LRC A + L +
Sbjct: 309 SYECETLNVKGMDWYRQWLYVEGAPEWAEHI-NDTEKDVGSELTLRCVAVGKPLPWIR-- 365
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
W +G G G L+ ++ +F D+G Y+CV ++ G I
Sbjct: 366 WLKDGYSYGK---------------GELKFSSLTFEDSGMYQCVAENEWGTI 402
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 26/194 (13%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENG 142
P F++ PL++ YA + +++ C A P W + ++ G
Sbjct: 40 PIFEEEPLDT-VYAEDSPENKISMNCRARANPPALIKWWLNNWEIKLMEQPDEHFSLVGG 98
Query: 143 NLLIS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRN 197
NL+I+ P +G Y C A NV+G SK + Y Q P + + +
Sbjct: 99 NLVITNPDKGKHAGKYVCVAKNVYGTVISKEATVKF---GYLNQFPTDEREPVHVKEGQG 155
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN----INIDGGLLEITNASFADA 253
L CS + +V + W +N D P+ ++ G + I +D
Sbjct: 156 AVLLCSPPSRYPSEVLFRWIYN-------DFPNFIIPDQRRFVSQTTGNMYIAKVEASDV 208
Query: 254 GEYECVVKS-TVGK 266
G Y C V S T+GK
Sbjct: 209 GNYSCFVSSPTIGK 222
>gi|405969232|gb|EKC34215.1| Contactin [Crassostrea gigas]
Length = 820
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/519 (30%), Positives = 241/519 (46%), Gaps = 49/519 (9%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D AD+TW C A+G P YSW++NG LL P D I N LT+R N ++
Sbjct: 61 LDEGADVTWRCLAYGKPTPVYSWYKNGVLLQ----PTADSG-ITINRNTLTLRNANKQKH 115
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A N + S+AQ+RVL+ KP+F K PL A G V I C PE APKP+
Sbjct: 116 EGMYQCAATNVHGSSLSAAQIRVLSFKPTFAKYPLPESIDAALNGEVVIPCEPEGAPKPE 175
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K+ + S R +I N L I+ ++ D G Y C A NV G D S RL V
Sbjct: 176 ITWLKNNVQVNSDSRVQIMPNNFLKITQINYGDQGYYECRAKNVLGSDGSFCRLNVKVAT 235
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN-ELETPNINID 239
+ P+ + ++ + CSA + LD+ Y+WT +G +I ++ N E N+
Sbjct: 236 TITRAPNPETPVYQNKTALIYCSASYDLSLDLVYVWTFSG-KILDLQRNGHYELANLPSG 294
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ- 298
GL I A F G YEC+ ++ + + + +IV GPPG G+ T+ +I
Sbjct: 295 KGLY-IKMAQFYHEGTYECIARTPLNEARAQGRLIVYGPPGEVAGLYADPGTPTTNSIDI 353
Query: 299 -WTDGATNGRPITHYKIIA-----------RTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ GA++ R Y I+ +N T F S + G D T
Sbjct: 354 FFFLGASH-RSTIEYLIVEFEIQSEKGKWYFSNETHTVFAPSTVIPGNNRDMRTITVRG- 411
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG--GGKIGDLS 404
L P + Y F++ A N LG G P +PS NT P P+ + G ++G L
Sbjct: 412 ----LDPGNGYSFRIKAVNALGVGPPCTPSGTVNTLEAPPAAPPANLSSRTEGVEVGQLM 467
Query: 405 ISWEPLPREK---QNAPNIYYKIFWRKKN-----DTEFQSETLKEYGNVGI--------- 447
++W+ LP+ Q ++ Y +++R+ D + +++ NV +
Sbjct: 468 LTWKKLPKRYHGVQLESDVSYIVYYRQLKVSAAPDALWNMASIQTLRNVVVVHEVITDWE 527
Query: 448 ---AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
V+++ +F++TE+E K+Q N G S +V ++
Sbjct: 528 QEEVVIQVGEDFFWTEFETKIQTKNPHGRSHNSSIVVVY 566
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP-- 411
W+ +E K+ N G SS Y+ P P+ I G G L++ WEP+P
Sbjct: 541 WTEFETKIQTKNPHGRSHNSSIVVVYSA-MGMPVAVPTNIWGEGYNSTALTVHWEPVPDT 599
Query: 412 ----REKQNAPNIYYKIFWRKKNDT-EFQS-ETLKEYG--NVGIAVVRIPSEFYYTEYEV 463
+ K + Y + + ++DT +F+ + ++ +G N G+ + P +YY V
Sbjct: 600 RNEIKGKLGGYQVLYYLRTQDEDDTKDFKHRQAIRFHGQRNSGVVIGLSPDTYYY----V 655
Query: 464 KVQAINDVGPGPESE 478
+VQ D G GP E
Sbjct: 656 QVQVFTDAGLGPLGE 670
>gi|301765666|ref|XP_002918250.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Ailuropoda
melanoleuca]
Length = 1040
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 228/483 (47%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q R + L L+ E D
Sbjct: 339 DIGSNLGWGCAAAGKPRPTVRWLRNGE-------PLASQPRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P++ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVKRLIPAARGGEIAIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + G L+I +SR D G Y+C A N G S G L V +
Sbjct: 451 LWSKGTEILVNSSRVTVTPGGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I +L L+C A + +D+ +IWT + I + +
Sbjct: 510 KITLAPSSADINLGDSLTLQCHASHDPTMDLTFIWTLDDFPIDFDKPGGHYRRASAKETV 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V + T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRNIGDTTVQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTVPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ + +Q+ + + V S YT +EVK++ N GPES
Sbjct: 745 GYVLSFRRQGSSGWQTARVPG-ADAQHFVYSNDSVRPYTPFEVKIRGYNRRXDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPQIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRVIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ + NL C+A + V W NG + + P + + G L
Sbjct: 332 VI-SDMEADIGSNLGWGCAAAGKPRPTVR--WLRNGEPLASQ-------PRVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 116/291 (39%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG + LE R+ + L I +D +YQC
Sbjct: 57 VTLACRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQC 111
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ T+ EG V + CNP A P + W
Sbjct: 112 LASNPVGTVVSREAVLRFGFLQEFSKEERDPVRTH--EGWGVMLPCNPPAHYPGLSYRWL 169
Query: 124 -KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 170 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 227
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + P + + + L C A + + + +
Sbjct: 228 NLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPQIKW-----------RKV 276
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + VIV+ P
Sbjct: 277 DGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRVIVQAQP 327
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 84/214 (39%), Gaps = 39/214 (18%)
Query: 77 SSAQLRVLTLKPSFKKRPL-----ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 131
SSA+ T P F+ +PL E T VT+ C A+P + WK +G +
Sbjct: 26 SSARGSPATFGPVFEDQPLGLLFPEESTEE----KVTLACRARASPPATYRWKMNGTEMK 81
Query: 132 -SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQL 186
G R GNL+I +P D+G+Y C A+N G E+ R L S E+
Sbjct: 82 LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERD 141
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG----- 240
P + L AH L +Y W N E PN I DG
Sbjct: 142 PVRTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVS 186
Query: 241 ---GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 187 QTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ N G P S + + ++P AP+++ G +++++WEP +
Sbjct: 780 PYTPFEVKIRGYNRRXDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEP-GQ 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + + D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDTNGILLGYEIRYWRAGDKEAAADRVRTAGLDTRA--RVTGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
>gi|260791166|ref|XP_002590611.1| hypothetical protein BRAFLDRAFT_123608 [Branchiostoma floridae]
gi|229275806|gb|EEN46622.1| hypothetical protein BRAFLDRAFT_123608 [Branchiostoma floridae]
Length = 2280
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 218/483 (45%), Gaps = 29/483 (6%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN----VLTIRYLNPERDPAMY 64
W G V+Y+W NG++LN R + + L+I L E D +Y
Sbjct: 885 WEVRTDGDYTVSYTWLHNGQVLNG-------GGRVALASSGSTASLSISGLRAE-DSGVY 936
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A NQ S+A+LR PSF R L E A GG V P P WK
Sbjct: 937 QCVAFNQWGRANSAAELRAQDEPPSFGLR-LLPEIIASAGGTVVFNMRRRGVPVPTVTWK 995
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K+G + GGR + + G+L I+ V D G+Y+C TN G S L V G S
Sbjct: 996 KNGANVQLGGRYSMLDGGSLRITGVQLSDGGMYTCQLTNRMGAATSTATLTVQDGSSRSS 1055
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P ++T+ ++ L CS DV W HNG R+ DL+ + G L+
Sbjct: 1056 GNPSRVTVDYQQDGTLPCSTGGSSSSDVIKTWFHNGHRV---DLSSDHY--VKDSDGSLK 1110
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I + G Y C V++ G + + V P P V+ +V + + WT G+
Sbjct: 1111 ILQTTKVMEGTYVCSVETRTGSREQRAVLTVRASPDAPLHVRASDVSSRTGRVAWTAGSD 1170
Query: 305 NGRPITHYKIIARTNWNSTWFNV---SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
N P+T Y + RT + +W + S V+ + R + ++ +L P + YEF+V
Sbjct: 1171 NHSPVTGYIVQGRTQTDRSWTTLESGSAEVLADD------RMQTTVSELL-PGNDYEFRV 1223
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+ N +G GEPS PSP Y+T +D P +GGGGG IGDL I W L + + P
Sbjct: 1224 LGMNAIGLGEPSLPSPIYSTHSDAPVAKVGGVGGGGGDIGDLVIRWNALAEKYRGGPGFG 1283
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
YKIF++K T+ S N+ V P + +E KVQA N G GP S+
Sbjct: 1284 YKIFFKKLGSTDDFSVVQVTDPNMDHYVHSPDPPLGVFVAHEAKVQAFNQYGTGPMSDRA 1343
Query: 481 TIW 483
++
Sbjct: 1344 VVF 1346
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 127/308 (41%), Gaps = 38/308 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C+ G+P Y W +NG+ LN L D+ I N L I +RD +Y+C
Sbjct: 584 VTLNCKGEGIPAPQYRWRKNGQELNV----LSDERLTLIGGN-LVIDNPQKDRDAGLYEC 638
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG----EGGNVTIFCNP-EAAPKPKF 121
A N L S R L +F +R ++ G EG + C+P E P F
Sbjct: 639 LAFNDLGIVVS----RPSNLTFAFVER-FSTDARPGMTVLEGHGARLVCDPPEGHPGLVF 693
Query: 122 VWKKDG--NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSC---TATNVHGMDES--KGR 173
W K + + R + E +G+L + V D+G Y C ++T+ + E +GR
Sbjct: 694 HWVKTQFPSFVDQDDRVFVSETSGDLYFAQVRESDAGEYQCLVQSSTDHSPLSEISIEGR 753
Query: 174 ------LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L V P Q+ P++ ++ LR + E AY + +D
Sbjct: 754 YSPPITLRVTRRPP--GQVAPQLAVSERSVSALRGTTVRMECF--AYGNPVPRISWRRLD 809
Query: 228 LNELETP---NINID--GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 282
+ETP N +D L IT DAG YEC S+ G S T +IV+G P
Sbjct: 810 QFGVETPLPVNHYLDKWNQALIITKLDLQDAGFYECRAASSSGSASGSTQLIVQGVPQFL 869
Query: 283 GGVQVVEV 290
G+ V
Sbjct: 870 QGLSSQHV 877
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 151/437 (34%), Gaps = 80/437 (18%)
Query: 15 GVPDVTYSWFRNGELLNSETLP--LEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQ 71
G P + + W + P ++ DR F+ + + + E D YQC ++
Sbjct: 687 GHPGLVFHWVKT-------QFPSFVDQDDRVFVSETSGDLYFAQVRESDAGEYQCLVQSS 739
Query: 72 ----------LKTRYSSAQLRVLTLKPSFKKRPL----ESETYAGEGGNVTIFCNPEAAP 117
++ RYS +T +P + P E A G V + C P
Sbjct: 740 TDHSPLSEISIEGRYSPPITLRVTRRPPGQVAPQLAVSERSVSALRGTTVRMECFAYGNP 799
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--------NGNLLISPVSRDDSGIYSCTATNVHGMDE 169
P+ W++ + G N L+I+ + D+G Y C A + G
Sbjct: 800 VPRISWRR----LDQFGVETPLPVNHYLDKWNQALIITKLDLQDAGFYECRAASSSGSAS 855
Query: 170 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD----VAYIWTHNGVRIGN 225
+LIV P + + L + ++++L AH E D V+Y W HNG +
Sbjct: 856 GSTQLIVQGVPQFLQGL-------SSQHVELGGRAHWEVRTDGDYTVSYTWLHNGQVLNG 908
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP---GL- 281
L + L I+ D+G Y+CV + G+ ++ + + P GL
Sbjct: 909 GGRVALASSGSTAS---LSISGLRAEDSGVYQCVAFNQWGRANSAAELRAQDEPPSFGLR 965
Query: 282 --------PGGVQVVEVHKTSA---TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
GG V + + T+ W N + Y ++ + T +S+
Sbjct: 966 LLPEIIASAGGTVVFNMRRRGVPVPTVTWKKNGANVQLGGRYSMLDGGSLRITGVQLSDG 1025
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
G + T R A+ ST V G+ G PS + Y P
Sbjct: 1026 --GMYTCQLTNRMGAAT-------STATLTVQDGSSRSSGNPSRVTVDYQQDGTLPCST- 1075
Query: 391 SRIGGGGGKIGDLSISW 407
GG D+ +W
Sbjct: 1076 -----GGSSSSDVIKTW 1087
>gi|260822511|ref|XP_002606645.1| hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae]
gi|229291989|gb|EEN62655.1| hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae]
Length = 2215
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 228/485 (47%), Gaps = 40/485 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T CEA G P SW RNGE PL DQ + L+++ L + + A+YQ
Sbjct: 1297 DATILCEAAGTPTPEVSWKRNGE-------PLGDQANRRVSGTTLSLQELVKD-NSAVYQ 1348
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L TR ++A + V+ L P + Y + + + C +PKP+ W K
Sbjct: 1349 CIARNNLGTRITNAYINVVELPPIMLTAANKKYAYV-QDQDAQLDCLSFGSPKPEITWYK 1407
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ + +G R ++ NG L+I+ VS +D G Y C A N G + + L V +
Sbjct: 1408 EELL--AGDRYQVLSNGTLVITTVSTEDDGKYKCMAINKFGEEPLQAELSVKRK-TTIAT 1464
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P + + A Q C+ + L++ W NG+ I M + + P + G L I
Sbjct: 1465 PPIALEVRAGNEAQFVCAVDKDPDLELTITWLKNGIPI--MPGSRIMQPVL----GTLLI 1518
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
+ +D+ Y C+ ++T + S + + V P P +Q+ +S T+ W G+ N
Sbjct: 1519 KDTINSDSAIYTCLARTTRDEASAQAALSVIDVPEPPMNLQLSNQADSSVTLSWNVGSDN 1578
Query: 306 GRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
PI Y I N W +E+ G+ + + L PW TY+F+V A
Sbjct: 1579 NSPIEGYTIQYEENRMMPGEW---------QEMKVIDGKDILTADLDLNPWLTYQFRVTA 1629
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G EPS + Y TPA P P I G G + ++ ISWEPLP +QN P + Y+
Sbjct: 1630 RNKVGESEPSDATEGYTTPAAAPSSVPGGIKGEGTEPTNMVISWEPLPGLQQNGPGLKYE 1689
Query: 424 IFW--------RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+ + R++ D+++ +ET+ + V P+ YT YE+ VQA ND G GP
Sbjct: 1690 VRYRQQPEARKRRQADSDWTTETVNDPNGNEFIVEDTPT---YTAYEITVQAKNDFGDGP 1746
Query: 476 ESEVV 480
S+VV
Sbjct: 1747 LSDVV 1751
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 43/288 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DLT C G+P W R + +LP R + L I + ERD Y+
Sbjct: 1208 DLTLRCITEGLPTPEVRWRRT----SGGSLP---SARARVVGTSLIIEEVV-ERDAGSYE 1259
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N L + V P +K P E + A G + TI C P P+ WK+
Sbjct: 1260 CTASNSLGKDTYEVMVTV-NAAPYWKTEP-EGQMLA-PGDDATILCEAAGTPTPEVSWKR 1316
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+G +G R++ L + + +D+S +Y C A N G + + V+ +
Sbjct: 1317 NGEPLGDQANRRV-SGTTLSLQELVKDNSAVYQCIARNNLGTRITNAYINVV-------E 1368
Query: 186 LPPKITIAAHR--------NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
LPP + AA++ + QL C + ++ W + G D ++
Sbjct: 1369 LPPIMLTAANKKYAYVQDQDAQLDCLSFGSPKPEIT--WYKEELLAG--DRYQV------ 1418
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVG------KISTKTTVIVEGPP 279
+ G L IT S D G+Y+C+ + G ++S K + PP
Sbjct: 1419 LSNGTLVITTVSTEDDGKYKCMAINKFGEEPLQAELSVKRKTTIATPP 1466
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 33/298 (11%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-NQLK 73
+P T W ++G + P++ +R I I E D Y CRA+ ++L
Sbjct: 1115 AIPPPTIYWTKDG------SNPIDLTERISIDAENSLIFANVEEGDAGEYSCRAEYSKLG 1168
Query: 74 TRYSSAQLRVL--------TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
T + L ++ PSF KR + G ++T+ C E P P+ W++
Sbjct: 1169 TIRIANTLTLIVDTASPRGARAPSFLKRDINLPP-VNRGEDLTLRCITEGLPTPEVRWRR 1227
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
R ++ +L+I V D+G Y CTA+N G D + + V P Y++
Sbjct: 1228 TSGGSLPSARARVV-GTSLIIEEVVERDAGSYECTASNSLGKDTYEVMVTVNAAP-YWKT 1285
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P +A + + C A +V+ W NG +G+ N + G L +
Sbjct: 1286 EPEGQMLAPGDDATILCEAAGTPTPEVS--WKRNGEPLGDQ-------ANRRVSGTTLSL 1336
Query: 246 TNASFADAGEYECVVKSTVG-KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
++ Y+C+ ++ +G +I+ +VE PP + + +K A +Q D
Sbjct: 1337 QELVKDNSAVYQCIARNNLGTRITNAYINVVELPP-----IMLTAANKKYAYVQDQDA 1389
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 121/341 (35%), Gaps = 87/341 (25%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL----NPERD-PAMYQ 65
CEA G P++ YSW +NG L+ ++ P + N TI NP++ YQ
Sbjct: 956 CEATGSPEIRYSWLKNGRELDVDSDP---SISWSAAPNSGTITIELDGDNPDKSYEGKYQ 1012
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFK-------------KRPLESETYAGEG-------- 104
CRA N T ++ ++T P F + L+ + GE
Sbjct: 1013 CRAANHRGTAVTNEIEVIITASPLFAFAEDREITVPVGAQHVLKCLSILGEAIHRIIIGL 1072
Query: 105 -----GNVTIFCNP---------------------------EAAPKPKFVWKKDG-NIIG 131
N+ I +P EA P P W KDG N I
Sbjct: 1073 CLMMSLNILIPASPLFAFAEDREITVPVGAQHVLKCLSILGEAIPPPTIYWTKDGSNPID 1132
Query: 132 SGGRRKIFENGNLLISPVSRDDSGIYSCTAT-NVHGMDESKGRLIVL---------HGPS 181
R I +L+ + V D+G YSC A + G L ++ PS
Sbjct: 1133 LTERISIDAENSLIFANVEEGDAGEYSCRAEYSKLGTIRIANTLTLIVDTASPRGARAPS 1192
Query: 182 YYEQ---LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
+ ++ LPP + +L LRC +V + T G L + +
Sbjct: 1193 FLKRDINLPP---VNRGEDLTLRCITEGLPTPEVRWRRTSGG---------SLPSARARV 1240
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G L I DAG YEC +++GK + + V V P
Sbjct: 1241 VGTSLIIEEVVERDAGSYECTASNSLGKDTYEVMVTVNAAP 1281
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 6/152 (3%)
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G + ++ + L P+ Y F V+ N G G PSSP + +TP P AP +
Sbjct: 1814 FEGDEPTALIDGLTPFKNYNFTVVPYNGKGDGPPSSPPVKASTPESTP-GAPGALRANVV 1872
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN----DTEFQSETLKEYGNVGIAVVRIPS 454
L + WE P E A Y + + + + + + VR+
Sbjct: 1873 DSKTLDVQWE-APLEPNGAITGYLLTYRTMPGPGVPEGRLGTPVEEVFDDPAKTSVRLEE 1931
Query: 455 EFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486
T Y ++++A +GPG E+ T DP
Sbjct: 1932 LDEQTWYRIELRAKTKIGPGDVKELETSTSDP 1963
>gi|432092483|gb|ELK25098.1| Contactin-6 [Myotis davidii]
Length = 760
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 150/480 (31%), Positives = 222/480 (46%), Gaps = 39/480 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P Y+W +NGE L +E +R +++ LTI LN D +YQ
Sbjct: 63 SLFWECKAQGKPRPWYTWLKNGERLGAE-------ERIQVENGTLTITMLNVS-DSGVYQ 114
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ T Y++A+LRVL +F S +A G + P A P+
Sbjct: 115 CAAENKHHTIYANAELRVL----AFLALSPASPGWALTMGR--LRAAPPACTLPQLC--- 165
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
SG + E+G+L I SR D+G Y+C ATN G+ S G L+V + +
Sbjct: 166 ------SGKVVFVLEDGSLKIQNASRSDAGPYTCVATNPFGVARSTGGLVVKER-TIITE 218
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL--- 242
P + + ++ L C + ++VA++W+ NG I DL + I GG
Sbjct: 219 PPSPMDVTVGESIVLTCQVSHDPSMEVAFVWSFNGHII---DLKKDAAHFERIGGGSVGD 275
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N + +G Y C V + + +S +IV GPP V+V + T++ + W G
Sbjct: 276 LMIRNIQLSHSGRYLCAVTTALENLSAVAEIIVRGPPE---EVRVEHISSTTSQLSWRPG 332
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ N PI + I ART ++ W VS + G+ + L+PW YEF+V+
Sbjct: 333 SDNNSPIQIFTIQARTPFSVGWQAVS-----TVPEILNGQTYNATVVGLIPWVEYEFRVL 387
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS S T A P AP+ I GGGG +L ++WEP+P E Q+ Y
Sbjct: 388 AGNSIGIGEPSKASELLRTKASVPIVAPTNIQGGGGSRSELVVTWEPIPEELQSGGEFGY 447
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ R + E + V R S + +EVKV N G G V+I
Sbjct: 448 LVMLRPVGSAIWTKERVPSV-EASRFVYRNESITPLSPFEVKVGVYNSEGEGAALSTVSI 506
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 172/469 (36%), Gaps = 60/469 (12%)
Query: 43 YFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA 101
+ ++D L I+ N R D Y C A N S+ L V+ + + P +
Sbjct: 171 FVLEDGSLKIQ--NASRSDAGPYTCVATNPFGVARSTGGL-VVKERTIITEPPSPMDVTV 227
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSG 155
GE +T + + + + FVW +G+II FE G+L+I + SG
Sbjct: 228 GESIVLTCQVSHDPSMEVAFVWSFNGHIIDLKKDAAHFERIGGGSVGDLMIRNIQLSHSG 287
Query: 156 IYSCTAT----NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 211
Y C T N+ + E I++ GP E++ + + L R + +
Sbjct: 288 RYLCAVTTALENLSAVAE-----IIVRGPP--EEVRVEHISSTTSQLSWRPGSDNNSPIQ 340
Query: 212 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---- 265
+ I +G ++ + P I ++G T EYE + +++G
Sbjct: 341 IFTIQARTPFSVGWQAVSTV--PEI-LNGQTYNATVVGLIPWVEYEFRVLAGNSIGIGEP 397
Query: 266 -----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNGRPITHYK 313
+ TK +V + P + GG ++ + W G G Y
Sbjct: 398 SKASELLRTKASVPIVAPTNIQGGGG----SRSELVVTWEPIPEELQSGGEFG-----YL 448
Query: 314 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373
++ R ++ W E V E R+ R E+ + P S +E KV N G G
Sbjct: 449 VMLRPVGSAIW--TKERVPSVEASRFVYRNES-----ITPLSPFEVKVGVYNSEGEGAAL 501
Query: 374 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 433
S + D+P AP ++ +SW + + + Y++ + + E
Sbjct: 502 STVSIVYSGEDEPQLAPRGTSAQSFSASEMEVSWTAIAWNRITGRVLGYEVLYWTDDSRE 561
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
++ +GN I I T Y V+A N G GP S V +
Sbjct: 562 PMIGKVRVHGN--ITTKTIMGLKANTIYFASVRAYNTGGTGPSSPPVNV 608
>gi|194769812|ref|XP_001966995.1| GF21814 [Drosophila ananassae]
gi|190622790|gb|EDV38314.1| GF21814 [Drosophila ananassae]
Length = 1407
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/469 (29%), Positives = 220/469 (46%), Gaps = 28/469 (5%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++T+ C A GVP+ SW NG+ + T R + DN +TI L + D Y
Sbjct: 355 EVTFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDNTITIINL-VKGDTGNYG 409
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N L Y L V L P +++P + + +G NVT+ C E APKP W +
Sbjct: 410 CNATNSLGYVYRDVYLNVQALPPEIREKPTDKSSV--DGRNVTMTCRVEGAPKPLVKWLR 467
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
N + +GGR + NG+L I V+ D+G Y+C A N G + G L+V + Q
Sbjct: 468 GSNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAENKFGNKSADGSLVVKEH-TRITQ 525
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P +AA ++ RC+ ++ LD+ W +G I D E + + + L I
Sbjct: 526 EPQNYEVAAGQSATFRCNEAHDDTLDIQIDWRKDGQPI---DF-ETQPRFVQTNDNSLTI 581
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
D+GEY CV ++ + + + K +IV+ P P + + A I W N
Sbjct: 582 AKTMELDSGEYTCVARTRLDEATAKANLIVQDVPNAPKLLGIT-CQADKAEISWEPQGDN 640
Query: 306 GRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI HY I T++ ++W E V + S + PW+ Y F+VIA
Sbjct: 641 RSPILHYTIQFNTSFTPASWDAAYEKVPNTDF---------SFVVQMSPWANYTFRVIAF 691
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G PS+ S T D PY+ P + G G + +L ISW P+P + NAP Y++
Sbjct: 692 NKIGPSPPSAHSESCTTQPDVPYKNPDNVVGQGREPNNLVISWTPMPEIEHNAPGFQYRV 751
Query: 425 FWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
W++ ++++ + ++ I + P+ + +Y +KV AIN+ G
Sbjct: 752 NWKRDIPAAPWENQNIYDWRQNNIVITDQPT---FVKYLIKVVAINEKG 797
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 118/287 (41%), Gaps = 35/287 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ N + +R Q ++ +P + D YQC A
Sbjct: 59 CEADGQPEPEYSWIKNGKKFNWQAY----DNRMLQQPGRGSLVITSPRDEDRGHYQCFAS 114
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFC-NPEAAPKPKFVWK-- 124
N+ T S S +R L +FK S+T A EG + C P+ P P W
Sbjct: 115 NEFGTATSNSVYVRKAELN-AFKDE--NSKTLEAVEGEPYMLKCAAPDGFPSPTVNWMIQ 171
Query: 125 --KDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGI---YSCTATNVHGMDESKGRLIVLH 178
D +I R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 172 EVSDASIKSINNSRMTLDPEGNLWFSNVTREDASADFYYACSATSVFRSEYKIGNKVLLD 231
Query: 179 ----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMD 227
G S + P + R L EL + +W+ +G RI D
Sbjct: 232 VKQMGVSASQNRHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD 291
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 292 --RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 22/230 (9%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNRHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P A + C A + + W HNG I E
Sbjct: 330 SIILEVNSVPYFTKEPEIKVAAEDEEVTFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
TPN + + I N D G Y C +++G + + V+ P
Sbjct: 382 STPNPRRTVTDNTITIINLVKGDTGNYGCNATNSLGYVYRDVYLNVQALP 431
>gi|136256388|ref|NP_851300.2| contactin-1a precursor [Danio rerio]
gi|134054472|emb|CAM73230.1| cntn1a [Danio rerio]
Length = 1032
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 147/488 (30%), Positives = 229/488 (46%), Gaps = 27/488 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D D +C+A G P + +NG + +++ + + L E D
Sbjct: 351 VDIGGDYIMSCQASGKPKPHVHFLKNGHM--------------YMKGHEVRFSRLGFE-D 395
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ +++A+LRV PSF+ P++ + G V C P AAP+P
Sbjct: 396 SGMYQCVAENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPN 455
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K ++ + R I+ +G+L + +S+ D G Y+C A N G S G L +
Sbjct: 456 ITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFAENDRGRANSTGSLSITDA- 514
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ P ++ + ++ C A + LD+ +IW+ +G I D + +
Sbjct: 515 TKITLAPSNADVSVGEDARMECVASHDPGLDLTFIWSLDGHTIDLQRDAQHYQRKMDSAS 574
Query: 240 G---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L IT+ AG Y C ++ V + ++V GPPG PGGV+V EV S
Sbjct: 575 GTSSSELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPGPPGGVRVDEVTSDSVR 634
Query: 297 IQWTDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ W+ G N PI+ Y + R + W + + + E G E + L+PW+
Sbjct: 635 VLWSHGTDNLSPISRYTVQLRESAAQQDWRDAATSPVNVE-----GNAEMATVVNLLPWT 689
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
YEF+VIA N LG G PS PSP+ T +P APS IGGGGG +L+I+W P+ +
Sbjct: 690 EYEFRVIATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGTSRELTITWTPVQSQYY 749
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N Y I ++ ND E+ T+ + V V + P T +EVK++A N G GP
Sbjct: 750 YGSNFGYIIAFKPHNDPEWLRVTVTD-PEVQKYVHKDPKIPPSTRFEVKMKAFNSQGEGP 808
Query: 476 ESEVVTIW 483
S I+
Sbjct: 809 FSNSAFIY 816
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 38/270 (14%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDN----VLTIRYLNPERDPAMYQCRAKNQL- 72
D+++ W N E +PL DQ R+ Q + T+R D Y C +
Sbjct: 175 DLSFRWMLNE---FPEFIPL-DQRRFVSQSTGNLYISTVR----STDSGNYSCFVSSPAI 226
Query: 73 -KTRYSSAQLRVLTLKPSFKKRPLE-----SETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
K+ +S V + S +K P + +++A G N+T+ C P P+ W+K
Sbjct: 227 AKSVFSKFIPLVPIAERSLRKYPADIKVKSPDSWALLGQNITLECFALGNPIPQIRWRKL 286
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
++ R + +G LL + + +D G+Y C A N G D K L V P + EQ
Sbjct: 287 DGVLPPL-RHDVSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHLYVEGAPDWLEQ 345
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ + +E + YI + ++ L+ ++ + G +
Sbjct: 346 I-----------------SSSEVDIGGDYIMSCQASGKPKPHVHFLKNGHMYMKGHEVRF 388
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ F D+G Y+CV ++ G I + V
Sbjct: 389 SRLGFEDSGMYQCVAENRHGVIHANAELRV 418
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 13/183 (7%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGR-RKIFENG 142
P F+++PL++ Y E +T+ C A P + W+ + ++ GG G
Sbjct: 46 PVFEEQPLDT-IYPEESPEEKITLTCRTRANPPASYRWRLNNAELVLAEGGDPHYSVSEG 104
Query: 143 NLLIS-PVSRDDSGIYSCTATNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 200
NLLIS P +G Y+C A+N +G + + R+ + + + + + L
Sbjct: 105 NLLISSPDKSKHAGNYTCVASNQYGSVTSRRARVQFGYLDMFSTDEREAVYVKEGQGAVL 164
Query: 201 RCSAHTEELLDVAYIWTHNGV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C+ D+++ W N +D ++ G L I+ D+G Y C
Sbjct: 165 LCAPPPHFPEDLSFRWMLNEFPEFIPLDQRRF----VSQSTGNLYISTVRSTDSGNYSCF 220
Query: 260 VKS 262
V S
Sbjct: 221 VSS 223
>gi|55976512|sp|Q8AXZ4.1|CNT1A_DANRE RecName: Full=Contactin-1a; AltName: Full=F3/F11/contactin;
AltName: Full=Neural cell recognition molecule F11;
Flags: Precursor
gi|23345063|gb|AAN17734.1| recognition molecule F3/F11/contactin [Danio rerio]
Length = 1032
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 228/488 (46%), Gaps = 27/488 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D D +C+A G P + +NG + +++ + + L E D
Sbjct: 351 VDIGGDYIMSCQASGKPKPHVHFLKNGHM--------------YMKGHEVRFSRLGFE-D 395
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ +++A+LRV PSF+ P++ + G V C P AAP+P
Sbjct: 396 SGMYQCVAENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPN 455
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K ++ + R I+ +G+L + +S+ D G Y+C A N G S G L +
Sbjct: 456 ITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFAENDRGRANSTGSLSITDA- 514
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ P ++ + ++ C A + LD+ +IW+ +G I D + +
Sbjct: 515 TKITLAPSNADVSVGEDARMECVASHDPGLDLTFIWSLDGHTINLQRDAQHYQRKMDSAS 574
Query: 240 G---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L IT+ AG Y C ++ V + ++V GPPG PGGV+V EV S
Sbjct: 575 GTSSSELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPGPPGGVRVDEVTSDSVR 634
Query: 297 IQWTDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ W+ G N PI+ Y + R + W + + + E G E + L+PW+
Sbjct: 635 VLWSHGTDNLSPISRYTVQLRESAAQQDWRDAATSPVNVE-----GNAEMATVVNLLPWT 689
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
YEF+VIA N LG G PS PSP+ T +P APS IGGGGG +L+I+W P+ +
Sbjct: 690 EYEFRVIATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGTSRELTITWTPVQSQYY 749
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N Y I ++ ND E+ T+ + V + P T +EVK++A N G GP
Sbjct: 750 YGSNFGYIIAFKPHNDPEWLRVTVTD-PEAQKYVHKDPKIPPSTRFEVKMKAFNSQGEGP 808
Query: 476 ESEVVTIW 483
S I+
Sbjct: 809 FSNSAFIY 816
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 38/270 (14%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDN----VLTIRYLNPERDPAMYQCRAKNQL- 72
D+++ W N E +PL DQ R+ Q + T+R D Y C +
Sbjct: 175 DLSFRWMLNE---FPEFIPL-DQRRFVSQSTGNLYISTVR----STDSGNYSCFVSSPAI 226
Query: 73 -KTRYSSAQLRVLTLKPSFKKRPLE-----SETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
K+ +S V + S +K P + +++A G NVT+ C P P+ W+K
Sbjct: 227 AKSVFSKFIPLVPIAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNPIPQIRWRKL 286
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
++ R + +G LL + + +D G+Y C A N G D K L V P + EQ
Sbjct: 287 DGVLPPL-RHDVSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHLYVEGAPDWLEQ 345
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ + +E + YI + ++ L+ ++ + G +
Sbjct: 346 I-----------------SSSEVDIGGDYIMSCQASGKPKPHVHFLKNGHMYMKGHEVRF 388
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ F D+G Y+CV ++ G I + V
Sbjct: 389 SRLGFEDSGMYQCVAENRHGVIHANAELRV 418
>gi|195132305|ref|XP_002010584.1| GI16006 [Drosophila mojavensis]
gi|193909034|gb|EDW07901.1| GI16006 [Drosophila mojavensis]
Length = 1302
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 215/468 (45%), Gaps = 26/468 (5%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++ + C+A G P+ T W NG+ + E R + +N + I L + D Y
Sbjct: 363 EVVFNCKAAGHPEPTIQWIHNGKPIEQS----EPNPRRTVTNNYIKIVNL-VKNDTGNYG 417
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N L Y L VL L P ++ P T G N+T+ C APKP+ W+
Sbjct: 418 CNATNSLGYVYKDVYLNVLALPPEIQEPPRAEATVNGR--NITMRCRVFGAPKPQVKWRH 475
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ N + +GGR + +G+L I V+ D+G Y+C A N G + ++G L+V + Q
Sbjct: 476 NHNWL-TGGRYTVLPSGDLQIQEVTFADNGNYTCLAVNKFGNETAQGSLVVKER-TRITQ 533
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P +AA ++ RC+ ++ LD+ W +G I E + + L I
Sbjct: 534 EPQNYEVAAGQSATFRCNEAHDDTLDLEIEWLKDGQPIDFA----AEARFVKTNDNSLTI 589
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
D+GEY CV ++ + + + K +IV+ P P + + A I W N
Sbjct: 590 AKTQELDSGEYTCVARTQLDEATAKANLIVQDVPNQPRLIGIT-CQADKAEISWEPQGDN 648
Query: 306 GRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI HY I T++ ++W E V + S + PW+ Y F+VIA
Sbjct: 649 RSPILHYTIQFNTSFTPASWDTAYEKVPSTDF---------SFVVQMSPWANYTFRVIAY 699
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G EPS S T D PY+ P + G G + +L ISW P+P + NAPN Y++
Sbjct: 700 NKIGPSEPSGHSDMCTTQPDVPYKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFQYRV 759
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
W++ D + K+ N + IP + + +Y +KV AIN G
Sbjct: 760 SWKR--DIPAAAWENKDIYNWRQDNLLIPDQPTFVKYHIKVVAINAKG 805
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 99/262 (37%), Gaps = 36/262 (13%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + + Y +L +K P ++ A G V ++C
Sbjct: 218 YACSATSVFRNEYKIGNKILLDVKQMGVSASQNRYPPKRQYVTRKNEVALRGKRVELYCI 277
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW K+G + R G +L+I + DD G YSC +N G +S
Sbjct: 278 YGGTPLPQTVWLKNGKRVEWNDRITQGNYGKSLVIRQANFDDEGTYSCDVSNGVGQAQSY 337
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGVRIGNMDLN 229
+ +H Y+ + P A + C A H E + W HNG I + N
Sbjct: 338 SINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTIQ----WIHNGKPIEQSEPN 393
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPGGVQVV 288
P + ++I N D G Y C +++G + + ++ PP ++
Sbjct: 394 ----PRRTVTNNYIKIVNLVKNDTGNYGCNATNSLGYVYKDVYLNVLALPP------EIQ 443
Query: 289 EVHKTSATIQWTDGATNGRPIT 310
E + AT+ NGR IT
Sbjct: 444 EPPRAEATV-------NGRNIT 458
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 15/183 (8%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
N ++T C FG P W N L + IQ+ D
Sbjct: 453 NGRNITMRCRVFGAPKPQVKWRHNHNWLTGGRYTVLPSGDLQIQEVTFA--------DNG 504
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPK 120
Y C A N+ + L V+ + + P E AG+ + T CN + +
Sbjct: 505 NYTCLAVNKFGNETAQGSL-VVKERTRITQEPQNYEVAAGQ--SATFRCNEAHDDTLDLE 561
Query: 121 FVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG I + + + +L I+ DSG Y+C A +K LIV
Sbjct: 562 IEWLKDGQPIDFAAEARFVKTNDNSLTIAKTQELDSGEYTCVARTQLDEATAKANLIVQD 621
Query: 179 GPS 181
P+
Sbjct: 622 VPN 624
>gi|198435834|ref|XP_002122484.1| PREDICTED: similar to Contactin-2 precursor (Axonin-1) (Axonal
glycoprotein TAG-1) (Transient axonal glycoprotein 1)
(TAX-1) [Ciona intestinalis]
Length = 815
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 232/499 (46%), Gaps = 43/499 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPER 59
+D + C A VP +++W +NG +L +S + + + D D Y E
Sbjct: 324 VDRTTSASIQCGAIAVPTPSFTWLKNGVVLGDSGNINIGNFDGGSQLD-----IYDVSEA 378
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D MYQC N + +SSA++ V+++ P+ + P+ T A V I C+ EAAP
Sbjct: 379 DQGMYQCVVSNSHGSIFSSAKMAVVSIPPTIIE-PVPDITRAALDNEVIITCDIEAAPAA 437
Query: 120 KFVWKKDGN-IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
VW KD + ++ + ++ L IS ++ D+G+Y+C A N G +S+G L + +
Sbjct: 438 VIVWTKDTDQVLVIDNNKYTLQSDGLKISNLANGDAGVYNCYAENDMGNVQSEGTLQI-Y 496
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P+ P + +Q+ C A + L++ + WT NG I D + I
Sbjct: 497 LPTVITTGPQGNEVIVGDLVQMGCQATHDNQLELTWSWTQNGEAISVFD------KHYTI 550
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G + I + S AG Y+C + VG TV+V PP P V V ++ + T+Q
Sbjct: 551 SGDSILIKDVSSEQAGIYQCCANTDVGTDCASATVVVMAPPEPPTNVMVTNSYENTVTLQ 610
Query: 299 WTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G NG + Y + A+ ++ +W F V+ + V+ T + + L+P + Y
Sbjct: 611 WQAGNDNGAAVDLYLVEAKCGFDCSWRFIVTSPIF---VNTTTCQVKK-----LLPNNDY 662
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
F+V A N+ G G PS PS Y++P P + P +I G ++G+L + W+P+ +
Sbjct: 663 MFRVTAMNKYGTGAPSEPSAVYSSPPGAPIRHPIKIKGASKELGELVVQWQPMQPKYFGD 722
Query: 418 PNIYYKIFWRKK------------NDTEFQS-------ETLKEYGNVGIAVVRIPSEFYY 458
+I YK+ RK+ NDT E + G ++ + +
Sbjct: 723 NDISYKVVIRKQVRGDPVVLPVNLNDTNVPPVDNRPWIEQVAIGGTKNQTTFKVNASEIF 782
Query: 459 TEYEVKVQAINDVGPGPES 477
YEVKVQA+N+ GPGP S
Sbjct: 783 VPYEVKVQAVNNYGPGPFS 801
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 86 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNL 144
P F P + T A GG I C P P+ W K DG + I E G L
Sbjct: 222 FDPEFMLVP-KPVTNAKRGGYAIIECFASGRPTPQLSWTKLDGPM---PVNHTISEAGQL 277
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
++ V+ D +G Y CTA N G + G L + + P + P + + R
Sbjct: 278 ILKAVTEDMAGTYRCTAVNSKGSTHADGELRLEYAPQWTS---PISSFSVDRTTSASIQC 334
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DGG-LLEITNASFADAGEYECVV 260
+ ++ W NGV +G ++ NINI DGG L+I + S AD G Y+CVV
Sbjct: 335 GAIAVPTPSFTWLKNGVVLG-------DSGNINIGNFDGGSQLDIYDVSEADQGMYQCVV 387
Query: 261 KSTVGKI-STKTTVIVEGPPGL 281
++ G I S+ +V PP +
Sbjct: 388 SNSHGSIFSSAKMAVVSIPPTI 409
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
+ C A+ ++D Y W +G + D + + + GG LEI+N +DAG+Y+
Sbjct: 39 ISFTCKAN---VVDPVYTWRKDGSPVDTADGSRFQ-----VHGGTLEISNPQDSDAGDYQ 90
Query: 258 CVVKSTVGKISTKTTVIVEG 277
CV+ S G + + +V G
Sbjct: 91 CVLSSVDGTVVSNYGKLVFG 110
>gi|344276742|ref|XP_003410166.1| PREDICTED: contactin-2 [Loxodonta africana]
Length = 1048
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 208/425 (48%), Gaps = 8/425 (1%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 397 DSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEIIIPCQPRAAPKA 456
Query: 120 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
+W K I+ + R + +G L+I +SR D G Y+C A N G S G L V
Sbjct: 457 VVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENSMGKANSTGTLSVRDA 516
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINI 238
+ P I NL L+C A + +D+ + WT + I + + ++
Sbjct: 517 -TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPRGHYQRASVKE 575
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L I NA G+Y CV ++ V S + TV+V GPPG PGGV V ++ T+ +
Sbjct: 576 TVGDLTILNAQLRHGGKYTCVAQTVVDSASKEATVLVRGPPGPPGGVVVRDISDTTVQLS 635
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
W+ G N PI Y + ART W +V + E G E + L PW YE
Sbjct: 636 WSRGFDNHSPIAKYTLQARTPLAGKWKHVRTNPANIE-----GNAETAQVLGLTPWMDYE 690
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V+A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 691 FRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIINWTPMSREYQNGD 750
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y + +R++ +Q+ + + V S YT ++VK+++ N G GPES
Sbjct: 751 GFGYLLSFRRQGSASWQTARVPG-ADARHFVYSNESVRPYTPFQVKIRSYNRRGEGPESL 809
Query: 479 VVTIW 483
++
Sbjct: 810 TALVY 814
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 119/288 (41%), Gaps = 38/288 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG + LE R+ + L I +D +YQC
Sbjct: 57 VTLACGARASPPATYRWKMNGTEIK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQC 111
Query: 67 RAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 112 LASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 169
Query: 124 -KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 170 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 227
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN---I 238
P++ + N++ R A T L V T GN P I +
Sbjct: 228 NLAAEDPRLFVP---NIKARFPAETYAL--VGQQVTLECFAFGN------PVPRIKWRKV 276
Query: 239 DGGL----------LEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276
DG L L+I + SF D G YEC +++ G+ + + +IV+
Sbjct: 277 DGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQ 324
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 142 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 201
G+L S +S +DSG+Y C A N HG + L V + P + I A R ++
Sbjct: 386 GDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEII 445
Query: 202 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
+W+ G L + DG L+ I N S +D G+Y C +
Sbjct: 446 IPCQPRAAPKAVVLWSK-----GTEILVNSSRVTVTPDGTLI-IRNISRSDEGKYTCFAE 499
Query: 262 STVGKISTKTTVIV 275
+++GK ++ T+ V
Sbjct: 500 NSMGKANSTGTLSV 513
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ ++ K+ + N G G P S + + ++P AP+++ G +++++WEP+ R
Sbjct: 788 PYTPFQVKIRSYNRRGEG-PESLTALVYSAEEEPRLAPAKVWANGISSSEMNVTWEPVQR 846
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 847 D-MNGVLLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVTGLHPNTKYHVTVRAYNRAG 903
Query: 473 PGPES 477
GP S
Sbjct: 904 TGPAS 908
>gi|444706384|gb|ELW47726.1| Contactin-2 [Tupaia chinensis]
Length = 1019
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 224/495 (45%), Gaps = 61/495 (12%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D A+L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGANLHWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG V I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEVVIPCEPRAAPKAIV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + ++
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASVKETV 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V + + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSAAKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTLPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N LG GEPS PS + T P APS + GGGG G+L+I+W
Sbjct: 685 VLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELTINWT------------ 732
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP---SEFY---------YTEYEVKVQAI 468
G+ G R+P ++++ YT +EVK+++
Sbjct: 733 ----------------------GSAGWQTARVPGADAQYFVYSNESVRPYTPFEVKIRSY 770
Query: 469 NDVGPGPESEVVTIW 483
N G GPES ++
Sbjct: 771 NRRGDGPESLTALVY 785
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ + NL C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDMEADIGANLHWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 118/294 (40%), Gaps = 38/294 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +T C A P +Y W NG + LE R+ + L I +D +
Sbjct: 54 EEQVTLACRARASPPASYRWRMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGV 108
Query: 64 YQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKF 121
YQC A N + T S A LR L+ K+ +T+ EG V + CNP A P +
Sbjct: 109 YQCLASNPVGTVVSREAILRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSY 166
Query: 122 VW--KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV-- 176
W + N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 167 RWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKF 224
Query: 177 -----------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
L PS + P + + + L C A + RI
Sbjct: 225 AQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKW 273
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 274 RKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+S+A+ + T P F+ +PL S + E VT+ C A+P + W+ +G +
Sbjct: 25 WSAARGSLATFGPVFEDQPL-SLLFPEESTEEQVTLACRARASPPASYRWRMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDPV 143
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG------- 240
K L AH L +Y W N E PN I DG
Sbjct: 144 KTHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHFVSQT 188
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 189 TGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 178/482 (36%), Gaps = 57/482 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
CE P W + E+L NS + + D L IR ++ D Y C A+
Sbjct: 440 CEPRAAPKAIVLWSKGTEILVNSSRVTV-------TPDGTLIIRNIS-RSDEGKYTCFAE 491
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
N + S+ L V +TL PS L G N+T+ C+ P F
Sbjct: 492 NFMGKANSTGILSVRDATKITLAPSSADINL--------GDNLTLQCHASHDPTMDLTFT 543
Query: 123 WKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D I G RR + G+L I G Y+C A V +D +
Sbjct: 544 WTLDDFPIDFDKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTV--VDSAAKEAT 601
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
VL + +QL S + +A +T + ++ T
Sbjct: 602 VLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTLPAGKWKQVRTNP 660
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
NI+G +YE V ++ ++ G P P + + +
Sbjct: 661 ANIEGNAETAQVLGLTPWMDYEFRVLAS--------NILGTGEPSGPS--SKIRTKEAAP 710
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
++ + + G I NW + + V G + + E+ + P++
Sbjct: 711 SVAPSGLSGGGGAPGELTI----NWTGSAGWQTARVPGADAQYFVYSNES-----VRPYT 761
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+E K+ + N G G P S + + ++P AP+++ G +++++WEP ++
Sbjct: 762 PFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPAKVWAKGVSSSEMNVTWEP-GQQDT 819
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G GP
Sbjct: 820 NGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAGTGP 877
Query: 476 ES 477
S
Sbjct: 878 AS 879
>gi|348502549|ref|XP_003438830.1| PREDICTED: neurofascin-like [Oreochromis niloticus]
Length = 1149
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 218/474 (45%), Gaps = 35/474 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T SWF NGE + + T PL ++ + L R + E + A+YQC A N
Sbjct: 348 CRADGAPRPTISWFINGEPIETAT-PLPNRQ---VSGETLIFRSVTTE-NTAVYQCNASN 402
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
Q ++A + VL P E EG + C +P P+ W K G
Sbjct: 403 QYGYLLANAFINVLHATPRILGARNEF-IKVTEGSRTFLDCQYFGSPLPELRWSKYGQGN 461
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
G R K NG L I + +D G Y C +N+ G DE + R+ V P P +
Sbjct: 462 LEGNRFKTHSNGTLEIKHIKIEDQGTYVCVVSNIAGRDEDQVRVEVKE-PILIVTRPQSM 520
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
+ +++L C + + W N ++ L I++D L ITN +
Sbjct: 521 KVMRATDVRLECGVKADVTTPITTTWLKNK---KHLTLGW----RISMDESNLVITNVNT 573
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
D G Y CV+KS + + S ++V P P +++ + ++ + + W G +N PIT
Sbjct: 574 GDEGNYTCVIKSELEQKSASAHLMVMDRPNPPTNLELSDPYERTVRLSWVPGDSNHSPIT 633
Query: 311 HYKI-IARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 368
+ + +W W N+S Y G + I + L+P++ YEF+VIA NE+G
Sbjct: 634 GFLVQYDDDDWLPGKWRNLST---------YPGNLNSVILH-LIPFTYYEFRVIAINEIG 683
Query: 369 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 428
PS PS ++ T P P + G G ++ ISWEPL + N P++ Y ++WR+
Sbjct: 684 ASRPSRPSKRFQTSGAPPDIIPKNLKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRR 743
Query: 429 KNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ E E+ N ++ I +T YE+KVQA+ND G GPES VV
Sbjct: 744 RDSRE-------EWKNATTKWLKYYIYDADTFTPYEIKVQAVNDFGLGPESPVV 790
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 189/489 (38%), Gaps = 79/489 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L C A G+P +W ++GE L + IQ + D Y
Sbjct: 252 ELLLECIAAGMPTPHITWAKDGEDLQVTSRMKVKNFNKMIQIPKASF------EDAGEYT 305
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN+L + +RV P + ++P E G + C + AP+P W
Sbjct: 306 CTAKNRLGYAEHTITVRV-KATPFWLEKPTNLILAPEENGR--LVCRADGAPRPTISWFI 362
Query: 126 DGNIIGSGG---RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I + R++ L+ V+ +++ +Y C A+N +G + + VLH
Sbjct: 363 NGEPIETATPLPNRQV-SGETLIFRSVTTENTAVYQCNASNQYGYLLANAFINVLHA--- 418
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETP 234
P+I A RN ++ + + LD Y W+ G GN++ N +T
Sbjct: 419 ----TPRILGA--RNEFIKVTEGSRTFLDCQYFGSPLPELRWSKYGQ--GNLEGNRFKTH 470
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+ G LEI + D G Y CVV + G+ + V V+ P + Q ++V +
Sbjct: 471 S----NGTLEIKHIKIEDQGTYVCVVSNIAGRDEDQVRVEVKEPILIVTRPQSMKVMR-- 524
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV-IGKEVDRYTGRKEASIENV--- 350
AT+ R K T +TW +H+ +G + I NV
Sbjct: 525 --------ATDVRLECGVKADVTTPITTTWLKNKKHLTLGWRIS--MDESNLVITNVNTG 574
Query: 351 ------LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
V S E K + + + P+ P+ N PY+ R
Sbjct: 575 DEGNYTCVIKSELEQKSASAHLMVMDRPNPPT---NLELSDPYERTVR------------ 619
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY-GNVGIAVVRIPSEFYYTEYEV 463
+SW +P + ++P + + + + + L Y GN+ ++ + +T YE
Sbjct: 620 LSW--VPGDSNHSPITGFLVQYDDDDWLPGKWRNLSTYPGNLNSVILHL---IPFTYYEF 674
Query: 464 KVQAINDVG 472
+V AIN++G
Sbjct: 675 RVIAINEIG 683
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 114/295 (38%), Gaps = 25/295 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL-NPER 59
+D + + CEA G P +SW RNG+ N + + Q + L I NPE+
Sbjct: 42 VDPKGTMVIECEAKGNPHPIFSWRRNGKYFN---VARDSQVSMRRRSGTLDIYARNNPEK 98
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
A YQC A NQ + YS + L P + + +E + G + + C+ P PK
Sbjct: 99 YEAEYQCIASNQYGSAYSHKIILQLYRPPVWPREIVEPVVVSA-GLPLVLSCDPPPGPPK 157
Query: 119 PKFVWKK---DGNIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATNVHG-------- 166
P+ W + R + +G+L S V +DS + Y C A +
Sbjct: 158 PETYWMSTFPTMQPVRQDRRVSMGVSGDLYFSNVLFNDSVVDYCCNARFPYKNVIQQKMP 217
Query: 167 --MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+ R +V P++ ++ + +L + W +G
Sbjct: 218 VVVKVLTTRAVVEAAPTWLSPTGSSSSVLVLQGEELLLECIAAGMPTPHITWAKDG---- 273
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
DL + +++I ASF DAGEY C K+ +G TV V+ P
Sbjct: 274 -EDLQVTSRMKVKNFNKMIQIPKASFEDAGEYTCTAKNRLGYAEHTITVRVKATP 327
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 94/252 (37%), Gaps = 23/252 (9%)
Query: 64 YQCRAKNQLKTRYSSAQ---LRVLTLKPSFKKRPL-------ESETYAGEGGNVTIFCNP 113
Y C A+ K ++VLT + + P S +G + + C
Sbjct: 200 YCCNARFPYKNVIQQKMPVVVKVLTTRAVVEAAPTWLSPTGSSSSVLVLQGEELLLECIA 259
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
P P W KDG + R K+ N + I S +D+G Y+CTA N G E
Sbjct: 260 AGMPTPHITWAKDGEDLQVTSRMKVKNFNKMIQIPKASFEDAGEYTCTAKNRLGYAEHTI 319
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ V P + E+ P + +A N +L C A ++ W NG I
Sbjct: 320 TVRVKATPFWLEK-PTNLILAPEENGRLVCRADGAPRPTIS--WFINGEPIETAT----P 372
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPGG----VQV 287
PN + G L + + + Y+C + G + + ++ P + G ++V
Sbjct: 373 LPNRQVSGETLIFRSVTTENTAVYQCNASNQYGYLLANAFINVLHATPRILGARNEFIKV 432
Query: 288 VEVHKTSATIQW 299
E +T Q+
Sbjct: 433 TEGSRTFLDCQY 444
>gi|195393480|ref|XP_002055382.1| GJ18818 [Drosophila virilis]
gi|194149892|gb|EDW65583.1| GJ18818 [Drosophila virilis]
Length = 1292
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 220/469 (46%), Gaps = 28/469 (5%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++ + C+A G P+ T W NG+ + SE P R + +N + I L ++D Y
Sbjct: 354 EVIFNCKAAGHPEPTIQWIHNGKPIAQSEPNP-----RRTVTNNYIKIVNL-VKKDTGNY 407
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L VL L P ++ P T G N+T+ C APKP+ W+
Sbjct: 408 GCNATNSLGYVYKDVYLNVLALPPEIQEPPRAEATVNGR--NITMRCRVFGAPKPQVKWR 465
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + +G+L I V+ D+G Y+C A N G ++G L+V +
Sbjct: 466 HNNNWL-TGGRYNVLPSGDLEIQEVTFADNGNYTCLAVNKFGNATAEGSLVVKER-TRIT 523
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ LD+ W +G I D + E + + L
Sbjct: 524 QEPQNYEVAAGQSATFRCNEAHDDTLDLEIEWLKDGQPI---DF-DAEARFVKTNDNSLT 579
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + K +IV+ P P + ++ A I W
Sbjct: 580 IAKTMELDSGEYTCVARTQLDEATAKANLIVQDVPNAPRLIGII-CQADKAKISWEPQGD 638
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V + S + PW+ Y ++VIA
Sbjct: 639 NRSPILHYTIQFNTSFTPASWDTAYEKVPSTDF---------SFVLQMSPWANYTYRVIA 689
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS S T D PY+ P + G G + +L I+W P+P + NAPN Y+
Sbjct: 690 FNKIGPSPPSGHSEACTTQPDVPYKNPDNVVGQGTEPTNLVITWTPMPEIEHNAPNFQYR 749
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ D + K+ + + IP + + +Y +KV AIN+ G
Sbjct: 750 VSWKR--DIPAATWENKDIYDWRQNNLLIPDQPTFVKYHIKVVAINERG 796
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 108/280 (38%), Gaps = 42/280 (15%)
Query: 51 TIRYLNPERDPAM----YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPL 95
T+ + N RD A Y C A + + Y +L +K P ++
Sbjct: 192 TLWFSNVTRDDASGDFWYACSATSVFRNEYKIGNKILLDVKQMGVSASQNRYPPKRQYVT 251
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDS 154
A G V +FC P P+ VW KDG + R G +L+I + DD
Sbjct: 252 RKNEVALRGKRVELFCIYGGTPLPQTVWYKDGKRVEWNDRITQGNYGKSLVIRQANFDDE 311
Query: 155 GIYSCTATNVHGMDESKGRLIVL--HGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELL 210
G Y+C +N G+D+++ I L H Y+ + P A + C A H E +
Sbjct: 312 GTYNCDVSN--GVDQAQSYSINLKIHAIPYFTEEPEIQNAAEDEEVIFNCKAAGHPEPTI 369
Query: 211 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
W HNG I + N P + ++I N D G Y C +++G +
Sbjct: 370 Q----WIHNGKPIAQSEPN----PRRTVTNNYIKIVNLVKKDTGNYGCNATNSLGYVYKD 421
Query: 271 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
+ V LP +Q E + AT+ NGR IT
Sbjct: 422 VYLNVL---ALPPEIQ--EPPRAEATV-------NGRNIT 449
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 112/281 (39%), Gaps = 33/281 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ Y W +NG+ + + +R Q T+ +P + D YQC A
Sbjct: 58 CEADGQPEPEYRWIKNGKKFDWQAY----DNRMLRQPGRGTLVITSPKDEDLGQYQCFAS 113
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKKDGN 128
N+ S++ +FK S A EG ++ C P+ PKP W
Sbjct: 114 NEFGVATSNSVFVRKAELNAFKDEAARS-VEAVEGEPFSLQCEAPDGWPKPTVNWLIQQT 172
Query: 129 IIG-----SGGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH-- 178
I + R + G L S V+RDD+ Y+C+AT+V + G I+L
Sbjct: 173 IDAGIKSINNSRMTLDPEGTLWFSNVTRDDASGDFWYACSATSVFRNEYKIGNKILLDVK 232
Query: 179 --GPSYYE-QLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + + PPK +N ++ EL + +W +G R+ D
Sbjct: 233 QMGVSASQNRYPPKRQYVTRKN-EVALRGKRVELFCIYGGTPLPQTVWYKDGKRVEWND- 290
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
+ N G L I A+F D G Y C V + V + +
Sbjct: 291 -RITQGNY---GKSLVIRQANFDDEGTYNCDVSNGVDQAQS 327
>gi|321459544|gb|EFX70596.1| hypothetical protein DAPPUDRAFT_309386 [Daphnia pulex]
Length = 1246
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 213/470 (45%), Gaps = 36/470 (7%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
+ CEA G P W NG+ + + R + N + I L + D Y C A
Sbjct: 356 FRCEANGSPAPEIKWIHNGKPIEEAAV----NPRRKVFPNRIVIERLQ-KSDTGNYGCNA 410
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N + Y L VL L P + P ++ T G N+T C +PKP W +DG
Sbjct: 411 TNSIGYVYKDVYLNVLALAPDIEDAPDDTATVDGSAVNLT--CKVFGSPKPLVKWIRDG- 467
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH------GPSY 182
+ +GGR ++ ++G+L I V+ D+G+YSC ATN G + G LIV GP
Sbjct: 468 LELTGGRYRVMDSGDLEIRDVTFTDAGVYSCHATNKFGSANANGTLIVKERTVIRDGPED 527
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
YE +AA + RC+A + L++ W H I D E E +
Sbjct: 528 YE-------VAAGQTATFRCNAVADSSLNLTIEWLHADQLI---DF-EQEPRFVQSQDSS 576
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L IT + D G+Y C K+ + K T+IV+ P P V + + + A I+WT
Sbjct: 577 LTITKTTELDTGDYTCRAKTILDLAEDKATLIVQDVPNRPRMVGI-QCNNRDAAIEWTPS 635
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI Y I T++ + VS + R+ +E + PWS Y F+VI
Sbjct: 636 GDNRAPILTYTIQFNTSFTPDSWEVSFENVPATETRF------KVE--MSPWSNYTFRVI 687
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G PS S TP D P + P + G G +L ++W P+P + N N +Y
Sbjct: 688 ARNKIGPSLPSDHSSMCTTPPDVPNKNPDNVEGRGTSPTNLVVTWNPMPEIEHNGRNFHY 747
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+++WR+ D + ++ + + + IP++ + Y +KV A N +G
Sbjct: 748 RVYWRR--DIPGEDWNIEMISDWRQSSILIPNQPTFKRYRIKVVAFNQIG 795
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A G ++ ++C P P+ W K+G + +G L+I V +D+G Y C
Sbjct: 257 AHRGKSIELWCVFGGTPLPQIRWTKEGAALPAGRTTYSSYGKTLIIKSVDSEDAGNYECE 316
Query: 161 ATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNL-QLRCSAHTEELLDVAYIWTH 218
A+N G+ +S L VL P Y + P++ + A L + RC A+ ++ W H
Sbjct: 317 ASNGVGLAKSYSISLQVLAAP--YFTVEPEVYVGAEDELAEFRCEANGSPAPEIK--WIH 372
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
NG I +N P + + I +D G Y C +++G +
Sbjct: 373 NGKPIEEAAVN----PRRKVFPNRIVIERLQKSDTGNYGCNATNSIGYV 417
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 112/290 (38%), Gaps = 43/290 (14%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N CEA G P Y W +NG + L DR Q T+ P + D
Sbjct: 50 ENDKPFIIECEAEGEPAPKYRWVKNG----FDFLWQSYDDRISQQPGRGTLVITTPRDED 105
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
YQC A N+ T S++ + SFK P + + A EG ++ C P+ PKP
Sbjct: 106 IGQYQCFASNEWGTATSNSVFVRKSDLNSFKDEPPMTVS-AQEGSPFSLRCQPPDGWPKP 164
Query: 120 KFVW---KKDGNIIG-SGGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKG 172
W +G + + R + G L S V+R+D+ +Y+C+AT++ + G
Sbjct: 165 SVYWMMQNSNGALRSINSSRMTVDPEGTLWFSNVTREDTSDDFVYACSATSLFRNEYKLG 224
Query: 173 RLIVL-------------HGPSYYEQLPPKITIAAHR--NLQLRCSAHTEELLDVAYIWT 217
+ L H P Q + AHR +++L C L + WT
Sbjct: 225 NKVYLDVIATGSAAAQNRHEP--VSQYVSRKNAVAHRGKSIELWCVFGGTPLPQIR--WT 280
Query: 218 HNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
G + G + G L I + DAG YEC + VG
Sbjct: 281 KEGAALPAGRTTYSSY--------GKTLIIKSVDSEDAGNYECEASNGVG 322
>gi|224586970|gb|ACN58584.1| RT01988p [Drosophila melanogaster]
Length = 1108
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 332 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 385
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 386 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 443
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 444 RASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 501
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 502 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 557
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 558 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 616
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 617 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 667
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 668 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 727
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 728 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 774
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 117/286 (40%), Gaps = 33/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ P + D YQC A
Sbjct: 36 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITIPKDEDRGHYQCFAS 91
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 92 NEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMIQE 149
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 150 SIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV 209
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + P + R L EL + +W+ +G RI D
Sbjct: 210 KQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD- 268
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 269 -RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 310
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 187 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 246
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 247 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 306
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A ++ W HNG I E
Sbjct: 307 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKIS--WIHNGKPI------EQ 358
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 359 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 418
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 419 STVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 448
>gi|198467260|ref|XP_001354326.2| GA14061 [Drosophila pseudoobscura pseudoobscura]
gi|198149415|gb|EAL31379.2| GA14061 [Drosophila pseudoobscura pseudoobscura]
Length = 1309
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 219/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
++ + CEA G P+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 354 EVVFQCEAAGFPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIVNLVKSDTGNY 407
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V L P ++ P T +G NVT+ C APKP+ W
Sbjct: 408 GCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTV--DGRNVTLRCRVTGAPKPQVRWL 465
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++G L V+ +
Sbjct: 466 RATNWL-TGGRYIVQANGDLQILDVTFSDAGQYTCYAENKFGNKSAEGSLTVMEH-TRIT 523
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ + L++ W +G I D E + + + L
Sbjct: 524 QEPQNYEVAAGQSATFRCNEAHDGNLEIEIDWWKDGQPI---DF-EAQPRFVKTNDNSLT 579
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + K +IV+ P P + + A I W
Sbjct: 580 IAKTMELDSGEYTCVARTRLDEATAKANLIVQDVPNAPK-LTGITCQADKAEIMWEPQGD 638
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V + S + PW+ Y F+VIA
Sbjct: 639 NRSPILHYTIQFNTSFTPASWDTAFEKVPNTDF---------SFVVQMSPWANYTFRVIA 689
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G +PS+ S T D P++ P + G G + +L ISW P+P + NAP Y+
Sbjct: 690 FNKIGASQPSAHSESCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPKFQYR 749
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ ++++ + E+ I + P+ + +Y +KV AIN+ G
Sbjct: 750 VSWKRDIPAAAWENKDINEWHQNNIVITDQPT---FVKYHIKVVAINERG 796
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 37/288 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + DR Q T+ +P + D YQC A
Sbjct: 58 CEADGQPEPEYSWIKNGKKFDWQAY----DDRMLRQPGRGTLVITSPKDEDRGHYQCFAS 113
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 114 NEFGTATSNSVYVRKAELN-AFKDEAAKT-VVAVEGEPFMLKCAAPDGFPSPTVNWMMQQ 171
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+RDD+ Y+C+AT+V + G ++L
Sbjct: 172 SIDGSIKSINNSRMTLDPEGNLWFSNVTRDDASDDFYYACSATSVFRSEYKIGNKVLLDV 231
Query: 179 -----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNM 226
S + P + ++ ++L LR EL + +W+ +G RI
Sbjct: 232 KQMGVSASQNKHQPIRQYVSRRQSLALR--GKRMELFCIYGGTPLPQTVWSKDGHRIQWS 289
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
D + + G L I +F D G Y C V + VG + + ++
Sbjct: 290 D--RITQGHY---GKSLIIRQTNFDDNGTYTCDVSNGVGNAQSFSIIL 332
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 110/279 (39%), Gaps = 31/279 (11%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLK------PSFKKRPLES-----ETYAGEGGNVT 108
D Y C A + ++ Y +L +K K +P+ ++ A G +
Sbjct: 205 DDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHQPIRQYVSRRQSLALRGKRME 264
Query: 109 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGM 167
+FC P P+ VW KDG+ I R G +L+I + DD+G Y+C +N G
Sbjct: 265 LFCIYGGTPLPQTVWSKDGHRIQWSDRITQGHYGKSLIIRQTNFDDNGTYTCDVSNGVGN 324
Query: 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+S ++ ++ Y+ P T A + +C A + W HNG I
Sbjct: 325 AQSFSIILEVNAIPYFTVEPDFKTAAEDEEVVFQCEAAG--FPEPKISWIHNGKPI---- 378
Query: 228 LNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL--- 281
E TPN + + I N +D G Y C +++G + + V+ PP +
Sbjct: 379 --EQSTPNPRRTVTDNTIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIEEP 436
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
P + V+ + + T G P + + TNW
Sbjct: 437 PTALSTVDGRNVTLRCRVT-----GAPKPQVRWLRATNW 470
>gi|194891060|ref|XP_001977430.1| GG18259 [Drosophila erecta]
gi|190649079|gb|EDV46357.1| GG18259 [Drosophila erecta]
Length = 1239
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTIAEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RSSNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-ETQPRFVKANDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 797
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 117/286 (40%), Gaps = 33/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ P + D YQC A
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITIPKDEDRGHYQCFAS 114
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 115 NEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMIQE 172
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 173 SIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV 232
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + P + R L EL + +W+ +G RI D
Sbjct: 233 KQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD- 291
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 292 -RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTIAEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRSSNW 471
>gi|24640619|ref|NP_727274.1| neuroglian, isoform B [Drosophila melanogaster]
gi|281360615|ref|NP_001162705.1| neuroglian, isoform E [Drosophila melanogaster]
gi|442615514|ref|NP_001259337.1| neuroglian, isoform I [Drosophila melanogaster]
gi|14286138|sp|P20241.2|NRG_DROME RecName: Full=Neuroglian; Flags: Precursor
gi|22831957|gb|AAN09236.1| neuroglian, isoform B [Drosophila melanogaster]
gi|272506037|gb|ACZ95240.1| neuroglian, isoform E [Drosophila melanogaster]
gi|440216538|gb|AGB95181.1| neuroglian, isoform I [Drosophila melanogaster]
Length = 1302
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 797
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 117/286 (40%), Gaps = 33/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ P + D YQC A
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITIPKDEDRGHYQCFAS 114
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 115 NEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMIQE 172
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 173 SIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV 232
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + P + R L EL + +W+ +G RI D
Sbjct: 233 KQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD- 291
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 292 -RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
>gi|195355114|ref|XP_002044038.1| GM21680 [Drosophila sechellia]
gi|194129291|gb|EDW51334.1| GM21680 [Drosophila sechellia]
Length = 1305
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 797
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 117/286 (40%), Gaps = 33/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ P + D YQC A
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITIPKDEDRGHYQCFAS 114
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 115 NEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMIQE 172
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 173 SIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV 232
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + P + R L EL + +W+ +G RI D
Sbjct: 233 KQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD- 291
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 292 -RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
>gi|358339694|dbj|GAA42413.2| contactin [Clonorchis sinensis]
Length = 958
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/510 (29%), Positives = 222/510 (43%), Gaps = 86/510 (16%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNG----ELLNSETLPLEDQDRYFIQDNVLTIRYLNP 57
D D+T TCEA +P+ ++W+RNG +L++ L D RY + L+
Sbjct: 235 DIGTDITLTCEAAAIPEPEHAWYRNGIAVSDLISQGKL---DPARYSLISVQLS------ 285
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
D +M+ C A N L + SS +LRV++L P+F + P+ GG+V + C PE AP
Sbjct: 286 --DSSMFTCLAWNNLGSEASSGELRVISLAPTFARHPVMPNE-GMVGGSVVMECRPEGAP 342
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
K W + ++ E G+ L +SP++R
Sbjct: 343 SMKTEWLHNAAVLSPSTSIMDPETGSATLQLSPMNR------------------------ 378
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
+ + + L C A + LD+ Y W GV+I D +L+
Sbjct: 379 ---------------VVYENSTVLLPCRASSSPYLDINYAWFFEGVQI-KFDRLDLDARR 422
Query: 236 INIDG---------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
++ G L ITN F ++G Y CV ++ + IST + V GPPG GG+
Sbjct: 423 YDVSQLLRPYGRYFGTLRITNIQFENSGNYSCVAETPLSSISTGGLIRVAGPPGPCGGLM 482
Query: 287 V---VEVHKTSATIQWTDGATNGRPITHYKIIARTN------WNSTWFNVSEHVIGKEVD 337
V + H+ + T WT G T+ PIT + I A W N+S + E
Sbjct: 483 VDPQIGTHRVNVT--WTVGNTHLSPITAFTIEANAKLDPPEKWTVVVSNLS--ITATEEL 538
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
GR+ A +EN L Y +V A N LG G PS PS + T A P + P I GGG
Sbjct: 539 LPLGRRMAFVEN-LASNMAYRLRVRAINALGIGAPSPPSLWFTTLATAPTKMPQNITGGG 597
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIAVVRI 452
GK G L W PL N P+ Y+ R K + E+ L E G + +
Sbjct: 598 GKHGTLVFQWVPLSPVDYNGPDFRYRAHIRAKGNNEYGIYELWNTKPLEGGKFLQYTLTL 657
Query: 453 PSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
YY YE++++A+N +G GP ++ VTI
Sbjct: 658 GENLYYKPYEIRMEAVNKMGAGPITDPVTI 687
>gi|386764048|ref|NP_001245581.1| neuroglian, isoform G [Drosophila melanogaster]
gi|383293281|gb|AFH07295.1| neuroglian, isoform G [Drosophila melanogaster]
Length = 1309
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 797
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 117/286 (40%), Gaps = 33/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ P + D YQC A
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITIPKDEDRGHYQCFAS 114
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 115 NEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMIQE 172
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 173 SIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV 232
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + P + R L EL + +W+ +G RI D
Sbjct: 233 KQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD- 291
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 292 -RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
>gi|6760653|gb|AAC28613.2| neuroglian [Drosophila melanogaster]
Length = 1239
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 797
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 118/288 (40%), Gaps = 37/288 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD---NVLTIRYLNPERDPAMYQCR 67
CEA G P+ YSW +NG+ + + D+ ++ L I + + D YQC
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY-----DKPMLRQPGRGTLVIT-IPKDEDRGHYQCF 112
Query: 68 AKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKK 125
A N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 113 ASNEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMI 170
Query: 126 DGNIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVL 177
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 171 QESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLL 230
Query: 178 H----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNM 226
G S + P + R L EL + +W+ +G RI
Sbjct: 231 DVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWS 290
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
D + + G L I +F DAG Y C V + VG + + ++
Sbjct: 291 D--RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
>gi|6760654|gb|AAC28614.2| neuroglian [Drosophila melanogaster]
Length = 1302
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 797
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 118/288 (40%), Gaps = 37/288 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD---NVLTIRYLNPERDPAMYQCR 67
CEA G P+ YSW +NG+ + + D+ ++ L I + + D YQC
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY-----DKPMLRQPGRGTLVIT-IPKDEDRGHYQCF 112
Query: 68 AKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKK 125
A N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 113 ASNEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMI 170
Query: 126 DGNIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVL 177
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 171 QESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLL 230
Query: 178 H----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNM 226
G S + P + R L EL + +W+ +G RI
Sbjct: 231 DVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWS 290
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
D + + G L I +F DAG Y C V + VG + + ++
Sbjct: 291 D--RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
>gi|17530861|ref|NP_511090.1| neuroglian, isoform A [Drosophila melanogaster]
gi|45554534|ref|NP_996380.1| neuroglian, isoform C [Drosophila melanogaster]
gi|281360613|ref|NP_001162704.1| neuroglian, isoform D [Drosophila melanogaster]
gi|281360617|ref|NP_001162706.1| neuroglian, isoform F [Drosophila melanogaster]
gi|442615512|ref|NP_001259336.1| neuroglian, isoform H [Drosophila melanogaster]
gi|6760659|gb|AAA28728.2| neuroglian precursor [Drosophila melanogaster]
gi|7290947|gb|AAF46387.1| neuroglian, isoform A [Drosophila melanogaster]
gi|16182525|gb|AAL13513.1| GH03573p [Drosophila melanogaster]
gi|45446861|gb|AAS65287.1| neuroglian, isoform C [Drosophila melanogaster]
gi|272506036|gb|ACZ95239.1| neuroglian, isoform D [Drosophila melanogaster]
gi|272506038|gb|ACZ95241.1| neuroglian, isoform F [Drosophila melanogaster]
gi|440216537|gb|AGB95180.1| neuroglian, isoform H [Drosophila melanogaster]
Length = 1239
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 797
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 117/286 (40%), Gaps = 33/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ P + D YQC A
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITIPKDEDRGHYQCFAS 114
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 115 NEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMIQE 172
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 173 SIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV 232
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + P + R L EL + +W+ +G RI D
Sbjct: 233 KQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD- 291
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 292 -RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
>gi|195480086|ref|XP_002101132.1| GE15791 [Drosophila yakuba]
gi|194188656|gb|EDX02240.1| GE15791 [Drosophila yakuba]
Length = 1239
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RSSNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTIELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ S+W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPSSWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGNEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIN+ G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINERG 797
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 119/286 (41%), Gaps = 33/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ P + D YQC A
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITIPKDEDRGHYQCFAS 114
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVW---- 123
N+ T S S +R L +FK P +S+ A EG + C P+ P P W
Sbjct: 115 NEFGTATSNSVYVRKAELN-AFKDEPPKSQE-AVEGEPFMLKCAAPDGFPSPTVNWMIQD 172
Query: 124 KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
DGNI R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 173 SFDGNIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV 232
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + P + R L EL + +W+ +G RI D
Sbjct: 233 KQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSRDGQRIQWSD- 291
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 292 -RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW +DG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSRDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRSSNW 471
>gi|432941979|ref|XP_004082933.1| PREDICTED: contactin-1a-like [Oryzias latipes]
Length = 1040
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 224/494 (45%), Gaps = 33/494 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D ++ T C A G P W+++G + L LT D
Sbjct: 343 VDIGSEHTMRCVASGKPFPFIRWYKDGYMYGKGELKFSS----------LTFD------D 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N +Y++A+LRV+ P+F+ P++ + + G V I C P AAP+P+
Sbjct: 387 SGMYQCIAENFWGIKYANAELRVIACAPTFEFNPVKKQLLGAKDGRVLIECKPRAAPRPR 446
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+WKK ++ + R + +G L I +++D G+Y+C A N G + G L +
Sbjct: 447 FIWKKGEELLFNSTRISVMTDGTLEIRNATKNDEGLYTCFAENDRGKANNSGYLTITEAT 506
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI-NID 239
S P + + LRCSA + +LD+ ++W + R+ + D + N D
Sbjct: 507 S-ITVAPEDSEVKVGDEVILRCSASHDPMLDITFVWAVD-FRVIDFDSEWQHYERVMNQD 564
Query: 240 G-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G G L I NA G Y C ++ V + V G PG PG ++V E+ T +
Sbjct: 565 GTGDLRIKNAQIWHEGRYTCTAQTVVDSDKAYADLKVVGVPGPPGVIRVEEIGDTWVKLV 624
Query: 299 WTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
WT GA + PI +Y I R W W N S + G E + L PW
Sbjct: 625 WTKGAEHNSPILYYTIQTRHFWALNEDDWKNASTSPTFLD-----GTVERAEVTDLYPWL 679
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y+F+++A NE G GE S PS + T P +P+ + G GG+ G++ I+W P+
Sbjct: 680 EYQFRIVATNEYGSGEASIPSLKIKTWDAPPVVSPTDVAGYGGRNGEIIITWTPVQPWFF 739
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
Y + ++ + ++ ET+ + Y + +F E++VK+++ N
Sbjct: 740 YGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHKDTYFFPTEEDFQVREFQVKIKSFNV 799
Query: 471 VGPGPESEVVTIWH 484
G GP S I++
Sbjct: 800 KGDGPYSLTKVIYY 813
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 22/285 (7%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF-IQDNVLTIRYLNPERDPAMYQ 65
++ C A P +Y W R+ N E +E D ++ + L I ++ Y
Sbjct: 58 ISMNCRARANPPASYRWRRD----NWEIKLMEQPDEHYSLVGGNLVITNPIQKKHAGTYV 113
Query: 66 CRAKNQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKP-- 119
C AKN T + + + + P ++ P+ + EG V + C P+A P+
Sbjct: 114 CVAKNIYGTVISKEARVKFGFVEEFPDEEREPVSVK----EGQGVVLLCVPPKAWPEEVT 169
Query: 120 -KFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATN--VHGMDESKGRLI 175
++++ + + + RR + + GNL IS V D+G YSC ++ + SK +
Sbjct: 170 YRWIYNEFPVFLHTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPIIGKSVYSKFTTL 229
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
+ P ++ P I + + S T E + H R +D +L +
Sbjct: 230 IPLPPDDGQKYPADINVKFGDTTAMLASNITLECFALGNPIPHIVWR--KVDSTDLPANH 287
Query: 236 -INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I+ G +L + N + D G YEC +T GK K + VE P
Sbjct: 288 EISESGAVLHLYNVQYEDVGGYECEAINTKGKDWHKAWLYVESAP 332
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 37/259 (14%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQL--KT 74
+VTY W + N + L R F+ + E +D Y C + + K+
Sbjct: 167 EVTYRW-----IYNEFPVFLHTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPIIGKS 221
Query: 75 RYSSAQLRVLTLKPSFKKRPLE-----SETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGN 128
YS + +K P + +T A N+T+ C P P VW+K D
Sbjct: 222 VYSKFTTLIPLPPDDGQKYPADINVKFGDTTAMLASNITLECFALGNPIPHIVWRKVDST 281
Query: 129 IIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL- 186
+ + +I E+G +L + V +D G Y C A N G D K L V P + E +
Sbjct: 282 DLPAN--HEISESGAVLHLYNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETIN 339
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I + +RC A + + W +G G G L+ +
Sbjct: 340 NTQVDIGSEHT--MRCVASGKPFPFIR--WYKDGYMYGK---------------GELKFS 380
Query: 247 NASFADAGEYECVVKSTVG 265
+ +F D+G Y+C+ ++ G
Sbjct: 381 SLTFDDSGMYQCIAENFWG 399
>gi|348526544|ref|XP_003450779.1| PREDICTED: contactin-1a-like [Oreochromis niloticus]
Length = 1042
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 226/493 (45%), Gaps = 33/493 (6%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++ T C A G P W+++G + L LT D
Sbjct: 346 DIGSEHTMRCVASGKPFPFIRWYKDGYMYGKGELKFSS----------LTFA------DS 389
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N +Y++A+LRV+ P+F+ P++ + + G V I C P AAP+P+F
Sbjct: 390 GMYQCIAENYWGIKYANAELRVIACAPTFEFNPVKKQLLGAKDGRVVIECKPRAAPRPRF 449
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ + R I +G+L I +++D G+Y+C A N G S G L + S
Sbjct: 450 TWTKGKELLYNSSRISIMFDGSLEILNATKNDEGVYTCFAENDRGKANSSGYLTITEATS 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + L+C A + +LD+ +IW + I N + + E +N DG
Sbjct: 510 -ITVAPEDTEAKVGDEVILKCEASYDPMLDITFIWAIDFRVIDFNSEWQQYER-VMNEDG 567
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L+I NA G Y C ++ V + + V G PG PG ++V E+ T + W
Sbjct: 568 VGDLKILNAQIWHEGRYTCTAQTVVDSDTAYCDLKVVGVPGPPGVIRVEEIGDTWVKLWW 627
Query: 300 TDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
T GA + PI +Y I R W W N S + G E + L PW
Sbjct: 628 TKGAEHNSPILYYTIQTRHYWALYEDDWRNASTSPTVLD-----GSMERAEVTDLYPWME 682
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F++IA NE G GE S PS + T P +P+ + G GG+ G++ I+W P+
Sbjct: 683 YQFRIIATNEYGSGEASIPSLKIKTWDAPPVVSPTNLAGYGGRNGEIIITWTPVEPWYFY 742
Query: 417 APNIYYKIFWRKKNDTEFQSETLKE---YGNVGIAVVRIPSE--FYYTEYEVKVQAINDV 471
Y + ++ + ++ ET+ + +V IP+E F E++VK+++ N
Sbjct: 743 GKKFGYIVAFKPHDAYDWWYETISDPETRRHVHRDTYFIPTEEDFQVREFQVKIKSFNVK 802
Query: 472 GPGPESEVVTIWH 484
G GP + I++
Sbjct: 803 GDGPYTLTKVIYY 815
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 113/293 (38%), Gaps = 36/293 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF-IQDNVLTIRYLNPERDPAMYQ 65
++ C A P TY W R+ N E +E D ++ + L I ++ Y
Sbjct: 58 ISMNCRARANPPATYRWRRD----NWEIKLMEQPDEHYSLVGGNLVITNPIQKKHAGTYV 113
Query: 66 CRAKNQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKP-- 119
C AKN T + + + L P ++ P+ Y EG + C P+A P+
Sbjct: 114 CVAKNIYGTVISKEARVKFGFLGEFPDEERDPV----YVKEGQGAVLLCVPPKAWPQEVT 169
Query: 120 -KFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
++++ + + + RR + + GNL I+ V D+G YSC ++ + I L
Sbjct: 170 YRWIYNEFPVFLNTDRRRFVSQKTGNLYIAKVEAQDAGNYSCFVSSPVLGKSVFSKFIPL 229
Query: 178 -----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
P+ P T N+ L C A + + + V ++
Sbjct: 230 IPLPPDDGEERKYPADIRVKFPDTTAMLASNITLECFALGNPIPHIVW----RKVDATDL 285
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
N I+ G +L + N + D G YEC +T GK K + VE P
Sbjct: 286 PANH----EISESGAVLHLFNVQYEDVGFYECEAINTKGKDWHKAWLYVESAP 334
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 20/169 (11%)
Query: 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGI 156
+T A N+T+ C P P VW+K + +I E+G +L + V +D G
Sbjct: 252 DTTAMLASNITLECFALGNPIPHIVWRK-VDATDLPANHEISESGAVLHLFNVQYEDVGF 310
Query: 157 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 216
Y C A N G D K L V P + E + + + +RC A + + W
Sbjct: 311 YECEAINTKGKDWHKAWLYVESAPEWAETINNTMKDIGSEH-TMRCVASGKPFPFIR--W 367
Query: 217 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+G G G L+ ++ +FAD+G Y+C+ ++ G
Sbjct: 368 YKDGYMYGK---------------GELKFSSLTFADSGMYQCIAENYWG 401
>gi|427792699|gb|JAA61801.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 1314
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 222/475 (46%), Gaps = 34/475 (7%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERD 60
+ +++ C A G+P+ WF NG +P+E + R ++ +LTI L +RD
Sbjct: 405 EESVSFECAATGIPEPKLQWFVNG-------VPVEKAEPNPRRKVEGPLLTIEALT-KRD 456
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
A+YQC A N + L VL L P+ + P E T A VT+ C AP+P+
Sbjct: 457 TAVYQCNASNPHGYAFRDFYLNVLALPPTITEAP-EQLTLAVVTSRVTLRCRVFGAPRPE 515
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K+ + +GGR ++ ++G+L I + D G Y+C A+N G + G L V G
Sbjct: 516 VKWMKEAQEL-TGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLEV-KGK 573
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ Q P +AA ++ RC+A + L++ W NG + E + +
Sbjct: 574 TLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDP----EADARMVQAGD 629
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L IT D+G Y CV ++ + + T+ V+ P P V++ + A ++W
Sbjct: 630 NSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVKI-DCDGLMALVEWK 688
Query: 301 DGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
PI Y I T+++ TW + ++ + + + PW+ Y F
Sbjct: 689 PTGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT---------KFKVSMSPWANYTF 739
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G PS S + TP D P++ P R+ G G + +L I+W P+P + NAP
Sbjct: 740 RVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPG 799
Query: 420 IYYKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+YK+ W++ + D + S ++++ P+ + Y +KV+A N G
Sbjct: 800 FFYKVLWKRDDIPDATWNSRIIEDWKQNRHVEYGQPT---FKPYRIKVEAHNRRG 851
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 113/296 (38%), Gaps = 45/296 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
CEA G P+ TY W +N N E + R Q T+ + P+ D +YQCRA
Sbjct: 114 CEAQGHPEPTYEWTKN----NKEFDYVSYDKRISQQPRRGTLVFTKPDDVDEGLYQCRAT 169
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAA-PKPKFVWKKD 126
N T S+A V K E+ E Y EG +++ CNP P+P W
Sbjct: 170 NLHGTSVSNA---VFLRKAELNNFAEETTKEVYVVEGDPLSLDCNPPTGYPRPNIFWLIQ 226
Query: 127 GNIIGSGGRRKIFEN-------GNLLISPVSRDDS---GIYSCTATNVHGMDESKGRLIV 176
SG R + + G+L S V D+ +Y+C+AT+V + G I
Sbjct: 227 ---YSSGALRNVNSSRITADPEGDLHFSRVELGDALSDAVYTCSATSVFRREYKIGNKIQ 283
Query: 177 L------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L H P PP + L+L C L ++ W+ G
Sbjct: 284 LKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQIS--WSKRG---A 338
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT-VIVEGPP 279
N N G LEI + SF D G YEC + VG T V VE P
Sbjct: 339 NPTSRRFTYSNY---GKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEAAP 391
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 20/209 (9%)
Query: 62 AMYQCRAKNQLKTRY---SSAQLRVLTLKPSFKKRPLESETY-------AGEGGNVTIFC 111
A+Y C A + + Y + QL+V + K + Y A G + ++C
Sbjct: 262 AVYTCSATSVFRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYC 321
Query: 112 NPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDE 169
P P+ W K G RR + N L I VS +D G Y C A N G+ +
Sbjct: 322 IYGGTPLPQISWSKRG--ANPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQ 379
Query: 170 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ + + Y+ ++P A ++ C+A + + W NGV + + N
Sbjct: 380 THAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATG--IPEPKLQWFVNGVPVEKAEPN 437
Query: 230 ELETPNINIDGGLLEITNASFADAGEYEC 258
P ++G LL I + D Y+C
Sbjct: 438 ----PRRKVEGPLLTIEALTKRDTAVYQC 462
>gi|427797289|gb|JAA64096.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
pulchellus]
Length = 1331
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 222/475 (46%), Gaps = 34/475 (7%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERD 60
+ +++ C A G+P+ WF NG +P+E + R ++ +LTI L +RD
Sbjct: 325 EESVSFECAATGIPEPKLQWFVNG-------VPVEKAEPNPRRKVEGPLLTIEALT-KRD 376
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
A+YQC A N + L VL L P+ + P E T A VT+ C AP+P+
Sbjct: 377 TAVYQCNASNPHGYAFRDFYLNVLALPPTITEAP-EQLTLAVVTSRVTLRCRVFGAPRPE 435
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K+ + +GGR ++ ++G+L I + D G Y+C A+N G + G L V G
Sbjct: 436 VKWMKEAQEL-TGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLEV-KGK 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ Q P +AA ++ RC+A + L++ W NG + E + +
Sbjct: 494 TLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDP----EADARMVQAGD 549
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L IT D+G Y CV ++ + + T+ V+ P P V++ + A ++W
Sbjct: 550 NSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVKI-DCDGLMALVEWK 608
Query: 301 DGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
PI Y I T+++ TW + ++ + + + PW+ Y F
Sbjct: 609 PTGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT---------KFKVSMSPWANYTF 659
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G PS S + TP D P++ P R+ G G + +L I+W P+P + NAP
Sbjct: 660 RVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPG 719
Query: 420 IYYKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+YK+ W++ + D + S ++++ P+ + Y +KV+A N G
Sbjct: 720 FFYKVLWKRDDIPDATWNSRIIEDWKQNRHVEYGQPT---FKPYRIKVEAHNRRG 771
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 113/296 (38%), Gaps = 45/296 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
CEA G P+ TY W +N N E + R Q T+ + P+ D +YQCRA
Sbjct: 34 CEAQGHPEPTYEWTKN----NKEFDYVSYDKRISQQPRRGTLVFTKPDDVDEGLYQCRAT 89
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAA-PKPKFVWKKD 126
N T S+A V K E+ E Y EG +++ CNP P+P W
Sbjct: 90 NLHGTSVSNA---VFLRKAELNNFAEETTKEVYVVEGDPLSLDCNPPTGYPRPNIFWLIQ 146
Query: 127 GNIIGSGGRRKIFEN-------GNLLISPVSRDDS---GIYSCTATNVHGMDESKGRLIV 176
SG R + + G+L S V D+ +Y+C+AT+V + G I
Sbjct: 147 ---YSSGALRNVNSSRITADPEGDLHFSRVELGDALSDAVYTCSATSVFRREYKIGNKIQ 203
Query: 177 L------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L H P PP + L+L C L ++ W+ G
Sbjct: 204 LKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQIS--WSKRG---A 258
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT-VIVEGPP 279
N N G LEI + SF D G YEC + VG T V VE P
Sbjct: 259 NPTSRRFTYSNY---GKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEAAP 311
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 20/209 (9%)
Query: 62 AMYQCRAKNQLKTRY---SSAQLRVLTLKPSFKKRPLESETY-------AGEGGNVTIFC 111
A+Y C A + + Y + QL+V + K + Y A G + ++C
Sbjct: 182 AVYTCSATSVFRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYC 241
Query: 112 NPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDE 169
P P+ W K G RR + N L I VS +D G Y C A N G+ +
Sbjct: 242 IYGGTPLPQISWSKRG--ANPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQ 299
Query: 170 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ + + Y+ ++P A ++ C+A + + W NGV + + N
Sbjct: 300 THAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATG--IPEPKLQWFVNGVPVEKAEPN 357
Query: 230 ELETPNINIDGGLLEITNASFADAGEYEC 258
P ++G LL I + D Y+C
Sbjct: 358 ----PRRKVEGPLLTIEALTKRDTAVYQC 382
>gi|380025831|ref|XP_003696667.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Apis florea]
Length = 1251
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 214/467 (45%), Gaps = 26/467 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + CEA GVP W NG+ + SE P R + N + I L ++D Y C
Sbjct: 350 IEFKCEADGVPVPEIKWIHNGKPI-SEAPP---NPRRKVTSNSIIIEKLT-KKDTXNYGC 404
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL L+P + P + T +G V I C APKP W ++
Sbjct: 405 NATNSLGYVYKDVYVNVLALEPEITQPPTDIATV--DGKTVRITCRVFGAPKPAVKWIRN 462
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + +GGR K ++G+L I V D+GIY+C A+N G E G L+V ++
Sbjct: 463 GQEL-TGGRYKTLDSGDLEIENVIFLDAGIYTCHASNKFGEVEGSGNLVVKEHTKITDE- 520
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AA RC+A T+ L + W NG I D E+E I L IT
Sbjct: 521 PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMIT 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ D+G Y CV + + + + T+IV+ P P + V T A+I WT N
Sbjct: 577 KTTELDSGTYTCVAHTELDEAKAQATLIVQDVPNAPKLISVT-CMTTEASIHWTPMGDNR 635
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PI Y I T + + +S+ + Y + PW+ Y F+V+A N+
Sbjct: 636 APILRYTIQHNTTFTPDTWEISKDDVPATEQTYIVP--------MSPWTNYTFRVLAWNK 687
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G PS S T D PY+ P + G G +L ISW +P+ + NAP Y++++
Sbjct: 688 IGTSLPSPHSDVCTTLQDVPYKNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYRVYY 747
Query: 427 RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
R+ E + E + ++ + V P+ Y Y++KV AIN+ G
Sbjct: 748 RRDIPGEKWTIEDITDWKKNSLVVDNQPT---YQRYKIKVVAINEKG 791
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 112/287 (39%), Gaps = 36/287 (12%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N CEA G P Y W +NG+ P D DR Q T+ P + D
Sbjct: 45 ENDKPFLIECEAEGEPAPRYRWIKNGKNFE---WPAYD-DRISQQPGRGTLVISRPRDED 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCN-PEAAPK 118
YQC A+N+ S++ SFK + P+ + A EG + C P+ PK
Sbjct: 101 LGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLD--ANEGQPFKLTCQPPDGFPK 158
Query: 119 PKFVWKKDGNIIG----SGGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESK 171
P W G + R + GNL S V+R+D+ Y+C AT+V +
Sbjct: 159 PNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVFRNEYKL 218
Query: 172 GRLIVLH------GPSYYEQLPPKITIAAHRNLQLR-------CSAHTEELLDVAYIWTH 218
G ++L+ S + P K ++ + LR C L + +W+
Sbjct: 219 GNRVLLNVISSGISASQNKHDPVKQYVSRKNEVALRGKKIELYCIYGGTPLPQI--VWSK 276
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
NG I D + N G L I + +F D G Y C + VG
Sbjct: 277 NGEVIRTND--RIMQGNY---GKSLIIKHVNFKDEGTYTCEASNGVG 318
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 84/224 (37%), Gaps = 18/224 (8%)
Query: 56 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS-----------FKKRPLESETYAGEG 104
N D Y C A + + Y +L + S K+ A G
Sbjct: 196 NDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKHDPVKQYVSRKNEVALRG 255
Query: 105 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATN 163
+ ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C A+N
Sbjct: 256 KKIELYCIYGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKDEGTYTCEASN 315
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G +S + + Y+ P I A ++ +C A + ++ W HNG I
Sbjct: 316 GVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETIEFKCEADGVPVPEIK--WIHNGKPI 373
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P + + I + D Y C +++G +
Sbjct: 374 SEAPPN----PRRKVTSNSIIIEKLTKKDTXNYGCNATNSLGYV 413
>gi|195173863|ref|XP_002027704.1| GL22653 [Drosophila persimilis]
gi|194114650|gb|EDW36693.1| GL22653 [Drosophila persimilis]
Length = 1309
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
++ + CEA G P+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 354 EVVFQCEAAGFPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIVNLVKSDTGNY 407
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V L P ++ P T +G NVT+ C APKP+ W
Sbjct: 408 GCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTV--DGRNVTLRCRVTGAPKPQVRWL 465
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++G L V+ +
Sbjct: 466 RATNWL-TGGRYIVQANGDLQILDVTFSDAGQYTCYAENKFGNKSAEGSLTVMEH-TRIT 523
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ + L++ W +G I D E + + + L
Sbjct: 524 QEPQNYEVAAGQSATFRCNEAHDGNLEIEIDWWKDGQPI---DF-EAQPRFVKTNDNSLT 579
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+G+Y CV + + + + K +IV+ P P + + A I W
Sbjct: 580 IAKTMELDSGKYSCVACTRLDQATAKANLIVQDVPNAPK-LTGITCQADKAEIMWEPQGD 638
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V + S + PW+ Y F+VIA
Sbjct: 639 NRSPILHYTIQFNTSFTPASWDTAFEKVPNTDF---------SFVVQMSPWANYTFRVIA 689
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G +PS+ S T D P++ P + G G + +L ISW P+P + NAP Y+
Sbjct: 690 FNKIGASQPSAHSESCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPKFQYR 749
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ ++++ + E+ I + P+ + +Y +KV AIN+ G
Sbjct: 750 VSWKRDIPAAAWENKDINEWHQNNIVITDQPT---FVKYHIKVVAINERG 796
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 37/288 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + DR Q T+ +P + D YQC A
Sbjct: 58 CEADGQPEPEYSWIKNGKKFDWQAY----DDRMLRQPGRGTLVITSPKDEDRGHYQCFAS 113
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 114 NEFGTATSNSVYVRKAELN-AFKDEAAKT-VVAVEGEPFMLKCAAPDGFPSPTVNWMMQQ 171
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+RDD+ Y+C+AT+V + G ++L
Sbjct: 172 SIDGSIKSINNSRMTLDPEGNLWFSNVTRDDASDDFYYACSATSVFRSEYKIGNKVLLDV 231
Query: 179 -----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNM 226
S + P + ++ ++L LR EL + +W+ +G RI
Sbjct: 232 KQMGVSASQNKHQPIRQYVSRRQSLALR--GKRMELFCIYGGTPLPQTVWSKDGHRIQWS 289
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
D + + G L I +F D G Y C V + VG + + ++
Sbjct: 290 D--RITQGHY---GKSLIIRQTNFDDNGTYTCDVSNGVGNAQSFSIIL 332
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 31/279 (11%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLK------PSFKKRPLES-----ETYAGEGGNVT 108
D Y C A + ++ Y +L +K K +P+ ++ A G +
Sbjct: 205 DDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHQPIRQYVSRRQSLALRGKRME 264
Query: 109 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGM 167
+FC P P+ VW KDG+ I R G +L+I + DD+G Y+C +N G
Sbjct: 265 LFCIYGGTPLPQTVWSKDGHRIQWSDRITQGHYGKSLIIRQTNFDDNGTYTCDVSNGVGN 324
Query: 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+S ++ ++ Y+ P + +C A + W HNG I
Sbjct: 325 AQSFSIILEVNAIPYFTVEPDSRRPPEDEEVVFQCEAAG--FPEPKISWIHNGKPI---- 378
Query: 228 LNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL--- 281
E TPN + + I N +D G Y C +++G + + V+ PP +
Sbjct: 379 --EQSTPNPRRTVTDNTIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQALPPEIEEP 436
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
P + V+ + + T G P + + TNW
Sbjct: 437 PTALSTVDGRNVTLRCRVT-----GAPKPQVRWLRATNW 470
>gi|328788305|ref|XP_395296.3| PREDICTED: neuroglian [Apis mellifera]
Length = 1251
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 216/471 (45%), Gaps = 34/471 (7%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + CEA GVP W NG+ + SE P R + N + I L ++D Y C
Sbjct: 350 IEFKCEADGVPVPEIKWIHNGKPI-SEAPP---NPRRKVTSNSIIIEKLT-KKDTGNYGC 404
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL L+P + P + T +G V I C APKP W ++
Sbjct: 405 NATNSLGYVYKDVYVNVLALEPEITQPPTDIATV--DGKTVRITCRVFGAPKPAVKWIRN 462
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + +GGR K ++G+L I V D+GIY+C A+N G E G L+V ++
Sbjct: 463 GQEL-TGGRYKTLDSGDLEIENVIFLDAGIYTCHASNKFGEVEGSGNLVVKEHTRITDE- 520
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AA RC+A T+ L + W NG I D E+E I L IT
Sbjct: 521 PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMIT 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ D+G Y C+ + + + + T+IV+ P P + + T A+I WT N
Sbjct: 577 KTTELDSGTYTCIAHTELDEAKAQATLIVQDVPNAPKLISIT-CMATEASIHWTPMGDNR 635
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV----PWSTYEFKVI 362
PI Y I T + + +S+ + +IE V PW+ Y F+V+
Sbjct: 636 APILRYTIQHNTTFTPDTWEISKDDV------------PAIEQTYVVPMSPWTNYTFRVL 683
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G PS S T D PY+ P + G G +L ISW +P+ + NAP Y
Sbjct: 684 AWNKIGTSLPSPHSDVCTTLQDVPYKNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMY 743
Query: 423 KIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+I++R+ E + E + ++ + V P+ Y Y++KV AIN+ G
Sbjct: 744 RIYYRRDIPGEKWTIEDITDWKKNNLVVDNQPT---YQRYKIKVVAINEKG 791
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 18/224 (8%)
Query: 56 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS-----------FKKRPLESETYAGEG 104
N D Y C A + + Y +L + S K+ A G
Sbjct: 196 NDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKHDPVKQYVSRKNEVALRG 255
Query: 105 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATN 163
+ ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C A+N
Sbjct: 256 KKIELYCIYGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKDKGTYTCEASN 315
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G +S + + Y+ P I A ++ +C A + ++ W HNG I
Sbjct: 316 GVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETIEFKCEADGVPVPEIK--WIHNGKPI 373
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P + + I + D G Y C +++G +
Sbjct: 374 SEAPPN----PRRKVTSNSIIIEKLTKKDTGNYGCNATNSLGYV 413
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 112/287 (39%), Gaps = 36/287 (12%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N CEA G P Y W +NG+ P D DR Q T+ P + D
Sbjct: 45 ENDKPFLIECEAEGEPAPRYRWIKNGKNFE---WPAYD-DRISQQPGRGTLVISRPRDED 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCN-PEAAPK 118
YQC A+N+ S++ SFK + P+ + A EG + C P+ PK
Sbjct: 101 LGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLD--ANEGQPFKLTCQPPDGFPK 158
Query: 119 PKFVWKKDGNIIG----SGGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESK 171
P W G + R + GNL S V+R+D+ Y+C AT+V +
Sbjct: 159 PNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVFRNEYKL 218
Query: 172 GRLIVLH------GPSYYEQLPPKITIAAHRNLQLR-------CSAHTEELLDVAYIWTH 218
G ++L+ S + P K ++ + LR C L + +W+
Sbjct: 219 GNRVLLNVISSGISASQNKHDPVKQYVSRKNEVALRGKKIELYCIYGGTPLPQI--VWSK 276
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
NG I D + N G L I + +F D G Y C + VG
Sbjct: 277 NGEVIRTND--RIMQGNY---GKSLIIKHVNFKDKGTYTCEASNGVG 318
>gi|195448218|ref|XP_002071561.1| GK25863 [Drosophila willistoni]
gi|194167646|gb|EDW82547.1| GK25863 [Drosophila willistoni]
Length = 1304
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 218/469 (46%), Gaps = 28/469 (5%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++ + C+A G P+ T W NG+ + +++ P R + +N + I L + D Y
Sbjct: 354 EVVFNCKAAGFPEPTIQWIHNGKPI-AQSPP---NPRRTVTNNFIKIVQLT-KADTGNYG 408
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N L Y L VL L P ++ P + T +G N+T+ C APKP+ W
Sbjct: 409 CNATNSLGYVYKDVYLNVLALPPEIQEAPRDESTV--DGRNITMRCRVFGAPKPQVKWLH 466
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G +GGR + NG+L I V+ D+G Y+C A N G ++G L V + Q
Sbjct: 467 -GRKWLTGGRYNVLPNGDLSIDAVTFPDAGKYTCFAINKFGNKTAEGSLEVKEH-TRITQ 524
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P +AA ++ RC+ ++ L++ W +G I D + E + + L I
Sbjct: 525 EPQNYEVAAGQSATFRCNEAHDDTLELEIEWWKDGQAI---DF-DAEARFVKTNDNSLTI 580
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
D+GEY CV ++ + + + K +IV+ P P + + A I+W N
Sbjct: 581 AKTMELDSGEYTCVARTKLDEATAKANLIVQDVPNAPR-LLGISCQADKAEIRWEPQGDN 639
Query: 306 GRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI HY I T++ ++W E V + S + PW+ Y F+VIA
Sbjct: 640 RSPILHYTIQFNTSFTPASWDTAYEKVPSTDF---------SFVVQMSPWANYTFRVIAF 690
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G PS S T P++ P + G G + +L ISW P+P + N P +Y++
Sbjct: 691 NKIGPSPPSGHSEACTTQPAVPFKNPDNVVGQGTEPTNLVISWTPMPEIEHNGPKFHYRV 750
Query: 425 FWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+W++ +QS+ + ++ I + P+ + +Y +KV AIN G
Sbjct: 751 YWKRDIAAAPWQSKEIDDWHQNNIVITDQPT---FVKYHIKVAAINGNG 796
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 22/233 (9%)
Query: 51 TIRYLNPERDPA----MYQCRAKNQLKTRYSSAQLRVLTLK------PSFKKRP-----L 95
T+ + N RD A Y C A + + Y +L +K K +P
Sbjct: 192 TLWFSNLTRDDASDDFYYACSATSVFRNEYKIGNKVLLDVKQMGVSASQNKHQPKRQYVT 251
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDS 154
A G V ++C P P+ VW KDG+ I R G +L+I +RDD
Sbjct: 252 RKNEVALRGKRVELYCIFGGTPLPQTVWSKDGHPIQWSDRITQGHYGKSLVIRQANRDDE 311
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y+C +N G +S + ++ Y+ + P A + C A +
Sbjct: 312 GAYTCDVSNGVGNAQSYSINLKINAIPYFTEEPDFQNAAEDEEVVFNCKAAG--FPEPTI 369
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
W HNG I N P + ++I + AD G Y C +++G +
Sbjct: 370 QWIHNGKPIAQSPPN----PRRTVTNNFIKIVQLTKADTGNYGCNATNSLGYV 418
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ +P + D YQC A
Sbjct: 58 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITSPKDEDLGQYQCFAS 113
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKKDGN 128
N+ S++ +FK ++ A EG ++ C P+ PKP W +
Sbjct: 114 NEFGIATSNSVFVRKAELNAFKDEAAKT-VEAVEGEPFSLQCEAPDGWPKPTVNWLIQQS 172
Query: 129 IIG-----SGGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVL 177
I G + R + G L S ++RDD+ Y+C+AT+V + G ++L
Sbjct: 173 IDGGIKSINNSRMTLDPEGTLWFSNLTRDDASDDFYYACSATSVFRNEYKIGNKVLL 229
>gi|149036841|gb|EDL91459.1| rCG56294, isoform CRA_b [Rattus norvegicus]
Length = 966
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 213/497 (42%), Gaps = 73/497 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG+ L E +R I++ LTI LN D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENGALTIANLNVS-DSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+VL P F + P++ G V + C P A+P+ WKK
Sbjct: 386 CIAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
++ R + +G L I V++ D+GIY+C A N G +L+V P+
Sbjct: 446 GDTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTE-PTRIIL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + +A ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV P + G + V + + +++
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRVPEAIDGKTRTATVVELNPWVEY----- 618
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
++++A
Sbjct: 619 ------EFRVVA-----------------------------------------------S 625
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y +
Sbjct: 626 NKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVV 685
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + + N V R S ++ YEVKV N+ G GP S V T++
Sbjct: 686 AFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFS 744
Query: 484 --HDPLVIISYVCQGDL 498
+P V S++ L
Sbjct: 745 AEEEPTVAPSHISAHSL 761
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSL-----DHRYKLNGGNLIV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK R + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKSR-MRSRVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+V+ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R M
Sbjct: 217 RSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQI------NWRRSDGMPFP 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+++ N G+LEI N D G YEC+ +++ GK
Sbjct: 271 TKIKLRKFN---GVLEIPNFQQEDTGSYECIAENSRGK 305
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIKLRKF-NGVLEIPNFQQEDTGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P Y+ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWVQLLKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G D LE I I+ G L I N + +D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G +I S R
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ ++++ + +
Sbjct: 81 GGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWVFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>gi|326928135|ref|XP_003210238.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Meleagris gallopavo]
Length = 1225
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 226/483 (46%), Gaps = 36/483 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L CEA G P+ T W NG ++S T R I D L++ L + D A+Y
Sbjct: 364 NLLLLCEAIGNPEPTIQWKLNGMPIDSRTF------RGRISDGELSLTNLQLQ-DTAVYH 416
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWK 124
C A N+ T +SA + VL + P + E YA G + + C A+P W
Sbjct: 417 CEASNKHGTLLASANVNVLNIAPLILTS--DGENYAAVVGYSAFLHCEIFASPAADVRWT 474
Query: 125 KDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KD +I S R ++ +NG L I ++DSG Y+C A N G L +
Sbjct: 475 KDDSIEPLSALRYELNKNGTLEIKETKKEDSGSYACWAANSVGKRAITANLDIRDATKIV 534
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGG 241
P + ++ L+C + + L ++ W +G + ++ ++ I +D
Sbjct: 535 -ITPKNPQVLKSHSILLKCQSEYDSHLKNSFKLSWRKDGYE---LSVSSIQDSRIIMDMD 590
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I+N D G Y CV +++ ++ KT +IV P P +Q+ E S + W
Sbjct: 591 TLFISNVMLEDQGIYTCVASTSLDSVTAKTRLIVLDVPDPPEDLQLSEHQNRSVRLSWKA 650
Query: 302 GATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
GA + P+ I + W W +E+ R G ++ + L P++ Y+F
Sbjct: 651 GANHNSPVNESIIEFEESRWEPGRW---------QELARAPGNTTTTLLS-LAPYTNYQF 700
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+VI+ N +G +PS PS +Y TP P + P I + ++ + WEPL ++N P
Sbjct: 701 RVISVNAVGRSQPSKPSLRYVTPPAAPDKNPENIRVEASEPNEMVMKWEPLKSMERNGPG 760
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR++ +TE+ ET+K++ + + P+ + YE+KVQAIN++G GPE
Sbjct: 761 LEYKVSWRQRGVETEWNEETVKKH---SLTLRNTPT---FVPYEIKVQAINNLGAGPEPN 814
Query: 479 VVT 481
+ T
Sbjct: 815 ITT 817
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 186/510 (36%), Gaps = 83/510 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
CE F P W ++ + L RY + N L I+ E D Y C A
Sbjct: 461 CEIFASPAADVRWTKDDSIEPLSAL------RYELNKNGTLEIKETKKE-DSGSYACWAA 513
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPE----AAPKPK 120
N + R +A L + + + P K P ++++ + + C E K
Sbjct: 514 NSVGKRAITANLDIRDATKIVITP---KNPQVLKSHS-----ILLKCQSEYDSHLKNSFK 565
Query: 121 FVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W+KDG ++ R I + L IS V +D GIY+C A+ +K RLIVL
Sbjct: 566 LSWRKDGYELSVSSIQDSRIIMDMDTLFISNVMLEDQGIYTCVASTSLDSVTAKTRLIVL 625
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCS----AHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P P + ++ H+N +R S A+ ++ + I R EL
Sbjct: 626 DVP----DPPEDLQLSEHQNRSVRLSWKAGANHNSPVNESIIEFEES-RWEPGRWQELAR 680
Query: 234 PNINIDGGLLEI---TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
N LL + TN F V +S K S + P P ++V
Sbjct: 681 APGNTTTTLLSLAPYTNYQFR-VISVNAVGRSQPSKPSLRYVTPPAAPDKNPENIRVEAS 739
Query: 291 HKTSATIQWTDGATNGR--PITHYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTGRK 343
++W + R P YK+ R T WN V +H + T R
Sbjct: 740 EPNEMVMKWEPLKSMERNGPGLEYKVSWRQRGVETEWNEE--TVKKHSL-------TLRN 790
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGGGGGKI 400
+ VP YE KV A N LG G P P T D P APS +
Sbjct: 791 TPT----FVP---YEIKVQAINNLGAG----PEPNITTGYSGEDIPDAAPSGVSVDIVNS 839
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFW--------RKKNDTEFQSETLKEYGNVGIAVVRI 452
+ + W +PR++ YK+ W K++ E T N G+ I
Sbjct: 840 TLVKVFWFGIPRDRVRGHLRGYKVSWWKTKSMLDGKRHHPEKHFLTFVGDRNYGM----I 895
Query: 453 PSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
P ++E+ + V A N G GPES V
Sbjct: 896 PGLDPFSEFRLTVLAYNSRGDGPESAPVVF 925
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 111/297 (37%), Gaps = 37/297 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P SW + E L + P+ D+ VL I ++ D YQC
Sbjct: 275 LQLECIAEGLPTPHLSWVKVTENLPKDK-PVTDK-----FGKVLKIENVSAA-DEGTYQC 327
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N + + V P + K P GE N+ + C P+P WK +
Sbjct: 328 TASNPVGRAKHEFHVHVEE-PPRWIKEPRGGVYSLGE--NLLLLCEAIGNPEPTIQWKLN 384
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G I S R +G L ++ + D+ +Y C A+N HG + + VL+ +
Sbjct: 385 GMPIDSRTFRGRISDGELSLTNLQLQDTAVYHCEASNKHGTLLASANVNVLN-------I 437
Query: 187 PPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P I + N L C DV WT + + L +
Sbjct: 438 APLILTSDGENYAAVVGYSAFLHCEIFASPAADVR--WTKDD------SIEPLSALRYEL 489
Query: 239 D-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGVQVVEVH 291
+ G LEI D+G Y C ++VGK + + + + P QV++ H
Sbjct: 490 NKNGTLEIKETKKEDSGSYACWAANSVGKRAITANLDIRDATKIVITPKNPQVLKSH 546
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 115/317 (36%), Gaps = 63/317 (19%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG---ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+ T CEA G P T++W ++G +LL+ + + F+ N I
Sbjct: 52 NFTIKCEASGNPQPTFNWTKDGKPFDLLSDPRITTRNNSGTFVIQNHGIITNFQ-----G 106
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKP 119
Y+C A N L T S ++ P F K PL+ E G +V + CNP P
Sbjct: 107 KYRCYASNVLGTAMSKEIELIVPSVPKFPKEKIEPLDVE----HGDSVILHCNPPKGIPP 162
Query: 120 KFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA--------------- 161
++ D I R + G+L + V +DS Y C A
Sbjct: 163 LHIYWMNIDLQHIPQDERVSMSLKGDLYFANVEENDSRSDYCCFAAFPKLRTIVQKMPMT 222
Query: 162 -------------------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
T + + E K +L++ P +T+ LQL C
Sbjct: 223 LKVSRFKHANDSGSPNAAVTKANFIKERKPKLLI---PPESAGSSSSVTVIKGGVLQLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A ++++ + + P + G +L+I N S AD G Y+C +
Sbjct: 280 IAEGLPTPHLSWVKVTENL--------PKDKPVTDKFGKVLKIENVSAADEGTYQCTASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
VG+ + V VE PP
Sbjct: 332 PVGRAKHEFHVHVEEPP 348
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 65/180 (36%), Gaps = 23/180 (12%)
Query: 103 EGGNVTIFCNPEAAPKPKFVW-------KKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
+GG + + C E P P W KD + G+ EN VS D G
Sbjct: 271 KGGVLQLECIAEGLPTPHLSWVKVTENLPKDKPVTDKFGKVLKIEN-------VSAADEG 323
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y CTA+N G + + + V P + ++ P + NL L C A +
Sbjct: 324 TYQCTASNPVGRAKHEFHVHVEEPPRWIKE-PRGGVYSLGENLLLLCEAIGNP--EPTIQ 380
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
W NG+ I + T I G L +TN D Y C + G + V V
Sbjct: 381 WKLNGMPIDS------RTFRGRISDGELSLTNLQLQDTAVYHCEASNKHGTLLASANVNV 434
>gi|432953128|ref|XP_004085301.1| PREDICTED: neurofascin-like, partial [Oryzias latipes]
Length = 1072
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 213/477 (44%), Gaps = 41/477 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C + GVP T SWF NG+ P+ED Q + + +T+R + E + A+YQC
Sbjct: 346 CRSDGVPRPTISWFMNGD-------PIEDAMQQSNRLVAGDTITLRSVTAE-NTAVYQCN 397
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
A NQ ++A + VL P P EG + C +P P W K G
Sbjct: 398 ASNQYGYLLANAFVNVLHSTPRIIG-PRNEVVKVIEGSRTFLDCRFFGSPVPDLRWSKYG 456
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
G R K NG L + + D G Y C +N+ G DE++ R+ V P P
Sbjct: 457 QGNLEGTRFKTHSNGTLEVKRIQLQDEGTYVCVISNIAGRDENQVRVEVKE-PIVIVTKP 515
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + +++L C+ + W N ++ +++D L IT+
Sbjct: 516 QSMKVIRGSDVRLECAVKADATTPFTTSWIKNKKQVTF-------GWRVSLDESNLVITD 568
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
+ D G Y CV K+ + + S ++V P P +++ + + S + W G +N
Sbjct: 569 VNRGDEGNYTCVFKNELDQKSASAHLLVMDRPNPPTNLELSDPFERSVRLSWVPGDSNHS 628
Query: 308 PITHYKI-IARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
PIT Y + +W W N+S Y G + I + L P++ YEF+VIA N
Sbjct: 629 PITDYLVQYDDDDWLPGKWRNLST---------YPGNLNSVILH-LTPFTYYEFRVIAIN 678
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
+G PS S ++ T P P + G G ++ ISWEPL + N P++ Y ++
Sbjct: 679 AIGASRPSRSSARFQTSGAPPDVIPKNVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVW 738
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
WR+++ E E+ N +R I +T YE+KVQA+ND G GPES VV
Sbjct: 739 WRRRDSRE-------EWKNATTKWLRYYIYDADTFTPYEIKVQAVNDFGLGPESPVV 788
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 130/298 (43%), Gaps = 33/298 (11%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PER 59
+D + + CEA G P T+SW R+G+ N + + Q + L I N PE+
Sbjct: 42 VDPKDTMVIECEAIGNPHPTFSWRRDGKYFN---VARDSQVSMRRRSGTLEIYARNNPEK 98
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPK 118
A+YQC A NQ + Y+ + P + + PLE + G + + C +P PK
Sbjct: 99 YEAVYQCIASNQYGSAYTHKINLQMYRPPVWPREPLEPVVISA-GLPLVLPCESPAGPPK 157
Query: 119 PKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATNVHG---MDESKGR 173
P+ W + R + NG+L S V +DS + Y C A H ++
Sbjct: 158 PETYWMSSSMQPVRQDRRVSMGINGDLYFSNVLFNDSVVDYCCNARFPHKNAIQQKTPVV 217
Query: 174 LIVLHGPSYYEQLP----PKITIAAHRNLQ-----LRCSAHTEELLDVAYIWTHNGVRIG 224
+ VL S E P PK + ++ LQ L C A +A WT +G
Sbjct: 218 VKVLSTRSIAEAAPTWLSPKGSSSSKLVLQGEELLLECIAAGVPTPHIA--WTKDG---- 271
Query: 225 NMDLNELE-TPNINIDG--GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+EL TP++ I +++I A+F DAGEY C + +G I +VIV+ P
Sbjct: 272 ----DELAVTPSMKIKNFNKMIQIPKAAFEDAGEYTCSATNKIGYIEHTISVIVKAAP 325
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 13/197 (6%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTA 161
+G + + C P P W KDG+ + KI N + I + +D+G Y+C+A
Sbjct: 247 QGEELLLECIAAGVPTPHIAWTKDGDELAVTPSMKIKNFNKMIQIPKAAFEDAGEYTCSA 306
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
TN G E +IV P + E+ P + +A +L C + ++ W NG
Sbjct: 307 TNKIGYIEHTISVIVKAAPFWVEK-PTNLILAPEETGRLVCRSDGVPRPTIS--WFMNGD 363
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
I + ++ N + G + + + + + Y+C + G + V ++ P
Sbjct: 364 PIEDA----MQQSNRLVAGDTITLRSVTAENTAVYQCNASNQYGYLLANAFVNVLHSTPR 419
Query: 281 LPGG----VQVVEVHKT 293
+ G V+V+E +T
Sbjct: 420 IIGPRNEVVKVIEGSRT 436
>gi|363738738|ref|XP_414434.3| PREDICTED: neural cell adhesion molecule L1-like protein [Gallus
gallus]
Length = 1213
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 227/483 (46%), Gaps = 36/483 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L CEA G P+ T W NG ++S T R I D L++ L + D A+Y
Sbjct: 352 NLLLLCEAIGNPEPTIQWKLNGMPIDSRTF------RGRISDGELSLINLQLQ-DTAVYH 404
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWK 124
C A N+ T +SA + VL + P + E YA G + + C A+P W
Sbjct: 405 CEASNKHGTLLASANVNVLNIAPLILTS--DGENYAAVVGYSAFLHCKIFASPAADVRWT 462
Query: 125 KDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KD +I S R ++ +NG L I ++DSG Y+C A N G L +
Sbjct: 463 KDDSIEPLSALRYELNKNGTLEIKETKKEDSGSYACWAANSVGKRAITANLDIRDATKIV 522
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGG 241
P + ++ L+C + + L ++ W +G + ++ ++ I +D
Sbjct: 523 -ITPKNPQVLKSHSILLKCQSEYDSHLKNSFKLSWRKDGYE---LSVSSIQDSRIVMDMD 578
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I+N D G Y CV +++ ++ KT +IV P P +Q+ E S + W
Sbjct: 579 TLFISNVMLEDQGVYTCVASTSLDSVTAKTRLIVLDVPDPPEDLQLSEHQNRSVRLSWKA 638
Query: 302 GATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
GA++ P+ I + W W +E+ R G ++ + L P++ Y+F
Sbjct: 639 GASHNSPVNESIIEFEESRWEPGRW---------QELARAPGNTTTTLLS-LAPYTNYQF 688
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V++ N +G +PS PS +Y TP P + P I + ++ + WEPL ++N P
Sbjct: 689 RVVSVNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEASEPNEMVMKWEPLKPMERNGPG 748
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR++ +TE+ ET+K++ + + P+ + YE+KVQAIN++G GPE
Sbjct: 749 LEYKVSWRQQGVETEWNEETVKKH---SLTLRNTPT---FVPYEIKVQAINNLGAGPEPN 802
Query: 479 VVT 481
+ T
Sbjct: 803 ITT 805
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 184/506 (36%), Gaps = 75/506 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
C+ F P W ++ + L RY + N L I+ E D Y C A
Sbjct: 449 CKIFASPAADVRWTKDDSIEPLSAL------RYELNKNGTLEIKETKKE-DSGSYACWAA 501
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPE----AAPKPK 120
N + R +A L + + + P K P ++++ + + C E K
Sbjct: 502 NSVGKRAITANLDIRDATKIVITP---KNPQVLKSHS-----ILLKCQSEYDSHLKNSFK 553
Query: 121 FVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W+KDG ++ R + + L IS V +D G+Y+C A+ +K RLIVL
Sbjct: 554 LSWRKDGYELSVSSIQDSRIVMDMDTLFISNVMLEDQGVYTCVASTSLDSVTAKTRLIVL 613
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGNMDLNELE 232
P P + ++ H+N +R S +H + + + + G EL
Sbjct: 614 DVP----DPPEDLQLSEHQNRSVRLSWKAGASHNSPVNESIIEFEESRWEPGRW--QELA 667
Query: 233 TPNINIDGGLLEI---TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
N LL + TN F V +S K S + P P ++V
Sbjct: 668 RAPGNTTTTLLSLAPYTNYQFRVVS-VNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEA 726
Query: 290 VHKTSATIQWTDGATNGR--PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++W R P YK+ R T +N E + K T R +
Sbjct: 727 SEPNEMVMKWEPLKPMERNGPGLEYKVSWRQQGVETEWN--EETVKKH--SLTLRNTPT- 781
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGGGGGKIGDLS 404
VP YE KV A N LG G P P T D P APS + +
Sbjct: 782 ---FVP---YEIKVQAINNLGAG----PEPNITTGYSGEDIPDAAPSGVSVDIVNSTLVK 831
Query: 405 ISWEPLPREKQNAPNIYYKIFW--------RKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ W +PR++ YK+ W K++ E T N G+ IP
Sbjct: 832 VFWFGIPRDRVRGHLRGYKVSWWKTKSMLDGKRHHPEKHFLTFVGDRNYGM----IPGLE 887
Query: 457 YYTEYEVKVQAINDVGPGPESEVVTI 482
++E+ + V A N G GPES V
Sbjct: 888 PFSEFRLAVLAYNSKGDGPESAPVVF 913
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 117/318 (36%), Gaps = 65/318 (20%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGE----LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ T CEA G P T++W ++G+ L + + + + IQ++ + +
Sbjct: 40 NFTIKCEASGNPQPTFNWTKDGKPFDLLSDPRIISRNNSGTFVIQNHGIITNF------Q 93
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A N L T S ++ P F K PL+ E G +V + CNP
Sbjct: 94 GKYRCYASNVLGTAMSKEIELIVPSVPKFPKEKIEPLDVE----HGDSVILHCNPPKGIP 149
Query: 119 PKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA-------------- 161
P ++ D I R + G+L + V +DS Y C A
Sbjct: 150 PLHIYWMNIDLQHIPQDERVSMSLKGDLYFANVEENDSRSDYCCFAAFPKLRTIVQKMPM 209
Query: 162 --------------------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 201
T + + E K +L++ P +T+ LQL
Sbjct: 210 TLKVSRFKHANDSGSPNAAVTKANFIKERKPKLLI---PPESAGSSSSVTVIKGGVLQLE 266
Query: 202 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
C A ++++ + + P + G +L+I N S AD G Y+C
Sbjct: 267 CIAEGLPTPHLSWVKVTGSL--------PKDKPVTDKFGKVLKIENVSAADEGTYQCTAS 318
Query: 262 STVGKISTKTTVIVEGPP 279
+ VG+ + V VE PP
Sbjct: 319 NPVGRAKHEFHVHVEEPP 336
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 100/270 (37%), Gaps = 36/270 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L C A G+P SW + G L + P+ D+ VL I ++ D YQ
Sbjct: 263 LQLECIAEGLPTPHLSWVKVTGSLPKDK--PVTDK-----FGKVLKIENVS-AADEGTYQ 314
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N + + V P + K P GE N+ + C P+P WK
Sbjct: 315 CTASNPVGRAKHEFHVHVEE-PPRWIKEPRGGVYSLGE--NLLLLCEAIGNPEPTIQWKL 371
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+G I S R +G L + + D+ +Y C A+N HG + + VL+
Sbjct: 372 NGMPIDSRTFRGRISDGELSLINLQLQDTAVYHCEASNKHGTLLASANVNVLN------- 424
Query: 186 LPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+ P I + N L C DV WT + + L
Sbjct: 425 IAPLILTSDGENYAAVVGYSAFLHCKIFASPAADVR--WTKDD------SIEPLSALRYE 476
Query: 238 ID-GGLLEITNASFADAGEYECVVKSTVGK 266
++ G LEI D+G Y C ++VGK
Sbjct: 477 LNKNGTLEIKETKKEDSGSYACWAANSVGK 506
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 15/176 (8%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLL-ISPVSRDDSGIYSC 159
+GG + + C E P P W K + GS + K + G +L I VS D G Y C
Sbjct: 259 KGGVLQLECIAEGLPTPHLSWVK---VTGSLPKDKPVTDKFGKVLKIENVSAADEGTYQC 315
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
TA+N G + + + V P + ++ P + NL L C A + W N
Sbjct: 316 TASNPVGRAKHEFHVHVEEPPRWIKE-PRGGVYSLGENLLLLCEAIGNP--EPTIQWKLN 372
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G+ I + T I G L + N D Y C + G + V V
Sbjct: 373 GMPIDS------RTFRGRISDGELSLINLQLQDTAVYHCEASNKHGTLLASANVNV 422
>gi|358415965|ref|XP_003583257.1| PREDICTED: contactin-2-like [Bos taurus]
Length = 783
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/479 (30%), Positives = 224/479 (46%), Gaps = 24/479 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+T C AFG P W + +G L ++ + L I + E D Y+
Sbjct: 114 VTLECFAFGNPVPRIKWRKVDGSL----------SPQWATAEPTLQIPSVGFE-DEGTYE 162
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N K R + ++ +P + + + S+ A G ++ C P+P W +
Sbjct: 163 CEAENT-KGRDTVQGRIIVQAQPEWLR--VISDREADIGSDLHWACAAAGKPRPAVRWLR 219
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+G + S R ++ G+L S +S +DSG+Y C A N HG + L V +
Sbjct: 220 NGEPLTSQARVEVLA-GDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAV-QDATKITL 277
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P I NL L+C A + +D+ ++WT + I + + ++ G L
Sbjct: 278 APSSADINLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDFDKPGGHYQRASVKETVGDLT 337
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I NA G+Y C ++ V S + TV+V GPPG PGGV V ++ TS + W+ G
Sbjct: 338 ILNAQLRHGGKYTCTAQTVVDSASKEATVLVRGPPGAPGGVVVRDISDTSVQLSWSRGFD 397
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N PI Y + ART + W V + E G E + L PW YEF+V+A
Sbjct: 398 NHSPIAKYTLQARTLPSGKWKQVRTNPTNIE-----GNAETAQVLGLTPWMDYEFRVLAS 452
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N LG GEPS PS + T P APS + GGGG G+L+++W P+ RE Q+ Y +
Sbjct: 453 NILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMSREYQHGGGFGYLV 512
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+R++ T +Q+ + + V S YT +EVK+++ N G GPES V ++
Sbjct: 513 SFRRQGGTSWQTARVPG-ADAQYFVYSNDSIRPYTPFEVKIRSYNRRGDGPESLVAVVY 570
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 198/512 (38%), Gaps = 79/512 (15%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P W RNGE PL Q R + L L+ E D
Sbjct: 196 DIGSDLHWACAAAGKPRPAVRWLRNGE-------PLTSQARVEVLAGDLRFSKLSLE-DS 247
Query: 62 AMYQCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
MYQC A+N+ T Y+SA+L V +TL PS L G N+T+ C+
Sbjct: 248 GMYQCVAENKHGTIYASAELAVQDATKITLAPSSADINL--------GDNLTLQCHASHD 299
Query: 117 PKPK--FVWKKDGNII------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGM 167
P FVW D I G R + E G+L I G Y+CTA V
Sbjct: 300 PTMDLTFVWTLDDFPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDS 359
Query: 168 DESKGRLIVLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ ++V P P + + + ++QL S + +A +T + +
Sbjct: 360 ASKEATVLVRGPPG----APGGVVVRDISDTSVQLSWSRGFDNHSPIAK-YTLQARTLPS 414
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG- 284
++ T NI+G +YE V ++ ++ G P P
Sbjct: 415 GKWKQVRTNPTNIEGNAETAQVLGLTPWMDYEFRVLAS--------NILGTGEPSGPSSK 466
Query: 285 VQVVEVHKT--------------SATIQWTDGATNGRPITH-----YKIIARTNWNSTWF 325
+Q E + T+ WT + R H Y + R ++W
Sbjct: 467 IQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMS---REYQHGGGFGYLVSFRRQGGTSW- 522
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+ V G + + ++ + P++ +E K+ + N G G S + Y+ ++
Sbjct: 523 -QTARVPGADAQYFVYSNDS-----IRPYTPFEVKIRSYNRRGDGPESLVAVVYSA-EEE 575
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 445
P AP ++ ++++SWEP+ ++ N + Y+I + K +E ++ G
Sbjct: 576 PRVAPPKVWAKAVSSSEMNVSWEPV-QQDMNGILLGYEIRYWKAGAKAAAAERVRTAGLD 634
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
A+V T+Y V V+A N G GP S
Sbjct: 635 TSALVT--GLHASTKYHVTVRAYNRAGTGPAS 664
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 107/270 (39%), Gaps = 32/270 (11%)
Query: 19 VTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL---- 72
++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 21 LSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDFST 74
Query: 73 KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+K
Sbjct: 75 KSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWRK- 132
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ GS + L I V +D G Y C A N G D +GR+IV P + +
Sbjct: 133 --VDGSLSPQWATAEPTLQIPSVGFEDEGTYECEAENTKGRDTVQGRIIVQAQPEWLRVI 190
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ +L C+A + A W NG + + + + G L +
Sbjct: 191 SDREADIGS-DLHWACAAAGKP--RPAVRWLRNGEPLTSQ-------ARVEVLAGDLRFS 240
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVE 276
S D+G Y+CV ++ G I + V+
Sbjct: 241 KLSLEDSGMYQCVAENKHGTIYASAELAVQ 270
>gi|357609885|gb|EHJ66734.1| neuroglian [Danaus plexippus]
Length = 1273
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 215/464 (46%), Gaps = 28/464 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P+ T SW NG+ + E+ R + N +TI L ++D Y C A N
Sbjct: 361 CRAGGTPEPTISWVHNGKPIEQ----AENNPRRQVTANSITITDL-VKKDTGNYGCNATN 415
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
Y + V ++ P K+ P AG + C AP+P W +D +I
Sbjct: 416 SNGYVYKDVFINVQSIPPEIKEGPDNLTVVAG--STAALRCRVFGAPRPIVRWMRD-DID 472
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+GG+ I + G+L+I+ VS D G Y C A N G + G L V ++ P
Sbjct: 473 VTGGKYNITKEGDLVIADVSFTDVGTYQCYAKNKFGEKSAFGSLTVKKRTVITDK-PEPY 531
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
+AA + RC+A+ ++ L + IW ++G I D + I D LL I++ S
Sbjct: 532 EVAAGSSATFRCNANADDSLKLDIIWLNDGQPI---DFDNQPRFRITNDYSLL-ISDTSE 587
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
D+GEY C+ K+ + + + T+ V+ P P ++ +E H+ +AT++W N PI
Sbjct: 588 LDSGEYTCIAKTAIDEARAQATLTVQDKPN-PPALEGIECHERTATLRWHSMGDNRAPIL 646
Query: 311 HYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 369
Y I T++ W S++V + S L PW+ Y F+V A N++G
Sbjct: 647 RYSIQYNTSFTPHAWDLASDNVPAIDT---------SWTVQLSPWANYTFRVTASNKIGA 697
Query: 370 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429
PSS S T D PY+ P + G G ++ I+W +P+ + N P YY + W++
Sbjct: 698 SAPSSHSDVCTTQPDVPYKNPDNVEGKGTDPTNMVITWSKMPQIEHNGPGFYYLVSWKRN 757
Query: 430 -NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ + E ++++ + P+ + Y++KV A+N G
Sbjct: 758 ISGAAWSEEQVRDWATTEYVIPNTPT---FKPYKIKVIAVNSKG 798
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 18/228 (7%)
Query: 64 YQCRAKNQLKTRYSSA-----QLRVLTLKP-SFKKRP-LESETY----AGEGGNVTIFCN 112
Y C AK+ + Y Q++ + P S K +P L+ T A G V ++C
Sbjct: 211 YTCAAKSVFRNEYKLGNKVYLQVQQTGISPTSNKHQPVLQYATRRVEKAWRGKKVELYCI 270
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VWKK+G I S R G L+I +D G Y+C +N G E+
Sbjct: 271 YGGTPLPQVVWKKEGRTIISSQRITQDNYGKTLVIKRAGYEDQGTYTCEVSNGVGTAETY 330
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ + ++ + P +A ++C A ++ W HNG I + N
Sbjct: 331 SIQLNVEAAPFFIEEPQFQNLAEGETAVIQCRAGGTPEPTIS--WVHNGKPIEQAENN-- 386
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P + + IT+ D G Y C ++ G + + V+ P
Sbjct: 387 --PRRQVTANSITITDLVKKDTGNYGCNATNSNGYVYKDVFINVQSIP 432
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 125/340 (36%), Gaps = 59/340 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAK 69
CEA G P Y W +NG+ + +R Q T+ P D YQC A
Sbjct: 59 CEAEGEPAPKYRWIKNGKSFEYTSY----DNRISQQPGRGTLVVSQPRNEDLGQYQCFAY 114
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCN-PEAAPKPKFVWKKDG 127
N+ T S++ SFK+ +T A EG + C P+ P P W
Sbjct: 115 NEWGTATSNSVFVRKAELNSFKETDGPQKTITAQEGLPFKLTCEPPDGHPSPNVYWM--- 171
Query: 128 NIIGSGGRRKIFEN--------GNLLISPVSRDDSGI---YSCTATNVHGMDESKGRLIV 176
+ G G+ K N GNL S V+R D+ + Y+C A +V + G +
Sbjct: 172 -LQGEQGQLKTINNSRMTLDPEGNLWFSNVTRFDASVDYAYTCAAKSVFRNEYKLGNKVY 230
Query: 177 LH------GPSYYEQLPPKITIAAHR--------NLQLRCSAHTEELLDVAYIWTHNGVR 222
L P+ + P + A R ++L C L V +W G
Sbjct: 231 LQVQQTGISPTSNKHQ-PVLQYATRRVEKAWRGKKVELYCIYGGTPLPQV--VWKKEGRT 287
Query: 223 IGNMDLNELETPNINID--GGLLEITNASFADAGEYECVVKSTVGKISTKTTVI-VEGPP 279
I + + I D G L I A + D G Y C V + VG T + + VE P
Sbjct: 288 I-------ISSQRITQDNYGKTLVIKRAGYEDQGTYTCEVSNGVGTAETYSIQLNVEAAP 340
Query: 280 GLPGGVQVVEVHK-TSATIQWTDGAT---------NGRPI 309
Q + + +A IQ G T NG+PI
Sbjct: 341 FFIEEPQFQNLAEGETAVIQCRAGGTPEPTISWVHNGKPI 380
>gi|354483119|ref|XP_003503742.1| PREDICTED: neural cell adhesion molecule L1-like protein
[Cricetulus griseus]
Length = 1206
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 217/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG + + P D F ++ ++ L P A+YQC A N
Sbjct: 349 CEAEGEPQPTIKWRVNGFPIENHPFP---GDVMFTRE--ISFTNLQPNHT-AVYQCEASN 402
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKFVWK-KDGN 128
T +SA + V+ + P K + E YA G + + C A+PK +W+ D
Sbjct: 403 IHGTILASANIDVVDVVPLIKTK--NEENYATVLGYSAFLHCEYFASPKATVIWEVADEA 460
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G R ENG L I + +D+G YSC N G L + + + + P
Sbjct: 461 HPLEGSRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNA-TKLKVSPK 519
Query: 189 KITIAAHRNLQLRCSAHTEELLD--VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G D+N E I IDG L I+
Sbjct: 520 NPRIPKSHMLELHCESQCDSHLKHTLKLSWSKDG---ETFDINGTEDGRIVIDGANLTIS 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N S D G Y C ++ + IS KT V V G P PG + + E S + W G +
Sbjct: 577 NISVEDQGIYSCSAQTALDSISEKTQVTVLGVPDPPGSLLLSERQNRSVRLSWEAGDDHN 636
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y I N W +E+ R G + ++ + L P+ Y+F+VIA
Sbjct: 637 SNISEYIIEFEGNREEPGKW---------QELTRIPGEETEAVLS-LAPYVRYQFRVIAV 686
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 687 NEVGRSYPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 746
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE + VT++
Sbjct: 747 SWKPQGAPEEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINQLGSGPEPQPVTLY 800
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 186/499 (37%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P T W + E PLE RY +N Y E D Y C N
Sbjct: 442 CEYFASPKATVIW-----EVADEAHPLEG-SRYHTHENGTLEIYRTTEEDAGSYSCWVDN 495
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P +++ E + C+ K W K
Sbjct: 496 AMGKAVITANLDIRNATKLKVSP---KNPRIPKSHMLEL-HCESQCDSHLKHTLKLSWSK 551
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG +I G+ R + + NL IS +S +D GIYSC+A K ++ VL P
Sbjct: 552 DGETFDINGTEDGRIVIDGANLTISNISVEDQGIYSCSAQTALDSISEKTQVTVLGVPD- 610
Query: 183 YEQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P + ++ +N +R S H + + YI G R EL
Sbjct: 611 ---PPGSLLLSERQNRSVRLSWEAGDDHNSNISE--YIIEFEGNREEPGKWQEL----TR 661
Query: 238 IDGGLLEITNASFADAG----EYECVVKSTVGK-ISTKTTVIVEGPPGLPG----GVQVV 288
I G E T A + A ++ + + VG+ ++ + E PP P ++V
Sbjct: 662 IPG---EETEAVLSLAPYVRYQFRVIAVNEVGRSYPSQPSDHHETPPAAPDKNPQNIRVQ 718
Query: 289 EVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
I+W P Y R +W E + V +T R
Sbjct: 719 ASQPKEMIIKWEPLKSMEQNGPGLEY----RVSWKPQ--GAPEEWEEETVTNHTLR---- 768
Query: 347 IENVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
V+ P ++ Y+ +V A N+LG G P Y+ D P AP G +
Sbjct: 769 ---VMTPTVYAPYDVQVQAINQLGSGPEPQPVTLYSG-EDYPSTAPVIHGVDVMNSTLVK 824
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTE 460
++W +P+E + Y+I W K KE + + R +PS ++E
Sbjct: 825 VTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSE 884
Query: 461 YEVKVQAINDVGPGPESEV 479
Y + V A N G GPESE
Sbjct: 885 YHLTVLAYNSKGAGPESEA 903
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 112/290 (38%), Gaps = 36/290 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQCR 67
CEA G P+ +SW ++ + + L D R + +N T + N Y+C
Sbjct: 54 CEAKGNPEPKFSWTKDDKHFD-----LSD-PRIIVSNNSGTFKIPNEGHISHFQGKYRCF 107
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
A N+L T S ++ P F K +E EG ++ + CNP P ++ +
Sbjct: 108 ASNRLGTAISEEIEFIVPGVPKFPKEKIEPMDVE-EGDSIVLPCNPPKGLPPLHIYWMNI 166
Query: 128 NI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLHGPSY 182
+ I R + + G+L + V DS Y C A + + + + ++ +
Sbjct: 167 ELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPKLRTIVQKMPMKLTVNSSNL 226
Query: 183 YEQLPPKI-------------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+Q PK+ T+ L L C A E L W+ G +
Sbjct: 227 IKQRKPKLLLPPAQRGSSSTMTVLKGETLLLECFA--EGLPTPQVEWSKPGSELPKGRET 284
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ G L+I N S+ D G Y C + +GK S +IV+ PP
Sbjct: 285 KENY------GKTLKIENISYHDKGNYRCTASNLLGKASHDFHIIVQEPP 328
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 10/168 (5%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
++ P + N +K R L L P+ +R S +G + + C E P
Sbjct: 213 QKMPMKLTVNSSNLIKQRKPK-----LLLPPA--QRGSSSTMTVLKGETLLLECFAEGLP 265
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
P+ W K G+ + G K L I +S D G Y CTA+N+ G S I++
Sbjct: 266 TPQVEWSKPGSELPKGRETKENYGKTLKIENISYHDKGNYRCTASNLLG-KASHDFHIIV 324
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P +++ P + + L C A E + W NG I N
Sbjct: 325 QEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRVNGFPIEN 370
>gi|156546343|ref|XP_001606583.1| PREDICTED: neuroglian-like isoform 1 [Nasonia vitripennis]
Length = 1254
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 215/467 (46%), Gaps = 26/467 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + CEA GVP W NG+ ++ R + N + I L + D Y C
Sbjct: 350 VEFKCEATGVPKPEIKWIHNGKPISEAPF----NPRRKVTPNSIIIEKL-LKNDTGNYGC 404
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL L+P + P++ T +G + + C APKP+ W ++
Sbjct: 405 NATNSLGYVYKDVYVNVLALEPEILQPPMDESTV--DGKTIRLTCRVFGAPKPEVKWVRN 462
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + +GGR KI E+G+L I V D+G Y+C A+N G + G L V + +
Sbjct: 463 GQEL-TGGRYKILESGDLEIENVIFSDAGEYNCHASNKFGKVNATGFLAVKEH-TRITDV 520
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AA RC+A T+ L++ W G I D E E I L IT
Sbjct: 521 PEDYEVAAGATATFRCNAVTDSTLELHIDWLSKGEPI---DF-EAEPRFIRSTDYSLMIT 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ D+G Y CV ++ + + + T+IV+ P P + V A + WT N
Sbjct: 577 KTTELDSGTYTCVARTDLDEARAQATLIVQDVPNSPT-LLGVSCTSNQAFVSWTPMGDNR 635
Query: 307 RPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
PI Y I T++ TW +HV E RY + + PW+ Y F+VIA N
Sbjct: 636 SPILRYAIQYNTSFTPDTWEYAKDHVPATE-QRYAVQ--------MSPWANYTFRVIAYN 686
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G +PS S T D PY P + G G +L ISW +P+ + NAP Y+++
Sbjct: 687 KIGPSQPSQHSHVCTTLPDVPYNNPDNVMGRGDDPQNLVISWTVMPQIEHNAPKFKYQVY 746
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+++ D + ++E N + I ++ Y +Y++KV A+N+ G
Sbjct: 747 YKR--DIPGEDWRIEEITNWKQNTLVINNQPTYQKYKIKVGALNEKG 791
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 98/260 (37%), Gaps = 44/260 (16%)
Query: 43 YFIQDNVLTIRYLNPER--------------------DPAMYQCRAKNQLKTRYSSAQLR 82
+ IQD+ TI+ +N R D Y C A + + Y
Sbjct: 163 WLIQDHAGTIKSINNSRMTLDPEGNLWFSNVTKLDASDDYYYACAATSLFRNEYKLGNRV 222
Query: 83 VLTL------KPSFKKRPLES-----ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 131
+L + S K+ P++ A G + +FC P P VW K+G I
Sbjct: 223 LLNVISTGSTASSNKREPVKQYVSRKNEVALRGKKIELFCIFGGTPLPLTVWSKNGQRIR 282
Query: 132 SGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESKG-RLIVLHGPSYYEQLPPK 189
R G +L+I V+ DD G Y+C +N G +S L VL P Y+ P
Sbjct: 283 PNDRVTEGNYGKSLIIKHVNFDDEGTYTCDVSNGVGSAQSYSINLEVLSVP-YFTVEPEI 341
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE--TPNINIDGGLLEITN 247
+ A ++ +C A ++ W HNG I N TPN I LL+
Sbjct: 342 VNAAEDETVEFKCEATGVPKPEIK--WIHNGKPISEAPFNPRRKVTPNSIIIEKLLK--- 396
Query: 248 ASFADAGEYECVVKSTVGKI 267
D G Y C +++G +
Sbjct: 397 ---NDTGNYGCNATNSLGYV 413
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 113/290 (38%), Gaps = 42/290 (14%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N+ CEA G P Y W +NG+ + DR Q T+ P + D
Sbjct: 45 ENEKPFLVECEAEGEPAPLYEWIKNGKDFKWQAY----DDRISQQPGRGTLVISKPRDED 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
YQC AKN+ S++ SFK + + + + EG + C P+ PKP
Sbjct: 101 LGQYQCFAKNEWGIATSNSVFVRKAELNSFKDQNPVTLSVS-EGDPYKLTCQPPDGWPKP 159
Query: 120 KFVW---KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSG---IYSCTATNVHGMDESKG 172
W G I R + GNL S V++ D+ Y+C AT++ + G
Sbjct: 160 NVYWLIQDHAGTIKSINNSRMTLDPEGNLWFSNVTKLDASDDYYYACAATSLFRNEYKLG 219
Query: 173 RLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHN 219
++L+ S ++ P K ++ + LR EL + +W+ N
Sbjct: 220 NRVLLNVISTGSTASSNKREPVKQYVSRKNEVALR--GKKIELFCIFGGTPLPLTVWSKN 277
Query: 220 GVRIGNMDLNELETPNINID----GGLLEITNASFADAGEYECVVKSTVG 265
G RI PN + G L I + +F D G Y C V + VG
Sbjct: 278 GQRI---------RPNDRVTEGNYGKSLIIKHVNFDDEGTYTCDVSNGVG 318
>gi|345498258|ref|XP_003428190.1| PREDICTED: neuroglian-like isoform 2 [Nasonia vitripennis]
Length = 1248
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 215/467 (46%), Gaps = 26/467 (5%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + CEA GVP W NG+ ++ R + N + I L + D Y C
Sbjct: 350 VEFKCEATGVPKPEIKWIHNGKPISEAPF----NPRRKVTPNSIIIEKL-LKNDTGNYGC 404
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL L+P + P++ T +G + + C APKP+ W ++
Sbjct: 405 NATNSLGYVYKDVYVNVLALEPEILQPPMDESTV--DGKTIRLTCRVFGAPKPEVKWVRN 462
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + +GGR KI E+G+L I V D+G Y+C A+N G + G L V + +
Sbjct: 463 GQEL-TGGRYKILESGDLEIENVIFSDAGEYNCHASNKFGKVNATGFLAVKEH-TRITDV 520
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AA RC+A T+ L++ W G I D E E I L IT
Sbjct: 521 PEDYEVAAGATATFRCNAVTDSTLELHIDWLSKGEPI---DF-EAEPRFIRSTDYSLMIT 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ D+G Y CV ++ + + + T+IV+ P P + V A + WT N
Sbjct: 577 KTTELDSGTYTCVARTDLDEARAQATLIVQDVPNSPT-LLGVSCTSNQAFVSWTPMGDNR 635
Query: 307 RPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
PI Y I T++ TW +HV E RY + + PW+ Y F+VIA N
Sbjct: 636 SPILRYAIQYNTSFTPDTWEYAKDHVPATE-QRYAVQ--------MSPWANYTFRVIAYN 686
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G +PS S T D PY P + G G +L ISW +P+ + NAP Y+++
Sbjct: 687 KIGPSQPSQHSHVCTTLPDVPYNNPDNVMGRGDDPQNLVISWTVMPQIEHNAPKFKYQVY 746
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+++ D + ++E N + I ++ Y +Y++KV A+N+ G
Sbjct: 747 YKR--DIPGEDWRIEEITNWKQNTLVINNQPTYQKYKIKVGALNEKG 791
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 98/260 (37%), Gaps = 44/260 (16%)
Query: 43 YFIQDNVLTIRYLNPER--------------------DPAMYQCRAKNQLKTRYSSAQLR 82
+ IQD+ TI+ +N R D Y C A + + Y
Sbjct: 163 WLIQDHAGTIKSINNSRMTLDPEGNLWFSNVTKLDASDDYYYACAATSLFRNEYKLGNRV 222
Query: 83 VLTL------KPSFKKRPLES-----ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG 131
+L + S K+ P++ A G + +FC P P VW K+G I
Sbjct: 223 LLNVISTGSTASSNKREPVKQYVSRKNEVALRGKKIELFCIFGGTPLPLTVWSKNGQRIR 282
Query: 132 SGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESKG-RLIVLHGPSYYEQLPPK 189
R G +L+I V+ DD G Y+C +N G +S L VL P Y+ P
Sbjct: 283 PNDRVTEGNYGKSLIIKHVNFDDEGTYTCDVSNGVGSAQSYSINLEVLSVP-YFTVEPEI 341
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE--TPNINIDGGLLEITN 247
+ A ++ +C A ++ W HNG I N TPN I LL+
Sbjct: 342 VNAAEDETVEFKCEATGVPKPEIK--WIHNGKPISEAPFNPRRKVTPNSIIIEKLLK--- 396
Query: 248 ASFADAGEYECVVKSTVGKI 267
D G Y C +++G +
Sbjct: 397 ---NDTGNYGCNATNSLGYV 413
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 113/290 (38%), Gaps = 42/290 (14%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N+ CEA G P Y W +NG+ + DR Q T+ P + D
Sbjct: 45 ENEKPFLVECEAEGEPAPLYEWIKNGKDFKWQAY----DDRISQQPGRGTLVISKPRDED 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
YQC AKN+ S++ SFK + + + + EG + C P+ PKP
Sbjct: 101 LGQYQCFAKNEWGIATSNSVFVRKAELNSFKDQNPVTLSVS-EGDPYKLTCQPPDGWPKP 159
Query: 120 KFVW---KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSG---IYSCTATNVHGMDESKG 172
W G I R + GNL S V++ D+ Y+C AT++ + G
Sbjct: 160 NVYWLIQDHAGTIKSINNSRMTLDPEGNLWFSNVTKLDASDDYYYACAATSLFRNEYKLG 219
Query: 173 RLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHN 219
++L+ S ++ P K ++ + LR EL + +W+ N
Sbjct: 220 NRVLLNVISTGSTASSNKREPVKQYVSRKNEVALR--GKKIELFCIFGGTPLPLTVWSKN 277
Query: 220 GVRIGNMDLNELETPNINID----GGLLEITNASFADAGEYECVVKSTVG 265
G RI PN + G L I + +F D G Y C V + VG
Sbjct: 278 GQRI---------RPNDRVTEGNYGKSLIIKHVNFDDEGTYTCDVSNGVG 318
>gi|383863731|ref|XP_003707333.1| PREDICTED: neuroglian-like [Megachile rotundata]
Length = 1251
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 217/470 (46%), Gaps = 32/470 (6%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + C A GVP W NG+ + SE P R + N + I L ++D Y C
Sbjct: 350 VEFKCAASGVPTPEIKWIHNGKPI-SEAPP---NPRRKVTANSIIIEKLT-KKDTGNYGC 404
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL L+P + P + T +G V I C APKP W +
Sbjct: 405 NATNSLGYVYKDVYVNVLALEPEIIQPPADMATV--DGKTVRITCRVFGAPKPAVKWIRK 462
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + +GGR K ++G+L I V D+G+Y+C A+N G E+ G L+V ++
Sbjct: 463 GQEL-TGGRYKTLDSGDLEIENVIFLDAGVYTCHASNKFGEVEATGNLVVKEHTRITDE- 520
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AA RC+A T+ L + W NG I D E+E I L IT
Sbjct: 521 PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGKPI---DF-EMEPRFIRSTDYSLMIT 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ D+G Y CV ++ + + + T+IV+ P P + V+ + A++ WT N
Sbjct: 577 KTTELDSGTYTCVARTELDETKAQATLIVQDVPN-PPKLLSVKCMENEASVHWTPMGDNR 635
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I Y I T + + +S+ + Y + PW+ Y F+V+A N+
Sbjct: 636 ASILRYTIQYNTTFTPDTWEISKDAVPATEQTYVVP--------MSPWANYTFRVLAWNK 687
Query: 367 LGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
+G PS PSP + T D PY+ P + G G +L ISW +P+ + NAP Y+
Sbjct: 688 IG---PSLPSPHSDVCTTLPDVPYKNPDNVAGKGTTPQNLVISWTAMPQIEHNAPKFMYR 744
Query: 424 IFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+++R+ E + E ++++ + V P+ Y Y++KV AIN G
Sbjct: 745 VYYRRDIPGEKWTIEDIQDWKKNSLVVDNQPT---YQRYKIKVVAINARG 791
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 115/288 (39%), Gaps = 38/288 (13%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N CEA G P Y W +NG+ P D DR Q T+ P + D
Sbjct: 45 ENDKPFLIECEAEGEPAPRYRWIKNGKNFE---WPAYD-DRISQQPGRGTLVISRPRDED 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCN-PEAAPK 118
YQC A+N+ T S++ SFK + P+ + A EG + C P+ PK
Sbjct: 101 LGQYQCFAENEWGTATSNSVFVRKAELNSFKDENPISLD--ANEGQPFKLTCQPPDGWPK 158
Query: 119 PKFVWKKDGNIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDES 170
P W NI GS R + GNL S V+R D+ Y+C AT+++ +
Sbjct: 159 PNVYWMIQ-NIAGSIKSINNSRMTLDPEGNLWFSNVTRYDASDDFYYACAATSLYRNEYK 217
Query: 171 KGRLIVLH------GPSYYEQLPPKITIAAHRNLQLR-------CSAHTEELLDVAYIWT 217
G ++LH S + P K ++ + LR C L + +W+
Sbjct: 218 IGNRVLLHVISSGTSASQNKHEPVKQYVSRKNEVALRGNKIELYCIYGGTPLPQI--VWS 275
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
NG I D + N G L I + +F D G Y C + VG
Sbjct: 276 KNGQPIKTND--RITQGNY---GKSLIIKHVNFKDEGTYTCEASNGVG 318
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 7/168 (4%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 159
A G + ++C P P+ VW K+G I + R G +L+I V+ D G Y+C
Sbjct: 252 ALRGNKIELYCIYGGTPLPQIVWSKNGQPIKTNDRITQGNYGKSLIIKHVNFKDEGTYTC 311
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A+N G +S + + ++ P I A ++ +C+A ++ W HN
Sbjct: 312 EASNGVGDAKSNSINLQVMAVPFFTIEPEIINAAEDETVEFKCAASGVPTPEIK--WIHN 369
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
G I N P + + I + D G Y C +++G +
Sbjct: 370 GKPISEAPPN----PRRKVTANSIIIEKLTKKDTGNYGCNATNSLGYV 413
>gi|328705404|ref|XP_003242788.1| PREDICTED: neuroglian-like [Acyrthosiphon pisum]
Length = 1128
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 213/474 (44%), Gaps = 30/474 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P + W NG LN E P R + N +TI L + D Y C A N
Sbjct: 359 CEASGNPQPSIKWIHNGRPLN-EASP---NPRRSVTSNCITITSLT-KNDTGNYGCNATN 413
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ Y + VL L P + +T+ EG I C PKP W K+ NI
Sbjct: 414 SIGYVYKDVYINVLALAPEIVELSQNVKTF--EGSTTVIKCKSSGVPKPHTKWTKN-NIE 470
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+GGR +NG+L I +S D+GIY C ATN +G + L V + P
Sbjct: 471 ITGGRYTTLDNGDLQIRGISFTDAGIYICIATNNYGTANASVTLTVKEHTKIITE-PEDN 529
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDGGLLEITNAS 249
+ + + +C+A + L++ +W N N +N P + + + IT
Sbjct: 530 VVVSGSMVTFQCTAIADHSLNLKIVWLAN-----NEPINYYTQPRYVKNNDHSMTITKTI 584
Query: 250 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 309
D+G Y C+ K+ + ++S T+IV+ P P ++++ + +A ++W N I
Sbjct: 585 ELDSGIYTCLAKTELDQVSANATLIVQDKPNPPTVLEII-CNNRNAVVKWKSMGDNRARI 643
Query: 310 THYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 368
Y + T+++ TW S++V ++ + PW+ + F+VIA N +G
Sbjct: 644 IRYTVEYNTSFDPGTWLVASDNVPASNLELIVP---------MTPWANFTFRVIAKNNVG 694
Query: 369 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 428
PS S T D PY+ P I + L ISW P+P+ NAP + Y+++W++
Sbjct: 695 KSNPSLHSSVCTTQPDVPYKNPENIEAYSVEPSKLVISWTPMPKICHNAPGLRYRVYWKQ 754
Query: 429 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP--GPESEVV 480
E + KE N I + IP++ Y+VK+ A N+ G G + EV+
Sbjct: 755 NILGEVWN--FKEITNYTINKLSIPNQPIDKHYKVKIVAFNEKGESIGLQKEVI 806
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 9/163 (5%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNV 164
V +FC +P P+ +W KDG I R I +N + +I V+ +D G Y+C +N
Sbjct: 263 VELFCIYGGSPLPQTIWLKDGRAI-QFNERIILKNYGKSFIIRKVNFEDRGKYTCEVSNG 321
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G+ ES ++ + + +P + ++C A + W HNG +
Sbjct: 322 VGLPESYNIVLDVMAVPSFTIIPQIVEGGEGETAVIKCEASGNPQPSIK--WIHNGRPLN 379
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P ++ + IT+ + D G Y C +++G +
Sbjct: 380 EASPN----PRRSVTSNCITITSLTKNDTGNYGCNATNSIGYV 418
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 122/334 (36%), Gaps = 52/334 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P Y W +NG+ + + DR + ++ + P + D YQC A+
Sbjct: 62 CEAEGEPVPKYRWMKNGKNFDWQAY----DDRIAQKPGSGSLVVIKPRDEDLGQYQCFAE 117
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETY--AGEGGNVTIFCNPEAA-PKPKFVWKK- 125
N S + V+ +K E Y A EG + C+P A PKP W K
Sbjct: 118 NSWGIATSKS---VMVVKAELNLFSNEPNLYIDAQEGEPFKLSCHPPTAWPKPVVNWLKK 174
Query: 126 --DGNIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATNVHGMDESKGRLIVLH---- 178
+G R + GNL S V++ D+ Y C A ++ + G + ++
Sbjct: 175 NENGTNAVDSSRITVDPEGNLWFSYVTQHDANSEYHCYAKSLIMSEFKYGNPVYINVIQT 234
Query: 179 -GPSYYEQLPPKITIAAHRN--------LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
G + PP RN ++L C L IW +G I N
Sbjct: 235 AGTLLQNKYPPVRQYVNRRNEVALLNKAVELFCIYGGSPLPQT--IWLKDGRAI---QFN 289
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV--------------IV 275
E + G I +F D G+Y C V + VG + V IV
Sbjct: 290 ERII--LKNYGKSFIIRKVNFEDRGKYTCEVSNGVGLPESYNIVLDVMAVPSFTIIPQIV 347
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 309
EG G ++ +I+W NGRP+
Sbjct: 348 EGGEGETAVIKCEASGNPQPSIKWIH---NGRPL 378
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 10/162 (6%)
Query: 109 IFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE---NGNLLISPVSRDDSGIYSCTATNV 164
I C E P PK+ W K+G N +I + +G+L++ +D G Y C A N
Sbjct: 60 IDCEAEGEPVPKYRWMKNGKNFDWQAYDDRIAQKPGSGSLVVIKPRDEDLGQYQCFAENS 119
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G+ SK ++V + + P + I A + S H + N ++
Sbjct: 120 WGIATSKSVMVVKAELNLFSN-EPNLYIDAQEGEPFKLSCHPPTAWPKPVV---NWLKKN 175
Query: 225 NMDLNELETPNINID-GGLLEITNASFADA-GEYECVVKSTV 264
N +++ I +D G L + + DA EY C KS +
Sbjct: 176 ENGTNAVDSSRITVDPEGNLWFSYVTQHDANSEYHCYAKSLI 217
>gi|256089229|ref|XP_002580716.1| contactin; neuroglian; septate junction protein [Schistosoma
mansoni]
Length = 1163
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 224/506 (44%), Gaps = 44/506 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNS--ETLPLEDQDRYFIQDNVLT-----IR 53
+D +D+ TCEA G+P+ T+ W+RN ++ T L I+D L+ +
Sbjct: 442 VDINSDVFLTCEASGIPNPTHEWYRNDITVSQLIATGKLNPTQYTIIRDGSLSHSFFILL 501
Query: 54 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP 113
+ D M+ C A N L + SSA++RVL L P+F+K P+ G + C P
Sbjct: 502 FQVKLSDSGMFTCLAWNSLGSEASSAEVRVLELAPTFRKHPVMPNE-GMVGSTAVMECQP 560
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR------DDSGIYSCTATNVHGM 167
E AP W DG ++ + NG++ + P R D + C N M
Sbjct: 561 EGAPAMTVEWLHDGTVLTTSDTLMNVSNGDVDLLPGERLVDLEYADDIVLLCD--NAQAM 618
Query: 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ +L + Y P +C ++ D + T + R +
Sbjct: 619 QSALNQLAI-SVRRYGMCFAPS-----------KCKVLLQDWQDSHPVLTLDDAR--RYE 664
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L +L P N G L+I N F ++G Y C ++ + S+ + + GPPG GGV V
Sbjct: 665 LAQLYRPYGNY-FGTLKIVNVQFENSGNYTCAAETPLNSQSSSGVIRIAGPPGPCGGV-V 722
Query: 288 VEVHK--TSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVI--GKEVDRYTG 341
V+ H + W G ++ I +++I A ++ + W ++ +V ++ + +
Sbjct: 723 VDPHVGVDRVNVSWAVGTSHLFQILYFQIEANAMYDPPNQWMIMASNVSISSTKLLKPSD 782
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
R+ + N L Y +V AGN LG GEPS PS + T KP P + GGGGK G
Sbjct: 783 RRMTVVRN-LAANMAYRIRVRAGNALGLGEPSPPSLSFTTLPTKPTLIPQNVTGGGGKHG 841
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-----SETLKEYGNVGIAVVRIPSEF 456
L W PL R +N PN +Y+ + K + E+ + + + G + +
Sbjct: 842 TLVFKWIPLKRVNENGPNFHYRAHIKAKENAEYSIHDLWTAKMSDDGKFMQYTLTLGDNL 901
Query: 457 YYTEYEVKVQAINDVGPGPESEVVTI 482
+Y Y+V VQA+N G GP SE VT+
Sbjct: 902 FYKPYDVMVQAVNSEGAGPLSEPVTV 927
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 115/303 (37%), Gaps = 48/303 (15%)
Query: 11 CEAFGVPDVTYSWFR-NGELLNSET-------------LPLEDQDRYFIQDNVLTIRYLN 56
CEA G P TY W+ + E+ + T E R I L I +
Sbjct: 129 CEANGNPQPTYKWYYVSTEMRTNSTGDTITILHRTLIDAAAEPSGRISISAGSLVIHNPD 188
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
D M+QC AKN + S + + K+P +E + T+ C P A
Sbjct: 189 TSTDSQMFQCEAKNIYGSILSRTARIIFGQLETAPKQP-RNERIVMSHQSETLPCEPPAH 247
Query: 117 PKPKFV-----WKKDGNI--IGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTAT---N 163
P + K+G + + RR +F G + S V+ DSG+Y C T +
Sbjct: 248 SPPDSLLYTVYMNKNGELEPVLPEYRRNLFISQAKGLIGFSEVTVVDSGVYVCMITMQFD 307
Query: 164 VHGMDESKGR----LIVLHG------PSYYEQLPPKITIAAHRN--LQLRCSAHTEELLD 211
H M +S V + P Y+ P R ++L C A LD
Sbjct: 308 GHRMYDSPKLPDMPFTVRYSNEPRQDPRIYDDFPAVWPTNPQRGQLVRLECFAAGYSQLD 367
Query: 212 -VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ Y W +D L T ++ ++E+ N D GEYEC V+ ++GK++
Sbjct: 368 GLKYSWRR-------LDGAPLRTDSLKDYDRVIELPNVQPEDQGEYECNVEDSLGKMARP 420
Query: 271 TTV 273
T+
Sbjct: 421 KTL 423
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 19 VTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
+ YSW R +G L +++L +D DR V+ + + PE D Y+C ++ L
Sbjct: 369 LKYSWRRLDGAPLRTDSL--KDYDR------VIELPNVQPE-DQGEYECNVEDSLGKMAR 419
Query: 78 SAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD----GNIIGS 132
L + +T KP F PL++ T +V + C P P W ++ +I +
Sbjct: 420 PKTLNLKITAKPYFTT-PLQN-TVVDINSDVFLTCEASGIPNPTHEWYRNDITVSQLIAT 477
Query: 133 GG----RRKIFENGNL------LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
G + I +G+L L+ V DSG+++C A N G + S + VL
Sbjct: 478 GKLNPTQYTIIRDGSLSHSFFILLFQVKLSDSGMFTCLAWNSLGSEASSAEVRVLELAPT 537
Query: 183 YEQLP 187
+ + P
Sbjct: 538 FRKHP 542
>gi|170044415|ref|XP_001849844.1| cell adhesion molecule [Culex quinquefasciatus]
gi|167867576|gb|EDS30959.1| cell adhesion molecule [Culex quinquefasciatus]
Length = 1218
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 209/464 (45%), Gaps = 28/464 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA GVP W NG+ + +T P R F+ N + L + D Y C A N
Sbjct: 304 CEATGVPKPNIIWIHNGKPI-EQTPP---NPRRFVSGNRIFFNKLE-KSDTGNYGCNATN 358
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
L Y L VL L P + P T + NVT+ C APKP+ W ++G +
Sbjct: 359 SLGYVYKDVYLNVLALPPEISEPPRREHTV--DRRNVTLTCRVFGAPKPEVKWIRNGREL 416
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+GGR ++ G+L I V D+G Y+C A N G + G LIV ++ P
Sbjct: 417 -TGGRYQVLPTGDLFIRGVEFSDAGQYTCNAVNKLGEKSADGELIVKEHTKIIDE-PQDY 474
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
+ A RC+A + L + W NG I D + + + + L IT
Sbjct: 475 EVVAGTPATFRCNAVADSSLALTIEWLTNGEPI---DF-DTQPRFVMTNDYSLTITKTIE 530
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
D G Y CV K+ + ++ T+ V P P ++ +E H+ AT+ WT N PI
Sbjct: 531 LDTGVYSCVAKTDLDEVIANATLTVYDRPNAPS-LEGIECHQAVATLSWTPNGDNRSPIL 589
Query: 311 HYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 369
HY I T++ TW S+ V + S++ + PWS Y F+VIA N++G
Sbjct: 590 HYTIEYNTSFTPDTWEISSKDVPATDF-------TYSVD--MSPWSNYTFRVIAINKVGP 640
Query: 370 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429
PS S T P++ P + G G + +L I W P+ + NAP Y+++W+
Sbjct: 641 SSPSGHSEVCTTQPSVPFKNPDNVEGQGTEPNNLVIKWTPMSEIEHNAPRFQYRVYWQLD 700
Query: 430 NDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ + +E + ++ + + P+ + Y +KV AIN++G
Sbjct: 701 TGVDNWNTEDIFDWQQTELVIRDQPT---FQRYRIKVVAINEMG 741
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 86/224 (38%), Gaps = 22/224 (9%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS------FKKRP-----LESETYAGEGGN 106
+ D Y C A + + Y VL +K + + RP A G
Sbjct: 148 QSDDFWYACAASSLFRNEYKIGNRVVLQVKQTGISAAQNRHRPERQYVSRKNEVALRGKK 207
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 163
+ +FC P P+ VW KDG I KI +N +L+I + +D G Y+C ++N
Sbjct: 208 IELFCIYGGTPLPQVVWTKDGRAIQWND--KIQQNNYGKSLVIKHATFEDQGTYTCESSN 265
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G ES + + Y+ P + A + RC A ++ IW HNG I
Sbjct: 266 GVGSAESYSIRLEVQAIPYFTTQPESVIKAEEETAEFRCEATGVPKPNI--IWIHNGKPI 323
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P + G + +D G Y C +++G +
Sbjct: 324 EQTPPN----PRRFVSGNRIFFNKLEKSDTGNYGCNATNSLGYV 363
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 65/166 (39%), Gaps = 21/166 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNS---ETLPLEDQDRYFIQDNVLTIRYLNPER 59
++ ++T TC FG P W RNG L + LP D FI+ +
Sbjct: 389 DRRNVTLTCRVFGAPKPEVKWIRNGRELTGGRYQVLPTGD---LFIRGVEFS-------- 437
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D Y C A N+L + + +L ++ P + E AG T CN A
Sbjct: 438 DAGQYTCNAVNKLGEKSADGEL-IVKEHTKIIDEPQDYEVVAGTPA--TFRCNAVADSSL 494
Query: 120 KFV--WKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTA 161
W +G I + R + + +L I+ D+G+YSC A
Sbjct: 495 ALTIEWLTNGEPIDFDTQPRFVMTNDYSLTITKTIELDTGVYSCVA 540
>gi|195049599|ref|XP_001992750.1| GH24930 [Drosophila grimshawi]
gi|193893591|gb|EDV92457.1| GH24930 [Drosophila grimshawi]
Length = 1298
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 221/470 (47%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
++ + C+A G P+ T W NG+ + SE P R + ++ + I L ++D Y
Sbjct: 354 EVVFNCKAAGHPEPTIQWIHNGKPIAQSEPNP-----RRTVTNSYIKIVNL-VKKDTGNY 407
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V L P ++ P ++ G N+T+ C APKP+ W+
Sbjct: 408 GCNATNSLGYVYKDVYLNVQALPPEIQEPPRAE--FSVNGRNITMKCRVFGAPKPQVKWR 465
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
++ N + +GGR + +G+L I V+ D+G Y+C A N G ++G L+V +
Sbjct: 466 QNNNWL-TGGRYTVLASGDLEIKDVAFADNGNYTCLAVNKFGNATAQGSLVVRER-TRIT 523
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ + L++ W +G N+D + E + + L
Sbjct: 524 QEPQNYEVAAGQSATFRCNEAHDPNLNLTIEWLKDG---QNIDF-DAEARFVKTNDNSLT 579
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 580 IAKTMELDSGEYTCVARTELDEATARANLIVQDVPNAPKLIGIT-CQDDKAEISWEPQGD 638
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W + V + S + PW+ Y ++VIA
Sbjct: 639 NRSPILHYTIQYNTSFTPASWDRAFDKVPSTDF---------SFVVQMSPWANYTYRVIA 689
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS S T + P++ P + G G + +L I W P+P + NAPN Y+
Sbjct: 690 FNKIGQSPPSGHSDACTTQPNVPFKNPENVVGQGTEPNNLVIEWTPMPEIEHNAPNFQYR 749
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ ++++ + ++ + + P+ + +Y +KV AIN+ G
Sbjct: 750 VSWKRDIPAAAWENKDIYDWRQSNLLIADQPT---FVKYHIKVVAINERG 796
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 115/283 (40%), Gaps = 37/283 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ Y W +NG+ + + +R Q ++ +P + D YQC A
Sbjct: 58 CEADGQPEPEYRWIKNGKPFDWQAY----DNRMSRQPGRGSLVITSPKDEDLGQYQCFAS 113
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKKDGN 128
N+ S++ +FK S A EG ++ C P+ PKP W +
Sbjct: 114 NEFGVATSNSVFVRKAELNAFKDEVARS-VEANEGDPFSLQCEAPDGWPKPTVNWLIQQS 172
Query: 129 IIGSG------GRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
IGSG R + G L S V+R+D+ Y+C+AT+V + G I+L
Sbjct: 173 -IGSGIKSINNSRMTLDPEGTLWFSNVTREDASDDFYYACSATSVFRNEYKIGNKILLDV 231
Query: 179 ---GPSYYE-QLPPKITIAAHRN--------LQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
G S + + PPK +N ++L C L +W +G R+
Sbjct: 232 KQMGVSASQNRHPPKRQYVTRKNEVALRGKRVELYCIYGGTPLPQT--VWYKDGQRVQWS 289
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
D + N G L I A+ DAG Y C V + VG +
Sbjct: 290 D--HITQGNY---GKSLVIRQANLNDAGTYNCDVSNGVGNAQS 327
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 88/241 (36%), Gaps = 36/241 (14%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVT 108
D Y C A + + Y +L +K P ++ A G V
Sbjct: 205 DDFYYACSATSVFRNEYKIGNKILLDVKQMGVSASQNRHPPKRQYVTRKNEVALRGKRVE 264
Query: 109 IFCNPEAAPKPKFVWKKDGNII--------GSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
++C P P+ VW KDG + G+ G+ + NL +D+G Y+C
Sbjct: 265 LYCIYGGTPLPQTVWYKDGQRVQWSDHITQGNYGKSLVIRQANL-------NDAGTYNCD 317
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTH 218
+N G +S + +H Y+ + P A + C A H E + W H
Sbjct: 318 VSNGVGNAQSYSINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTIQ----WIH 373
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
NG I + N P + ++I N D G Y C +++G + + V+
Sbjct: 374 NGKPIAQSEPN----PRRTVTNSYIKIVNLVKKDTGNYGCNATNSLGYVYKDVYLNVQAL 429
Query: 279 P 279
P
Sbjct: 430 P 430
>gi|301779003|ref|XP_002924918.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Ailuropoda melanoleuca]
Length = 1225
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 220/482 (45%), Gaps = 39/482 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG ++ + + ++ L P A+YQC A N
Sbjct: 368 CEAEGEPEPTIKWRVNGSPIDRNPFAGD-----VVSPREISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + + C A+P+ W+K
Sbjct: 422 VHGTILANANIDVVDVRPLIQTE--DEENYATVAGYSAFLHCEFFASPEAIVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR ++ENG L I+ + DD+G YSC N G L + + + + P
Sbjct: 480 KPLEGRRYHVYENGTLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIRNA-TKLQVAPK 538
Query: 189 KITIAAHRNLQLRCSA----HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ L+L C + H ++ L ++ W+ NG ++N E I IDG L
Sbjct: 539 NPRVPRLHALELHCESTCDPHLKQSLKLS--WSRNGEA---FEINATEDGRIIIDGANLT 593
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + D G Y C ++ + ++ T V V P P +Q+ E S + W G
Sbjct: 594 ISNVTSEDQGIYSCSAQTALDSVTDATQVTVLDVPDPPESLQLSERQNRSVRLTWEAGDD 653
Query: 305 NGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ I+ Y + N W +E+ R G KE +I L P+ Y+F+VI
Sbjct: 654 HNSHISDYIVEFEGNKEEPGRW---------EELARVQG-KETTITLSLAPYVRYQFRVI 703
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y
Sbjct: 704 AVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 763
Query: 423 KIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE + V
Sbjct: 764 RVSWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINHLGSGPEPQSVI 817
Query: 482 IW 483
++
Sbjct: 818 LY 819
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P P+ W K G + G K + L I VS D G
Sbjct: 263 ESSVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYSKTLKIENVSYRDRG 322
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
Y CTA N G +IV P + ++
Sbjct: 323 NYRCTANNFLGSTTHDFHVIVEEPPRWTKK 352
>gi|281350365|gb|EFB25949.1| hypothetical protein PANDA_014328 [Ailuropoda melanoleuca]
Length = 1195
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 220/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG ++ + + ++ L P A+YQC A N
Sbjct: 338 CEAEGEPEPTIKWRVNGSPIDRNPFAGD-----VVSPREISFTNLQPNHT-AVYQCEASN 391
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + + C A+P+ W+K
Sbjct: 392 VHGTILANANIDVVDVRPLIQTE--DEENYATVAGYSAFLHCEFFASPEAIVSWQKVEEA 449
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR ++ENG L I+ + DD+G YSC N G L + + + + P
Sbjct: 450 KPLEGRRYHVYENGTLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIRNA-TKLQVAPK 508
Query: 189 KITIAAHRNLQLRCSA----HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ L+L C + H ++ L ++ W+ NG ++N E I IDG L
Sbjct: 509 NPRVPRLHALELHCESTCDPHLKQSLKLS--WSRNGEA---FEINATEDGRIIIDGANLT 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + D G Y C ++ + ++ T V V P P +Q+ E S + W G
Sbjct: 564 ISNVTSEDQGIYSCSAQTALDSVTDATQVTVLDVPDPPESLQLSERQNRSVRLTWEAGDD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
+ I+ Y + N E +E+ R G KE +I L P+ Y+F+VIA
Sbjct: 624 HNSHISDYIVEFEGN-------KEEPGRWEELARVQG-KETTITLSLAPYVRYQFRVIAV 675
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 676 NEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 735
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE + V ++
Sbjct: 736 SWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINHLGSGPEPQSVILY 789
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P P+ W K G + G K + L I VS D G
Sbjct: 233 ESSVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYSKTLKIENVSYRDRG 292
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
Y CTA N G +IV P + ++
Sbjct: 293 NYRCTANNFLGSTTHDFHVIVEEPPRWTKK 322
>gi|350399166|ref|XP_003485439.1| PREDICTED: neuroglian-like isoform 2 [Bombus impatiens]
Length = 1247
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 217/470 (46%), Gaps = 32/470 (6%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + C A GVP W NG+ + SE P R + N + I L ++D Y C
Sbjct: 350 VEFKCAANGVPVPEIKWIHNGKPI-SEAPP---NPRRKVTPNSIIIEKLT-KKDTGNYGC 404
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL L+P + P + T +G V I C APKP W ++
Sbjct: 405 NATNSLGYVYKDVYVNVLALEPEITQPPADIATV--DGKIVRITCRVFGAPKPAVKWIRN 462
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + +GGR K ++G+L I V D+G Y+C A+N G E+ G L V ++
Sbjct: 463 GQEL-TGGRYKTLDSGDLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVKEHTRITDE- 520
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AA RC+A T+ L + W NG I D E+E I L IT
Sbjct: 521 PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMIT 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ D G Y CV + + + + T++V+ P P V V T+ATI WT N
Sbjct: 577 KTTELDTGTYTCVAHTELDEAKAQATLVVQDVPNPPKLVSV-NCAGTTATIHWTPMGDNR 635
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PI Y I T++ + +S+ + E + + + PW+ Y F+V+A N+
Sbjct: 636 APILRYTIQHNTSFTPDTWEISKDPVPS--------TEQTYDVPMSPWANYTFRVLAWNK 687
Query: 367 LGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
+G PS PSP + T D P+ P + G G +L ISW +P+ + NAP Y+
Sbjct: 688 IG---PSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYR 744
Query: 424 IFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+++R+ E + E + ++ + V P+ Y Y++KV AIN+ G
Sbjct: 745 VYYRRDIPGEKWTIEDIHDWKKNSLVVDNQPT---YQRYKIKVVAINERG 791
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 18/224 (8%)
Query: 56 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS-----------FKKRPLESETYAGEG 104
N D Y C A + + Y +L + S K+ A G
Sbjct: 196 NDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSRKNEVALRG 255
Query: 105 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATN 163
+ ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C A+N
Sbjct: 256 KKIELYCIHGGTPLPQIVWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASN 315
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G +S + + Y+ P I A ++ +C+A+ + ++ W HNG I
Sbjct: 316 GVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK--WIHNGKPI 373
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P + + I + D G Y C +++G +
Sbjct: 374 SEAPPN----PRRKVTPNSIIIEKLTKKDTGNYGCNATNSLGYV 413
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 111/287 (38%), Gaps = 36/287 (12%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N CEA G P Y W +NG+ P D DR Q T+ P + D
Sbjct: 45 ENDKPFLIECEAEGEPAPRYRWIKNGKNFE---WPAYD-DRISQQPGRGTLVISRPRDED 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCN-PEAAPK 118
YQC A+N+ S++ SFK + P+ + A EG + C P+ PK
Sbjct: 101 LGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLD--ANEGQPFKLTCQPPDGWPK 158
Query: 119 PKFVWKKDGNIIG----SGGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESK 171
P W G + R + GNL S V+R+D+ Y+C AT+V +
Sbjct: 159 PNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVFRNEYKL 218
Query: 172 GRLIVLH------GPSYYEQLPPKITIAAHRNLQLR-------CSAHTEELLDVAYIWTH 218
G ++L+ S + P K ++ + LR C L + +W+
Sbjct: 219 GNRVLLNVISSGISASQNKYEPVKQYVSRKNEVALRGKKIELYCIHGGTPLPQI--VWSK 276
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
NG I D + N G L I + + D G Y C + VG
Sbjct: 277 NGEVIKTND--RIMQGNY---GKSLIIKHVNSKDEGTYTCEASNGVG 318
>gi|47222082|emb|CAG12108.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1193
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 205/442 (46%), Gaps = 37/442 (8%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D MYQC A+N +Y++A+LRV+ P+F+ P++ + V I C P AAP+P
Sbjct: 436 DSGMYQCVAENYWGIKYANAELRVIAFAPTFELNPVKKQLLGARDRRVVIECKPRAAPRP 495
Query: 120 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
+F W K ++ + R I +G+L I ++DD G+Y+C A N G S G L +
Sbjct: 496 QFTWTKGKELLFNNSRLSILYDGSLEILSATKDDEGVYTCLAENGRGRANSSGYLTITEA 555
Query: 180 PSYYEQLPPKITIAAHRN-------LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
IT+A + + LRC+A + LD+ +IW + R+ + D
Sbjct: 556 TG--------ITVAPEDSEAKVGDEVVLRCAASFDPTLDITFIWAID-FRVIDFDSEWQH 606
Query: 233 TPNINIDGGL--LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
+ D G L+I N G Y C ++ V + + V G PG PG ++V E+
Sbjct: 607 YERLWRDDGSGDLKIKNVQIWHEGRYTCTAQTVVDSDTAYADLKVVGVPGPPGVIRVEEI 666
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWN---STWFNVSEHVIGKEVDRYTGRKEASI 347
T + WT GA + PI ++ I R W+ W N S T E +
Sbjct: 667 GNTWVKLLWTKGADHNSPILYHTIQTRHYWSLNEDDWRNAS-----------TCSVERAE 715
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L PW Y+F++IA NE G GE S PS + T P +P+ + G GG+ G++ I+W
Sbjct: 716 VTDLYPWLEYQFRIIATNEHGSGEASIPSLKVKTWDAAPAVSPTDVAGYGGRNGEIVITW 775
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIAVVRIPSEFYYTEYE 462
P+ + Y + ++ + ++ ET+ + Y + + +F E++
Sbjct: 776 TPVEPWHFYGKSFGYIVAFKPHDAYDWLYETISDPETRRYVHRDSYFIPTEEDFQVREFQ 835
Query: 463 VKVQAINDVGPGPESEVVTIWH 484
VK+++ N G GP S I++
Sbjct: 836 VKIKSFNVKGDGPYSLTKVIYY 857
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 9/164 (5%)
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
KP+F K I S + G L S ++ DSG+Y C A N G+ + L V+
Sbjct: 404 KPRF---KQTCQIPSAACVSQYGKGELQFSSLTFADSGMYQCVAENYWGIKYANAELRVI 460
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+E P K + R+ ++ + WT G L +I
Sbjct: 461 AFAPTFELNPVKKQLLGARDRRVVIECKPRAAPRPQFTWTK-----GKELLFNNSRLSIL 515
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
DG LEI +A+ D G Y C+ ++ G+ ++ + + G+
Sbjct: 516 YDGS-LEILSATKDDEGVYTCLAENGRGRANSSGYLTITEATGI 558
>gi|350399162|ref|XP_003485438.1| PREDICTED: neuroglian-like isoform 1 [Bombus impatiens]
Length = 1251
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 217/470 (46%), Gaps = 32/470 (6%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + C A GVP W NG+ + SE P R + N + I L ++D Y C
Sbjct: 350 VEFKCAANGVPVPEIKWIHNGKPI-SEAPP---NPRRKVTPNSIIIEKLT-KKDTGNYGC 404
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL L+P + P + T +G V I C APKP W ++
Sbjct: 405 NATNSLGYVYKDVYVNVLALEPEITQPPADIATV--DGKIVRITCRVFGAPKPAVKWIRN 462
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + +GGR K ++G+L I V D+G Y+C A+N G E+ G L V ++
Sbjct: 463 GQEL-TGGRYKTLDSGDLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVKEHTRITDE- 520
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AA RC+A T+ L + W NG I D E+E I L IT
Sbjct: 521 PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMIT 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ D G Y CV + + + + T++V+ P P V V T+ATI WT N
Sbjct: 577 KTTELDTGTYTCVAHTELDEAKAQATLVVQDVPNPPKLVSV-NCAGTTATIHWTPMGDNR 635
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PI Y I T++ + +S+ + E + + + PW+ Y F+V+A N+
Sbjct: 636 APILRYTIQHNTSFTPDTWEISKDPVPS--------TEQTYDVPMSPWANYTFRVLAWNK 687
Query: 367 LGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
+G PS PSP + T D P+ P + G G +L ISW +P+ + NAP Y+
Sbjct: 688 IG---PSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYR 744
Query: 424 IFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+++R+ E + E + ++ + V P+ Y Y++KV AIN+ G
Sbjct: 745 VYYRRDIPGEKWTIEDIHDWKKNSLVVDNQPT---YQRYKIKVVAINERG 791
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 18/224 (8%)
Query: 56 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS-----------FKKRPLESETYAGEG 104
N D Y C A + + Y +L + S K+ A G
Sbjct: 196 NDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSRKNEVALRG 255
Query: 105 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATN 163
+ ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C A+N
Sbjct: 256 KKIELYCIHGGTPLPQIVWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASN 315
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G +S + + Y+ P I A ++ +C+A+ + ++ W HNG I
Sbjct: 316 GVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK--WIHNGKPI 373
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P + + I + D G Y C +++G +
Sbjct: 374 SEAPPN----PRRKVTPNSIIIEKLTKKDTGNYGCNATNSLGYV 413
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 111/287 (38%), Gaps = 36/287 (12%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N CEA G P Y W +NG+ P D DR Q T+ P + D
Sbjct: 45 ENDKPFLIECEAEGEPAPRYRWIKNGKNFE---WPAYD-DRISQQPGRGTLVISRPRDED 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCN-PEAAPK 118
YQC A+N+ S++ SFK + P+ + A EG + C P+ PK
Sbjct: 101 LGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLD--ANEGQPFKLTCQPPDGWPK 158
Query: 119 PKFVWKKDGNIIG----SGGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESK 171
P W G + R + GNL S V+R+D+ Y+C AT+V +
Sbjct: 159 PNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVFRNEYKL 218
Query: 172 GRLIVLH------GPSYYEQLPPKITIAAHRNLQLR-------CSAHTEELLDVAYIWTH 218
G ++L+ S + P K ++ + LR C L + +W+
Sbjct: 219 GNRVLLNVISSGISASQNKYEPVKQYVSRKNEVALRGKKIELYCIHGGTPLPQI--VWSK 276
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
NG I D + N G L I + + D G Y C + VG
Sbjct: 277 NGEVIKTND--RIMQGNY---GKSLIIKHVNSKDEGTYTCEASNGVG 318
>gi|410900131|ref|XP_003963550.1| PREDICTED: neurofascin-like [Takifugu rubripes]
Length = 1147
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 214/480 (44%), Gaps = 31/480 (6%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D C + G P T +WF NGE +S TL Q + L +R + + A+
Sbjct: 339 EEDGRMVCRSDGAPRPTITWFINGEPTDSSTL----QPNVEVSGETLVLRSVTTLNN-AV 393
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A NQ ++A + VL P E EG + C +P P+ W
Sbjct: 394 YQCNASNQYGYLLANAFVNVLHATPRILGSRNEYLKII-EGSRAFLDCRFFGSPVPELRW 452
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K G G R K NG L I + D G Y C +NV G DE++ I + P+
Sbjct: 453 SKYGQGNLEGNRFKTHSNGTLEIKSIEVVDQGTYLCVVSNVAGRDENQVH-IEVKEPTVI 511
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
P I + +++ C+ T+ V W G + + I++D L
Sbjct: 512 VTRPTDIKVIRGTDVRFECAVKTDATTPVTTTWL-KGTKPVTLGWR------ISMDESNL 564
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N + AD+G Y C+V++ + S ++V P P +++ E H+ S + W G
Sbjct: 565 VIGNTNPADSGNYTCLVQTELEHKSASAHLMVMDRPDPPTDLELSEPHERSVRLSWVPGN 624
Query: 304 TNGRPITHYKI-IARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
+N PIT Y + +W W N+S Y G S+ L+P++ YEF+V
Sbjct: 625 SNHNPITDYLVQYDDDDWLPGKWKNLS---------LYPGDLN-SVTLHLLPFTYYEFRV 674
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
IA NE+G PS S ++ + P P + G G ++ ISWEPL + N P++
Sbjct: 675 IAINEIGMSRPSRRSTRFQSSGAPPDVIPKNLKGVGTWRNNMEISWEPLAYREWNGPHLK 734
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
Y ++WR+++ E ++ I +T YE+K+QA+ND G GPES VVT
Sbjct: 735 YLVWWRRRDSREEWKNATTKWSKYYIYDADT-----FTPYELKIQAVNDFGLGPESPVVT 789
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L C A GVP +W ++GE L + P++ ++ + ++ I + E D Y
Sbjct: 250 ELLIECIAAGVPTPRITWRKDGEDLVVRS-PMKVKNF----NKMIQIPKASFE-DAGEYV 303
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+L + ++V P + +RP + E G + C + AP+P W
Sbjct: 304 CTAENKLGYIEHTITVQV-KAAPFWLERPGDLVLAPEEDGR--MVCRSDGAPRPTITWFI 360
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G S + E L++ V+ ++ +Y C A+N +G + + VLH
Sbjct: 361 NGEPTDSSTLQPNVEVSGETLVLRSVTTLNNAVYQCNASNQYGYLLANAFVNVLHA---- 416
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
P+I RN L+ + LD + W+ G GN++ N +T +
Sbjct: 417 ---TPRIL--GSRNEYLKIIEGSRAFLDCRFFGSPVPELRWSKYGQ--GNLEGNRFKTHS 469
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI + D G Y CVV + G+ + + V+ P
Sbjct: 470 ----NGTLEIKSIEVVDQGTYLCVVSNVAGRDENQVHIEVKEP 508
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 121/294 (41%), Gaps = 25/294 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + + CEA G P +SW RNG N P R+ ++ + NPE+
Sbjct: 42 VDAKDTMVIECEAKGNPHPIFSWRRNGRYYNVARDPQASMRRHSGTLDIYA--WNNPEQY 99
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
A YQC A N + YS+ ++R+ + R + G + + C+ P PKP
Sbjct: 100 EAEYQCVASNMYGSAYSN-KIRLRLYRAPVWPREIIEPVVISAGLPLVLSCDPPPGPPKP 158
Query: 120 KFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGI-YSCTA-TNVHGMDESKGRLI- 175
+ W RR + NG+L S V +DS Y C A + + K ++
Sbjct: 159 ETYWMSSCKWPVRQDRRVSMGVNGDLYFSNVLFNDSAADYCCNARLPYRNVIQQKMPVVV 218
Query: 176 -VLHGPSYYEQLP----PK-----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
VL S E P PK I + L + C A + W +G +
Sbjct: 219 KVLTTRSVVESTPSWLSPKGSSSTILVLLGEELLIECIAAGVPTPRIT--WRKDGEDL-- 274
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ + ++ N N +++I ASF DAGEY C ++ +G I TV V+ P
Sbjct: 275 VVRSPMKVKNFN---KMIQIPKASFEDAGEYVCTAENKLGYIEHTITVQVKAAP 325
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 161
G + I C P P+ W+KDG ++ S + K F N + I S +D+G Y CTA
Sbjct: 248 GEELLIECIAAGVPTPRITWRKDGEDLVVRSPMKVKNF-NKMIQIPKASFEDAGEYVCTA 306
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G E + V P + E+ P + +A + ++ C + + W NG
Sbjct: 307 ENKLGYIEHTITVQVKAAPFWLER-PGDLVLAPEEDGRMVCRSDGAPRPTIT--WFINGE 363
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ L PN+ + G L + + + + Y+C + G + V ++ P
Sbjct: 364 PTDSSTLQ----PNVEVSGETLVLRSVTTLNNAVYQCNASNQYGYLLANAFVNVLHATPR 419
Query: 281 LPGG 284
+ G
Sbjct: 420 ILGS 423
>gi|74183690|dbj|BAE24464.1| unnamed protein product [Mus musculus]
Length = 585
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 184/379 (48%), Gaps = 12/379 (3%)
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK ++ R +G L I V++ D+G Y+CTA N G L+V P+
Sbjct: 1 KKGDMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTE-PTRI 59
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + +A ++ L C + LLD+ + W NG D + E + G L
Sbjct: 60 ILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDL 119
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
+ I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + WT+G
Sbjct: 120 M-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEG 178
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ P+ Y + ART ++ W +V + + +D G+ + L PW YEF+++
Sbjct: 179 TDSHSPVISYAVQARTPFSVGWQSV--RTVPEVID---GKTHTATVVELNPWVEYEFRIV 233
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y
Sbjct: 234 ASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGY 293
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + + N V R S ++ YEVKV N+ G GP S V T+
Sbjct: 294 VVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTV 352
Query: 483 W---HDPLVIISYVCQGDL 498
+ +P V S++ L
Sbjct: 353 FSAEEEPTVAPSHISAHSL 371
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 175/477 (36%), Gaps = 61/477 (12%)
Query: 35 LPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR 93
+ + +Q R F+ D L I + + D Y C A+NQ + L V+T
Sbjct: 5 MMVREQARVSFLNDGGLKIMNVT-KADAGTYTCTAENQFGKANGTTHL-VVTEPTRIILA 62
Query: 94 PLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE------NGNLL 145
P + GE +V + C + P F W +G + FE +G+L+
Sbjct: 63 PSNMDVAVGE--SVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDLM 120
Query: 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 205
I + SG Y C S LIV P E + K+ QL +
Sbjct: 121 IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDEITDTTAQLSWTEG 178
Query: 206 TEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVK 261
T+ V + +G + + P + IDG T EYE V
Sbjct: 179 TDSHSPVISYAVQARTPFSVGWQSVRTV--PEV-IDGKTHTATVVELNPWVEYEFRIVAS 235
Query: 262 STVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATN 305
+ +G K+ T+ P + GG ++ I W +G
Sbjct: 236 NKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGG----SRSELVITWDPVPEELQNGGGF 291
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
G + ++ + T W + V + RY R E+ +VP+S YE KV N
Sbjct: 292 GY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IVPFSPYEVKVGVYN 339
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
G G P SP + ++P APS I ++ +SW +P + N + Y++
Sbjct: 340 NKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSNGHLLGYEVR 398
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
+ E S +K GN AV+R + S YYT V+A N G GP S V
Sbjct: 399 YWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYT----AVRAYNSAGAGPFSATV 451
>gi|417406036|gb|JAA49700.1| Putative neural cell adhesion molecule l1-like protein isoform 3
[Desmodus rotundus]
Length = 1170
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 221/482 (45%), Gaps = 39/482 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV----LTIRYLNPERDPAMYQC 66
CEA G P T W NG LP+E+ F D + ++ L P A+YQC
Sbjct: 367 CEAEGEPKPTIRWRVNG-------LPIEENP--FAGDVIFPGEVSFTNLQPNHS-AVYQC 416
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKFVWKK 125
A N T ++A + V+ + P + + E YA G +V++ C+ A+P+ W +
Sbjct: 417 EASNAHGTILATANIDVIDISPLIQTD--DGEDYAAVVGSSVSLHCDFFASPQAVVSWLR 474
Query: 126 DGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ G R ++F+NG L +S + +D+G Y+C N G L + +
Sbjct: 475 VEELRPIEGPRYRVFDNGTLQVSRATEEDAGSYTCWVENAKGKTAVTASLDIRKA-TTVR 533
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
P + L+LRC++ + L + W+ +G + N E + +DG
Sbjct: 534 VSPENPRVPRSHTLELRCASRCDPHLGPSLTLAWSKDG---DALQTNGTEDGRVVLDGAR 590
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I+N + D G Y C ++T+ ++ +T V V P P +++ E S + W G
Sbjct: 591 LTISNVTPEDQGVYSCAARTTLDSVADETRVTVLDVPDPPENLRLSERQNRSVRLAWDAG 650
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ IT Y + + + + V+ E S+ L P+ Y F+V+
Sbjct: 651 DDHNSNITEYVVEFEGDKEAPGRWATLTVVSGE--------GTSVLLPLAPYVRYRFRVV 702
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G PS PS + TP P + P I + ++ I WEPL +QN P + Y
Sbjct: 703 AVNEVGRSRPSRPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKPMEQNGPGLEY 762
Query: 423 KIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
++ WR + E++ ET++E+ +R+ + Y Y+V+VQA+N +G GPE + VT
Sbjct: 763 RVAWRPQGAPVEWEEETVREHS------LRVMTPAVYAPYDVQVQAVNRLGAGPEPQSVT 816
Query: 482 IW 483
++
Sbjct: 817 LY 818
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 192/509 (37%), Gaps = 69/509 (13%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+ ++ C+ F P SW R EL P+E RY + DN E D Y
Sbjct: 454 SSVSLHCDFFASPQAVVSWLRVEELR-----PIEGP-RYRVFDNGTLQVSRATEEDAGSY 507
Query: 65 QCRAKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C +N +A L + + + P + P S T + C+P P
Sbjct: 508 TCWVENAKGKTAVTASLDIRKATTVRVSPENPRVP-RSHTLELRCAS---RCDPHLGPSL 563
Query: 120 KFVWKKDGNIIGSGGR---RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W KDG+ + + G R + + L IS V+ +D G+YSC A + R+ V
Sbjct: 564 TLAWSKDGDALQTNGTEDGRVVLDGARLTISNVTPEDQGVYSCAARTTLDSVADETRVTV 623
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPN 235
L P E L +++ +R+++L A + ++ Y+ G + L
Sbjct: 624 LDVPDPPENL--RLSERQNRSVRLAWDAGDDHNSNITEYVVEFEGDKEAPGRWATLTV-- 679
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEV 290
++ +G + + A + + V + VG+ ++ + E PP P ++V
Sbjct: 680 VSGEGTSVLLPLAPYVRY-RFRVVAVNEVGRSRPSRPSDHHETPPAAPDKNPQNIRVQAS 738
Query: 291 HKTSATIQW---TDGATNGRPITHYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTGR 342
I+W NG P Y++ R W V EH +
Sbjct: 739 QPKEMIIKWEPLKPMEQNG-PGLEYRVAWRPQGAPVEWEEE--TVREHSL---------- 785
Query: 343 KEASIENVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGG 397
V+ P ++ Y+ +V A N LG G P PQ T D P AP G
Sbjct: 786 ------RVMTPAVYAPYDVQVQAVNRLGAG----PEPQSVTLYSGEDYPDAAPVIQGVDV 835
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IP 453
+ ++W +P+++ + Y++ W K KE + A R +P
Sbjct: 836 VNSTLVRVTWSSVPKDRVHGQLKGYQVTWWKTRSLLDGRPLPKEASVLRFAGQRGSGMLP 895
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEVVTI 482
S ++E+ + V A N G GPESE T
Sbjct: 896 SLEAFSEFRLTVLAYNSKGAGPESEPYTF 924
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 64/172 (37%), Gaps = 8/172 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G + + C E P P+ WKK G + G K L I VS +D G Y CTATN
Sbjct: 270 GDTLLLECFAEGLPTPQIEWKKMGGDLPKGRETKENYGKMLKIEKVSDEDRGRYRCTATN 329
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P + ++ P + ++ L C A E + + R+
Sbjct: 330 SLGSATHDFHVTVEEPPRWVKK-PQSGVYSTGTSVILLCEAEGEPKPTIRW-------RV 381
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ + E I G + TN + Y+C + G I + V
Sbjct: 382 NGLPIEENPFAGDVIFPGEVSFTNLQPNHSAVYQCEASNAHGTILATANIDV 433
>gi|391347861|ref|XP_003748172.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Metaseiulus
occidentalis]
Length = 1257
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 220/482 (45%), Gaps = 53/482 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAM 63
+T+ C A GVP+ WF NG +P+E R +Q N LTI L ++D A+
Sbjct: 352 VTFECNATGVPEPKLQWFVNG-------MPIEKAPASPRRKLQGNFLTIERLE-KKDTAV 403
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+QC A N L + L VL L PS + P E T A G + C APKP W
Sbjct: 404 FQCNASNPLGYAFKDFYLNVLALPPSIIEAP-EQVTQAVVGSTAILKCRVFGAPKPTVKW 462
Query: 124 KKDG--NIIG----SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
K +I G +GGR K+ ++G+L I+ V D+G Y+C A+N G + G L V
Sbjct: 463 IKTNAHSITGGRELTGGRYKVLDSGDLQINEVLVTDNGEYTCQASNKFGDTSASGTLDV- 521
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
++ + RC+A + LD+ W N I D E + I
Sbjct: 522 ----------KELXGGRGESAVFRCNAQADPTLDLTINWLFNDELI---DF-ERDPRMIK 567
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L IT D+G Y CV K+ + K + T+ V+ P P V+V + +A +
Sbjct: 568 ASDNSLTITRTLELDSGRYTCVAKTELDKDTASATLTVQDVPNSPSIVKVT-CDQYTALV 626
Query: 298 QWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+W PI Y I T++ TW + ++ + + + PW+
Sbjct: 627 EWKPNGDRRAPILSYTIQYNTSFAPDTWEDAFANIPAPDT---------RFKVSMSPWAN 677
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F+VIA N++G PS S + T P++ P ++ G G + +L ISW P+P + N
Sbjct: 678 YTFRVIARNKIGPSPPSETSMRCTTAESIPHKNPDKVAGRGTQKDNLVISWTPMPPIEHN 737
Query: 417 APNIYYKIFWRKK------NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
AP +Y++ +++K +++ + +E ++++ IA +P + Y +KV+A N
Sbjct: 738 APGFFYRVKYKRKDTENTADESSWITEDIQDWRQGSIAKYGMP---VFKPYRIKVEAHNR 794
Query: 471 VG 472
G
Sbjct: 795 RG 796
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 111/281 (39%), Gaps = 42/281 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
CEA G P+ Y W +NG + + + R Q T+ + P+ D +YQC+A
Sbjct: 56 CEAEGTPEPEYEWIKNGRVFDYVSY----DKRISKQPKRGTLIFTKPDDVDEGLYQCKAT 111
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKKDGN 128
NQ T S+A + +F + E + EG +++ C P+ P P W
Sbjct: 112 NQYGTSVSNAVFLRKSELSNFADDKTQ-EIFVMEGEPLSLDCKPPQGYPAPSVFW----- 165
Query: 129 IIGSG-GRRKIFEN--------GNLLISPVSRDDS---GIYSCTATNVHGMDESKGRLIV 176
+I SG G + F + G L S V R DS +Y+C+AT+ + G +V
Sbjct: 166 LIQSGNGALRSFNSSRITADPEGKLHFSQVLRADSLADAVYTCSATSHFRREYKIGNKVV 225
Query: 177 LH------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L P + P+ + +L C L + WT G
Sbjct: 226 LKVEPKSSTGKTEVPPVHQYTSGPQQDPLRGKRHELHCIFGGTPLPQIR--WTKKGTS-S 282
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ N +ET N G L I + F D G YEC + VG
Sbjct: 283 LENSNRVETVNY---GKTLVIKSPDFEDEGVYECTASNGVG 320
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 80/216 (37%), Gaps = 18/216 (8%)
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR-----PLESETYAGE-----GGNVTIFC 111
A+Y C A + + Y VL ++P P+ T + G + C
Sbjct: 204 AVYTCSATSHFRREYKIGNKVVLKVEPKSSTGKTEVPPVHQYTSGPQQDPLRGKRHELHC 263
Query: 112 NPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGN-LLISPVSRDDSGIYSCTATNVHGMDE 169
P P+ W K G + + + R + G L+I +D G+Y CTA+N G +
Sbjct: 264 IFGGTPLPQIRWTKKGTSSLENSNRVETVNYGKTLVIKSPDFEDEGVYECTASNGVGPPK 323
Query: 170 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
S + + Y+ + P K A + C+A + + W NG+ I
Sbjct: 324 SHSMNVKIKAAPYWVKAPEKKDAAEEETVTFECNATG--VPEPKLQWFVNGMPIEKAPA- 380
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+P + G L I D ++C + +G
Sbjct: 381 ---SPRRKLQGNFLTIERLEKKDTAVFQCNASNPLG 413
>gi|340714433|ref|XP_003395733.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Bombus terrestris]
Length = 1251
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 217/470 (46%), Gaps = 32/470 (6%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + C A GVP W NG+ + SE P R + N + I L ++D Y C
Sbjct: 350 VEFKCAANGVPVPEIKWIHNGKPI-SEAPP---NPRRKVTPNSIIIEKLT-KKDTGNYGC 404
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L Y + VL L+P + P + T +G V I C APKP W ++
Sbjct: 405 NATNSLGYVYKDVYVNVLALEPEITQPPADIATV--DGKIVRITCRVFGAPKPAVKWIRN 462
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + +GGR K ++G+L I V D+G Y+C A+N G E+ G L V ++
Sbjct: 463 GQEL-TGGRYKTLDSGDLEIENVIFLDAGTYTCHASNKFGEIEASGNLAVKEHTRITDE- 520
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P +AA RC+A T+ L + W NG I D E+E I L IT
Sbjct: 521 PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEPI---DF-EMEPRFIRSTDYSLMIT 576
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ D G Y CV + + + + T++V+ P P V V ++ATI WT N
Sbjct: 577 KTTELDTGTYTCVAHTELDEAKAQATLVVQDVPNPPKLVSV-NCAGSTATIHWTPMGDNR 635
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PI Y I T++ + +S+ + E + + + PW+ Y F+V+A N+
Sbjct: 636 APILRYTIQHNTSFTPDTWEISKDPVPS--------TEQTYDVPMSPWANYTFRVLAWNK 687
Query: 367 LGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
+G PS PSP + T D P+ P + G G +L ISW +P+ + NAP Y+
Sbjct: 688 IG---PSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQNLVISWTVMPQIEHNAPKFMYR 744
Query: 424 IFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+++R+ E + E + ++ + V P+ Y Y++KV AIN+ G
Sbjct: 745 VYYRRDIPGEKWTIEDIHDWKKNNLVVDNQPT---YQRYKIKVVAINERG 791
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 18/224 (8%)
Query: 56 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS-----------FKKRPLESETYAGEG 104
N D Y C A + + Y +L + S K+ A G
Sbjct: 196 NDASDDFYYACAATSVFRNEYKLGNRVLLNVISSGISASQNKYEPVKQYVSXKNEVALRG 255
Query: 105 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATN 163
++C P P+ VW K+G +I + R G +L+I V+ D G Y+C A+N
Sbjct: 256 KKXELYCIHGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNSKDEGTYTCEASN 315
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G +S + + Y+ P I A ++ +C+A+ + ++ W HNG I
Sbjct: 316 GVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK--WIHNGKPI 373
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P + + I + D G Y C +++G +
Sbjct: 374 SEAPPN----PRRKVTPNSIIIEKLTKKDTGNYGCNATNSLGYV 413
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 111/287 (38%), Gaps = 36/287 (12%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERD 60
+N CEA G P Y W +NG+ P D DR Q T+ P + D
Sbjct: 45 ENDKPFLIECEAEGEPAPRYRWIKNGKNFE---WPAYD-DRISQQPGRGTLVISRPRDED 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCN-PEAAPK 118
YQC A+N+ S++ SFK + P+ + A EG + C P+ PK
Sbjct: 101 LGQYQCFAENEWGIATSNSVFVRKAELNSFKDQNPISLD--ANEGQPFKLTCQPPDGWPK 158
Query: 119 PKFVWKKDGNIIG----SGGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESK 171
P W G + R + GNL S V+R+D+ Y+C AT+V +
Sbjct: 159 PNVYWLIQDTAGGIKSINNSRMTLDPEGNLWFSNVTRNDASDDFYYACAATSVFRNEYKL 218
Query: 172 GRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTH 218
G ++L+ S + P K ++ + LR EL + +W+
Sbjct: 219 GNRVLLNVISSGISASQNKYEPVKQYVSXKNEVALR--GKKXELYCIHGGTPLPQIVWSK 276
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
NG I D + N G L I + + D G Y C + VG
Sbjct: 277 NGEVIRTND--RIMQGNY---GKSLIIKHVNSKDEGTYTCEASNGVG 318
>gi|1708635|gb|AAC47451.1| neuroglian [Manduca sexta]
Length = 1264
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 213/464 (45%), Gaps = 28/464 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P +W NG+ + E R + N + I L ++D Y C A +
Sbjct: 355 CEAGGTPVPKITWIHNGKPIEQ----AEPNPRRQVTANSIVITDL-VKKDTGNYGCNATS 409
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ Y + V ++ P K+ P E+ T +G + C APKP W +D ++
Sbjct: 410 SIGYVYKDVYINVQSIPPEIKEGP-ENLTKV-DGSEAVLKCRVFGAPKPIVKWMRD-DVD 466
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+GG+ I G+L+I VS D G Y C A N G + G L V ++ P
Sbjct: 467 ITGGKYNITSEGDLVIRDVSFTDVGTYQCYAKNKFGEKSAFGSLAVKKRTVITDK-PEDY 525
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
+AA + RC+A+ ++ L + +W ++G I D + D LL I++ +
Sbjct: 526 EVAAGSSATFRCNANADDSLKLTIVWLNDGQLI---DFENQPRFRMTNDYSLL-ISDTTE 581
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
D+G+Y C+ K+ + + + T+ V+ P P + VE +AT++W N P+
Sbjct: 582 LDSGQYTCIAKTAIDEARAQATLTVQDKPN-PPALDGVECGAATATLRWRSMGDNRAPVV 640
Query: 311 HYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 369
Y+I T++ +W ++HV + S L PW+ Y F+VIA N++G
Sbjct: 641 RYQIHYNTSFTPDSWAAAADHVPAIDT---------SWTVQLSPWANYTFRVIAVNKIGP 691
Query: 370 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429
PSS S T D PY+ P + G G ++ ISW +P+ + N P YY + WR+
Sbjct: 692 SSPSSHSDVCTTQPDVPYKNPDNVKGEGSDPTNMVISWSKMPQIEHNGPGFYYLVSWRRN 751
Query: 430 -NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
E+ E ++++ V P+ + Y++KV A+N G
Sbjct: 752 ITGDEWNKEQVRDWQQTEYIVTNTPT---FQPYKIKVTAVNFKG 792
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 7/180 (3%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V ++C P P+ VWKKDG NII S + L+I + +DSG Y+C
Sbjct: 253 ALKGKKVELYCIYGGTPLPQIVWKKDGHNIIPSASITQDNYGKTLVIKYPNYEDSGTYTC 312
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+N G S + + ++ P +A +RC A + + W HN
Sbjct: 313 EVSNGVGTALSYSIQLNIEAAPFFTVEPDVQNLAEGETAVIRCEAGGTPVPKIT--WIHN 370
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G I + N P + + IT+ D G Y C S++G + + V+ P
Sbjct: 371 GKPIEQAEPN----PRRQVTANSIVITDLVKKDTGNYGCNATSSIGYVYKDVYINVQSIP 426
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 116/297 (39%), Gaps = 46/297 (15%)
Query: 12 EAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAKN 70
EA G P Y W +NG+ + +R Q T+ P + D YQC A N
Sbjct: 55 EAEGEPGPKYRWIKNGKPFEYTSY----DNRILQQSGRGTLVVSKPRDEDLGQYQCFAYN 110
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKKDGNI 129
+ T S++ SFK+ + A EG + C P+ PKPK W +
Sbjct: 111 EWGTAASNSVFVRRAELNSFKETDGQQVVKAEEGKPFKLTCEPPDGHPKPKVYWM----L 166
Query: 130 IGSGGRRKIFEN--------GNLLISPVSRDDSGI---YSCTATNVHGMDESKGRLIVLH 178
G G+ K N GNL S V+R+D+ + Y CTA ++ + G I L
Sbjct: 167 QGDQGQLKTINNSRMTLDPEGNLWFSNVTRNDASVDFAYICTANSIFRNEYKFGNKIYLD 226
Query: 179 ------GPSYYEQLP------PKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P+ P KI A + ++L C L + +W +G I
Sbjct: 227 VTQTGISPTLNRHAPERQYTTTKIEKALKGKKVELYCIYGGTPLPQI--VWKKDGHNI-- 282
Query: 226 MDLNELETPNINID--GGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGPP 279
+ + +I D G L I ++ D+G Y C V + VG +S + +E P
Sbjct: 283 -----IPSASITQDNYGKTLVIKYPNYEDSGTYTCEVSNGVGTALSYSIQLNIEAAP 334
>gi|441613651|ref|XP_004088156.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Nomascus leucogenys]
Length = 1015
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 214/483 (44%), Gaps = 47/483 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE L S+ + D L + N
Sbjct: 345 DIGSNLRWGCAAAGKPRPTVRWLRNGEPLASQ-----------VGDVGLPPTHHN----- 388
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+L P F+ P+ A GG + I C P AAPK
Sbjct: 389 -----------------------SLAPDFRLNPVRRLIPAARGGEIIIPCQPRAAPKAVV 425
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 426 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 484
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 485 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 544
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 545 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLNWS 604
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 605 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 659
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 660 VIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 719
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 720 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 778
Query: 481 TIW 483
++
Sbjct: 779 LVY 781
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 19 VTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL---- 72
++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 170 LSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDFST 223
Query: 73 KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+K
Sbjct: 224 KSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWRK- 281
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 282 --VDGSLSPQWTTVEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 337
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 755 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 812
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 813 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHSNTKYHVTVRAYNRAG 870
Query: 473 PGPES 477
GP S
Sbjct: 871 TGPAS 875
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 84/215 (39%), Gaps = 33/215 (15%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSPTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 191
G R GNL+I +P D+G+Y C A+N G S+ ++ Q T
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGXXWLLGQGLQNST 143
Query: 192 IAAHRNLQLRCS------AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG---- 240
+ + C T +L ++Y W N E PN I DG
Sbjct: 144 SMLGSHPEWPCXPSTPWFPQTPRILGLSYRWLLN------------EFPNFIPTDGRHFV 191
Query: 241 ----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 192 SQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 225
>gi|266634534|dbj|BAI49425.1| neuroglian [Mythimna separata]
Length = 1254
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 214/470 (45%), Gaps = 40/470 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P +W NG+ + E R + N + I L ++D Y C A +
Sbjct: 362 CEASGTPTPKITWIHNGKPIEQ----AEPNPRRQVTANTIVITNL-VKKDTGNYGCNATS 416
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ Y + V ++ P K+ P E+ T +G + C APKP W KD ++
Sbjct: 417 SIGYVYKDVYINVQSIPPEIKEGP-ENLTRV-DGSEAVLKCRVFGAPKPLVKWMKD-DVD 473
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES------KGRLIVLHGPSYYE 184
+GG+ I G+L+I VS D G Y C A N G + K R ++ P +YE
Sbjct: 474 VTGGKYNITPEGDLVIRDVSYTDVGTYQCYAKNKFGEKSAFGSLDVKKRTVITDKPEHYE 533
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+AA + RC+A+ ++ L + IW ++G +I D + D LL
Sbjct: 534 -------VAAGSSATFRCNANADDSLKLQIIWLNDGQQI---DFENQPRFRMTNDYSLL- 582
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I++ + D+GEY C+ ++ + + + T+ V+ P P ++ +E H+ +AT++W
Sbjct: 583 ISDTTELDSGEYTCIARTAIDEARAQATLTVQDKPN-PPVIESIECHEKTATLRWHSMGD 641
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI Y I T + TW S++V + S L PW+ Y F+V A
Sbjct: 642 NRAPILRYSIQYNTTFTPDTWDLASDNVPAIDT---------SWTVQLSPWANYTFRVAA 692
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PSS S T D P + P + G G ++ ISW +P+ + N P YY
Sbjct: 693 WNKIGPSTPSSHSDVCTTQPDVPDKNPDNVVGEGSDPTNMVISWSKMPQIEHNGPGFYYL 752
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ WR+ + E ++++ V P+ + Y++KV A+N G
Sbjct: 753 VSWRRNITGQPWSEEQVRDWQQTDYVVTNTPT---FVPYKLKVTAVNYKG 799
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V ++C P P+ VWKK+G +I+ S G + L+I + +D G Y+C
Sbjct: 260 ALKGKKVELYCIYGGTPLPQIVWKKNGRSILSSQGITQDNYGKTLVIKYPTYEDQGTYTC 319
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+N G +S L+ + ++ P +A + +++C A + W HN
Sbjct: 320 EVSNGVGTAQSYSILLNIEAAPFFTVEPEIQNLAEGESAEIKCEASGTPTPKIT--WIHN 377
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-P 278
G I + N P + + ITN D G Y C S++G + + V+ P
Sbjct: 378 GKPIEQAEPN----PRRQVTANTIVITNLVKKDTGNYGCNATSSIGYVYKDVYINVQSIP 433
Query: 279 PGLPGG 284
P + G
Sbjct: 434 PEIKEG 439
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 111/306 (36%), Gaps = 54/306 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P Y W +NG+ + +R Q T+ P + D YQC A
Sbjct: 53 CEAEGEPAPKYRWIKNGKPFEYTSY----DNRISQQSGRGTLVISQPRDEDLGQYQCFAY 108
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKKDGN 128
N+ T S++ SFK+ + A EG + C P+ PKPK W
Sbjct: 109 NEWGTAASNSVFVRRAELNSFKETDSQQVVVAEEGKPFKLTCEPPDGHPKPKVYWM---- 164
Query: 129 IIGSGGRRKIFENGNLLISP----------------VSRDDSGI---YSCTATNVHGMDE 169
+ G G+ K N + + P V+R+D+ + Y CTA ++ +
Sbjct: 165 LQGDQGQLKTINNSRMTLDPEGNLWFSNVTRLWFSNVTRNDASVNFAYICTANSIFRNEY 224
Query: 170 SKGRLIVL-------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 216
G I L H P + ++L C L + +W
Sbjct: 225 KFGNKIYLQVTETGIASTLNRHEPVRQYTTRKVEKALKGKKVELYCIYGGTPLPQI--VW 282
Query: 217 THNGVRIGNMDLNELETPNINID--GGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
NG I L + I D G L I ++ D G Y C V + VG + + ++
Sbjct: 283 KKNGRSI-------LSSQGITQDNYGKTLVIKYPTYEDQGTYTCEVSNGVGTAQSYSILL 335
Query: 275 -VEGPP 279
+E P
Sbjct: 336 NIEAAP 341
>gi|345786242|ref|XP_533760.3| PREDICTED: neural cell adhesion molecule L1-like protein [Canis
lupus familiaris]
Length = 1225
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 216/481 (44%), Gaps = 37/481 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG ++ + + ++ L P A+YQC A N
Sbjct: 368 CEAEGEPEPTIKWRVNGSPIDKNPFAGD-----VVSPGEISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + + C A+P P W+K
Sbjct: 422 VHGTILANANIDVVDVRPLIQTE--DEEHYATVVGYSAFLHCEFFASPDPVVSWQKVDEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I ENG L I+ + DD+G YSC N G L + + Q+ P
Sbjct: 480 KPLEGRRYHIHENGTLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIRNATKL--QVSP 537
Query: 189 K-ITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
K + L+L C + + L + W+ NG ++N E I IDG L I
Sbjct: 538 KNPRVPKLHTLELHCESTCDPHLRHSLKLSWSKNGEA---FEINATEDGRIIIDGANLTI 594
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
+N + D G Y C ++ + ++ T V V P P + + E S + W G +
Sbjct: 595 SNVTSEDQGIYSCSAQTALDSVTDVTQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDDH 654
Query: 306 GRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
I+ Y + N W +E+ R G KE ++ L P+ Y+F+VIA
Sbjct: 655 NSHISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVMLSLAPYVRYQFRVIA 704
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y+
Sbjct: 705 VNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYR 764
Query: 424 IFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE + V +
Sbjct: 765 VTWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINHLGSGPEPQSVIL 818
Query: 483 W 483
+
Sbjct: 819 Y 819
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 180/494 (36%), Gaps = 59/494 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F PD SW + E PLE + RY I +N E D Y C +N
Sbjct: 461 CEFFASPDPVVSWQKV-----DEAKPLEGR-RYHIHENGTLQINKTTEDDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+A L + L + P + P L + E C+P K W
Sbjct: 515 AKGKTAVTANLDIRNATKLQVSPKNPRVPKLHTLELHCEST-----CDPHLRHSLKLSWS 569
Query: 125 KDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K+G I + R I + NL IS V+ +D GIYSC+A ++ VL P
Sbjct: 570 KNGEAFEINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDVTQVTVLDVPD 629
Query: 182 YYEQLPPKITIAAHRNLQLRCSA---HTEELLDVAYIWTHNGVRIGN-MDLNELETPNIN 237
E L ++ +R+++L A H + + + N G +L ++
Sbjct: 630 PPENL--HLSERQNRSVRLTWEAGDDHNSHISEYIVEFEGNKEEPGRWEELTRVQGKETT 687
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
+ L F E V +S + S P P ++V I
Sbjct: 688 VMLSLAPYVRYQFRVIAVNE-VGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMII 746
Query: 298 QW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVP 353
+W P Y++ TW V +E V +T R V+ P
Sbjct: 747 KWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMTP 791
Query: 354 --WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
++ Y+ +V A N LG G P PQ + D P AP G + ++W
Sbjct: 792 TVYAPYDVQVQAINHLGSG----PEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVTWS 847
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVK 464
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 848 TIPKDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLT 907
Query: 465 VQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 908 VLAYNSKGAGPESE 921
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 113/310 (36%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T++W ++ + P + D R + +N T + N Y+C
Sbjct: 57 CEAKGNPEPTFAWTKDDK-------PFDLSDSRIIVSNNSGTFKIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGVAMSEEIEFIVPNVPKFPKEKIDPLEVE----EGDPIVLQCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP +TI L L C A E L
Sbjct: 226 SLRHANDSSSSTEIGSKANSIKQRKPRLLLPPVESGSESTVTILKGDTLLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYRDRGNYRCTANNFLGSTTH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 71/194 (36%), Gaps = 14/194 (7%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P+ES + + +G + + C E P P+ W K G + G K
Sbjct: 250 KPRLLLPPVESGSESTVTILKGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA N G +IV P ++ + P + + L C
Sbjct: 310 TLKIENVSYRDRGNYRCTANNFLGSTTHDFHVIV-EEPPHWTKKPQSGVYSTGSSGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
A E + W NG I N ++ +P G + TN Y+C
Sbjct: 369 EAEGEPEPTIK--WRVNGSPIDKNPFAGDVVSP------GEISFTNLQPNHTAVYQCEAS 420
Query: 262 STVGKISTKTTVIV 275
+ G I + V
Sbjct: 421 NVHGTILANANIDV 434
>gi|441665521|ref|XP_003264957.2| PREDICTED: neural cell adhesion molecule L1-like protein [Nomascus
leucogenys]
Length = 1171
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 218/478 (45%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G N + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYNAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GR+ I+ENG L I+ + DD+G YSC N G L + + + P
Sbjct: 480 KPLEGRQYHIYENGTLQINRTTEDDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I+ Y + N E +E+ R G+K I L P+ Y+F+VIA NE
Sbjct: 656 SNISEYIVEFEGN-------KEEPGRWEELTRVQGKKTTVILP-LAPFVRYQFRVIAVNE 707
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++ W
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTW 767
Query: 427 RKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GPE + VT++
Sbjct: 768 KPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPEPQSVTLY 819
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGRQYHIYENGTLQINRTT-EDDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PEPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 110/315 (34%), Gaps = 70/315 (22%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP--------- 61
CEA G P+ T++W ++G YF ++T R P
Sbjct: 57 CEAKGNPEPTFTWTKDGNPF------------YFTDHRIITSNDSGTFRIPNEGHISHFQ 104
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A N+L S ++ P F K PLE E EG + + CNP
Sbjct: 105 GKYRCFASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLP 160
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA-------------- 161
P ++ + + I R + + G+L + V DS Y C A
Sbjct: 161 PLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPM 220
Query: 162 -----TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSA 204
+ H D S I S ++ LPP ITI L L C A
Sbjct: 221 KLTVNSLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFA 280
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
E L W G G++ N G L+I N S+ D G Y C + +
Sbjct: 281 --EGLPTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFL 332
Query: 265 GKISTKTTVIVEGPP 279
G + VIVE PP
Sbjct: 333 GTATHDFHVIVEEPP 347
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 250 KPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPIDN 389
>gi|156396450|ref|XP_001637406.1| predicted protein [Nematostella vectensis]
gi|156224518|gb|EDO45343.1| predicted protein [Nematostella vectensis]
Length = 1349
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 212/482 (43%), Gaps = 42/482 (8%)
Query: 11 CEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
CEAFG P Y W+ NG +++NS+ L + +N LT + + +YQC A+
Sbjct: 435 CEAFGDPTPAYGWYVNGSKIVNSQHL--------IVTNNKLTFKAVELYEHAGIYQCVAE 486
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ + + KP Y + I C+ AAP VW KD +
Sbjct: 487 NDYGMVVSTTVVEIDARKPGIIGF---GPFYIFKDTKGEIKCDSNAAPAANHVWSKDDQV 543
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
+ GR + +L+I+PV ++D G Y+C ATN+ G D V +
Sbjct: 544 LSISGRYSLGPGNSLVITPVQQNDEGKYTCKATNLLGTDTKSNDATVYERTKITVRPDAS 603
Query: 190 ITIAAHRNLQLRCSAHTE-ELLDV-AYIWTHNGVRIGNMDLNELE-TPNIN-IDGGL-LE 244
+ + + RC A + L+++ Y W +G EL+ T NIN I L L+
Sbjct: 604 VELIKGKPTDFRCQATADPRLMNILKYKWLKDGT--------ELQYTENINWIPNQLRLK 655
Query: 245 ITNASFADAGEYECVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
++ A D Y CV K + + V+G P P + + + + I W
Sbjct: 656 LSEADIDDGAVYTCVAYTDDKLKYSEDRASSIANVQGVPFPPSNLTITNCYNLTTVITWV 715
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G++ G+PITHY+I + F I K+VD K S++ L PW+ F+
Sbjct: 716 PGSSTGKPITHYQIEQESE-----FEAGVWQILKKVD---DPKSTSLQLQLTPWAKLRFR 767
Query: 361 VIAGNELGYGEPSSPSP--QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
+ A N +G S P+P T +P P G GK +L +W PL + +QNAP
Sbjct: 768 MRAVNSVGPSRASLPTPVGACETKVSRPTMVPKNFRGVPGKANELDAAWTPLTKLEQNAP 827
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y + +RK ++Q T+ N A I + YY +E + A ND+G GP+S+
Sbjct: 828 GCKYVLKYRKSGAKDWQKVTID---NPSTAKYSILNPGYYELWEFMIYATNDIGDGPQSD 884
Query: 479 VV 480
++
Sbjct: 885 II 886
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 30/217 (13%)
Query: 86 LKPSF----KKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKIF 139
LKP F + + LES A +G + +FC + +P P W + ++
Sbjct: 304 LKPVFVQDGEPKTLES---AIQGKSKALFCVAQMSPAPNNAIRWVRVDSVTNDKLPIVDG 360
Query: 140 ENG----------NLLISPVSRDD-SGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLP 187
+NG NL+IS VS++ G+Y C N G ES+ +L V P + + P
Sbjct: 361 KNGFSIPEDKSGRNLIISQVSKEQHEGVYQCIVENNQGKTESQLSQLKVFVPPGWIVKPP 420
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
PK+ I + L C A + AY W NG +I N L N + +E+
Sbjct: 421 PKMNIPMYGGAVLLCEAFGDPT--PAYGWYVNGSKIVNS--QHLIVTNNKLTFKAVEL-- 474
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG 283
+ AG Y+CV ++ G + + T V ++ PG+ G
Sbjct: 475 --YEHAGIYQCVAENDYGMVVSTTVVEIDARKPGIIG 509
>gi|326914464|ref|XP_003203545.1| PREDICTED: contactin-5-like, partial [Meleagris gallopavo]
Length = 779
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 217/475 (45%), Gaps = 27/475 (5%)
Query: 11 CEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C A G P T SW + NG + R VL I + E D MY+C+A+
Sbjct: 97 CFALGNPVPTISWKKVNGHN--------PSKARLRKSQAVLEIPNVQLE-DAGMYECKAE 147
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N QL+V T P + ++ ++E +GE + C P+P + W K+G
Sbjct: 148 NSRGRNVFRGQLQVYTY-PQWVEKLNDTELDSGE--QLRWECKATGKPRPTYRWLKNGAP 204
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-HGPSY-YEQLP 187
+ R ++ N L+I V+ D+G+Y C A N +G + L +L P++ Q+
Sbjct: 205 LWPQSRIEMV-NSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASAPTFPLNQMR 263
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
I I + + + C + W + +E + + D L I N
Sbjct: 264 KTIIITKGQEVVIECKPQASPKPTIT--WKKGDKALRESKRSEACSQASSAD---LMIRN 318
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG Y C V++ +S +T ++V GPPG PG V V E+ T+AT+ W+ GA N
Sbjct: 319 ILLMHAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIVEEITDTTATLSWSPGADNHS 378
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PI+ Y + AR+ ++ W + D +G E+++ L PW YEF+V+A N++
Sbjct: 379 PISLYNLQARSPFSLGW-----QTVKTVPDVISGDMESAMAVELNPWVEYEFRVVATNKI 433
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G G+PS+PS T P P+ + G G+ +L I+WEP+ E QN Y + +R
Sbjct: 434 GTGDPSAPSRMIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR 493
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
N T E + + + R S T +EVKV N+ G GP S +V I
Sbjct: 494 -PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPIVVI 547
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 197/500 (39%), Gaps = 47/500 (9%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C+A G P TY W +NG PL Q R + ++VL IR +N D
Sbjct: 176 LDSGEQLRWECKATGKPRPTYRWLKNGA-------PLWPQSRIEMVNSVLMIRTVNIS-D 227
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ T Y+SA+L++L P+F + +G V I C P+A+PKP
Sbjct: 228 AGMYQCLAENKYGTIYASAELKILASAPTFPLNQMRKTIIITKGQEVVIECKPQASPKPT 287
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
WKK + R + + +L+I + +G Y C + L+V
Sbjct: 288 ITWKKGDKALRESKRSEACSQASSADLMIRNILLMHAGRYGCRVQTAADTVSDETELLVR 347
Query: 178 HGPSYYEQLPPKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
P PP + I L A + + + + +G + +
Sbjct: 348 GPPG-----PPGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGWQTVKTV- 401
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKST----VGKISTKTTVIVEG---PPGLPGGV 285
P++ I G + EYE V +T G S + +I P P V
Sbjct: 402 -PDV-ISGDMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANV 459
Query: 286 QVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+ I W ++ NG Y + R N W + V + ++ R
Sbjct: 460 SGRSGRRHELVIAWEPVSEEFQNGEGF-GYIVAFRPNGTRGWKE--KMVTSSDASKFIYR 516
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
E+ + P + +E KV N G G P SP + +P AP + + +
Sbjct: 517 DES-----VPPLTPFEVKVGVYNNKGDG-PFSPIVVICSAEGEPTAAPIDVKATSLSVSE 570
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ ++W+ + +E P + +W K + E +E +K GN + + + T Y
Sbjct: 571 ILVAWKHI-KESLGRPQGFEIGYW-KDMEQEEAAEKVKTAGNE--SSLLLTGLEGNTLYH 626
Query: 463 VKVQAINDVGPGPESEVVTI 482
+ V+A N G GP S V +
Sbjct: 627 LTVRAYNAAGYGPPSTAVRV 646
>gi|327266144|ref|XP_003217866.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Anolis carolinensis]
Length = 1214
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 218/475 (45%), Gaps = 35/475 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W RNG L T + + ++ +T LN D A+YQC A N
Sbjct: 363 CEAVGDPEPTIKWKRNGVPL---TETKTSRAVFSTREISITDLVLN---DSAVYQCEATN 416
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ T ++A + VL + P P E G ++C+ A P P W KD ++
Sbjct: 417 KHGTILATANIDVLEIPPEILT-PDGEEYVVVVGYPSRLYCHFFAVPLPDVSWTKDDSM- 474
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
R NG L I ++D+G Y+C N+ G L V + +P
Sbjct: 475 ---KRLDADLNGTLEIRETRKEDAGFYTCVVKNIAGRRALTATLTVRDA-TKISVVPKNP 530
Query: 191 TIAAHRNLQLRC-SAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + LRC S + L D I W +G IG D +E I ++G L I N
Sbjct: 531 QVLKDHPVLLRCHSEYDPHLKDHFQISWRKDGEEIGKNDTDE---ERIIMEGDTLFIQNV 587
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
D G Y C+ +++ + + + V P P + + E S + W G +N P
Sbjct: 588 ELEDQGVYTCIGSTSLDTTADDSRITVIDVPDSPQDLYISEKRNRSVRLSWNAGNSNNSP 647
Query: 309 ITHYKIIARTN-WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I + + N W W +E+ R G ++ LVP+ Y+F+VI+ N
Sbjct: 648 INEFIVEFEENRWEPRKW---------RELIRVPGNDTTAVLP-LVPYVNYQFRVISVNA 697
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G +PS S +Y TP P + P I K +++++WEPL + N P + YK+ W
Sbjct: 698 VGRSQPSETSERYETPPAAPDKNPENIRVETSKPHEMNMTWEPLKPMEHNGPGLEYKVNW 757
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
R+++ E++ ET++++ + + P+ + Y++KVQA+N++G GPE +V+T
Sbjct: 758 RQQDVAEWEEETVQKH---FLVLQNTPT---FVPYDIKVQAMNNLGSGPEPDVIT 806
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 16/200 (8%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDD 153
+S+ +G ++ + C E P P W + DG + G I G LL I V+ +D
Sbjct: 259 QSKVTIMKGTDLLLECIAEGLPTPHLNWARVDGVTVHRGS---IENYGKLLKIEQVTAED 315
Query: 154 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 213
+GIY C A N G + + V P + + P + + C A + +
Sbjct: 316 AGIYECIARNALGETRHEFHVGVEEPPMWVIK-PESGVFSVGGSFVRLCEAVGDPEPTIK 374
Query: 214 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTT 272
W NGV L E +T + IT+ D+ Y+C + G I +T
Sbjct: 375 --WKRNGV-----PLTETKTSRAVFSTREISITDLVLNDSAVYQCEATNKHGTILATANI 427
Query: 273 VIVEGPPGL--PGGVQVVEV 290
++E PP + P G + V V
Sbjct: 428 DVLEIPPEILTPDGEEYVVV 447
>gi|432859188|ref|XP_004069056.1| PREDICTED: neurofascin-like [Oryzias latipes]
Length = 1358
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 214/478 (44%), Gaps = 42/478 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD----RYFIQDNVLTIRYLNPE-RDPAMYQ 65
C A G P T WF +GE PLE + R + D TI + + E A+YQ
Sbjct: 384 CRANGKPKPTIQWFVDGE-------PLEGSNSVRHREMLGD---TIIFRSVEIGSSAVYQ 433
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A NQ ++A + VL L P P E + C +P P+ W K
Sbjct: 434 CNASNQHGYLLANAFVSVLDLSPMMLG-PKNQLIQVIENNRTFLDCPFFGSPLPEHRWFK 492
Query: 126 DGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+G G GG + + NG+L I R+D G Y+C A+N+ G E++ L V P+
Sbjct: 493 NGQGSGLDGGHYRTYLNGSLEIKRTRREDEGTYTCVASNMLGKAENQVHLEVKE-PTRIV 551
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P + + C +++ L V WT + +DL + D L
Sbjct: 552 QAPVHQSAVRGTTARFDCKVNSDPTLPVTVTWTKDD---KPLDLRW----RLKKDKDSLT 604
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + DAG Y C+ KS + + S + V G P P + + + S + W G
Sbjct: 605 ISNINEGDAGTYTCMAKSAIDQDSVSARLTVLGRPDPPMDLDLSDPAARSVRLTWIPGND 664
Query: 305 NGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ PIT + + W W N++ ++G + + L P+ Y+F+VI
Sbjct: 665 HNSPITGFLVQFEEDRWEPGRWQNLTS---------FSGDLNSVVLQ-LSPYVNYQFRVI 714
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G +PS PSP+Y T P P + G G + ++ I+WEPL ++N PN+ Y
Sbjct: 715 AINSVGQSDPSQPSPRYKTSGAAPDAIPRGLRGWGTRNDNMEITWEPLQDLERNGPNLQY 774
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++WR+K+ E + G + + + Y YE+++QA N+ G GPES VV
Sbjct: 775 HVWWRRKDSGE-----QWDSGTTPSSNYVVQNTDTYVPYEIRIQASNEFGSGPESNVV 827
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 107/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L C A G+P + +WF+ G L ++ + E+ ++ VL++ E D Y
Sbjct: 289 ELLLECIAAGLPTPSITWFKKGAELPAKKVKFENNNKVL---RVLSVS----EEDAGDYV 341
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N + + + V P + +P EGG + C PKP W
Sbjct: 342 CTANNNVGMIRHTISVDV-KAAPYWLDKPTNLILAPDEGGR--LVCRANGKPKPTIQWFV 398
Query: 126 DGNII-GSGG-RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
DG + GS R + ++ V S +Y C A+N HG + + VL
Sbjct: 399 DGEPLEGSNSVRHREMLGDTIIFRSVEIGSSAVYQCNASNQHGYLLANAFVSVL------ 452
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
L P + +N ++ + LD + W NG G +D T
Sbjct: 453 -DLSP--MMLGPKNQLIQVIENNRTFLDCPFFGSPLPEHRWFKNGQGSG-LDGGHYRT-- 506
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI D G Y CV + +GK + + V+ P
Sbjct: 507 --YLNGSLEIKRTRREDEGTYTCVASNMLGKAENQVHLEVKEP 547
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 113/299 (37%), Gaps = 34/299 (11%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY-----L 55
+D + ++ CEA G P T+ W +NG+ N P R +Q + T++
Sbjct: 79 VDPRDNIIIECEAKGNPTPTFLWRKNGKFFNFGNDP-----RVTMQKHSGTLKIGFRPGE 133
Query: 56 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 115
PE YQC A N S+ L ++ P + K LE EG + + CNP
Sbjct: 134 RPEDYEGEYQCFASNDHGVAMSNKILLRVSKAPLWPKEILEPRVVT-EGSPLILPCNPPP 192
Query: 116 APKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA----------T 162
P ++ D N+ I R + +NG+L S V D+ YSC A
Sbjct: 193 GLPPPQIFWMDSNMNPIPQNERVSMGQNGDLYFSNVHLQDAERDYSCNARFNFTHTIQQK 252
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N + R + PS+ + + R+ +L L + W G
Sbjct: 253 NPFSLRVQTSRRVAESRPSFLTPSGIQSSKMVLRDQELLLECIAAGLPTPSITWFKKGA- 311
Query: 223 IGNMDLNELETPNINIDGG--LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
EL + + +L + + S DAG+Y C + VG I +V V+ P
Sbjct: 312 -------ELPAKKVKFENNNKVLRVLSVSEEDAGDYVCTANNNVGMIRHTISVDVKAAP 363
>gi|345326812|ref|XP_001505304.2| PREDICTED: neural cell adhesion molecule L1-like protein
[Ornithorhynchus anatinus]
Length = 1092
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 221/479 (46%), Gaps = 37/479 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD-PAMYQCRAK 69
CEA G P W RNG +N L + F ++ I +N + D A+YQC A
Sbjct: 306 CEASGNPRPEIKWKRNGLPVNKN---LVSSGQIFPRE----ISLVNLQLDQSAVYQCEAS 358
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKFVWKKDGN 128
N+ T ++A + VL + P L+ E YA G + + C ++P + +W+++ +
Sbjct: 359 NKHGTILANANVDVLDIIPVMLT--LDGENYAAVIGYSAFLHCGVFSSPPAEIIWQREDS 416
Query: 129 IIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ GG R +ENG L I +++DSG Y+C TN G L + + LP
Sbjct: 417 VTPLGGPRFFKYENGTLEIKQTTKEDSGSYNCLVTNSKGKTGVTAYL-AIRDATKLRVLP 475
Query: 188 PKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ L L+C + L + WT +G ++ N E I I+ L I
Sbjct: 476 KNPKVLKSHLLVLQCQIELDSHLKHSLKLSWTKDG---NELESNGTEGDRIMIEMNTLSI 532
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
+N + D G Y C+ +++ + + VI+ P P + + E S + W G ++
Sbjct: 533 SNVTLEDEGVYSCLASTSLDSVKADSHVIILDVPDSPDNLHLSEKQNRSVRLTWKAGNSH 592
Query: 306 GRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
I + I N + W +E+ G E ++ L P+ Y+F+VIA
Sbjct: 593 NSIINEFIIEYEGNKEDSEKW---------EELITVPGN-ETTVILSLAPYVKYKFRVIA 642
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N +G +PS PS + TP P + P I + ++ + WEPL +QN P + Y+
Sbjct: 643 VNSVGRSQPSKPSEHHETPPAAPDKNPENIRVDASEPNEMIMKWEPLKPMEQNGPGLEYR 702
Query: 424 IFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+ WR++ +T++ ET+K++ V+ + + + Y++KVQAIN G GPE +V T
Sbjct: 703 VSWRRQGVETDWNEETVKKH------VLVLKNTPTFAPYDIKVQAINQFGSGPEPQVAT 755
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 193/499 (38%), Gaps = 71/499 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C F P W R + PL + ++ L I+ E D Y C N
Sbjct: 399 CGVFSSPPAEIIWQREDSVT-----PLGGPRFFKYENGTLEIKQTTKE-DSGSYNCLVTN 452
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA----APKPKFVWKKD 126
++ + L ++ + K R L + + + C E K W KD
Sbjct: 453 ---SKGKTGVTAYLAIRDATKLRVLPKNPKVLKSHLLVLQCQIELDSHLKHSLKLSWTKD 509
Query: 127 GNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
GN + G+ G R + E L IS V+ +D G+YSC A+ ++ +I+L P
Sbjct: 510 GNELESNGTEGDRIMIEMNTLSISNVTLEDEGVYSCLASTSLDSVKADSHVIILDVPDS- 568
Query: 184 EQLPPKITIAAHRNLQLRCS---AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
P + ++ +N +R + ++ + +I + G + + EL T N
Sbjct: 569 ---PDNLHLSEKQNRSVRLTWKAGNSHNSIINEFIIEYEGNKEDSEKWEELITVPGNETT 625
Query: 241 GLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSA 295
+L + A + ++ + ++VG+ +K + E PP P ++V
Sbjct: 626 VILSL--APYVKY-KFRVIAVNSVGRSQPSKPSEHHETPPAAPDKNPENIRVDASEPNEM 682
Query: 296 TIQW---TDGATNGRPITHYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++W NG P Y++ R T+WN V +HV+ +
Sbjct: 683 IMKWEPLKPMEQNG-PGLEYRVSWRRQGVETDWNEE--TVKKHVL-------------VL 726
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGGGGGKIGDLS 404
+N ++ Y+ KV A N+ G G P PQ T D P AP + ++
Sbjct: 727 KNTPT-FAPYDIKVQAINQFGSG----PEPQVATGYSGEDYPDAAPLNVAVNIINSTLIN 781
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE------YGNVGIAVVRIPSEFYY 458
+W +PRE+ + YKI W K + + +E +G+ +V P Y
Sbjct: 782 ATWSKIPRERVHGHLKGYKISWWKTKSLLDERKHRQEKHFLVFWGDRDHGMV--PGLEPY 839
Query: 459 TEYEVKVQAINDVGPGPES 477
+E+ + V A N G GPES
Sbjct: 840 SEFHLSVLAFNSKGSGPES 858
>gi|440888801|gb|ELR44589.1| Contactin-4, partial [Bos grunniens mutus]
Length = 576
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 170/350 (48%), Gaps = 8/350 (2%)
Query: 135 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 194
R I E+G+L I V++ D+G Y+C ATN G S G L+V P+ P + +
Sbjct: 3 RITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTKVMVPPSSMDVTV 61
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADA 253
++ L C + L++ + W+ NG I + D + E G L I N A
Sbjct: 62 GESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHA 121
Query: 254 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 313
G+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G N PIT Y
Sbjct: 122 GKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYV 181
Query: 314 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373
I ART ++ W V + + + +D G+ + L PW YEF+ +A N +G GEPS
Sbjct: 182 IQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPS 236
Query: 374 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 433
PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 237 RPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMI 296
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 297 WMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVY 345
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 155/450 (34%), Gaps = 34/450 (7%)
Query: 51 TIRYLNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTI 109
++R +N + D Y C A N T S+ L V+ P + GE +
Sbjct: 11 SLRIINVTKSDAGSYTCIATNHFGTASSTGNL-VVKDPTKVMVPPSSMDVTVGESIVLPC 69
Query: 110 FCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTAT 162
+ + F W +G +I FE G+L+I + +G Y C
Sbjct: 70 QVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQ 129
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
+ LIV P E + L R + + I
Sbjct: 130 TSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFS 189
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIV 275
+G +N + P + IDG T EYE V + +G + S K
Sbjct: 190 VGWQAVNTV--PEL-IDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEE 246
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVI 332
P P V K+ I W + NGR Y + R W +
Sbjct: 247 ALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LA 303
Query: 333 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 392
+ RY R E+ + P+S +E KV N G G P SP+ + ++P + P+
Sbjct: 304 SADASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPAS 357
Query: 393 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 452
I D+ + W P EK Y++ + + +D E + ++ GN +I
Sbjct: 358 IFARSLSATDIEVFWAS-PMEKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQ--TSTKI 414
Query: 453 PSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ Y + V+A N G GP S V +
Sbjct: 415 TNLKGSALYHLAVKAYNSAGTGPASATVNV 444
>gi|157118545|ref|XP_001659157.1| cell adhesion molecule [Aedes aegypti]
gi|108875668|gb|EAT39893.1| AAEL008340-PA, partial [Aedes aegypti]
Length = 1182
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 212/467 (45%), Gaps = 30/467 (6%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
+TCEA GVP W NG+ L+ + R + N + L + D Y C A
Sbjct: 289 FTCEASGVPKPNIIWIHNGKPLDQS----KPNPRRQVSSNRIYFTKLE-KGDTGNYGCNA 343
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N L Y L VL L P + P LE Y + NVT+ C APKP+ W ++G
Sbjct: 344 TNSLGYVYKDVYLNVLALAPEITEPPKLE---YTVDRRNVTMTCRVFGAPKPEVKWIRNG 400
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ +GG+ K+ NG+L I V D+G Y+C A N G + G L+V ++ P
Sbjct: 401 REL-TGGKFKVEANGDLFIRGVEFSDAGEYTCNAVNKLGEKSASGELVVKEHTKIIDE-P 458
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ A RC+A + L++ W NG I D E + + + L I+
Sbjct: 459 QDYEVVAGTPATFRCNAVADSSLELTIEWLTNGETI---DF-ESQPRFVMTNDYSLTISK 514
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
D G Y C ++ + ++ T+ V P P ++ +E H+T AT+ W N
Sbjct: 515 TIELDTGVYTCFARTDLDEVMANATLTVYDRPNAPS-LESIECHQTVATLSWKPNGDNRS 573
Query: 308 PITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
PI HY I T++ TW S+ V + S++ + PWS Y F+VIA N+
Sbjct: 574 PILHYTIEFNTSFTPDTWEISSKDVPATDF-------TYSVD--MSPWSNYTFRVIAINK 624
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G PS S T P++ P + G G + +L I W P+ + NAP Y+++W
Sbjct: 625 VGPSLPSGHSDVCTTQPSVPFKNPDNVEGQGTEPNNLVIRWTPMSEIEHNAPRFQYRVYW 684
Query: 427 RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ + + +E + ++ + VVR F Y +KV AIN++G
Sbjct: 685 QLDTGVDHWNTEDIFDWRQSEL-VVRDQETF--RRYRIKVVAINELG 728
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 85/222 (38%), Gaps = 22/222 (9%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPS------FKKRP-----LESETYAGEGGNVT 108
D +Y C A + + Y +L +KP+ K RP A G +
Sbjct: 137 DDFVYACAASSLFRNEYKIGNRVLLQVKPTGISAAQNKHRPERQYVSRKNEVALRGKKIE 196
Query: 109 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVH 165
IFC P P+ VW KDG I KI +N +L+I S +D G Y+C ++N
Sbjct: 197 IFCIYGGTPLPQVVWTKDGRPIQWSD--KIQQNNYGKSLVIKHASFEDQGTYTCESSNGV 254
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
G ES + + Y+ + P A + C A ++ IW HNG +
Sbjct: 255 GSAESYSIRLEVQAVPYFTKEPEIYNAAEDETAEFTCEASGVPKPNI--IWIHNGKPLDQ 312
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P + + T D G Y C +++G +
Sbjct: 313 SKPN----PRRQVSSNRIYFTKLEKGDTGNYGCNATNSLGYV 350
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 15/163 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ ++T TC FG P W RNG L +E FI+ + D
Sbjct: 376 DRRNVTMTCRVFGAPKPEVKWIRNGRELTGGKFKVEANGDLFIRGVEFS--------DAG 427
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N+L + +S +L V+ P + E AG T CN A +
Sbjct: 428 EYTCNAVNKLGEKSASGEL-VVKEHTKIIDEPQDYEVVAGTPA--TFRCNAVADSSLELT 484
Query: 123 --WKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTA 161
W +G I S R + + +L IS D+G+Y+C A
Sbjct: 485 IEWLTNGETIDFESQPRFVMTNDYSLTISKTIELDTGVYTCFA 527
>gi|338714495|ref|XP_003363092.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Equus caballus]
Length = 1225
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 216/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG + + + ++ L P A+YQC A N
Sbjct: 368 CEAEGEPEPTIKWRVNGSPIEKNPFAGD-----VVSSREISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + ++C ++P+ W+K
Sbjct: 422 AHGTILANANIDVVDVRPLIQTE--DEENYATVVGYSAFLYCEFFSSPEAIVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAKGKTAVTANLDIRNA-TKLRISPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ L+LRC + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C ++ + ++ T V + P P + + E S + W G +
Sbjct: 596 NVTLEDKGIYSCSAQTALDSVADITQVTILDVPDPPENLHLSERQNRSVRLTWEAGDDHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G KE ++ L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVLLSLAPYVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+V+VQA+N +G GPE + V ++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAVNHLGSGPEPQSVVLY 819
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 188/496 (37%), Gaps = 55/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 461 CEFFSSPEAIVSWQKV-----EEAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P + P S T + C+ K W K
Sbjct: 515 AKGKTAVTANLDIRNATKLRISPKNPRVP-RSHTLELRCEST---CDSYLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIYSC+A ++ +L P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKETTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
LL + A + ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 LLSL--APYVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
P ++ Y+ +V A N LG G P S + D P AP G + ++W +
Sbjct: 791 PTVYAPYDVQVQAVNHLGSG-PEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSI 849
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQ 466
P+++ + Y+I W K KE + + R +PS ++E+ + V
Sbjct: 850 PKDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVL 909
Query: 467 AINDVGPGPESEVVTI 482
A N G GPESE T
Sbjct: 910 AYNSKGAGPESEPYTF 925
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 98/265 (36%), Gaps = 21/265 (7%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + G L E ++ Y + + Y RD +Y+C
Sbjct: 274 LLLECFAEGLPTPQVDWNKLGGDLPKGR---ETKENYGKTLKIENVSY----RDKGIYRC 326
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L + + V P + K+P G G + C E P+P W+ +
Sbjct: 327 TANNFLGSATHDFHITVEE-PPRWTKKPQSGVYSTGSSG--ILLCEAEGEPEPTIKWRVN 383
Query: 127 GNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYYE 184
G+ I + + + + + + + +Y C A+N HG + + V+ P
Sbjct: 384 GSPIEKNPFAGDVVSSREISFTNLQPNHTAVYQCEASNAHGTILANANIDVVDVRPLIQT 443
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLL 243
+ + L C + V++ + LE +I + G L
Sbjct: 444 EDEENYATVVGYSAFLYCEFFSSPEAIVSWQKVE--------EAKPLEGRRYHIYENGTL 495
Query: 244 EITNASFADAGEYECVVKSTVGKIS 268
+I + DAG Y C V++ GK +
Sbjct: 496 QINRTTEEDAGSYSCWVENAKGKTA 520
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 30/71 (42%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P P+ W K G + G K L I VS D G
Sbjct: 263 ESSLTILKGETLLLECFAEGLPTPQVDWNKLGGDLPKGRETKENYGKTLKIENVSYRDKG 322
Query: 156 IYSCTATNVHG 166
IY CTA N G
Sbjct: 323 IYRCTANNFLG 333
>gi|196016251|ref|XP_002117979.1| hypothetical protein TRIADDRAFT_33302 [Trichoplax adhaerens]
gi|190579452|gb|EDV19547.1| hypothetical protein TRIADDRAFT_33302 [Trichoplax adhaerens]
Length = 601
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 219/482 (45%), Gaps = 43/482 (8%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAM 63
+D W C A G +V Y W++NG ++ + +Y + +N L IRYL + D A+
Sbjct: 92 SDFMWACRAGG-SNVQYRWYKNGAVV-------PNSGKYNVYNNGSLLIRYLE-QSDKAV 142
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y C A N +S L ++ +P F RPL ET +G + C + P+PK +
Sbjct: 143 YSCLASNSHSNLVTSGWLNIIESQPYFIARPLP-ETILFQGSSSVFRCTVDGGPRPKMTY 201
Query: 124 KKDGNI---IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
KD N+ + + + + NGNL+I V++ D+G+Y C A+N G ++ G +V
Sbjct: 202 LKD-NVALNLATTNKYTVLLNGNLVIRNVNQSDAGVYRCIASNTRGSIDASGTAVV-RDS 259
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + P + L C+A + LD WT NG + N ++T N+N
Sbjct: 260 TVFVTSPTSRSFRRPNPFTLHCNATKDSTLDATIYWTINGANVTNPRA-VIQTTNLN--- 315
Query: 241 GLLEITNASFADAGEYECVVKSTVGKIS----TKTTVI-VEGPPGLPGGVQVVEVHKTSA 295
+L N++ AD+G Y C + + V + T+T I + P P V K+S
Sbjct: 316 SILTFVNSTLADSGNYACNIATLVPSVGYERRTRTAAITINDIPDPPFNVSSRNKTKSSM 375
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
I W G +N P+ + I N S W + +V Y G + L PW+
Sbjct: 376 YISWLPGNSNNSPLQKFIIRYLVNSVSVWRDADNNVPVSAT--YRGIQ-------LSPWN 426
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA--PSRIGGGGGKIGDLSISWEPLPRE 413
TY+ V A N +G +S S + T D PY+ R G + + I W L R+
Sbjct: 427 TYQIVVAAVNGVGISR-NSLSINHVTDTDVPYEGLGSVRFFGIANENTAVQIVWVLLSRQ 485
Query: 414 KQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
QN P I Y++++R + T + S +L GN G R+ + T YE ++ NDVG
Sbjct: 486 HQNGPGIGYRLYYRTQASITGWVSRSL---GNTG--SFRLSALLPNTRYEFQLVPYNDVG 540
Query: 473 PG 474
G
Sbjct: 541 EG 542
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 38/282 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D+ C A G P T W + G LP + R+ LTI L E D Y
Sbjct: 3 DVILQCIATGFPIPTIQWQKVGG-----PLPF-GRYRFDKWGRQLTITNLRKE-DAGNYS 55
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKR------PLESE-TYAGEGGNVTIFCNPEAAPK 118
C A N AQL + + PS++ R P+ S+ +A G +
Sbjct: 56 CTAMNGGTPMTKMAQL-TIHIDPSWELRITDTAQPVLSDFMWACRAGGSNV--------- 105
Query: 119 PKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
++ W K+G ++ + G+ ++ NG+LLI + + D +YSC A+N H + G L ++
Sbjct: 106 -QYRWYKNGAVVPNSGKYNVYNNGSLLIRYLEQSDKAVYSCLASNSHSNLVTSGWLNIIE 164
Query: 179 GPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN-- 235
Y+ P P+ + + RC+ + Y+ N+ LN L T N
Sbjct: 165 SQPYFIARPLPETILFQGSSSVFRCTVDGGPRPKMTYL-------KDNVALN-LATTNKY 216
Query: 236 -INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276
+ ++G L+ I N + +DAG Y C+ +T G I T +V
Sbjct: 217 TVLLNGNLV-IRNVNQSDAGVYRCIASNTRGSIDASGTAVVR 257
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
GG+V + C P P W+K G + G R L I+ + ++D+G YSCTA N
Sbjct: 1 GGDVILQCIATGFPIPTIQWQKVGGPLPFGRYRFDKWGRQLTITNLRKEDAGNYSCTAMN 60
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G +K + +H +E +IT A L A +V Y W NG +
Sbjct: 61 -GGTPMTKMAQLTIHIDPSWEL---RITDTAQPVLSDFMWACRAGGSNVQYRWYKNGAVV 116
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
N N+ +G LL I +D Y C+ ++ + T + I+E P
Sbjct: 117 PNSG-----KYNVYNNGSLL-IRYLEQSDKAVYSCLASNSHSNLVTSGWLNIIESQP 167
>gi|338714497|ref|XP_003363093.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Equus caballus]
Length = 1171
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 216/478 (45%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG + + + ++ L P A+YQC A N
Sbjct: 368 CEAEGEPEPTIKWRVNGSPIEKNPFAGD-----VVSSREISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + ++C ++P+ W+K
Sbjct: 422 AHGTILANANIDVVDVRPLIQTE--DEENYATVVGYSAFLYCEFFSSPEAIVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAKGKTAVTANLDIRNA-TKLRISPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ L+LRC + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C ++ + ++ T V + P P + + E S + W G +
Sbjct: 596 NVTLEDKGIYSCSAQTALDSVADITQVTILDVPDPPENLHLSERQNRSVRLTWEAGDDHN 655
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I+ Y + N E +E+ R G KE ++ L P+ Y+F+VIA NE
Sbjct: 656 SNISEYIVEFEGN-------KEEPGRWEELTRVQG-KETTVLLSLAPYVRYQFRVIAVNE 707
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++ W
Sbjct: 708 VGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTW 767
Query: 427 RKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ + E++ ET+ + +R+ + Y Y+V+VQA+N +G GPE + V ++
Sbjct: 768 KPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAVNHLGSGPEPQSVVLY 819
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 188/496 (37%), Gaps = 55/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 461 CEFFSSPEAIVSWQKV-----EEAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P + P S T + C+ K W K
Sbjct: 515 AKGKTAVTANLDIRNATKLRISPKNPRVP-RSHTLELRCEST---CDSYLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIYSC+A ++ +L P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKETTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
LL + A + ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 LLSL--APYVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
P ++ Y+ +V A N LG G P S + D P AP G + ++W +
Sbjct: 791 PTVYAPYDVQVQAVNHLGSG-PEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSI 849
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQ 466
P+++ + Y+I W K KE + + R +PS ++E+ + V
Sbjct: 850 PKDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVL 909
Query: 467 AINDVGPGPESEVVTI 482
A N G GPESE T
Sbjct: 910 AYNSKGAGPESEPYTF 925
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 98/265 (36%), Gaps = 21/265 (7%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + G L E ++ Y + + Y RD +Y+C
Sbjct: 274 LLLECFAEGLPTPQVDWNKLGGDLPKGR---ETKENYGKTLKIENVSY----RDKGIYRC 326
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L + + V P + K+P G G + C E P+P W+ +
Sbjct: 327 TANNFLGSATHDFHITVEE-PPRWTKKPQSGVYSTGSSG--ILLCEAEGEPEPTIKWRVN 383
Query: 127 GNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYYE 184
G+ I + + + + + + + +Y C A+N HG + + V+ P
Sbjct: 384 GSPIEKNPFAGDVVSSREISFTNLQPNHTAVYQCEASNAHGTILANANIDVVDVRPLIQT 443
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLL 243
+ + L C + V++ + LE +I + G L
Sbjct: 444 EDEENYATVVGYSAFLYCEFFSSPEAIVSWQKVE--------EAKPLEGRRYHIYENGTL 495
Query: 244 EITNASFADAGEYECVVKSTVGKIS 268
+I + DAG Y C V++ GK +
Sbjct: 496 QINRTTEEDAGSYSCWVENAKGKTA 520
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 30/71 (42%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P P+ W K G + G K L I VS D G
Sbjct: 263 ESSLTILKGETLLLECFAEGLPTPQVDWNKLGGDLPKGRETKENYGKTLKIENVSYRDKG 322
Query: 156 IYSCTATNVHG 166
IY CTA N G
Sbjct: 323 IYRCTANNFLG 333
>gi|395824573|ref|XP_003785537.1| PREDICTED: neural cell adhesion molecule L1-like protein [Otolemur
garnettii]
Length = 1209
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 217/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG ++ P D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPIDKHPFP---GDVVFPRE--ISFINLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + E YA G N + C A+P+ W+K
Sbjct: 406 IHGTILANANIDVVDVRPLILTE--DGENYATVVGYNAFLHCEFFASPEAIVSWQKVEEA 463
Query: 130 IGSGGRRK-IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I ENG L IS + DD+G YSC N G L + + + P
Sbjct: 464 KPLEGRRHWIHENGTLQISSTTEDDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
I L+L +C +H ++ L ++ W +G ++N E I IDG L
Sbjct: 523 NPRIPKLHVLELHCESKCDSHLKDSLKLS--WNKDGEA---FEMNGTEDGRIIIDGANLT 577
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + D G Y CV ++ + I+ T + V P P + + + S + W G
Sbjct: 578 ISNVTLEDQGVYSCVAQTALDSIAAGTQLTVLDVPDPPENLHLSDRENRSVRLTWEAGDD 637
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
+ I+ Y I N E +E+ R G K ++ L P+ Y+F+V A
Sbjct: 638 HNSNISEYIIEFEGN-------KEEPGRWEELTRVQG-KATTVILPLAPYVRYQFRVKAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G EPS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGKSEPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQA+N +G GPE VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVKVQAVNQLGSGPEPLSVTLY 803
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 190/495 (38%), Gaps = 59/495 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 445 CEFFASPEAIVSWQKV-----EEAKPLEGRRHWIHENGTLQISSTT-EDDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 499 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHVLEL-HCESKCDSHLKDSLKLSWNK 554
Query: 126 DGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG G+ R I + NL IS V+ +D G+YSC A + +L VL P
Sbjct: 555 DGEAFEMNGTEDGRIIIDGANLTISNVTLEDQGVYSCVAQTALDSIAAGTQLTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL + G
Sbjct: 615 PENL--HLSDRENRSVRLTWEAGDDHNSNISEYIIEFEGNKEEPGRWEEL----TRVQGK 668
Query: 242 LLEITNASFADAGEYECVVKST--VGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ A Y+ VK+ VGK ++ + E PP P ++V
Sbjct: 669 ATTVI-LPLAPYVRYQFRVKAVNEVGKSEPSQPSDHHETPPAAPDKNPQNIRVQASQPKE 727
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 728 MIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 772
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ P ++ Y+ KV A N+LG G P S + D P AP G + ++W
Sbjct: 773 MTPTVYAPYDVKVQAVNQLGSG-PEPLSVTLYSGEDYPDTAPVIRGVDVINSTLVKVTWS 831
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVK 464
P+P+++ + Y+I W K KE + A R +PS ++E+ +
Sbjct: 832 PIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNFLRFAGQRNSGMVPSLDAFSEFHLT 891
Query: 465 VQAINDVGPGPESEV 479
V A N G GPESE
Sbjct: 892 VLAYNSKGAGPESEA 906
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 116/297 (39%), Gaps = 50/297 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ TY+W ++ + P + D R + +N T + N Y+C
Sbjct: 57 CEAKGNPEPTYTWTKDDK-------PFDLSDPRIIVFNNSGTFKIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGVAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPQGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIQQDERVYMSQKGDLYFANVEDKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQ------LPP---------KITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVR 222
+ +Q LPP +T+ L L C A E L +I W G
Sbjct: 226 SSNSIKQRKPRLLLPPTESGSGSKSSVTVLKGDTLLLECFA---EGLPTPHIDWKKLG-- 280
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
DL + N N L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 ---GDLPKERDTNYN---KTLKIENVSYRDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 56/150 (37%), Gaps = 8/150 (5%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
++ P + N +K R L L P+ +S +G + + C E P
Sbjct: 216 QKMPMKLTVNSSNSIKQRKPR-----LLLPPTESGSGSKSSVTVLKGDTLLLECFAEGLP 270
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
P WKK G + R N L I VS D G Y CTA+N G +IV
Sbjct: 271 TPHIDWKKLGGDLPK--ERDTNYNKTLKIENVSYRDKGNYRCTASNFLGTATHDFHVIV- 327
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTE 207
P ++ + P + + L C A E
Sbjct: 328 EEPPHWTKKPQSGVYSTGSSGILLCEAEGE 357
>gi|194221130|ref|XP_001497302.2| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Equus caballus]
Length = 1209
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 216/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG + + + ++ L P A+YQC A N
Sbjct: 352 CEAEGEPEPTIKWRVNGSPIEKNPFAGD-----VVSSREISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + ++C ++P+ W+K
Sbjct: 406 AHGTILANANIDVVDVRPLIQTE--DEENYATVVGYSAFLYCEFFSSPEAIVSWQKVEEA 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAKGKTAVTANLDIRNA-TKLRISPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ L+LRC + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C ++ + ++ T V + P P + + E S + W G +
Sbjct: 580 NVTLEDKGIYSCSAQTALDSVADITQVTILDVPDPPENLHLSERQNRSVRLTWEAGDDHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G KE ++ L P+ Y+F+VIA
Sbjct: 640 SNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVLLSLAPYVRYQFRVIAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+V+VQA+N +G GPE + V ++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAVNHLGSGPEPQSVVLY 803
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 188/496 (37%), Gaps = 55/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 445 CEFFSSPEAIVSWQKV-----EEAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P + P S T + C+ K W K
Sbjct: 499 AKGKTAVTANLDIRNATKLRISPKNPRVP-RSHTLELRCEST---CDSYLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIYSC+A ++ +L P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKETTV 672
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
LL + A + ++ + + VG+ ++ + E PP P ++V
Sbjct: 673 LLSL--APYVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMI 729
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 730 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
P ++ Y+ +V A N LG G P S + D P AP G + ++W +
Sbjct: 775 PTVYAPYDVQVQAVNHLGSG-PEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSI 833
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKVQ 466
P+++ + Y+I W K KE + + R +PS ++E+ + V
Sbjct: 834 PKDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVL 893
Query: 467 AINDVGPGPESEVVTI 482
A N G GPESE T
Sbjct: 894 AYNSKGAGPESEPYTF 909
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 113/293 (38%), Gaps = 42/293 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQCR 67
CEA G P+ T++W ++ + N L D + + +N T + N Y+C
Sbjct: 57 CEAKGNPEPTFTWTKDDKPFN-----LSDP-QIIVSNNSGTFKIPNEGHISHFQGKYRCF 110
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 111 ASNKLGVAVSEEIEFIVPNVPKFPKEKIEPLEVE----EGDAIVLPCNPPKGLPPLHIYW 166
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLHG 179
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 167 MNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNS 226
Query: 180 PSYYEQ------LPP-------KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+ +Q LPP +TI L L C A E L W G G++
Sbjct: 227 SNSIKQRKPRLLLPPPESGGESSLTILKGETLLLECFA--EGLPTPQVDWNKLG---GDL 281
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
N G L+I N S+ D G Y C + +G + + VE PP
Sbjct: 282 PKGRETKENY---GKTLKIENVSYRDKGIYRCTANNFLGSATHDFHITVEEPP 331
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 98/265 (36%), Gaps = 21/265 (7%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + G L E ++ Y + + Y RD +Y+C
Sbjct: 258 LLLECFAEGLPTPQVDWNKLGGDLPKGR---ETKENYGKTLKIENVSY----RDKGIYRC 310
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L + + V P + K+P G G + C E P+P W+ +
Sbjct: 311 TANNFLGSATHDFHITVEE-PPRWTKKPQSGVYSTGSSG--ILLCEAEGEPEPTIKWRVN 367
Query: 127 GNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYYE 184
G+ I + + + + + + + +Y C A+N HG + + V+ P
Sbjct: 368 GSPIEKNPFAGDVVSSREISFTNLQPNHTAVYQCEASNAHGTILANANIDVVDVRPLIQT 427
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLL 243
+ + L C + V++ + LE +I + G L
Sbjct: 428 EDEENYATVVGYSAFLYCEFFSSPEAIVSWQKVE--------EAKPLEGRRYHIYENGTL 479
Query: 244 EITNASFADAGEYECVVKSTVGKIS 268
+I + DAG Y C V++ GK +
Sbjct: 480 QINRTTEEDAGSYSCWVENAKGKTA 504
>gi|329663127|ref|NP_001192470.1| neural cell adhesion molecule L1-like protein precursor [Bos
taurus]
Length = 1225
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 219/484 (45%), Gaps = 43/484 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAMYQC 66
CEA G P+ T W NG LP+E R +V++ I + N + + A+YQC
Sbjct: 368 CEAEGEPEPTIKWRVNG-------LPIE---RNPYSGDVMSPGEISFTNVQPNHTAVYQC 417
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKK 125
A N T ++A + VL ++P + + E YA G + + C A+P+ W+K
Sbjct: 418 EATNVHGTILANANIDVLDVRPLIQT--ADEENYATVVGYSAFLHCEFFASPEAIVSWQK 475
Query: 126 DGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GRR + ENG L I+ + +D+G YSC N G L + + S
Sbjct: 476 VEEAKPLDGRRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATSLRV 535
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
P + L+L C + + L + W+ +G ++N E I IDG
Sbjct: 536 S-PKNPRVPKSHTLELHCESQCDSHLKYSLKLSWSKDGEA---FEMNGTEDGRIIIDGAN 591
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I+N + D G Y C + + ++ T V V P P + + E S + W G
Sbjct: 592 LTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDPPENLHLSERQNRSVRLTWEAG 651
Query: 303 ATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
+ I+ Y + N W +E+ R G KE ++ L P+ Y+F+
Sbjct: 652 DDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRYQFR 701
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA NE+G +PS PS + TP P + P I + ++ I WEPL +QN P +
Sbjct: 702 VIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGL 761
Query: 421 YYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE +
Sbjct: 762 EYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPEPQS 815
Query: 480 VTIW 483
V ++
Sbjct: 816 VILY 819
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 187/497 (37%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PL D RY + +N E D Y C +N
Sbjct: 461 CEFFASPEAIVSWQKV-----EEAKPL-DGRRYHVHENGTLQITETTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P K P +++ E + C+ K W K
Sbjct: 515 AKGKTAVTANLDIRNATSLRVSP---KNPRVPKSHTLEL-HCESQCDSHLKYSLKLSWSK 570
Query: 126 DGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG G+ R I + NL IS V+ +D GIYSC+A ++ VL P
Sbjct: 571 DGEAFEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL + G
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGK 684
Query: 242 LLEITNASFADAGEYE--CVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ S A Y+ + + VG+ + + E PP P ++V
Sbjct: 685 ETTVV-LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKE 743
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 744 MIIKWEPLKAMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 788
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ +V A N LG G P PQ + D P AP G + +
Sbjct: 789 MTPAVYAPYDVQVQAINHLGSG----PEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKV 844
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E+ + Y++ W K KE + + R +PS ++E+
Sbjct: 845 TWSTIPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEF 904
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 905 HLTVLAYNSKGAGPESE 921
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 110/309 (35%), Gaps = 58/309 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQCR 67
C A G P+ + W ++ + N L D R + +N T R N Y+C
Sbjct: 57 CVAKGNPEPKFLWNKDDKPFN-----LSDP-RIIVSNNGGTFRIPNDGHISHFQGKYRCF 110
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 111 ASNKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIYW 166
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------TNVHGM-------- 167
+ + I R + + G+L + V DS Y C A T V M
Sbjct: 167 MNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNS 226
Query: 168 -----DESKGRLIVLHGPSYYEQ-----LPPK-------ITIAAHRNLQLRCSAHTEELL 210
D S I+ S ++ LPP +TI L L C A E L
Sbjct: 227 LKHVNDSSSSTEIISKANSIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFA--EGLP 284
Query: 211 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
W G G++ N G L+I N S D G Y C + +G +
Sbjct: 285 TPQVDWNKMG---GDLPKGRETKENY---GKTLKIENVSSQDKGTYRCTASNVLGSATHD 338
Query: 271 TTVIVEGPP 279
V VE PP
Sbjct: 339 FQVTVEEPP 347
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 10/174 (5%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSSQDKGTYRCTAS 329
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
NV G + + + P ++ + P + + L C A E + W NG+
Sbjct: 330 NVLG-SATHDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTIK--WRVNGLP 386
Query: 223 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I N ++ +P G + TN Y+C + G I + V
Sbjct: 387 IERNPYSGDVMSP------GEISFTNVQPNHTAVYQCEATNVHGTILANANIDV 434
>gi|426339216|ref|XP_004033554.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Gorilla gorilla gorilla]
Length = 1171
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 220/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + F ++ G+ E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SDISEYIV---------EFEGNKEEPGRWDELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 192/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P +++ E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKSHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + D++ YI G + +EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSDISEYIVEFEGNKEEPGRWDELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG V + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPVVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 250 KPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG + N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPVDN 389
>gi|426339214|ref|XP_004033553.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Gorilla gorilla gorilla]
Length = 1225
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 220/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + F ++ G+ E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SDISEYIV---------EFEGNKEEPGRWDELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 192/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P +++ E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKSHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + D++ YI G + +EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSDISEYIVEFEGNKEEPGRWDELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG V + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPVVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 77 SSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKFVWKK 125
SS+ + + S K+R L T +G ++TI C E P P+ W K
Sbjct: 233 SSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNK 292
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G + G K L I VS D G Y CTA+N G +IV P + ++
Sbjct: 293 IGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK 352
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P + N L C A E + W NG + N
Sbjct: 353 -PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 389
>gi|426339212|ref|XP_004033552.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Gorilla gorilla gorilla]
Length = 1209
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 220/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 406 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 580 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 639
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + F ++ G+ E+ R G+K I L P+ Y+F+VIA
Sbjct: 640 SDISEYIV---------EFEGNKEEPGRWDELTRVQGKKTTVILP-LAPFVRYQFRVIAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 803
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 192/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 445 CEFFASPEAVVSWQKV-----EEVKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P +++ E + C+ K W K
Sbjct: 499 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKSHMLEL-HCESKCDSHLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + D++ YI G + +EL
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGADHNSDISEYIVEFEGNKEEPGRWDELTRVQGKKTTV 672
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 673 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 729
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 730 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 775 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 830
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 831 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 890
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 891 TVLAYNSKGAGPESE 905
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 111/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG V + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPVVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGLPTPQVDWNKIG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 LPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 85/224 (37%), Gaps = 21/224 (9%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-NQLK 73
G+P + W N EL + E +D+ Y Q L + + Y C A +L+
Sbjct: 158 GLPPLHIYWM-NIELEHIE----QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLR 212
Query: 74 TRYSSAQLRV-LTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKF 121
T +++ + S K+R L T +G ++TI C E P P+
Sbjct: 213 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQV 272
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K G + G K L I VS D G Y CTA+N G +IV P
Sbjct: 273 DWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPR 332
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ ++ P + N L C A E + W NG + N
Sbjct: 333 WTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 373
>gi|2190958|gb|AAB60937.1| neural cell adhesion molecule [Homo sapiens]
Length = 1224
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGREAKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 77 SSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKFVWKK 125
SS+ + + S K+R L T +G ++TI C E P P+ W K
Sbjct: 233 SSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNK 292
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G + G K L I VS D G Y CTA+N G +IV P + ++
Sbjct: 293 IGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK 352
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P + N L C A E + W NG + N
Sbjct: 353 -PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 389
>gi|296474989|tpg|DAA17104.1| TPA: cell adhesion molecule with homology to L1CAM (close homolog
of L1)-like [Bos taurus]
Length = 1225
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 219/484 (45%), Gaps = 43/484 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAMYQC 66
CEA G P+ T W NG LP+E R +V++ I + N + + A+YQC
Sbjct: 368 CEAEGEPEPTIKWRVNG-------LPIE---RNPYSGDVMSPGEISFTNVQPNHTAVYQC 417
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKK 125
A N T ++A + VL ++P + + E YA G + + C A+P+ W+K
Sbjct: 418 EATNVHGTILANANIDVLDVRPLIQT--ADEENYATVVGYSAFLHCEFFASPEAIVSWQK 475
Query: 126 DGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GRR + ENG L I+ + +D+G YSC N G L + + S
Sbjct: 476 VEEAKPLDGRRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATSLRV 535
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
P + L+L C + + L + W+ +G ++N E I IDG
Sbjct: 536 S-PKNPRVPKSHTLELHCESQCDSHLKYSLKLSWSKDGEA---FEMNGTEDGRIIIDGAN 591
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I+N + D G Y C + + ++ T V V P P + + E S + W G
Sbjct: 592 LTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDPPENLHLSERQNRSVRLTWEAG 651
Query: 303 ATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
+ I+ Y + N W +E+ R G KE ++ L P+ Y+F+
Sbjct: 652 DDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRYQFR 701
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA NE+G +PS PS + TP P + P I + ++ I WEPL +QN P +
Sbjct: 702 VIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGL 761
Query: 421 YYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE +
Sbjct: 762 EYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPEPQS 815
Query: 480 VTIW 483
V ++
Sbjct: 816 VILY 819
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 187/497 (37%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PL D RY + +N E D Y C +N
Sbjct: 461 CEFFASPEAIVSWQKV-----EEAKPL-DGRRYHVHENGTLQITETTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P K P +++ E + C+ K W K
Sbjct: 515 AKGKTAVTANLDIRNATSLRVSP---KNPRVPKSHTLEL-HCESQCDSHLKYSLKLSWSK 570
Query: 126 DGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG G+ R I + NL IS V+ +D GIYSC+A ++ VL P
Sbjct: 571 DGEAFEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL + G
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGK 684
Query: 242 LLEITNASFADAGEYE--CVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ S A Y+ + + VG+ + + E PP P ++V
Sbjct: 685 ETTVV-LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKE 743
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 744 MIIKWEPLKAMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 788
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ +V A N LG G P PQ + D P AP G + +
Sbjct: 789 MTPAVYAPYDVQVQAINHLGSG----PEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKV 844
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E+ + Y++ W K KE + + R +PS ++E+
Sbjct: 845 TWSTIPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEF 904
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 905 HLTVLAYNSKGAGPESE 921
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 110/309 (35%), Gaps = 58/309 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQCR 67
C A G P+ + W ++ + N L D R + +N T R N Y+C
Sbjct: 57 CVAKGNPEPKFLWNKDDKPFN-----LSDP-RIIVSNNGGTFRIPNDGHISHFQGKYRCF 110
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 111 ASNKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIYW 166
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------TNVHGM-------- 167
+ + I R + + G+L + V DS Y C A T V M
Sbjct: 167 MNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNS 226
Query: 168 -----DESKGRLIVLHGPSYYEQ-----LPPK-------ITIAAHRNLQLRCSAHTEELL 210
D S I+ S ++ LPP +TI L L C A E L
Sbjct: 227 LKHVNDSSSSTEIISKANSIKQRKPRLLLPPPESGSESFVTILKGDTLLLECFA--EGLP 284
Query: 211 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
W G G++ N G L+I N S D G Y C + +G +
Sbjct: 285 TPQVDWNKMG---GDLPKGRETKENY---GKTLKIENVSSQDKGTYRCTASNVLGSATHD 338
Query: 271 TTVIVEGPP 279
V VE PP
Sbjct: 339 FQVTVEEPP 347
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 10/174 (5%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSSQDKGTYRCTAS 329
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
NV G + + + P ++ + P + + L C A E + W NG+
Sbjct: 330 NVLG-SATHDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTIK--WRVNGLP 386
Query: 223 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I N ++ +P G + TN Y+C + G I + V
Sbjct: 387 IERNPYSGDVMSP------GEISFTNVQPNHTAVYQCEATNVHGTILANANIDV 434
>gi|119584273|gb|EAW63869.1| cell adhesion molecule with homology to L1CAM (close homolog of
L1), isoform CRA_b [Homo sapiens]
Length = 1224
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 77 SSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKFVWKK 125
SS+ + + S K+R L T +G ++TI C E P P+ W K
Sbjct: 233 SSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNK 292
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G + G K L I VS D G Y CTA+N G +IV P + ++
Sbjct: 293 IGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK 352
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P + N L C A E + W NG + N
Sbjct: 353 -PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 389
>gi|114585162|ref|XP_001136954.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 6
[Pan troglodytes]
gi|410288982|gb|JAA23091.1| cell adhesion molecule with homology to L1CAM (close homolog of L1)
[Pan troglodytes]
Length = 1225
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 219/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS ++ TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 77 SSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKFVWKK 125
SS+ + + S K+R L T +G ++TI C E P P+ W K
Sbjct: 233 SSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNK 292
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G + G K L I VS D G Y CTA+N G +IV P + ++
Sbjct: 293 IGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK 352
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P + N L C A E + W NG + N
Sbjct: 353 -PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 389
>gi|397522461|ref|XP_003831285.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Pan paniscus]
Length = 1225
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 219/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS ++ TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y++ W K KE + + R +PS ++E+ +
Sbjct: 847 STIPKDRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 77 SSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKFVWKK 125
SS+ + + S K+R L T +G ++TI C E P P+ W K
Sbjct: 233 SSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNK 292
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G + G K L I VS D G Y CTA+N G +IV P + +Q
Sbjct: 293 IGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKQ 352
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P + N L C A E + W NG + N
Sbjct: 353 -PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 389
>gi|193785234|dbj|BAG54387.1| unnamed protein product [Homo sapiens]
Length = 1113
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 218/478 (45%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 406 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG---EAFEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 580 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 639
Query: 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I+ Y + N E +E+ R G+K I L P+ Y+F+VIA NE
Sbjct: 640 SNISEYIVEFEGN-------KEEPGRWEELTRVQGKKTTVILP-LAPFVRYQFRVIAVNE 691
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++ W
Sbjct: 692 VGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRVTW 751
Query: 427 RKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 752 KPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 803
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 187/493 (37%), Gaps = 57/493 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 445 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+ +A L + L + P + P L E C+ K W
Sbjct: 499 AIGKTAVTANLDIRNATKLRVSPKNPRIPKLHMLELHCESK-----CDSHLKHSLKLSWS 553
Query: 125 KDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
KDG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 554 KDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 613
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDG 240
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 614 PPENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTT 671
Query: 241 GLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSA 295
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 672 VILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEM 728
Query: 296 TIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVL 351
I+W P Y++ TW V +E V +T R V+
Sbjct: 729 IIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VM 773
Query: 352 VP--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
P ++ Y+ KV A N+LG G P S + D P AP G + ++W
Sbjct: 774 TPAVYAPYDVKVQAINQLGSG-PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWST 832
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKV 465
+P+++ + Y+I W K KE + + R +PS ++E+ + V
Sbjct: 833 VPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTV 892
Query: 466 QAINDVGPGPESE 478
A N G GPESE
Sbjct: 893 LAYNSKGAGPESE 905
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 111/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGLPTPQVDWNKIG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 LPKGREAKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 85/224 (37%), Gaps = 21/224 (9%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-NQLK 73
G+P + W N EL + E +D+ Y Q L + + Y C A +L+
Sbjct: 158 GLPPLHIYWM-NIELEHIE----QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLR 212
Query: 74 TRYSSAQLRV-LTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKF 121
T +++ + S K+R L T +G ++TI C E P P+
Sbjct: 213 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQV 272
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K G + G K L I VS D G Y CTA+N G +IV P
Sbjct: 273 DWNKIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPR 332
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ ++ P + N L C A E + W NG + N
Sbjct: 333 WTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 373
>gi|397522463|ref|XP_003831286.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Pan paniscus]
Length = 1171
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 219/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS ++ TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y++ W K KE + + R +PS ++E+ +
Sbjct: 847 STIPKDRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 250 KPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + +Q P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKQ-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG + N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPVDN 389
>gi|27894376|ref|NP_006605.2| neural cell adhesion molecule L1-like protein isoform 1 precursor
[Homo sapiens]
Length = 1224
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 77 SSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKFVWKK 125
SS+ + + S K+R L T +G ++TI C E P P+ W K
Sbjct: 233 SSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNK 292
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G + G K L I VS D G Y CTA+N G +IV P + ++
Sbjct: 293 IGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK 352
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P + N L C A E + W NG + N
Sbjct: 353 -PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 389
>gi|114585164|ref|XP_001136570.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Pan troglodytes]
Length = 1209
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 219/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 406 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 580 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 640 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS ++ TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 803
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 445 CEFFASPEAVVSWQKV-----EEVKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 499 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 672
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 673 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMI 729
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 730 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 775 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 830
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 831 STIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 890
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 891 TVLAYNSKGAGPESE 905
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 110/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ +SW ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPIFSWTKDGN-------PFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGLPTPQVDWNKIG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 LPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 85/224 (37%), Gaps = 21/224 (9%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-NQLK 73
G+P + W N EL + E +D+ Y Q L + + Y C A +L+
Sbjct: 158 GLPPLHIYWM-NIELEHIE----QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLR 212
Query: 74 TRYSSAQLRV-LTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKF 121
T +++ + S K+R L T +G ++TI C E P P+
Sbjct: 213 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQV 272
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K G + G K L I VS D G Y CTA+N G +IV P
Sbjct: 273 DWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPR 332
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ ++ P + N L C A E + W NG + N
Sbjct: 333 WTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 373
>gi|358438179|ref|NP_001240316.1| neural cell adhesion molecule L1-like protein isoform 2 precursor
[Homo sapiens]
gi|317373561|sp|O00533.4|CHL1_HUMAN RecName: Full=Neural cell adhesion molecule L1-like protein;
AltName: Full=Close homolog of L1; Contains: RecName:
Full=Processed neural cell adhesion molecule L1-like
protein; Flags: Precursor
Length = 1208
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 406 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 580 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 640 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 803
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 445 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 499 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 672
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 673 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 729
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 730 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 775 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 830
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 831 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 890
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 891 TVLAYNSKGAGPESE 905
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 111/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGLPTPQVDWNKIG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 LPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 63/172 (36%), Gaps = 18/172 (10%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG----EGGNVTIFCNP 113
++ P + N +K R KP P ES + + +G + + C
Sbjct: 216 QKMPMKLTVNSSNSIKQR-----------KPKLLLPPTESGSESSITILKGEILLLECFA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
E P P+ W K G + G K L I VS D G Y CTA+N G
Sbjct: 265 EGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFH 324
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+IV P + ++ P + N L C A E + W NG + N
Sbjct: 325 VIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 373
>gi|397522459|ref|XP_003831284.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Pan paniscus]
Length = 1209
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 219/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 406 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 580 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 640 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS ++ TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 803
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 445 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 499 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 672
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 673 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMI 729
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 730 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 775 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 830
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y++ W K KE + + R +PS ++E+ +
Sbjct: 831 STIPKDRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 890
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 891 TVLAYNSKGAGPESE 905
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 111/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIMTSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGLPTPQVDWNKIG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 LPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 85/224 (37%), Gaps = 21/224 (9%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-NQLK 73
G+P + W N EL + E +D+ Y Q L + + Y C A +L+
Sbjct: 158 GLPPLHIYWM-NIELEHIE----QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLR 212
Query: 74 TRYSSAQLRV-LTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKF 121
T +++ + S K+R L T +G ++TI C E P P+
Sbjct: 213 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQV 272
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K G + G K L I VS D G Y CTA+N G +IV P
Sbjct: 273 DWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPR 332
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q P + N L C A E + W NG + N
Sbjct: 333 WTKQ-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 373
>gi|62088238|dbj|BAD92566.1| Neural cell adhesion molecule variant [Homo sapiens]
Length = 1210
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 354 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 408 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 465
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 466 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 524
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 525 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 581
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 582 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 641
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 642 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 691
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 692 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 751
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 752 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 805
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 447 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 500
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 501 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 556
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 557 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 616
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 617 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 674
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 675 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 731
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 732 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 776
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 777 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 832
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 833 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 892
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 893 TVLAYNSKGAGPESE 907
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 111/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 59 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 111
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 112 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 167
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 168 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 227
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 228 SSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGLPTPQVDWNKIG---GD 282
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 283 LPKGREAKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 333
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 85/224 (37%), Gaps = 21/224 (9%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-NQLK 73
G+P + W N EL + E +D+ Y Q L + + Y C A +L+
Sbjct: 160 GLPPLHIYWM-NIELEHIE----QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLR 214
Query: 74 TRYSSAQLRV-LTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKF 121
T +++ + S K+R L T +G ++TI C E P P+
Sbjct: 215 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQV 274
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K G + G K L I VS D G Y CTA+N G +IV P
Sbjct: 275 DWNKIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPR 334
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ ++ P + N L C A E + W NG + N
Sbjct: 335 WTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 375
>gi|85397970|gb|AAI04919.1| CHL1 protein [Homo sapiens]
gi|168277596|dbj|BAG10776.1| neural cell adhesion molecule L1-like protein precursor [synthetic
construct]
gi|219520164|gb|AAI43497.1| CHL1 protein [Homo sapiens]
Length = 1208
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 406 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 580 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 640 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 803
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 445 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 499 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 672
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 673 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 729
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 730 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 775 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 830
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 831 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 890
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 891 TVLAYNSKGAGPESE 905
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 111/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGLPTPQVDWNKIG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 LPKGREAKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 85/224 (37%), Gaps = 21/224 (9%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-NQLK 73
G+P + W N EL + E +D+ Y Q L + + Y C A +L+
Sbjct: 158 GLPPLHIYWM-NIELEHIE----QDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLR 212
Query: 74 TRYSSAQLRV-LTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKF 121
T +++ + S K+R L T +G ++TI C E P P+
Sbjct: 213 TIVQKMPMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQV 272
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K G + G K L I VS D G Y CTA+N G +IV P
Sbjct: 273 DWNKIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPR 332
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ ++ P + N L C A E + W NG + N
Sbjct: 333 WTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 373
>gi|358438315|ref|NP_001240317.1| neural cell adhesion molecule L1-like protein isoform 3 precursor
[Homo sapiens]
Length = 1171
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 250 KPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG + N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPVDN 389
>gi|326679087|ref|XP_001921978.2| PREDICTED: neurofascin-like [Danio rerio]
Length = 1150
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 209/485 (43%), Gaps = 49/485 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDR---YFIQDNVLTIRYLNPERDPAMYQCR 67
C A G+P W NGE P+ D R + + LT R + P+ A++QC
Sbjct: 346 CRADGIPRPQIQWLVNGE-------PISDAPRSPGRQVSGDTLTFRGVVPD-SAAVFQCN 397
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKD 126
A N ++A L V+ +KP E + GN+T+ C +PKP W K
Sbjct: 398 ASNPYGYIMTNAFLAVMDMKPRLLGP--RDELFKTTEGNLTLLDCPYFGSPKPVLRWSKG 455
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G GGR + NG L I D G Y C A+NV G DE + +L V +
Sbjct: 456 GVGTLEGGRYRTLPNGTLEIRNTKLQDQGAYVCVASNVIGRDEKEVQLEV--------KE 507
Query: 187 PPKITIAAHRNLQLR-------CSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P KI A H + +R C + LDV W + + +G + E+
Sbjct: 508 PIKIIRAPHNTVVIRGSLARFDCKIKFDTSLDVTVTWLKDKKFLILGRRMTKDEES---- 563
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y C VKS + +++T + V P P +++ + + S +
Sbjct: 564 -----LSIADVYRRDEGVYTCRVKSELEEVTTSAKLTVMDRPDPPTDLEISDPSERSVRL 618
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
WT G +N PI Y I N + ++ + K + Y G + I L P+ Y
Sbjct: 619 TWTPGLSNHSPIKEYLIQYTENLLADYWLLPSG--WKNLTSYPGSLNSVILQ-LTPFVEY 675
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI--GDLSISWEPLPREKQ 415
F+VIA N +G +PS S Y T P P I G G + ++ ISWEPL +
Sbjct: 676 TFRVIAVNGIGPSKPSWASEYYQTGGAVPDAIPRNIQGLGYGVFRNNMEISWEPLEYREW 735
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N P + Y ++WR+++ E K Y I +T YE+KVQAIN G GP
Sbjct: 736 NGPKLGYMVWWRRRD----SREEWKNYTTYWWCSTIIYDTDTFTPYEIKVQAINFFGYGP 791
Query: 476 ESEVV 480
ES VV
Sbjct: 792 ESPVV 796
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 110/289 (38%), Gaps = 36/289 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL-NPERDPAMYQCRAK 69
CEA G P ++W RNG LN P Q + L I + P+ +YQC A
Sbjct: 53 CEATGNPPPVFTWTRNGVYLNVARDP---QVSMRWRSGTLEIFFWGRPDDYEGIYQCTAT 109
Query: 70 NQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW-KKD 126
N+ T SS LRV + ++ K LE T G + + CN PE PKP W
Sbjct: 110 NEFGTALSSYINLRVSKAR-TWLKEYLEPVTVV-VGLPLILPCNPPEGPPKPDTYWLNST 167
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA----TNVHG------MDESKGRLI 175
+ I R ENG+L S + DD+ Y C A TN + R+
Sbjct: 168 MSPIRQDRRVSKSENGDLYFSSIVADDALTNYVCVARFPFTNTIQQKPPLILQVLTARMA 227
Query: 176 VLHGPSYYEQLPPKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
P + L PK T + L L C A + WT + M +
Sbjct: 228 AHTAPKF---LKPKGTASTRIAMLGEELILECFAAGVPTPSIK--WTKD---YEEMTMTG 279
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N N L I + D G+Y C + +G + TV V+ P
Sbjct: 280 KKLENFN---KTLRIKKIAMDDGGDYICTASNRMGSLDHIITVRVKSVP 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 11/241 (4%)
Query: 38 EDQDRYF---IQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP 94
E+ D YF + D+ LT Y+ R P + K L + +A++ T K +
Sbjct: 181 ENGDLYFSSIVADDALT-NYVCVARFPFTNTIQQKPPLILQVLTARMAAHTAPKFLKPKG 239
Query: 95 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDS 154
S A G + + C P P W KD + G++ N L I ++ DD
Sbjct: 240 TASTRIAMLGEELILECFAAGVPTPSIKWTKDYEEMTMTGKKLENFNKTLRIKKIAMDDG 299
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y CTA+N G + + V P + E+ P + ++ + C A +
Sbjct: 300 GDYICTASNRMGSLDHIITVRVKSVPFWLEK-PESLVLSRDDGGSMVCRADGIPRPQIQ- 357
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
W NG I + +P + G L A ++C + G I T +
Sbjct: 358 -WLVNGEPISDAP----RSPGRQVSGDTLTFRGVVPDSAAVFQCNASNPYGYIMTNAFLA 412
Query: 275 V 275
V
Sbjct: 413 V 413
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N GYG P SP + D+P APS + + L++ WEP+ R
Sbjct: 774 FTPYEIKVQAINFFGYG-PESPVVIGYSGEDRPVAAPSELSVSDIESTTLTVHWEPVARA 832
Query: 414 KQNAPNIYYKI-FWRKKN 430
YK+ +WR+ +
Sbjct: 833 DIMGEIKEYKVYYWRESS 850
>gi|193697717|ref|XP_001944384.1| PREDICTED: neuroglian-like [Acyrthosiphon pisum]
Length = 1247
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 206/466 (44%), Gaps = 32/466 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG L+ + R + N +TI L + D Y C A N
Sbjct: 360 CEASGNPEPTIKWIHNGRPLSEAPI----NPRRSVTSNTITITSL-IKNDTGNYGCNATN 414
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ Y + VL L P + P + ET G +TI C PKP W ++ NI
Sbjct: 415 SIGYVYKDVYINVLALAPEITEPPNKVETVDGRA--ITIGCKNFGVPKPHVKWTRN-NIE 471
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+GGR + G+L IS V D+G Y+C ATN +G + G L + + P
Sbjct: 472 LTGGRYTTLDTGDLQISEVGFTDAGNYTCIATNNYGSANASGTLTIKEH-TRITAAPEDY 530
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
+ A C+A ++ L + W I N D E + + + IT
Sbjct: 531 EVVAGSVATFHCTATSDRSLHLNMEWLARDEPI-NFDT---EPRFVKTNDYSMTITKTIE 586
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
D+G Y C+ ++ + + + +IV+ P P + + +K A ++W N PI
Sbjct: 587 LDSGMYTCLARTELDQATASAMLIVQDKPNPPQLLGIT-CNKRDAAVKWQPKGDNRAPIL 645
Query: 311 HYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVP---WSTYEFKVIAGNE 366
Y I T++ TW S++V AS + +VP W+ + F+VIA N+
Sbjct: 646 RYTIEYNTSFAPDTWSVASDNV------------PASGQTYIVPMTPWANFTFRVIAMNK 693
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G PS S T D PY+ P + G +L ISW P+P+ + NAP + Y+++W
Sbjct: 694 IGRSNPSLHSSVCTTQPDVPYKNPENVEAAGTTPSNLVISWTPMPKIEHNAPGLRYRVYW 753
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
K D Q +E + + + I ++ Y Y+VKV A N+ G
Sbjct: 754 --KQDIPGQVWNSEEITDYTVKELVIDNQPTYQRYKVKVVASNEKG 797
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 133/357 (37%), Gaps = 51/357 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P Y W +NG+ + + DR Q ++ P + D YQC A+
Sbjct: 60 CEAEGEPAPKYRWMKNGKNFDWQAY----DDRIAQQPGRGSLTITEPRDEDLGQYQCFAE 115
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW---KK 125
N T S + + V SFK P + A EG + C+P PKP W K
Sbjct: 116 NAWGTATSKSVMVVKAELNSFKDEP-KVYVEAQEGDPFKLVCHPPTGWPKPNVYWLIRNK 174
Query: 126 DGNIIGSGGRRKIFE-NGNLLISPVSRDDS---GIYSCTATNVHGMDESKGRLIVLHGPS 181
DG + R + GNL S V+R D+ Y C A ++ + G + L+
Sbjct: 175 DGGLTTVNNTRMTLDPEGNLWFSNVTRHDTSDGSTYFCYAESLTMSEYKLGNPVNLNVIQ 234
Query: 182 YYE-----QLPPKITIAAHRN--------LQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
E + PP RN ++L C L + +W +G+ I + +
Sbjct: 235 TAETALQNKYPPTQQYVTRRNEVALLDKKVELFCIYGGTPLPET--VWLKDGLPIQSNE- 291
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK--------------ISTKTTVI 274
+ N G L I F D G+Y C V + VG T I
Sbjct: 292 -RVSQGNY---GKSLIIKKVKFEDKGKYTCEVSNGVGSPQSYNIELDVMAMPFFTVVPQI 347
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 331
VEG G ++ TI+W NGRP++ I R + S ++ +
Sbjct: 348 VEGAEGETAVIKCEASGNPEPTIKWIH---NGRPLSEAPINPRRSVTSNTITITSLI 401
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 7/162 (4%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVH 165
V +FC P P+ VW KDG I S R G +L+I V +D G Y+C +N
Sbjct: 264 VELFCIYGGTPLPETVWLKDGLPIQSNERVSQGNYGKSLIIKKVKFEDKGKYTCEVSNGV 323
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
G +S + + ++ +P + A ++C A + W HNG +
Sbjct: 324 GSPQSYNIELDVMAMPFFTVVPQIVEGAEGETAVIKCEASGNPEPTIK--WIHNGRPLSE 381
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
+N P ++ + IT+ D G Y C +++G +
Sbjct: 382 APIN----PRRSVTSNTITITSLIKNDTGNYGCNATNSIGYV 419
>gi|440900721|gb|ELR51796.1| Neural cell adhesion molecule L1-like protein, partial [Bos
grunniens mutus]
Length = 1210
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 224/487 (45%), Gaps = 49/487 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAMYQC 66
CEA G P+ T W NG LP+E R +V++ I + N + + A+YQC
Sbjct: 353 CEAEGEPEPTIKWRVNG-------LPIE---RNPYSGDVMSPGEISFTNVQPNHTAVYQC 402
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKK 125
A N T ++A + VL ++P + + E YA G + + C A+P+ W+K
Sbjct: 403 EASNVHGTILANANIDVLDVRPLIQT--ADEENYATVVGYSAFLHCEFFASPEAIVSWQK 460
Query: 126 DGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY- 183
GRR + ENG L I+ + +D+G YSC N G L + + +
Sbjct: 461 VEEAKPLDGRRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATNLRV 520
Query: 184 ----EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
++P T+ H + +C +H + L ++ W+ +G ++N E I ID
Sbjct: 521 SPKNPRVPKSHTLELH--CESKCDSHLKYSLKLS--WSKDGEA---FEMNGTEDGRIIID 573
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I+N + D G Y C + + ++ T V V P P + + E S + W
Sbjct: 574 GANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDPPENLHLSERQNRSVRLTW 633
Query: 300 TDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
G + I+ Y + N W +E+ R G KE ++ L P+ Y
Sbjct: 634 EAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRY 683
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G +PS PS + TP P + P I + ++ I WEPL +QN
Sbjct: 684 QFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNG 743
Query: 418 PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
P + Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE
Sbjct: 744 PGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPE 797
Query: 477 SEVVTIW 483
+ V ++
Sbjct: 798 PQSVILY 804
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 187/497 (37%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PL D RY + +N E D Y C +N
Sbjct: 446 CEFFASPEAIVSWQKV-----EEAKPL-DGRRYHVHENGTLQITETTEEDAGSYSCWVEN 499
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P K P +++ E + C+ K W K
Sbjct: 500 AKGKTAVTANLDIRNATNLRVSP---KNPRVPKSHTLEL-HCESKCDSHLKYSLKLSWSK 555
Query: 126 DGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG G+ R I + NL IS V+ +D GIYSC+A ++ VL P
Sbjct: 556 DGEAFEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPDP 615
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL + G
Sbjct: 616 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGK 669
Query: 242 LLEITNASFADAGEYE--CVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ S A Y+ + + VG+ + + E PP P ++V
Sbjct: 670 ETTVV-LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKE 728
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 729 MIIKWEPLKAMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 773
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ +V A N LG G P PQ + D P AP G + +
Sbjct: 774 MTPAVYAPYDVQVQAINHLGSG----PEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKV 829
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E+ + Y++ W K KE + + R +PS ++E+
Sbjct: 830 TWSTIPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEF 889
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 890 HLTVLAYNSKGAGPESE 906
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 108/296 (36%), Gaps = 48/296 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQCR 67
C A G P+ + W ++ + N L D R + +N T R N Y+C
Sbjct: 58 CVAKGNPEPKFLWNKDDKPFN-----LSDP-RIIVSNNGGTFRIPNDGHISHFQGKYRCF 111
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 112 ASNKLGIAMSEEIEFIVPNAPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIYW 167
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSC------------------TATN 163
+ + I R + + G+L + V DS Y C T +
Sbjct: 168 MNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNS 227
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ + + K RL++ S E +TI L L C A E L W G
Sbjct: 228 SNSIKQRKPRLLLPPPESGSESF---VTILKGDTLLLECFA--EGLPTPQVDWNKMG--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ N G L+I N S D G Y C + +G + V VE PP
Sbjct: 280 GDLPKGRETKENY---GKTLKIENVSSQDKGTYRCTASNVLGSATHDFQVTVEEPP 332
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 10/174 (5%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 255 KGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSSQDKGTYRCTAS 314
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
NV G + + + P ++ + P + + L C A E + W NG+
Sbjct: 315 NVLG-SATHDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEPEPTIK--WRVNGLP 371
Query: 223 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I N ++ +P G + TN Y+C + G I + V
Sbjct: 372 IERNPYSGDVMSP------GEISFTNVQPNHTAVYQCEASNVHGTILANANIDV 419
>gi|224066631|ref|XP_002186633.1| PREDICTED: neural cell adhesion molecule L1-like protein
[Taeniopygia guttata]
Length = 1225
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 223/481 (46%), Gaps = 34/481 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
A+L CEA G P+ + W NG ++ T + R ++ LT L +D A++
Sbjct: 363 ANLVLLCEAIGNPEPSIQWKLNGMPIDGRTF----RGRVSTREISLTNLQL---QDSAVF 415
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ T +SA + VL + P P E G + + C+ A+P W
Sbjct: 416 QCEATNKHGTILASANVNVLNIAP-LILTPDEENYATVVGYSAFLHCDIFASPAADVRWT 474
Query: 125 KDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KD +I S ++ +NG L I ++DSG Y+C A+N G L +
Sbjct: 475 KDDSIEPLSTFHYELNKNGTLEIRDAKKEDSGSYACWASNSVGKRAITANLDIRDATKLV 534
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGG 241
P + ++ L+C A + L ++ W +G + +N E I +D
Sbjct: 535 -VTPKNPRVLKSHSILLKCQAEYDSHLKHSFKLSWRKDG---DELPVNSTEGGRIILDRD 590
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I++ D G Y CV + + +T +IV P P +Q+ E S + W
Sbjct: 591 TLFISSVLLEDQGVYRCVASTALDSAEAETQLIVLDVPDPPEDLQLSENQNRSVRLSWKA 650
Query: 302 GATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
GA++ P+ I N W W +E+ R G ++ + L P+ Y+F
Sbjct: 651 GASHNSPVNESIIEFEENRWEPERW---------QELSRVPGNDTTALLS-LAPYVNYQF 700
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V++ N +G +PS+PS +Y TP P + P I + ++ + WEPL ++N P
Sbjct: 701 RVVSVNAVGRSQPSTPSLRYATPPAAPDKNPENIRVEASEPNEMVMKWEPLKPMERNGPG 760
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR++ +T++ E +K++ ++V +P+ + YE+KVQA+N++G GPE
Sbjct: 761 LEYKVSWRQRGVETDWNEELVKKH---SLSVRNVPT---FVPYEIKVQAVNNLGSGPEPN 814
Query: 479 V 479
+
Sbjct: 815 I 815
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 191/511 (37%), Gaps = 85/511 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ F P W ++ + PL ++ L IR E D Y C A N
Sbjct: 461 CDIFASPAADVRWTKDDSIE-----PLSTFHYELNKNGTLEIRDAKKE-DSGSYACWASN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPE----AAPKPKF 121
+ R +A L + L + P R L+S + + + C E K
Sbjct: 515 SVGKRAITANLDIRDATKLVVTPK-NPRVLKSHS-------ILLKCQAEYDSHLKHSFKL 566
Query: 122 VWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W+KDG+ + + G R I + L IS V +D G+Y C A+ E++ +LIVL
Sbjct: 567 SWRKDGDELPVNSTEGGRIILDRDTLFISSVLLEDQGVYRCVASTALDSAEAETQLIVLD 626
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P P + ++ ++N +R S +H + + + N R EL
Sbjct: 627 VP----DPPEDLQLSENQNRSVRLSWKAGASHNSPVNESIIEFEEN--RWEPERWQELSR 680
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT-TVIVEGPPGLPG----GVQVV 288
N LL + A + + ++ V + VG+ T ++ PP P ++V
Sbjct: 681 VPGNDTTALLSL--APYVNY-QFRVVSVNAVGRSQPSTPSLRYATPPAAPDKNPENIRVE 737
Query: 289 EVHKTSATIQWTDGATNGR--PITHYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTG 341
++W R P YK+ R T+WN +
Sbjct: 738 ASEPNEMVMKWEPLKPMERNGPGLEYKVSWRQRGVETDWN---------------EELVK 782
Query: 342 RKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
+ S+ NV VP YE KV A N LG G + + Y+ D P APS +
Sbjct: 783 KHSLSVRNVPTFVP---YEIKVQAVNNLGSGPEPNITIGYSG-EDVPDAAPSGVSVEVVN 838
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFW--------RKKNDTEFQSETLKEYGNVGIAVVR 451
+ + W +PR++ YK+ W K++ E T N G+
Sbjct: 839 STLVKVFWFGIPRDRVRGHLRGYKVSWWKTRSMLDGKRHHPEKHFLTFVGDRNSGM---- 894
Query: 452 IPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
IP ++E+ + V A N G GPES V
Sbjct: 895 IPGLEPFSEFHLTVLAFNSRGDGPESSPVVF 925
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 34/269 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P SW + + + E+ + D V D YQC
Sbjct: 275 LLLECIAEGLPTPHLSWVKVTGNMPKDEPETENFGKMLKIDQVTAA-------DEGTYQC 327
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N + +RV P + K+P E Y+ G N+ + C P+P WK +
Sbjct: 328 TASNPMGRARHEFHVRVEE-PPQWLKKP-EGGVYS-VGANLVLLCEAIGNPEPSIQWKLN 384
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G I R + ++ + DS ++ C ATN HG + + VL+ +
Sbjct: 385 GMPIDGRTFRGRVSTREISLTNLQLQDSAVFQCEATNKHGTILASANVNVLN-------I 437
Query: 187 PPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P I N L C DV WT + + L T + +
Sbjct: 438 APLILTPDEENYATVVGYSAFLHCDIFASPAADVR--WTKDD------SIEPLSTFHYEL 489
Query: 239 D-GGLLEITNASFADAGEYECVVKSTVGK 266
+ G LEI +A D+G Y C ++VGK
Sbjct: 490 NKNGTLEIRDAKKEDSGSYACWASNSVGK 518
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 115/317 (36%), Gaps = 63/317 (19%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLP---LEDQDRYFIQDNVLTIRYLNPERDPA 62
D T CEA G P T++W ++G+ N + P + F+ N I
Sbjct: 52 DFTIKCEARGNPQPTFNWTKDGKPFNLSSDPRIVTSNNSGTFVIQNRGIINNFQ-----G 106
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKP 119
Y+C A N L T S ++ P F K PL+ E G +V + CNP P
Sbjct: 107 KYRCFASNVLGTAMSEEIELIVPSVPKFPKEKIEPLDVE----HGDSVILHCNPPKGIPP 162
Query: 120 KFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA--------------- 161
++ D I R + G+L + V DS Y C A
Sbjct: 163 LHIYWMNIDLQHIPQDERVSMSLKGDLYFANVEESDSRSDYCCFAAFPRLRTIVQKMPMT 222
Query: 162 -------------------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
T + + E K +L++ P +T+ L L C
Sbjct: 223 LKVSRLKHANDSGSPNAAVTKANFIKERKPKLLI---PPESAGSSSSVTVIKGGVLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A ++++ GNM +E ET N G +L+I + AD G Y+C +
Sbjct: 280 IAEGLPTPHLSWVKV-----TGNMPKDEPETENF---GKMLKIDQVTAADEGTYQCTASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G+ + V VE PP
Sbjct: 332 PMGRARHEFHVRVEEPP 348
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 15/176 (8%)
Query: 103 EGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCT 160
+GG + + C E P P W K GN+ + F G +L I V+ D G Y CT
Sbjct: 271 KGGVLLLECIAEGLPTPHLSWVKVTGNMPKDEPETENF--GKMLKIDQVTAADEGTYQCT 328
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A+N G + + V P + ++ P + NL L C A + + W NG
Sbjct: 329 ASNPMGRARHEFHVRVEEPPQWLKK-PEGGVYSVGANLVLLCEAIGNP--EPSIQWKLNG 385
Query: 221 VRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ I G + T I+ +TN D+ ++C + G I V V
Sbjct: 386 MPIDGRTFRGRVSTREIS-------LTNLQLQDSAVFQCEATNKHGTILASANVNV 434
>gi|449274452|gb|EMC83604.1| Neural cell adhesion molecule L1-like protein, partial [Columba
livia]
Length = 1211
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 224/481 (46%), Gaps = 36/481 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L CEA G P+ T W NG ++S T + R ++ LT L +D A+YQ
Sbjct: 350 NLVLLCEAIGNPEPTIQWKLNGAPIDSRTF----RGRISAREISLTNLQL---QDSAVYQ 402
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWK 124
C A N+ T ++A + VL + P + E YA G + + C A+P W
Sbjct: 403 CEASNKHGTILATANVNVLNIAPLILTS--DGENYATVVGYSAFLHCEIFASPAADIRWT 460
Query: 125 KDGNIIGS-GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KD +I R ++ +NG L I ++D+G Y+C A N G L +
Sbjct: 461 KDESIEPLLTSRYELNKNGTLEIKETKKEDTGSYACWAANSVGKRAITANLDIRDATKLV 520
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDGG 241
P + ++ L+C + + L ++ W +G + +N E I +D
Sbjct: 521 -VTPKNPRVLKSHSVLLKCQSEYDSHLKHSFRLSWRKDG---DELPVNSTEDGRIILDKD 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I++ + D G Y CV ++++ ++ ++ ++V P P +Q+ E S + W
Sbjct: 577 TLFISSVTLKDQGVYTCVARTSLDSVTAESQLVVLDVPDPPEDLQLSENQNRSVRLSWKA 636
Query: 302 GATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
GA++ PI I W W +E+ R G + ++ L P+ Y+F
Sbjct: 637 GASHNSPINELIIEFEEDRWEPGRW---------QELTRAPG-NDTTVLLSLAPYMNYQF 686
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V++ N +G +PS PS +Y TP P + P I + ++ + WEPL ++N P
Sbjct: 687 RVVSVNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEASEPDEMVMKWEPLKPMERNGPG 746
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR++ + ++ ET+K++ + + P+ + YE+KVQA+N++G GPE
Sbjct: 747 LEYKVSWRQRGVEADWNEETVKKH---SLTLRNTPT---FVPYEIKVQAVNNLGSGPEPN 800
Query: 479 V 479
V
Sbjct: 801 V 801
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 131/343 (38%), Gaps = 61/343 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG---ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D T CEA G P T++W ++G +LL+ + + F+ N I
Sbjct: 54 DFTIKCEARGNPHPTFNWTKDGKPFDLLSDPRIVASNNSGTFVLQNRGIITSFQ-----G 108
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKP 119
Y+C A N L T S ++ P F K PL+ E G +V + CNP P
Sbjct: 109 KYRCFASNMLGTTMSEEIELIVPSVPKFPKEKIEPLDVE----HGDSVILHCNPPKGIPP 164
Query: 120 KFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------TNVHGM--- 167
++ D I R + G+L + V +DS Y C A T V M
Sbjct: 165 LHIYWMNIDLQHIPQDERVSMSLKGDLYFANVEENDSRSDYCCFAAFPTLRTIVQKMPMT 224
Query: 168 -DESKGRLIVLHGPSYYEQLPPK-------ITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
S+ I P +PP+ +T+ L L C A E L W
Sbjct: 225 LKVSRSNFIKERKPKLL--IPPESAGSSSSVTVIKGGVLLLECIA--EGLPTPHLSWVK- 279
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
GN+ +E ET N G +L+I A+ AD G Y+C + +G+ + V VE PP
Sbjct: 280 --LTGNLPRDEPETENF---GKILKIEQATAADEGTYQCTASNPMGRAKHEFHVHVEEPP 334
Query: 280 GL----PGGVQVV---------EVHKTSATIQWTDGATNGRPI 309
GGV + + TIQW NG PI
Sbjct: 335 QWIKEPEGGVYSIGTNLVLLCEAIGNPEPTIQW---KLNGAPI 374
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 186/506 (36%), Gaps = 75/506 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
CE F P W ++ E++ RY + N L I+ E D Y C A
Sbjct: 447 CEIFASPAADIRWTKD------ESIEPLLTSRYELNKNGTLEIKETKKE-DTGSYACWAA 499
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK---- 120
N + R +A L + L + P R L+S + V + C E K
Sbjct: 500 NSVGKRAITANLDIRDATKLVVTPK-NPRVLKSHS-------VLLKCQSEYDSHLKHSFR 551
Query: 121 FVWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W+KDG+ + + R I + L IS V+ D G+Y+C A ++ +L+VL
Sbjct: 552 LSWRKDGDELPVNSTEDGRIILDKDTLFISSVTLKDQGVYTCVARTSLDSVTAESQLVVL 611
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGN-MDLNEL 231
P P + ++ ++N +R S +H + ++ + + G +L
Sbjct: 612 DVP----DPPEDLQLSENQNRSVRLSWKAGASHNSPINELIIEFEEDRWEPGRWQELTRA 667
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 291
+ + L N F V +S K S + P P ++V
Sbjct: 668 PGNDTTVLLSLAPYMNYQFRVVS-VNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEASE 726
Query: 292 KTSATIQWTDGATNGR--PITHYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTGRKE 344
++W R P YK+ R +WN V +H + T R
Sbjct: 727 PDEMVMKWEPLKPMERNGPGLEYKVSWRQRGVEADWNEE--TVKKHSL-------TLRNT 777
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ VP YE KV A N LG G + + Y+ D P APS + +
Sbjct: 778 PT----FVP---YEIKVQAVNNLGSGPEPNVTIGYSG-EDIPDAAPSDVSVDIVNSTLVK 829
Query: 405 ISWEPLPREKQNAPNIYYKIFW--------RKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ W +P+++ YK+ W K++ E Q T N G+ IP
Sbjct: 830 VFWFGIPKDRVRGHLRGYKVNWWKTKSMLDGKRHHPEKQFLTFVGDRNYGM----IPGLE 885
Query: 457 YYTEYEVKVQAINDVGPGPESEVVTI 482
++E+ + V A N G GPES +
Sbjct: 886 AFSEFRLTVLAYNSKGDGPESSPIVF 911
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 80/216 (37%), Gaps = 27/216 (12%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D YQC A N + + V P + K P E Y+ G N+ + C P+P
Sbjct: 307 DEGTYQCTASNPMGRAKHEFHVHVEE-PPQWIKEP-EGGVYS-IGTNLVLLCEAIGNPEP 363
Query: 120 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
WK +G I S R + ++ + DS +Y C A+N HG + + VL+
Sbjct: 364 TIQWKLNGAPIDSRTFRGRISAREISLTNLQLQDSAVYQCEASNKHGTILATANVNVLN- 422
Query: 180 PSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ P I + N L C D+ WT + + L
Sbjct: 423 ------IAPLILTSDGENYATVVGYSAFLHCEIFASPAADIR--WTK------DESIEPL 468
Query: 232 ETPNINID-GGLLEITNASFADAGEYECVVKSTVGK 266
T ++ G LEI D G Y C ++VGK
Sbjct: 469 LTSRYELNKNGTLEIKETKKEDTGSYACWAANSVGK 504
>gi|196016263|ref|XP_002117985.1| hypothetical protein TRIADDRAFT_62006 [Trichoplax adhaerens]
gi|190579458|gb|EDV19553.1| hypothetical protein TRIADDRAFT_62006 [Trichoplax adhaerens]
Length = 1318
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 218/489 (44%), Gaps = 40/489 (8%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPA 62
++D W C A G V Y W+ NG+ + T +Y + N LTIR L D
Sbjct: 374 ESDFNWPCVASG-STVGYRWYMNGQRIVQST-------KYILNANGSLTIRSL-VRGDTK 424
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+Y C A N+ SS L V P F + P ++T G + TI C P+P
Sbjct: 425 VYSCLAYNEHSNIVSSGWLNVTVAAPKFVEVPY-TQTTLFRGQSSTIRCTVTGGPRPDMT 483
Query: 123 WKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+ KDG + + + NGNL+I V D+G Y CTATN +G ++ G +VL
Sbjct: 484 YTKDGGFVDKLLYNKYTVKPNGNLVIHNVVDSDAGEYKCTATNRYGTTDATGTAVVLSAT 543
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + L I +N + C+ + L+V W G I T N
Sbjct: 544 VFTKPLAATF-IRRPKNFTISCTVQKADSLNVVLYWQREGKNI----TTSRATVRTNGLT 598
Query: 241 GLLEITNASFADAGEYECVVKSTVGKIS-----TKTTVIVEGPPGLPGGVQVVEVHKTSA 295
L N++ +D+G++ CV + V + + T+ V P P E+ ++S
Sbjct: 599 STLSYYNSTLSDSGQFACVAATNVPYVGYVANPSLATLTVNDVPNPPFNFTYSELTRSSV 658
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
W G N P+ + I R N ++W ++E I T R+ A L P++
Sbjct: 659 LFSWLPGNPNNSPLLRFAIHYRVNNVNSW-RIAEDYIPVSA---TFRRIA-----LSPFN 709
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPRE 413
TY F+++A N +G + S+ ++T D PY AP R+ G G G L I + PL RE
Sbjct: 710 TYRFRIVAVNAVGASQDST-YQIFSTLGDVPYNAPGEFRVSGVTGNSGALDIRFVPLSRE 768
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+QN I Y++ +R++ T QS + G G R+ T YE+++Q N+ G
Sbjct: 769 EQNDAGINYRLSFRQQGPT--QSWSNVNTGTTG--TYRLAGLAQNTRYELRLQPFNNAGF 824
Query: 474 G-PESEVVT 481
G +E++T
Sbjct: 825 GRAATEIIT 833
>gi|47229254|emb|CAG04006.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1238
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 232/505 (45%), Gaps = 56/505 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D C + G P T +WF NGE ++ TL Q + + +R + + A+
Sbjct: 353 EEDGRLVCRSDGAPRPTVTWFINGEPIDPSTL----QPNVEVSGETVVLRTVTTLNN-AV 407
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET---YAGEGGNVTIFCNPEAAPKPK 120
YQC A N ++A + VL P R L S EG + C +P P+
Sbjct: 408 YQCNASNPYGYLLANAFVNVLHATP----RILGSRNEYLKVIEGSRAFLDCRYFGSPVPE 463
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K G G R + NG L I + D G Y C +NV G DE++ R I + P
Sbjct: 464 LRWSKYGQGSLEGNRFRTHSNGTLEIKNIQVVDQGAYLCVVSNVAGRDENQVR-IEVKEP 522
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P + + +++ C+ T+ V W G + + I++D
Sbjct: 523 TLIVTRPTDMKVIRGADVRFECAVKTDATTPVTTTWM-KGTKPVTLGWR------ISMDE 575
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I+N + AD G Y C+VKS + + S ++V P P +++ + H+ S + W
Sbjct: 576 SNLVISNINTADGGNYTCLVKSELEQKSASARLMVMDRPDPPTDLELSDPHERSVRLSWV 635
Query: 301 DGATNGRPITHYKIIART------NWNSTW-FNVSEHVIG-----------KEVDRYTGR 342
G ++ PIT + ++ ++ T+ V+++++ K + Y G
Sbjct: 636 PGNSHHNPITGERCPGKSVSSIFPTFSITYTCAVADNLVQYDDDDWLPGKWKNLSLYPGN 695
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+ I + L+P++ YEF+VIA NE+G PS PS ++ + P P + G G +
Sbjct: 696 LNSVILH-LLPFTYYEFRVIAINEIGMSRPSRPSSRFQSSGAPPDVIPKNLKGVGTWRNN 754
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY----- 457
+ ISWEPL + N P++ Y ++W++K+ E E+ N A R S++Y
Sbjct: 755 MEISWEPLAYKDWNGPHLKYLVWWKRKDSRE-------EWKN---ATTRW-SKYYIYGAD 803
Query: 458 -YTEYEVKVQAINDVGPGPESEVVT 481
+T Y++KVQA+ND G GPES +VT
Sbjct: 804 TFTPYDLKVQAVNDFGMGPESPIVT 828
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 34/278 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP +W ++GE L + P++ ++ + ++ I + E D Y C A N
Sbjct: 269 CIAAGVPTPHITWRKDGEDLVVRS-PVKAKNF----NKMIQIPRASFE-DAGEYVCTATN 322
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+L + ++V P + ++P + E G + C + AP+P W +G I
Sbjct: 323 KLDYIQHTITVQV-KAAPFWLEKPADLVLAPEEDGR--LVCRSDGAPRPTVTWFINGEPI 379
Query: 131 GSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ E +++ V+ ++ +Y C A+N +G + + VLH P
Sbjct: 380 DPSTLQPNVEVSGETVVLRTVTTLNNAVYQCNASNPYGYLLANAFVNVLHA-------TP 432
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPNINIDG 240
+I RN L+ + LD Y W+ G G+++ N T +
Sbjct: 433 RIL--GSRNEYLKVIEGSRAFLDCRYFGSPVPELRWSKYGQ--GSLEGNRFRTHS----N 484
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI N D G Y CVV + G+ + + V+ P
Sbjct: 485 GTLEIKNIQVVDQGAYLCVVSNVAGRDENQVRIEVKEP 522
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 11/177 (6%)
Query: 111 CNPEAAPKPKFVWKKDGN--IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 168
C P P W+KDG ++ S + K F N + I S +D+G Y CTATN
Sbjct: 269 CIAAGVPTPHITWRKDGEDLVVRSPVKAKNF-NKMIQIPRASFEDAGEYVCTATNKLDYI 327
Query: 169 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ + V P + E+ P + +A + +L C + V W NG I L
Sbjct: 328 QHTITVQVKAAPFWLEK-PADLVLAPEEDGRLVCRSDGAPRPTVT--WFINGEPIDPSTL 384
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPGG 284
PN+ + G + + + + Y+C + G + V ++ P + G
Sbjct: 385 Q----PNVEVSGETVVLRTVTTLNNAVYQCNASNPYGYLLANAFVNVLHATPRILGS 437
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + + CEA G P +SW RNG N P R+ ++ NPE+
Sbjct: 15 VDAKDAMVIECEAKGNPHPIFSWRRNGRYYNVARDPQASMRRHSGTLDIYARN--NPEQY 72
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 96
A YQC A N + YS+ L P + + +E
Sbjct: 73 EAEYQCVASNMYGSAYSNKIRLRLYRAPVWPREIIE 108
>gi|297670836|ref|XP_002813560.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
L1-like protein-like [Pongo abelii]
Length = 1225
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTE--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GR+ I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRQYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDSHLKNSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 596 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ +Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVSYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 819
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 191/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEVKPLEGRQYHIYENGTLQINRTT-EEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKNSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 688
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F + ++ + + VG+ ++ + E PP P ++V
Sbjct: 689 ILPL--APFV-SYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 745
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 746 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 791 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 846
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 847 STIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 906
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 907 TVLAYNSKGAGPESE 921
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKEETLLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 14/160 (8%)
Query: 77 SSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIF--------CNPEAAPKPKFVWKK 125
SS+ + + S K+R L T +G ++TI C E P P+ W K
Sbjct: 233 SSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKEETLLLECFAEGLPTPQVDWNK 292
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G + G K L I VS D G Y CTA+N G +IV P + ++
Sbjct: 293 IGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK 352
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
P + N L C A E + W NG I N
Sbjct: 353 -PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPIDN 389
>gi|410951587|ref|XP_003982476.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
L1-like protein-like [Felis catus]
Length = 1208
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 216/481 (44%), Gaps = 37/481 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG ++ + + ++ L P A+YQC A N
Sbjct: 351 CEAEGEPEPTLKWRVNGSPIDKNPFAGD-----VVSPTEISFTNLQPNHT-AVYQCEASN 404
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + + C A+P+ W+K
Sbjct: 405 VHGTILANANIDVVDVRPLIQTE--DEENYATVVGYSAFLHCEYFASPEAIVSWQKVDEA 462
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I ENG L I+ + DD+G YSC N G L + + Q+ P
Sbjct: 463 KPLEGRRYHIHENGTLQINKTTEDDAGSYSCWVENAKGKTAVTANLDIRNATKL--QVSP 520
Query: 189 K-ITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
K + L+L C + + L + W+ NG ++N E I IDG L I
Sbjct: 521 KNPRVPKLHTLELHCESKCDPYLKHSLKLSWSKNG---EGFEINATEDGRIIIDGPNLTI 577
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
+N + D G Y C ++ + ++ T V + P P + + E S + W G +
Sbjct: 578 SNVTSEDQGIYSCSAQTALDSVADVTHVTILDVPDPPENLHLSERQNRSVRLTWDAGNDH 637
Query: 306 GRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
I+ Y + N W +E+ R G++ ++ + L P+ Y+F+VIA
Sbjct: 638 NSRISEYIVEFEGNKEEPGRW---------EELTRVQGKETTALLS-LAPYVRYQFRVIA 687
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y+
Sbjct: 688 VNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYR 747
Query: 424 IFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ W+ + E + ET+ + +R+ + Y Y+V+VQA+N +G GPE + V +
Sbjct: 748 VTWKPQGAPVEXEEETVTNH------TLRVMTPTVYAPYDVQVQAVNHLGSGPEPQSVIL 801
Query: 483 W 483
+
Sbjct: 802 Y 802
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 186/496 (37%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 444 CEYFASPEAIVSWQKV-----DEAKPLEGR-RYHIHENGTLQINKTTEDDAGSYSCWVEN 497
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+A L + L + P + P L + E C+P K W
Sbjct: 498 AKGKTAVTANLDIRNATKLQVSPKNPRVPKLHTLELHCESK-----CDPYLKHSLKLSWS 552
Query: 125 KDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K+G I + R I + NL IS V+ +D GIYSC+A + +L P
Sbjct: 553 KNGEGFEINATEDGRIIIDGPNLTISNVTSEDQGIYSCSAQTALDSVADVTHVTILDVPD 612
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDG 240
E L ++ +R+++L A + ++ YI G + EL
Sbjct: 613 PPENL--HLSERQNRSVRLTWDAGNDHNSRISEYIVEFEGNKEEPGRWEELTRVQGKETT 670
Query: 241 GLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSA 295
LL + A + ++ + + VG+ ++ + E PP P ++V
Sbjct: 671 ALLSL--APYVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEM 727
Query: 296 TIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVL 351
I+W P Y++ TW V +E V +T R V+
Sbjct: 728 IIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEXEEETVTNHTLR-------VM 772
Query: 352 VP--WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSIS 406
P ++ Y+ +V A N LG G P PQ + D P AP G + +S
Sbjct: 773 TPTVYAPYDVQVQAVNHLGSG----PEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVS 828
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYE 462
W +P+++ + Y+I W K KE + + R +PS ++E+
Sbjct: 829 WSTIPKDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFH 888
Query: 463 VKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 889 LTVLAYNSKGAGPESE 904
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 111/297 (37%), Gaps = 49/297 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQCR 67
CEA G P+ T+ W ++ +T L D R + +N T + N Y+C
Sbjct: 55 CEAKGNPEPTFMWTKD-----DKTFDLSDS-RIIVSNNSGTFKIPNEGHISHFQGKYRCF 108
Query: 68 AKNQLKTRYSSAQLRVLTLK----PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ K P K PLE E EG + + CNP P ++
Sbjct: 109 ASNKLGVAMSEEIEFIVPSKCSKIPKRKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 164
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSC------------------TAT 162
+ + I R + + G+L + V DS Y C T
Sbjct: 165 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 224
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
+ + + + K RL++ P +TI L L C A E L W G
Sbjct: 225 SSNSIKQRKPRLLL---PPSESGSASSVTILKGDTLLLECFA--EGLPTPQVDWNKIG-- 277
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ N G L+I N S+ D G Y C + +G S V+VE PP
Sbjct: 278 -GDLPKGRETKENY---GKTLKIENVSYRDRGNYRCTANNFLGSTSHDFHVVVEEPP 330
>gi|312380248|gb|EFR26301.1| hypothetical protein AND_07751 [Anopheles darlingi]
Length = 1117
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 205/464 (44%), Gaps = 28/464 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P W NG+ ++ R + N + L + D Y C A N
Sbjct: 296 CEAAGDPSPNIIWIHNGKPIDQS----PRNPRRVVSTNRIYFNKLE-KGDTGNYGCNATN 350
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
L Y L VL L P P + + NVT+ C APKP+ W ++ +
Sbjct: 351 SLGYVYKDVFLNVLALAPEITDPP--KREFTVDQRNVTMTCRVFGAPKPQVKWVRNQREL 408
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+GGR + +G+L I V DD+G Y+C A+N G ++ G LIV + P
Sbjct: 409 -TGGRYQTLSSGDLFIRDVKFDDAGEYTCHASNKLGERQASGELIVKEH-TVINDPPQDY 466
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
+ A RC+A + L++ W NG I D + + I L I+
Sbjct: 467 EVEAGTTATFRCNAVADSSLELTIEWLTNGEVI---DFDS-QPRFIRTSDNSLMISKTIE 522
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
D G Y C+ K+ + ++ T+ V P P +V+ K A I+WT N PI
Sbjct: 523 LDTGIYSCLAKTELDEVMANATLTVMDRPNPPTLERVICYGKV-AKIEWTSNGDNRSPIL 581
Query: 311 HYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 369
+Y I T++ TW ++E V G ++ PW+ Y ++VIA N++G
Sbjct: 582 NYIIEYNTSFTPDTWTLLTEDVPGTDLSWVVN---------TTPWNNYTYRVIAVNKVGR 632
Query: 370 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429
PS S +T PY+ P + G + +L I W P+ + NAP +Y+++WR+
Sbjct: 633 SLPSGHSEVCSTETSVPYKCPDGVEAEGTEPNNLVIKWNPMAQVDHNAPGFHYRVYWRRN 692
Query: 430 NDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ + S ++++ V +P+ +TEY +KV A+ND G
Sbjct: 693 IPSGTWSSVDVRDWRQSSYTVEGLPT---FTEYHIKVIAVNDRG 733
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 193/516 (37%), Gaps = 86/516 (16%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+Q ++T TC FG P W RN L FI+D +++ D
Sbjct: 381 DQRNVTMTCRVFGAPKPQVKWVRNQRELTGGRYQTLSSGDLFIRD----VKF----DDAG 432
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N+L R +S +L ++ P + E AG T CN A +
Sbjct: 433 EYTCHASNKLGERQASGEL-IVKEHTVINDPPQDYEVEAGT--TATFRCNAVADSSLELT 489
Query: 123 --WKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W +G +I + + + +L+IS D+GIYSC A + L V+
Sbjct: 490 IEWLTNGEVIDFDSQPRFIRTSDNSLMISKTIELDTGIYSCLAKTELDEVMANATLTVMD 549
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR---IGN--MDLNELET 233
P+ PP + ++ C ++ WT NG I N ++ N T
Sbjct: 550 RPN-----PPTLE-------RVICYGKVAKIE-----WTSNGDNRSPILNYIIEYNTSFT 592
Query: 234 PNI------NIDGGLLE-ITNASFADAGEYECVVKSTVGK---------ISTKTTVIVEG 277
P+ ++ G L + N + + Y + + VG+ ST+T+V
Sbjct: 593 PDTWTLLTEDVPGTDLSWVVNTTPWNNYTYRVIAVNKVGRSLPSGHSEVCSTETSV---- 648
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGAT--NGRPITHYKIIARTNWNS-TWFNVSEHVIGK 334
P P GV+ + I+W A + P HY++ R N S TW
Sbjct: 649 PYKCPDGVEAEGTEPNNLVIKWNPMAQVDHNAPGFHYRVYWRRNIPSGTW---------S 699
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPS-- 391
VD R+ + L ++ Y KVIA N+ G S P +Y + DKP AP+
Sbjct: 700 SVDVRDWRQSSYTVEGLPTFTEYHIKVIAVNDRGEAN-SGPWEKYVYSGEDKPLDAPTNF 758
Query: 392 ---RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETL-KEYGNVG 446
++ G I +SW P+ E YKI W + + E E L
Sbjct: 759 TLIQVTGPSTAI----VSWNPVTPESLRGHFKGYKIQTWTEADGEENLREVLITADAKQA 814
Query: 447 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ V +P Y ++ A N GP S ++
Sbjct: 815 LITVLVPDSTNY----ARILAYNGRYNGPASTTISF 846
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 18/222 (8%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGN 106
E + Y C A + ++ Y +L +K P ++ A +G
Sbjct: 140 ESNDFFYACAASSMFRSEYKIGNRVLLQVKQTGISAAQNRHPPTRQYVSRKNEVALKGKQ 199
Query: 107 VTIFCNPEAAPKPKFVWKKDGN-IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 165
V +FC P P+ VW K+G II + ++ +L I VS +D+G Y+C +N
Sbjct: 200 VELFCIYGGTPLPETVWTKNGRAIIWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGV 259
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
G +S + ++ Y+ P + A + RC A + ++ IW HNG I
Sbjct: 260 GNADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFRCEAAGDPSPNI--IWIHNGKPIDQ 317
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
N P + + D G Y C +++G +
Sbjct: 318 SPRN----PRRVVSTNRIYFNKLEKGDTGNYGCNATNSLGYV 355
>gi|350644557|emb|CCD60720.1| septate junction protein [Schistosoma mansoni]
Length = 1161
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 222/504 (44%), Gaps = 42/504 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNS--ETLPLEDQDRYFIQDNVLTIRYLNP- 57
+D +D+ TCEA G+P+ T+ W+RN ++ T L I+D L+ +L
Sbjct: 442 VDINSDVFLTCEASGIPNPTHEWYRNDITVSQLIATGKLNPTQYTIIRDGSLSHSFLFCY 501
Query: 58 -ERDPAMYQCRAK-NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 115
+ + C N L + SSA++RVL L P+F+K P+ G + C PE
Sbjct: 502 FRLNFQILVCLLVWNSLGSEASSAEVRVLELAPTFRKHPVMPNE-GMVGSTAVMECQPEG 560
Query: 116 APKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR------DDSGIYSCTATNVHGMDE 169
AP W DG ++ + NG++ + P R D + C N M
Sbjct: 561 APAMTVEWLHDGTVLTTSDTLMNVSNGDVDLLPGERLVDLEYADDIVLLCD--NAQAMQS 618
Query: 170 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ +L + Y P +C ++ D + T + R +L
Sbjct: 619 ALNQL-AISVRRYGMCFAPS-----------KCKVLLQDWQDSHPVLTLDDAR--RYELA 664
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
+L P N G L+I N F ++G Y C ++ + S+ + + GPPG GGV VV+
Sbjct: 665 QLYRPYGNY-FGTLKIVNVQFENSGNYTCAAETPLNSQSSSGVIRIAGPPGPCGGV-VVD 722
Query: 290 VHK--TSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVI--GKEVDRYTGRK 343
H + W G ++ I +++I A ++ + W ++ +V ++ + + R+
Sbjct: 723 PHVGVDRVNVSWAVGTSHLFQILYFQIEANAMYDPPNQWMIMASNVSISSTKLLKPSDRR 782
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ N L Y +V AGN LG GEPS PS + T KP P + GGGGK G L
Sbjct: 783 MTVVRN-LAANMAYRIRVRAGNALGLGEPSPPSLSFTTLPTKPTLIPQNVTGGGGKHGTL 841
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-----SETLKEYGNVGIAVVRIPSEFYY 458
W PL R +N PN +Y+ + K + E+ + + + G + + +Y
Sbjct: 842 VFKWIPLKRVNENGPNFHYRAHIKAKENAEYSIHDLWTAKMSDDGKFMQYTLTLGDNLFY 901
Query: 459 TEYEVKVQAINDVGPGPESEVVTI 482
Y+V VQA+N G GP SE VT+
Sbjct: 902 KPYDVMVQAVNSEGAGPLSEPVTV 925
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 115/303 (37%), Gaps = 48/303 (15%)
Query: 11 CEAFGVPDVTYSWFR-NGELLNSET-------------LPLEDQDRYFIQDNVLTIRYLN 56
CEA G P TY W+ + E+ + T E R I L I +
Sbjct: 129 CEANGNPQPTYKWYYVSTEMRTNSTGDTITILHRTLIDAAAEPSGRISISAGSLVIHNPD 188
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
D M+QC AKN + S + + K+P +E + T+ C P A
Sbjct: 189 TSTDSQMFQCEAKNIYGSILSRTARIIFGQLETAPKQP-RNERIVMSHQSETLPCEPPAH 247
Query: 117 PKPKFV-----WKKDGNI--IGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTAT---N 163
P + K+G + + RR +F G + S V+ DSG+Y C T +
Sbjct: 248 SPPDSLLYTVYMNKNGELEPVLPEYRRNLFISQAKGLIGFSEVTVVDSGVYVCMITMQFD 307
Query: 164 VHGMDESKGR----LIVLHG------PSYYEQLPPKITIAAHRN--LQLRCSAHTEELLD 211
H M +S V + P Y+ P R ++L C A LD
Sbjct: 308 GHRMYDSPKLPDMPFTVRYSNEPRQDPRIYDDFPAVWPTNPQRGQLVRLECFAAGYSQLD 367
Query: 212 -VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ Y W +D L T ++ ++E+ N D GEYEC V+ ++GK++
Sbjct: 368 GLKYSWRR-------LDGAPLRTDSLKDYDRVIELPNVQPEDQGEYECNVEDSLGKMARP 420
Query: 271 TTV 273
T+
Sbjct: 421 KTL 423
>gi|427797293|gb|JAA64098.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
pulchellus]
Length = 1345
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/534 (24%), Positives = 225/534 (42%), Gaps = 92/534 (17%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERD 60
+ +++ C A G+P+ WF NG +P+E + R ++ +LTI L +RD
Sbjct: 325 EESVSFECAATGIPEPKLQWFVNG-------VPVEKAEPNPRRKVEGPLLTIEALT-KRD 376
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
A+YQC A N + L VL L P+ + P E T A VT+ C AP+P+
Sbjct: 377 TAVYQCNASNPHGYAFRDFYLNVLALPPTITEAP-EQLTLAVVTSRVTLRCRVFGAPRPE 435
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRL 174
W K+ + +GGR ++ ++G+L I + D G Y+C A+N G E KG+
Sbjct: 436 VKWMKEAQEL-TGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLEVKGKT 494
Query: 175 IVLHGPSYYE-------------------------------------------------- 184
++ P YE
Sbjct: 495 LITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADARMXGSLEVKGKT 554
Query: 185 ---QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
Q P +AA ++ RC+A + L++ W NG + E + +
Sbjct: 555 LITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDP----EADARMVQAGDN 610
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L IT D+G Y CV ++ + + T+ V+ P P V++ + A ++W
Sbjct: 611 SLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVKI-DCDGLMALVEWKP 669
Query: 302 GATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
PI Y I T+++ TW + ++ + + + PW+ Y F+
Sbjct: 670 TGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT---------KFKVSMSPWANYTFR 720
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N++G PS S + TP D P++ P R+ G G + +L I+W P+P + NAP
Sbjct: 721 VVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGF 780
Query: 421 YYKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+YK+ W++ + D + S ++++ P+ + Y +KV+A N G
Sbjct: 781 FYKVLWKRDDIPDATWNSRIIEDWKQNRHVEYGQPT---FKPYRIKVEAHNRRG 831
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 113/296 (38%), Gaps = 45/296 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
CEA G P+ TY W +N N E + R Q T+ + P+ D +YQCRA
Sbjct: 34 CEAQGHPEPTYEWTKN----NKEFDYVSYDKRISQQPRRGTLVFTKPDDVDEGLYQCRAT 89
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAA-PKPKFVWKKD 126
N T S+A V K E+ E Y EG +++ CNP P+P W
Sbjct: 90 NLHGTSVSNA---VFLRKAELNNFAEETTKEVYVVEGDPLSLDCNPPTGYPRPNIFWLIQ 146
Query: 127 GNIIGSGGRRKIFEN-------GNLLISPVSRDDS---GIYSCTATNVHGMDESKGRLIV 176
SG R + + G+L S V D+ +Y+C+AT+V + G I
Sbjct: 147 ---YSSGALRNVNSSRITADPEGDLHFSRVELGDALSDAVYTCSATSVFRREYKIGNKIQ 203
Query: 177 L------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L H P PP + L+L C L ++ W+ G
Sbjct: 204 LKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYCIYGGTPLPQIS--WSKRG---A 258
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT-VIVEGPP 279
N N G LEI + SF D G YEC + VG T V VE P
Sbjct: 259 NPTSRRFTYSNY---GKTLEIRSVSFEDEGTYECQANNGVGVAQTHAMHVKVEAAP 311
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 20/209 (9%)
Query: 62 AMYQCRAKNQLKTRY---SSAQLRVLTLKPSFKKRPLESETY-------AGEGGNVTIFC 111
A+Y C A + + Y + QL+V + K + Y A G + ++C
Sbjct: 182 AVYTCSATSVFRREYKIGNKIQLKVEPTSSAGKAEHAPVKQYLSPPNLVALRGHELKLYC 241
Query: 112 NPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDE 169
P P+ W K G RR + N L I VS +D G Y C A N G+ +
Sbjct: 242 IYGGTPLPQISWSKRG--ANPTSRRFTYSNYGKTLEIRSVSFEDEGTYECQANNGVGVAQ 299
Query: 170 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ + + Y+ ++P A ++ C+A + + W NGV + + N
Sbjct: 300 THAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATG--IPEPKLQWFVNGVPVEKAEPN 357
Query: 230 ELETPNINIDGGLLEITNASFADAGEYEC 258
P ++G LL I + D Y+C
Sbjct: 358 ----PRRKVEGPLLTIEALTKRDTAVYQC 382
>gi|390339770|ref|XP_001198248.2| PREDICTED: contactin-2-like [Strongylocentrotus purpuratus]
Length = 704
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 156/310 (50%), Gaps = 16/310 (5%)
Query: 21 YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRYSSA 79
Y+W+RNGE+L + +DR+ ++N+ T+ + + D AMYQC A N YS+A
Sbjct: 350 YTWYRNGEILTA-------RDRHQFRNNLETLIISDLKTTDTAMYQCFASNNHGMIYSAA 402
Query: 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 139
QL V P F P+E+E A VT C+ +AAP P W+ DG I + R +
Sbjct: 403 QLSVRAFPPMFLS-PMETEQPAPITATVTALCDVDAAPAPTVTWQHDGQPITNSARYNLT 461
Query: 140 ENG-NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 198
+ NL+I V D G Y CTATN +G +G L + + P + ++
Sbjct: 462 ADPPNLVIIGVRVSDGGTYQCTATNSNGTVTGEGSLDI-KDSTVITGHPDNTLVEVGQST 520
Query: 199 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEYE 257
LRC A +E L + Y+W HNGV I DL+E++ ++ D G LEI +A D GEY
Sbjct: 521 TLRCKAAHDESLTLTYLWKHNGVAI---DLSEIDRYRMSERDNGNLEIVSAQSRDGGEYT 577
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 317
CV + + T+ + PPG P G+ VEV +A + W G N PIT + I +
Sbjct: 578 CVALTVADSDRSSATLDIAAPPGPPSGLS-VEVENLAANLSWVPGTDNNSPITSFTIEGQ 636
Query: 318 TNWNSTWFNV 327
T+ + W +
Sbjct: 637 TDHSDEWVEL 646
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 142/391 (36%), Gaps = 58/391 (14%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--D 60
N +++ C A G +TY+W ++G L+ L R I LTI +PER D
Sbjct: 39 NVVSVSFHCRATGDEPITYTWTKDGAPLS-----LATNARLVITPGQLTIT--SPERTVD 91
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAA-PK 118
Y C A N++ + S V F +++ AG+GG VT CNP P
Sbjct: 92 GGEYVCMASNRVGSVRSLPAELVFAYVDLFDPSATSTQSLTAGQGGCVT--CNPPPHYPG 149
Query: 119 PKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSC-TATNV---HGMDESKGR 173
W + +++ S R ++ +G L D+G Y C +NV G+
Sbjct: 150 ILVNWFHENSLVDSSDSRIRVMYDGRLCFFYALASDAGAYRCQVKSNVLSEGGVHMRVSP 209
Query: 174 LIVLHGPSYY---------EQLPPKITIAAHRNLQLRCSAH----TEELLDVAYIWTH-- 218
L+ + + Y E P +T A +++ C + T ++ V ++ T
Sbjct: 210 LVTVTVNAGYPSSAIRIVQENRPTDVTTIAGEDVKFECFFYGPQPTGQIPRVQWVRTSPP 269
Query: 219 -NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G+ L E G +L I DAG Y C +
Sbjct: 270 GAGLPTSRAVLEE--------GGEVLSIVGVQLEDAGSYLCYINDVYS------------ 309
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
G G+ V E + + D + + + + A TW+ E + ++
Sbjct: 310 --GASAGLNVAEA--PTWVSEPLDAMKDINTMQEWNVEAEEAAQYTWYRNGEILTARDRH 365
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELG 368
++ E I + L T ++ A N G
Sbjct: 366 QFRNNLETLIISDLKTTDTAMYQCFASNNHG 396
>gi|350591362|ref|XP_003132376.3| PREDICTED: neural cell adhesion molecule L1-like protein [Sus
scrofa]
Length = 1225
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 212/480 (44%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P+ T W NG + E P I ++ + P A+YQC A N
Sbjct: 368 CEAEGEPEPTIKWRVNGSPI--ERNPFSGD---VISPGEISFTNVQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T +SA + V+ ++P + + E YA G + + C A+P+ W+K
Sbjct: 422 VHGTILASANIDVVDVRPLIQT--TDEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIHENGTLQINTTTEEDAGSYSCWVENAKGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ L+L C + L + W+ +G ++N E I IDG L I
Sbjct: 539 NPRVPKSHTLELHCENKCDSYLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIA 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C+ +++ + T V V P P +Q+ E H S + W G +
Sbjct: 596 NVTLEDQGIYSCLAHTSLDSTADMTQVTVLDVPDPPENLQLSERHNRSVRLTWEAGDDHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G KE + L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEEPGRW---------EELARVPG-KETTATLSLAPYVRYQFRVIAM 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKPMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G P+ + V ++
Sbjct: 766 TWKPQGALVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSAPDPQSVVLY 819
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 125/508 (24%), Positives = 199/508 (39%), Gaps = 72/508 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 461 CEFFASPEAIVSWQKV-----EEAKPLEGR-RYHIHENGTLQINTTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P + P +S T N C+ K W K
Sbjct: 515 AKGKTAVTANLDIRNATKLRVSPKNPRVP-KSHTLELHCENK---CDSYLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL I+ V+ +D GIYSC A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTIANVTLEDQGIYSCLAHTSLDSTADMTQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L +++ +R+++L A + +++ YI G + EL + G
Sbjct: 631 PENL--QLSERHNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEEL----ARVPG- 683
Query: 242 LLEITNASFADAG----EYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHK 292
+ T A+ + A ++ + + VG+ ++ + E PP P ++V
Sbjct: 684 --KETTATLSLAPYVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQP 741
Query: 293 TSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASI 347
I+W NG P Y++ TW V +E V +T R
Sbjct: 742 KEMIIKWEPLKPMEQNG-PGLEYRV--------TWKPQGALVEWEEETVTNHTLR----- 787
Query: 348 ENVLVP--WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGD 402
V+ P ++ Y+ +V A N LG S+P PQ + D P AP G
Sbjct: 788 --VMTPAVYAPYDVQVQAINHLG----SAPDPQSVVLYSGEDYPDTAPVIHGVDVINSTL 841
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYY 458
+ ++W +P+E+ + Y++ W K KE + + R +PS +
Sbjct: 842 VKVTWSTIPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNVLRFSGQRNYGMVPSLDAF 901
Query: 459 TEYEVKVQAINDVGPGPESEVVTIWHDP 486
+E+ + V A N G GPESE ++H P
Sbjct: 902 SEFHLTVLAFNSKGAGPESEPY-VFHTP 928
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 111/309 (35%), Gaps = 58/309 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQCR 67
CEA G P+ YSW + + + L D R + +N T R N Y+C
Sbjct: 57 CEAKGNPEPKYSWTK-----DDKHFELSDP-RIIVSNNSGTFRIPNEGHISHFQGKYRCF 110
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
A N+L S ++ P F K PLE E EG ++ + CNP P ++
Sbjct: 111 ASNKLGVAMSEEIEFIVPNVPKFPKEKIDPLEVE----EGDSIVLPCNPPKGLPPLHIYW 166
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA-------------------T 162
+ + I R + + G+L + V DS Y C A +
Sbjct: 167 MNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNS 226
Query: 163 NVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEELL 210
H D S I S ++ LPP + I L L C A E L
Sbjct: 227 LKHANDSSSSTEIGSKANSIKQRKPRLLLPPPESGSRSSVIILKGETLLLECFA--EGLP 284
Query: 211 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 285 TPQVDWNKMG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTANNFLGSATHD 338
Query: 271 TTVIVEGPP 279
VIVE PP
Sbjct: 339 FHVIVEEPP 347
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 60/173 (34%), Gaps = 8/173 (4%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+G + + C E P P+ W K G + G K L I VS D G Y CTA
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAN 329
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G +IV P + ++ P + + L C A E + W NG
Sbjct: 330 NFLGSATHDFHVIVEEPPRWTKK-PQSGVYSTGSSGILLCEAEGEPEPTIK--WRVNGSP 386
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I + I G + TN Y+C + G I + V
Sbjct: 387 IERNPFS-----GDVISPGEISFTNVQPNHTAVYQCEASNVHGTILASANIDV 434
>gi|443700552|gb|ELT99433.1| hypothetical protein CAPTEDRAFT_120325, partial [Capitella teleta]
Length = 1186
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/484 (29%), Positives = 222/484 (45%), Gaps = 32/484 (6%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
+ C+A G P W NG + E LP + R + N +T R L D + QC A
Sbjct: 267 FLCKAGGSPQPEILWSING--IAVENLPRDS--RRIVTQNSITYRNLT-SSDAQVIQCNA 321
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
N+ +++A L VL PSF + P ++ T A ++T+ C AP P+ WK+
Sbjct: 322 TNKHGYIFANAYLNVLAEAPSFIRAP-DAVTKAAVSQDITLICEAFGAPDPEITWKRWRE 380
Query: 126 DGN-------IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
D + + G RK +N +L I VS DD G Y C A+N G ++ G LIV
Sbjct: 381 DDSGQKYLELVPGPPKFRKNQKN-HLTIIGVSSDDQGTYECYASNKFGDVDASGDLIVRE 439
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VAYIWTHNGVRIGNMDLNELETPNI 236
+ +E+ P T+ A ++ +C+A T+EL D + Y W NG I D ++
Sbjct: 440 RTTIHER-PHDATVNASTDVIFKCNATTDELEDHNLKYEWRKNGRLI---DFQREGRLSM 495
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
N++ L IT A D+ EY CV + + S T+ V+ P P V + +A
Sbjct: 496 NMNDHSLIITGAQVEDSAEYTCVAGNGLDNDSISATLKVKDVPDPPTDVNMRSCGSNTAE 555
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
I WT G+ N PI+ Y + +N+++ E+ G VD T + S + L PW+
Sbjct: 556 ITWTPGSDNNVPISEYIVF----YNTSFDAAGEYTEGARVDAST---QLSAKVKLSPWAE 608
Query: 357 YEFKVIAGNELGYGEPSS-PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y F V A + +G S+ S TP PY P+ + L I WEP+P+ +
Sbjct: 609 YTFHVQAVSAMGKSPRSAFTSSTCITPQKIPYTNPTGVCTESRAPDQLVIVWEPMPQMEH 668
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N Y + +R+KN Q E E + + + ++ ++EYE+ V+A N G P
Sbjct: 669 NGEGFAYFVSYRRKNYPGAQ-EISTEVTDWRQTELVVGNQEIFSEYEISVRAKNSKGFSP 727
Query: 476 ESEV 479
V
Sbjct: 728 PGTV 731
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNS----ETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+T CEAFG PD +W R E + E +P + R Q N LTI ++ + D
Sbjct: 358 DITLICEAFGAPDPEITWKRWREDDSGQKYLELVPGPPKFRKN-QKNHLTIIGVSSD-DQ 415
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP---- 117
Y+C A N+ +S L ++ + + +RP ++ A +V CN
Sbjct: 416 GTYECYASNKFGDVDASGDL-IVRERTTIHERPHDATVNAST--DVIFKCNATTDELEDH 472
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGN---LLISPVSRDDSGIYSCTATNVHGMD 168
K+ W+K+G +I ++ N N L+I+ +DS Y+C A N G+D
Sbjct: 473 NLKYEWRKNGRLIDFQREGRLSMNMNDHSLIITGAQVEDSAEYTCVAGN--GLD 524
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 92/234 (39%), Gaps = 27/234 (11%)
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLK---PSFKKRPLESETYAG----EGGNVTIFCNPE 114
A Y C KN + + + + PS++ +E + G GG + + C
Sbjct: 118 ATYSCLVKNSVLRSFVIGDDNKIIPQDGTPSYEAPKVEWTSDIGPVVIRGGMLRMKCIFS 177
Query: 115 AAPKPKFVWKKDGNIIGSGGRRKIF-----ENGNLLISPVSRDDSGIYSCTATNVHGMDE 169
P P+ W++ G+ R F N L+I+ V +D G Y C+A+N+ G
Sbjct: 178 GYPTPRVTWRRLPQ--GTEMPRSHFFPEESANKELVINNVQFEDQGTYECSASNMDGGST 235
Query: 170 SKGRLIV-LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-- 226
+ V + ++ + P + + N + C A ++ +W+ NG+ + N+
Sbjct: 236 VSRKFSVRVQSMPFFIEKPMNVHSSEEENAEFLCKAGGSPQPEI--LWSINGIAVENLPR 293
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGP 278
D + T N + N + +DA +C + G I V+ E P
Sbjct: 294 DSRRIVTQN------SITYRNLTSSDAQVIQCNATNKHGYIFANAYLNVLAEAP 341
>gi|291408744|ref|XP_002720662.1| PREDICTED: cell adhesion molecule with homology to L1CAM
[Oryctolagus cuniculus]
Length = 1227
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 219/482 (45%), Gaps = 37/482 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T +W NG L+ + D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTITWRVNGAPLDGHPVA---GDVIFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVWKK-DGN 128
T ++A + V+ ++P + + E+Y A G + + C A+P+ W+K +
Sbjct: 422 VHGTILANANIDVVDVRPLIQTE--DEESYPAVVGYSAFLHCEFFASPEAVVSWQKVEEA 479
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G R + NG L IS V+ DD+G YSC N G L + + + P
Sbjct: 480 SPLEGERYHVHRNGTLEISNVTEDDAGSYSCWVENAVGKTAVTASLDIRNA-TKLSVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ L+L C + ++ L + W +G + N E I IDG L I+
Sbjct: 539 NPRVPRSHVLELHCESSSDSRLKPSLKLSWGKDG---EAFEANGTEDGRITIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C ++ + + T V V P P +Q+ S + W G ++
Sbjct: 596 NVTSEDQGVYSCFAQTALDNAADVTRVTVLDVPDPPENLQLSHRQNRSVQLTWEAGDSHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ + + N W +E+ R G K+ ++ L P+ Y+F+VIA
Sbjct: 656 SNISEFIVEFEGNKEEPGRW---------EELARVPG-KDTTVLLALAPYVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDKNPQNIRVHASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKNDT---EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
W+ + + E++ ET+ + +R+ + Y Y+V+VQA+N +G GPE + VT
Sbjct: 766 TWKPQGASASVEWEEETVTNH------TLRVMTSMVYAPYDVQVQAVNQLGSGPEPQAVT 819
Query: 482 IW 483
++
Sbjct: 820 LY 821
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 189/497 (38%), Gaps = 63/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I + E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEASPLEGERYHVHRNGTLEISNVT-EDDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEA----APKPKF 121
+ +A L + L++ P K P ++ E + C + P K
Sbjct: 515 AVGKTAVTASLDIRNATKLSVSP---KNPRVPRSHVLE-----LHCESSSDSRLKPSLKL 566
Query: 122 VWKKDGNIIGSGGR---RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG + G R + NL IS V+ +D G+YSC A R+ VL
Sbjct: 567 SWGKDGEAFEANGTEDGRITIDGANLTISNVTSEDQGVYSCFAQTALDNAADVTRVTVLD 626
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSA---HTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
P E L +++ +R++QL A H + + + N G + E
Sbjct: 627 VPDPPENL--QLSHRQNRSVQLTWEAGDSHNSNISEFIVEFEGNKEEPGRWE----ELAR 680
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG-GVQVVEVHKT 293
+ + + A + ++ + + VG+ ++ + E PP P Q + VH +
Sbjct: 681 VPGKDTTVLLALAPYVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVHAS 739
Query: 294 S---ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
I+W P Y R W + S + V +T R S+
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEY----RVTWKPQGASASVEWEEETVTNHTLRVMTSM- 794
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSI 405
V P Y+ +V A N+LG G P PQ T D P AP G + +
Sbjct: 795 -VYAP---YDVQVQAVNQLGSG----PEPQAVTLYSGEDYPDTAPVVHGVDVVNSTLVKV 846
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+++ + Y+I W K KE + + R +PS ++E+
Sbjct: 847 TWSTIPKDRVHGHLKGYQISWWKTRSLLDGRVHPKEVKTLRFSGQRNHGMLPSLDAFSEF 906
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 907 HLTVLAYNSKGAGPESE 923
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 110/314 (35%), Gaps = 68/314 (21%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP-----AMYQ 65
CEA G P+ T+ W ++ + N L D R + DN T R P P Y+
Sbjct: 57 CEAKGNPEPTFRWTKDDKPFN-----LSDP-RIIVSDNSGTFRI--PNEGPVSHFQGKYR 108
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFV 122
C A N L S ++ P F K PLE E EG + CNP P +
Sbjct: 109 CFASNALGIAMSEEIEFIVPSVPKFPKEKIAPLEVE----EGDPTVLPCNPPKGLPPLHI 164
Query: 123 WKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------ 161
+ + + I R + + G+L + V DS Y C A
Sbjct: 165 YWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTV 224
Query: 162 ----------------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 205
+ + + + K RL++ P E + + L L C A
Sbjct: 225 SSLKHANDSSLSTEIGSKANSIKQRKPRLLL---PPAEEGAESPVIVLKGDTLLLECFA- 280
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
E L W G G++ N G L+I + S+ D G Y C + +G
Sbjct: 281 -EGLPTPQIEWNKMG---GDLPKGRETKENY---GKTLKIDDVSYRDRGNYRCTASNALG 333
Query: 266 KISTKTTVIVEGPP 279
S V+VE PP
Sbjct: 334 TASHNFHVVVEEPP 347
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P P+ W K G + G K L I VS D G
Sbjct: 263 ESPVIVLKGDTLLLECFAEGLPTPQIEWNKMGGDLPKGRETKENYGKTLKIDDVSYRDRG 322
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 207
Y CTA+N G S +V+ P + + P ++ + L C A E
Sbjct: 323 NYRCTASNALGT-ASHNFHVVVEEPPRWTKKPQSAVYSSGGSGVLLCEAEGE 373
>gi|47228831|emb|CAG07563.1| unnamed protein product [Tetraodon nigroviridis]
Length = 598
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 168/355 (47%), Gaps = 27/355 (7%)
Query: 139 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 198
+NG+L IS V++ D G+Y+C A N G+ S G L+V P+ + + ++
Sbjct: 1 MDNGSLRISNVTKMDDGVYTCVARNQFGVASSAGSLLVKE-PTAITSPAGHLDVTVGESI 59
Query: 199 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
L C + L++ + W N I + G + I N AG+Y C
Sbjct: 60 VLPCQVSHDPTLELKFTWFFNEQLIHFGNHWAFFEKVGGRSAGDIMIRNIQPKHAGKYTC 119
Query: 259 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 318
V++ V +S T V+V GPPG PG +V EV +T+A++ W+ G N PI Y I ART
Sbjct: 120 AVQTKVDSVSIATDVVVRGPPGPPGDCRVTEVTETTASVSWSPGTDNYSPILSYAIQART 179
Query: 319 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPSP 377
+ W V+ + G K+ S + L PW YEF+V+A N +G GEPS PS
Sbjct: 180 PFFLGWQAVTT------IPELLGGKQLSATVIDLSPWVEYEFRVLATNSIGTGEPSRPSK 233
Query: 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 437
+ T P P+R+ GGGG +L I+WEP+P E Q+ Y + +R
Sbjct: 234 KARTKETLPRVTPARVNGGGGGRSELVITWEPVPEELQSGLGFGYVVAFRP--------- 284
Query: 438 TLKEYGNVGIAVVRIPSEFY---------YTEYEVKVQAINDVGPGPESEVVTIW 483
L G + AV + Y ++ Y+VKV N+ G GP S V TI+
Sbjct: 285 -LGAQGWMQAAVTSPEASRYVFKNESIPPFSPYQVKVGVYNNRGEGPFSPVTTIY 338
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 168/462 (36%), Gaps = 77/462 (16%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-----GGNVTIFCNPE 114
D +Y C A+NQ S+ L V K P + AG G ++ + C
Sbjct: 15 DDGVYTCVARNQFGVASSAGSLLV--------KEPTAITSPAGHLDVTVGESIVLPCQVS 66
Query: 115 AAP--KPKFVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHG 166
P + KF W + +I G FE G+++I + +G Y+C A
Sbjct: 67 HDPTLELKFTWFFNEQLIHFGNHWAFFEKVGGRSAGDIMIRNIQPKHAGKYTC-AVQTKV 125
Query: 167 MDESKGRLIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEE---LLDVAYIWTHNG 220
S +V+ GP PP ++T + S T+ +L A I
Sbjct: 126 DSVSIATDVVVRGPPG----PPGDCRVTEVTETTASVSWSPGTDNYSPILSYA-IQARTP 180
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 280
+G + + P + + G L T + EYE V +T I G P
Sbjct: 181 FFLGWQAVTTI--PEL-LGGKQLSATVIDLSPWVEYEFRVLAT--------NSIGTGEPS 229
Query: 281 LPGGVQVVEVHKTSATIQWTDGATNGR--------PITH---------YKIIARTNWNST 323
P + T +G GR P+ Y + R
Sbjct: 230 RPSKKARTKETLPRVTPARVNGGGGGRSELVITWEPVPEELQSGLGFGYVVAFRPLGAQG 289
Query: 324 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 383
W + V E RY + E+ + P+S Y+ KV N G G P SP +
Sbjct: 290 WMQAA--VTSPEASRYVFKNES-----IPPFSPYQVKVGVYNNRGEG-PFSPVTTIYSAE 341
Query: 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FW--RKKNDTEFQSETLK 440
++P +AP R+ ++ ++W+PL + Y++ +W R+K DT + ++
Sbjct: 342 EEPSRAPGRLRARSVSASEVEVTWKPLAWSNSRRRILGYELQYWSERQKPDT---ASVIR 398
Query: 441 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
GN ++R Y V ++A N G GP+S V +
Sbjct: 399 TVGNKTSILIR--DLEGRCTYYVSLRAYNSAGVGPQSTTVNV 438
>gi|395541203|ref|XP_003772536.1| PREDICTED: contactin-1-like, partial [Sarcophilus harrisii]
Length = 643
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 160/325 (49%), Gaps = 20/325 (6%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P T W RNG + L L DN
Sbjct: 332 DIGSDLYWPCVATGKPIPTIRWLRNGYAYHKGELRLYG----LTFDNA------------ 375
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L++L + P+F+ P++ +T A +GG V I C P+AAPKPKF
Sbjct: 376 GMYQCIAENAHGAIYANAELKILAMAPTFEMNPMKKKTLAAKGGRVLIECKPKAAPKPKF 435
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K + + R I+++G+L I ++R D G Y+C A N G + G L++
Sbjct: 436 SWSKGTEWLVNSTRILIWDDGSLEIRNITRADEGTYTCFAENNRGKANNTGTLLITDATR 495
Query: 182 YYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
LPP + N ++C+A + LD+ +IW+ NG I N N ID
Sbjct: 496 I--TLPPANADVTVGENATMQCAASHDPALDLTFIWSLNGYVIDFNKENSHYMRNFMIDS 553
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGGV++ ++ TS + W
Sbjct: 554 NGDLLIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRIEDIRDTSVALTW 613
Query: 300 TDGATNGRPITHYKIIARTNWNSTW 324
+ G+ N PI+ Y I +T + W
Sbjct: 614 SRGSDNHSPISKYSIQTKTILSDDW 638
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 30 PIFEEQPIDT-IYPEESPDGKVSLNCRARASPFPVYKWRMNNWDIDLTNERYSMVGGNLV 88
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
I +P D+G Y C A+N++GM S + Y + PP ++ + L L
Sbjct: 89 INNPDKLRDAGKYFCLASNIYGMVRSTEATLSF---GYLDPFPPEERVEVKVKEGIGLVL 145
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N I MD ++ G L I N +D G Y C
Sbjct: 146 LCDPPYHFPDDLSYRWLLNEFPIFITMDKRRY----VSQTNGNLYIANVEESDRGNYSCF 201
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + +++ +Q+ D
Sbjct: 202 VSSP----SITKSVFSKFIPLIPLSDRTTKLYPADIKVQFKD 239
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 98/266 (36%), Gaps = 48/266 (18%)
Query: 18 DVTYSWFRNGELLNSETLPLE-DQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + D+ RY Q N E D Y C + T+
Sbjct: 156 DLSYRW-----LLNEFPIFITMDKRRYVSQTNGNLYIANVEESDRGNYSCFVSSPSITKS 210
Query: 77 SSAQL--------RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
++ R L P+ K + +TYA G NVT+ C P P+ W+K
Sbjct: 211 VFSKFIPLIPLSDRTTKLYPADIKVQFK-DTYALMGHNVTLECFALGNPVPEIRWRKVLE 269
Query: 126 ----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG KIF + +D G Y C A N+ G D + R+ V P
Sbjct: 270 PMPSTAEISMSGAVLKIFN--------IQLEDEGTYECEAENIRGKDRHQARIYVQAFPE 321
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E + +L C A + + + W NG G
Sbjct: 322 WVEHI-NDTEADIGSDLYWPCVATGKPIPTIR--WLRNGYAYHK---------------G 363
Query: 242 LLEITNASFADAGEYECVVKSTVGKI 267
L + +F +AG Y+C+ ++ G I
Sbjct: 364 ELRLYGLTFDNAGMYQCIAENAHGAI 389
>gi|405958312|gb|EKC24451.1| Neuroglian [Crassostrea gigas]
Length = 1178
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 195/423 (46%), Gaps = 22/423 (5%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD-NVLTIRYLNPERDPAM 63
A T+ C+A G P+ +WF NG L T+P+ +R+ D N +T LN + D +
Sbjct: 136 ASTTFICKAKGYPEPKIAWFVNGIKLEESTVPIVRSERFIKPDANNITFVQLN-KNDHMV 194
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
QC A N ++ L +L +P+ P + E EG ++ + C P P W
Sbjct: 195 LQCNASNIHGYVFADVYLNILEEEPAIIVPPAK-ELKVAEGRDIELTCITSGKPDPIITW 253
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+K+G I +GGR +I +NGNL + V D+G Y+C A N + DE+ G LIV +
Sbjct: 254 RKEGEQI-TGGRYQIQQNGNLHVQNVVLSDAGNYTCHAYNKYNFDEAWGILIV-RAKTRT 311
Query: 184 EQLPPKITIAAHRNLQLRCSAHTE--ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
Q P + + A + + CS T+ E+ ++ W + I D + N
Sbjct: 312 VQKPGGLEVTAGSDAKFTCSGTTDFAEIKNLRISWLKDNKPITTNDQRMTQ----NFQDN 367
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I+ D+G Y CVV + + + + V+ P P V ++ +T A I WT
Sbjct: 368 SLTISGTIARDSGTYTCVVSNGLDNATAGAILTVKDKPDPPISVALITCGETEAEISWTK 427
Query: 302 GATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
GA+N PI ++ I T+++ WF + +V+ + S E L PW Y F+
Sbjct: 428 GASNNAPIQYFIIQYNTSFSPDEWFMGASNVLA---------TQNSGEVKLTPWVEYNFR 478
Query: 361 VIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
V+A N++G EPS + T A +P + P + G K L I W P+P + N
Sbjct: 479 VLATNKIGISEPSYHTETVCKTNAARPSKNPENVRTIGDKRNYLIIEWTPMPPIEHNGQQ 538
Query: 420 IYY 422
Y
Sbjct: 539 FKY 541
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 50 LTIRYLNPERDPAMYQCRAKNQLKTR-YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 108
LTI L E D Y+C N R + + +RV + KP +++ P + ET G + T
Sbjct: 84 LTIPNLT-EEDAGPYECYGTNTQGPRAFRNFVIRVES-KPYWEEEPKDVETSVG--ASTT 139
Query: 109 IFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIF---ENGNLLISPVSRDDSGIYSCTA 161
C + P+PK W +G + R + F + N+ ++++D + C A
Sbjct: 140 FICKAKGYPEPKIAWFVNGIKLEESTVPIVRSERFIKPDANNITFVQLNKNDHMVLQCNA 199
Query: 162 TNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
+N+HG + L +L P+ ++ +A R+++L C T D W G
Sbjct: 200 SNIHGYVFADVYLNILEEEPAIIVPPAKELKVAEGRDIELTCI--TSGKPDPIITWRKEG 257
Query: 221 VRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
+I G + + G L + N +DAG Y C
Sbjct: 258 EQITGGRYQIQQ---------NGNLHVQNVVLSDAGNYTC 288
>gi|126342128|ref|XP_001378160.1| PREDICTED: neural cell adhesion molecule L1 [Monodelphis domestica]
Length = 1344
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 206/473 (43%), Gaps = 30/473 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG L + L D+ +Q L + + P D + QC A+N
Sbjct: 442 CQVQGRPRPMVTWRINGVSLEN----LTRDDKLRVQGGALILSNVQP-NDTMVTQCEARN 496
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDGNI 129
+ ++A + V+ L P+ P +G + CN P P W +D
Sbjct: 497 KHGLLLANAYISVVQL-PTKILTPDNKTYREVQGSTAYLLCNAFGVPMPSIQWLNRDQAT 555
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
+ R + NG L I + +D+G Y C A N K L V + ++ P
Sbjct: 556 VLQDERFVPYANGTLAIRDLQTNDTGSYFCQADNDQNRVSIKAHLQVKEA-TQIKKGPED 614
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
T+ N+ C + L++ W N I + + I L I +
Sbjct: 615 RTVKKGSNVNFPCLVSFDPSLNIQIDWYWNDQNIKDF----YKEDKYLIKEEELTIISLD 670
Query: 250 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 309
+AD G Y CV K+ + + K TV+V G PG G +++ + + W+ + PI
Sbjct: 671 YADQGNYSCVAKTALDSVEKKATVLVVGSPGPVGQLELYKQKDFHVQLSWSPAEEHNSPI 730
Query: 310 THYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
Y I RT TW+ ++ V G E S L P+ Y F+VIA N+
Sbjct: 731 EKYNIEFEDRTMEPGTWYPLAT-VPGNET---------STRLKLSPFVHYNFRVIANNKF 780
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G EPS S + TP P + P+ + G G + ++ I+W+PL N P + Y++ WR
Sbjct: 781 GASEPSPDSEPFITPKSVPEKNPTNVKGEGNETNNMVITWKPLKWIDWNGPELKYRVQWR 840
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+KN++E++ ++ V V P+ + YE+KVQAIN+VG GP+ +V
Sbjct: 841 QKNESEWREVMVRASKYV---VSNTPT---FVPYEIKVQAINEVGKGPDPHIV 887
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 110/302 (36%), Gaps = 50/302 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSE----TLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+ CEA G P+V + W + + E + + I N +R
Sbjct: 142 DIVLKCEASGKPEVQFRWTKENIHFSPEKELGATTHINSGSFIITGNTSNFA----QRYQ 197
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEA-AP 117
Y+C A N+L T S V P + K +P E E EG +V + CNP A A
Sbjct: 198 GTYRCFASNRLGTAMSHEIHLVAEGAPKWPKEKVQPFEVE----EGQSVVLPCNPPASAV 253
Query: 118 KPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNV----------- 164
+P+ W I R + +NGNL + V +DS Y C A +
Sbjct: 254 QPRIYWMNSRIFHIAQDERVTMGQNGNLYFANVLTNDSHSDYICHAHFLGARTIMQKEPI 313
Query: 165 -------HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 217
+ M + RL++ G L ++ + L L C A + + +
Sbjct: 314 DLRVKPTNNMIYRRPRLLLPEG------LTSRLVALRGQPLVLECIAEGFPTPTIKWSYP 367
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
N ++ G + N N L + D GEY C ++T+G V VE
Sbjct: 368 SNQMQAGRVTYQ-----NFN---KTLRLVRVEEEDDGEYRCWAENTLGSAQHVYYVTVEA 419
Query: 278 PP 279
P
Sbjct: 420 AP 421
>gi|332019316|gb|EGI59823.1| Neuroglian [Acromyrmex echinatior]
Length = 1291
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 213/474 (44%), Gaps = 30/474 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA GVP W RNG+ ++ E++ R ++++ R + + D A Y C A N
Sbjct: 394 CEASGVPVPEIKWIRNGKPISEAP---ENKRRKVTSNSIIIERLV--KNDTANYGCNATN 448
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
Y + VL L P + P+ + + + I C APKP+ W ++G +
Sbjct: 449 SFGYVYKDVFINVLALAPDITQPPMNLSSV--DSKTIRITCRVFGAPKPEVKWIRNGQEL 506
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
+GGR KI + G+L I V D+G Y+C A N G + L+V + +P
Sbjct: 507 -TGGRYKILDVGDLEIENVIFLDAGTYTCYAKNKLGEVNASAILMVKEH-TRITDVPEDY 564
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
+AA RC+A T+ L + W NG I D E+E + L IT +
Sbjct: 565 EVAAGSTATFRCNAVTDPTLPLTIDWLSNGQPI---DF-EMEPRFVRSSDYSLLITKTTE 620
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
D+G Y CV ++ + + S + T+IV+ P P + + + SA +QW N PI
Sbjct: 621 LDSGIYTCVARTDLDETSAQATLIVQDVPNAPRLISI-KCQSNSAIVQWIPMGDNRSPIL 679
Query: 311 HYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 369
Y I T + TW + V + + E + PW+ Y F+V+A N++G
Sbjct: 680 RYTIQYNTTFTPDTWEIAHDQVPATD---------QTYEVPMSPWANYTFRVLAWNKIGT 730
Query: 370 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429
PSS S T D P + P + G G +L ISW + + + N Y+IF+R+
Sbjct: 731 SLPSSHSDVCTTLPDLPNKNPDNVVGKGTTPQNLVISWTVMSQIEHNGAKFEYRIFYRRD 790
Query: 430 -NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG--PESEVV 480
++ + + ++ + V P+ Y Y +KV AIN+ G P EV+
Sbjct: 791 IRGEDWITNNIHDWRKNTLVVENQPT---YQRYRIKVVAINEKGECRVPAKEVI 841
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 110/283 (38%), Gaps = 42/283 (14%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RD 60
+N CEA G P Y W +NG+ P D DR Q T+ P+ D
Sbjct: 85 ENHKPFLIECEAEGEPAPVYHWIKNGKPF---LWPAYD-DRISQQPGRGTLVISRPQNED 140
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCN-PEAA 116
YQC A+N T S++ SFK PL A EG + C P+
Sbjct: 141 LGQYQCFAENDGGTATSNSVFVRKAELNSFKDENPIPLS----ATEGAPFKLTCQPPDGW 196
Query: 117 PKPKFVWKKDGNIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMD 168
PKP W +I GS R + GNL S V+RDD+ Y+C AT+V +
Sbjct: 197 PKPNVYWLIQ-DIAGSIKSINNSRMTLDPEGNLWFSNVTRDDASDDFYYACAATSVFRNE 255
Query: 169 ESKGRLIVLH-----GPSYYEQLPPKITIAAHRN--------LQLRCSAHTEELLDVAYI 215
G ++L+ S + P+ +N ++L C L + +
Sbjct: 256 YKVGNKVLLNVISTGASSGQNKYAPERQYVTRKNEIAMRGKKVELYCIFGGTPLPQM--V 313
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
W+ NG I D + N G L I + +F D G+Y C
Sbjct: 314 WSKNGQMIKPSD--RIIQGNY---GKSLIIKHVNFEDQGQYTC 351
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 72/192 (37%), Gaps = 19/192 (9%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
TC FG P W RNG+ L + D I++ + D Y C AK
Sbjct: 486 TCRVFGAPKPEVKWIRNGQELTGGRYKILDVGDLEIENVIFL--------DAGTYTCYAK 537
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDG 127
N+L +SA +L +K + + + G T CN P W +G
Sbjct: 538 NKLGEVNASA---ILMVKEHTRITDVPEDYEVAAGSTATFRCNAVTDPTLPLTIDWLSNG 594
Query: 128 NIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
I + + + LLI+ + DSGIY+C A ++ LIV P+
Sbjct: 595 QPIDFEMEPRFVRSSDYSLLITKTTELDSGIYTCVARTDLDETSAQATLIVQDVPN---- 650
Query: 186 LPPKITIAAHRN 197
P I+I N
Sbjct: 651 APRLISIKCQSN 662
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 159
A G V ++C P P+ VW K+G +I R G +L+I V+ +D G Y+C
Sbjct: 292 AMRGKKVELYCIFGGTPLPQMVWSKNGQMIKPSDRIIQGNYGKSLIIKHVNFEDQGQYTC 351
Query: 160 TATNVHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 216
A+N G+D+++ L V+ P Y+ P + A ++RC A + ++ W
Sbjct: 352 EASN--GVDQAQSYSINLQVMASP-YFIVEPEFVNAAEDETAEIRCEASGVPVPEIK--W 406
Query: 217 THNG 220
NG
Sbjct: 407 IRNG 410
>gi|426249267|ref|XP_004018371.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Ovis aries]
Length = 1209
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 224/487 (45%), Gaps = 49/487 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAMYQC 66
CEA G P+ T W NG LP+E R +V++ I + N + + A+YQC
Sbjct: 352 CEAEGRPEPTIKWRVNG-------LPIE---RNPFSGDVISPGEISFTNVQPNHTAVYQC 401
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKK 125
A N T ++A + V+ ++P + + E YA G + + C A+P+ W+K
Sbjct: 402 EASNVHGTILANANIDVVDVRPLIQT--ADEENYATVVGYSAFLHCEFFASPEAIVSWQK 459
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY- 183
+ G R + ENG L I+ + +D+G YSC N G L + + +
Sbjct: 460 VEEAKPLDGSRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATNLRV 519
Query: 184 ----EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
++P T+ H + +C +H + L ++ W+ +G ++N + I ID
Sbjct: 520 SPKNPRVPKSHTLELH--CESKCDSHLKYSLKLS--WSKDGEA---FEINGTDDGRIIID 572
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I+N + D G Y C + + I+ T V V P P + + E S + W
Sbjct: 573 GANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLDVPDPPENLHLSERQNRSVRLTW 632
Query: 300 TDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
G + I+ Y + N W +E+ R G KE ++ L P+ Y
Sbjct: 633 EAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRY 682
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G +PS PS + TP P + P I + ++ I WEPL +QN
Sbjct: 683 QFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNG 742
Query: 418 PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
P + Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE
Sbjct: 743 PGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPE 796
Query: 477 SEVVTIW 483
+ V ++
Sbjct: 797 PQSVILY 803
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 188/497 (37%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PL D RY + +N E D Y C +N
Sbjct: 445 CEFFASPEAIVSWQKV-----EEAKPL-DGSRYHVHENGTLQITETTEEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P K P +++ E + C+ K W K
Sbjct: 499 AKGKTAVTANLDIRNATNLRVSP---KNPRVPKSHTLEL-HCESKCDSHLKYSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIYSC+A ++ VL P
Sbjct: 555 DGEAFEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL + G
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGK 668
Query: 242 LLEITNASFADAGEYE--CVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ S A Y+ + + VG+ + + E PP P ++V
Sbjct: 669 ETTVV-LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKE 727
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 728 MIIKWEPLKAMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 772
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ +V A N LG G P PQ + D P AP G + +
Sbjct: 773 MTPAVYAPYDVQVQAINHLGSG----PEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKV 828
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E+ + Y++ W K KE + + R +PS ++E+
Sbjct: 829 TWSTVPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEF 888
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 889 HLTVLAYNSKGAGPESE 905
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 112/296 (37%), Gaps = 48/296 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAMYQCR 67
C A G P+ + W ++ + N L D R + +N T R N Y+C
Sbjct: 57 CVAKGNPEPKFLWNKDDKPFN-----LSDP-RIIVSNNGGTFRIPNDGHISHFQGKYRCF 110
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 111 ASNKLGIAMSEEIEFIVPNTPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIYW 166
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSC------------------TATN 163
+ + I R + + G+L + V DS Y C T +
Sbjct: 167 MNIELEHIKQDERVYMSQKGDLYFANVEEQDSRNDYCCFAAFPRLRTIVQKMPMKLTVNS 226
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ + + K RL++ S E IT+ L L C A VA+ +
Sbjct: 227 SNSIKQRKPRLLLPPPESGSES---SITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPK 283
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G E+ N ++D L+I N S+ D G Y C + +G + + V VE PP
Sbjct: 284 GG------ESKNNSVD--TLKIENVSYEDKGNYRCTANNFLGSATHEFHVTVEEPP 331
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P PK W K G + GG K L I VS +D G
Sbjct: 247 ESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESKNNSVDTLKIENVSYEDKG 306
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
Y CTA N G + + V P + ++
Sbjct: 307 NYRCTANNFLGSATHEFHVTVEEPPRWTKK 336
>gi|317418926|emb|CBN80964.1| Neural cell adhesion molecule L1-like protein [Dicentrarchus
labrax]
Length = 1247
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 223/487 (45%), Gaps = 41/487 (8%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDP 61
+D+ C A G P T +W NG +PL++ +R + D +L +R D
Sbjct: 350 SDVLIKCSASGTPQPTITWRVNG-------VPLQEAPAANRKVLGDTIL-LRNAKAS-DS 400
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPK 120
A+YQC A N+ +T S+A + ++ L P + E E Y+ EG V + C ++P
Sbjct: 401 AVYQCEASNRHRTLLSNANIMIMNLPPMILTK--EGEDYSAVEGKGVMMHCKVFSSPPST 458
Query: 121 FVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W KD + G R + +NG+L I V + D+G Y+C A N G + ++ +
Sbjct: 459 VTWSKDDSSESVEGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEG-SSAIDTMLYVKD 517
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNIN 237
P+ P + I QL C A +E D+ +W + + I LN E
Sbjct: 518 PTRIVVPPEHLQILIGTTAQLSCLAEYDESFKNDIELLWEKDDMEIA---LNYTENSRYF 574
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
++ G+L+I N S D G Y CV ++ V + + +IV P P + + E S +
Sbjct: 575 VEDGILQIINVSHWDQGVYTCVARTPVDQDTASAWLIVLDVPDAPEYLVLSERKSKSVKL 634
Query: 298 QWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+W G + T + I + W W KE+ R G +++ L
Sbjct: 635 KWNPGDNHNSSTTEFIIEYEESQWEPGNW---------KELLRVPGNHNSAVLK-LHGNV 684
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y F+V N +G G S P+ +Y PA P + P I G ++ I+WEPL +
Sbjct: 685 DYCFRVSGVNSVGRGPSSEPTERYKPPAAAPDKNPENIKIEGHLAHEMDINWEPLLPIEH 744
Query: 416 NAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N P + YK+ +R+++ + ++Q +K + V V P+ + YE+K+QA N+ G G
Sbjct: 745 NGPGLEYKVSYRRQDLEEDWQEHMVKRHSFV---VKNTPT---FVPYEIKIQAKNNQGWG 798
Query: 475 PESEVVT 481
P+ ++VT
Sbjct: 799 PDPKIVT 805
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 44/289 (15%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ DL C A G P W + G L + LE+ + I V + D
Sbjct: 260 EEDLKLECIAEGFPTPQVEWVKVGHRLPIKA-KLENHGKLLIVPRV-------EQEDSGK 311
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C+AKN L + +T++ P + P ES+ + G +V I C+ P+P
Sbjct: 312 YMCKAKNALG---EAVHYFTVTIEEPPEWVSEP-ESQ-LSMIGSDVLIKCSASGTPQPTI 366
Query: 122 VWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W+ +G + RK+ + +L+ DS +Y C A+N H S +++++
Sbjct: 367 TWRVNGVPLQEAPAANRKVLGD-TILLRNAKASDSAVYQCEASNRHRTLLSNANIMIMN- 424
Query: 180 PSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE- 230
LPP I + + + + C + V W+ + D +E
Sbjct: 425 ------LPPMILTKEGEDYSAVEGKGVMMHCKVFSSPPSTVT--WSKD-------DSSES 469
Query: 231 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+E P + D G LEI + D G+Y C+ K+T G + T + V+ P
Sbjct: 470 VEGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEGSSAIDTMLYVKDP 518
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 112/289 (38%), Gaps = 35/289 (12%)
Query: 10 TCEAFGVPDVTYSWFRNGE----LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
TCEA G P+ + W +NG+ L+ + E+ + I +N Y Y+
Sbjct: 63 TCEAKGNPEPEFRWMKNGQEFDPFLDPRLMKEENSGTFVIPNNGNLTEY------QGTYR 116
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWK 124
C A N+L T S ++ P F K L+ EG T+ C+P + P + W
Sbjct: 117 CYASNKLGTAISKEIEFIVPHVPKFPKETLDP-VVVEEGQPFTLKCDPPKGIPPLQIYWM 175
Query: 125 KDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTAT--NVHGMDESKGRLIVLHGP 180
I R + NG+L S V +D Y C A + + + +++
Sbjct: 176 TISLQHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIVQTT 235
Query: 181 SYYEQLPPKI----------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ Q P + + +L+L C A V + V++G+ +
Sbjct: 236 NAILQRRPSLLTPSSERSETQLVKEEDLKLECIAEGFPTPQVEW------VKVGHRLPIK 289
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G LL + D+G+Y C K+ +G+ TV +E PP
Sbjct: 290 AKLEN---HGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPP 335
>gi|426249265|ref|XP_004018370.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Ovis aries]
Length = 1225
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 224/487 (45%), Gaps = 49/487 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAMYQC 66
CEA G P+ T W NG LP+E R +V++ I + N + + A+YQC
Sbjct: 368 CEAEGRPEPTIKWRVNG-------LPIE---RNPFSGDVISPGEISFTNVQPNHTAVYQC 417
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKK 125
A N T ++A + V+ ++P + + E YA G + + C A+P+ W+K
Sbjct: 418 EASNVHGTILANANIDVVDVRPLIQT--ADEENYATVVGYSAFLHCEFFASPEAIVSWQK 475
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY- 183
+ G R + ENG L I+ + +D+G YSC N G L + + +
Sbjct: 476 VEEAKPLDGSRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNATNLRV 535
Query: 184 ----EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
++P T+ H + +C +H + L ++ W+ +G ++N + I ID
Sbjct: 536 SPKNPRVPKSHTLELH--CESKCDSHLKYSLKLS--WSKDGEA---FEINGTDDGRIIID 588
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I+N + D G Y C + + I+ T V V P P + + E S + W
Sbjct: 589 GANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLDVPDPPENLHLSERQNRSVRLTW 648
Query: 300 TDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
G + I+ Y + N W +E+ R G KE ++ L P+ Y
Sbjct: 649 EAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRY 698
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G +PS PS + TP P + P I + ++ I WEPL +QN
Sbjct: 699 QFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNG 758
Query: 418 PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
P + Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE
Sbjct: 759 PGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPE 812
Query: 477 SEVVTIW 483
+ V ++
Sbjct: 813 PQSVILY 819
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 188/497 (37%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PL D RY + +N E D Y C +N
Sbjct: 461 CEFFASPEAIVSWQKV-----EEAKPL-DGSRYHVHENGTLQITETTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P K P +++ E + C+ K W K
Sbjct: 515 AKGKTAVTANLDIRNATNLRVSP---KNPRVPKSHTLEL-HCESKCDSHLKYSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIYSC+A ++ VL P
Sbjct: 571 DGEAFEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL + G
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGK 684
Query: 242 LLEITNASFADAGEYE--CVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ S A Y+ + + VG+ + + E PP P ++V
Sbjct: 685 ETTVV-LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKE 743
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 744 MIIKWEPLKAMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 788
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ +V A N LG G P PQ + D P AP G + +
Sbjct: 789 MTPAVYAPYDVQVQAINHLGSG----PEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKV 844
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E+ + Y++ W K KE + + R +PS ++E+
Sbjct: 845 TWSTVPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEF 904
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 905 HLTVLAYNSKGAGPESE 921
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P PK W K G + GG K L I VS +D G
Sbjct: 263 ESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESKNNSVDTLKIENVSYEDKG 322
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
Y CTA N G + + V P + ++
Sbjct: 323 NYRCTANNFLGSATHEFHVTVEEPPRWTKK 352
>gi|426249269|ref|XP_004018372.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Ovis aries]
Length = 1171
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 219/484 (45%), Gaps = 43/484 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT---IRYLNPERD-PAMYQC 66
CEA G P+ T W NG LP+E R +V++ I + N + + A+YQC
Sbjct: 368 CEAEGRPEPTIKWRVNG-------LPIE---RNPFSGDVISPGEISFTNVQPNHTAVYQC 417
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKK 125
A N T ++A + V+ ++P + + E YA G + + C A+P+ W+K
Sbjct: 418 EASNVHGTILANANIDVVDVRPLIQTA--DEENYATVVGYSAFLHCEFFASPEAIVSWQK 475
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ G R + ENG L I+ + +D+G YSC N G L + + +
Sbjct: 476 VEEAKPLDGSRYHVHENGTLQITETTEEDAGSYSCWVENAKGKTAVTANLDIRNA-TNLR 534
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
P + L+L C + + L + W+ +G ++N + I IDG
Sbjct: 535 VSPKNPRVPKSHTLELHCESKCDSHLKYSLKLSWSKDGEA---FEINGTDDGRIIIDGAN 591
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I+N + D G Y C + + I+ T V V P P + + E S + W G
Sbjct: 592 LTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLDVPDPPENLHLSERQNRSVRLTWEAG 651
Query: 303 ATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
+ I+ Y + N W +E+ R G KE ++ L P+ Y+F+
Sbjct: 652 DDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVVLSLAPYVRYQFR 701
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA NE+G +PS PS + TP P + P I + ++ I WEPL +QN P +
Sbjct: 702 VIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPGL 761
Query: 421 YYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE +
Sbjct: 762 EYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVQVQAINHLGSGPEPQS 815
Query: 480 VTIW 483
V ++
Sbjct: 816 VILY 819
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 188/497 (37%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PL D RY + +N E D Y C +N
Sbjct: 461 CEFFASPEAIVSWQKV-----EEAKPL-DGSRYHVHENGTLQITETTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + L + P K P +++ E + C+ K W K
Sbjct: 515 AKGKTAVTANLDIRNATNLRVSP---KNPRVPKSHTLEL-HCESKCDSHLKYSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIYSC+A ++ VL P
Sbjct: 571 DGEAFEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL + G
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEEL----TRVQGK 684
Query: 242 LLEITNASFADAGEYE--CVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ S A Y+ + + VG+ + + E PP P ++V
Sbjct: 685 ETTVV-LSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKE 743
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 744 MIIKWEPLKAMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 788
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQ---YNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ +V A N LG G P PQ + D P AP G + +
Sbjct: 789 MTPAVYAPYDVQVQAINHLGSG----PEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKV 844
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E+ + Y++ W K KE + + R +PS ++E+
Sbjct: 845 TWSTVPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEF 904
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 905 HLTVLAYNSKGAGPESE 921
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P PK W K G + GG K L I VS +D G
Sbjct: 263 ESSITVLKGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESKNNSVDTLKIENVSYEDKG 322
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
Y CTA N G + + V P + ++
Sbjct: 323 NYRCTANNFLGSATHEFHVTVEEPPRWTKK 352
>gi|351695047|gb|EHA97965.1| Neural cell adhesion molecule L1-like protein [Heterocephalus
glaber]
Length = 1126
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG + + L D F ++ ++ L+P A+YQC A N
Sbjct: 269 CEAEGEPQPTIKWRVNGFPIGNH---LFAGDVVFPRE--VSFTNLHPNHT-AVYQCEASN 322
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ + P + + + E YA G + + C A+P+ W++
Sbjct: 323 IHGTVLANANIDVVDVIPLIQTK--DEENYATVIGYSAFLHCEYFASPEAIVTWQRMDEA 380
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR +I ENG L I + +D+G YSC N G L + + + P
Sbjct: 381 QALEGRRYRIHENGTLQILGTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 439
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ L+L C + + L + W+ +G + ++N E I ID L I+
Sbjct: 440 NPRVPKSHILELHCESKCDSHLKHSLKLSWSKDG---EDFEINGTEDGRIVIDRANLTIS 496
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G + C+ ++ + I+ T V V P P +Q+ E S + W GA +
Sbjct: 497 NVTLEDQGVFSCLAQTALDSIAEATQVTVLDVPDPPRNLQLSERQNRSVRLSWEAGADHN 556
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G++ ++ L P+ Y+F+V A
Sbjct: 557 SNISEYIVEFEGNREEPGRW---------EELTRVQGKETTALLQ-LAPYVRYQFRVTAV 606
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 607 NEVGKSHPSQPSDYHETPPAAPEKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 666
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE + V ++
Sbjct: 667 TWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINQLGSGPEPQSVVLY 720
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155
ES +G + + C E P P+ WKK G + G K L I +S D G
Sbjct: 164 ESSVTILKGDTLLLECFAEGLPTPQVEWKKMGGDLPKGRETKENYGKTLKIENISYRDKG 223
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y CTA N G +IV P + ++ P + + L C A E +
Sbjct: 224 NYRCTANNFLGTANHDFHVIVEEPPRWRKK-PESGVYSTGSSGILLCEAEGEPQPTIK-- 280
Query: 216 WTHNGVRIGN 225
W NG IGN
Sbjct: 281 WRVNGFPIGN 290
>gi|403309237|ref|XP_003945025.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Saimiri boliviensis boliviensis]
Length = 1171
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 220/482 (45%), Gaps = 39/482 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P +YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-GVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + ++ ++P + + E YA G + + C A+P+ W+K
Sbjct: 422 VHGTILANANINIVDVRPLIQTE--DEENYATVVGYSAFLHCKFFASPEAIVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENSIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
I L+L +C AH + L ++ W+ +G ++N E I IDG L
Sbjct: 539 NPRIPKLHMLELHCESKCDAHLKHSLKLS--WSKDGEA---FEINGTEDGRIIIDGANLT 593
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + D G Y C + + + T V V P P + + E S + W G
Sbjct: 594 ISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDD 653
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ I+ Y + F ++ +G+ E+ R G+K I L P+ Y+F+VI
Sbjct: 654 HNSNISEYIV---------EFEGNKEELGRWEELTRVQGKKTTVIL-PLAPFVRYQFRVI 703
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y
Sbjct: 704 AMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 763
Query: 423 KIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
++ W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT
Sbjct: 764 RVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVT 817
Query: 482 IW 483
++
Sbjct: 818 LY 819
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 189/497 (38%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 461 CKFFASPEAIVSWQKV-----EEAKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 SIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDAHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS ++ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSA---HTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
E L ++ +R+++L A H + + + N +G + E +
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEELGRWE----ELTRVQGK 684
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 685 KTTVILPLAPFVRY-QFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKE 743
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 744 MIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 788
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ KV A N+LG G P PQ T D P AP G + +
Sbjct: 789 MTPAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKV 844
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+++ + Y+I W K KE + + R +PS ++E+
Sbjct: 845 TWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEF 904
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 905 HLTVLAYNSKGAGPESE 921
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 110/315 (34%), Gaps = 70/315 (22%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP--------- 61
CEA G P+ T++W + +D YF ++T R P
Sbjct: 57 CEAKGNPEPTFTWTK------------DDNPFYFTDPRIITSNSSGTFRIPNEGHISHFQ 104
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A N+L S ++ P F K PLE E EG + + CNP
Sbjct: 105 GKYRCFASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVE----EGDPIVLPCNPPKGLP 160
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA-------------- 161
P ++ + + I R + + G+L + V DS Y C A
Sbjct: 161 PLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPM 220
Query: 162 -----TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSA 204
+ H D S I S ++ LPP ITI L L C A
Sbjct: 221 KLTVNSLKHANDSSSSTEIGSKANSIKQRKPRLLLPPTESGSESSITILKGETLLLECFA 280
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
E L W G G++ N G L+I N S+ D G Y C + +
Sbjct: 281 --EGLPTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTATNFL 332
Query: 265 GKISTKTTVIVEGPP 279
G + VIVE PP
Sbjct: 333 GTATHDFHVIVEEPP 347
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 91 KKRPLESETYAGEGGNVTIF--------CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
K R L T +G ++TI C E P P+ W K G + G K
Sbjct: 250 KPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTATN G +IV P + ++ P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTATNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPIDN 389
>gi|403309233|ref|XP_003945023.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Saimiri boliviensis boliviensis]
Length = 1209
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 220/482 (45%), Gaps = 39/482 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P +YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-GVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + ++ ++P + + E YA G + + C A+P+ W+K
Sbjct: 406 VHGTILANANINIVDVRPLIQTE--DEENYATVVGYSAFLHCKFFASPEAIVSWQKVEEA 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENSIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
I L+L +C AH + L ++ W+ +G ++N E I IDG L
Sbjct: 523 NPRIPKLHMLELHCESKCDAHLKHSLKLS--WSKDGEA---FEINGTEDGRIIIDGANLT 577
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + D G Y C + + + T V V P P + + E S + W G
Sbjct: 578 ISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDD 637
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ I+ Y + F ++ +G+ E+ R G+K I L P+ Y+F+VI
Sbjct: 638 HNSNISEYIV---------EFEGNKEELGRWEELTRVQGKKTTVIL-PLAPFVRYQFRVI 687
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y
Sbjct: 688 AMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 747
Query: 423 KIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
++ W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT
Sbjct: 748 RVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVT 801
Query: 482 IW 483
++
Sbjct: 802 LY 803
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 189/497 (38%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 445 CKFFASPEAIVSWQKV-----EEAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 499 SIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDAHLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS ++ +D GIY C+A ++ VL P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSA---HTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
E L ++ +R+++L A H + + + N +G + E +
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEELGRWE----ELTRVQGK 668
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 669 KTTVILPLAPFVRY-QFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKE 727
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 728 MIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 772
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ KV A N+LG G P PQ T D P AP G + +
Sbjct: 773 MTPAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKV 828
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+++ + Y+I W K KE + + R +PS ++E+
Sbjct: 829 TWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEF 888
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 889 HLTVLAYNSKGAGPESE 905
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 110/302 (36%), Gaps = 60/302 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP--------- 61
CEA G P+ T++W + +D YF ++T R P
Sbjct: 57 CEAKGNPEPTFTWTK------------DDNPFYFTDPRIITSNSSGTFRIPNEGHISHFQ 104
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A N+L S ++ P F K PLE E EG + + CNP
Sbjct: 105 GKYRCFASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVE----EGDPIVLPCNPPKGLP 160
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSC---------------- 159
P ++ + + I R + + G+L + V DS Y C
Sbjct: 161 PLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPM 220
Query: 160 --TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 217
T + + + + K RL++ S E ITI L L C A E L W
Sbjct: 221 KLTVNSSNSIKQRKPRLLLPPTESGSES---SITILKGETLLLECFA--EGLPTPQVDWN 275
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G G++ N G L+I N S+ D G Y C + +G + VIVE
Sbjct: 276 KIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTATNFLGTATHDFHVIVEE 329
Query: 278 PP 279
PP
Sbjct: 330 PP 331
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 91 KKRPLESETYAGEGGNVTIF--------CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
K R L T +G ++TI C E P P+ W K G + G K
Sbjct: 234 KPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 293
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTATN G +IV P + ++ P + N L C
Sbjct: 294 TLKIENVSYQDKGNYRCTATNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 352
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 353 EAEGEPQPTIK--WRVNGSPIDN 373
>gi|26333963|dbj|BAC30699.1| unnamed protein product [Mus musculus]
Length = 1150
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 206/479 (43%), Gaps = 33/479 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG + P + F+ ++ L P +YQC A N
Sbjct: 368 CEAEGEPQPTIKWRLNGLPIEKHPFPGD-----FMFPREISFTNLLPNHT-GVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWK-KDGN 128
T ++A + V+ + P K + E YA G + + C A+PK VW+ D
Sbjct: 422 IHGTILANANIDVIDVIPLIKTK--NEENYATVVGYSAFLHCEYFASPKATVVWEVADET 479
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G R ENG L I + +D+G YSC N G L + + + P
Sbjct: 480 HPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG---EAFEMNGTEDGRIVIDGAYLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C ++++ S KT V V G P PG + + E S + W G +
Sbjct: 596 NITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPDPPGNLHLSERQNRSVRLSWEAGDDHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G +E + L P+ Y+F+V A
Sbjct: 656 SKISEYIVEFEGNREEPGKW---------EELTRVQG-EETDVVLSLAPYVRYQFRVTAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G S PS + TP P + P I + ++ I WEPL +QN P + YK+
Sbjct: 706 NEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYKV 765
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E E + V +R+ + Y Y+VKVQAIN +G P+ + VT++
Sbjct: 766 SWKPQGAPEEWEEEI-----VTNHTLRVMTPTVYAPYDVKVQAINQLGSSPDPQPVTLY 819
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 179/497 (36%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P T W + ET PLE DRY +N Y E D Y C N
Sbjct: 461 CEYFASPKATVVW-----EVADETHPLEG-DRYHTHENGTLEIYRTTEEDAGSYSCWVDN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAAPKPKFVW 123
+ +A L + L + P + P E Y C+ K W
Sbjct: 515 AMGKAVITANLDIRNATKLRVSPKNPRIPKSHVLELYCESQ------CDSHLKHSLKLSW 568
Query: 124 KKDGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
KDG G+ R + + L IS ++ +D G+YSC+A K ++ VL P
Sbjct: 569 SKDGEAFEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVP 628
Query: 181 SYYEQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGNMD-LNELETP 234
P + ++ +N +R S H ++ + + N G + L ++
Sbjct: 629 D----PPGNLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQGE 684
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
++ L F E V +S S P P ++V
Sbjct: 685 ETDVVLSLAPYVRYQFRVTAVNE-VGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKE 743
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I+W P YK+ +W E + V +T R V+
Sbjct: 744 MIIKWEPLKSMEQNGPGLEYKV----SWKPQ--GAPEEWEEEIVTNHTLR-------VMT 790
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAP--SRIGGGGGKIGDLSI 405
P ++ Y+ KV A N+LG SSP PQ T D P AP R+ + + +
Sbjct: 791 PTVYAPYDVKVQAINQLG----SSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTL--VKV 844
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E + Y+I W K KE + + R +PS ++E+
Sbjct: 845 TWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEF 904
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 905 HLTVLAYNSKGAGPESE 921
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 74/210 (35%), Gaps = 15/210 (7%)
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C N +K R + L P + L ++T +G + + C E P P W K
Sbjct: 240 CSQANSIKQR------KPKLLLPPAQMGSLSAKTVL-KGDTLLLECFAEGLPTPHIQWSK 292
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G+ + G L I +S D G Y CTA N+ G S + + P +++
Sbjct: 293 PGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTANNLLG-KASHDFHVTVEEPPRWKK 351
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P + + L C A E + W NG+ I P + +
Sbjct: 352 KPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLPIEKHPF-----PGDFMFPREISF 404
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIV 275
TN G Y+C + G I + V
Sbjct: 405 TNLLPNHTGVYQCEASNIHGTILANANIDV 434
>gi|148666973|gb|EDK99389.1| cell adhesion molecule with homology to L1CAM, isoform CRA_b [Mus
musculus]
gi|148666974|gb|EDK99390.1| cell adhesion molecule with homology to L1CAM, isoform CRA_b [Mus
musculus]
Length = 1210
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 206/479 (43%), Gaps = 33/479 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG + P + F+ ++ L P +YQC A N
Sbjct: 353 CEAEGEPQPTIKWRLNGLPIEKHPFPGD-----FMFPREISFTNLLPNHT-GVYQCEASN 406
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWK-KDGN 128
T ++A + V+ + P K + E YA G + + C A+PK VW+ D
Sbjct: 407 IHGTILANANIDVIDVIPLIKTK--NEENYATVVGYSAFLHCEYFASPKATVVWEVADET 464
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G R ENG L I + +D+G YSC N G L + + + P
Sbjct: 465 HPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNA-TKLRVSPK 523
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 524 NPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEA---FEMNGTEDGRIVIDGAYLTIS 580
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C ++++ S KT V V G P PG + + E S + W G +
Sbjct: 581 NITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPDPPGNLHLSERQNRSVRLSWEAGDDHN 640
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G +E + L P+ Y+F+V A
Sbjct: 641 SKISEYIVEFEGNREEPGKW---------EELTRVQG-EETDVVLSLAPYVRYQFRVTAV 690
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G S PS + TP P + P I + ++ I WEPL +QN P + YK+
Sbjct: 691 NEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYKV 750
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E E + V +R+ + Y Y+VKVQAIN +G P+ + VT++
Sbjct: 751 SWKPQGAPEEWEEEI-----VTNHTLRVMTPTVYAPYDVKVQAINQLGSSPDPQPVTLY 804
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 179/497 (36%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P T W + ET PLE DRY +N Y E D Y C N
Sbjct: 446 CEYFASPKATVVW-----EVADETHPLEG-DRYHTHENGTLEIYRTTEEDAGSYSCWVDN 499
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAAPKPKFVW 123
+ +A L + L + P + P E Y C+ K W
Sbjct: 500 AMGKAVITANLDIRNATKLRVSPKNPRIPKSHVLELYCESQ------CDSHLKHSLKLSW 553
Query: 124 KKDGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
KDG G+ R + + L IS ++ +D G+YSC+A K ++ VL P
Sbjct: 554 SKDGEAFEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVP 613
Query: 181 SYYEQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGN-MDLNELETP 234
P + ++ +N +R S H ++ + + N G +L ++
Sbjct: 614 D----PPGNLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQGE 669
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
++ L F E V +S S P P ++V
Sbjct: 670 ETDVVLSLAPYVRYQFRVTAVNE-VGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKE 728
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I+W P YK+ +W E + V +T R V+
Sbjct: 729 MIIKWEPLKSMEQNGPGLEYKV----SWKPQ--GAPEEWEEEIVTNHTLR-------VMT 775
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAP--SRIGGGGGKIGDLSI 405
P ++ Y+ KV A N+LG SSP PQ T D P AP R+ + + +
Sbjct: 776 PTVYAPYDVKVQAINQLG----SSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTL--VKV 829
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E + Y+I W K KE + + R +PS ++E+
Sbjct: 830 TWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEF 889
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 890 HLTVLAYNSKGAGPESE 906
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 113/292 (38%), Gaps = 40/292 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ +SW ++ + P + D R +N T + N Y+C
Sbjct: 58 CEAKGNPEPIFSWTKDDK-------PFDLSDPRIIAANNSGTFKIPNEGHISHFQGKYRC 110
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N+L T S ++ P F K +E EG ++ + CNP P ++ +
Sbjct: 111 FASNRLGTAVSEEIEFIVPGVPKFPKEKIEP-IDVEEGDSIVLPCNPPKGLPPLHIYWMN 169
Query: 127 GNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLHGPS 181
+ I R + + G+L + V +DS Y C A + + + + ++ +
Sbjct: 170 IELEHIEQDERVYMSQRGDLYFANVEENDSRNDYCCFAAFPKLRTIVQKMPMKLTVNSSN 229
Query: 182 YYEQLPPKI-------------TIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMD 227
+Q PK+ T+ L L C A E L +I W+ G +
Sbjct: 230 SIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFA---EGLPTPHIQWSKPGSELPEG- 285
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + L+I N S+ D G Y C + +GK S V VE PP
Sbjct: 286 -----RATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPP 332
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 61/173 (35%), Gaps = 8/173 (4%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+G + + C E P P W K G+ + G L I +S D G Y CTA
Sbjct: 255 KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTAN 314
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N+ G S + + P +++ P + + L C A E + W NG+
Sbjct: 315 NLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLP 371
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I P + + TN G Y+C + G I + V
Sbjct: 372 IEKHPF-----PGDFMFPREISFTNLLPNHTGVYQCEASNIHGTILANANIDV 419
>gi|344248894|gb|EGW04998.1| Contactin-3 [Cricetulus griseus]
Length = 495
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 178/373 (47%), Gaps = 29/373 (7%)
Query: 111 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 170
C PKP + W K+G+ + R +G L I V++ D+G Y+CTA N G
Sbjct: 27 CRASGKPKPSYRWLKNGDALVLEVRISFLNDGGLKILNVTKADAGTYTCTAENQFGKANG 86
Query: 171 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLN 229
L+V P+ P + +A ++ L C + LLD+ + W NG D +
Sbjct: 87 TTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGS 145
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P V+V E
Sbjct: 146 HFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDE 204
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
+ T+A + WT+G + P+ Y + ART ++ W V+ + + +D T R +E
Sbjct: 205 ITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQTVT--TVPEVIDGKT-RTATVVE- 260
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L PW YEF+V+A N++G GEPS PS + T P APS + GGGG +L I+W+
Sbjct: 261 -LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITWDV 319
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQA 467
+W + E S+ +K GN V++ + S YYT V+A
Sbjct: 320 R--------------YWNNGGEEESSSK-MKVAGNQTSTVLQGLKSNLAYYT----AVRA 360
Query: 468 INDVGPGPESEVV 480
N G GP S V
Sbjct: 361 YNSAGAGPFSATV 373
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 171/486 (35%), Gaps = 48/486 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L E F+ D L I + + D Y C
Sbjct: 23 LYWECRASGKPKPSYRWLKNGDALVLEV------RISFLNDGGLKILNVT-KADAGTYTC 75
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWK 124
A+NQ + L V+T P + GE +V + C + P F W
Sbjct: 76 TAENQFGKANGTTHL-VVTEPTRIILAPSNMDVAVGE--SVILPCQVQHDPLLDIMFAWY 132
Query: 125 KDGNIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+G + FE +G+L+I + SG Y C S LIV
Sbjct: 133 FNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRG 192
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNI 236
P E + K+ QL + T+ V + +G + + P +
Sbjct: 193 SPGPPENV--KVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQTVTTV--PEV 248
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
IDG T EYE V + I G P LP + V + +
Sbjct: 249 -IDGKTRTATVVELNPWVEYEFRV--------VASNKIGGGEPSLPS--EKVRTEEAAPE 297
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ ++ + G + I W+ ++N + G + +++ L
Sbjct: 298 VAPSEVSGGGGSRSELVI----TWDVRYWNNGGEEESSSKMKVAGNQTSTVLQGLKSNLA 353
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y V A N G G P S + T P Q P + L ++WE + +
Sbjct: 354 YYTAVRAYNSAGAG-PFSATVNATTKKTPPSQPPGNVIWNATDTKVL-LNWEQVKAMENE 411
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
+ YK+F+R + Q N A + +P + +Y ++V+A D G G
Sbjct: 412 SEVTGYKVFYRTSSQNSVQVLNT----NKTSAELLLPIK---EDYIIEVKATTDGGDGTS 464
Query: 477 SEVVTI 482
SE + I
Sbjct: 465 SEQIRI 470
>gi|296225704|ref|XP_002758612.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Callithrix jacchus]
Length = 1209
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--VSFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + ++ ++P + + E YA G + + C A+P+ W+K
Sbjct: 406 VHGTILANANINIVDVRPLIQTE--DEENYATVVGYSAFLHCEFFASPEAIVSWQKVEEA 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENSIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
I L+L +C AH + L ++ W+ +G ++N E I IDG L
Sbjct: 523 NPRIPKLHMLELHCESKCDAHLKHSLKLS--WSKDGEA---FEINGTEDGRIIIDGANLT 577
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + D G Y C + + + T V V P P + + E S + W G
Sbjct: 578 ISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDD 637
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
+ I+ Y + N E +E+ R G+K I L P+ Y+F+VIA
Sbjct: 638 HNSNISEYIVEFEGN-------KEEPGRWEELTRVQGKKTTVIL-PLAPFVRYQFRVIAM 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 803
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 445 CEFFASPEAIVSWQKV-----EEAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 499 SIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDAHLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS ++ +D GIY C+A ++ VL P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 672
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 673 ILPL--APFVRY-QFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 729
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 730 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 775 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 830
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 831 STIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLKFSGQRNSGMVPSLDAFSEFHL 890
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 891 TVLAYNSKGAGPESE 905
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 109/302 (36%), Gaps = 60/302 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP--------- 61
CEA G P+ ++W ++ D YF ++T R P
Sbjct: 57 CEAKGNPEPIFTWTKD------------DNPFYFTDPRIITSNNSGTFRIPNEGHISHFQ 104
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A N+L S ++ P F K PLE E EG + + CNP
Sbjct: 105 GKYRCFASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVE----EGDPIVLPCNPPKGLP 160
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSC---------------- 159
P ++ + + I R + + G+L + V DS Y C
Sbjct: 161 PLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPM 220
Query: 160 --TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 217
T + + + + K RL++ S E ITI L L C A E L W
Sbjct: 221 KLTVNSSNSIKQRKPRLLLPPTESGSES---SITILKGETLLLECFA--EGLPTPQVDWN 275
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G G++ N G L+I N S+ D G Y C + +G + VIVE
Sbjct: 276 KIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEE 329
Query: 278 PP 279
PP
Sbjct: 330 PP 331
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 91 KKRPLESETYAGEGGNVTIF--------CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
K R L T +G ++TI C E P P+ W K G + G K
Sbjct: 234 KPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 293
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 294 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 352
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 353 EAEGEPQPTIK--WRVNGSPIDN 373
>gi|110347545|ref|NP_031723.2| neural cell adhesion molecule L1-like protein precursor [Mus
musculus]
gi|408360031|sp|P70232.2|CHL1_MOUSE RecName: Full=Neural cell adhesion molecule L1-like protein;
AltName: Full=Cell adhesion molecule with homology to
L1CAM; AltName: Full=Chl1-like protein; AltName:
Full=Close homolog of L1; Contains: RecName:
Full=Processed neural cell adhesion molecule L1-like
protein; Flags: Precursor
gi|124297745|gb|AAI31672.1| Cell adhesion molecule with homology to L1CAM [Mus musculus]
gi|124297981|gb|AAI31671.1| Cell adhesion molecule with homology to L1CAM [Mus musculus]
gi|148666972|gb|EDK99388.1| cell adhesion molecule with homology to L1CAM, isoform CRA_a [Mus
musculus]
Length = 1209
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 206/479 (43%), Gaps = 33/479 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG + P + F+ ++ L P +YQC A N
Sbjct: 352 CEAEGEPQPTIKWRLNGLPIEKHPFPGD-----FMFPREISFTNLLPNHT-GVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWK-KDGN 128
T ++A + V+ + P K + E YA G + + C A+PK VW+ D
Sbjct: 406 IHGTILANANIDVIDVIPLIKTK--NEENYATVVGYSAFLHCEYFASPKATVVWEVADET 463
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G R ENG L I + +D+G YSC N G L + + + P
Sbjct: 464 HPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEA---FEMNGTEDGRIVIDGAYLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C ++++ S KT V V G P PG + + E S + W G +
Sbjct: 580 NITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPDPPGNLHLSERQNRSVRLSWEAGDDHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G +E + L P+ Y+F+V A
Sbjct: 640 SKISEYIVEFEGNREEPGKW---------EELTRVQG-EETDVVLSLAPYVRYQFRVTAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G S PS + TP P + P I + ++ I WEPL +QN P + YK+
Sbjct: 690 NEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYKV 749
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E E + V +R+ + Y Y+VKVQAIN +G P+ + VT++
Sbjct: 750 SWKPQGAPEEWEEEI-----VTNHTLRVMTPTVYAPYDVKVQAINQLGSSPDPQPVTLY 803
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 179/497 (36%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P T W + ET PLE DRY +N Y E D Y C N
Sbjct: 445 CEYFASPKATVVW-----EVADETHPLEG-DRYHTHENGTLEIYRTTEEDAGSYSCWVDN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAAPKPKFVW 123
+ +A L + L + P + P E Y C+ K W
Sbjct: 499 AMGKAVITANLDIRNATKLRVSPKNPRIPKSHVLELYCESQ------CDSHLKHSLKLSW 552
Query: 124 KKDGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
KDG G+ R + + L IS ++ +D G+YSC+A K ++ VL P
Sbjct: 553 SKDGEAFEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVP 612
Query: 181 SYYEQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGN-MDLNELETP 234
P + ++ +N +R S H ++ + + N G +L ++
Sbjct: 613 D----PPGNLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQGE 668
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
++ L F E V +S S P P ++V
Sbjct: 669 ETDVVLSLAPYVRYQFRVTAVNE-VGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKE 727
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I+W P YK+ +W E + V +T R V+
Sbjct: 728 MIIKWEPLKSMEQNGPGLEYKV----SWKPQ--GAPEEWEEEIVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAP--SRIGGGGGKIGDLSI 405
P ++ Y+ KV A N+LG SSP PQ T D P AP R+ + + +
Sbjct: 775 PTVYAPYDVKVQAINQLG----SSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTL--VKV 828
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E + Y+I W K KE + + R +PS ++E+
Sbjct: 829 TWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEF 888
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 889 HLTVLAYNSKGAGPESE 905
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 113/292 (38%), Gaps = 40/292 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ +SW ++ + P + D R +N T + N Y+C
Sbjct: 57 CEAKGNPEPIFSWTKDDK-------PFDLSDPRIIAANNSGTFKIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N+L T S ++ P F K +E EG ++ + CNP P ++ +
Sbjct: 110 FASNRLGTAVSEEIEFIVPGVPKFPKEKIEP-IDVEEGDSIVLPCNPPKGLPPLHIYWMN 168
Query: 127 GNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLHGPS 181
+ I R + + G+L + V +DS Y C A + + + + ++ +
Sbjct: 169 IELEHIEQDERVYMSQRGDLYFANVEENDSRNDYCCFAAFPKLRTIVQKMPMKLTVNSSN 228
Query: 182 YYEQLPPKI-------------TIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMD 227
+Q PK+ T+ L L C A E L +I W+ G +
Sbjct: 229 SIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFA---EGLPTPHIQWSKPGSELPEG- 284
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + L+I N S+ D G Y C + +GK S V VE PP
Sbjct: 285 -----RATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPP 331
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 61/173 (35%), Gaps = 8/173 (4%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+G + + C E P P W K G+ + G L I +S D G Y CTA
Sbjct: 254 KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTAN 313
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N+ G S + + P +++ P + + L C A E + W NG+
Sbjct: 314 NLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLP 370
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I P + + TN G Y+C + G I + V
Sbjct: 371 IEKHPF-----PGDFMFPREISFTNLLPNHTGVYQCEASNIHGTILANANIDV 418
>gi|149036850|gb|EDL91468.1| contactin 4, isoform CRA_c [Rattus norvegicus]
Length = 586
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 164/374 (43%), Gaps = 68/374 (18%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL ++R I+ L I +N D MYQC A
Sbjct: 269 WECKANGRPKPTYRWLKNGD-------PLLTRERIQIEQGTLNITIVNLS-DAGMYQCVA 320
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ Y+SA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 321 ENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 380
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +V+ P+ P
Sbjct: 381 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPS 439
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 440 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 499
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV P + DG T
Sbjct: 500 IQLKHAGKYVCMVQTSVDKLSAAADLIVRVP-------------------ELVDGKT--- 537
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
+ V+G L PW YEF+ +A N +
Sbjct: 538 -------------------FTATVVG-----------------LNPWVEYEFRTVAANVI 561
Query: 368 GYGEPSSPSPQYNT 381
G GEPS PS + T
Sbjct: 562 GIGEPSRPSEKRRT 575
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 122/309 (39%), Gaps = 57/309 (18%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDSGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKR-------------------PLESETYAGE------ 103
N T S A+L+ L+ +FK R P S GE
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTRTRSTVSVRRGQGMVLLCGPPPHSGGVMGEYEPKIE 162
Query: 104 -----------GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSR 151
G V + C P P +W++ DG I RR +G L I +
Sbjct: 163 VQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SSGILEIPNFQQ 221
Query: 152 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 211
+D+G Y C A N G + +KG++ P++ Q+ I +A ++ C A+
Sbjct: 222 EDAGSYECVAENSRGKNIAKGQVTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--K 278
Query: 212 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--ST 269
Y W NG + L I I+ G L IT + +DAG Y+CV ++ G I S
Sbjct: 279 PTYRWLKNGDPL-------LTRERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIYASA 331
Query: 270 KTTVIVEGP 278
+ +VI E P
Sbjct: 332 ELSVIAESP 340
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 102/264 (38%), Gaps = 41/264 (15%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 VFVQEPSHVMFPLDSEEK-----KVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P DSG Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS---------AHTEELLDVAYIWTHNGVRIGNMDLNELE----TPNI---NIDG--- 240
L C E ++V + T + + L P I DG
Sbjct: 142 LLCGPPPHSGGVMGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPI 201
Query: 241 ----------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-E 289
G+LEI N DAG YECV +++ GK K V P VQ++ +
Sbjct: 202 ARKARRHKSSGILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNW---VQIIND 258
Query: 290 VHKTSATIQWTDGATNGRPITHYK 313
+H + + NGRP Y+
Sbjct: 259 IHVAMEESVFWECKANGRPKPTYR 282
>gi|403309235|ref|XP_003945024.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Saimiri boliviensis boliviensis]
Length = 1225
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 220/482 (45%), Gaps = 39/482 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P +YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-GVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + ++ ++P + + E YA G + + C A+P+ W+K
Sbjct: 422 VHGTILANANINIVDVRPLIQTE--DEENYATVVGYSAFLHCKFFASPEAIVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENSIGKTAVTANLDIRNA-TKLRVSPK 538
Query: 189 KITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
I L+L +C AH + L ++ W+ +G ++N E I IDG L
Sbjct: 539 NPRIPKLHMLELHCESKCDAHLKHSLKLS--WSKDGEA---FEINGTEDGRIIIDGANLT 593
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + D G Y C + + + T V V P P + + E S + W G
Sbjct: 594 ISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDD 653
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ I+ Y + F ++ +G+ E+ R G+K I L P+ Y+F+VI
Sbjct: 654 HNSNISEYIV---------EFEGNKEELGRWEELTRVQGKKTTVIL-PLAPFVRYQFRVI 703
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y
Sbjct: 704 AMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEY 763
Query: 423 KIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
++ W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT
Sbjct: 764 RVTWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVT 817
Query: 482 IW 483
++
Sbjct: 818 LY 819
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 189/497 (38%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ F P+ SW + E PLE + RY I +N E D Y C +N
Sbjct: 461 CKFFASPEAIVSWQKV-----EEAKPLEGR-RYHIYENGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 515 SIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDAHLKHSLKLSWSK 570
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS ++ +D GIY C+A ++ VL P
Sbjct: 571 DGEAFEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDVPDP 630
Query: 183 YEQLPPKITIAAHRNLQLRCSA---HTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
E L ++ +R+++L A H + + + N +G + E +
Sbjct: 631 PENL--HLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEELGRWE----ELTRVQGK 684
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTS 294
+ + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 685 KTTVILPLAPFVRY-QFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKE 743
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENV 350
I+W P Y++ TW V +E V +T R V
Sbjct: 744 MIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------V 788
Query: 351 LVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSI 405
+ P ++ Y+ KV A N+LG G P PQ T D P AP G + +
Sbjct: 789 MTPAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKV 844
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+++ + Y+I W K KE + + R +PS ++E+
Sbjct: 845 TWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEF 904
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 905 HLTVLAYNSKGAGPESE 921
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 110/315 (34%), Gaps = 70/315 (22%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP--------- 61
CEA G P+ T++W + +D YF ++T R P
Sbjct: 57 CEAKGNPEPTFTWTK------------DDNPFYFTDPRIITSNSSGTFRIPNEGHISHFQ 104
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A N+L S ++ P F K PLE E EG + + CNP
Sbjct: 105 GKYRCFASNKLGIAMSEEIEFIVPSVPKFPKENIDPLEVE----EGDPIVLPCNPPKGLP 160
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA-------------- 161
P ++ + + I R + + G+L + V DS Y C A
Sbjct: 161 PLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPM 220
Query: 162 -----TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSA 204
+ H D S I S ++ LPP ITI L L C A
Sbjct: 221 KLTVNSLKHANDSSSSTEIGSKANSIKQRKPRLLLPPTESGSESSITILKGETLLLECFA 280
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
E L W G G++ N G L+I N S+ D G Y C + +
Sbjct: 281 --EGLPTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTATNFL 332
Query: 265 GKISTKTTVIVEGPP 279
G + VIVE PP
Sbjct: 333 GTATHDFHVIVEEPP 347
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 91 KKRPLESETYAGEGGNVTIF--------CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
K R L T +G ++TI C E P P+ W K G + G K
Sbjct: 250 KPRLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTATN G +IV P + ++ P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTATNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPIDN 389
>gi|410925447|ref|XP_003976192.1| PREDICTED: neurofascin-like [Takifugu rubripes]
Length = 1510
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 207/477 (43%), Gaps = 40/477 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P W NG+ + ET P + R + D ++ R + A+YQC A N
Sbjct: 517 CRANGNPKPNIQWLINGQPI--ETSP-PNPGRQVLGDTII-FRSVQ-MGSSAVYQCNASN 571
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
Q ++A + VL + P P E + + C +P P W K+G
Sbjct: 572 QYGYLLANAFISVLDMPPRMLG-PKNQLIKVIENTHTFLDCPFFGSPLPDLRWFKNGQGS 630
Query: 131 G-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
G GG + NG L I +D G Y+C A N+ G E++ RL V +P
Sbjct: 631 GVDGGHYTVHNNGTLEIKRARAEDEGTYTCVANNLLGKAENQVRLEVKEATRII-GVPQH 689
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITN 247
+ + +C ++ L V WT + + +G + D LL I+
Sbjct: 690 QSAVRGSTARFKCQVKSDPSLPVTVTWTKDDKPLNVGW---------RLRKDEDLLSISA 740
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
+ D G Y C VKS + S + V G P P + + + S + W G +
Sbjct: 741 VNEGDEGMYTCTVKSEIDADSASARLTVLGCPDPPVELDLSDPAARSVRLTWIPGNEHRS 800
Query: 308 PITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+TH+ + W W N+S Y G + I L P+ Y+F+VIA N
Sbjct: 801 PVTHFLVQFEEDRWEPGQWRNMSS---------YPGHLNSVILQ-LAPFVNYQFRVIAIN 850
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
+G EPS+PSPQY T P P + G G ++ I+WEPL ++N N+ Y ++
Sbjct: 851 SVGQSEPSTPSPQYKTSGAAPDVIPRGLRGWGSMKDNMEITWEPLLDLERNGANLIYSLW 910
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
WR+K+ +E ++ NV A + + S Y YE+K+QA N+ G GP S VV
Sbjct: 911 WRRKDMSE-------DWNNVTTAGNKHMVHSTETYVPYEIKIQAGNEFGSGPVSNVV 960
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 122/336 (36%), Gaps = 40/336 (11%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G T+SW RNG+ N P + + R PE
Sbjct: 212 VDPRDNIIIECEAKGNTLPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRRGGRPEDY 271
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
YQC A N+L S+ L ++ P + K L+ EG + + CNP P
Sbjct: 272 EGEYQCFANNELGVALSNKILLRVSKAPLWPKEVLDP-VLVNEGSPLILPCNPPPGLPPP 330
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA----------TNVHGM 167
++ D + I R + NG+L S V ++D Y C A N +
Sbjct: 331 LIFWMDNTMTPIVQDKRVSMGLNGDLYFSNVMTKDALNEYKCNARCRLTQTIQQKNPFIL 390
Query: 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
R + P+ + + + R +L L + W G G++
Sbjct: 391 KVQTSRKLPQSMPTLLSPVGSQSSKMVLRGQELLLECIAAGLPTPSIKWYRKG---GDLP 447
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
+++ N N L + S DAGEY C+ + +G + V V+ P
Sbjct: 448 ERKVKFENFN---KTLVVMGVSEEDAGEYVCMANNHLGSVRHSILVQVKAAP-------- 496
Query: 288 VEVHKTSATIQWTDGATN--GRPITHYKIIARTNWN 321
W D TN P H +++ R N N
Sbjct: 497 ----------YWLDKPTNLVLAPDEHGRLVCRANGN 522
>gi|432092484|gb|ELK25099.1| Neural cell adhesion molecule L1-like protein [Myotis davidii]
Length = 1190
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 212/483 (43%), Gaps = 43/483 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV----LTIRYLNPERDPAMYQC 66
CEA G P+ W NG +P+E+ F D V ++ L P A+YQC
Sbjct: 352 CEAEGEPEPVIRWRVNG-------IPIEENP--FAGDVVSPGEVSFTDLQPNHT-AVYQC 401
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKK 125
A N T ++A + V+ ++P + + E+YA G + + C A+P+ W+K
Sbjct: 402 EASNAHGTILANANVDVVDVRPLIETE--DEESYAAVAGSSAFLLCEFFASPQAMVSWQK 459
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
D G R + NG L I + +D+G YSC N G L + + + +
Sbjct: 460 ADAARPLEGPRYHVHTNGTLQIREATVEDAGAYSCWVENAQGKTAVTASLDIRNA-TRLQ 518
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
P + L+L C + + L + W+ G + N E I IDG
Sbjct: 519 VSPRDPRVPRSHTLELHCESECDPHLKPSLRLTWSKGG---AAFETNGTEDGRILIDGAH 575
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I+N + D G Y C + + + +T V V P P +++ E S + W G
Sbjct: 576 LTISNLTLEDQGVYTCSAHTALDSAANETHVTVLDVPDPPENLRLSERQNRSVRLTWDAG 635
Query: 303 ATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
++ I+ Y + N W ++ G E ++ L P+ Y+F+
Sbjct: 636 DSHNSNISGYVVEFEGNREEPGRWEQLAAVPGG----------ETTVLLTLAPYVRYQFR 685
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA NE+G PS PS + TP P + P + + ++ I WEPL +QN P +
Sbjct: 686 VIAANEVGRSRPSRPSEHHETPPAAPDKNPQNVRVQASQPKEMVIRWEPLKSTEQNGPGL 745
Query: 421 YYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y++ W+ E++ ET++E+ +R+ + Y YEV+VQA+N +G GP+ +
Sbjct: 746 EYRVAWKPLGALGEWEEETVREHS------LRVMTPAIYAPYEVQVQALNHLGAGPQPQS 799
Query: 480 VTI 482
V +
Sbjct: 800 VVL 802
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 109/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNPERDPAM---YQC 66
CEA G P+ ++W ++G+ P + D R +N T R N + Y+C
Sbjct: 57 CEAKGNPEPRFTWTKDGK-------PFDLSDPRVIASNNSGTFRIPNEGQIAHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGVAMSEEIEFIVPNVPKFPKEKIEPLEVE----EGDPLVLPCNPPTGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT---------------NVH 165
+ + I R + + G+L + V DS Y C A V+
Sbjct: 166 WMNIELEHIQQDERVYMSQEGDLYFANVEEHDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ K R L P +T+ L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPSLLLPPVARGPESAVTVLRGDTLVLECFA--EGLPTPQVGWEKVG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G +L+I N S+ D G Y C + +G + V VE PP
Sbjct: 281 LPKGRETKENY---GKMLKIENVSYEDKGNYRCTANNFLGVATHDFHVTVEEPP 331
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 82/224 (36%), Gaps = 27/224 (12%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
++ P + N +K R S L P + P ES G + + C E P
Sbjct: 216 QKMPMKLTVNSSNSIKQRKPS------LLLPPVARGP-ESAVTVLRGDTLVLECFAEGLP 268
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
P+ W+K G + G K L I VS +D G Y CTA N G+ + V
Sbjct: 269 TPQVGWEKVGGDLPKGRETKENYGKMLKIENVSYEDKGNYRCTANNFLGVATHDFHVTVE 328
Query: 178 HGPSYYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P + ++ P+ + + R+ L C A E + W NG+ I E P
Sbjct: 329 EPPRWTKK--PQSGVYSTRSSGILLCEAEGEP--EPVIRWRVNGIPIE-------ENP-- 375
Query: 237 NIDGGLLEITNASFAD-----AGEYECVVKSTVGKISTKTTVIV 275
G ++ SF D Y+C + G I V V
Sbjct: 376 -FAGDVVSPGEVSFTDLQPNHTAVYQCEASNAHGTILANANVDV 418
>gi|431916529|gb|ELK16507.1| Contactin-5, partial [Pteropus alecto]
Length = 713
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 166/347 (47%), Gaps = 10/347 (2%)
Query: 138 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 197
I +G+L I S+ D G Y C NV G E + V P+ E P + + +
Sbjct: 3 ILPDGSLRILNASKSDEGKYVCQGENVFGSAEIIASVSVKE-PTRIELTPKRTELTVGES 61
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 256
+ L C A + LDV + WT G I + E+ L I N AG Y
Sbjct: 62 IVLNCKAIHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLVHAGRY 121
Query: 257 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 316
C V++T +S + ++V GPPG PG V V E+ +++AT+ W+ A N P++ Y + A
Sbjct: 122 GCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAADNHSPVSSYNLQA 181
Query: 317 RTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 375
R+ ++ W V K V + TG E+++ L PW YEF+V+A N +G G+PS+P
Sbjct: 182 RSPFSLGWQTV------KTVPEIITGDMESAMAVDLNPWVEYEFRVVAANPIGTGDPSTP 235
Query: 376 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 435
S T P AP+ + G G+ +L I+WEP+ E QN Y + +R N T
Sbjct: 236 SRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGW 294
Query: 436 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
E + + R S T +EVKV N+ G GP S++V I
Sbjct: 295 KEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVI 341
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F V A N GYG PSS T P QAPS + + LS+ WEP+
Sbjct: 573 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQ-QGSQLSLGWEPVKPLANE 630
Query: 417 APNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G G
Sbjct: 631 SEVMGYKVFYRQEGHSNNQVIETQKPQ-----AVVPLPDAGVYI---IEVRAYSEGGDGM 682
Query: 476 ESEVVTI 482
S + +
Sbjct: 683 ASSQIRV 689
>gi|402895019|ref|XP_003910635.1| PREDICTED: contactin-5-like, partial [Papio anubis]
Length = 573
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 167/350 (47%), Gaps = 16/350 (4%)
Query: 138 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 197
I +G+L I S+ D G Y C NV G E L V P+ E P + + +
Sbjct: 3 ILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGES 61
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNINIDGGLLEITNASFADA 253
+ L C A + LDV + WT G I D E E+ L I N A
Sbjct: 62 IVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRAQASSADLMIRNILLMHA 118
Query: 254 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 313
G Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W+ A N PI+ Y
Sbjct: 119 GRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAADNHSPISSYN 178
Query: 314 IIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 372
+ AR+ ++ W V K V + TG E+++ L PW YEF+V+A N +G G+P
Sbjct: 179 LQARSPFSLGWQTV------KTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDP 232
Query: 373 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 432
S+PS T P AP+ + G G+ +L I+WEP+ E QN Y + +R N T
Sbjct: 233 STPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGT 291
Query: 433 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
E + + R S T +EVKV N+ G GP S++V I
Sbjct: 292 RGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVI 341
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 419 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 474
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 475 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 526
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 527 GTASSQIRV 535
>gi|347964368|ref|XP_003437079.1| AGAP000720-PB [Anopheles gambiae str. PEST]
gi|333467499|gb|EGK96582.1| AGAP000720-PB [Anopheles gambiae str. PEST]
Length = 1271
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 200/465 (43%), Gaps = 26/465 (5%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
+ CEA G P W NG+ ++ + R + + + I L + D Y C A
Sbjct: 366 FKCEAAGNPKPNIMWIHNGKQIDVS----QGNARRIVGSSSIYISKLQ-KSDTGNYGCNA 420
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N L Y L VL L P P + + NVT+ C APKP+ W ++
Sbjct: 421 TNSLGYVYKDVYLNVLALAPEITDPP--KREFTVDQRNVTMTCRVFGAPKPQVKWLRNDR 478
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ +GGR + +G+L I V DD+G Y+C A N G + G LIV + P
Sbjct: 479 EL-TGGRYQTMPSGDLFIRDVKFDDAGEYTCHAVNNLGSKSASGELIVKER-TVINDPPQ 536
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
A + RC+A + L++ W G I D E + I L I+
Sbjct: 537 DYEAEAGTTVTFRCNAIADSSLELTIEWLTKGEII---DF-ENQPRFIRTSDNSLMISKT 592
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
D G Y C+ ++ + ++ T+ V P P + V A I+W N P
Sbjct: 593 IELDTGTYTCLARTDLDEVMANATLTVMDRPN-PPTLTRVNCKGKVAQIEWISNGDNRSP 651
Query: 309 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 368
I +Y I T++ ++V D G A N PW+ Y F+VIA N++G
Sbjct: 652 ILNYIIEYNTSFTPDTYDVLS-------DDVPGTDFAWTVNT-TPWNNYTFRVIAVNKVG 703
Query: 369 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 428
PS S T + PY+ P + G G +L I W PL + NAP ++Y+++WR+
Sbjct: 704 RSLPSGHSDVCTTESSVPYKNPDNLEGEGTTPTNLVIKWRPLAQVDHNAPGLHYRVYWRR 763
Query: 429 K-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
E+ S ++++ V +P+ +T Y VKV A+ND G
Sbjct: 764 DIPGAEWNSADVRDWRQSSYTVEGLPT---FTRYSVKVVALNDRG 805
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 118/281 (41%), Gaps = 34/281 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P Y W +NG+ +T DR Q T+ +P + D YQC A+
Sbjct: 68 CEAEGEPTPKYRWIKNGKKFEWQTY----DDRMSQQPGRGTLVITSPRDEDLGQYQCFAE 123
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW---KK 125
N+ T S++ SFK ++ A EG + C P+ PKP W
Sbjct: 124 NEHGTATSNSVFVRKAELNSFKDGSPQT-LQADEGKPFKLVCQPPDGWPKPNVYWMIQNM 182
Query: 126 DGNIIGSGGRRKIFE-NGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH--- 178
DG I R + GNL S V+RDD Y+C A++V + G ++L
Sbjct: 183 DGGIRSINNSRMTLDPEGNLWFSNVTRDDESNDFFYACAASSVFRSEYKIGNRVLLQVKQ 242
Query: 179 -GPSYYE-QLPPKITIAAHRN--------LQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
G S + + PP+ + +N ++L C L + +WT NG I D
Sbjct: 243 TGISAAQNRHPPQRQYVSRKNEVALKGKQIELFCIYGGTPLPET--VWTKNGRAIVWND- 299
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
+++ N G L+I S DAG Y C V + VG+ +
Sbjct: 300 -KIQQDNY---GKSLKIRRVSSEDAGTYTCEVSNGVGQADS 336
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGN 106
E + Y C A + ++ Y +L +K P ++ A +G
Sbjct: 212 ESNDFFYACAASSVFRSEYKIGNRVLLQVKQTGISAAQNRHPPQRQYVSRKNEVALKGKQ 271
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVH 165
+ +FC P P+ VW K+G I + + G +L I VS +D+G Y+C +N
Sbjct: 272 IELFCIYGGTPLPETVWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGV 331
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
G +S + ++ Y+ P + A + +C A ++ +W HNG +I
Sbjct: 332 GQADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFKCEAAGNPKPNI--MWIHNGKQI-- 387
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
D+++ I + + I+ +D G Y C +++G +
Sbjct: 388 -DVSQGNARRI-VGSSSIYISKLQKSDTGNYGCNATNSLGYV 427
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNS---ETLPLEDQDRYFIQDNVLTIRYLNPER 59
+Q ++T TC FG P W RN L +T+P D FI+D +++
Sbjct: 453 DQRNVTMTCRVFGAPKPQVKWLRNDRELTGGRYQTMPSGD---LFIRD----VKF----D 501
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D Y C A N L ++ +S +L ++ + P + E AG VT CN A
Sbjct: 502 DAGEYTCHAVNNLGSKSASGEL-IVKERTVINDPPQDYEAEAGT--TVTFRCNAIADSSL 558
Query: 120 KFV--WKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
+ W G II + + + +L+IS D+G Y+C A + L
Sbjct: 559 ELTIEWLTKGEIIDFENQPRFIRTSDNSLMISKTIELDTGTYTCLARTDLDEVMANATLT 618
Query: 176 VLHGPSYYEQLPPKIT 191
V+ P+ PP +T
Sbjct: 619 VMDRPN-----PPTLT 629
>gi|355759126|gb|EHH61574.1| hypothetical protein EGM_19511 [Macaca fascicularis]
Length = 1226
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 215/480 (44%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 369 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 422
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T +SA + V+ ++P + + + E YA G + + C A+P+ W+K
Sbjct: 423 VHGTILASANVDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEA 480
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR +++NG L I+ + +D+G YSC N G L + + + P
Sbjct: 481 KPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPK 539
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 540 NPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 596
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W G +
Sbjct: 597 NVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHN 656
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 657 SNISEYIVEFEGNKEDPGRW---------EELTRVQGKKTTVIL-PLAPFVRYQFRVIAV 706
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 707 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 766
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP + VT++
Sbjct: 767 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPAPQSVTLY 820
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 188/496 (37%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY + DN E D Y C +N
Sbjct: 462 CEFFASPEAVVSWQKV-----EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVEN 515
Query: 71 QLKTRYSSA--------QLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+ +A QLRV P K LE + C+ K
Sbjct: 516 AIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESK--------CDLHLKHSLKL 567
Query: 122 VWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG I G+ R I + NL IS V+ +D GIY C+A ++ VL
Sbjct: 568 SWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 627
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNIN 237
P E L ++ +R+++L A + +++ YI G + EL
Sbjct: 628 VPDPPENL--HLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGK 685
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHK 292
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 686 KTTVILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 742
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIE 348
I+W P Y++ TW V +E V +T R
Sbjct: 743 KEMIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR------ 788
Query: 349 NVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
V+ P ++ Y+ KV A N+LG G P+ S + D P AP G + ++
Sbjct: 789 -VMTPAVYAPYDVKVQAINQLGSG-PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVT 846
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYE 462
W +P+++ + Y+I W K KE + + R +PS ++E+
Sbjct: 847 WSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFH 906
Query: 463 VKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 907 LTVLAYNSKGAGPESE 922
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 251 KPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 310
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 311 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 369
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 370 EAEGEPQPTIK--WRVNGSPIDN 390
>gi|402859569|ref|XP_003894225.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Papio anubis]
Length = 1209
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 215/480 (44%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T +SA + V+ ++P + + + E YA G + + C A+P+ W+K
Sbjct: 406 VHGTILASANVDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEA 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR +++NG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W G +
Sbjct: 580 NVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 640 SNISEYIVEFEGNKEDPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP + VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPAPQSVTLY 803
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 189/499 (37%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY + DN E D Y C +N
Sbjct: 445 CEFFASPEAVVSWQKV-----EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVEN 498
Query: 71 QLKTRYSSA--------QLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+ +A QLRV P K LE + C+ K
Sbjct: 499 AIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESK--------CDLHLKHSLKL 550
Query: 122 VWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG I G+ R I + NL IS V+ +D GIY C+A ++ VL
Sbjct: 551 SWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 610
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNIN 237
P E L ++ +R+++L A + +++ YI G + EL
Sbjct: 611 VPDPPENL--HLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGK 668
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHK 292
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 669 KTTVILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 725
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIE 348
I+W P Y++ TW V +E V +T R
Sbjct: 726 KEMIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR------ 771
Query: 349 NVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDL 403
V+ P ++ Y+ KV A N+LG G P+PQ T D P AP G +
Sbjct: 772 -VMTPAVYAPYDVKVQAINQLGSG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLV 826
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYT 459
++W +P+++ + Y+I W K KE + + R +PS ++
Sbjct: 827 KVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFS 886
Query: 460 EYEVKVQAINDVGPGPESE 478
E+ + V A N G GPESE
Sbjct: 887 EFHLTVLAYNSKGAGPESE 905
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 111/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T++W ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFTWTKDGN-------PFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPKLLLPPTESGSESSITILKGETLLLECFA--EGLPTPQVDWNKIG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 LPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 234 KPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 293
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 294 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 352
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 353 EAEGEPQPTIK--WRVNGSPIDN 373
>gi|402859573|ref|XP_003894227.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Papio anubis]
Length = 1171
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 215/480 (44%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T +SA + V+ ++P + + + E YA G + + C A+P+ W+K
Sbjct: 422 VHGTILASANVDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR +++NG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W G +
Sbjct: 596 NVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEDPGRW---------EELTRVQGKKTTVIL-PLAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPAPQSVTLY 819
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 189/499 (37%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY + DN E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSA--------QLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+ +A QLRV P K LE + C+ K
Sbjct: 515 AIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESK--------CDLHLKHSLKL 566
Query: 122 VWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG I G+ R I + NL IS V+ +D GIY C+A ++ VL
Sbjct: 567 SWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 626
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNIN 237
P E L ++ +R+++L A + +++ YI G + EL
Sbjct: 627 VPDPPENL--HLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGK 684
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHK 292
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 685 KTTVILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIE 348
I+W P Y++ TW V +E V +T R
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR------ 787
Query: 349 NVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDL 403
V+ P ++ Y+ KV A N+LG G P+PQ T D P AP G +
Sbjct: 788 -VMTPAVYAPYDVKVQAINQLGSG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLV 842
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYT 459
++W +P+++ + Y+I W K KE + + R +PS ++
Sbjct: 843 KVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFS 902
Query: 460 EYEVKVQAINDVGPGPESE 478
E+ + V A N G GPESE
Sbjct: 903 EFHLTVLAYNSKGAGPESE 921
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T++W ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFTWTKDGN-------PFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 250 KPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPIDN 389
>gi|380808946|gb|AFE76348.1| neural cell adhesion molecule L1-like protein precursor [Macaca
mulatta]
Length = 1225
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 215/480 (44%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T +SA + V+ ++P + + + E YA G + + C A+P+ W+K
Sbjct: 422 VHGTILASANVDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR +++NG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W G +
Sbjct: 596 NVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEDPGRW---------EELTRVQGKKTTVIL-PLAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPAPQSVTLY 819
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 189/499 (37%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY + DN E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSA--------QLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+ +A QLRV P K LE + C+ K
Sbjct: 515 AIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESK--------CDLHLKHSLKL 566
Query: 122 VWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG I G+ R I + NL IS V+ +D GIY C+A ++ VL
Sbjct: 567 SWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 626
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNIN 237
P E L ++ +R+++L A + +++ YI G + EL
Sbjct: 627 VPDPPENL--HLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGK 684
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHK 292
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 685 KTTVILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIE 348
I+W P Y++ TW V +E V +T R
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR------ 787
Query: 349 NVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDL 403
V+ P ++ Y+ KV A N+LG G P+PQ T D P AP G +
Sbjct: 788 -VMTPAVYAPYDVKVQAINQLGSG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLV 842
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYT 459
++W +P+++ + Y+I W K KE + + R +PS ++
Sbjct: 843 KVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFS 902
Query: 460 EYEVKVQAINDVGPGPESE 478
E+ + V A N G GPESE
Sbjct: 903 EFHLTVLAYNSKGAGPESE 921
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T++W ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFTWTKDGN-------PFHFTDHRIITSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 250 KPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPIDN 389
>gi|109035955|ref|XP_001097680.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Macaca mulatta]
Length = 1199
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 215/480 (44%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 342 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 395
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T +SA + V+ ++P + + + E YA G + + C A+P+ W+K
Sbjct: 396 VHGTILASANVDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEA 453
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR +++NG L I+ + +D+G YSC N G L + + + P
Sbjct: 454 KPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPK 512
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 513 NPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 569
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W G +
Sbjct: 570 NVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHN 629
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 630 SNISEYIVEFEGNKEDPGRW---------EELTRVQGKKTTVIL-PLAPFVRYQFRVIAV 679
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 680 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 739
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP + VT++
Sbjct: 740 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPAPQSVTLY 793
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 189/499 (37%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY + DN E D Y C +N
Sbjct: 435 CEFFASPEAVVSWQKV-----EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVEN 488
Query: 71 QLKTRYSSA--------QLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+ +A QLRV P K LE + C+ K
Sbjct: 489 AIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESK--------CDLHLKHSLKL 540
Query: 122 VWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG I G+ R I + NL IS V+ +D GIY C+A ++ VL
Sbjct: 541 SWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 600
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNIN 237
P E L ++ +R+++L A + +++ YI G + EL
Sbjct: 601 VPDPPENL--HLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGK 658
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHK 292
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 659 KTTVILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 715
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIE 348
I+W P Y++ TW V +E V +T R
Sbjct: 716 KEMIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR------ 761
Query: 349 NVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDL 403
V+ P ++ Y+ KV A N+LG G P+PQ T D P AP G +
Sbjct: 762 -VMTPAVYAPYDVKVQAINQLGSG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLV 816
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYT 459
++W +P+++ + Y+I W K KE + + R +PS ++
Sbjct: 817 KVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFS 876
Query: 460 EYEVKVQAINDVGPGPESE 478
E+ + V A N G GPESE
Sbjct: 877 EFHLTVLAYNSKGAGPESE 895
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 224 KPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 283
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 284 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 342
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 343 EAEGEPQPTIK--WRVNGSPIDN 363
>gi|402859571|ref|XP_003894226.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Papio anubis]
Length = 1225
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 215/480 (44%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T +SA + V+ ++P + + + E YA G + + C A+P+ W+K
Sbjct: 422 VHGTILASANVDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR +++NG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W G +
Sbjct: 596 NVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEDPGRW---------EELTRVQGKKTTVIL-PLAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPAPQSVTLY 819
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 189/499 (37%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY + DN E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSA--------QLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+ +A QLRV P K LE + C+ K
Sbjct: 515 AIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESK--------CDLHLKHSLKL 566
Query: 122 VWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG I G+ R I + NL IS V+ +D GIY C+A ++ VL
Sbjct: 567 SWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 626
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNIN 237
P E L ++ +R+++L A + +++ YI G + EL
Sbjct: 627 VPDPPENL--HLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGK 684
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHK 292
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 685 KTTVILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIE 348
I+W P Y++ TW V +E V +T R
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR------ 787
Query: 349 NVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDL 403
V+ P ++ Y+ KV A N+LG G P+PQ T D P AP G +
Sbjct: 788 -VMTPAVYAPYDVKVQAINQLGSG----PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLV 842
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYT 459
++W +P+++ + Y+I W K KE + + R +PS ++
Sbjct: 843 KVTWSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFS 902
Query: 460 EYEVKVQAINDVGPGPESE 478
E+ + V A N G GPESE
Sbjct: 903 EFHLTVLAYNSKGAGPESE 921
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 111/310 (35%), Gaps = 60/310 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T++W ++G P D R +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFTWTKDGN-------PFYFTDHRIITSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------- 161
+ + I R + + G+L + V DS Y C A
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEEL 209
+ H D S I S ++ LPP ITI L L C A E L
Sbjct: 226 SLKHANDSSSSTEIGSKANSIKQRKPKLLLPPTESGSESSITILKGETLLLECFA--EGL 283
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G G++ N G L+I N S+ D G Y C + +G +
Sbjct: 284 PTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 270 KTTVIVEGPP 279
VIVE PP
Sbjct: 338 DFHVIVEEPP 347
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 7/143 (4%)
Query: 87 KPSFKKRPLESETYAG----EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P ES + + +G + + C E P P+ W K G + G K
Sbjct: 250 KPKLLLPPTESGSESSITILKGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L I VS D G Y CTA+N G +IV P + ++ P + N L C
Sbjct: 310 TLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLC 368
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 369 EAEGEPQPTIK--WRVNGSPIDN 389
>gi|347964370|ref|XP_311259.5| AGAP000720-PA [Anopheles gambiae str. PEST]
gi|333467498|gb|EAA45046.5| AGAP000720-PA [Anopheles gambiae str. PEST]
Length = 1260
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 200/465 (43%), Gaps = 26/465 (5%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
+ CEA G P W NG+ ++ + R + + + I L + D Y C A
Sbjct: 366 FKCEAAGNPKPNIMWIHNGKQIDVS----QGNARRIVGSSSIYISKLQ-KSDTGNYGCNA 420
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N L Y L VL L P P + + NVT+ C APKP+ W ++
Sbjct: 421 TNSLGYVYKDVYLNVLALAPEITDPP--KREFTVDQRNVTMTCRVFGAPKPQVKWLRNDR 478
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ +GGR + +G+L I V DD+G Y+C A N G + G LIV + P
Sbjct: 479 EL-TGGRYQTMPSGDLFIRDVKFDDAGEYTCHAVNNLGSKSASGELIVKER-TVINDPPQ 536
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
A + RC+A + L++ W G I D E + I L I+
Sbjct: 537 DYEAEAGTTVTFRCNAIADSSLELTIEWLTKGEII---DF-ENQPRFIRTSDNSLMISKT 592
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
D G Y C+ ++ + ++ T+ V P P + V A I+W N P
Sbjct: 593 IELDTGTYTCLARTDLDEVMANATLTVMDRPN-PPTLTRVNCKGKVAQIEWISNGDNRSP 651
Query: 309 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 368
I +Y I T++ ++V D G A N PW+ Y F+VIA N++G
Sbjct: 652 ILNYIIEYNTSFTPDTYDVLS-------DDVPGTDFAWTVNT-TPWNNYTFRVIAVNKVG 703
Query: 369 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 428
PS S T + PY+ P + G G +L I W PL + NAP ++Y+++WR+
Sbjct: 704 RSLPSGHSDVCTTESSVPYKNPDNLEGEGTTPTNLVIKWRPLAQVDHNAPGLHYRVYWRR 763
Query: 429 K-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
E+ S ++++ V +P+ +T Y VKV A+ND G
Sbjct: 764 DIPGAEWNSADVRDWRQSSYTVEGLPT---FTRYSVKVVALNDRG 805
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 118/281 (41%), Gaps = 34/281 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P Y W +NG+ +T DR Q T+ +P + D YQC A+
Sbjct: 68 CEAEGEPTPKYRWIKNGKKFEWQTY----DDRMSQQPGRGTLVITSPRDEDLGQYQCFAE 123
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW---KK 125
N+ T S++ SFK ++ A EG + C P+ PKP W
Sbjct: 124 NEHGTATSNSVFVRKAELNSFKDGSPQT-LQADEGKPFKLVCQPPDGWPKPNVYWMIQNM 182
Query: 126 DGNIIGSGGRRKIFE-NGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH--- 178
DG I R + GNL S V+RDD Y+C A++V + G ++L
Sbjct: 183 DGGIRSINNSRMTLDPEGNLWFSNVTRDDESNDFFYACAASSVFRSEYKIGNRVLLQVKQ 242
Query: 179 -GPSYYE-QLPPKITIAAHRN--------LQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
G S + + PP+ + +N ++L C L + +WT NG I D
Sbjct: 243 TGISAAQNRHPPQRQYVSRKNEVALKGKQIELFCIYGGTPLPET--VWTKNGRAIVWND- 299
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
+++ N G L+I S DAG Y C V + VG+ +
Sbjct: 300 -KIQQDNY---GKSLKIRRVSSEDAGTYTCEVSNGVGQADS 336
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGN 106
E + Y C A + ++ Y +L +K P ++ A +G
Sbjct: 212 ESNDFFYACAASSVFRSEYKIGNRVLLQVKQTGISAAQNRHPPQRQYVSRKNEVALKGKQ 271
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVH 165
+ +FC P P+ VW K+G I + + G +L I VS +D+G Y+C +N
Sbjct: 272 IELFCIYGGTPLPETVWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTCEVSNGV 331
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
G +S + ++ Y+ P + A + +C A ++ +W HNG +I
Sbjct: 332 GQADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFKCEAAGNPKPNI--MWIHNGKQI-- 387
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
D+++ I + + I+ +D G Y C +++G +
Sbjct: 388 -DVSQGNARRI-VGSSSIYISKLQKSDTGNYGCNATNSLGYV 427
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNS---ETLPLEDQDRYFIQDNVLTIRYLNPER 59
+Q ++T TC FG P W RN L +T+P D FI+D +++
Sbjct: 453 DQRNVTMTCRVFGAPKPQVKWLRNDRELTGGRYQTMPSGD---LFIRD----VKF----D 501
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D Y C A N L ++ +S +L ++ + P + E AG VT CN A
Sbjct: 502 DAGEYTCHAVNNLGSKSASGEL-IVKERTVINDPPQDYEAEAGT--TVTFRCNAIADSSL 558
Query: 120 KFV--WKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
+ W G II + + + +L+IS D+G Y+C A + L
Sbjct: 559 ELTIEWLTKGEIIDFENQPRFIRTSDNSLMISKTIELDTGTYTCLARTDLDEVMANATLT 618
Query: 176 VLHGPSYYEQLPPKIT 191
V+ P+ PP +T
Sbjct: 619 VMDRPN-----PPTLT 629
>gi|355559497|gb|EHH16225.1| hypothetical protein EGK_11478 [Macaca mulatta]
Length = 1225
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 215/480 (44%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 368 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 421
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T +SA + V+ ++P + + + E YA G + + C A+P+ W+K
Sbjct: 422 VHGTILASANVDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEA 479
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR +++NG L I+ + +D+G YSC N G L + + + P
Sbjct: 480 KPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TQLRVSPK 538
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 539 NPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 595
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W G +
Sbjct: 596 NVTLEDQGIYCCSALTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLSWEAGDDHN 655
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 656 SNISEYIVEFEGNKEDPGRW---------EELTRVQGKKTTVIL-PLAPFVRYQFRVIAV 705
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 706 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 765
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP + VT++
Sbjct: 766 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPAPQSVTLY 819
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 188/496 (37%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + RY + DN E D Y C +N
Sbjct: 461 CEFFASPEAVVSWQKV-----EEAKPLEGR-RYHVYDNGTLQINRTTEEDAGSYSCWVEN 514
Query: 71 QLKTRYSSA--------QLRVLTLKPSFKK-RPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+ +A QLRV P K LE + C+ K
Sbjct: 515 AIGKTAVTANLDIRNATQLRVSPKNPRIPKLHMLELHCESK--------CDLHLKHSLKL 566
Query: 122 VWKKDGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KDG I G+ R I + NL IS V+ +D GIY C+A ++ VL
Sbjct: 567 SWSKDGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLD 626
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNIN 237
P E L ++ +R+++L A + +++ YI G + EL
Sbjct: 627 VPDPPENL--HLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRWEELTRVQGK 684
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHK 292
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 685 KTTVILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQP 741
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIE 348
I+W P Y++ TW V +E V +T R
Sbjct: 742 KEMIIKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR------ 787
Query: 349 NVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
V+ P ++ Y+ KV A N+LG G P+ S + D P AP G + ++
Sbjct: 788 -VMTPAVYAPYDVKVQAINQLGSG-PAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVT 845
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYE 462
W +P+++ + Y+I W K KE + + R +PS ++E+
Sbjct: 846 WSTIPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFH 905
Query: 463 VKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 906 LTVLAYNSKGAGPESE 921
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 22/224 (9%)
Query: 59 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
+D Y+C A N L T + ++ P + K+P +S Y+ G N + C E P+
Sbjct: 319 QDKGNYRCTASNFLGTATHDFHV-IVEEPPRWTKKP-QSAVYS-TGSNGILLCEAEGEPQ 375
Query: 119 PKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W+ +G+ I + +F + + + + + +Y C A+NVHG + + V
Sbjct: 376 PTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEASNVHGTILASANVDV 434
Query: 177 LHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ + P I N + H E + + V + LE
Sbjct: 435 V-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVSWQKVE----EAKPLE 483
Query: 233 TPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ D G L+I + DAG Y C V++ +GK + + +
Sbjct: 484 GRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDI 527
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
+A P P+ W K G + G K L I VS D G Y CTA+N G
Sbjct: 281 KAWPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFH 340
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+IV P + ++ P + N L C A E + W NG I N
Sbjct: 341 VIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPIDN 389
>gi|348578153|ref|XP_003474848.1| PREDICTED: neurofascin isoform 3 [Cavia porcellus]
Length = 1158
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 209/480 (43%), Gaps = 46/480 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 353 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 404
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 405 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 463
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 464 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIF 520
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P + +QL C + L + W + + IGN E ++
Sbjct: 521 RMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMKKEDDS--------- 571
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + D G Y CV + + + K + V G P P +++ ++ + S + W G
Sbjct: 572 LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPG 631
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y + + F + + ++ G +++ L P+ Y+F+VI
Sbjct: 632 DDNNSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVI 683
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G PS PS +Y T P PS + G G + ++ I+W P+ PN+ Y
Sbjct: 684 AINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRY 743
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ WR++ ET + + NV + R + Y YE++VQA ND G GPE + V
Sbjct: 744 IVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTV 796
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 48 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 105 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 163
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 164 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 223
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 224 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 279
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 280 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 332
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 258 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 311 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 367
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 368 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 422 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 475
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 476 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 516
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 206 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 265
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 266 SGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 323
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 324 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 378
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 379 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 427
>gi|354478081|ref|XP_003501244.1| PREDICTED: neurofascin isoform 2 [Cricetulus griseus]
Length = 1157
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 210/480 (43%), Gaps = 46/480 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 352 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 403
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 404 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 462
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 463 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 519
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P + +QL C + L + W + + IGN E ++
Sbjct: 520 RMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 570
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + D G Y C+ + + + K + V G P P +++ ++ + S + W G
Sbjct: 571 LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPG 630
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I + F + + ++ G +++ + L P+ Y+F+VI
Sbjct: 631 DDNNSPITDYVI----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVI 682
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G PS PS +Y T P PS + G G + ++ I+W P+ PN+ Y
Sbjct: 683 AVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRY 742
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ WR++ ET + + NV + R + Y YE++VQA ND G GPE + +
Sbjct: 743 IVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTI 795
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 223 FTLKVLTTRGVSERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 278
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 279 -GDLPSDKTKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 331
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 257 DLLLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNV-------SEEDSGEYF 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 310 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 366
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 367 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 421 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 474
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 475 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 205 YSCNARFHFTHTIQQKNPFTLKVLTTRGVSERTPSFMYPQGTSSSQMVLRGMDLLLECIA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 265 SGVPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 322
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 323 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 377
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 378 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 426
>gi|348578157|ref|XP_003474850.1| PREDICTED: neurofascin isoform 5 [Cavia porcellus]
Length = 1170
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 210/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 365 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 416
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 417 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 475
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 476 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 532
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P + +QL C + L + W + + IGN E ++
Sbjct: 533 PTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMKKEDDS---- 588
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 589 -----LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRL 643
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ L P+ Y
Sbjct: 644 TWIPGDDNNSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNY 695
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 696 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 755
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 756 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 808
Query: 476 ESEVV 480
E + V
Sbjct: 809 EPDTV 813
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 48 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 105 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 163
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 164 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 223
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 224 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 280
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 281 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 332
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 333 KMGSIRHTISVRVKAAP 349
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 275 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 327
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 328 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 384
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 385 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 438
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 439 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 492
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 493 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 533
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 281 L 281
+
Sbjct: 444 M 444
>gi|344276065|ref|XP_003409830.1| PREDICTED: neural cell adhesion molecule L1-like protein [Loxodonta
africana]
Length = 1225
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 213/484 (44%), Gaps = 43/484 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD----NVLTIRYLNPERDPAMYQC 66
CEA G P T W NG + + F+ D ++ L P + A+ QC
Sbjct: 368 CEAEGEPQPTIKWRMNGS---------PNINHPFVVDVRSPKEISFTNLQP-NNTAVLQC 417
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKK 125
A N T ++A + V+ + P + + E YA G + + C A+PK W+K
Sbjct: 418 EASNIHGTILTNANVDVVDIHPLIQTE--DEENYAAVVGYSAFLHCVFFASPKASVSWQK 475
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
D G R I ENG L I+ + +D+G YSC N G L + + +
Sbjct: 476 VDEAKPLEGIRYYIHENGTLQINKTTEEDAGPYSCWVENAKGKAAVTANLDIRNA-TKLR 534
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
P + L+L C + ++ L + W+ +G ++N E I IDG
Sbjct: 535 VSPKNPRVPRSHILELHCESKSDSHLKHSLKLSWSKDG---EAFEINGTEDGRIIIDGAN 591
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N + D G Y C+ ++ + + T V V P P + + E S + W G
Sbjct: 592 LTIANVTLEDQGVYSCLAQTALDSTADITQVTVLDLPDPPENLLLSERQNRSVRLSWEAG 651
Query: 303 ATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
+ I+ Y + N W +E+ R G KE ++ L P+ Y+F+
Sbjct: 652 DDHNSNISEYIVEFEGNKEEPGRW---------EELTRVQG-KETTVMLSLAPFVRYQFR 701
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA NE+G +PS PS + TP P + P I + ++ I WEPL +QN P +
Sbjct: 702 VIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGL 761
Query: 421 YYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE
Sbjct: 762 EYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINQLGSGPEPHS 815
Query: 480 VTIW 483
VT++
Sbjct: 816 VTLY 819
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 87 KPSFKKRPLESETYAGE----GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG 142
KP P E + + E G + + C E P P+ W K G + G K N
Sbjct: 250 KPRLLLPPTERGSRSSEVILKGETLLLECFAEGLPTPQVEWDKLGGDLPKGRVTKENYNK 309
Query: 143 NLLISPVSRDDSGIYSCTATNVHG 166
L I VS D GIY CTA N G
Sbjct: 310 TLKIENVSYHDKGIYRCTANNFLG 333
>gi|354478085|ref|XP_003501246.1| PREDICTED: neurofascin isoform 4 [Cricetulus griseus]
Length = 1169
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 211/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P + +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y C+ + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y I + F + + ++ G +++ + L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVI----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 695 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E + +
Sbjct: 808 EPDTI 812
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSARGVSERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKTKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|426333440|ref|XP_004028285.1| PREDICTED: neurofascin isoform 2 [Gorilla gorilla gorilla]
Length = 1271
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 466 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 517
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 518 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 576
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 577 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 633
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 634 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 689
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 690 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 744
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 745 TWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 796
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 797 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 856
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 857 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 909
Query: 476 ESEVV 480
E E V
Sbjct: 910 EPESV 914
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 149 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 205
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 206 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 264
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 265 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 324
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 325 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 381
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 382 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 433
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 434 KMGSIRHTISVRVKAAP 450
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 376 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 428
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 429 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 485
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 486 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 539
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 540 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 593
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 594 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 634
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 374 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 431
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 432 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 488
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 489 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 544
Query: 281 L 281
+
Sbjct: 545 M 545
>gi|301765664|ref|XP_002918249.1| PREDICTED: neurofascin-like isoform 3 [Ailuropoda melanoleuca]
Length = 1174
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 209/480 (43%), Gaps = 46/480 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 369 CRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSR--------AVYQCN 420
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 421 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 479
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 480 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIF 536
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 537 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMKKEDDS--------- 587
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + D G Y C+ + + + K + V G P P +++ ++ + S + W G
Sbjct: 588 LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPG 647
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y + + F + + ++ G +++ L P+ Y+F+VI
Sbjct: 648 DDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVI 699
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G PS PS +Y T P P+ + G G + ++ I+W P+ PN+ Y
Sbjct: 700 AINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRY 759
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ WR++ ET + + NV + R + S Y YE++VQA ND G GPE + V
Sbjct: 760 IVKWRRR-------ETRETWNNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPEPDTV 812
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S R E ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 122/317 (38%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EDYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D+ YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNA 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 93/248 (37%), Gaps = 35/248 (14%)
Query: 46 QDNVLTIRYL--NPERD------PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLE 96
Q N T++ L NP D P MY R V PSF +
Sbjct: 219 QKNAFTLKVLTNNPYNDSSLRNHPDMYSARG--------------VAERTPSFMYPQGTA 264
Query: 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDS 154
S G ++ + C P P W K G + S + FEN N L I+ VS +DS
Sbjct: 265 SSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDS 322
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A+N G + V P Y+ P + +A + +L C A+ V
Sbjct: 323 GEYFCLASNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ- 380
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV- 273
W NG + + N PN + G + + + Y+C + G + V
Sbjct: 381 -WMVNGEPLQSAPRN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVS 435
Query: 274 IVEGPPGL 281
+++ PP +
Sbjct: 436 VLDVPPRM 443
>gi|242019922|ref|XP_002430407.1| Neuroglian precursor, putative [Pediculus humanus corporis]
gi|212515537|gb|EEB17669.1| Neuroglian precursor, putative [Pediculus humanus corporis]
Length = 1253
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 207/470 (44%), Gaps = 32/470 (6%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLE---DQDRYFIQDNVLTIRYLNPERDPAM 63
+ + CEA GVP+ W NG LP+ R + N + I L+ + D
Sbjct: 351 VEFRCEANGVPEPQIKWIHNG-------LPIALAPPNPRRKVTPNSIVIEKLD-KLDTGN 402
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y C A N L Y + VL L P P + ET +G V + C APKP+ W
Sbjct: 403 YGCNATNSLGYVYKDVYVNVLALPPEILTSPTDKETV--DGRTVILTCRVFGAPKPEVKW 460
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
++ + +GGR +G+L I V+ D+G Y+C A N G E+ G L V +
Sbjct: 461 IRNSMEL-TGGRYNTLSSGDLEIKDVNFLDAGQYTCYAQNKFGHIEASGSLSVKEH-TKI 518
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
P I RC+A T+ L + W +G I D + E + L
Sbjct: 519 TDAPEDYEIPIGTTATFRCNAVTDSTLALTIDWLKDGEVI---DFDS-EPRFVKSADYSL 574
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
IT + D+G Y C+ K+ + K + T+ V+ P P ++V + ++ A+I+W
Sbjct: 575 TITKTTELDSGVYTCLAKTDLDKAEAQATLTVQDVPNAPRLIKV-QCNRMDASIRWEPLG 633
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI Y I T++ + V+ + Y+ + PW Y F+V+A
Sbjct: 634 DNRAPILSYTIQYNTSFAPDIWEVAYDNVPSIDQTYS--------VAMSPWVNYTFRVLA 685
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS S T D PY+ P + G G +L ISW P+P + N +Y
Sbjct: 686 RNKIGISLPSGHSEVCQTQPDVPYKNPDNVEGKGTHPNNLVISWTPMPEIEHNDEGFHYV 745
Query: 424 IFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
++W+K + + SE + ++ + + P+ + EY++KV AIN G
Sbjct: 746 VYWKKNIPGQNWNSEDVMDWQRSSLVISDQPT---FQEYKIKVIAINRRG 792
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 107/270 (39%), Gaps = 23/270 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C G P W ++G+ + L D+ L I+++ E D Y C A N
Sbjct: 263 CIFGGTPLPQIVWSKDGQPIR-----LNDRMTQGHYGKSLIIKHVTFE-DAGSYVCEASN 316
Query: 71 QL-KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
+ + + S L VL + P F +P A EG V C P+P+ W +G
Sbjct: 317 GVGQAKSYSIGLTVLAV-PYFTVQP--EIINAAEGETVEFRCEANGVPEPQIKWIHNGLP 373
Query: 130 IG---SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
I RRK+ N +++I + + D+G Y C ATN G + VL P
Sbjct: 374 IALAPPNPRRKVTPN-SIVIEKLDKLDTGNYGCNATNSLGYVYKDVYVNVLALPPEILTS 432
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P R + L C +V W N + + N L + G LEI
Sbjct: 433 PTDKETVDGRTVILTCRVFGAPKPEVK--WIRNSMELTGGRYNTLSS-------GDLEIK 483
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVE 276
+ +F DAG+Y C ++ G I ++ V+
Sbjct: 484 DVNFLDAGQYTCYAQNKFGHIEASGSLSVK 513
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 112/281 (39%), Gaps = 40/281 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNP-ERDPAMYQC 66
CEA G P Y W +NG+ P E Q +R Q T+ +P + D YQC
Sbjct: 55 CEAEGEPAPKYRWIKNGK-------PFEYQVYDNRMSQQPGRGTLVITSPRDEDLGQYQC 107
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW-- 123
A+N T S++ +FK P + A EG + C+ P+ PKP W
Sbjct: 108 FAENTWGTATSNSVFVRKAELNAFKDEPPIT-VNANEGEPFRLVCHPPDGWPKPNVYWLI 166
Query: 124 -KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGI---YSCTATNVHGMDESKGRLIVLH 178
DG I+ R + GNL S V+R+DS Y C AT+ + G + L
Sbjct: 167 QNSDGGIMSINNSRMTLDPEGNLWFSNVTREDSSKEFRYVCAATSPFRNEYKIGNTVALK 226
Query: 179 ------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGN 225
S Q P + ++ + LR EL + +W+ +G I
Sbjct: 227 VIATGIAASQNRQEPVQQYVSRKNEIALR--GKRVELFCIFGGTPLPQIVWSKDGQPI-- 282
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
LN+ T G L I + +F DAG Y C + VG+
Sbjct: 283 -RLNDRMTQGHY--GKSLIIKHVTFEDAGSYVCEASNGVGQ 320
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 159
A G V +FC P P+ VW KDG I R G +L+I V+ +D+G Y C
Sbjct: 253 ALRGKRVELFCIFGGTPLPQIVWSKDGQPIRLNDRMTQGHYGKSLIIKHVTFEDAGSYVC 312
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A+N G +S + + Y+ P I A ++ RC A+ + + W HN
Sbjct: 313 EASNGVGQAKSYSIGLTVLAVPYFTVQPEIINAAEGETVEFRCEANG--VPEPQIKWIHN 370
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G+ I N P + + I D G Y C +++G + V V P
Sbjct: 371 GLPIALAPPN----PRRKVTPNSIVIEKLDKLDTGNYGCNATNSLGYVYKDVYVNVLALP 426
>gi|281349789|gb|EFB25373.1| hypothetical protein PANDA_019648 [Ailuropoda melanoleuca]
Length = 574
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 165/349 (47%), Gaps = 8/349 (2%)
Query: 135 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 194
R + +G+L I S+ D G Y+C NV G E + V P+ E P + +
Sbjct: 1 RIAVLPDGSLRILNASKSDEGKYTCQGENVFGSAEIIASVSVKE-PTRIELTPKRTELTV 59
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADA 253
++ L C A + LDV + WT G I + E+ L I N A
Sbjct: 60 GESIVLNCRAIHDASLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHA 119
Query: 254 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 313
G Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W+ N PI+ Y
Sbjct: 120 GRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPATDNHSPISSYN 179
Query: 314 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373
+ AR+ ++ W + + TG E+++ L PW YEF+V+A N +G G+PS
Sbjct: 180 LQARSPFSLGW-----QTVKTIPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 234
Query: 374 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 433
+PS T P AP+ + G G+ +L I+WEP+ E QN Y + +R N T
Sbjct: 235 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTR 293
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
E + + R S T +EVKV N+ G GP S++V I
Sbjct: 294 GWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVI 342
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F V A N GYG PSS T P QAPS + + LS+ WEP+
Sbjct: 420 YHFTVRAYNGAGYGPPSS-EVSATTKKFPPSQAPSNLRWEQ-QGSQLSLGWEPVRPLANE 477
Query: 417 APNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+ + YK+F+R+++ + Q ET K AVV +P Y ++V+A +D G G
Sbjct: 478 SEVMGYKVFYRQESHSNSQVIETQKPQ-----AVVPLPDAGVYI---IEVRAYSDGGDGM 529
Query: 476 ESEVVTI 482
S + +
Sbjct: 530 ASSQIRV 536
>gi|348578151|ref|XP_003474847.1| PREDICTED: neurofascin isoform 2 [Cavia porcellus]
Length = 1175
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 210/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 365 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 416
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 417 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 475
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 476 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 532
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P + +QL C + L + W + + IGN E ++
Sbjct: 533 PTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMKKEDDS---- 588
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 589 -----LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRL 643
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ L P+ Y
Sbjct: 644 TWIPGDDNNSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNY 695
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 696 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 755
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 756 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 808
Query: 476 ESEVV 480
E + V
Sbjct: 809 EPDTV 813
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 48 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 105 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 163
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 164 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 223
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 224 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 280
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 281 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 332
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 333 KMGSIRHTISVRVKAAP 349
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 275 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 327
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 328 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 384
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 385 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 438
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 439 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 492
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 493 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 533
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 281 L 281
+
Sbjct: 444 M 444
>gi|410899607|ref|XP_003963288.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Takifugu rubripes]
Length = 1314
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 219/484 (45%), Gaps = 34/484 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+D+ C G P +W +NGEL + Q+ + D+ + + PE D A+Y
Sbjct: 394 SDVHIKCSVSGKPPPDITWRKNGELFTDDP-----QNNRRVLDDTVVLHNAGPE-DTAVY 447
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW 123
QC A N + ++ + V+ + P R +S+ Y +G +V + C+ +P P W
Sbjct: 448 QCDASNSHGSLLANINIMVMNMAPRILTR--DSQEYPVVQGADVVMNCSVFGSPPPTVSW 505
Query: 124 KKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+ GGR +NG+L I V ++D G Y C A N G L V P+
Sbjct: 506 SRGATQETIEGGRFFALQNGSLQIIGVEKEDGGKYVCVALNAEGKSAVSAMLEV-KDPTR 564
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINIDG 240
P + + QL C A ++ L ++ +W +G ++ L E +DG
Sbjct: 565 IISRPQDAEVVSGTTAQLNCLAEYDKSLQDSFELVWRKDG---EDIPLAVQENSRHGVDG 621
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK-TSATIQW 299
+L+I N +D G Y CV ++++ + + + V P P +++ E+ + ++ W
Sbjct: 622 AVLQIINVDLSDNGLYTCVARTSLDEENATALLTVLDVPDAPLKLEISEIRSPRNISLSW 681
Query: 300 TDGATNGRPITHYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
G+ + +T + + + W + + V G + A+ L Y+
Sbjct: 682 VPGSDHNSSVTEFVVEYEESQWEPGRWRDFQRVPGNQ---------ATAMLALQGDLDYK 732
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N +G G PS P+ ++ TP P + P I G + + ISWEPL + N P
Sbjct: 733 FRVYAVNAVGPGPPSDPTERHKTPPAAPEKNPQSIKIQGHRPHQMDISWEPLLPIEHNGP 792
Query: 419 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ YK+ +R+ + E++ +K + VVR S F YEVK+Q+ N+ G GPE
Sbjct: 793 GLEYKVSYRRLGVEEEWKEHLVKRHS----FVVRNVSTF--VPYEVKIQSKNNQGWGPEP 846
Query: 478 EVVT 481
+VVT
Sbjct: 847 KVVT 850
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 113/290 (38%), Gaps = 40/290 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELL---NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
CEA G P Y W ++GE + T + D F+ I++ +Y+C
Sbjct: 108 CEARGNPPPEYRWTKDGEGFVPPRASTTKTQHTDGSFVLHKKQFIQF------QGVYRCY 161
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE--AAPKPKFVWKK 125
A N+L T + ++ PSF K + EG +T+ CNP A P+ F
Sbjct: 162 AFNKLGTAMTEDIQLIVPTAPSFPKVGVPP-IVVDEGDPITLHCNPPKGAVPRQLFWMSL 220
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLHGPSY 182
D +I R + +GNL + ++D+ Y C A + M + G I + P
Sbjct: 221 DLQLIQQDERVSMGTDGNLYFAHALKNDTRQDYCCNAKFPKLRTMVQKIGMAISVRIPEA 280
Query: 183 YEQ------LPP-----KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
LPP K+ + R LQL C + + + M + E
Sbjct: 281 PPMRMPSMLLPPGVQTEKVVLKGER-LQLECIPGGYPIPKIKW-----------MKMGEK 328
Query: 232 ETPNINID--GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ D G LL +++ D G+Y C ++ G+ VIVE PP
Sbjct: 329 LSSRTQFDNFGKLLLLSDTEENDGGKYMCKAQNAAGEAVHYFDVIVEEPP 378
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 12/183 (6%)
Query: 95 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRD 152
+++E +G + + C P P PK W K G + S R F+N LL+S +
Sbjct: 294 VQTEKVVLKGERLQLECIPGGYPIPKIKWMKMGEKLSS---RTQFDNFGKLLLLSDTEEN 350
Query: 153 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 212
D G Y C A N G +IV P + + P ++ ++CS + D+
Sbjct: 351 DGGKYMCKAQNAAGEAVHYFDVIVEEPPKWLTEPPRDQLTVIGSDVHIKCSVSGKPPPDI 410
Query: 213 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272
W NG + N N + + + NA D Y+C ++ G +
Sbjct: 411 T--WRKNGELFTDDPQN-----NRRVLDDTVVLHNAGPEDTAVYQCDASNSHGSLLANIN 463
Query: 273 VIV 275
++V
Sbjct: 464 IMV 466
>gi|119611934|gb|EAW91528.1| hCG16415, isoform CRA_e [Homo sapiens]
Length = 1124
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 210/486 (43%), Gaps = 48/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 449 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 499
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 500 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 558
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 559 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 615
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 616 DPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 672
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I + D G Y CV + + + K + V G P P +++ ++ + S
Sbjct: 673 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVR 726
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N PIT Y + + F + + +Y G +++ L P+
Sbjct: 727 LTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVN 778
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 779 YQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAF 838
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G G
Sbjct: 839 GPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 891
Query: 475 PESEVV 480
PE E V
Sbjct: 892 PEPESV 897
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 149 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 205
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 206 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 264
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 265 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 324
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 325 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 380
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 381 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 433
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 359 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 411
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 412 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 468
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 469 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 522
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 523 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 576
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 577 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 617
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 307 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 366
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 367 SGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 424
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 425 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 479
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 480 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 528
>gi|380792623|gb|AFE68187.1| neurofascin isoform 3 precursor, partial [Macaca mulatta]
Length = 1086
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 210/486 (43%), Gaps = 48/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 414
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 415 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 473
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 474 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 530
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 531 DPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 587
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I + D G Y CV + + + K + V G P P +++ ++ + S
Sbjct: 588 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVR 641
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N PIT Y + + F + + +Y G +++ L P+
Sbjct: 642 LTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVN 693
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 694 YQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAF 753
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G G
Sbjct: 754 GPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 806
Query: 475 PESEVV 480
PE E V
Sbjct: 807 PEPESV 812
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 193/505 (38%), Gaps = 87/505 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 463 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 516
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 517 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 573
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P L
Sbjct: 574 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL-- 630
Query: 189 KITIAAHRNLQLR-------------CSAHTEELLDVAYIWTHNGVRIGNMDLNELE-TP 234
++T A R+++L EE +W + G+++ L +P
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP 690
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKT 293
+N ++ + V S+ + ++ PP PG V+ K
Sbjct: 691 YVNYQFRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 738
Query: 294 SATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ I WT + + P Y + R WN+ S +V+G+
Sbjct: 739 NMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP---------- 788
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
V VP YE +V A N+ G G P S + D P AP+ + +S+
Sbjct: 789 ---VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQ 841
Query: 407 WEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIP 453
W + P Q Y +WR K+ F + L+ G+ V R+
Sbjct: 842 WNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL- 894
Query: 454 SEFYYTEYEVKVQAINDVGPGPESE 478
F Y+ Y++++ +N G GP SE
Sbjct: 895 --FPYSNYKLEMVVVNGRGDGPRSE 917
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|426333442|ref|XP_004028286.1| PREDICTED: neurofascin isoform 3 [Gorilla gorilla gorilla]
Length = 1276
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 466 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 517
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 518 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 576
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 577 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 633
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 634 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 689
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 690 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 744
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 745 TWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 796
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 797 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 856
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 857 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 909
Query: 476 ESEVV 480
E E V
Sbjct: 910 EPESV 914
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 149 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 205
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 206 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 264
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 265 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 324
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 325 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 381
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 382 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 433
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 434 KMGSIRHTISVRVKAAP 450
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 376 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 428
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 429 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 485
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 486 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 539
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 540 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 593
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 594 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 634
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 374 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 431
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 432 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 488
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 489 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 544
Query: 281 L 281
+
Sbjct: 545 M 545
>gi|237858634|ref|NP_001153790.1| neurofascin isoform 4 precursor [Mus musculus]
Length = 1157
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 216/489 (44%), Gaps = 54/489 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 347 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 397
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
A+YQC N+ ++A + VL + P S + + + Y + C +P
Sbjct: 398 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPI 453
Query: 119 PKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL
Sbjct: 454 PTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 511
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELET 233
V P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 512 V-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS 570
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 293
L I + D G Y C+ + + + K + V G P P +++ ++ +
Sbjct: 571 ---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAER 621
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
S + W G N PIT Y + + F + + R+ G +++ + L P
Sbjct: 622 SVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNSAVLH-LSP 673
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 674 YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNAT 733
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDV 471
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND
Sbjct: 734 SAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDF 786
Query: 472 GPGPESEVV 480
G GPE + +
Sbjct: 787 GKGPEPDTI 795
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 223 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 278
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ N+ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 279 -GDLPSNKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 331
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ NV E D Y
Sbjct: 257 DLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNV-------SEEDSGEYF 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 310 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 366
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 367 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 421 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 474
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 475 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 205 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 265 SGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 322
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 323 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 377
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 378 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 426
>gi|224809606|ref|NP_001139239.1| neurofascin precursor [Danio rerio]
gi|224383688|gb|ACN42744.1| neurofascin neuronal isoform [Danio rerio]
Length = 1369
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 214/493 (43%), Gaps = 56/493 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVL--TIRYLNPERDPAMYQCRA 68
C A G P T W NGE + S L + +R + D ++ T+++ A+YQC A
Sbjct: 357 CRANGSPKPTIQWLVNGEPIESS---LPNPNRRVLDDTIIFETVQF----ESSAVYQCNA 409
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N+ ++A + VL + P P E + C +P P W K+G
Sbjct: 410 SNEHGYLLANAFVSVLDMAPRMLG-PKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNG- 467
Query: 129 IIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+GSG G +++ NG L I +D G Y+C A+++ G E++ RL V P+ +
Sbjct: 468 -LGSGLDGGHYRLYHNGTLEIKQARTEDQGTYTCVASSILGKMENQVRLEVKE-PTRIVR 525
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P T ++ C + L W + + + L+ D L I
Sbjct: 526 APEHKTEPRGTTVRFDCRVKHDPSLPATVTWLKDEKPLSFSWIGRLKK-----DDESLTI 580
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIV--------------EGPPGLPGGVQVVEVH 291
N + D G Y C K+ + + + + V G P P +++ +
Sbjct: 581 YNVNPDDGGTYTCTAKTEIDEDTASARLTVTENDSSSASNRSASAGRPDPPQDLELSDPS 640
Query: 292 KTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + W G N P+TH+ + W W N+S + S+
Sbjct: 641 ARSVRLTWVPGNENNSPVTHFLVQFEEDRWEPGKWQNLSIYDWNLN----------SVNL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y+F+VIA N +G +PS PS +Y T P PS + G G K ++ I+W+
Sbjct: 691 QLSPFVNYQFRVIAINAVGQSQPSHPSARYQTSGAPPDVVPSGLKGWGSKKNNMEITWQA 750
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQA 467
+ ++N PN+ Y + WR+K DTE +E+ N+ A + + + Y YE+K+QA
Sbjct: 751 MQNTERNGPNLRYVLSWRRK-DTE------EEWNNITTAKTKHVVHNTDTYVPYEIKIQA 803
Query: 468 INDVGPGPESEVV 480
+ND G GPES +V
Sbjct: 804 VNDFGHGPESNMV 816
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 112/302 (37%), Gaps = 42/302 (13%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL-NPER 59
+D + ++ CEA G P T+ W RNG+ N P + L IR PE
Sbjct: 54 VDPRDNIIIECEAKGNPVPTFQWRRNGKFFNVGKDPRVTMRS---RSGTLEIRSSGKPED 110
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
YQC A N L T S+ L ++ P + K LE T EG + + CNP P
Sbjct: 111 YEGEYQCFASNNLGTAISNKILLRVSKSPLWPKEVLEPVT-VREGSPLVLACNPPPGLPP 169
Query: 120 KFVWKKDGNIIGSGGRRKIFE--NGNLLISPV-SRDDSGIYSCTA----------TNVHG 166
+ D I+ R++ NG+L S V ++D YSC A N +
Sbjct: 170 PETFWMDSFIMPIAQDRRVSMGLNGDLFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPYT 229
Query: 167 MDESKGRLIVLHGPSYYEQ--LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---- 220
+ R I P+ LP + L L C A + W+ G
Sbjct: 230 LKVQTMRNIPETQPTSLSPTGLPSTKMVLRGGELLLECIAAGVPTPTIT--WSKRGGDLP 287
Query: 221 ---VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
VRIGN D L I N S D G Y C+ + +G I V V+
Sbjct: 288 TKKVRIGNFD-------------KTLRILNVSEEDIGSYTCMASNRIGSIRHTVEVQVKA 334
Query: 278 PP 279
P
Sbjct: 335 AP 336
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 188/509 (36%), Gaps = 67/509 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P WF+NG L S L+ + L I+ E D Y C A +
Sbjct: 451 CPFFGSPLPLLRWFKNG--LGSG---LDGGHYRLYHNGTLEIKQARTE-DQGTYTCVASS 504
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKDGN 128
L + Q+R+ +P+ R E +T G V C + P W KD
Sbjct: 505 ILGKMEN--QVRLEVKEPTRIVRAPEHKTEP-RGTTVRFDCRVKHDPSLPATVTWLKDEK 561
Query: 129 IIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ GR K ++ +L I V+ DD G Y+CTA D + RL V S
Sbjct: 562 PLSFSWIGRLKK-DDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTVTENDSSSASN 620
Query: 187 ---------PPK---ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
PP+ ++ + R+++L E V TH V+ +
Sbjct: 621 RSASAGRPDPPQDLELSDPSARSVRLTWVPGNENNSPV----THFLVQFEEDRWEPGKWQ 676
Query: 235 NINIDGGLLEITNASFADAGEYE-------CVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
N++I L N + Y+ V +S S + P +P G++
Sbjct: 677 NLSIYDWNLNSVNLQLSPFVNYQFRVIAINAVGQSQPSHPSARYQTSGAPPDVVPSGLKG 736
Query: 288 VEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
K + I W + NG + + R + W N++ T + +
Sbjct: 737 WGSKKNNMEITWQAMQNTERNGPNLRYVLSWRRKDTEEEWNNIT-----------TAKTK 785
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ N + YE K+ A N+ G+G S+ Y+ DKP AP+ + ++
Sbjct: 786 HVVHNTDT-YVPYEIKIQAVNDFGHGPESNMVIGYSG-EDKPSAAPTDLRVSKINSTKVN 843
Query: 405 ISWEPLPREKQNAPNIYYKI-FWR--------KKNDTEFQSETLKEYGNVGIAVVRIPSE 455
I WEP+ + N YK+ +WR K N T+ K + I +E
Sbjct: 844 IHWEPVEQSSVNGEFKEYKLYYWREASLIKGLKVNRTKLH----KGFFTTAENPSGILTE 899
Query: 456 FY-YTEYEVKVQAINDVGPGPESEVVTIW 483
Y Y++Y++ + N GP+S V +
Sbjct: 900 LYPYSKYKMYMVVANREHEGPQSNTVEFY 928
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 118/306 (38%), Gaps = 42/306 (13%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLKPSFKKRP-------LESETYAGEGGNVTIFCNP 113
Y C A+ + + + L+V T++ + +P L S GG + + C
Sbjct: 210 YSCNARFEFTHTIQQKNPYTLKVQTMRNIPETQPTSLSPTGLPSTKMVLRGGELLLECIA 269
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
P P W K G + + R + L I VS +D G Y+C A+N G
Sbjct: 270 AGVPTPTITWSKRGGDLPTKKVRIGNFDKTLRILNVSEEDIGSYTCMASNRIGSIRHTVE 329
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ V P + E+ P + +A + +L C A+ + W NG I + L
Sbjct: 330 VQVKAAPFWLEK-PINLVLAPDESGRLVCRANGSPKPTIQ--WLVNGEPIE----SSLPN 382
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPGG----VQVV 288
PN + + F + Y+C + G + V +++ P + G ++V+
Sbjct: 383 PNRRVLDDTIIFETVQFESSAVYQCNASNEHGYLLANAFVSVLDMAPRMLGPKNQLIKVI 442
Query: 289 EVHKTS----------ATIQW-TDGATNGRPITHYKII---------ARTNWNSTWFNVS 328
E ++T ++W +G +G HY++ ART T+ V+
Sbjct: 443 ENNRTFLECPFFGSPLPLLRWFKNGLGSGLDGGHYRLYHNGTLEIKQARTEDQGTYTCVA 502
Query: 329 EHVIGK 334
++GK
Sbjct: 503 SSILGK 508
>gi|332811714|ref|XP_514129.3| PREDICTED: neurofascin isoform 3 [Pan troglodytes]
Length = 1271
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 466 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 517
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 518 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 576
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 577 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 633
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 634 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 689
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 690 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 744
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 745 TWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 796
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 797 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 856
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 857 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 909
Query: 476 ESEVV 480
E E V
Sbjct: 910 EPESV 914
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 149 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 205
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 206 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 264
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 265 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 324
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 325 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 381
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 382 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 433
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 434 KMGSIRHTISVRVKAAP 450
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 376 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 428
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 429 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 485
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 486 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 539
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 540 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 593
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 594 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 634
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 374 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 431
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 432 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 488
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 489 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 544
Query: 281 L 281
+
Sbjct: 545 M 545
>gi|89903008|ref|NP_055905.2| neurofascin isoform 4 precursor [Homo sapiens]
gi|168273078|dbj|BAG10378.1| neurofascin precursor [synthetic construct]
gi|187952493|gb|AAI37014.1| Neurofascin homolog (chicken) [Homo sapiens]
Length = 1169
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 643 TWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 695 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E E V
Sbjct: 808 EPESV 812
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|237858679|ref|NP_001153804.1| neurofascin isoform 3 precursor [Homo sapiens]
Length = 1174
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 210/486 (43%), Gaps = 48/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 414
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 415 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 473
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 474 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 530
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 531 DPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 587
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I + D G Y CV + + + K + V G P P +++ ++ + S
Sbjct: 588 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVR 641
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N PIT Y + + F + + +Y G +++ L P+
Sbjct: 642 LTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVN 693
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 694 YQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAF 753
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G G
Sbjct: 754 GPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 806
Query: 475 PESEVV 480
PE E V
Sbjct: 807 PEPESV 812
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|390477460|ref|XP_002760748.2| PREDICTED: neurofascin isoform 3 [Callithrix jacchus]
Length = 1169
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 695 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E E V
Sbjct: 808 EPESV 812
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 193/506 (38%), Gaps = 87/506 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 463 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 516
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 517 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 573
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P L
Sbjct: 574 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL-- 630
Query: 189 KITIAAHRNLQLR-------------CSAHTEELLDVAYIWTHNGVRIGNMDLNELE-TP 234
++T A R+++L EE +W + G+++ L +P
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP 690
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKT 293
+N ++ I V S+ + ++ PP PG V+ K
Sbjct: 691 YVNYQFRVIAINE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 738
Query: 294 SATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ I WT + + P Y + R WN+ S +V+G+
Sbjct: 739 NMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP---------- 788
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
V VP YE +V A N+ G G P S + D P AP+ + +++
Sbjct: 789 ---VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVVNSTAINLQ 841
Query: 407 WEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIP 453
W + P Q Y +WR K+ F + L+ G+ V R+
Sbjct: 842 WNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL- 894
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEV 479
F Y+ Y++++ +N G GP SE
Sbjct: 895 --FPYSNYKLEMVVVNGRGDGPRSET 918
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPIAQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|119611932|gb|EAW91526.1| hCG16415, isoform CRA_c [Homo sapiens]
Length = 1127
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 210/486 (43%), Gaps = 48/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 452 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 502
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 503 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 561
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 562 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 618
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 619 DPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 675
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I + D G Y CV + + + K + V G P P +++ ++ + S
Sbjct: 676 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVR 729
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N PIT Y + + F + + +Y G +++ L P+
Sbjct: 730 LTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVN 781
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 782 YQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAF 841
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G G
Sbjct: 842 GPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 894
Query: 475 PESEVV 480
PE E V
Sbjct: 895 PEPESV 900
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 152 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 208
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 209 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 267
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 268 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 327
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 328 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 383
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 384 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 436
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 362 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 414
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 415 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 471
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 472 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 525
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 526 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 579
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 580 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 620
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 310 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 369
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 370 SGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 427
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 428 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 482
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 483 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 531
>gi|380810880|gb|AFE77315.1| neurofascin isoform 3 precursor [Macaca mulatta]
Length = 1180
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 370 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 421
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 422 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 480
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 481 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 537
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 538 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 593
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 594 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 648
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 649 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 700
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 701 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 760
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 761 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 813
Query: 476 ESEVV 480
E E V
Sbjct: 814 EPESV 818
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 193/506 (38%), Gaps = 87/506 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 469 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 522
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 523 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 579
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P L
Sbjct: 580 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL-- 636
Query: 189 KITIAAHRNLQLR-------------CSAHTEELLDVAYIWTHNGVRIGNMDLNELE-TP 234
++T A R+++L EE +W + G+++ L +P
Sbjct: 637 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP 696
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKT 293
+N ++ + V S+ + ++ PP PG V+ K
Sbjct: 697 YVNYQFRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 744
Query: 294 SATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ I WT + + P Y + R WN+ S +V+G+
Sbjct: 745 NMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP---------- 794
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
V VP YE +V A N+ G G P S + D P AP+ + +S+
Sbjct: 795 ---VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQ 847
Query: 407 WEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIP 453
W + P Q Y +WR K+ F + L+ G+ V R+
Sbjct: 848 WNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL- 900
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEV 479
F Y+ Y++++ +N G GP SE
Sbjct: 901 --FPYSNYKLEMVVVNGRGDGPRSET 924
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 229 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 285
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 286 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 337
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 338 KMGSIRHTISVRVKAAP 354
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 280 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 332
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 333 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 389
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 390 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 443
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 444 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 497
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 498 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 538
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 278 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 335
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 336 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 392
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 393 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 448
Query: 281 L 281
+
Sbjct: 449 M 449
>gi|380788287|gb|AFE66019.1| neurofascin isoform 3 precursor [Macaca mulatta]
Length = 1174
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 695 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E E V
Sbjct: 808 EPESV 812
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 193/506 (38%), Gaps = 87/506 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 463 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 516
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 517 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 573
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P L
Sbjct: 574 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL-- 630
Query: 189 KITIAAHRNLQLR-------------CSAHTEELLDVAYIWTHNGVRIGNMDLNELE-TP 234
++T A R+++L EE +W + G+++ L +P
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP 690
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKT 293
+N ++ + V S+ + ++ PP PG V+ K
Sbjct: 691 YVNYQFRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 738
Query: 294 SATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ I WT + + P Y + R WN+ S +V+G+
Sbjct: 739 NMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP---------- 788
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
V VP YE +V A N+ G G P S + D P AP+ + +S+
Sbjct: 789 ---VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQ 841
Query: 407 WEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIP 453
W + P Q Y +WR K+ F + L+ G+ V R+
Sbjct: 842 WNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL- 894
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEV 479
F Y+ Y++++ +N G GP SE
Sbjct: 895 --FPYSNYKLEMVVVNGRGDGPRSET 918
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|380810884|gb|AFE77317.1| neurofascin isoform 3 precursor [Macaca mulatta]
Length = 1158
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 348 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 399
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 400 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 458
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 459 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 515
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 516 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 571
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 572 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 626
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 627 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 678
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 679 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 738
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 739 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 791
Query: 476 ESEVV 480
E E V
Sbjct: 792 EPESV 796
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 120/301 (39%), Gaps = 37/301 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDE--- 169
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 170 ------SKGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRCSAHTEELLDVAYIWTH 218
+ R + PS+ + P+ T ++ +L L C A D+A W
Sbjct: 223 FTLKVLTSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYK 277
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+
Sbjct: 278 KG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAA 331
Query: 279 P 279
P
Sbjct: 332 P 332
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 193/506 (38%), Gaps = 87/506 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 447 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 500
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 501 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 557
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P L
Sbjct: 558 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL-- 614
Query: 189 KITIAAHRNLQLR-------------CSAHTEELLDVAYIWTHNGVRIGNMDLNELE-TP 234
++T A R+++L EE +W + G+++ L +P
Sbjct: 615 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP 674
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKT 293
+N ++ + V S+ + ++ PP PG V+ K
Sbjct: 675 YVNYQFRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 722
Query: 294 SATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ I WT + + P Y + R WN+ S +V+G+
Sbjct: 723 NMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP---------- 772
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
V VP YE +V A N+ G G P S + D P AP+ + +S+
Sbjct: 773 ---VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQ 825
Query: 407 WEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIP 453
W + P Q Y +WR K+ F + L+ G+ V R+
Sbjct: 826 WNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL- 878
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEV 479
F Y+ Y++++ +N G GP SE
Sbjct: 879 --FPYSNYKLEMVVVNGRGDGPRSET 902
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 258 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 311 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 367
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 368 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 422 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 475
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 476 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 516
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 13/222 (5%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+ + KN + ++ V PSF + S G ++ + C P P
Sbjct: 215 HTIQQKNPFTLKVLTSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA 274
Query: 123 WKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K G + S + FEN N L I+ VS +DSG Y C A+N G + V P
Sbjct: 275 WYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 332
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
Y+ P + +A + +L C A+ V W NG + + N PN + G
Sbjct: 333 -YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN----PNREVAG 385
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+ + + Y+C + G + V +++ PP +
Sbjct: 386 DTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 427
>gi|237858632|ref|NP_001153789.1| neurofascin isoform 3 precursor [Mus musculus]
Length = 1174
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 216/489 (44%), Gaps = 54/489 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 414
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
A+YQC N+ ++A + VL + P S + + + Y + C +P
Sbjct: 415 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPI 470
Query: 119 PKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL
Sbjct: 471 PTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 528
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELET 233
V P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 529 V-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS 587
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 293
L I + D G Y C+ + + + K + V G P P +++ ++ +
Sbjct: 588 ---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAER 638
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
S + W G N PIT Y + + F + + R+ G +++ + L P
Sbjct: 639 SVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNSAVLH-LSP 690
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 691 YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNAT 750
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDV 471
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND
Sbjct: 751 SAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDF 803
Query: 472 GPGPESEVV 480
G GPE + +
Sbjct: 804 GKGPEPDTI 812
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ N+ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSNKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|71891758|dbj|BAA34476.3| KIAA0756 protein [Homo sapiens]
Length = 1222
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 210/486 (43%), Gaps = 48/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 417 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 467
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 468 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 526
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 527 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 583
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 584 DPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 640
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I + D G Y CV + + + K + V G P P +++ ++ + S
Sbjct: 641 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVR 694
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N PIT Y + + F + + +Y G +++ L P+
Sbjct: 695 LTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVN 746
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 747 YQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAF 806
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G G
Sbjct: 807 GPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 859
Query: 475 PESEVV 480
PE E V
Sbjct: 860 PEPESV 865
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 100 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 156
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 157 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 215
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 216 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 275
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 276 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 332
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 333 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 384
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 385 KMGSIRHTISVRVKAAP 401
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 327 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 379
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 380 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 436
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 437 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 490
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 491 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 544
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 545 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 585
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 325 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 382
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 383 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 439
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 440 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 495
Query: 281 L 281
+
Sbjct: 496 M 496
>gi|332811716|ref|XP_003308756.1| PREDICTED: neurofascin isoform 2 [Pan troglodytes]
Length = 1276
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 210/486 (43%), Gaps = 48/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 466 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 516
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 517 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 575
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 576 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 632
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 633 DPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 689
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I + D G Y CV + + + K + V G P P +++ ++ + S
Sbjct: 690 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVR 743
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N PIT Y + + F + + +Y G +++ L P+
Sbjct: 744 LTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVN 795
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 796 YQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAF 855
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G G
Sbjct: 856 GPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 908
Query: 475 PESEVV 480
PE E V
Sbjct: 909 PEPESV 914
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 149 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 205
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 206 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 264
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 265 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 324
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 325 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 381
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 382 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 433
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 434 KMGSIRHTISVRVKAAP 450
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 376 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 428
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 429 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 485
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 486 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 539
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 540 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 593
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 594 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 634
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 374 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 431
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 432 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 488
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 489 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 544
Query: 281 L 281
+
Sbjct: 545 M 545
>gi|54633206|dbj|BAD66839.1| KIAA0756 splice variant 1 [Homo sapiens]
Length = 836
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 210/486 (43%), Gaps = 48/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 161 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 211
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 212 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 270
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 271 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 327
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 328 DPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 384
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I + D G Y CV + + + K + V G P P +++ ++ + S
Sbjct: 385 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVR 438
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N PIT Y + + F + + +Y G +++ L P+
Sbjct: 439 LTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVN 490
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 491 YQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAF 550
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G G
Sbjct: 551 GPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKG 603
Query: 475 PESEVV 480
PE E V
Sbjct: 604 PEPESV 609
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 71 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 123
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 124 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 180
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 181 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 234
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 235 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 288
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 289 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 329
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 19 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 78
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 79 SGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 136
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 137 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 191
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 192 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 240
>gi|380788299|gb|AFE66025.1| neurofascin isoform 4 precursor [Macaca mulatta]
Length = 1169
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + +Y G +++ L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAVLR-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 695 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E E V
Sbjct: 808 EPESV 812
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 193/506 (38%), Gaps = 87/506 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 463 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 516
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 517 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 573
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P L
Sbjct: 574 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL-- 630
Query: 189 KITIAAHRNLQLR-------------CSAHTEELLDVAYIWTHNGVRIGNMDLNELE-TP 234
++T A R+++L EE +W + G+++ L +P
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP 690
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-GLPGGVQVVEVHKT 293
+N ++ + V S+ + ++ PP PG V+ K
Sbjct: 691 YVNYQFRVIAVNE------------VGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 738
Query: 294 SATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ I WT + + P Y + R WN+ S +V+G+
Sbjct: 739 NMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTP---------- 788
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
V VP YE +V A N+ G G P S + D P AP+ + +S+
Sbjct: 789 ---VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQ 841
Query: 407 WEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIP 453
W + P Q Y +WR K+ F + L+ G+ V R+
Sbjct: 842 WNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR-----GV-VSRL- 894
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEV 479
F Y+ Y++++ +N G GP SE
Sbjct: 895 --FPYSNYKLEMVVVNGRGDGPRSET 918
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|37360078|dbj|BAC98017.1| mKIAA0756 protein [Mus musculus]
Length = 1251
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 214/488 (43%), Gaps = 52/488 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 441 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 492
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+YQC N+ ++A + VL + P S + + + Y + C +P P
Sbjct: 493 VYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIP 548
Query: 120 KFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 549 TLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 606
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETP 234
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 607 -KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS- 664
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
L I + D G Y C+ + + + K + V G P P +++ ++ + S
Sbjct: 665 --------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERS 716
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ W G N PIT Y + + F + + R+ G +++ + L P+
Sbjct: 717 VRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNSAVLH-LSPY 768
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 769 VNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATS 828
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVG 472
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G
Sbjct: 829 AFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFG 881
Query: 473 PGPESEVV 480
GPE + +
Sbjct: 882 KGPEPDTI 889
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 141 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 197
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 198 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 256
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 257 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 316
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 317 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 372
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ N+ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 373 -GDLPSNKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 425
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ NV E D Y
Sbjct: 351 DLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNV-------SEEDSGEYF 403
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 404 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 460
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 461 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 514
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 515 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 568
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 569 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 609
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 299 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 358
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 359 SGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 416
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 417 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 471
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 472 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 520
>gi|149058632|gb|EDM09789.1| neurofascin, isoform CRA_e [Rattus norvegicus]
Length = 1174
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 210/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NG+ L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y C+ + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ + L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 695 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E E V
Sbjct: 808 EPETV 812
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|297483860|ref|XP_002693952.1| PREDICTED: neurofascin isoform 2 [Bos taurus]
gi|296479434|tpg|DAA21549.1| TPA: neurofascin homolog (chicken) isoform 2 [Bos taurus]
Length = 1173
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 209/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 363 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 414
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 415 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 473
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 474 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 530
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L +A W + + I N E ++
Sbjct: 531 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDS---- 586
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 587 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 641
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ L P+ Y
Sbjct: 642 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLR-LSPYVNY 693
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 694 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 753
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 754 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 806
Query: 476 ESEVV 480
E + V
Sbjct: 807 EPDTV 811
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 46 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 102
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 103 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 161
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 162 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 221
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 222 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 278
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 279 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 330
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 331 KMGSIRHTISVRVKAAP 347
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 273 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 325
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 326 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 382
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 383 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 436
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 437 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 490
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 491 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 531
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 271 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 328
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 329 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 385
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 386 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 441
Query: 281 L 281
+
Sbjct: 442 M 442
>gi|348517086|ref|XP_003446066.1| PREDICTED: neural cell adhesion molecule L1-like [Oreochromis
niloticus]
Length = 1548
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 222/484 (45%), Gaps = 47/484 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W NG+LL ++++ R + L ++ +N D A+YQC AKN
Sbjct: 616 CQADGVPRPSITWRINGQLLTE----VDEEPRRTVTGGTLIMKDVNIG-DTAVYQCEAKN 670
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY---AGEGGNVTIFCNPEAAPKPKFVWKKD- 126
+ + L V+ L P L + + +G +V + C +P+P+ W ++
Sbjct: 671 GHGSILLNTYLYVVELPPQI----LSPDGFIYNVTKGRDVALHCESFGSPRPRVTWDRED 726
Query: 127 -GNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
G ++ R I NG L +S VS +DSG Y C+ N + +K + + PS
Sbjct: 727 TGALLSDPLLYPRISILTNGTLKLSDVSHNDSGEYICSVQNTNISITAK---LDVFRPSE 783
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPN--INID 239
P + + + L C T+ L D +W + GN L E + +
Sbjct: 784 ILTGPQAVRVVQGESAFLDCDVDTDPRLRDYQVVW-----KKGNRKLEETSVDDKYTFLK 838
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L++T+ D+ EY C V + V + + ++ V P P G+ + S T+ W
Sbjct: 839 NNTLKVTDVQLNDSTEYSCEVITKVDNVIAQGSITVVAKPDPPSGLTLSNAEGVSVTLSW 898
Query: 300 TDGATNGRPITHYKIIARTNWNS-----TWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ G ++ PIT + I AR +++ TW +E+ + G +E L P+
Sbjct: 899 SPGLSHNSPITEFIIQAREEYHTEERKWTW---------EELKKVPGDFN-HVELTLHPF 948
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
STY F+VIA NE+G S+PS ++TP P P+ + + G L I+W+ + +
Sbjct: 949 STYRFRVIAINEVGRSRHSNPSDHHSTPPAAPSINPTGVRSNSAEPGTLIITWDEIDKRF 1008
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N + Y++ WR+ + + + G V + + YT +E+KV+++N +G G
Sbjct: 1009 HNGQDFQYEVLWREADGSNVNWNS----GRVRSPPFIVNNTGTYTPFEIKVRSVNALGGG 1064
Query: 475 PESE 478
P+ E
Sbjct: 1065 PDPE 1068
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 146
KP F S+ A +G +VT+ C P+ P PK WKK ++ + I + L
Sbjct: 502 KPEFFHHRNHSQISALKGNSVTLECLPKGLPTPKVEWKKKDGVLADTTGQVINFDRWLHF 561
Query: 147 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 206
++ DD G Y C A+N HG ++ + + Y+ + P + ++L C A
Sbjct: 562 DSITLDDDGEYECKASNAHG-SITRSFTVTVEAAPYWVKEPQNLMYTPGETVRLDCQA-- 618
Query: 207 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ + + W NG + +D E P + GG L + + + D Y+C K+ G
Sbjct: 619 DGVPRPSITWRINGQLLTEVD----EEPRRTVTGGTLIMKDVNIGDTAVYQCEAKNGHGS 674
Query: 267 ISTKTTV-IVEGPPGL 281
I T + +VE PP +
Sbjct: 675 ILLNTYLYVVELPPQI 690
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 109/291 (37%), Gaps = 38/291 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD--PAM 63
D CEA G P T+ W ++GEL SET + T+R N D
Sbjct: 326 DFNLACEATGNPTPTFRWLKDGELFGSET------------EGSGTLRGDNSSLDMLEGE 373
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y+C A N L T + A + +P K+ + E G ++ + CNP + P +
Sbjct: 374 YRCYASNSLGTAMTQAVKVNVEPQPVLMKQQVMREQ-GDVGQSMVLSCNPPESSPPPSIH 432
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATNVHGMDESKGRLIVLHGP 180
+ N+ I R I +G L + + D Y C A + + +L
Sbjct: 433 WMNMNLMHITRSERVTIGLDGKLYFANLMESDKKKDYICHA-------QYREARTILPAT 485
Query: 181 SYYEQLPPKITIA--------AHRNLQ----LRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ + P ++A HRN L+ ++ T E L + + L
Sbjct: 486 AVSLSVKPSNSVAHGGKPEFFHHRNHSQISALKGNSVTLECLPKGLPTPKVEWKKKDGVL 545
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ IN D L + + D GEYEC + G I+ TV VE P
Sbjct: 546 ADTTGQVINFD-RWLHFDSITLDDDGEYECKASNAHGSITRSFTVTVEAAP 595
>gi|19924211|ref|NP_446361.1| neurofascin isoform 3 precursor [Rattus norvegicus]
gi|16903210|gb|AAL27854.1| neurofascin 155 kDa isoform [Rattus norvegicus]
Length = 1174
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 210/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NG+ L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y C+ + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ + L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 695 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E E V
Sbjct: 808 EPETV 812
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|237858627|ref|NP_001153787.1| neurofascin isoform 4 precursor [Rattus norvegicus]
Length = 1157
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 210/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NG+ L S + D +D ++ R A
Sbjct: 347 DGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 398
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 399 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 457
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 458 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 514
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 515 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 570
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y C+ + + + K + V G P P +++ ++ + S +
Sbjct: 571 -----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 625
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ + L P+ Y
Sbjct: 626 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYVNY 677
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 678 QFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFG 737
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 738 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 790
Query: 476 ESEVV 480
E E V
Sbjct: 791 EPETV 795
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 223 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 278
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 279 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 331
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 257 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 310 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 366
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 367 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 421 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 474
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 475 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 205 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 265 SGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 322
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 323 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGDPLQSAPPN-- 377
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 378 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 426
>gi|338724586|ref|XP_001489278.3| PREDICTED: neurofascin [Equus caballus]
Length = 1169
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 209/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRASGNPKPTIQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIHKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W P+
Sbjct: 695 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETRESWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E + V
Sbjct: 808 EPDTV 812
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMKR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W + I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSTMDPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPHNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRASGNPKPTIQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIHKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 92/248 (37%), Gaps = 35/248 (14%)
Query: 46 QDNVLTIRYL--NPERD------PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLE 96
Q N T++ L +P D P MY R V PSF +
Sbjct: 219 QKNAFTLKVLTNHPHNDSSLRNHPDMYSARG--------------VAERTPSFMYPQGTA 264
Query: 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDS 154
S G ++ + C P P W K G + S + FEN N L I+ VS +DS
Sbjct: 265 SSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDS 322
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A+N G + V P Y+ P + +A + +L C A +
Sbjct: 323 GEYFCLASNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRASGNPKPTIQ- 380
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV- 273
W NG + + N PN + G + + + Y+C + G + V
Sbjct: 381 -WMVNGEPLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVS 435
Query: 274 IVEGPPGL 281
+++ PP +
Sbjct: 436 VLDVPPRM 443
>gi|253314410|ref|NP_001156578.1| neural cell adhesion molecule L1-like protein precursor [Danio
rerio]
gi|189313742|gb|ACD88870.1| camel [Danio rerio]
Length = 1154
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 223/489 (45%), Gaps = 47/489 (9%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDP 61
+D+ C A G P T +W RNG+ PL+D + D ++ ++ ++D
Sbjct: 350 SDIHINCSATGKPQPTITWKRNGK-------PLDDFPSTHHKMLDDRIIILKA--EQKDT 400
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPK 120
A+YQC A N+ + ++A + V+ P R LE T G+ +V + CN ++P
Sbjct: 401 AVYQCEASNKHGSLLANANVLVMNHPPLILTRNYLEYATMLGK--SVIMDCNVFSSPPAT 458
Query: 121 FVWKKD---GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W+++ G++ G R + +NG+L I V +D G Y C A N G L +
Sbjct: 459 LNWRREDPEGSV--DGERYSLLKNGSLQIHKVEMEDMGQYKCLANNSEGSASITTELFIK 516
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPN 235
E P + + +L C + L ++ ++W +G+ I + T
Sbjct: 517 DSTRIVEA-PQDMKVIRGSVAELECQVECDPSLRRELEFVWLKDGINILSNSSERYFT-- 573
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
D G+L+I N S +D G Y C+V++++ + + + V P P + + ++ S
Sbjct: 574 ---DEGILQIFNVSHSDQGNYTCIVRTSLDQDTASAYITVLDVPDPPVELLLSDLKDRSV 630
Query: 296 TIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
+ W + + + PIT + I ++W W K++ R + RK S L
Sbjct: 631 KLHWVNTSDHNSPITEFIIQYEESHWEPEKW---------KDLLRVSSRK-FSAPLALYC 680
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
Y+F+VIA NE+G PS PS +Y TP P + P I G + ISWEPL
Sbjct: 681 HINYQFRVIAVNEIGRSHPSMPSGRYKTPPCAPDRNPENIKIEGHLPHQMDISWEPLLPV 740
Query: 414 KQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N P + YK+ +R + ++ + +K + V V P+ + YEVK+QA N G
Sbjct: 741 EHNGPGLEYKLSYRLLGVEDSWKEQMVKRHSFV---VRDTPT---FVPYEVKIQAFNRHG 794
Query: 473 PGPESEVVT 481
P +VVT
Sbjct: 795 WAPGPKVVT 803
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 103/259 (39%), Gaps = 17/259 (6%)
Query: 26 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLT 85
+G L S TL + D Y + IR + + P M K A++ V
Sbjct: 184 SGNLYFSNTLVSDSHDDYCCFASFFKIRTI--VQKPRMVLKVKPVDAKQEDGDAKI-VQE 240
Query: 86 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNL 144
KPS S T+ +G + + C E P P+ W K I G +R +N G L
Sbjct: 241 RKPSILVPSSHSTTFLKKGEELELECIAEGLPTPEVEWIK---IWGDLPKRTQIKNFGKL 297
Query: 145 LISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA-AHRNLQLRC 202
L P + +D G Y C A N HG D ++ V PS+ ++ P K +A ++ + C
Sbjct: 298 LTIPNIREEDEGKYMCKAKNQHGEDVHHFQVEVEEPPSWQKE-PLKSQLAWIGSDIHINC 356
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
SA + + W NG L++ + + + + I A D Y+C +
Sbjct: 357 SATGKPQPTIT--WKRNG-----KPLDDFPSTHHKMLDDRIIILKAEQKDTAVYQCEASN 409
Query: 263 TVGKISTKTTVIVEGPPGL 281
G + V+V P L
Sbjct: 410 KHGSLLANANVLVMNHPPL 428
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 131/355 (36%), Gaps = 69/355 (19%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ--- 65
+ CEA G P T+ W ++G + P + ++N T N ++D YQ
Sbjct: 53 FKCEAKGNPRPTFRWTKDGMDFDPHKDP-----QVTTEENTGTFEIPN-KKDKVKYQGKY 106
Query: 66 -CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW 123
C A N+L T S ++ + P F K +E EG +V + CN P+ P + W
Sbjct: 107 RCYASNKLGTATSEEAEFIVPMVPKFPKEKIEP-IVVTEGDSVVLECNPPQGIPPWQLYW 165
Query: 124 -KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKGRLIVLHGP 180
D I R + +GNL S DS C + + K R+++ P
Sbjct: 166 MTNDLRHIEQNERVSMGLSGNLYFSNTLVSDSHDDYCCFASFFKIRTIVQKPRMVLKVKP 225
Query: 181 S-----------YYEQLPPKITIAAH--------RNLQLRCSAHTEELLDVAY--IWTHN 219
E+ P + ++H L+L C A +V + IW
Sbjct: 226 VDAKQEDGDAKIVQERKPSILVPSSHSTTFLKKGEELELECIAEGLPTPEVEWIKIWGDL 285
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
R I G LL I N D G+Y C K+ G+ V VE PP
Sbjct: 286 PKRT-----------QIKNFGKLLTIPNIREEDEGKYMCKAKNQHGEDVHHFQVEVEEPP 334
Query: 280 GL---PGGVQVV----EVH-------KTSATIQWTDGATNGRPI-----THYKII 315
P Q+ ++H K TI W NG+P+ TH+K++
Sbjct: 335 SWQKEPLKSQLAWIGSDIHINCSATGKPQPTITW---KRNGKPLDDFPSTHHKML 386
>gi|410986309|ref|XP_003999453.1| PREDICTED: neurofascin isoform 5 [Felis catus]
Length = 1175
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 209/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 365 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 416
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 417 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 475
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 476 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 532
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 533 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 588
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 589 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 643
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ L P+ Y
Sbjct: 644 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNY 695
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W P+
Sbjct: 696 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFG 755
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 756 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 808
Query: 476 ESEVV 480
E + V
Sbjct: 809 EPDTV 813
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 48 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 105 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 163
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 164 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 223
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 224 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTASSQMVLRGMDLVLEC 280
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 281 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 332
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 333 KMGSIRHTISVRVKAAP 349
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 275 DLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 327
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 328 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 384
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 385 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 438
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 439 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 492
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 493 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 533
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLVLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 281 L 281
+
Sbjct: 444 M 444
>gi|410986301|ref|XP_003999449.1| PREDICTED: neurofascin isoform 1 [Felis catus]
Length = 1170
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 209/485 (43%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 365 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 416
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 417 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 475
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 476 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 532
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 533 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 588
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 589 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 643
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ L P+ Y
Sbjct: 644 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNY 695
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W P+
Sbjct: 696 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFG 755
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G GP
Sbjct: 756 PNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 808
Query: 476 ESEVV 480
E + V
Sbjct: 809 EPDTV 813
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 48 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 105 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 163
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 164 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 223
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 224 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTASSQMVLRGMDLVLEC 280
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 281 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 332
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 333 KMGSIRHTISVRVKAAP 349
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 275 DLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 327
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 328 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 384
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 385 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 438
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 439 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 492
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 493 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 533
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLVLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 281 L 281
+
Sbjct: 444 M 444
>gi|339238857|ref|XP_003380983.1| putative fibronectin type III domain protein [Trichinella spiralis]
gi|316976074|gb|EFV59418.1| putative fibronectin type III domain protein [Trichinella spiralis]
Length = 1127
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 218/495 (44%), Gaps = 65/495 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPERDPAMYQCRA 68
C+ FG P WF NG+ + + R + N +L I LN + D A+YQC A
Sbjct: 285 CKVFGDPQPIVRWFINGQPITD----FSENSRRLLSSNGEILKIVNLNHDVDTAVYQCNA 340
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVW--KK 125
N L +++A + V P F E E G +V + C+ EAAPKP+ W K
Sbjct: 341 SNPLGYIFANAFINVYAHAPRFTTE--EDEIVPTILGQDVDLDCSVEAAPKPEVKWMDNK 398
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG----PS 181
+ I S R I N L IS V+ D+G+Y C N +G++ +K +L V P+
Sbjct: 399 EREIKDSRPRFHILSNHTLRISAVTAKDAGLYFCHVNNKYGLNRAKRKLEVYSMFQPFPT 458
Query: 182 YY----------------EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
++ E P K I A+ L C A ++ L++ Y+W + + + N
Sbjct: 459 FHKFKAILSLIEATQFLVELKPAKAIIDANSKFNLFCEAKADDRLEIEYLWYRDQILLNN 518
Query: 226 MDLN--ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283
N ++ PN LEI +G Y CV K+ V + +K +IV+ P P
Sbjct: 519 ASDNAYRIDIPN------KLEIVKPRGRHSGIYTCVSKTKVDTLKSKMQLIVKDVPESPK 572
Query: 284 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGR 342
+ + + ++ A ++W N PIT Y + T ++ + W + ++ D+ T
Sbjct: 573 LLSI-DCNERRALVRWAAAYDNHEPITKYTVEYETAFHKNVWIPA---LTEEQTDQKTF- 627
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
EA I L PW Y F+VIA N+ G G P TP PY P + G + +
Sbjct: 628 -EAVIN--LSPWVNYTFRVIASNKRGAGTPGYLKATCQTPPSYPYTNPKNVSAAGTEKDN 684
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKND----TEFQSET-LKEYGNVGIAVVRIPSEFY 457
L P+ +E+ N Y I +R EF+ E L+++ V I +
Sbjct: 685 L-----PMSKEECNGERFRYLIRYRLDEPGTSWEEFEVEDPLQDH-------VVIRDQPT 732
Query: 458 YTEYEVKVQAINDVG 472
+ +Y V+VQA+N +G
Sbjct: 733 FRKYVVQVQAVNAIG 747
>gi|344277016|ref|XP_003410301.1| PREDICTED: neurofascin-like isoform 2 [Loxodonta africana]
Length = 1174
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 207/480 (43%), Gaps = 46/480 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 369 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 420
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 421 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNG 479
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ L V P+
Sbjct: 480 Q--GSNLDGGNYHVYENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEV-KDPTRIY 536
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
Q+P + +QL C + L + W + + +GN E ++
Sbjct: 537 QMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGNRMKKEDDS--------- 587
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + D G Y C+ + + + K + V G P P +++ ++ + S + W G
Sbjct: 588 LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPG 647
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y + + F + + ++ G +++ L P+ Y+F+VI
Sbjct: 648 DDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVI 699
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G PS PS +Y T P P+ + G G + ++ I+W P+ PN+ Y
Sbjct: 700 AINEVGSSHPSLPSERYRTSGAAPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRY 759
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ WR++ ET + NV + R + Y YE++VQA ND G GPE + V
Sbjct: 760 IVKWRRR-------ETRDTWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTV 812
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSHKAKFENFN---KALRITNISEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ N+ E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSHKAKFENFNKALRITNI-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEVKDP 532
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ +S +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPS--HKAKFENFNKALRITNISEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|109474014|ref|XP_001077843.1| PREDICTED: cell adhesion molecule with homology to L1CAM [Rattus
norvegicus]
Length = 1225
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 214/485 (44%), Gaps = 44/485 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
CEA G P T W NG LP+E+ D F ++ ++ L P A+YQC
Sbjct: 367 CEAEGEPQPTIKWRVNG-------LPIENHPFPGDVMFPRE--ISFTNLQPNHT-AVYQC 416
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWK- 124
A N T ++A + V+ + P + + E+ ET G + + C A+PK VW+
Sbjct: 417 EASNIHGTILANANIDVVDVVPLIQTKNEENYETVVGY--SAFLHCEYFASPKATVVWEV 474
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
D GGR ENG L I + +D+G YSC N G L + + +
Sbjct: 475 ADETHPLEGGRYHTHENGTLEIERTTEEDAGSYSCWVDNTMGKAVITANLDIRNA-TKLR 533
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
P I L+L C + + L + W+ +G ++N E I IDG
Sbjct: 534 VFPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEA---FEMNGTEDGRIVIDGAN 590
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I+N S D G Y C ++ + S KT V V G P P + + E S + W G
Sbjct: 591 LTISNISGEDQGIYSCSAQTALDSTSEKTQVTVLGVPDPPRNLLLSERQNRSVRLSWEAG 650
Query: 303 ATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
+ I+ Y + N W +E+ R G +E + L P+ Y+F+
Sbjct: 651 DDHNSKISEYIVEFEGNREEPGKW---------EELTRVRG-EETDVVLPLAPYVRYQFR 700
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE-PLPREKQNAPN 419
V A NE+G S PS + TP P + P I + ++ I W PL +QN P
Sbjct: 701 VTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQASQPKEMIIKWGCPLKSMEQNGPG 760
Query: 420 IYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GPE +
Sbjct: 761 LEYRVSWKPQGAPEEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINQLGSGPEPQ 814
Query: 479 VVTIW 483
VT++
Sbjct: 815 PVTLY 819
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 189/499 (37%), Gaps = 68/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P T W + ET PLE RY +N E D Y C N
Sbjct: 460 CEYFASPKATVVW-----EVADETHPLEG-GRYHTHENGTLEIERTTEEDAGSYSCWVDN 513
Query: 71 QLKTRYSSAQL--RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ +A L R T F K P +++ E C+ K W KDG
Sbjct: 514 TMGKAVITANLDIRNATKLRVFPKNPRIPKSHVLEL-YCESQCDSHLKHSLKLSWSKDGE 572
Query: 129 II---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G+ R + + NL IS +S +D GIYSC+A K ++ VL P
Sbjct: 573 AFEMNGTEDGRIVIDGANLTISNISGEDQGIYSCSAQTALDSTSEKTQVTVLGVPD---- 628
Query: 186 LPPK-ITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
PP+ + ++ +N +R S H ++ + YI G R EL +
Sbjct: 629 -PPRNLLLSERQNRSVRLSWEAGDDHNSKISE--YIVEFEGNREEPGKWEEL----TRVR 681
Query: 240 GGLLEITNASFADAGEYECVVKST--VGKI-STKTTVIVEGPPGLPG----GVQVVEVHK 292
G ++ A Y+ V + VGK S++ + E PP P ++V
Sbjct: 682 GEETDVV-LPLAPYVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQASQP 740
Query: 293 TSATIQWTDGATNGRPITHYK-----IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
I+W G P+ + + R +W E + V +T R
Sbjct: 741 KEMIIKW------GCPLKSMEQNGPGLEYRVSWKPQ--GAPEEWEEETVTNHTLR----- 787
Query: 348 ENVLVP--WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP--SRIGGGGGKIGDL 403
V+ P ++ Y+ +V A N+LG G P Y+ D P AP R+ + +
Sbjct: 788 --VMTPTVYAPYDVQVQAINQLGSGPEPQPVTLYSG-EDYPSTAPVIHRVDVMNSTL--V 842
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYT 459
++W +P+E + Y+I W K KE + + R +PS ++
Sbjct: 843 KVTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLEPFS 902
Query: 460 EYEVKVQAINDVGPGPESE 478
E+ + V A N G GPESE
Sbjct: 903 EFHLTVLAYNSKGAGPESE 921
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+G + + C E P P+ W K G+ + G L I VS D G Y CTA
Sbjct: 269 KGDTLLLECFAEGLPTPQIEWSKLGSELPKGRATIEIHEKTLKIENVSYQDRGNYRCTAN 328
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N+ G S +++ P +++ P + N L C A E + W NG+
Sbjct: 329 NLLG-KASHDFHVIVEEPPRWKKKPQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGLP 385
Query: 223 IGN 225
I N
Sbjct: 386 IEN 388
>gi|345797902|ref|XP_003434374.1| PREDICTED: neurofascin [Canis lupus familiaris]
Length = 1169
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G ++I L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAILQ-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W P+
Sbjct: 695 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + N + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETRETWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E + V
Sbjct: 808 EPDTV 812
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---KSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAHR-----NLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGTDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 93/248 (37%), Gaps = 35/248 (14%)
Query: 46 QDNVLTIRYL--NPERD------PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLE 96
Q N T++ L NP D P MY R V PSF +
Sbjct: 219 QKNAFTLKVLTNNPYNDSSLRNHPDMYSARG--------------VAERTPSFMYPQGTA 264
Query: 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDS 154
S G ++ + C P P W K G + S + FEN N L I+ VS +DS
Sbjct: 265 SSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDS 322
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A+N G + V P Y+ P + +A + +L C A+ V
Sbjct: 323 GEYFCLASNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ- 380
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV- 273
W NG + + N PN + G + + + Y+C + G + V
Sbjct: 381 -WMVNGEPLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVS 435
Query: 274 IVEGPPGL 281
+++ PP +
Sbjct: 436 VLDVPPRM 443
>gi|344277020|ref|XP_003410303.1| PREDICTED: neurofascin-like isoform 4 [Loxodonta africana]
Length = 1169
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 207/480 (43%), Gaps = 46/480 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 369 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 420
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 421 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNG 479
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ L V P+
Sbjct: 480 Q--GSNLDGGNYHVYENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEV-KDPTRIY 536
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
Q+P + +QL C + L + W + + +GN E ++
Sbjct: 537 QMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGNRMKKEDDS--------- 587
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I + D G Y C+ + + + K + V G P P +++ ++ + S + W G
Sbjct: 588 LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRPDRPRDLELTDLAERSVRLTWIPG 647
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y + + F + + ++ G +++ L P+ Y+F+VI
Sbjct: 648 DDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVI 699
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G PS PS +Y T P P+ + G G + ++ I+W P+ PN+ Y
Sbjct: 700 AINEVGSSHPSLPSERYRTSGAAPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRY 759
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ WR++ ET + NV + R + Y YE++VQA ND G GPE + V
Sbjct: 760 IVKWRRR-------ETRDTWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTV 812
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSHKAKFENFN---KALRITNISEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ N+ E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSHKAKFENFNKALRITNI-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEVKDP 532
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ +S +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPS--HKAKFENFNKALRITNISEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|345797908|ref|XP_856076.2| PREDICTED: neurofascin isoform 5 [Canis lupus familiaris]
Length = 1174
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 208/485 (42%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRL 642
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G ++I L P+ Y
Sbjct: 643 TWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAILQ-LSPYVNY 694
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W P+
Sbjct: 695 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFG 754
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + + N + R + Y YE++VQA ND G GP
Sbjct: 755 PNLRYIVKWRRR-------ETRETWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGP 807
Query: 476 ESEVV 480
E + V
Sbjct: 808 EPDTV 812
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---KSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAHR-----NLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGTDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 93/248 (37%), Gaps = 35/248 (14%)
Query: 46 QDNVLTIRYL--NPERD------PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLE 96
Q N T++ L NP D P MY R V PSF +
Sbjct: 219 QKNAFTLKVLTNNPYNDSSLRNHPDMYSARG--------------VAERTPSFMYPQGTA 264
Query: 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDS 154
S G ++ + C P P W K G + S + FEN N L I+ VS +DS
Sbjct: 265 SSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDS 322
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A+N G + V P Y+ P + +A + +L C A+ V
Sbjct: 323 GEYFCLASNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ- 380
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV- 273
W NG + + N PN + G + + + Y+C + G + V
Sbjct: 381 -WMVNGEPLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVS 435
Query: 274 IVEGPPGL 281
+++ PP +
Sbjct: 436 VLDVPPRM 443
>gi|1305527|gb|AAA99159.1| L1-like cell adhesion molecule antigen E587 [Carassius auratus]
Length = 1232
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 217/481 (45%), Gaps = 47/481 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCR 67
C+A G+P +W NG P+ D R + L + + D A+Y
Sbjct: 323 CQAEGIPTPNITWSMNG-------APIAGTDPDPRRHVSSGTLILTDVQIS-DTAVYHVE 374
Query: 68 AKNQLKTRYSSAQLRVLTLKPS-FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N+ + + V+ L P + L+ E A EG V + C +P+PK W+
Sbjct: 375 ATNKHGNILINTHVHVVELPPQILTEDDLKYE--ATEGQTVLLQCRTFGSPQPKVDWQ-- 430
Query: 127 GNIIGSG-----GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG + +GNL IS VS +DS +Y+C+ + M S L+VL+
Sbjct: 431 --ITNSGPALANAKMSQTSDGNLQISDVSEEDSSMYTCSVS-TSNMSIS-AELVVLNRTK 486
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNM--DLNELETPNINI 238
+ P + + + L+C + +L I W + +I + D E+P+
Sbjct: 487 IVDP-PQDLRVLRGDDAVLQCRYTVDHMLKQPTIQWKKDKHKITSSANDDKYTESPD--- 542
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L+IT+ D+G Y C + + + +S +++V PG P +++ E + S T+
Sbjct: 543 --GSLKITDVQMEDSGIYSCEISTKLDSVSATGSIVVLDKPGSPHSLELSEKKERSVTLS 600
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
W GA N PI+ Y I + N + E+ R + +E L P+STY
Sbjct: 601 WMPGAENNSPISEYVIERKEKQNPGKGHWEEY-------RRVPQDITHLEIHLQPYSTYH 653
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V N +G EPS PS Y+TPA KP P + L I+W+ L + + N P
Sbjct: 654 FRVRGVNGIGMSEPSPPSESYSTPAAKPDMNPENVTSVSTDSNSLVITWQELEQRQFNGP 713
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
YKI+WR++ D+ + ++ + +V P F +++KVQA+N++G GPE +
Sbjct: 714 GFKYKIYWRQEGDSHW----MESSASNPPFIVEGPGTF--IPFQIKVQAVNELGAGPEPD 767
Query: 479 V 479
Sbjct: 768 A 768
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 8/179 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G +T+ C PE P P+ W++ + + R + L I VS D G Y+CTA N
Sbjct: 226 GQTLTLECIPEGLPTPEVQWERMDSPLSPARVRWLKYKRWLQIESVSEADDGEYTCTAQN 285
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + + V P Y+ + P A ++L C A E + W+ NG I
Sbjct: 286 SQGSVKHHYAVTVEAAP-YWTRRPENHLYAPGETVRLDCQA--EGIPTPNITWSMNGAPI 342
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
D + P ++ G L +T+ +D Y + G I T V +VE PP +
Sbjct: 343 AGTDPD----PRRHVSSGTLILTDVQISDTAVYHVEATNKHGNILINTHVHVVELPPQI 397
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 120/300 (40%), Gaps = 54/300 (18%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-----ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
D+ CEA G P ++ W ++G ELL+S TL ED++ L+P +
Sbjct: 31 DVILACEASGDPAPSFRWVKDGKEFKRELLSSGTLTAEDKEE------------LHPIQ- 77
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y+C + L T S + P+ K + EG + ++CN P+++ P
Sbjct: 78 -GSYRCYVMS-LGTAVSDLAQLITEPIPTLAKEKRQKTRSFEEGDSAVLYCNPPKSSVTP 135
Query: 120 KFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRLIVL 177
K W I R +GNL + + +DS Y+C N H ++ S ++L
Sbjct: 136 KIHWMDMHWRHIPLNERVTTSLDGNLYFANLLVNDSREDYTC---NAHIINAS----VIL 188
Query: 178 HGPSYYEQLPPKITIAAHRNLQLR--CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
+ P ++ +R QL+ +H+ L+ T + G L TP
Sbjct: 189 PKERISISVTPSNSVLKNRRPQLQKPAGSHSSYLVLRGQTLTLECIPEG------LPTPE 242
Query: 236 IN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +D L L+I + S AD GEY C +++ G + V VE P
Sbjct: 243 VQWERMDSPLSPARVRWLKYKRWLQIESVSEADDGEYTCTAQNSQGSVKHHYAVTVEAAP 302
>gi|196016265|ref|XP_002117986.1| hypothetical protein TRIADDRAFT_62007 [Trichoplax adhaerens]
gi|190579459|gb|EDV19554.1| hypothetical protein TRIADDRAFT_62007 [Trichoplax adhaerens]
Length = 1083
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 219/494 (44%), Gaps = 46/494 (9%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAM 63
+D W C G D+ Y W+RNG+ ++ +Y + N LTIR+L+P D A+
Sbjct: 349 SDFIWPCSVSGF-DIKYKWYRNGQRISGS-------PQYNLHANGSLTIRHLSPS-DAAV 399
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y C+ N SS L V+ P+F K P T+ G N T+ C P+P +
Sbjct: 400 YSCQGYNNHSNIVSSGYLNVIVAAPTFIKSPYTQATFF-RGQNATLRCTVTGGPRPTVEY 458
Query: 124 KKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K+G I K NGNL+I V D+G+Y C A+N +G E G ++ +
Sbjct: 459 TKNGRTIDRQLHNKYTAQLNGNLIIHHVQDSDAGVYKCIASNRYGTAEVSGSAVIKIATT 518
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + L K + + L C + L+V + W G I + N++
Sbjct: 519 FTKSLT-KTFVRRPQGFILSCQIQKDPSLNVVFYWQKEGKNI----TTQKAVLNVHGLTT 573
Query: 242 LLEITNASFADAGEYECVVKSTV-----GKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L +++S D+G + C V + V S+ + V P P + +V+ +SA
Sbjct: 574 TLTYSSSSLGDSGRFSCFVATHVPFAGYETQSSSAMLTVHDIPDSPSDFRYNQVNASSAV 633
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWS 355
+ W G +N P+ Y + R N N N V +V + A+ V L P++
Sbjct: 634 LSWLPGNSNNSPLLRYGLTYRVNSNR-LSNDPWRVAINDVPPW-----ATFHRVNLSPYN 687
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPRE 413
Y FK+IA N +G +PS ++T D PY +P R G + I ++PL R+
Sbjct: 688 YYHFKLIAINGVG-SSKITPSLTFHTDVDIPYHSPGEFRASSGTADGAIIEIRYKPLSRD 746
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLK---EYGNVG-IAVVRIPSEFYYTEYEVKVQAIN 469
+ N P+IY N EF+ + + + N+G R+ T Y+++++ N
Sbjct: 747 EMNGPHIY--------NLLEFKPQAISSSWSFINIGNNGSYRLTGVLENTVYKLRLRPFN 798
Query: 470 DVGPGPE-SEVVTI 482
D+G G E + VT+
Sbjct: 799 DIGLGKEWTHTVTV 812
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 205/522 (39%), Gaps = 80/522 (15%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
Q + C + G P T W + L + +E R+ L ++Y+ E D
Sbjct: 258 QVRVILECISTGYPIPTILWQKKLGPLPNNRYSIEKFGRH------LVLKYIQ-EADAGE 310
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG-GNVTIFCNPEAAPKPKFV 122
YQC A + K +SA+LRV + R S T + G+ I+ + K+
Sbjct: 311 YQCIAFSGFKQVSASAKLRV-----AIDSRWKASITNTNQPIGSDFIWPCSVSGFDIKYK 365
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL-IVLHGPS 181
W ++G I + + NG+L I +S D+ +YSC N H S G L +++ P+
Sbjct: 366 WYRNGQRISGSPQYNLHANGSLTIRHLSPSDAAVYSCQGYNNHSNIVSSGYLNVIVAAPT 425
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + + T +N LRC+ V Y T NG R + L+ T +N G
Sbjct: 426 FIKSPYTQATFFRGQNATLRCTVTGGPRPTVEY--TKNG-RTIDRQLHNKYTAQLN---G 479
Query: 242 LLEITNASFADAGEYECVVK----------STVGKISTK-----TTVIVEGPPGLPGGVQ 286
L I + +DAG Y+C+ S V KI+T T V P G Q
Sbjct: 480 NLIIHHVQDSDAGVYKCIASNRYGTAEVSGSAVIKIATTFTKSLTKTFVRRPQGFILSCQ 539
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ + + W G+ IT K + + +T S +G +GR
Sbjct: 540 IQKDPSLNVVFYWQK---EGKNITTQKAVLNVHGLTTTLTYSSSSLGD-----SGRFSCF 591
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSP-QYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ VP++ YE + + + P SPS +YN A S + +
Sbjct: 592 VA-THVPFAGYETQSSSAMLTVHDIPDSPSDFRYNQ-----VNASSAV-----------L 634
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP--SEFY------ 457
SW LP N+P + Y + +R N ++ + +A+ +P + F+
Sbjct: 635 SW--LPGNSNNSPLLRYGLTYR-VNSNRLSNDPWR------VAINDVPPWATFHRVNLSP 685
Query: 458 YTEYEVKVQAINDVGPGPESEVVTIWHDPLVIISYVCQGDLK 499
Y Y K+ AIN VG + +T D V I Y G+ +
Sbjct: 686 YNYYHFKLIAINGVGSSKITPSLTFHTD--VDIPYHSPGEFR 725
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 65 QCRAKNQLKTR------YSSAQLRVLTLKPSFKKRPL----ESETYAGEGGNVTIFCNPE 114
+ R +NQ+ R +++ L + P+ +P+ E Y+ G V I C
Sbjct: 2 RIRRENQMMKRSLLAFVLATSTLALALHSPTITIQPIDFMNEHAIYSTGSGKVVIPCQTT 61
Query: 115 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
+ + W+ +GN I R KI + GNL ++ ++ D G Y C A+N++G S+
Sbjct: 62 GSGNITYAWRHNGNPIQLDDRIKILD-GNLSVANITASDDGKYICLASNLYGTSISREVT 120
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRC--SAHTEELLDVAYI-WTHNGVRIGNMDLNEL 231
+ + + I +++ + +LRC S T + + I WT + D
Sbjct: 121 LQVSVVHSLRNISENIIQSSYGSARLRCQISNQTTRMPKPSQIYWT------ASDDSRVP 174
Query: 232 ETPNINI---DGGLLEITNASFADAGEYECVV 260
ET +I I DG L+ I + G Y+C V
Sbjct: 175 ETTSIAINEYDGDLIFIAGWQ-NNTGSYKCNV 205
>gi|431913513|gb|ELK15188.1| Contactin-3 [Pteropus alecto]
Length = 888
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 196/429 (45%), Gaps = 52/429 (12%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ D Y+C A+N + +L KP + + P+E A E +++ C P
Sbjct: 213 QEDAGSYECIAENSRGRNAARGRL-TYYAKPHWVQ-PIEDVELAVED-SLSWQCRAGGKP 269
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
P + W KDG + R +I ENG L I+ +S D+G++ C A N HG+ +S L V
Sbjct: 270 TPSYRWLKDGAALALEERVQI-ENGALTIANLSVADAGMFQCVAENKHGLVQSSAELRVT 328
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P+ P + ++ ++ L C A + LL + W NG R D + + +
Sbjct: 329 E-PTRITVAPSDMDVSVGESVVLPCQARHDPLLRGTFTWYFNGARADAGD----DGAHFS 383
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
G L+ I N +GEY CVV++ V +S+ + V G PG P V+V E+ T+A +
Sbjct: 384 ASGDLM-IRNIQLKHSGEYVCVVQTAVESVSSAANLTVRGSPGPPENVKVEEITDTTAQL 442
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTW---FNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
W +GA N P+T Y + ART ++ W V E + GK R +E L PW
Sbjct: 443 SWREGADNRSPVTWYSVQARTPFSVGWQAATTVPEVIDGKT------RTATVVE--LRPW 494
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
YEF+V+A N++G GEPS PS + P+P E
Sbjct: 495 VEYEFRVVASNKIGGGEPSLPSEK------------------------------PVPEEL 524
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
Q+ Y + +R T++ +T+ + V + S ++ YEVKV N+ G G
Sbjct: 525 QSGEGFGYVVAFRPLGVTDW-IQTVVTSADTPRYVFKNESIVPFSLYEVKVGVYNNRGEG 583
Query: 475 PESEVVTIW 483
P S V T++
Sbjct: 584 PFSPVTTVF 592
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 175/474 (36%), Gaps = 49/474 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+W C A G P +Y W ++G L E +R I++ LTI L+ D M+QC
Sbjct: 259 LSWQCRAGGKPTPSYRWLKDGAALALE-------ERVQIENGALTIANLSVA-DAGMFQC 310
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWK 124
A+N+ SSA+LRV T P + + GE +V + C P + F W
Sbjct: 311 VAENKHGLVQSSAELRV-TEPTRITVAPSDMDVSVGE--SVVLPCQARHDPLLRGTFTWY 367
Query: 125 KDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G +G F +G+L+I + SG Y C S L V P
Sbjct: 368 FNGARADAGDDGAHFSASGDLMIRNIQLKHSGEYVCVVQTAVESVSSAANLTVRGSPGPP 427
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
E + + L R A + + +G + P + IDG
Sbjct: 428 ENVKVEEITDTTAQLSWREGADNRSPVTWYSVQARTPFSVGWQAATTV--PEV-IDGKTR 484
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
T EYE V + I G P LP V E ++ +
Sbjct: 485 TATVVELRPWVEYEFRV--------VASNKIGGGEPSLPSEKPVPEELQSGEGFGY---- 532
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
+ ++ + T+W + V + RY + E+ +VP+S YE KV
Sbjct: 533 -----VVAFRPLGVTDW------IQTVVTSADTPRYVFKNES-----IVPFSLYEVKVGV 576
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N G G P SP + ++P APSR+ ++ +SW +P + N + Y+
Sbjct: 577 YNNRGEG-PFSPVTTVFSAEEEPTAAPSRVSARSLSASEIRVSWGAVPWKLSNGHLLGYE 635
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ + D E S + + S + V+A N G GP S
Sbjct: 636 VRYWSSGDEESASTVTVAASETSATLGGLRSNL---AHHAAVRAFNSAGAGPFS 686
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 142 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 201
G L + ++D+G Y C A N G + ++GRL P + + + + +A +L +
Sbjct: 204 GVLEVPDFQQEDAGSYECIAENSRGRNAARGRLTYYAKPHWVQPI-EDVELAVEDSLSWQ 262
Query: 202 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
C A + +Y W +G + L E + I+ G L I N S ADAG ++CV +
Sbjct: 263 CRAGGKPT--PSYRWLKDGAALA---LEE----RVQIENGALTIANLSVADAGMFQCVAE 313
Query: 262 STVGKISTKTTVIVEGP 278
+ G + + + V P
Sbjct: 314 NKHGLVQSSAELRVTEP 330
>gi|395545762|ref|XP_003774767.1| PREDICTED: neural cell adhesion molecule L1 [Sarcophilus harrisii]
Length = 1248
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 211/474 (44%), Gaps = 32/474 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG ++ E L +D+ R +Q L + + P D + QC A+N
Sbjct: 347 CQVQGRPRPMVTWRING--ISLENLTRDDKLR--VQGGALILSNVQP-NDTMVTQCEARN 401
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L P+ P +S+TY +G + CN P P+ W +D
Sbjct: 402 KHGLLLANAYIFVVQL-PTKILTP-DSKTYREVQGSTAYLLCNAFGVPMPRIQWLTRDRA 459
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R F NG+L I + +D+G Y C A N + L V + ++ P
Sbjct: 460 TVLQDERFVPFANGSLAIRDLRINDTGSYFCEADNDQNTVAIQAHLQVKEA-TQIKKGPQ 518
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ N+ C + L++ W N I ++ + L I N
Sbjct: 519 NQIVKKGSNVNFMCQVSFDPSLEIQINWYWNDQNIKDI----FSDDKYILKEEELTIKNL 574
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
++D G Y CVVK+ + + K ++V G PG G V++ + + W+ + P
Sbjct: 575 DYSDQGNYSCVVKTALDSVEKKAALLVVGSPGPVGQVELYKQKDFQVQLSWSPAEEHNSP 634
Query: 309 ITHYKIIA--RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I Y I RT W ++ V G E S + L P+ Y F+V+A N+
Sbjct: 635 IEKYNIYFEDRTLDPGFWHQLAT-VPGNE---------TSTKLKLSPFIHYNFRVVASNK 684
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
G +PS S + TP P + PS + G G + ++ I+W PL N + Y++ W
Sbjct: 685 YGTSDPSPDSELFVTPKSVPEKNPSDVKGEGNETNNMVITWMPLKWMDWNGMELKYRVQW 744
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
R+KN++E+Q + V P+ + YE+KVQA+N+VG GP+ ++V
Sbjct: 745 RQKNESEWQEVMARA---PSFVVSNTPT---FVPYEIKVQAVNEVGKGPDPQIV 792
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 97/253 (38%), Gaps = 22/253 (8%)
Query: 25 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 84
+NG L + L + Y + L R + +++P + + N + R R
Sbjct: 182 QNGNLYFANVLTNDSHSDYICHAHFLGARTIM-QKEPIDLRVKPTNNMIYR------RPR 234
Query: 85 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN- 143
L P L S A G + + C E P P W N + +G R ++N N
Sbjct: 235 LLLP----EGLTSRLVALRGQPLVLECIAEGFPTPTIKWSYPSNQMQAG--RVTYQNFNK 288
Query: 144 -LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
L + V +D G Y C A N GM + + V P Y+ Q P + +A +L C
Sbjct: 289 TLRLVRVEEEDDGEYRCWAENTLGMAQHVYYVTVEAAP-YWLQEPESLVLAPGETARLNC 347
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
V W NG+ + N+ ++ + + GG L ++N D +C ++
Sbjct: 348 QVQGRPRPMVT--WRINGISLENLTRDD----KLRVQGGALILSNVQPNDTMVTQCEARN 401
Query: 263 TVGKISTKTTVIV 275
G + + V
Sbjct: 402 KHGLLLANAYIFV 414
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 111/302 (36%), Gaps = 50/302 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLP----LEDQDRYFIQDNVLTIRYLNPERDP 61
+++ CEA G P+V + W + + E P + + I N +
Sbjct: 47 EISLKCEASGKPEVQFRWTKENIHFSPEKEPGVITHMNSGSFTITGNNSNFAH----HYQ 102
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAP- 117
Y+C A N+L T S V P + K +P E E EG +V + CNP A+
Sbjct: 103 GTYRCFASNRLGTAMSHEIQLVAEGAPKWPKEKVQPFEVE----EGQSVVLPCNPPASVV 158
Query: 118 KPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNV----------- 164
+P+ W I R + +NGNL + V +DS Y C A +
Sbjct: 159 QPRIYWMNSRIFHIAQDERVTMGQNGNLYFANVLTNDSHSDYICHAHFLGARTIMQKEPI 218
Query: 165 -------HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 217
+ M + RL++ G L ++ + L L C A + + +
Sbjct: 219 DLRVKPTNNMIYRRPRLLLPEG------LTSRLVALRGQPLVLECIAEGFPTPTIKWSYP 272
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
N ++ G + N N L + D GEY C ++T+G V VE
Sbjct: 273 SNQMQAGRVTYQ-----NFN---KTLRLVRVEEEDDGEYRCWAENTLGMAQHVYYVTVEA 324
Query: 278 PP 279
P
Sbjct: 325 AP 326
>gi|95007729|dbj|BAE94190.1| contactin/TAG-1 cell adhesion molecule [Dugesia japonica]
Length = 1156
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 231/512 (45%), Gaps = 42/512 (8%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NPE 58
D + +T TC+A G P VT W+RN L+ + D + + N+ T +
Sbjct: 380 DIGSTITLTCQAIGRPLVTVQWYRNDLPLSKWLMKNPDARYNYTEGNITTALFTITGMKT 439
Query: 59 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
D AM C N + +L ++LKP+F K PL ++ G +V I C PE +P
Sbjct: 440 TDNAMIGCNIYNTFGRESAYIELFAVSLKPNFDKYPLLNKE-GLVGMDVIIPCKPEGSPA 498
Query: 119 PKFVWKKDGNI--------------IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164
P W +G I G I N NL I V G+Y+CTA NV
Sbjct: 499 PTITWSFNGGTLTLGPTNFDQILGKISCAGDICIMPNRNLFIKSVKTSHIGMYTCTAVNV 558
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 223
G S L V+ P + + N+ L C A LD+ Y W VR+
Sbjct: 559 LGTASSSAYLDVIPKLE-ISNFPVGRRVQVNSNVYLPCQAAGTPYLDIDYDWYFENVRLK 617
Query: 224 -GNMDLN-------ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
MDL+ + P G L+I N F D Y C V + + V
Sbjct: 618 FDRMDLDARRYDKSQFMRPYYRY-FGTLKIFNIQFYDEANYTCRVTTPFAVEVIPALIQV 676
Query: 276 EGPPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYKI-IARTNWNSTWFNVSEHVIG 333
GPPG+ GG+ V V T + T++WTDG +G PI Y++ ++R N W + + I
Sbjct: 677 LGPPGVGGGITVTPVVGTVNHTVEWTDGYDHGSPILWYRLEVSRVNVQQEWIILLDK-IN 735
Query: 334 KEVDRYTGRKEASIENVL----VPWST-YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
K ++ + N L +P +T + ++ A N G GEPSS S + T A P +
Sbjct: 736 KTSITPINKQNNLVRNQLSFSGLPANTNFRLRLFAANSFGLGEPSSQSEVFKTEAIPPQK 795
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET--LKEYGNVG 446
+P + GGGGK+G L I WEPL ++N N Y+I +++ + ++ S T L + + G
Sbjct: 796 SPQNVTGGGGKVGTLVIRWEPLLPLEENGDNFEYEIQYKEAKEVDWISYTGFLNKSLDNG 855
Query: 447 --IAVVR-IPSEFYYTEYEVKVQAINDVGPGP 475
+ V R +P+ Y +EVKV+A+N G GP
Sbjct: 856 KYLQVTRDLPANKDYLPFEVKVRAVNIKGAGP 887
>gi|350591360|ref|XP_003132375.3| PREDICTED: contactin-3 [Sus scrofa]
Length = 840
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 219/511 (42%), Gaps = 38/511 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P +W R S+ LP ++ + VL I E D Y+C A+N
Sbjct: 131 CFALGNPVPQINWRR------SDGLPFSNKIKLRKFSGVLEIPNFQQE-DAGSYECIAEN 183
Query: 71 QLKTRYSSAQLRVLTLKPS-----FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--- 122
+ +L +PS F L + Y + + +P
Sbjct: 184 SRGKNVARGRLTYYG-EPSLECIGFLAFALSIDCYREIDELFLRIGDADVSPAVHSTCIM 242
Query: 123 ---WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
++K +++ R +I ENG L IS ++ DSG++ C A N HG+ S L V+
Sbjct: 243 HCEFRKTSHLLNLDERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVAS 301
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD----LNELETPN 235
+ + P K I ++ W V + D + + + P+
Sbjct: 302 APDFSKTPMKKLIQVQVGSEVSLDCKPRASPRALSSWKKGDVLVQETDRYSVVQKDDGPH 361
Query: 236 I-----NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
+ G L I N +G Y C+V++ V +S+ +IV G PG P V+V E+
Sbjct: 362 LCREEGQESSGDLMIRNIQLKHSGRYVCMVQTEVDSVSSAADLIVRGSPGPPENVKVDEI 421
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
T+A + W +G N P+ Y + ART ++ W + + + +D G+ +
Sbjct: 422 TDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVE 476
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +L I+W+P+
Sbjct: 477 LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPV 536
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
P E QN Y + +R T + +T+ + V R S ++ YEVKV N+
Sbjct: 537 PEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNDSILPFSLYEVKVGVYNN 595
Query: 471 VGPGPESEVVTIW---HDPLVIISYVCQGDL 498
G GP S V ++ +P + S V L
Sbjct: 596 KGEGPFSPVTAVFSAEEEPTIAPSQVSANSL 626
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 184/478 (38%), Gaps = 58/478 (12%)
Query: 37 LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLE 96
L +R I++ LTI LN D M+QC A+N+ YSSA+L+V+ P F K P++
Sbjct: 253 LNLDERIQIENGALTISNLN-VTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKTPMK 311
Query: 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---------------N 141
G V++ C P A+P+ WKK ++ R + + +
Sbjct: 312 KLIQVQVGSEVSLDCKPRASPRALSSWKKGDVLVQETDRYSVVQKDDGPHLCREEGQESS 371
Query: 142 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 201
G+L+I + SG Y C S LIV P E + K+ QL
Sbjct: 372 GDLMIRNIQLKHSGRYVCMVQTEVDSVSSAADLIVRGSPGPPENV--KVDEITDTTAQLS 429
Query: 202 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CV 259
T+ V P + IDG T EYE V
Sbjct: 430 WKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEV-IDGKTHTATVVELNPWVEYEFRVV 488
Query: 260 VKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGR 307
+ +G K+ T+ V P + GG ++ I W + NG
Sbjct: 489 ASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGG----SRSELVITWDPVPEELQNGE 544
Query: 308 P---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
+ ++ + TNW + V + RY R ++ ++P+S YE KV
Sbjct: 545 GFGYVVAFRPLGVTNW------IQTVVTSPDTPRYVFRNDS-----ILPFSLYEVKVGVY 593
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N G G P SP + ++P APS++ ++ +SW +P + N + Y++
Sbjct: 594 NNKGEG-PFSPVTAVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAVPWKLSNGHLLGYEL 652
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
+ E S LK GNV A +R + S YYT V+A N G GP S V
Sbjct: 653 RYWNNGGEEESSSKLKVAGNVTSARLRGLKSNLAYYT----AVRAFNSAGTGPFSATV 706
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 24/205 (11%)
Query: 92 KRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLIS 147
K + S EG V + C P +++ + + + RR + E G+L I+
Sbjct: 7 KTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIA 66
Query: 148 PVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRN 197
V D G Y+C T TN + ++ G P Q P + A
Sbjct: 67 KVETSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGST 126
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRIGN-MDLNELETPNINIDGGLLEITNASFADAGEY 256
++L C A + + + + +G+ N + L + G+LEI N DAG Y
Sbjct: 127 VKLECFALGNPVPQINWRRS-DGLPFSNKIKLRKF--------SGVLEIPNFQQEDAGSY 177
Query: 257 ECVVKSTVGKISTKTTVIVEGPPGL 281
EC+ +++ GK + + G P L
Sbjct: 178 ECIAENSRGKNVARGRLTYYGEPSL 202
>gi|126308803|ref|XP_001378472.1| PREDICTED: protein sidekick-2 [Monodelphis domestica]
Length = 2258
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 211/484 (43%), Gaps = 39/484 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C+A GVP +W+++ +++ + L R+ + D L I L P+ D M+QC A+
Sbjct: 416 CQAKGVPSPITTWYKDAAVIDVKKL-----SRFRLHGDGSLQISGLVPD-DTGMFQCFAR 469
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N +S L V ++ P+ + PL+S +G +V + C AP+P W+K I
Sbjct: 470 NSAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERI 527
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V +
Sbjct: 528 LASGSIQLPRFTLLESGSLLISPTRISDAGSYTCLATNSRGVDEASADLVVW-ARTRITM 586
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + V Y+W +G +G +D TP + +D G L
Sbjct: 587 APQDQSVIKGTKAFMTCGVTHDPSVSVRYVWEKDGAILG-VD----STPRMRLDKNGSLH 641
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + S + W
Sbjct: 642 ISQTWSGDIGTYTCRVLSAGGNDSRSAYLRVRQLPHAPEHPVATLSTAERRSINLTWAKP 701
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ HY ++ + N+ W V+ VD EA+ V LVP +Y+F+
Sbjct: 702 FDGNSPLIHY-VLEMSENNAPW-----TVLLPNVD-----PEATSVMVKGLVPARSYQFR 750
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 751 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 810
Query: 421 YYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y I F +Q + N + + + +T YE+ V A N G G S
Sbjct: 811 GYIIRFCLAGLPVGYQ---FRNITNADVNNLLLEELIIWTNYEISVAAYNSAGLGVYSSK 867
Query: 480 VTIW 483
VT W
Sbjct: 868 VTEW 871
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 1033 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1089
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W V H + E D +
Sbjct: 1090 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLANEPDA----RSME 1143
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ N L P++ Y F++ N +G PS PS + T P AP + L +
Sbjct: 1144 VPN-LNPYTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPGNVTLRTASETSLWLR 1202
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K ++ +TL + RI E+ +
Sbjct: 1203 WMPLPEMEYNGNPESVGYKI---KYTRSDGHGKTLSH-----VVHDRIEREYTIEDLEEW 1254
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S++V
Sbjct: 1255 TEYRVQVQAFNAIGTGPWSQIV 1276
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G SSP + A P P + G L ++WEP P E QN
Sbjct: 1681 YEIRMSVYNAVGEGPSSSPQEVFVGEA-VPTAPPQNVAVHGATATQLDVTWEPPPLEAQN 1739
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1740 GDIQGYKIYFWEAQRRNSTERLKTLFLPENG------VKLKNLTGYTAYLVSVAAFNAAG 1793
Query: 473 PGPES 477
GP S
Sbjct: 1794 DGPRS 1798
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 135/383 (35%), Gaps = 60/383 (15%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 130 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 177
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+N++ + SF++ GE V + P+P+ W +D
Sbjct: 178 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA-VIKAPRISSFPQPQVTWFRD 236
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPS 181
G I R I + L+I D+G Y A N D + I L GP+
Sbjct: 237 GRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPA 296
Query: 182 YYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELET 233
I +A + + C A+ L+ + IW +GV + G D N
Sbjct: 297 DPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPVSGGVSDHNR--- 353
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
L I N ++ G YEC + S+V + + V PP ++ E
Sbjct: 354 --------RLTILNPKGSNTGYYECEAVLRSSSVPSVVRGAVLSVLEPPQF---IKEPER 402
Query: 291 HKTSATIQWTDGATNGR----PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
H T+ + D + PIT TW+ + + K++ R+ + S
Sbjct: 403 HITAEMEKVVDIPCQAKGVPSPIT------------TWYKDAAVIDVKKLSRFRLHGDGS 450
Query: 347 IE-NVLVPWSTYEFKVIAGNELG 368
++ + LVP T F+ A N G
Sbjct: 451 LQISGLVPDDTGMFQCFARNSAG 473
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
+ ++ I W+ G PIT Y I AR + W ++ I KEV YT + +
Sbjct: 1922 YSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-----I 1975
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
L +Y+F+VIA N+ GYG PSSPS + PA K
Sbjct: 1976 LKHGVSYDFRVIAVNDYGYGTPSSPS--QSVPAQK 2008
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T S V+ +
Sbjct: 1387 PGPPMGILFPEVRPTSVRLIWQPPAAPNGIILAYQITHRLN-TTTANTASVEVLTPSARQ 1445
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F+++A G+GE + D+P Q PS+ I
Sbjct: 1446 YTATG-------LKPESIYLFRIMAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVINQE 1497
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ ++ + N VV F
Sbjct: 1498 NVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGKWALHSSSVTHNATSFVVDRLKPF 1555
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V++ ND+G
Sbjct: 1556 --TSYKFRVKSTNDIG 1569
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D +E PN+N T SF + V S + S K + P PG V
Sbjct: 1138 DARSMEVPNLN------PYTFYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPGNVT 1190
Query: 287 VVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++W + NG P + YKI R++ + + HV+ ++R
Sbjct: 1191 LRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYTRSDGHGKTLS---HVVHDRIER--- 1244
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S T P P+ +
Sbjct: 1245 --EYTIED-LEEWTEYRVQVQAFNAIGTG-PWSQIVVGRTRESVPSSGPTNVSALATTSS 1300
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+ + W +P +N + YK+ +++K D++ Q + GN ++ ++ Y Y
Sbjct: 1301 SMLVRWNEIPEADRNGLVLGYKVVYKEK-DSDTQPQFWLVEGNSSLS-AQLTGLGRYVLY 1358
Query: 462 EVKVQAINDVGPGPES 477
E++V A +G G S
Sbjct: 1359 EIQVLAFTRIGDGTPS 1374
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 27/207 (13%)
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
V S + W G+ P+ +Y I R + W S V T + + +
Sbjct: 1499 VKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGKWALHSSSV--------THNATSFVVD 1550
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+++Y+F+V + N++G E S S T P +AP+ + + ISW+P
Sbjct: 1551 RLKPFTSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTILSVTPHTTTSVLISWQP 1610
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------------ 457
+K N + ++I +R+ + T++ N + S +
Sbjct: 1611 PAEDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLTQY 1670
Query: 458 -------YTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1671 ELDNLSKHKRYEIRMSVYNAVGEGPSS 1697
>gi|317418927|emb|CBN80965.1| Neural cell adhesion molecule L1-like protein [Dicentrarchus
labrax]
Length = 1395
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 224/506 (44%), Gaps = 60/506 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDP 61
+D+ C A G P T +W NG +PL++ +R + D +L +R D
Sbjct: 359 SDVLIKCSASGTPQPTITWRVNG-------VPLQEAPAANRKVLGDTIL-LRNAKAS-DS 409
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPK 120
A+YQC A N+ +T S+A + ++ L P + E E Y+ EG V + C ++P
Sbjct: 410 AVYQCEASNRHRTLLSNANIMIMNLPPMILTK--EGEDYSAVEGKGVMMHCKVFSSPPST 467
Query: 121 FVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W KD + G R + +NG+L I V + D+G Y+C A N G + ++ +
Sbjct: 468 VTWSKDDSSESVEGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEG-SSAIDTMLYVKD 526
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNIN 237
P+ P + I QL C A +E D+ +W + + I LN E
Sbjct: 527 PTRIVVPPEHLQILIGTTAQLSCLAEYDESFKNDIELLWEKDDMEIA---LNYTENSRYF 583
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP------------------- 278
++ G+L+I N S D G Y CV ++ V + + +IV G
Sbjct: 584 VEDGILQIINVSHWDQGVYTCVARTPVDQDTASAWLIVLGELTYQQYFCSQAKGSDTPNV 643
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEV 336
P P + + E S ++W G + T + I + W W KE+
Sbjct: 644 PDAPEYLVLSERKSKSVKLKWNPGDNHNSSTTEFIIEYEESQWEPGNW---------KEL 694
Query: 337 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 396
R G +++ L Y F+V N +G G S P+ +Y PA P + P I
Sbjct: 695 LRVPGNHNSAVLK-LHGNVDYCFRVSGVNSVGRGPSSEPTERYKPPAAAPDKNPENIKIE 753
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 455
G ++ I+WEPL + N P + YK+ +R+++ + ++Q +K + V V P+
Sbjct: 754 GHLAHEMDINWEPLLPIEHNGPGLEYKVSYRRQDLEEDWQEHMVKRHSFV---VKNTPT- 809
Query: 456 FYYTEYEVKVQAINDVGPGPESEVVT 481
+ YE+K+QA N+ G GP+ ++VT
Sbjct: 810 --FVPYEIKIQAKNNQGWGPDPKIVT 833
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 44/289 (15%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ DL C A G P W + G L + LE+ + I V + D
Sbjct: 269 EEDLKLECIAEGFPTPQVEWVKVGHRLPIKA-KLENHGKLLIVPRV-------EQEDSGK 320
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C+AKN L + +T++ P + P ES+ + G +V I C+ P+P
Sbjct: 321 YMCKAKNALG---EAVHYFTVTIEEPPEWVSEP-ESQ-LSMIGSDVLIKCSASGTPQPTI 375
Query: 122 VWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W+ +G + RK+ + +L+ DS +Y C A+N H S +++++
Sbjct: 376 TWRVNGVPLQEAPAANRKVLGD-TILLRNAKASDSAVYQCEASNRHRTLLSNANIMIMN- 433
Query: 180 PSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE- 230
LPP I + + + + C + V W+ + D +E
Sbjct: 434 ------LPPMILTKEGEDYSAVEGKGVMMHCKVFSSPPSTVT--WSKD-------DSSES 478
Query: 231 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+E P + D G LEI + D G+Y C+ K+T G + T + V+ P
Sbjct: 479 VEGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEGSSAIDTMLYVKDP 527
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 44/298 (14%)
Query: 10 TCEAFGVPDVTYSWFRNGE----LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
TCEA G P+ + W +NG+ L+ + E+ + I +N Y Y+
Sbjct: 63 TCEAKGNPEPEFRWMKNGQEFDPFLDPRLMKEENSGTFVIPNNGNLTEY------QGTYR 116
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWK 124
C A N+L T S ++ P F K L+ EG T+ C+ P+ P + W
Sbjct: 117 CYASNKLGTAISKEIEFIVPHVPKFPKETLDP-VVVEEGQPFTLKCDPPKGIPPLQIYWM 175
Query: 125 KDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTAT--NVHGMDESKGRLIVLH-- 178
I R + NG+L S V +D Y C A + + + +++
Sbjct: 176 TISLQHIEQDERVSMGLNGDLYFSHAVEKDSRRDYCCFAAFPRIRTIVQKNAMSVIVQTK 235
Query: 179 --------GPSYYEQLPPKITIAAHR---------NLQLRCSAHTEELLDVAYIWTHNGV 221
+ ++ P +T ++ R +L+L C A V + V
Sbjct: 236 KSDTSPETANAILQRRPSLLTPSSERSETQLVKEEDLKLECIAEGFPTPQVEW------V 289
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++G+ + + N G LL + D+G+Y C K+ +G+ TV +E PP
Sbjct: 290 KVGHRLPIKAKLEN---HGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPP 344
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 139
Q R L PS ++ SET + ++ + C E P P+ W K G+ + + K+
Sbjct: 249 QRRPSLLTPSSER----SETQLVKEEDLKLECIAEGFPTPQVEWVKVGHRLPI--KAKLE 302
Query: 140 ENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 198
+G LLI P V ++DSG Y C A N G + + P + + ++++ ++
Sbjct: 303 NHGKLLIVPRVEQEDSGKYMCKAKNALGEAVHYFTVTIEEPPEWVSEPESQLSMIG-SDV 361
Query: 199 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
++CSA + W NGV L E N + G + + NA +D+ Y+C
Sbjct: 362 LIKCSASGTPQPTIT--WRVNGV-----PLQEAPAANRKVLGDTILLRNAKASDSAVYQC 414
>gi|297273516|ref|XP_001087501.2| PREDICTED: protein sidekick-2 [Macaca mulatta]
Length = 2037
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 211/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 220 CRAKGVPPPSITWYKDAAVVEVEKLARFRQR----SDGGLQISGLVPD-DTGMFQCFARN 274
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 275 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 332
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 333 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 391
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + V YIW +G +G ++ N P I +D G L I
Sbjct: 392 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLG-VESN----PRIRLDRNGSLHI 446
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 447 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 506
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W ++ VD + + LVP +Y+F++ A
Sbjct: 507 DGNSPLLRYVLEMSEN-NAPW-----TILLASVD---PKATSVTVKGLVPARSYQFRLCA 557
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 558 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 617
Query: 424 IFWRK---KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I W +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 618 IRWCMPVVPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 672
Query: 481 TIW 483
T W
Sbjct: 673 TEW 675
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 176/488 (36%), Gaps = 48/488 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 313 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 369
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V+ + K P + G ++ + + +++W+KDG +
Sbjct: 370 SRGVDEASADL-VVWARTRITKPPQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATL 428
Query: 131 G--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 429 GVESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVA 488
Query: 189 KITIAAHRNLQLRCSAHTE---ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + LL Y+ ++++E P ++D
Sbjct: 489 TLSTVERRAINLTWTKPFDGNSPLLR--YV----------LEMSENNAPWTILLASVDPK 536
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 537 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 596
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL--- 351
IQW P +H I + + W + +G + T +A + N+L
Sbjct: 597 IMIQW-----QPPPESHQNGILK-GYIIRWC-MPVVPVGYQFKNIT---DADVNNLLLED 646
Query: 352 -VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 647 LIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNAP 705
Query: 411 PREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 706 SPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCFT 765
Query: 470 DVGPGPES 477
G GP S
Sbjct: 766 TPGDGPRS 773
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 812 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 868
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 869 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 922
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 923 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 981
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + R+ E+ +
Sbjct: 982 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1033
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 1034 TEYRVQVQAFNAIGSGPWSQTV 1055
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1697 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1753
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1754 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1787
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 106/282 (37%), Gaps = 38/282 (13%)
Query: 105 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 16 GEAAVIHAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 75
Query: 163 NVHGMDESKGRLIVLH------GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELL 210
N D + I L GP+ I +A + L C A+ L+
Sbjct: 76 NDKNGDNKTSQPITLAVERDVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLI 135
Query: 211 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKI 267
+ IW +G+ L + I+ L I N + +DAG YEC + S+V +
Sbjct: 136 KLHIIWKKDGM---------LLSGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSV 186
Query: 268 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 327
+ V PP V+ E H T+ + D + + I TW+
Sbjct: 187 VRGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKD 235
Query: 328 SEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 368
+ V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 236 AAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAG 277
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1267 PPSRPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASS 1325
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1326 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1373
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1374 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1433
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1434 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1476
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G S+P + A P AP + G L ++WEP P + N
Sbjct: 1460 YEIRMSVYNAVGEGPSSTPQEVFVGEA-VPTAAPRNVVVHGATATQLDVTWEPPPLDSHN 1518
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1519 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1573
Query: 474 GPES 477
GP S
Sbjct: 1574 GPRS 1577
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 957 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1014
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1015 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1066
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1067 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 1125
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1126 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1154
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1166 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1224
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+G+ + D+P Q PSR +
Sbjct: 1225 YTATG-------LKPESVYLFRITAQTRKGWGDAAEALVVTTEKRDRP-QPPSRPVVQQE 1276
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1277 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASSFIVDRLKPF 1334
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1335 --TSYKFRVKATNDIG 1348
>gi|237858648|ref|NP_001153795.1| neurofascin isoform 7 precursor [Gallus gallus]
Length = 1179
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 217/486 (44%), Gaps = 50/486 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE----DQDRYFIQDNVLTIRYLNPE-RD 60
D C A G P + W NGE P+E + R D TI + + +
Sbjct: 365 DGRLVCRANGNPKPSIQWLVNGE-------PIEGSPPNPSREVAGD---TIVFRDTQIGS 414
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
A+YQC A N+ ++A + VL + P P + + C +P P
Sbjct: 415 SAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPT 473
Query: 121 FVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V
Sbjct: 474 LRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-K 531
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ + P + +L C + L + W + + IGN E
Sbjct: 532 DPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE------ 585
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
D GL I + D G+Y CV + + K S K + V P P +++ ++ + S
Sbjct: 586 --DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLERPDRPRDLELSDLAERSVK 642
Query: 297 IQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ W G N PIT Y + + TW N S RY G +++ + L P+
Sbjct: 643 LTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSALLS-LSPY 692
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+W PL +
Sbjct: 693 VNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQ 752
Query: 415 QNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
PN+ Y + WR+++ + +ET+K +V V P Y YE+KVQA ND G
Sbjct: 753 AYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAENDFGR 806
Query: 474 GPESEV 479
PE E
Sbjct: 807 APEPET 812
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 182/491 (37%), Gaps = 83/491 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L + LE+ ++ NV E D Y
Sbjct: 275 DLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNV-------SEEDSGEYF 327
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 328 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPSIQWLV 384
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I E I V RD S +Y C A+N HG + + VL
Sbjct: 385 NGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 438
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+ I A RN ++ + LD + W NG GNM L+
Sbjct: 439 ---DVPPR--ILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQ--GNM----LDG 487
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
N + G LE++ A D G Y CV + +GK+ + + V+ P + G + V +
Sbjct: 488 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKR 547
Query: 293 TSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
S P H ++ TW + + Y G + ++
Sbjct: 548 GSM------------PRLHCRVKHDPTLKLTVTW-------LKDDAPLYIGNRMKKEDDG 588
Query: 351 LVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
L + E + +A EL + Y T ++P P + + +
Sbjct: 589 LTIYGVAEKDQGDYTCVASTELD----KDSAKAYLTVLERP-DRPRDLELSDLAERSVKL 643
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEY 461
+W +P + N+P Y + + + FQ T + GNV A++ + Y Y
Sbjct: 644 TW--IPGDDNNSPITDYIVQFE---EDRFQPGTWHNHSRYPGNVNSALLSLSP---YVNY 695
Query: 462 EVKVQAINDVG 472
+ +V A+NDVG
Sbjct: 696 QFRVIAVNDVG 706
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 48 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 105 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 163
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P ++ ++ I R +NG+L S V D+ YSC A
Sbjct: 164 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 223
Query: 162 -------------TNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAH 205
T++ D R + PS+ + R +L L C A
Sbjct: 224 YTLKVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIAS 283
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
D+ +W G G + + + N N L I+N S D+GEY C+ + +G
Sbjct: 284 GVPAPDI--MWYKKG---GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMG 335
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 336 SIRHTISVRVKAAP 349
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 273 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 332
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 333 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 389
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 390 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 444
>gi|237858641|ref|NP_001153792.1| neurofascin isoform 4 precursor [Gallus gallus]
Length = 1170
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 217/486 (44%), Gaps = 50/486 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE----DQDRYFIQDNVLTIRYLNPE-RD 60
D C A G P + W NGE P+E + R D TI + + +
Sbjct: 365 DGRLVCRANGNPKPSIQWLVNGE-------PIEGSPPNPSREVAGD---TIVFRDTQIGS 414
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
A+YQC A N+ ++A + VL + P P + + C +P P
Sbjct: 415 SAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPT 473
Query: 121 FVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V
Sbjct: 474 LRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-K 531
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ + P + +L C + L + W + + IGN E
Sbjct: 532 DPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE------ 585
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
D GL I + D G+Y CV + + K S K + V P P +++ ++ + S
Sbjct: 586 --DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLERPDRPRDLELSDLAERSVK 642
Query: 297 IQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ W G N PIT Y + + TW N S RY G +++ + L P+
Sbjct: 643 LTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSALLS-LSPY 692
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+W PL +
Sbjct: 693 VNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQ 752
Query: 415 QNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
PN+ Y + WR+++ + +ET+K +V V P Y YE+KVQA ND G
Sbjct: 753 AYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAENDFGR 806
Query: 474 GPESEV 479
PE E
Sbjct: 807 APEPET 812
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 182/491 (37%), Gaps = 83/491 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L + LE+ ++ NV E D Y
Sbjct: 275 DLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNV-------SEEDSGEYF 327
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 328 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPSIQWLV 384
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I E I V RD S +Y C A+N HG + + VL
Sbjct: 385 NGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 438
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+I A RN ++ + LD + W NG GNM L+
Sbjct: 439 ---DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQ--GNM----LDG 487
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
N + G LE++ A D G Y CV + +GK+ + + V+ P + G + V +
Sbjct: 488 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKR 547
Query: 293 TSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
S P H ++ TW + + Y G + ++
Sbjct: 548 GSM------------PRLHCRVKHDPTLKLTVTW-------LKDDAPLYIGNRMKKEDDG 588
Query: 351 LVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
L + E + +A EL + Y T ++P P + + +
Sbjct: 589 LTIYGVAEKDQGDYTCVASTELD----KDSAKAYLTVLERP-DRPRDLELSDLAERSVKL 643
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEY 461
+W +P + N+P Y + + + FQ T + GNV A++ + Y Y
Sbjct: 644 TW--IPGDDNNSPITDYIVQFE---EDRFQPGTWHNHSRYPGNVNSALLSLSP---YVNY 695
Query: 462 EVKVQAINDVG 472
+ +V A+NDVG
Sbjct: 696 QFRVIAVNDVG 706
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 48 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 105 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 163
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P ++ ++ I R +NG+L S V D+ YSC A
Sbjct: 164 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 223
Query: 162 -------------TNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAH 205
T++ D R + PS+ + R +L L C A
Sbjct: 224 YTLKVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIAS 283
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
D+ +W G G + + + N N L I+N S D+GEY C+ + +G
Sbjct: 284 GVPAPDI--MWYKKG---GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMG 335
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 336 SIRHTISVRVKAAP 349
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 273 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 332
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 333 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 389
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 390 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 442
>gi|355568883|gb|EHH25164.1| hypothetical protein EGK_08937 [Macaca mulatta]
Length = 1851
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 211/484 (43%), Gaps = 38/484 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 9 CRAKGVPPPSITWYKDAAVVEVEKLARFRQR----SDGGLQISGLVPD-DTGMFQCFARN 63
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 64 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 121
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 122 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 180
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + V YIW +G +G ++ N P I +D G L I
Sbjct: 181 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLG-VESN----PRIRLDRNGSLHI 235
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 236 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 295
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W ++ VD + + LVP +Y+F++ A
Sbjct: 296 DGNSPLLRYVLEMSEN-NAPW-----TILLASVD---PKATSVTVKGLVPARSYQFRLCA 346
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 347 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 406
Query: 424 IFWRKKNDT----EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
I W +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 407 IRWYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSK 461
Query: 480 VTIW 483
VT W
Sbjct: 462 VTEW 465
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 178/488 (36%), Gaps = 47/488 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 102 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 158
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V+ + K P + G ++ + + +++W+KDG +
Sbjct: 159 SRGVDEASADL-VVWARTRITKPPQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATL 217
Query: 131 G--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 218 GVESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVA 277
Query: 189 KITIAAHRNLQLRCSAHTE---ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + LL Y+ ++++E P ++D
Sbjct: 278 TLSTVERRAINLTWTKPFDGNSPLLR--YV----------LEMSENNAPWTILLASVDPK 325
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 326 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 385
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL--- 351
IQW P +H I + + W+ ++ +G + T +A + N+L
Sbjct: 386 IMIQW-----QPPPESHQNGILK-GYIIRWYCLAGLPVGYQFKNIT---DADVNNLLLED 436
Query: 352 -VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 437 LIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNAP 495
Query: 411 PREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 496 SPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCFT 555
Query: 470 DVGPGPES 477
G GP S
Sbjct: 556 TPGDGPRS 563
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 39/282 (13%)
Query: 220 GVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273
G RI + N T PN+ ++ +T + E ++ G+ +
Sbjct: 606 GYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 662
Query: 274 IVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFN 326
I G PP LPG + + + S T+Q+ G I+ + + A+ W
Sbjct: 663 ISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLL 722
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
+ H + E D + + + L P++ Y F++ N +G PS PS + T P
Sbjct: 723 I--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPP 775
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGN 444
AP+ + L + W PLP + N ++ YKI K + ++ +TL
Sbjct: 776 DMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH--- 829
Query: 445 VGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ E+ +TEY V+VQA N +G GP S+ V
Sbjct: 830 --VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 869
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1511 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1567
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1568 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1601
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164
V I C + P P W KD + + R + +G L IS + DD+G++ C A N
Sbjct: 5 VDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNA 64
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 65 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 120
Query: 225 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 121 -LASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 171
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1081 PPSRPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASS 1139
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1140 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1187
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1188 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1247
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1248 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1290
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G S+P + A P AP + G L ++WEP P + N
Sbjct: 1274 YEIRMSVYNAVGEGPSSTPQEVFVGEA-VPTAAPRNVVVHGATATQLDVTWEPPPLDSHN 1332
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1333 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1387
Query: 474 GPES 477
GP S
Sbjct: 1388 GPRS 1391
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 771 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 828
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 829 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 880
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 881 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 939
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 940 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 968
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 980 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1038
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+G+ + D+P Q PSR +
Sbjct: 1039 YTATG-------LKPESVYLFRITAQTRKGWGDAAEALVVTTEKRDRP-QPPSRPVVQQE 1090
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1091 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASSFIVDRLKPF 1148
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1149 --TSYKFRVKATNDIG 1162
>gi|338711348|ref|XP_001916955.2| PREDICTED: protein sidekick-2 [Equus caballus]
Length = 2162
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 211/485 (43%), Gaps = 41/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ + E L Q D L I L P+ D M+QC A+N
Sbjct: 320 CRAKGVPPPSITWYKDAAAVEVERLSRFRQR----ADGGLQISALVPD-DTGMFQCFARN 374
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 375 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 432
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ LIV + +
Sbjct: 433 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLIVW-ARTRITKS 491
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + V Y+W +G +G M+ N P I +D G L I
Sbjct: 492 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGAALG-MESN----PRIRLDKNGSLHI 546
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + + + + W
Sbjct: 547 SQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTTERRAINLTWAKPF 606
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKV 361
P+ Y + N N+ W V+ VD EA+ V LVP +Y+F++
Sbjct: 607 DGNSPLIRYVLEMSEN-NAPW-----TVLLASVD-----PEATSVMVKGLVPARSYQFRL 655
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 656 CAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKG 715
Query: 422 YKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 716 YVIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSS 770
Query: 479 VVTIW 483
VT W
Sbjct: 771 KVTEW 775
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 138/387 (35%), Gaps = 56/387 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 34 LVLTCMAEGSWPLEFKWLHNSRELTKFSL----EYRYMITSLDRT--------HAGFYRC 81
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 82 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPRPQVTWF 138
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
++G I R I L+I D+G Y A N D + I L G
Sbjct: 139 REGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGG 198
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNEL 231
P+ I +A + L C A+ L+ + IW +G+ + G D N
Sbjct: 199 PADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIRLHIIWRKDGLLLSGGISDYNR- 257
Query: 232 ETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
L I N + +D+G YEC + S+V + + V PP V+
Sbjct: 258 ----------RLTIPNPTGSDSGYYECEAVLRSSSVPSVIRGAYLSVLEPPQF---VKEP 304
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E H T+ + D + + I TW+ + V + + R+ R + ++
Sbjct: 305 ERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAAVEVERLSRFRQRADGGLQ 356
Query: 349 -NVLVPWSTYEFKVIAGNELGYGEPSS 374
+ LVP T F+ A N G + S+
Sbjct: 357 ISALVPDDTGMFQCFARNAAGEAQTST 383
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y + R + W +VS +
Sbjct: 1392 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNAST 1450
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ I
Sbjct: 1451 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTII 1498
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P P +K N + ++I +R+ + TL+ N G +
Sbjct: 1499 SVTPHTTTSVLIRWQPPPEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1558
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1559 SMYSMRNLSRPSLTHYELDNLNKHRRYEIRMSVYNAVGEGPLS 1601
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + G L ++WEP P E QN
Sbjct: 1585 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1643
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1644 GDIQGYKIYFWEAQRQNVTERVKTLFLAESG------VKLKNLTGYTAYMVSVAAFNAAG 1697
Query: 473 PGPES 477
GP S
Sbjct: 1698 DGPRS 1702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 219 NGVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKIST 269
+G RI + N T PN+ ++ GL +T + E + G++S
Sbjct: 916 SGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSA 971
Query: 270 KTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NS 322
T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 972 ST--ISSGVPPELPGAPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGE 1029
Query: 323 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382
W + H + E D + + + L P++ Y F++ N +G PS PS + T
Sbjct: 1030 EWLLI--HQLTNEPDA----RSLEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTL 1082
Query: 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLK 440
P AP+ + L + W PLP + N ++ YKI K + + +TL
Sbjct: 1083 QAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLS 1139
Query: 441 EYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ E+ +TEY V+VQA N +G GP S V
Sbjct: 1140 H-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSHTV 1180
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ + W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1822 IIVRYSSAIAVHWSSGDPGRGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1878
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PS PS + PA K
Sbjct: 1879 ---ILKPGVSYDFRVIAVNDYGFGTPSGPS--QSVPAQK 1912
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 1291 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANAATVEVLAPSARQ 1349
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1350 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1401
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY + R+ + + N VV F
Sbjct: 1402 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNASTFVVDRLKPF 1459
Query: 457 YYTEYEVKVQAINDVGPGPESE 478
T Y+ +V+A ND+G SE
Sbjct: 1460 --TSYKFRVKATNDIGDSEFSE 1479
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 24/257 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D LE P++N T SF + V S + S K + P P V
Sbjct: 1042 DARSLEVPDLN------PFTYYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVT 1094
Query: 287 VVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++W + NG P + YKI +R + + + HV+ V+R
Sbjct: 1095 LRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS---HVVQDRVER--- 1148
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S + T P P+ +
Sbjct: 1149 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHTVMGRTRESVPSSGPTNVSALATTSS 1204
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+ + W +P +N + YK+ +++K D++ Q GN + ++ Y Y
Sbjct: 1205 SMLVRWNEIPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS-AQLTGLGKYVLY 1262
Query: 462 EVKVQAINDVGPGPESE 478
EV+V A +G G S
Sbjct: 1263 EVQVLAFTRIGDGSPSH 1279
>gi|395533097|ref|XP_003768600.1| PREDICTED: protein sidekick-2 [Sarcophilus harrisii]
Length = 2153
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 207/484 (42%), Gaps = 39/484 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C+A GVP +W+++ +++ + L R+ + D L I L P+ D M+QC A+
Sbjct: 312 CQAKGVPSPITTWYKDAAVIDVKKL-----SRFRLHGDGSLQISGLVPD-DTGMFQCFAR 365
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N +S L V ++ P+ + PL+S +G +V + C AP+P W+K I
Sbjct: 366 NSAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERI 423
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LLISP D+G Y+C ATN G+DE+ LIV +
Sbjct: 424 LASGSIQLPRFTLLESGSLLISPTRISDAGSYTCLATNSRGVDEASADLIVW-ARTRITM 482
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + + YIW +G I + P + +D G L
Sbjct: 483 APQDQSVIKGTKAFMTCGVTHDPSVSIRYIWEKDGAVISVDSI-----PRMRLDKNGSLH 537
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + S + W
Sbjct: 538 ISQTWSGDIGTYTCRVLSAGGNDSKSAYLRVRQLPHAPEHPMATLSTAERRSINLTWAKP 597
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ HY + N N+ W V+ VD EA+ V LVP +Y+F+
Sbjct: 598 FDGNSPLIHYVLEMSEN-NAPW-----TVLLPSVD-----PEATSVMVKGLVPARSYQFR 646
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 647 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 706
Query: 421 YYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y I F +Q + N + + + +T YE+ V A N G G S
Sbjct: 707 GYIIRFCLAGLPVGYQ---FRNITNADVNNLLLEELIIWTNYEISVAAYNSAGLGVYSSK 763
Query: 480 VTIW 483
VT W
Sbjct: 764 VTEW 767
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 929 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 985
Query: 290 VHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + +A W + H + E D +
Sbjct: 986 IGPRSVTLQFRPGYDGKTSISRWLVEAQVAVVGEGEEWLLI--HQLTNEPDA----RSME 1039
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ N L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1040 VPN-LNPYTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1098
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K ++ +TL + RI E+ +
Sbjct: 1099 WMPLPEMEYNGNPESVGYKI---KYTRSDGHGKTLSH-----VVHDRIEREYTIEDLEEW 1150
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S++V
Sbjct: 1151 TEYRVQVQAFNAIGTGPWSQIV 1172
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G SSP + A P P + G L ++WEP P E QN
Sbjct: 1577 YEIRMSVYNAVGEGPSSSPQEVFVGEA-VPTAPPQNVAVHGATATQLDVTWEPPPLEAQN 1635
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1636 GDIQGYKIYFWEAQRRNSTERLKTLFLPENG------VKLKNLTGYTAYLVSVAAFNAAG 1689
Query: 473 PGPES 477
GP S
Sbjct: 1690 DGPRS 1694
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 134/381 (35%), Gaps = 56/381 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 26 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 73
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+N++ + SF++ GE V + P+P+ W +D
Sbjct: 74 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA-VIKAPRISSFPQPQVTWFRD 132
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPS 181
G I R I + L+I D+G Y A N D + I L GP+
Sbjct: 133 GRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPA 192
Query: 182 YYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
I +A + + C A+ L+ + IW +GV +
Sbjct: 193 DPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPVSG---------G 243
Query: 236 INIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
I+ L I N ++ G YEC + S+V + + V PP ++ E H
Sbjct: 244 ISDHNRRLTILNPKGSNTGYYECEAVLRSSSVPSVVRGAVLSVLEPPQF---IKEPERHI 300
Query: 293 TSATIQWTDGATNGR----PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
T+ + D + PIT TW+ + + K++ R+ + S++
Sbjct: 301 TAEMEKVVDIPCQAKGVPSPIT------------TWYKDAAVIDVKKLSRFRLHGDGSLQ 348
Query: 349 -NVLVPWSTYEFKVIAGNELG 368
+ LVP T F+ A N G
Sbjct: 349 ISGLVPDDTGMFQCFARNSAG 369
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1814 IIIRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1870
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L +Y+F+VIA N+ GYG PSSPS + PA K
Sbjct: 1871 ---ILKHGVSYDFRVIAVNDYGYGTPSSPS--QSVPAQK 1904
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W + I Y+I R N +T S V+ +
Sbjct: 1283 PGPPMGILFPEVRPTSVRLIWQPPSAPNGIILAYQITHRLN-TTTANTASVEVLTPSARQ 1341
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F+++A G+GE + D+P Q PS+ I
Sbjct: 1342 YTATG-------LKPESIYLFRIMAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVINQE 1393
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + ++ + N VV F
Sbjct: 1394 NVKARSVLLSWE--PGSDGLSPVRYYTIQSRELPNGKWALHSSSVTHNATSFVVDRLKPF 1451
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V++ ND+G
Sbjct: 1452 --TSYKFRVKSTNDIG 1465
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 27/207 (13%)
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
V S + W G+ P+ +Y I +R N W S V T + + +
Sbjct: 1395 VKARSVLLSWEPGSDGLSPVRYYTIQSRELPNGKWALHSSSV--------THNATSFVVD 1446
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+++Y+F+V + N++G E S S T P +AP+ + + ISW+P
Sbjct: 1447 RLKPFTSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTILSVTPHTTTSVLISWQP 1506
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------------ 457
+K N + ++I +R+ + T++ N + S +
Sbjct: 1507 PAEDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLTQY 1566
Query: 458 -------YTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1567 ELDNLSKHKRYEIRMSVYNAVGEGPSS 1593
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 24/256 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D +E PN+N T SF + V S + S K + P P V
Sbjct: 1034 DARSMEVPNLN------PYTFYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVT 1086
Query: 287 VVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++W + NG P + YKI R++ + + HV+ ++R
Sbjct: 1087 LRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYTRSDGHGKTLS---HVVHDRIER--- 1140
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S T P P+ +
Sbjct: 1141 --EYTIED-LEEWTEYRVQVQAFNAIGTG-PWSQIVVGRTRESVPSSGPTNVSALATTSS 1196
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+ + W +P +N + YK+ +++K D++ Q + GN ++ ++ Y Y
Sbjct: 1197 SMLVRWNEIPEADRNGLVLGYKVVYKEK-DSDTQPQFWLVEGNSSLS-AQLTGLGRYVLY 1254
Query: 462 EVKVQAINDVGPGPES 477
E++V A +G G S
Sbjct: 1255 EIQVLAFTRIGDGTPS 1270
>gi|119609532|gb|EAW89126.1| sidekick homolog 2 (chicken), isoform CRA_a [Homo sapiens]
Length = 2086
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 210/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 199 CQAKGVPPPSITWYKDAAVVEVEKLTRFRQR----NDGGLQISGLVPD-DTGMFQCFARN 253
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 254 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 311
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 312 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 370
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 371 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 425
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 426 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 485
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 486 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 536
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 537 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 596
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 597 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 651
Query: 481 TIW 483
T W
Sbjct: 652 TEW 654
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 292 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 348
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 349 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 405
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 406 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 465
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 466 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 515
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 516 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 575
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 576 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 624
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 625 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 683
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 684 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 743
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 744 TTPGDGPRS 752
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 112/280 (40%), Gaps = 27/280 (9%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDP 61
+++T C A P + W ++G LL+ + D +R LTI NP D
Sbjct: 100 SEVTLECVANARPLIKLHIIWKKDGVLLSGG---ISDHNRR------LTIP--NPTGSDA 148
Query: 62 AMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A + + + A L VL P F K P E A V I C + P
Sbjct: 149 GYYECEAVLRSSSVPSVVRGAYLSVLE-PPQFVKEP-ERHITAEMEKVVDIPCQAKGVPP 206
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KD + + R + +G L IS + DD+G++ C A N G ++ L V
Sbjct: 207 PSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P T+ ++ L C T A W G RI + ++ P
Sbjct: 267 TSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRF 321
Query: 237 N-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 322 TPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 361
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 816 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 872
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 873 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 926
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 927 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 985
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 986 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1037
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 1038 TEYRVQVQAFNAIGSGPWSQTV 1059
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1701 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1757
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1758 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1791
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1464 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1522
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1523 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1577
Query: 474 GPES 477
GP S
Sbjct: 1578 GPRS 1581
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1271 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1329
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1330 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1377
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1378 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1437
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1438 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1480
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1170 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1228
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1229 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1280
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1281 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1338
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1339 --TSYKFRVKATNDIG 1352
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 961 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1018
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1019 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1070
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1071 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1129
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1130 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1158
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 132 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPSYYEQL 186
+G R+ I L+I D+G Y A N D + I L GP+
Sbjct: 25 AGCRQAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAP 84
Query: 187 PPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
I +A + L C A+ L+ + IW +GV L + I+
Sbjct: 85 TIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLSGGISDHN 135
Query: 241 GLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I N + +DAG YEC + S+V + + V PP V+ E H T+
Sbjct: 136 RRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPERHITAEME 192
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWST 356
+ D + + I TW+ + V +++ R+ R + ++ + LVP T
Sbjct: 193 KVVDIPCQAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDT 244
Query: 357 YEFKVIAGNELG 368
F+ A N G
Sbjct: 245 GMFQCFARNAAG 256
>gi|119609534|gb|EAW89128.1| sidekick homolog 2 (chicken), isoform CRA_c [Homo sapiens]
Length = 2041
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 210/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 199 CQAKGVPPPSITWYKDAAVVEVEKLTRFRQR----NDGGLQISGLVPD-DTGMFQCFARN 253
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 254 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 311
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 312 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 370
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 371 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 425
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 426 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 485
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 486 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 536
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 537 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 596
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 597 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 651
Query: 481 TIW 483
T W
Sbjct: 652 TEW 654
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 292 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 348
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 349 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 405
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 406 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 465
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 466 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 515
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 516 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 575
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 576 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 624
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 625 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 683
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 684 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 743
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 744 TTPGDGPRS 752
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 112/280 (40%), Gaps = 27/280 (9%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDP 61
+++T C A P + W ++G LL+ + D +R LTI NP D
Sbjct: 100 SEVTLECVANARPLIKLHIIWKKDGVLLSGG---ISDHNRR------LTIP--NPTGSDA 148
Query: 62 AMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A + + + A L VL P F K P E A V I C + P
Sbjct: 149 GYYECEAVLRSSSVPSVVRGAYLSVLE-PPQFVKEP-ERHITAEMEKVVDIPCQAKGVPP 206
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KD + + R + +G L IS + DD+G++ C A N G ++ L V
Sbjct: 207 PSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P T+ ++ L C T A W G RI + ++ P
Sbjct: 267 TSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRF 321
Query: 237 N-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 322 TPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 361
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 816 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 872
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 873 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 926
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 927 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 985
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 986 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1037
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 1038 TEYRVQVQAFNAIGSGPWSQTV 1059
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1701 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1757
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1758 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1791
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1464 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1522
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1523 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1577
Query: 474 GPES 477
GP S
Sbjct: 1578 GPRS 1581
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1271 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1329
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1330 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1377
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1378 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1437
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1438 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1480
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1170 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1228
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1229 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1280
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1281 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1338
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1339 --TSYKFRVKATNDIG 1352
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 961 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1018
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1019 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1070
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1071 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1129
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1130 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1158
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 132 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPSYYEQL 186
+G R+ I L+I D+G Y A N D + I L GP+
Sbjct: 25 AGCRQAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAP 84
Query: 187 PPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
I +A + L C A+ L+ + IW +GV L + I+
Sbjct: 85 TIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLSGGISDHN 135
Query: 241 GLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I N + +DAG YEC + S+V + + V PP V+ E H T+
Sbjct: 136 RRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPERHITAEME 192
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWST 356
+ D + + I TW+ + V +++ R+ R + ++ + LVP T
Sbjct: 193 KVVDIPCQAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDT 244
Query: 357 YEFKVIAGNELG 368
F+ A N G
Sbjct: 245 GMFQCFARNAAG 256
>gi|432862638|ref|XP_004069954.1| PREDICTED: neuronal cell adhesion molecule-like [Oryzias latipes]
Length = 1176
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 213/478 (44%), Gaps = 39/478 (8%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLE---DQDRYFIQDNVLTIRYLNPERDPAMYQC 66
TC A G P W +N +P+E + D ++D+++ R + + A+YQC
Sbjct: 366 TCRASGKPKPLIRWTKN-------VMPIETGLEDDTMKVEDDMIIFRDVK-TSNSAVYQC 417
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL+ P P+ + + C+ +P P W KD
Sbjct: 418 NVSNEFGYLLANAFVNVLSEPPRVLT-PVNKKYEVIRNHRAMLDCSFFGSPIPNITWFKD 476
Query: 127 G-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ G + +NG L I DSG Y+C A N+ G+ E+ L V P+++ +
Sbjct: 477 SRSSTLDGDSYALHDNGTLEIRISRPRDSGKYTCVARNILGIFENHVFLEVKE-PTHFLK 535
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P I R++ C + L W + + + D + L I
Sbjct: 536 QPEYQVIKRGRSVTFECKVKHDSSLTATMTWLKDDEELPDDD-------RFVVGAESLTI 588
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
TN +DAG Y C++ +T+ +S + V P P +++ + K S + W G
Sbjct: 589 TNVVDSDAGMYTCIMNTTLDHVSASAELTVVERPDPPTDLELTDQTKRSVVLTWIPGNEY 648
Query: 306 GRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
I ++ I + + W N++ HV G + + L P Y F+V+A
Sbjct: 649 NSHIKNFLIQYEDSLHHRGHWHNLT-HVPGTKTSAHLK---------LSPHVHYTFRVLA 698
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G+ +PS+PS Y T P + P+ + G G + +L ISW+PL + + N P ++YK
Sbjct: 699 LNDVGWSQPSNPSQMYKTDPAAPDENPTGVQGLGTEPNNLIISWKPLTKLQSNGPGLHYK 758
Query: 424 IFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ +R KK +E+ + + N VV S F YE+KVQA+N+ G GPE VV
Sbjct: 759 VMYREKKPGSEWITTNV---ANNSRFVVSGTSTF--APYELKVQAVNNYGEGPEPAVV 811
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 20/270 (7%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G + + C E P P+ W KDG+++ +G + N L I VS + G+Y CTATN
Sbjct: 269 GHKLDMECIAEGRPTPEISWTKDGSVLPAGRTSFLQFNKTLQIDDVSDSEEGVYRCTATN 328
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P + P + ++ N L C A + + WT N + I
Sbjct: 329 KFGSVHHTFHVTVKAAPYWISGPPSNLVLSPGENGMLTCRASGKPKPLIR--WTKNVMPI 386
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 282
LE + ++ ++ + +++ Y+C V + G + V ++ PP +
Sbjct: 387 E----TGLEDDTMKVEDDMIIFRDVKTSNSAVYQCNVSNEFGYLLANAFVNVLSEPPRV- 441
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+ V+K I+ N R + N TWF S + D Y
Sbjct: 442 ----LTPVNKKYEVIR------NHRAMLDCSFFGSPIPNITWFKDSRSST-LDGDSYALH 490
Query: 343 KEASIE-NVLVPWSTYEFKVIAGNELGYGE 371
++E + P + ++ +A N LG E
Sbjct: 491 DNGTLEIRISRPRDSGKYTCVARNILGIFE 520
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 118/323 (36%), Gaps = 64/323 (19%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLT----IRYLN 56
+D + ++ CEA G PD ++SW R+G +E+ ++ N T I
Sbjct: 43 IDPRENIEIKCEAKGNPDPSFSWTRDGAHFK-----IEEHPNVNMRPNSGTLEVDITKRR 97
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
E +YQC A+N+ S + + P + K L+ EG ++ + C P A
Sbjct: 98 AESFEGVYQCTAENKHGKAVSDNIVVRQSRSPLWSKERLKPRV-VQEGVSLVLPCEPPAG 156
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------ 161
P ++ D N + R NG+L S V R+DS Y C A
Sbjct: 157 LPPPLIFWMDNNFQKLPQSTRVSQSLNGDLYFSNVRREDSRNDYICYARFPGTQTIQQKQ 216
Query: 162 ---TNVHGMDESKGRLIVLHG--------------PSYY---EQLPPKITIAAHRNLQLR 201
V +D + + PS+ ++ K+ + H+ L +
Sbjct: 217 PITVKVLNLDSINDTMAAFYNDTDLFSEAPADERMPSFLIPKDRHSSKVVLRGHK-LDME 275
Query: 202 CSAHTEELLDVAYIWTHNGV-----RIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
C A +++ WT +G R + N+ L+I + S ++ G Y
Sbjct: 276 CIAEGRPTPEIS--WTKDGSVLPAGRTSFLQFNK-----------TLQIDDVSDSEEGVY 322
Query: 257 ECVVKSTVGKISTKTTVIVEGPP 279
C + G + V V+ P
Sbjct: 323 RCTATNKFGSVHHTFHVTVKAAP 345
>gi|45383103|ref|NP_989869.1| protein sidekick-2 [Gallus gallus]
gi|23194256|gb|AAN15076.1| sidekick-2 [Gallus gallus]
Length = 2217
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 205/482 (42%), Gaps = 35/482 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+A GVP +W+++ L++ E L R+ + D L I L P+ D M+QC A+
Sbjct: 375 CQAKGVPPPDMAWYKDASLIHPEQL-----SRFQLLADGSLQISGLLPD-DTGMFQCFAR 428
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L V ++ P+ + P +S +G +V + C AP+P W+K I
Sbjct: 429 NAAGEVQTTTYLAVTSIAPNITRGPQDSTVI--DGMSVILNCETSGAPRPAITWQKGERI 486
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LL+SP D+G Y+C ATN G+DE+ L+V +
Sbjct: 487 LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVVW-ARTRITD 545
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + +DV YIW +G +G P + +D G L
Sbjct: 546 PPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEKDGAPLGTES-----GPRLRLDETGTLH 600
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P V + K + + W
Sbjct: 601 ISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQLPHAPESPVAVLSPLEKRAINLTWAKP 660
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
P+ Y + N N+ W V + E+ R LVP +Y+F++
Sbjct: 661 FDGNSPLLRYLVEISEN-NAPW-TVLLASVDPELTWVVVRG-------LVPARSYQFRLC 711
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G + S + + + P + P+ P + G + I W+P P QN Y
Sbjct: 712 AVNDVGRSQFSKDTERVSLPEEPPFAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLKGY 771
Query: 423 KI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
I + +Q K N + + + +T YE++V A N G G S VT
Sbjct: 772 IIRYCLAGLPVGYQ---FKNITNADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSMKVT 828
Query: 482 IW 483
W
Sbjct: 829 EW 830
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 14/238 (5%)
Query: 45 IQDNVLTIRYLNPER-DPAMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 100
I D + LNP D Y+C A + + A L VL P F K P E
Sbjct: 307 ISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLE-PPQFVKEP-ERHIT 364
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYS 158
A V I C + P P W KD ++I R ++ +G+L IS + DD+G++
Sbjct: 365 AEMEKVVAIPCQAKGVPPPDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQ 424
Query: 159 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
C A N G ++ L V + P T+ ++ L C T A W
Sbjct: 425 CFARNAAGEVQTTTYLAVTSIAPNITRGPQDSTVIDGMSVILNC--ETSGAPRPAITW-Q 481
Query: 219 NGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G RI + ++ P ++ G L ++ A DAG Y C+ ++ G ++V
Sbjct: 482 KGERI--LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVV 537
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 105/289 (36%), Gaps = 40/289 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 89 LVLTCMAEGSWPLEFKWLHNSRELTKFSL----EYRYMITSLDRT--------HAGFYRC 136
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF+ + GE + P A P+P+ W
Sbjct: 137 IVRNRMGALLQRQTEVQVAYMGSFEDSETQQSVSHGEAA---VIRAPRIASFPQPQVTWF 193
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 194 RDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVANVGG 253
Query: 180 PSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ +PP+ T +A + + C A+ L+ + IW +GV I +
Sbjct: 254 PADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPISS-------- 305
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 279
I+ L I N + D+G YEC + S+V ++ + V PP
Sbjct: 306 -GISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLEPP 353
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + ++ TI WT G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1878 ISRYGSAITIHWTSGDPGQGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMDILK 1936
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ V +Y+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1937 QGV-----SYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1971
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PS P + A P AP + L ++WEP P E QN
Sbjct: 1640 YEIRMSVYNAVGEGPPSPPQEVFVGEA-MPTGAPQNVAVKAATATQLDVTWEPPPTESQN 1698
Query: 417 APNIYYKI-FW---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW R+ ++ L E G V++ + YT Y V + A N G
Sbjct: 1699 GDIQGYKIHFWEAQRQNESARVKTLFLPETG------VKLKNLTGYTSYWVSIAAFNAAG 1752
Query: 473 PGPESEVVT 481
GP S VT
Sbjct: 1753 DGPRSTPVT 1761
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 43/285 (15%)
Query: 219 NGVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272
G RI + N T PN+ ++ +T + E ++ G+ ++
Sbjct: 971 TGYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSSS 1027
Query: 273 VIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN---STWF 325
I G PP LPG + + + S T+Q+ G I+ +++ A+ N W
Sbjct: 1028 TISSGVPPELPGAPTNLGISNIGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWG 1087
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
V H + E D + + N L P++ Y F++ N +G PS PS + T
Sbjct: 1088 LV--HQLANEPDA----RSLEVPN-LNPYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAP 1140
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYG 443
P AP+ + L + W PL ++ N ++ Y+I + + + G
Sbjct: 1141 PDVAPANVTLRTASETSLWLRWMPLLEQEYNGNPDSVGYRIRYLRSDGQ----------G 1190
Query: 444 NVGIAVV--RIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ V+ R+ E+ +TEY V+VQA N +G GP S +V
Sbjct: 1191 RAVVHVIHDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSHLV 1235
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W I Y++ R N + VSE V+G +
Sbjct: 1346 PGPPVGMLFPEVRTTSVRLIWQPPTAPNGIILAYQLTHRLNTTTANAAVSE-VLGPSTRQ 1404
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P +TY F + A G+GE + D+P Q PS+ +
Sbjct: 1405 YTATG-------LQPEATYLFSITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPLVRQE 1456
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWEP +P +Y + R+ E+ N VV F
Sbjct: 1457 DVRARSVLLSWEP--GSDGLSPVRFYTVQTRELPSGEWALHPASISHNATAFVVDRLKPF 1514
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1515 --TSYKFRVKATNDIG 1528
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P V+ +V S + W G+ P+ Y + R + W ++S +
Sbjct: 1447 PPSKPL-VRQEDVRARSVLLSWEPGSDGLSPVRFYTVQTRELPSGEWALHPASISHNATA 1505
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1506 FVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESESLTTLQAAPEEAPTIL 1553
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG------- 446
+ I W+P +K N + +++ +R+ + TL GN G
Sbjct: 1554 SVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYRELLYDSLRGFTLHGIGNPGATWAELT 1613
Query: 447 -IAVVRIPSEFYYTE-----------YEVKVQAINDVGPGPES 477
+ V SE T+ YE+++ N VG GP S
Sbjct: 1614 PVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVYNAVGEGPPS 1656
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGV 285
D LE PN+N T SF +V ++ + ++ ++ PP + P V
Sbjct: 1097 DARSLEVPNLN------PYTYYSFR--MRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANV 1148
Query: 286 QVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++W + NG P + Y+I R + HVI V+R
Sbjct: 1149 TLRTASETSLWLRWMPLLEQEYNGNPDSVGYRI--RYLRSDGQGRAVVHVIHDRVER--- 1203
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S T P PS +
Sbjct: 1204 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHLVLGRTRESVPSSGPSNVSAQATSSS 1259
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++ + W +P N + YK+ +++K D+E +++ GN + ++ + Y
Sbjct: 1260 NMLVRWSDIPEADCNGLILGYKVMFKEK-DSEARAQFWLAEGNTSRS-AQLTGLGKFMLY 1317
Query: 462 EVKVQAINDVGPG 474
E++V A +G G
Sbjct: 1318 EIRVLAFTRIGDG 1330
>gi|222352127|ref|NP_001138424.1| protein sidekick-2 precursor [Homo sapiens]
gi|296452966|sp|Q58EX2.3|SDK2_HUMAN RecName: Full=Protein sidekick-2; Flags: Precursor
Length = 2172
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 210/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 330 CQAKGVPPPSITWYKDAAVVEVEKLTRFRQR----NDGGLQISGLVPD-DTGMFQCFARN 384
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 385 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 442
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 443 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 556
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 557 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 616
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 617 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 667
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 668 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 727
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 728 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 782
Query: 481 TIW 483
T W
Sbjct: 783 TEW 785
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 423 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 479
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 480 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 536
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 537 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 596
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 597 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 646
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 647 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 706
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 707 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 755
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 756 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 815 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 874
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 875 TTPGDGPRS 883
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 136/379 (35%), Gaps = 52/379 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 92 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPQPQVTWF 148
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 149 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGG 208
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ I +A + L C A+ L+ + IW +GV L +
Sbjct: 209 PADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLS 259
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 260 GGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPER 316
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V +++ R+ R + ++ +
Sbjct: 317 HITAEMEKVVDIPCQAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRNDGGLQIS 368
Query: 350 VLVPWSTYEFKVIAGNELG 368
LVP T F+ A N G
Sbjct: 369 GLVPDDTGMFQCFARNAAG 387
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1168
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQTV 1190
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 474 GPES 477
GP S
Sbjct: 1709 GPRS 1712
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289
>gi|326668800|ref|XP_002662564.2| PREDICTED: cell adhesion molecule with homology to L1CAM (close
homolog of L1) b, partial [Danio rerio]
Length = 769
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 201/446 (45%), Gaps = 30/446 (6%)
Query: 44 FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE 103
++D ++I N E + A+YQC A N+ T ++A + ++ ++P + A E
Sbjct: 2 ILKDGTISIHNANTE-NSAVYQCEATNKHGTILANANIMIMNIQPLILTEN-NLQYMAVE 59
Query: 104 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +V + C ++P W K D G R + +NG+L I V ++D G YSC A
Sbjct: 60 GKSVVMHCKVFSSPASSITWSKADSANAVEGERFTVHQNGSLEIHNVMKEDMGEYSCFAQ 119
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 220
N G L V P+ P + + A +Q C + D +W +G
Sbjct: 120 NTEGKVAIAATLEV-KDPTRIVDPPRDLRVLAGTTIQFSCQPEFDPSFGDDFEVLWEKDG 178
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 280
+ LN E ++ G+LEI N SF D G Y CV ++ V + + V P
Sbjct: 179 IA-----LNGSEDGRYILEDGVLEIINVSFGDQGFYACVARTPVDQDVAVAQLSVVDVPD 233
Query: 281 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG--KEVDR 338
P V + E + S +QWT G + IT + + F S+H G +E+ R
Sbjct: 234 PPEDVILSEHNGRSVKLQWTPGDDHNSSITEFVL---------EFEESQHEPGSWREMMR 284
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
G ++ L Y F+V A NE+G G PS + +Y TPA P + P I
Sbjct: 285 VPGNHHSAPLK-LYGHVDYRFRVSAINEVGKGRPSQSTERYKTPASAPDKNPENIKIEAH 343
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ I+WEPL + N P + YK+ +R+ +D ++ +K + V P+
Sbjct: 344 LPHEMDINWEPLSPIEHNGPGLEYKVSYRRHGSDEDWTERMVKRH---SFLVKNTPT--- 397
Query: 458 YTEYEVKVQAINDVGPGPESEVVTIW 483
+ YE+K+QA N G GP+ +++T +
Sbjct: 398 FVLYEIKIQAKNHAGWGPDPKIITAY 423
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 137 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYYEQLPPKITIAAH 195
KI ++G + I + ++S +Y C ATN HG + +++++ P + +
Sbjct: 1 KILKDGTISIHNANTENSAVYQCEATNKHGTILANANIMIMNIQPLILTENNLQYMAVEG 60
Query: 196 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAG 254
+++ + C + + + + N +E + G LEI N D G
Sbjct: 61 KSVVMHCKVFSSPASSITWSKADSA--------NAVEGERFTVHQNGSLEIHNVMKEDMG 112
Query: 255 EYECVVKSTVGKISTKTTVIVEGP 278
EY C ++T GK++ T+ V+ P
Sbjct: 113 EYSCFAQNTEGKVAIAATLEVKDP 136
>gi|380805053|gb|AFE74402.1| protein sidekick-2 precursor, partial [Macaca mulatta]
Length = 905
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 211/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 328 CRAKGVPPPSITWYKDAAVVEVEKLARFRQR----SDGGLQISGLVPD-DTGMFQCFARN 382
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 383 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 440
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 441 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 499
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + V YIW +G +G ++ N P I +D G L I
Sbjct: 500 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLG-VESN----PRIRLDRNGSLHI 554
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 555 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 614
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W ++ VD + + LVP +Y+F++ A
Sbjct: 615 DGNSPLLRYVLEMSEN-NAPW-----TILLASVD---PKATSVTVKGLVPARSYQFRLCA 665
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 666 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 725
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 726 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 780
Query: 481 TIW 483
T W
Sbjct: 781 TEW 783
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 175/491 (35%), Gaps = 54/491 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 421 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 477
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V+ + K P + G ++ + + +++W+KDG +
Sbjct: 478 SRGVDEASADL-VVWARTRITKPPQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATL 536
Query: 131 G--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 537 GVESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVA 596
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWT-----HNGVRIGNMDLNELETP----NINID 239
++ R + L WT ++ + ++++E P ++D
Sbjct: 597 TLSTVERRAINL--------------TWTKPFDGNSPLLRYVLEMSENNAPWTILLASVD 642
Query: 240 GGLLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
+T A Y+ C V K K + + ++ E P P V
Sbjct: 643 PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTN 702
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL 351
S IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 703 QSIMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLL 751
Query: 352 ----VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 752 LEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTW 810
Query: 408 EPLPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 811 NAPSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 870
Query: 467 AINDVGPGPES 477
G GP S
Sbjct: 871 CFTTPGDGPRS 881
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 139/385 (36%), Gaps = 52/385 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 42 LVLTCMAEGSWPLEFKWLHNSRELTKFSL----EYRYMITSLDRT--------HAGFYRC 89
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 90 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIHAPRIASFPRPQVTWF 146
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 147 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGG 206
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ I +A + L C A+ L+ + IW +G+ L +
Sbjct: 207 PADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGM---------LLS 257
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 258 GGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPER 314
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V +++ R+ R + ++ +
Sbjct: 315 HITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAVVEVEKLARFRQRSDGGLQIS 366
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSS 374
LVP T F+ A N G + S+
Sbjct: 367 GLVPDDTGMFQCFARNAAGEVQTST 391
>gi|2275260|gb|AAC47654.1| tractin [Hirudo medicinalis]
Length = 1880
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 211/469 (44%), Gaps = 26/469 (5%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
+ C G+P T W N L E LP + R + VLT ++ +D + QC A
Sbjct: 354 FKCGVEGIPRPTVEWMLNKRPL--EDLPPNPRMRMNDERTVLTFSNVS-SKDIQVIQCNA 410
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N ++A L V PSF+ P+ S EG N + C+ APKP ++
Sbjct: 411 SNVHGYILANAYLNVFAEPPSFQDLPV-SPMKLTEGKNTVVQCSVFGAPKPLVTCLRNDT 469
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+I SG R K+ +GNLL+S + DSG Y C A+N G D LIV + + P
Sbjct: 470 VI-SGDRFKVDTHGNLLVSNLQLSDSGNYICFASNKFGNDSVGANLIVRRR-TEISRPPS 527
Query: 189 KITIAAHRNLQLRCSAHT--EELLDVAYIWTHNGVRIGNMDLNELETPNI-NIDGGLLEI 245
+ L C+A T EE ++ W +G I E +P + + L I
Sbjct: 528 DHVTTVGSEVVLHCNATTDPEEKNSLSVKWLKDGEPI----TFEGSSPGVFDFRDNSLTI 583
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
++G Y C+ + + + ++V+G P P V+++ +K+ A I+WT G N
Sbjct: 584 KKVEVKESGTYVCIASTDLDSDNITVELVVKGVPDPPENVEILRCNKSMAVIEWTPGFDN 643
Query: 306 GRPITHYKIIARTNWNSTW-FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PIT + + T+ + ++ +EH++ + + AS L PW+ Y F V A
Sbjct: 644 HDPITGHYVYCNTSRDEPGVYHRNEHLVP------SSKSSASFH--LRPWNNYTFHVKAI 695
Query: 365 NELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N +G PS + + +TPA P P ++ + G L I+WEP+ N P +Y
Sbjct: 696 NNIGMSGPSKFTTDFCSTPAHYPTMNPEKVCTESREPGQLVITWEPMGSNDLNGPGFHYL 755
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ +R + E E ++ + + I + + E+E+ VQA N VG
Sbjct: 756 VGFRLVDQDE---ELVRAVHDWQTKELVIEGQDVFKEFEIYVQAANQVG 801
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 107/291 (36%), Gaps = 45/291 (15%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETL--PLEDQDRYFIQDNVLTIRYLNPERD 60
N ++ CEA G P + + WF++GE L P +D+D+ I Y N +D
Sbjct: 47 NMEEVEIPCEATGTPPLVFQWFKDGEPLEKSEAERPFKDEDQGTI------TLYNNELKD 100
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
YQC KN+ T S L + ++ SF G N+T+ CN P++ P P
Sbjct: 101 EGYYQCIVKNKYGTAASVKTLLKMAVQESFPTVKEPQIVNVRVGDNLTLRCNPPKSYPTP 160
Query: 120 KFVWKKDGNIIGSGGRRKIFEN---------GNLLISPVSRDD---SGIYSCTATNVHGM 167
W + G + EN GN + V +D Y C + N
Sbjct: 161 DVYW----GTVKKGAKLLPLENTMRYNLDYEGNFHFANVMEEDHREGAYYLCISHNNAMR 216
Query: 168 DESKGRLIVL------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
+G ++ H P P K ++ +L+C +V+
Sbjct: 217 SSVQGNDCIIRINGSSKDGVRKHAPGVMWTSPRKDLALTGQSKKLKCIFSGYPTPNVS-- 274
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
W+ G + E P+ LEI N DAG Y C ST GK
Sbjct: 275 WSKRGSDFPPKIVVSSELPH------ELEIRNVEVGDAGTYRCTGSSTYGK 319
>gi|119609535|gb|EAW89129.1| sidekick homolog 2 (chicken), isoform CRA_d [Homo sapiens]
Length = 1790
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 210/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 199 CQAKGVPPPSITWYKDAAVVEVEKLTRFRQR----NDGGLQISGLVPD-DTGMFQCFARN 253
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 254 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 311
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 312 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 370
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 371 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 425
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 426 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 485
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 486 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 536
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 537 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 596
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 597 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 651
Query: 481 TIW 483
T W
Sbjct: 652 TEW 654
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 292 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 348
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 349 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 405
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 406 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 465
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 466 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 515
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 516 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 575
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 576 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 624
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 625 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 683
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 684 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 743
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 744 TTPGDGPRS 752
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 112/280 (40%), Gaps = 27/280 (9%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDP 61
+++T C A P + W ++G LL+ + D +R LTI NP D
Sbjct: 100 SEVTLECVANARPLIKLHIIWKKDGVLLSGG---ISDHNRR------LTIP--NPTGSDA 148
Query: 62 AMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A + + + A L VL P F K P E A V I C + P
Sbjct: 149 GYYECEAVLRSSSVPSVVRGAYLSVLE-PPQFVKEP-ERHITAEMEKVVDIPCQAKGVPP 206
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KD + + R + +G L IS + DD+G++ C A N G ++ L V
Sbjct: 207 PSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P T+ ++ L C T A W G RI + ++ P
Sbjct: 267 TSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRF 321
Query: 237 N-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 322 TPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 361
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 816 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 872
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 873 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 926
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 927 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 985
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 986 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1037
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 1038 TEYRVQVQAFNAIGSGPWSQTV 1059
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1464 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1522
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1523 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1577
Query: 474 GPES 477
GP S
Sbjct: 1578 GPRS 1581
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1271 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1329
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1330 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1377
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1378 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1437
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1438 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1480
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1170 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1228
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1229 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1280
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1281 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1338
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1339 --TSYKFRVKATNDIG 1352
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 961 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1018
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1019 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1070
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1071 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1129
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1130 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1158
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 132 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPSYYEQL 186
+G R+ I L+I D+G Y A N D + I L GP+
Sbjct: 25 AGCRQAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAP 84
Query: 187 PPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
I +A + L C A+ L+ + IW +GV L + I+
Sbjct: 85 TIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLSGGISDHN 135
Query: 241 GLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I N + +DAG YEC + S+V + + V PP V+ E H T+
Sbjct: 136 RRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPERHITAEME 192
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWST 356
+ D + + I TW+ + V +++ R+ R + ++ + LVP T
Sbjct: 193 KVVDIPCQAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDT 244
Query: 357 YEFKVIAGNELG 368
F+ A N G
Sbjct: 245 GMFQCFARNAAG 256
>gi|90183174|sp|Q8AV57.2|SDK2_CHICK RecName: Full=Protein sidekick-2; Flags: Precursor
Length = 2177
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 205/482 (42%), Gaps = 35/482 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+A GVP +W+++ L++ E L R+ + D L I L P+ D M+QC A+
Sbjct: 335 CQAKGVPPPDMAWYKDASLIHPEQL-----SRFQLLADGSLQISGLLPD-DTGMFQCFAR 388
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L V ++ P+ + P +S +G +V + C AP+P W+K I
Sbjct: 389 NAAGEVQTTTYLAVTSIAPNITRGPQDSTVI--DGMSVILNCETSGAPRPAITWQKGERI 446
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LL+SP D+G Y+C ATN G+DE+ L+V +
Sbjct: 447 LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVVW-ARTRITD 505
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + +DV YIW +G +G P + +D G L
Sbjct: 506 PPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEKDGAPLGTES-----GPRLRLDETGTLH 560
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P V + K + + W
Sbjct: 561 ISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQLPHAPESPVAVLSPLEKRAINLTWAKP 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
P+ Y + N N+ W V + E+ R LVP +Y+F++
Sbjct: 621 FDGNSPLLRYLVEISEN-NAPW-TVLLASVDPELTWVVVRG-------LVPARSYQFRLC 671
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G + S + + + P + P+ P + G + I W+P P QN Y
Sbjct: 672 AVNDVGRSQFSKDTERVSLPEEPPFAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLKGY 731
Query: 423 KI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
I + +Q K N + + + +T YE++V A N G G S VT
Sbjct: 732 IIRYCLAGLPVGYQ---FKNITNADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSMKVT 788
Query: 482 IW 483
W
Sbjct: 789 EW 790
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 14/238 (5%)
Query: 45 IQDNVLTIRYLNPER-DPAMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 100
I D + LNP D Y+C A + + A L VL P F K P E
Sbjct: 267 ISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLE-PPQFVKEP-ERHIT 324
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYS 158
A V I C + P P W KD ++I R ++ +G+L IS + DD+G++
Sbjct: 325 AEMEKVVAIPCQAKGVPPPDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQ 384
Query: 159 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
C A N G ++ L V + P T+ ++ L C T A W
Sbjct: 385 CFARNAAGEVQTTTYLAVTSIAPNITRGPQDSTVIDGMSVILNC--ETSGAPRPAITW-Q 441
Query: 219 NGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G RI + ++ P ++ G L ++ A DAG Y C+ ++ G ++V
Sbjct: 442 KGERI--LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVV 497
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 105/289 (36%), Gaps = 40/289 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 49 LVLTCMAEGSWPLEFKWLHNSRELTKFSL----EYRYMITSLDRT--------HAGFYRC 96
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF+ + GE + P A P+P+ W
Sbjct: 97 IVRNRMGALLQRQTEVQVAYMGSFEDSETQQSVSHGEAA---VIRAPRIASFPQPQVTWF 153
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 154 RDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVANVGG 213
Query: 180 PSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ +PP+ T +A + + C A+ L+ + IW +GV I +
Sbjct: 214 PADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPISS-------- 265
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 279
I+ L I N + D+G YEC + S+V ++ + V PP
Sbjct: 266 -GISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLEPP 313
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + ++ TI WT G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1838 ISRYGSAITIHWTSGDPGQGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMDILK 1896
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ V +Y+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1897 QGV-----SYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1931
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PS P + A P AP + L ++WEP P E QN
Sbjct: 1600 YEIRMSVYNAVGEGPPSPPQEVFVGEA-MPTGAPQNVAVKAATATQLDVTWEPPPTESQN 1658
Query: 417 APNIYYKI-FW---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW R+ ++ L E G V++ + YT Y V + A N G
Sbjct: 1659 GDIQGYKIHFWEAQRQNESARVKTLFLPETG------VKLKNLTGYTSYWVSIAAFNAAG 1712
Query: 473 PGPESEVVT 481
GP S VT
Sbjct: 1713 DGPRSTPVT 1721
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 37/264 (14%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ ++ I G PP LPG + +
Sbjct: 952 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSSSTISSGVPPELPGAPTNLGISN 1008
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWN---STWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ +++ A+ N W V H + E D +
Sbjct: 1009 IGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLV--HQLANEPDA----RSLE 1062
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ N L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1063 VPN-LNPYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRTASETSLWLR 1121
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV--RIPSEFY----- 457
W PL ++ N ++ Y+I + + + G + V+ R+ E+
Sbjct: 1122 WMPLLEQEYNGNPDSVGYRIRYLRSDGQ----------GRAVVHVIHDRVEREYTIEDLE 1171
Query: 458 -YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S +V
Sbjct: 1172 EWTEYRVQVQAFNAIGSGPWSHLV 1195
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W I Y++ R N + VSE V+G +
Sbjct: 1306 PGPPVGMLFPEVRTTSVRLIWQPPTAPNGIILAYQLTHRLNTTTANAAVSE-VLGPSTRQ 1364
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P +TY F + A G+GE + D+P Q PS+ +
Sbjct: 1365 YTATG-------LQPEATYLFSITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPLVRQE 1416
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWEP +P +Y + R+ E+ N VV F
Sbjct: 1417 DVRARSVLLSWEP--GSDGLSPVRFYTVQTRELPSGEWALHPASISHNATAFVVDRLKPF 1474
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1475 --TSYKFRVKATNDIG 1488
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P V+ +V S + W G+ P+ Y + R + W ++S +
Sbjct: 1407 PPSKPL-VRQEDVRARSVLLSWEPGSDGLSPVRFYTVQTRELPSGEWALHPASISHNATA 1465
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1466 FVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESESLTTLQAAPEEAPTIL 1513
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG------- 446
+ I W+P +K N + +++ +R+ + TL GN G
Sbjct: 1514 SVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYRELLYDSLRGFTLHGIGNPGATWAELT 1573
Query: 447 -IAVVRIPSEFYYTE-----------YEVKVQAINDVGPGPES 477
+ V SE T+ YE+++ N VG GP S
Sbjct: 1574 PVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVYNAVGEGPPS 1616
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGV 285
D LE PN+N T SF +V ++ + ++ ++ PP + P V
Sbjct: 1057 DARSLEVPNLN------PYTYYSFR--MRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANV 1108
Query: 286 QVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++W + NG P + Y+I R + HVI V+R
Sbjct: 1109 TLRTASETSLWLRWMPLLEQEYNGNPDSVGYRI--RYLRSDGQGRAVVHVIHDRVER--- 1163
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S T P PS +
Sbjct: 1164 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHLVLGRTRESVPSSGPSNVSAQATSSS 1219
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++ + W +P N + YK+ +++K D+E +++ GN + ++ + Y
Sbjct: 1220 NMLVRWSDIPEADCNGLILGYKVMFKEK-DSEARAQFWLAEGNTSRS-AQLTGLGKFMLY 1277
Query: 462 EVKVQAINDVGPG 474
E++V A +G G
Sbjct: 1278 EIRVLAFTRIGDG 1290
>gi|403280637|ref|XP_003931822.1| PREDICTED: protein sidekick-2 [Saimiri boliviensis boliviensis]
Length = 2172
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 210/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + SW+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 330 CRAKGVPPPSISWYKDAAVVEVEKLARFRQR----SDGGLQISGLVPD-DTGMFQCFARN 384
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 385 SAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 442
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 443 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + V Y+W +G +G M+ N P I +D G L I
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLG-MESN----PRIRLDRNGSLHI 556
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + W
Sbjct: 557 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKPF 616
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 617 DGNSPLIRYVLEMSEN-NAPW-----TVLLPSVD---PKATSVTVKGLVPARSYQFRLCA 667
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 668 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYV 727
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 728 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 782
Query: 481 TIW 483
T W
Sbjct: 783 TEW 785
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 140/379 (36%), Gaps = 52/379 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 92 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPQPQVTWF 148
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 149 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGG 208
Query: 180 P----SYYEQLPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P + +PPK T +A + L C A+ L+ + IW +GV L +
Sbjct: 209 PADPIAATIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLS 259
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 260 GGISDHNRRLTIPNPTASDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPER 316
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I +W+ + V +++ R+ R + ++ +
Sbjct: 317 HITAEMEKVVDIPCRAKGVPPPSI--------SWYKDAAVVEVEKLARFRQRSDGGLQIS 368
Query: 350 VLVPWSTYEFKVIAGNELG 368
LVP T F+ A N G
Sbjct: 369 GLVPDDTGMFQCFARNSAG 387
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 174/487 (35%), Gaps = 46/487 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 423 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 479
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V+ + K P + G ++ + ++VW+KDG +
Sbjct: 480 SRGVDEASADL-VVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATL 538
Query: 131 G--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 539 GMESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVA 598
Query: 189 KITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPNI----NIDGGLL 243
++ R + L + + + Y+ ++++E P ++D
Sbjct: 599 TLSTVERRAINLTWAKPFDGNSPLIRYV----------LEMSENNAPWTVLLPSVDPKAT 648
Query: 244 EITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 649 SVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIM 708
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL---- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 709 IQW-----QPPPESHQNGILKG------YVIRYCLAGLPVGYQFKNITDADVNNLLLEDL 757
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 758 IIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNAPS 816
Query: 412 REKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 817 PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCFTT 876
Query: 471 VGPGPES 477
G GP S
Sbjct: 877 PGDGPRS 883
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 39/283 (13%)
Query: 219 NGVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272
G RI + N T PN+ ++ +T + E ++ G+ +
Sbjct: 926 TGYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSAS 982
Query: 273 VIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWF 325
I G PP LPG + + + S T+Q+ G I+ + + A+ W
Sbjct: 983 TISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYNGKTSISRWLVEAQVGVVGEGEEWL 1042
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
V H + E D + + + L P++ Y F++ N +G PS PS + T
Sbjct: 1043 LV--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAP 1095
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYG 443
P AP+ + L + W PLP + N ++ YKI K + ++ +TL
Sbjct: 1096 PDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-- 1150
Query: 444 NVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ E+ +TEY V+VQA N +G GP S+ V
Sbjct: 1151 ---VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 1190
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPHEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRQNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 474 GPES 477
GP S
Sbjct: 1709 GPRS 1712
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P Q +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPVAQQE-DVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGVLLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYKVMYKEK-DSDAQPRFWLVEGNSSRS 1260
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPG 474
++ Y YEV+V A +G G
Sbjct: 1261 -AQLTGLGKYVLYEVRVLAFTRIGDG 1285
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 76/196 (38%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
YT L P S Y F++ A G+GE + D+P Q PSR
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPVAQQE 1411
Query: 399 KIGDLSI--SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ S+ SWE P +P YY I R+ + + N +V F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483
>gi|395826906|ref|XP_003786654.1| PREDICTED: protein sidekick-2 [Otolemur garnettii]
Length = 2202
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 211/485 (43%), Gaps = 41/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP +W+++ ++ E LP Q D L I L P+ D M+QC A+N
Sbjct: 360 CRAKGVPPPAITWYKDAAVVEVEKLPRFRQR----GDGSLQISSLVPD-DTGMFQCFARN 414
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 415 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 472
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 473 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITRP 531
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + Y+W +G +G M+ N P I +D G L +
Sbjct: 532 PQDQSVIKGTQASMVCGVTHDPRVTIRYVWEKDGAALG-MENN----PRIRLDKNGSLHV 586
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + + + + W
Sbjct: 587 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWAKPF 646
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKV 361
P+ Y + N N+ W V+ VD EA+ V LVP +Y+F++
Sbjct: 647 DGNSPLLRYVLEMSEN-NAPW-----TVLLASVD-----PEATSVTVKGLVPARSYQFRL 695
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 696 CAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKG 755
Query: 422 YKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 756 YIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSS 810
Query: 479 VVTIW 483
VT W
Sbjct: 811 KVTEW 815
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 181/491 (36%), Gaps = 54/491 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 453 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 509
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V + RP + ++ +G ++ C P+ ++VW+KDG
Sbjct: 510 SRGVDEASADLVVWAR--TRITRPPQDQSVI-KGTQASMVCGVTHDPRVTIRYVWEKDGA 566
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G + R ++ +NG+L +S D G Y+C + G D L V P E
Sbjct: 567 ALGMENNPRIRLDKNGSLHVSQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 626
Query: 187 PPKITIAAHRNLQLRCSAHTE---ELLDVAYIWTHNGVRIGNMDLNELETP----NINID 239
++ A R + L + + LL Y+ ++++E P ++D
Sbjct: 627 VATLSTAERRAINLTWAKPFDGNSPLLR--YV----------LEMSENNAPWTVLLASVD 674
Query: 240 GGLLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
+T A Y+ C V K K + + ++ E P P V
Sbjct: 675 PEATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTN 734
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL 351
S IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 735 QSIMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLL 783
Query: 352 ----VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 784 LEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTW 842
Query: 408 EPLPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 843 NAPSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 902
Query: 467 AINDVGPGPES 477
G GP S
Sbjct: 903 CFTTPGDGPRS 913
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 41/266 (15%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 977 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1033
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE-----VDRYTGRKE 344
+ S T+Q+ G I+ + + A+ VIG+ + + +G +
Sbjct: 1034 IGPRSVTLQFRPGYDGKTSISRWLVEAQVG-----------VIGEGEEWLLIHQLSGEPD 1082
Query: 345 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
A V L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 1083 ARSMEVPNLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETS 1142
Query: 403 LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 457
L + W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1143 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----MVQDRLEREYTIED 1194
Query: 458 ---YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S++V
Sbjct: 1195 LEEWTEYRVQVQAFNAIGSGPWSQMV 1220
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
V+ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1862 VIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1918
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1919 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1952
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 25/279 (8%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDP 61
+++T C A P + W ++G L+S + D +R LTI NP D
Sbjct: 261 SEVTMECVANARPLIKLHIMWKKDGAPLSSG---ISDYNRR------LTIP--NPTGSDA 309
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y+C A + + S + L++ P F K P E A V I C + P P
Sbjct: 310 GYYECEAILRSSSVPSVVRGAYLSVWEPPQFVKEP-ERHITAEMEKVVDIPCRAKGVPPP 368
Query: 120 KFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD ++ R + +G+L IS + DD+G++ C A N G ++ L V
Sbjct: 369 AITWYKDAAVVEVEKLPRFRQRGDGSLQISSLVPDDTGMFQCFARNAAGEVQTSTYLAVT 428
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+ P T+ ++ L C T A W G RI + ++ P
Sbjct: 429 SIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRFT 483
Query: 238 -IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 484 PLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 522
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PS P + A P AP + G L ++WEP P + QN
Sbjct: 1625 YEIRMSVYNTVGEGPPSPPQEVFVGEA-VPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1683
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1684 GDIQGYKIYFWEAQRPNFTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1738
Query: 474 GPES 477
GP S
Sbjct: 1739 GPRS 1742
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 24/260 (9%)
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283
G D +E PN+N T SF + V S + S K + P P
Sbjct: 1079 GEPDARSMEVPNLN------PFTYYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPA 1131
Query: 284 GVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDR 338
V + +TS ++W + NG P + YKI +R++ + + H++ ++R
Sbjct: 1132 NVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS---HMVQDRLER 1188
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
E +IE+ L W+ Y +V A N +G G P S T P P+ +
Sbjct: 1189 -----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQMVMSRTRESVPSSGPTNVSALAT 1241
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 458
+ + W +P +N + YK+ +++K D++ Q + GN + ++ Y
Sbjct: 1242 TSSSMLVRWSDVPEADRNGLVLGYKVMYKEK-DSDAQPRSWLVEGNSSRS-AQLTGLGKY 1299
Query: 459 TEYEVKVQAINDVGPGPESE 478
Y+V+V A VG G S
Sbjct: 1300 VLYQVQVLAFTRVGDGTPSH 1319
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 28/219 (12%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
PP P VQ +V S + W G+ P+ +Y + R + W S V
Sbjct: 1432 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWTLHSASV------ 1484
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
+ A I + L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1485 --SHNASAFIVDRLKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTILSVTP 1542
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI----- 452
+ I W+P +K N + ++I +R+ + TL+ N +
Sbjct: 1543 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPAATWAELTPMYS 1602
Query: 453 ------PSEFYY--------TEYEVKVQAINDVGPGPES 477
PS Y YE+++ N VG GP S
Sbjct: 1603 VRNLSRPSLTQYELDNLNKHRRYEIRMSVYNTVGEGPPS 1641
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1331 PGPPVGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1389
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1390 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1441
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY + R+ + + N +V F
Sbjct: 1442 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPSGRWTLHSASVSHNASAFIVDRLKPF 1499
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1500 --TSYKFRVKATNDIG 1513
>gi|225000048|gb|AAI72275.1| SDK2 protein [synthetic construct]
gi|225000918|gb|AAI72562.1| SDK2 protein [synthetic construct]
Length = 1851
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 210/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 9 CQAKGVPPPSITWYKDAAVVEVEKLTRFRQR----NDGGLQISGLVPD-DTGMFQCFARN 63
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 64 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 121
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 122 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 180
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 181 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 235
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 236 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 295
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 296 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 346
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 347 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 406
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 407 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 461
Query: 481 TIW 483
T W
Sbjct: 462 TEW 464
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 102 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 158
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 159 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 215
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 216 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 275
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 276 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 325
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 326 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 385
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 386 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 434
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 435 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 493
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 494 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 553
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 554 TTPGDGPRS 562
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 39/282 (13%)
Query: 220 GVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273
G RI + N T PN+ ++ +T + E ++ G+ +
Sbjct: 606 GYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 662
Query: 274 IVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFN 326
I G PP LPG + + + S T+Q+ G I+ + + A+ W
Sbjct: 663 ISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLL 722
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
+ H + E D + + + L P++ Y F++ N +G PS PS + T P
Sbjct: 723 I--HQLSNEPDA----RSMEVPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPP 775
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGN 444
AP+ + L + W PLP + N ++ YKI K + ++ +TL
Sbjct: 776 DMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH--- 829
Query: 445 VGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ ++ +TEY V+VQA N +G GP S+ V
Sbjct: 830 --VVQDRVERDYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 869
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1511 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1567
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1568 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1601
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164
V I C + P P W KD + + R + +G L IS + DD+G++ C A N
Sbjct: 5 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 64
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 65 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 120
Query: 225 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 121 -LASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 171
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1274 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1332
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1333 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1387
Query: 474 GPES 477
GP S
Sbjct: 1388 GPRS 1391
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1081 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1139
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1140 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1187
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1188 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1247
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1248 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1290
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 980 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1038
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1039 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1090
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1091 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1148
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1149 --TSYKFRVKATNDIG 1162
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 771 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 828
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 829 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 880
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 881 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 939
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 940 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 968
>gi|402900942|ref|XP_003913419.1| PREDICTED: protein sidekick-2-like, partial [Papio anubis]
Length = 1482
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 211/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 331 CRAKGVPPPSITWYKDAAVVEVEKLARFRQR----SDGGLQISGLVPD-DTGMFQCFARN 385
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 386 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 443
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 444 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 502
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + V YIW +G +G ++ N P I +D G L I
Sbjct: 503 PQDQSVIKGTQASMVCGVSHDPRVTVRYIWEKDGATLG-VESN----PRIRLDRNGSLHI 557
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 558 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 617
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 618 DGNSPLLRYVLEMSEN-NAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 668
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 669 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 728
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 729 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 783
Query: 481 TIW 483
T W
Sbjct: 784 TEW 786
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 139/380 (36%), Gaps = 53/380 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 92 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIHAPRIASFPRPQVTWF 148
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 149 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGG 208
Query: 180 PSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
P+ + PP + +A + L C A+ L+ + IW +G+ L
Sbjct: 209 PADLIRTPPSSSPPKNTRVVAGTSEVTLECVANARPLIKLHIIWKKDGM---------LL 259
Query: 233 TPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
+ I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 260 SGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPE 316
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE- 348
H T+ + D + + I TW+ + V +++ R+ R + ++
Sbjct: 317 RHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAVVEVEKLARFRQRSDGGLQI 368
Query: 349 NVLVPWSTYEFKVIAGNELG 368
+ LVP T F+ A N G
Sbjct: 369 SGLVPDDTGMFQCFARNAAG 388
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA- 417
F++ N +G PS PS + T P AP+ + L + W PLP + N
Sbjct: 983 FRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGN 1042
Query: 418 -PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAIND 470
++ YKI K + ++ +TL + R+ E+ +TEY V+VQA N
Sbjct: 1043 PESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNA 1094
Query: 471 VGPGPESEVV 480
+G GP S+ V
Sbjct: 1095 IGSGPWSQTV 1104
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1006 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1063
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1064 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1115
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1116 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 1174
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1175 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1203
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1316 PPSRPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASS 1374
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1375 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1422
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 446
+ I W+P +K N + ++I +R+ + TL+ N G
Sbjct: 1423 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPG 1475
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1215 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1273
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+G+ + D+P Q PSR +
Sbjct: 1274 YTATG-------LKPESVYLFRITAQTRKGWGDAAEALVVTTEKRDRP-QPPSRPVVQQE 1325
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1326 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASSFIVDRLKPF 1383
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1384 --TSYKFRVKATNDIG 1397
>gi|317418903|emb|CBN80941.1| Neurofascin, partial [Dicentrarchus labrax]
Length = 1241
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 209/491 (42%), Gaps = 51/491 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P W NG+ + S + R + D ++ R + A+YQC A N
Sbjct: 283 CRANGNPKPNIQWLINGQPVESSP---PNPSRQELGDTII-FRSVQ-MGSSAVYQCNASN 337
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
Q ++A + VL + P P E + C +P P+ W K+G
Sbjct: 338 QHGYLLANAFVSVLDMPPRMLG-PKNQLIKVIENNRTFLDCPFFGSPLPELRWFKNGQGS 396
Query: 131 G-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
G GG+ +++ NG L I +D G Y+C A ++ G E++ RL V P+ + P
Sbjct: 397 GLDGGQYRVYINGTLEIKRARAEDEGTYTCLANSILGSAENQVRLEVKE-PTRIVRAPEH 455
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
+ + C ++ L + WT + + NM + D L I N +
Sbjct: 456 QSAIRGSTARFNCKVKSDPTLPITVTWTKDDKPL-NMGWR------LRKDEESLTIPNVN 508
Query: 250 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ---------------VVEVHKTS 294
D G Y C VKS + + S + V L V + + S
Sbjct: 509 EGDEGTYSCTVKSEIDQDSASARLTVLEEASLNPSVSSALPPDRPDPPIDLDLSDPAARS 568
Query: 295 ATIQWTDGATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+ W G + P+T + + N W W N+S Y G + I L
Sbjct: 569 IRLTWIPGNDHRSPVTQFLVQFEENRWEPGRWQNLST---------YPGDLNSVILQ-LA 618
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y+F+VIA N +G +PS PS +Y T P P + G G K ++ ISWEPL
Sbjct: 619 PFVNYQFRVIAINSVGQSKPSRPSLRYKTSGAAPDAIPKGLRGWGSKKDNMEISWEPLLD 678
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAIND 470
++N PN+ Y ++WR+K E +E+ NV + + + Y YE+K+QA+N+
Sbjct: 679 LERNGPNLRYNVWWRRK-------ELEEEWNNVTTMESKYVVQNTETYVPYEIKIQAMNE 731
Query: 471 VGPGPESEVVT 481
GPGPES VVT
Sbjct: 732 FGPGPESNVVT 742
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 116 APKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGR 173
+P P W K G + + R+ FEN N L I VS +D+G Y C A N G
Sbjct: 198 SPTPTVKWFKKGGDLPA--RKVKFENYNKTLKIINVSEEDAGEYVCMANNHLGSIRHSIF 255
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ V P Y+ P + +A N +L C A+ ++ W NG + + N
Sbjct: 256 VQVKAAP-YWLDKPTNLVLAPDENGRLVCRANGNPKPNIQ--WLINGQPVESSPPN---- 308
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPGG----VQVV 288
P+ G + + + Y+C + G + V +++ PP + G ++V+
Sbjct: 309 PSRQELGDTIIFRSVQMGSSAVYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVI 368
Query: 289 EVHKT 293
E ++T
Sbjct: 369 ENNRT 373
>gi|410920619|ref|XP_003973781.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Takifugu rubripes]
Length = 1151
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 208/484 (42%), Gaps = 35/484 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+D+ C A G P +W NG L P +R + D + + + D A+Y
Sbjct: 347 SDVLIKCSASGTPQPAVTWRVNGAPLQDSPSP----NRRVLGDTI--VLHNTKASDSAVY 400
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVW 123
QC A N+ T S+A + ++ L P + + E Y+ EG V + C ++P W
Sbjct: 401 QCEASNRHGTLLSNANIMIMNLPPMILTQ--DDEDYSAVEGKGVMMHCKVFSSPPSAITW 458
Query: 124 KKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
KD G R + +NG L I ++DSG Y+C A N G + ++ + P+
Sbjct: 459 SKDDTSDSVEGPRFSVHDNGTLEIYSAEKEDSGPYTCFAKNTEG-SSAINVMLSVKDPTR 517
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P + I Q C A ++ D +W + I N E I+
Sbjct: 518 IMEPPEDLRILKGTTAQFSCLAEYDKSFSDDFEILWEKDDKEIA---FNYTENSRYFIED 574
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G+L+I N S D G Y C+ ++ + ++V P P + + E S ++W
Sbjct: 575 GILQIVNVSHRDQGVYTCLARTPMDGDKAAALLLVLDVPDAPQYLVLSEHKSQSVKLKWI 634
Query: 301 DGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
G + T + I + W W KE+ R G ++I L Y
Sbjct: 635 PGDDHNSSTTEFIIQYEESQWEPGNW---------KELLRVPGNHNSAILK-LHGHVDYC 684
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V N +G G PS P+ +Y TP P + P I +++I+WEPL + N P
Sbjct: 685 FRVSGVNAVGRGPPSQPTERYRTPPAAPDKNPENIKIESHMPQEMNINWEPLLPIEHNGP 744
Query: 419 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ YK+ +R+++ + ++Q +K + V V P+ + YE+K+QA N G GPE
Sbjct: 745 GLEYKVSYRRQDVEEDWQEHIVKRHSFV---VKNTPT---FVPYEIKIQARNHQGWGPEP 798
Query: 478 EVVT 481
+ T
Sbjct: 799 RIKT 802
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 40/285 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L C A G P W + G+ L ++ +E + I +V + D Y
Sbjct: 259 ELILECIAAGFPTPQVEWVKMGQHLPTKA-KMESHGKLLIVPDV-------EQEDGGKYM 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C+AKN + + ++ P + P ES+ + G +V I C+ P+P W+
Sbjct: 311 CKAKNTVGEAVHYFTV-IVEEPPEWVSEP-ESQ-LSMIGSDVLIKCSASGTPQPAVTWRV 367
Query: 126 DGNIIG---SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G + S RR + +++ DS +Y C A+N HG S +++++
Sbjct: 368 NGAPLQDSPSPNRRVL--GDTIVLHNTKASDSAVYQCEASNRHGTLLSNANIMIMN---- 421
Query: 183 YEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
LPP I + + + + C + A W+ + + +E P
Sbjct: 422 ---LPPMILTQDDEDYSAVEGKGVMMHCKVFSSP--PSAITWSKDDTS------DSVEGP 470
Query: 235 NINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
++ D G LEI +A D+G Y C K+T G + + V+ P
Sbjct: 471 RFSVHDNGTLEIYSAEKEDSGPYTCFAKNTEGSSAINVMLSVKDP 515
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 83 VLTLKPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN 141
+L +PS P ++SET +G + + C P P+ W K G + + + K+ +
Sbjct: 235 ILQRRPSIMTPPGVKSETQLVKGEELILECIAAGFPTPQVEWVKMGQHLPT--KAKMESH 292
Query: 142 GNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 200
G LLI P V ++D G Y C A N G +IV P + + ++++ ++ +
Sbjct: 293 GKLLIVPDVEQEDGGKYMCKAKNTVGEAVHYFTVIVEEPPEWVSEPESQLSMIG-SDVLI 351
Query: 201 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+CSA A W NG L + +PN + G + + N +D+ Y+C
Sbjct: 352 KCSASGTP--QPAVTWRVNGA-----PLQDSPSPNRRVLGDTIVLHNTKASDSAVYQCEA 404
Query: 261 KSTVGKISTKTTVIVEGPPGL 281
+ G + + +++ P +
Sbjct: 405 SNRHGTLLSNANIMIMNLPPM 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 107/279 (38%), Gaps = 17/279 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPL----EDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
CEA G P+ + W +NG+ + P + + I +N Y +Y+C
Sbjct: 61 CEAKGNPEPEFRWTKNGQQFDPSLDPRLITEGNSGTFVIPNNGNLTEYQ------GIYRC 114
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKK 125
A N+L T S ++ P F K +E EG + CN P+ P + W
Sbjct: 115 FASNRLGTAISREIEFIVPNVPKFPKETIEP-VVVEEGQPFILNCNPPDGIPPLQIYWMT 173
Query: 126 -DGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTAT--NVHGMDESKGRLIVLHGPS 181
I R + NG+L S V +D Y C A + + + +++ +
Sbjct: 174 LSLQHIEQDERVSMGLNGDLYFSHAVDKDSRRDYCCFAAFPRIRTIVQKTAMSVIVKTTN 233
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLD-VAYIWTHNGVRIGNMDLNELETPNINIDG 240
Q P I + + E +L+ +A + V M + + G
Sbjct: 234 AILQRRPSIMTPPGVKSETQLVKGEELILECIAAGFPTPQVEWVKMGQHLPTKAKMESHG 293
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
LL + + D G+Y C K+TVG+ TVIVE PP
Sbjct: 294 KLLIVPDVEQEDGGKYMCKAKNTVGEAVHYFTVIVEEPP 332
>gi|7959295|dbj|BAA96038.1| KIAA1514 protein [Homo sapiens]
Length = 1598
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 210/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 7 CQAKGVPPPSITWYKDAAVVEVEKLTRFRQR----NDGGLQISGLVPD-DTGMFQCFARN 61
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 62 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 119
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 120 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 178
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 179 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 233
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 234 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 293
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 294 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 344
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 345 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 404
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 405 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 459
Query: 481 TIW 483
T W
Sbjct: 460 TEW 462
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 100 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 156
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 157 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 213
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 214 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 273
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 274 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 323
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 324 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 383
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 384 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 432
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 433 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 491
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 492 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 551
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 552 TTPGDGPRS 560
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 624 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 680
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 681 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 734
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 735 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 793
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 794 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 845
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 846 TEYRVQVQAFNAIGSGPWSQTV 867
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164
V I C + P P W KD + + R + +G L IS + DD+G++ C A N
Sbjct: 3 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 62
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 63 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 118
Query: 225 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 119 -LASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 169
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1272 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1330
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1331 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1385
Query: 474 GPES 477
GP S
Sbjct: 1386 GPRS 1389
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1079 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1137
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1138 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1185
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1186 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1245
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1246 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1288
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 978 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1036
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1037 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1088
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1089 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1146
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1147 --TSYKFRVKATNDIG 1160
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 769 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 826
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 827 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 878
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 879 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 937
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 938 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 966
>gi|148223934|ref|NP_001085487.1| neuronal cell adhesion molecule precursor [Xenopus laevis]
gi|49117906|gb|AAH72835.1| MGC80200 protein [Xenopus laevis]
Length = 1177
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 216/505 (42%), Gaps = 46/505 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D + C A G P + +W NG ++ E P D R D ++ + + A+YQ
Sbjct: 366 DGSLICRASGNPTPSITWLING--VSIELAPT-DASRRVDGDTIIFSKVQDGAT--AVYQ 420
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWK 124
C N+ ++A + VL P + Y NV + C +PKP+ W
Sbjct: 421 CNVSNKYGYLLANAFVNVLAEPPRIM---VLKHVYKVIANNVALLHCPFFGSPKPEIKWF 477
Query: 125 K--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
K G+I+ G +NG L I +D SG Y+C ATN G + L + P+
Sbjct: 478 KGVHGSILHGNGYV-FHDNGTLEIPVAQKDSSGNYTCVATNTFGSVKDMIGLQI-KDPTM 535
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ P I + + C + L +W + D L + G
Sbjct: 536 IIKQPEYRVIQRYGSAHFECRVKHDPTLKPVVLWLKD-------DSELLNDERFKMTKGH 588
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N + D G Y CV + + +S + V P P +++ + H+ S + W G
Sbjct: 589 LTIKNVTEKDEGTYTCVANTDLDTVSASAVLTVVDRPNHPFDLELTDHHERSVQLSWVPG 648
Query: 303 ATNGRPITHYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
N PIT++ I + ++ V G + A++ L P+ Y F+V
Sbjct: 649 DDNNSPITNFMIEYEDAMHDPGIWHFQAKVSGTQT-------TATLS--LSPFVNYSFRV 699
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
IA NE+G +PS S QY T +P + PS I G G + +L I+WEP+ N P +
Sbjct: 700 IAVNEIGSSDPSESSEQYMTKPAEPDKNPSGIKGVGTEPDNLVIAWEPIKGFDSNGPGLQ 759
Query: 422 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
YK+ WR+K+ D E+ S + NV +V F YE+KVQA+ND+G P
Sbjct: 760 YKVSWRQKDFDDEWTSIIV---ANVSKYIVSGTPTF--EPYEIKVQALNDIGYAP----- 809
Query: 481 TIWHDPLVIISYVCQGDLKLCLPRD 505
DP VII Y + DL + P +
Sbjct: 810 ----DPSVIIGYSGE-DLPMTAPSN 829
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 16/170 (9%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLNP 57
+D + + CEA G P ++SW RNG + D+D Y L I +N
Sbjct: 47 VDPRESIVIQCEAKGKPPPSFSWTRNGTHFDI------DKDPYVTMKPNSGTLVINTMNG 100
Query: 58 ERDPAM---YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 114
R A YQC A+N + S+ + + P + K +E +G + + CNP
Sbjct: 101 ARVDAYEGEYQCTARNDRGSALSNNIVIRQSRSPLWTKEKIEP-IVLQQGVPLVLPCNPP 159
Query: 115 AAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTA 161
P ++ D + +++ + NG+L S V +D+ Y C A
Sbjct: 160 KGLPPPIIFWMDNSFQKLPQNKRVSQGLNGDLYFSNVQPEDTRDFYICYA 209
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 15/173 (8%)
Query: 111 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMD 168
C E P P+ W+K+ + +G R +EN N L I V+ D+G Y C N+ G
Sbjct: 281 CIAEGLPTPEIHWRKESADLPAG--RVFYENFNKTLRIIDVTEADAGKYKCIGRNILGTT 338
Query: 169 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ V P Y+ P I ++ + L C A + W NGV I
Sbjct: 339 HHIITVNVKSSP-YWISPPTNIVLSPGEDGSLICRASGNPTPSIT--WLINGVSI----- 390
Query: 229 NELETPNIN--IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
EL + + +DG + + Y+C V + G + V V P
Sbjct: 391 -ELAPTDASRRVDGDTIIFSKVQDGATAVYQCNVSNKYGYLLANAFVNVLAEP 442
>gi|47224415|emb|CAG08665.1| unnamed protein product [Tetraodon nigroviridis]
Length = 920
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 136/290 (46%), Gaps = 19/290 (6%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D T +C A G P+ W +NGELL DR + LT D
Sbjct: 314 DLGSDYTMSCVASGKPEPQIRWMKNGELL----------DRKEMSFRSLTFD------DS 357
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A N+ Y++A+LRV P+F+ PL+ A G V I C P+ APKP F
Sbjct: 358 GMYQCIAANRHGVIYANAELRVFACAPTFRHNPLK-RVLAPRNGRVVIKCRPKGAPKPTF 416
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W KD ++ + R I+E+G+L I V+R D G Y+C A N G S G L+VL +
Sbjct: 417 TWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLES-T 475
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P + A N + C+A + LD+A+IW+ +G I + D E
Sbjct: 476 KITLAPSSADVKAGENALMHCAASHDPSLDIAFIWSLDGHVIDLHTDSQHYERGTNGSSN 535
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
G L I NA AG Y C ++ + ++ ++V PP + G + V
Sbjct: 536 GALLIKNAQLKHAGRYTCTAQTPIDNVAASAHLVVRAPPDVEGNAEKATV 585
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/526 (25%), Positives = 221/526 (42%), Gaps = 83/526 (15%)
Query: 6 DLTWTCEAFG--VPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
++T C A G VPD+ + +GEL ++ + + + +++ D
Sbjct: 229 NITLECFALGNPVPDIMWKKV-DGELPSNHEVRTAGAHLH-----LFNVQF----EDSGT 278
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y+C A N Y +A+L V P + + +E G + T+ C P+P+ W
Sbjct: 279 YKCEAVNSKGKDYHTARLSVEAF-PEWVEHITNTEK--DLGSDYTMSCVASGKPEPQIRW 335
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K+G ++ + + ++ DDSG+Y C A N HG+ + L V +
Sbjct: 336 MKNGELL---------DRKEMSFRSLTFDDSGMYQCIAANRHGVIYANAELRVFACAPTF 386
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
P K +A RN ++ + + W+ + + N T + G L
Sbjct: 387 RHNPLKRVLAP-RNGRVVIKCRPKGAPKPTFTWSKDTELLSN------STRVFIWEDGSL 439
Query: 244 EITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP------------------------ 278
EI N + AD G Y C ++ GK ST + +++E
Sbjct: 440 EILNVTRADEGRYTCFAENDRGKANSTGSLLVLESTKITLAPSSADVKAGENALMHCAAS 499
Query: 279 --PGLPGGV------QVVEVHKTSATIQW-TDGATNG---------RPITHYKIIARTNW 320
P L V+++H S + T+G++NG + Y A+T
Sbjct: 500 HDPSLDIAFIWSLDGHVIDLHTDSQHYERGTNGSSNGALLIKNAQLKHAGRYTCTAQTPI 559
Query: 321 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 380
++ S H++ + G E + L PW+ YEF+VIA N LG GEPSSPSP+
Sbjct: 560 DNV--AASAHLVVRAPPDVEGNAEKATVVDLFPWTEYEFRVIAANTLGTGEPSSPSPKEK 617
Query: 381 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 440
T P APS I GGGG +L+I+W P+ + PN Y + +R ++ E++ +
Sbjct: 618 TLDAIPVVAPSNISGGGGTSRELTITWTPVQPQHYYGPNFGYIVAFRPYDNREWRKVMVA 677
Query: 441 EYGNVGIAVVRIPSEFYY---TEYEVKVQAINDVGPGPESEVVTIW 483
+ +A I + + T+++VKV+A N G GP S I+
Sbjct: 678 D----PLARSYIHKDLTFPPLTKFQVKVKAFNSKGEGPFSLAAVIY 719
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 106/290 (36%), Gaps = 34/290 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W ++ N+E + Y + L I E+ Y C
Sbjct: 30 ITMNCRARASPPATYKWRKD----NTEIDFSAEGSHYSLMGGNLVISSPVKEQHVGNYSC 85
Query: 67 RAKNQLK---TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE----AAPKP 119
A N +R +S Q L L S ++ + Y EG + C P A
Sbjct: 86 LAANAFGAVVSREASVQFGYLDLFSSEEREAV----YVKEGQGAVLLCAPPPHYPAELSF 141
Query: 120 KFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL- 177
+++ + I RR + + GNL IS V DSG YSC A++ I L
Sbjct: 142 RWILNEFPTFIPLDKRRFVSQITGNLYISKVDSSDSGNYSCIASSPSISKSVFSNYIPLV 201
Query: 178 -----HGPSYYEQLP---PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
H Y L P T +N+ L C A + D+ +W +D
Sbjct: 202 PLSERHNRKYPADLNVKFPDTTALVGQNITLECFALGNPVPDI--MWK-------KVDGE 252
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ G L + N F D+G Y+C ++ GK + VE P
Sbjct: 253 LPSNHEVRTAGAHLHLFNVQFEDSGTYKCEAVNSKGKDYHTARLSVEAFP 302
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 23/172 (13%)
Query: 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGI 156
+T A G N+T+ C P P +WKK DG + + R +L + V +DSG
Sbjct: 221 DTTALVGQNITLECFALGNPVPDIMWKKVDGELPSNHEVRTA--GAHLHLFNVQFEDSGT 278
Query: 157 YSCTATNVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYI 215
Y C A N G D RL V P + E + + + + + S E +
Sbjct: 279 YKCEAVNSKGKDYHTARLSVEAFPEWVEHITNTEKDLGSDYTMSCVASGKPEPQIR---- 334
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
W NG EL +D + + +F D+G Y+C+ + G I
Sbjct: 335 WMKNG---------EL------LDRKEMSFRSLTFDDSGMYQCIAANRHGVI 371
>gi|444727882|gb|ELW68360.1| Protein sidekick-2 [Tupaia chinensis]
Length = 2167
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 213/485 (43%), Gaps = 41/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 328 CRAKGVPPPSITWYKDAAVVEVEKLTRFRQR----GDGGLQISGLVPD-DTGMFQCFARN 382
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 383 TAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLVCETSGAPRPAITWQKGERIL 440
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LL+SP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 441 ASGSVQLPRFTLLESGSLLVSPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITRP 499
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P + + C A + + V Y+W +G +G +D N P I +D G L I
Sbjct: 500 PQDQNVIKGTQASMVCGATHDPRVTVRYVWEKDGATLG-VDSN----PRIRLDKNGSLHI 554
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + + + + W
Sbjct: 555 SQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTTERRAINLTWAKPF 614
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKV 361
P+ Y I+ + N+ W V+ VD EA+ V LVP +Y+F++
Sbjct: 615 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD-----PEATSVMVKGLVPARSYQFRL 663
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 664 CAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKG 723
Query: 422 YKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 724 YIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNGAGLGVYSS 778
Query: 479 VVTIW 483
VT W
Sbjct: 779 KVTEW 783
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 945 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1001
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1002 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVIGEGEEWLLI--HQLANEPDA----RSME 1055
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1056 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1114
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + R+ E+ +
Sbjct: 1115 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1166
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 1167 TEYRVQVQAFNAIGSGPWSQTV 1188
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1591 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1649
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1650 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1703
Query: 473 PGPES 477
GP S
Sbjct: 1704 DGPRS 1708
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1828 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1884
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1885 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1918
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 133/381 (34%), Gaps = 58/381 (15%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L Y I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTRFSL------EYMITSLDRT--------HAGFYRC 89
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 90 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPRPQVTWF 146
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
++G I R I L+I D+G Y A N D + I L G
Sbjct: 147 REGRKIPPSSRIAITLENPLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGG 206
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNEL 231
P+ I +A + + C A+ L+ + +W +G + G D N
Sbjct: 207 PADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGALVSGGMSDFNR- 265
Query: 232 ETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
L I N + +DAG YEC + S+V + + V PP V+
Sbjct: 266 ----------RLTIPNPTSSDAGYYECEAVLRSSSVAPVVRGAYLSVLEPPQF---VKEP 312
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E H T+ + D + + I TW+ + V +++ R+ R + ++
Sbjct: 313 ERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRGDGGLQ 364
Query: 349 -NVLVPWSTYEFKVIAGNELG 368
+ LVP T F+ A N G
Sbjct: 365 ISGLVPDDTGMFQCFARNTAG 385
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 24/257 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D +E P++N T SF + V S + S K + P P V
Sbjct: 1050 DARSMEVPDLN------PFTYYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVT 1102
Query: 287 VVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++W + NG P + YKI +R++ + + HV+ V+R
Sbjct: 1103 LRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS---HVVQDRVER--- 1156
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S + T P P+ +
Sbjct: 1157 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSSGPANVSALATTSS 1212
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+ + W +P N + YK+ +R+K D++ Q GN + ++ Y Y
Sbjct: 1213 SMLVRWSEVPEADHNGLVLGYKVMYREK-DSDSQPRFWLVEGNSSRS-AQLTGLGKYVLY 1270
Query: 462 EVKVQAINDVGPGPESE 478
EV+V A +G G S
Sbjct: 1271 EVQVLAFTRIGDGSPSH 1287
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 84/219 (38%), Gaps = 38/219 (17%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
PP P VQ +V S + W G+ P+ +Y + R E G+
Sbjct: 1408 PPSKPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTVQTR-----------ELPSGR--- 1452
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
GR AS L P+++Y+F+V A N++G E S S T P AP +
Sbjct: 1453 --GGRHPAS--GRLKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDDAPIILSVTP 1508
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ I W+P +K N + ++I +R+ + TL+ N G + S +
Sbjct: 1509 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSMYS 1568
Query: 458 -------------------YTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1569 IRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1607
>gi|348578155|ref|XP_003474849.1| PREDICTED: neurofascin isoform 4 [Cavia porcellus]
Length = 1239
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 210/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 359 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 410
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 411 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 469
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 470 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIF 526
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P + +QL C + L + W + + IGN E ++
Sbjct: 527 RMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMKKEDDS--------- 577
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 578 LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLEL 637
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 638 TDLAERSVRLTWIPGDDNNSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 690
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 691 LQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 749
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 750 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRV 802
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 803 QAENDFGKGPEPDTV 817
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 54 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 111 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 169
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 170 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 229
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 230 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 285
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 286 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 338
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 264 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 316
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 317 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 373
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 374 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 427
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 428 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 481
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 482 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 522
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 212 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 271
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 272 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 330 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 384
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 385 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 433
>gi|397484478|ref|XP_003813403.1| PREDICTED: protein sidekick-2 [Pan paniscus]
Length = 2172
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 209/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 330 CRAKGVPPPSITWYKDAAVVEVEKLTRFRQR----SDGGLQISGLVPD-DTGMFQCFARN 384
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 385 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 442
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 443 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 556
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 557 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 616
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 617 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 667
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 668 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 727
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 728 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 782
Query: 481 TIW 483
T W
Sbjct: 783 TEW 785
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 423 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 479
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 480 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 536
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 537 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 596
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 597 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 646
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 647 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 706
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 707 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 755
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 756 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 815 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 874
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 875 TTPGDGPRS 883
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 136/379 (35%), Gaps = 52/379 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 92 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPQPQVTWF 148
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 149 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGG 208
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ I +A + L C A+ L+ + IW +GV L +
Sbjct: 209 PADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLS 259
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 260 GGISDHNRRLTIPNPTSSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPER 316
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V +++ R+ R + ++ +
Sbjct: 317 HITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRSDGGLQIS 368
Query: 350 VLVPWSTYEFKVIAGNELG 368
LVP T F+ A N G
Sbjct: 369 GLVPDDTGMFQCFARNAAG 387
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ + +TL + + R+ E+ +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGRGKTLSQ-----VVQDRVEREYTIEDLEEW 1168
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQTV 1190
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 474 GPES 477
GP S
Sbjct: 1709 GPRS 1712
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGRGKTLS-- 1149
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
V+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -QVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289
>gi|348510471|ref|XP_003442769.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Oreochromis niloticus]
Length = 1348
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 219/497 (44%), Gaps = 49/497 (9%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAM 63
+D+ C A G+P T +W NG L ++R I D TI N + D A+
Sbjct: 355 SDVHIKCSASGIPQPTTTWRVNGGPLQESPA----RNRRVIGD---TIVIHNAQVSDSAV 407
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFV 122
YQC A N+ T S+A + ++ L+P E E Y+ E VT+ C ++P
Sbjct: 408 YQCEASNRHGTILSNANIMIMNLQPMILTS--EGEEYSVVERKGVTMHCKVFSSPPSTIT 465
Query: 123 WKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W KD + G R + ENG+L I V R D+G Y+C A N G L V P+
Sbjct: 466 WSKDDSPESVHGPRFTVHENGSLKIYNVERGDTGQYTCLAKNTEGSSAINAMLYV-KDPT 524
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINID 239
P I QL C A ++ D +W + + I LN ++
Sbjct: 525 RIVVAPEDQRILIGTTAQLSCLAEYDKSFSNDFELLWEKDDMEIA---LNYTVNSRYFVE 581
Query: 240 GGLLEITNASFADAGEYECVVKS------------TVGKISTKTTVIVEGPPGLPGGVQV 287
G+ I N S +D G Y CV K+ +G+++ + P P + +
Sbjct: 582 NGVFHIMNVSHSDQGVYRCVAKTPADQDVASALLMVLGELTCERCFCFGDVPDAPENLVL 641
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKEA 345
+ + T++W G + T + I ++W S W KE+ R G +
Sbjct: 642 SDRKGRNVTLKWVPGDDHNSSTTEFIIEYEESHWEPSNW---------KELLRVPGNRN- 691
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
S E L Y F+V A N +G G PS + +Y TP + P + P I G ++ I
Sbjct: 692 SAELRLNGNVDYCFRVSAVNAVGTGRPSEATERYKTPPEAPDRNPENIRIEGHLPHEMDI 751
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
WEPL + N P++ YK+ +R+++ + +++ T+K + V V P+ + YE+K
Sbjct: 752 KWEPLLPIEHNGPSLEYKVSYRRQDVEEDWKEHTVKRHSFV---VRNTPT---FVPYEIK 805
Query: 465 VQAINDVGPGPESEVVT 481
+QA N G GPE ++VT
Sbjct: 806 IQAKNRQGFGPEPKLVT 822
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 72 LKTRYSSAQLR---VLTLKPSFKKRPL-ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+KTR S + +L KPS P +SE +G ++ + C E P P+ WKK G
Sbjct: 229 VKTRKSDSSENANAILERKPSLLTPPGGKSEIQLVKGEDLNLECIAEGFPTPQVEWKKMG 288
Query: 128 NIIGSGGRRKIFEN-GNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ S R FEN G L+I P ++DSG Y C A N G + + V P + +
Sbjct: 289 HKFPSKVR---FENHGKLVIVPRAEQEDSGNYMCKAKNPLGEVQHTFTVTVEEPPEWVFE 345
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++++ ++ ++CSA + W R+ L E N + G + I
Sbjct: 346 PESQLSMIG-SDVHIKCSASG--IPQPTTTW-----RVNGGPLQESPARNRRVIGDTIVI 397
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIV 275
NA +D+ Y+C + G I + +++
Sbjct: 398 HNAQVSDSAVYQCEASNRHGTILSNANIMI 427
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 112/298 (37%), Gaps = 47/298 (15%)
Query: 11 CEAFGVPDVTYSWFRNGE----LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
CEA G P+ + W +N + L+ + E+ + I +N Y Y+C
Sbjct: 61 CEAKGNPEPEFRWTKNDQEFDPFLDPRLMKEENSGTFVIPNNGNLTEY------QGTYRC 114
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N+L S ++ P F K L+ EG T+ C+P P ++
Sbjct: 115 YASNKLGIAISKEIEFIVPNVPKFPKETLDP-VVVEEGQPFTLKCDPPNGIPPLQIYWMT 173
Query: 127 GNI--IGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTAT-----------------NVHG 166
N+ I R + NG+L S V +D Y C A+
Sbjct: 174 INLQHIEQDQRVSVGLNGDLYFSHAVEKDSRRDYCCFASFPRIRTIVQKTAMSVIVKTRK 233
Query: 167 MDESK-GRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
D S+ I+ PS PP +I + +L L C A V +
Sbjct: 234 SDSSENANAILERKPSLL--TPPGGKSEIQLVKGEDLNLECIAEGFPTPQVEW------K 285
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++G+ +++ N G L+ + A D+G Y C K+ +G++ TV VE PP
Sbjct: 286 KMGHKFPSKVRFEN---HGKLVIVPRAEQEDSGNYMCKAKNPLGEVQHTFTVTVEEPP 340
>gi|332848956|ref|XP_511658.3| PREDICTED: protein sidekick-2 [Pan troglodytes]
Length = 2172
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 209/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 330 CRAKGVPPPSITWYKDAAVVEVEKLTRFRQR----SDGGLQISGLVPD-DTGMFQCFARN 384
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 385 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 442
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 443 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 556
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 557 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 616
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 617 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 667
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 668 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 727
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 728 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 782
Query: 481 TIW 483
T W
Sbjct: 783 TEW 785
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 423 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 479
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 480 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 536
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 537 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 596
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 597 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 646
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 647 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 706
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 707 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 755
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 756 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 815 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 874
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 875 TTPGDGPRS 883
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 136/379 (35%), Gaps = 52/379 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 92 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPQPQVTWF 148
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 149 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGG 208
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ I +A + L C A+ L+ + IW +GV L +
Sbjct: 209 PADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLS 259
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 260 GGISDHNRRLTIPNPTSSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPER 316
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V +++ R+ R + ++ +
Sbjct: 317 HITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRSDGGLQIS 368
Query: 350 VLVPWSTYEFKVIAGNELG 368
LVP T F+ A N G
Sbjct: 369 GLVPDDTGMFQCFARNAAG 387
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 39/283 (13%)
Query: 219 NGVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272
G RI + N T PN+ ++ +T + E ++ G+ +
Sbjct: 926 TGYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSAS 982
Query: 273 VIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWF 325
I G PP LPG + + + S T+Q+ G I+ + + A+ W
Sbjct: 983 TISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWL 1042
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+ H + E D + + + L P++ Y F++ N +G PS PS + T
Sbjct: 1043 LI--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAP 1095
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYG 443
P AP+ + L + W PLP + N ++ YKI K + ++ +TL
Sbjct: 1096 PDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-- 1150
Query: 444 NVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ E+ +TEY V+VQA N +G GP S+ V
Sbjct: 1151 ---VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 1190
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 474 GPES 477
GP S
Sbjct: 1709 GPRS 1712
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483
>gi|348543836|ref|XP_003459388.1| PREDICTED: neurofascin-like [Oreochromis niloticus]
Length = 1342
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 214/498 (42%), Gaps = 65/498 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P W NG+ + S + +R + D ++ R + A+YQC A N
Sbjct: 359 CRANGNPKPHIEWLVNGQPIESSPT---NPNRQVLGDTII-FRSVQIGSS-AVYQCNASN 413
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ ++A + VL L P P + + C +P P+ W K+G
Sbjct: 414 EHGYLLANAFVNVLDLPPRMLG-PKNQLIKVIKNNRTFLDCPFFGSPLPELRWFKNGQGS 472
Query: 131 G-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
G GG+ +++ NG L I +D G Y+C A+++ G E++ RL V P+ Q P
Sbjct: 473 GLDGGQYRVYINGTLEIKRAQAEDEGTYTCVASSILGKAENQVRLEVKE-PTRIIQAPEH 531
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHN------GVRIGNMDLNELETPNINIDGGLL 243
+ + C ++ L V+ W + G R+ D L PN+N
Sbjct: 532 QSAIRGSTARFTCRVTSDPSLPVSVAWMKDDKPLYLGWRLKKDD-ESLSIPNVNE----- 585
Query: 244 EITNASFADAGEYECVVKSTVGKIST--KTTVIV---------------EGPPGLPGGVQ 286
D G Y C VKS + ++S + TV+V P P +
Sbjct: 586 -------GDEGTYTCTVKSEIDQLSASARLTVLVCFCVSDTSKAMSCLSSARPDPPIDLD 638
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRKE 344
+ + S + W G + PIT + + W W N+S Y G
Sbjct: 639 LSDPAARSVRLTWIPGKDHRSPITEFLVQFEEDRWEPGRWQNLSS---------YPGDLN 689
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ I L P+ Y+F+VIA N +G +PS PSP+Y T P P + G G + ++
Sbjct: 690 SVILQ-LAPFVNYQFRVIAINSVGQSDPSRPSPRYKTTGAAPDAIPKGLRGWGSRKDNME 748
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYE 462
I+WEPL ++N PN++Y ++WR+K+ E E+ NV + + + Y YE
Sbjct: 749 ITWEPLLDLERNGPNLHYIVWWRRKDVEE-------EWNNVTTLGAKHVVHNTEIYVPYE 801
Query: 463 VKVQAINDVGPGPESEVV 480
+K+QA N+ G GPES +V
Sbjct: 802 IKIQARNEFGAGPESNMV 819
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 118/295 (40%), Gaps = 26/295 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P T+SW RNG+ N P + + L I + + P
Sbjct: 54 VDPRDNIIIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRK---RSGTLEIGFRSGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E YQC A N S+ L ++ P + K LE + EG + + CNP
Sbjct: 111 EDYEGEYQCFATNDFGVSLSNKILLRVSKAPLWPKEVLEPVSVI-EGSPLVLPCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA----------TNV 164
P F + D N+ I R + NG+L S V ++D + YSC A N
Sbjct: 170 PPPFTFWMDSNMSPIPQDKRVSMGLNGDLYFSNVLAQDANTDYSCKARFLFTHTIQEKNP 229
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+ + R + P++ + + R+ QL L W G G
Sbjct: 230 YKLKVQTNRKVAESTPTFLSPSGSESSKMVLRDEQLLLECIAAGLPTPIIKWFKKG---G 286
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +++ N N L+I + S DAGEY C+ + +G I V V+ P
Sbjct: 287 ELPGQKVKFENFN---KTLKIVSVSEEDAGEYVCMANNHLGTIRHSIFVQVKAAP 338
>gi|410908413|ref|XP_003967685.1| PREDICTED: neuronal cell adhesion molecule-like [Takifugu rubripes]
Length = 1288
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 210/475 (44%), Gaps = 33/475 (6%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
TC A G P + SW NG ++ E P + + ++D+ + + A+YQC
Sbjct: 365 TCRASGTPKPSISWAMNG--ISIENAPADPSRK--VEDDTIIFADVQ-SGSSAVYQCNVS 419
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+A + VL+ P P + I C +P P+ W K+
Sbjct: 420 NDYGYLLSNAFVNVLSEPPRVLT-PANKVYQVIKNQRALIDCASFGSPVPQITWFKESRS 478
Query: 130 IGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ I NG L + +SG Y+C A N G+ E+ L V P+ + P
Sbjct: 479 STMDSQAYITHTNGTLEMRTAQAHNSGKYTCVARNSLGIYENHVYLQVKE-PTRILKQPE 537
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ R++ C + L W + G + +E + ++ L IT+
Sbjct: 538 YKVVQRGRSVVFECKVKHDPTLTPTITWLKDD---GELPDDE----RLILESDSLTITDV 590
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
S +DAG Y CV +T+ + S + V P P +++ + K S + WT G + P
Sbjct: 591 SESDAGVYTCVTNTTLDQDSASAELTVVERPDPPTDLELTDKKKRSVQLTWTPGDEHNSP 650
Query: 309 ITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I + + + + W N++E V G + + L P+ Y F+V+A N+
Sbjct: 651 IQKFLVQYEDSLHHHGHWHNLTE-VPGTKTTTHLK---------LSPYVHYTFRVLALND 700
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G+ PS PS T A P Q P+ + G G + +L ISW+PL + N P ++Y++ W
Sbjct: 701 VGFSRPSFPSRMLKTEAAAPDQNPAGVQGFGTEHDNLVISWKPLSGLQANGPGLHYRVMW 760
Query: 427 RKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
R+K+ D+E+ S T+ N V P+ + YE+KVQA+ND G GPE V
Sbjct: 761 RQKDLDSEWTSVTVA--NNSKFVVSGTPT---FAPYELKVQAVNDYGAGPEPAVA 810
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 124/311 (39%), Gaps = 42/311 (13%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + D+ CEA G P ++SW RNG + + P R V+ I + E+
Sbjct: 44 IDPREDIIIHCEAKGKPHPSFSWTRNGTHFDIDDDPNVTM-RPHSGTLVVDISRVKAEQY 102
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
+YQC A+N+ T S+ + + P + K ++ EG ++ + C P A P
Sbjct: 103 ECVYQCTARNKHGTAVSNNIVVRQSRSPLWSKERIKP-LVVQEGVSLVLPCRPPAGLPPP 161
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA---------------T 162
++ D N + R NG+L S V R+DS Y C A
Sbjct: 162 VIFWMDNNFQRLPQSSRVSQSLNGDLYFSNVLREDSRNDYICYARFPYTQTIQQKQPITV 221
Query: 163 NVHGMDESKGRLIVLHG--------------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 208
V MD + L+ P++ P +T+ + L++ C A E
Sbjct: 222 KVLTMDAINDTMAALYNDTDLFSEAPAEERKPAFLIPSRPSMTVLRGQVLEMECIA--EG 279
Query: 209 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268
L WT + DL T ++ L I + S +DAGEY CV ++ +G +
Sbjct: 280 LPTPEISWTK-----VSGDLPAKRTSFLHYQ-KTLRIVDVSESDAGEYCCVARNQLGSVQ 333
Query: 269 TKTTVIVEGPP 279
V+V+ P
Sbjct: 334 QTIHVMVKAAP 344
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 10/208 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G + + C E P P+ W K + + + L I VS D+G Y C A N
Sbjct: 268 GQVLEMECIAEGLPTPEISWTKVSGDLPAKRTSFLHYQKTLRIVDVSESDAGEYCCVARN 327
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + ++V P + + +A + L C A ++ W NG+ I
Sbjct: 328 QLGSVQQTIHVMVKAAPYWISGPSKNLVLAPGESGVLTCRASGTPKPSIS--WAMNGISI 385
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPPGL 281
N + P+ ++ + + + Y+C V + G + + V+ E P L
Sbjct: 386 ENAPAD----PSRKVEDDTIIFADVQSGSSAVYQCNVSNDYGYLLSNAFVNVLSEPPRVL 441
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPI 309
+V +V K + D A+ G P+
Sbjct: 442 TPANKVYQVIKNQRAL--IDCASFGSPV 467
>gi|71998006|ref|NP_001023496.1| Protein LAD-2, isoform a [Caenorhabditis elegans]
gi|18140037|gb|AAL60232.1|AF456361_1 immunoglobulin domain-containing protein Y54G2A.25 [Caenorhabditis
elegans]
gi|148283960|gb|ABQ57413.1| LAD-2 long isoform [Caenorhabditis elegans]
gi|351051345|emb|CCD83513.1| Protein LAD-2, isoform a [Caenorhabditis elegans]
Length = 1187
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 209/476 (43%), Gaps = 34/476 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPERDPAMYQCRA 68
C A G P +W NG+ L+ L + R + D+ +L +R LN + D +YQC A
Sbjct: 351 CLAGGQPTPIITWSMNGKFLHE----LAEDSRRVLLDHGRILRVRNLNHDLDTGVYQCNA 406
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW--KKD 126
N L +++A + V P F+ P V + C+ +AAP+ W D
Sbjct: 407 SNPLGYVFANAFVHVRAHAPFFRM-PAARHWKVVLHSTVVLDCDVDAAPEAMVRWVDADD 465
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ G+ K+F N ++ V+ D G+Y C +N +G++ + RL V P+Y+ ++
Sbjct: 466 RPLQVVEGKNKLFPNHTFMVYDVNSADEGLYYCNVSNKYGINRATNRLQVF-KPTYFVRI 524
Query: 187 P--PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P ++ + A ++ C A + L + Y WT NG + E+ I L
Sbjct: 525 PTPKRLILEAGETAEVFCEAVADPRLPIRYQWTINGKVLT-------ESQYYEILPDRLR 577
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
+ +G +C + V +IV+ P P V+ + AT++W +
Sbjct: 578 FRSVRGRHSGIIDCAAITDVDVKLASMQLIVKDVPAHPV-VETAHCSERKATVKWVAASD 636
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
+G I Y + T++ + V I +EV+ ++ ++ L PW Y F+V+A
Sbjct: 637 HGDSIKKYIVEMFTDFKKNEWEV----INEEVN--VNKETFEVDITLTPWVNYTFRVVAV 690
Query: 365 NELGY------GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
N G G+P T PY P+ + G G + +L ISW+PL R NAP
Sbjct: 691 NSHGRSDMKIDGQPKEDWLTCQTRPSFPYTNPTGVKGEGTEPDNLVISWKPLDRYYWNAP 750
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N+ Y + ++ +E L E ++R F +Y ++VQ++N VGP
Sbjct: 751 NMQYLVRYKLDEPIHGWTEFLVEDSLANFTIIRDQPTF--RKYLIQVQSVNSVGPS 804
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY----LNPERDPAMYQCRAKN 70
G PD W L+ ++ + R+ DN + + L+ + +Y+C A +
Sbjct: 153 GTPDPKIVWLYRS--LDDSSVIETIRSRHITVDNEGHLHFSSVELSDGKATLVYECAATS 210
Query: 71 Q-LKTRYSSAQLRVLTLKPSF-KKRPLE------SETYAGEGGNVTIFCNPEAAPKPKFV 122
L+ Y S L ++PS K P++ SE GG + + C P P
Sbjct: 211 PVLRGEYRSGDRIQLDIEPSQDKSHPVKKMSVSPSEVTVRAGGQLKLQCIFGGRPLPTIF 270
Query: 123 WKK-DGNIIGSGGRRKIFENGN----LLISPVSRDDSGIYSCTATN-VHGMDESKGRLIV 176
W K DG + S + + L++ V DD+G Y C + VH ++ + V
Sbjct: 271 WSKIDGELPKSRIKDLTSHESDFGRSLIVENVHPDDAGAYECRGRHLVHTVN-----VRV 325
Query: 177 LHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL--ET 233
+ P ++E PP+ I++ +L C A + + W+ NG L+EL ++
Sbjct: 326 MAAP-FWEFDPPRDISLPEESTGELECLAGGQPTPIIT--WSMNG-----KFLHELAEDS 377
Query: 234 PNINIDGG-LLEITNASF-ADAGEYECVVKSTVGKISTKTTVIVEG 277
+ +D G +L + N + D G Y+C + +G + V V
Sbjct: 378 RRVLLDHGRILRVRNLNHDLDTGVYQCNASNPLGYVFANAFVHVRA 423
>gi|291402555|ref|XP_002717616.1| PREDICTED: neurofascin isoform 1 [Oryctolagus cuniculus]
Length = 1174
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 205/486 (42%), Gaps = 48/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 414
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 415 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 473
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG + ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 474 RWFKNGQ--GSNLDGGNYHVHENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 530
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + I N E ++
Sbjct: 531 DPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDEEPLYISNRMKKEDDS--- 587
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I + D G Y CV + + + K + V G P P +++ ++ + S
Sbjct: 588 ------LTIFGVAEKDQGSYTCVASTELDQDLAKAYLTVMGRPDRPRDLELTDLAERSVR 641
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W G N PIT Y + + F + + ++ G +++ L P+
Sbjct: 642 LTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGNVNSAVLQ-LSPYVN 693
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 694 YQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAF 753
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + WR++ ET + N + R + Y YE++VQA ND G
Sbjct: 754 GPNLRYIVKWRRR-------ETRDAWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKA 806
Query: 475 PESEVV 480
PE E V
Sbjct: 807 PEPETV 812
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVILQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 106/284 (37%), Gaps = 36/284 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLVLAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + L+ N
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG------QGSNLDGGN 488
Query: 236 INI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
++ + G LEI D G Y CV + +GK + + V+ P
Sbjct: 489 YHVHENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLVLAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|326911404|ref|XP_003202049.1| PREDICTED: neuronal cell adhesion molecule-like [Meleagris gallopavo]
Length = 1326
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 212/492 (43%), Gaps = 48/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C A G P + SW NG + + ED R D + I ER A+YQ
Sbjct: 593 DGTLICRANGNPKPSISWLTNGVPI---AIAPEDPSRRVDGDTI--IFSAVQERSSAVYQ 647
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL P P G I C +PKP+ W K
Sbjct: 648 CNASNEYGYLLANAFVNVLAEPPRILT-PANKLYQVIAGSPALIDCAYFGSPKPEIEWFK 706
Query: 126 --DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G+I+ G +NG L I +D +G Y+C A N G +++ +L V P+
Sbjct: 707 GVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMI 764
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL- 242
+ P I + C + L IW D NEL + G
Sbjct: 765 IKQPEYKVIQRSAQVSFECVIKHDPTLIPTVIWLK--------DNNELPDDERFLVGKEN 816
Query: 243 LEITNASFADAGEYECVVKSTVGKISTK----------TTVIVEGPPGLPGGVQVVEVHK 292
L I N + D G Y C+V +T+ +S T I+ P P +++ +
Sbjct: 817 LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLE 876
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENV 350
S + W G N PIT++ I + W +E V G + +++
Sbjct: 877 RSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGSQ---------TTVQLK 926
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L P+ Y F+VIA NE+G +PS PS QY T + P + PS + G G + +L I+WE L
Sbjct: 927 LSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSEPDNLVITWESL 986
Query: 411 PREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ N P + YK+ WR+K+ D E+ S + NV +V F YE+KVQA+N
Sbjct: 987 KGFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGTPTF--VPYEIKVQALN 1041
Query: 470 DVGPGPE-SEVV 480
D+G PE SEV+
Sbjct: 1042 DLGYAPEPSEVI 1053
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 119/314 (37%), Gaps = 45/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + + Q L + +N +
Sbjct: 274 VDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDK---DAQVTMKPNSGTLVVNIMNGVKA 330
Query: 61 PA---MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
A +YQC A+N+ S+ + + P + K LE + EG ++ + C P
Sbjct: 331 EAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-NHVREGDSLVLNCRPPVGL 389
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTA------------- 161
P ++ D ++ + NG+L S V +D+ Y C A
Sbjct: 390 PPPIIFWMDNAFQRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTIQQKQP 449
Query: 162 --TNVHGMDESKGRLIV------LHGPSYYEQLPPKI---TIAAHRNLQLRCSAHTEELL 210
V MD + ++G + PP + T + ++LR + E +
Sbjct: 450 ISVKVFSMDSLNDTIAANLSDTDIYGAKPVTERPPVLLTPTGSTSNKVELRGNVLLLECI 509
Query: 211 DVAYI-----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
W G G + N N L+I + S AD+G Y+C+ ++ +G
Sbjct: 510 AAGLPTPVIRWIKEG---GELPANRTFFENFK---KTLKIIDVSEADSGNYKCIARNILG 563
Query: 266 KISTKTTVIVEGPP 279
+V V+ P
Sbjct: 564 STHHVISVTVKASP 577
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 12/178 (6%)
Query: 105 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
GNV + C P P W K+G + + R FEN L I VS DSG Y C A
Sbjct: 501 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCIA 558
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N+ G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 559 RNILGSTHHVISVTVKASP-YWITAPRNLVLSPGEDGTLICRANGNPKPSIS--WLTNGV 615
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I E P+ +DG + + + Y+C + G + V V P
Sbjct: 616 PIAIAP----EDPSRRVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 669
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 91/241 (37%), Gaps = 38/241 (15%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG VQV ++ T A + W G G + ++K+ + + S+ + K
Sbjct: 1065 PGNVQVHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSLSRR-------SKRHVEK 1117
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S+Y+ V N G G P+SP + TP P +PS +
Sbjct: 1118 KILTFRGNKTFGMLPGLEPFSSYKLNVRVVNGKGEG-PASPDKMFKTPEGVP-SSPSFLK 1175
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ L++ W P Y F N E + +RIP+
Sbjct: 1176 ITNPTLDSLTLEWGS-PTHPNGVLTSYILKFQPINNTHELGP----------LVEIRIPA 1224
Query: 455 E---------FYYTEYEVKVQAINDVGPGPE--SEVVTIWHDPLVIISYVCQGDLKLCLP 503
Y T Y+ A VG G + E VTI + ++ V G ++ P
Sbjct: 1225 NESSLILKNLNYSTRYKFYFNAQTSVGSGSQITEEAVTIMDEAGILRPAVGAGKVQPLYP 1284
Query: 504 R 504
R
Sbjct: 1285 R 1285
>gi|291402557|ref|XP_002717617.1| PREDICTED: neurofascin isoform 2 [Oryctolagus cuniculus]
Length = 1157
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 203/485 (41%), Gaps = 46/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 347 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 398
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 399 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 457
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG + ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 458 WFKNGQ--GSNLDGGNYHVHENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 514
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + I N E ++
Sbjct: 515 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDEEPLYISNRMKKEDDS---- 570
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L I + D G Y CV + + + K + V G P P +++ ++ + S +
Sbjct: 571 -----LTIFGVAEKDQGSYTCVASTELDQDLAKAYLTVMGRPDRPRDLELTDLAERSVRL 625
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G N PIT Y + + F + + ++ G +++ L P+ Y
Sbjct: 626 TWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGNVNSAVLQ-LSPYVNY 677
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W P+
Sbjct: 678 QFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFG 737
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGP 475
PN+ Y + WR++ ET + N + R + Y YE++VQA ND G P
Sbjct: 738 PNLRYIVKWRRR-------ETRDAWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKAP 790
Query: 476 ESEVV 480
E E V
Sbjct: 791 EPETV 795
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVILQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 223 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 278
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 279 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 331
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 106/284 (37%), Gaps = 36/284 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 257 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 310 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLVLAPGEDGR--LVCRANGNPKPTVQWMV 366
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 367 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + L+ N
Sbjct: 421 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG------QGSNLDGGN 471
Query: 236 INI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
++ + G LEI D G Y CV + +GK + + V+ P
Sbjct: 472 YHVHENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 205 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 265 SGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 322
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 323 ISVRVKAAP-YWLDEPKNLVLAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 377
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 378 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 426
>gi|354478083|ref|XP_003501245.1| PREDICTED: neurofascin isoform 3 [Cricetulus griseus]
Length = 1240
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 213/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P + +QL C + L + W + + IGN E ++
Sbjct: 525 YRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y I + F + + ++ G ++
Sbjct: 636 LTDLAERSVRLTWIPGDDNNSPITDYVI----QFEEDQFQPG---VWHDHSKFPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 689 VLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE + +
Sbjct: 801 VQAENDFGKGPEPDTI 816
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVSERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKTKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVSERTPSFMYPQGTSSSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|301765662|ref|XP_002918248.1| PREDICTED: neurofascin-like isoform 2 [Ailuropoda melanoleuca]
Length = 1189
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 210/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 369 CRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSR--------AVYQCN 420
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 421 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 479
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 480 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIF 536
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 537 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMKKEDDS--------- 587
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y C+ + + + K + V +G P P +++
Sbjct: 588 LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLEL 647
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 648 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 700
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W
Sbjct: 701 LQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITW 759
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + S Y YE++V
Sbjct: 760 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGSTPVYVPYEIRV 812
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 813 QAENDFGKGPEPDTV 827
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S R E ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 122/317 (38%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EDYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D+ YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNA 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 93/248 (37%), Gaps = 35/248 (14%)
Query: 46 QDNVLTIRYL--NPERD------PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLE 96
Q N T++ L NP D P MY R V PSF +
Sbjct: 219 QKNAFTLKVLTNNPYNDSSLRNHPDMYSARG--------------VAERTPSFMYPQGTA 264
Query: 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDS 154
S G ++ + C P P W K G + S + FEN N L I+ VS +DS
Sbjct: 265 SSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDS 322
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A+N G + V P Y+ P + +A + +L C A+ V
Sbjct: 323 GEYFCLASNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ- 380
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV- 273
W NG + + N PN + G + + + Y+C + G + V
Sbjct: 381 -WMVNGEPLQSAPRN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVS 435
Query: 274 IVEGPPGL 281
+++ PP +
Sbjct: 436 VLDVPPRM 443
>gi|301765660|ref|XP_002918247.1| PREDICTED: neurofascin-like isoform 1 [Ailuropoda melanoleuca]
Length = 1237
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 210/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSR--------AVYQCN 409
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 410 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 468
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIF 525
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 526 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMKKEDDS--------- 576
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y C+ + + + K + V +G P P +++
Sbjct: 577 LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 637 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 689
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W
Sbjct: 690 LQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITW 748
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + S Y YE++V
Sbjct: 749 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGSTPVYVPYEIRV 801
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 802 QAENDFGKGPEPDTV 816
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 121/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EDYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D+ YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNA 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S R E ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + ++ L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPRN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|281341481|gb|EFB17065.1| hypothetical protein PANDA_006672 [Ailuropoda melanoleuca]
Length = 1344
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 210/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSR--------AVYQCN 409
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 410 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 468
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIF 525
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 526 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGNRMKKEDDS--------- 576
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y C+ + + + K + V +G P P +++
Sbjct: 577 LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 637 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 689
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W
Sbjct: 690 LQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITW 748
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + S Y YE++V
Sbjct: 749 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGSTPVYVPYEIRV 801
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 802 QAENDFGKGPEPDTV 816
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 121/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EDYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D+ YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNA 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S R E ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + ++ L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPRN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|426346933|ref|XP_004041123.1| PREDICTED: protein sidekick-2 [Gorilla gorilla gorilla]
Length = 2172
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 209/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L + L P+ D M+QC A+N
Sbjct: 330 CRAKGVPPPSITWYKDAAVVEVEKLTRFRQR----SDGGLQVSGLVPD-DTGMFQCFARN 384
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 385 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 442
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 443 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 556
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 557 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 616
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 617 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 667
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 668 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 727
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 728 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 782
Query: 481 TIW 483
T W
Sbjct: 783 TEW 785
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 423 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 479
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 480 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 536
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 537 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 596
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 597 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 646
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 647 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 706
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 707 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 755
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 756 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 815 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 874
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 875 TTPGDGPRS 883
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 136/379 (35%), Gaps = 52/379 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 92 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPQPQVTWF 148
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 149 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGG 208
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ I +A + L C A+ L+ + IW +GV L +
Sbjct: 209 PADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLS 259
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 260 GGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPER 316
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V +++ R+ R + ++ +
Sbjct: 317 HITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRSDGGLQVS 368
Query: 350 VLVPWSTYEFKVIAGNELG 368
LVP T F+ A N G
Sbjct: 369 GLVPDDTGMFQCFARNAAG 387
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 114/284 (40%), Gaps = 41/284 (14%)
Query: 219 NGVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272
G RI + N T PN+ ++ +T + E ++ G+ +
Sbjct: 926 TGYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSAS 982
Query: 273 VIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWF 325
I G PP LPG + + + S T+Q+ G I+ + + A+ W
Sbjct: 983 TISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWL 1042
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+ H + E D + + + L P++ Y F++ N +G PS PS + T
Sbjct: 1043 LI--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAP 1095
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEY 442
P AP+ + L + W PLP + N ++ YKI + R + S +++
Sbjct: 1096 PDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKMLSHVVQD- 1154
Query: 443 GNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
R+ E+ +TEY V+VQA N +G GP S+ V
Sbjct: 1155 --------RVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 1190
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYVVSVAAFNAAGD 1708
Query: 474 GPES 477
GP S
Sbjct: 1709 GPRS 1712
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASS 1460
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 78/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W AT I Y+I R N + E V+ +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPATPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1360 YTATS-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N VV F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASSFVVDRLKPF 1469
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKMLS-- 1149
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289
>gi|344291041|ref|XP_003417245.1| PREDICTED: protein sidekick-1 [Loxodonta africana]
Length = 2262
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 215/486 (44%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C A GVP + +W+++ ++ E L R+ + D L I L P+ D M+QC A+
Sbjct: 530 CRAKGVPPPSITWYKDAAVVEVERL-----SRFRLHGDGGLQISGLLPD-DTGMFQCFAR 583
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N +S L V ++ P+ + PL+S +G +V + C AP+P W+K I
Sbjct: 584 NAAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERI 641
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LL+SP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 642 LASGSVQLPRFTLLESGSLLVSPTHISDAGTYACLATNSRGVDEASADLVVW-ARTRITK 700
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + V Y+W +G + M+ N P I +D G L
Sbjct: 701 PPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA-MESN----PRIRLDKNGSLH 755
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + K + + W
Sbjct: 756 ISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVAILSTMEKRAINLTWAKP 815
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y ++ + N+ W V+ VD EA+ V LVP +Y+F+
Sbjct: 816 FDGNSPLIRY-VLEMSENNAPW-----TVLLASVD-----PEATSVMVKGLVPARSYQFR 864
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 865 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLK 924
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 925 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 979
Query: 478 EVVTIW 483
VT W
Sbjct: 980 SKVTEW 985
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 41/266 (15%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 1147 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1203
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD---RYTGRKEAS 346
+ S T+Q+ G I+ + + A+ VIG+ + Y E
Sbjct: 1204 IGPRSVTLQFRPGYDGKTSISRWLVEAQMG-----------VIGEGEEWQLVYQLHNEPD 1252
Query: 347 IENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
++ L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 1253 ARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETS 1312
Query: 403 LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 457
L + W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1313 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDSHGKTLSH-----VVHDRVEREYTIED 1364
Query: 458 ---YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1365 LEEWTEYRVQVQAFNAIGSGPWSQTV 1390
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y + AR + W ++ I KEV YT +
Sbjct: 1922 IIVRYSSAIAIHWSSGDPGKGPITRYVLEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1978
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1979 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 2012
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 136/382 (35%), Gaps = 58/382 (15%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N N E + RY I T Y+C
Sbjct: 244 LVLTCMAEGSWPLEFKWLHN----NRELTKFSLEYRYMITSLDRT--------HAGFYRC 291
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKF 121
+N+ L R + Q+ + +KR + S G + P A P+P+
Sbjct: 292 IVRNRMGALLQRQTEVQVAYMGNFEEGEKRQIVSH------GEAAVIRAPRIASFPQPQV 345
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH--- 178
W +DG I R I L+I D+G Y A N D + + L
Sbjct: 346 TWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPVTLAVEN 405
Query: 179 --GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
GP+ I + + L C A+ L+ + IW +GV
Sbjct: 406 VGGPADPIAPTIIIPPKNTSVVVGTSEVTLECVANARPLIKLHIIWKKDGV--------- 456
Query: 231 LETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L + ++ L I N + +DAG YEC + S+V + + V PP V+
Sbjct: 457 LLSGGVSDHNRRLTIPNPTSSDAGYYECEAVLRSSSVPAVVRGAYLSVLEPPQF---VKE 513
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
E H T+ + D + + I TW+ + V + + R+ + +
Sbjct: 514 PERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAVVEVERLSRFRLHGDGGL 565
Query: 348 E-NVLVPWSTYEFKVIAGNELG 368
+ + L+P T F+ A N G
Sbjct: 566 QISGLLPDDTGMFQCFARNAAG 587
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 85/224 (37%), Gaps = 47/224 (20%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y + R + W +VS +
Sbjct: 1602 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQMRELPSGRWALHSASVSHNASS 1660
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ I
Sbjct: 1661 FMVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTII 1708
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKI-------------FWRKKN-------DTE 433
+ I W+ L R+ Q P + FW + T
Sbjct: 1709 SVTPHTTTSVLIRWQMLMRQVQAEPETPFLTSSQGMLKLLALIYFWEAQRWNLTERVKTL 1768
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
F +ET V++ + YT Y V V A N G GP S
Sbjct: 1769 FLAET----------SVKLKNLTGYTAYMVSVAAFNAAGDGPRS 1802
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSE 329
++ PP + P V + +TS ++W + NG P + YKI + + + +
Sbjct: 1292 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKI--KYSRSDSHGKTLS 1349
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1350 HVVHDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSSG 1402
Query: 390 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 449
P+ + + + W +P +N + YK+ +++K+ L E GN +
Sbjct: 1403 PTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVVYKEKDSDAHPRFWLVE-GNASRS- 1460
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1461 AQLTGLGKYVLYEVQVLAFTRIGDGSRSH 1489
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W I Y+I R N +T + V+ +
Sbjct: 1501 PGPPVGILFPEVRTTSVRLIWQPPTAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1559
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P + Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1560 YTATG-------LKPEAVYLFRITAQTRKGWGEAAEALVVTTERRDRP-QPPSKPVVQQE 1611
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY + R+ + + N +V F
Sbjct: 1612 DVKARSVLLSWE--PGSDGLSPVRYYTVQMRELPSGRWALHSASVSHNASSFMVDRLKPF 1669
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1670 --TSYKFRVKATNDIG 1683
>gi|354478079|ref|XP_003501243.1| PREDICTED: neurofascin isoform 1 [Cricetulus griseus]
Length = 1189
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 214/501 (42%), Gaps = 63/501 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 414
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 415 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 473
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 474 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 530
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P + +QL C + L + W + + IGN E ++
Sbjct: 531 DPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 587
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGL 281
L I + D G Y C+ + + + K + V +G P
Sbjct: 588 ------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDR 641
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
P +++ ++ + S + W G N PIT Y I + F + + ++ G
Sbjct: 642 PRDLELTDLAERSVRLTWIPGDDNNSPITDYVI----QFEEDQFQPG---VWHDHSKFPG 694
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G +
Sbjct: 695 SVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKN 753
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYT 459
++ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 754 NMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYV 806
Query: 460 EYEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE + +
Sbjct: 807 PYEIRVQAENDFGKGPEPDTI 827
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSARGVSERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKTKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKTKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|345804803|ref|XP_540402.3| PREDICTED: protein sidekick-2 [Canis lupus familiaris]
Length = 2180
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 215/486 (44%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C A GVP + +W+++ ++ E L +R+ + D L I L P+ D M+QC A+
Sbjct: 338 CRAKGVPPPSITWYKDAAVVEVERL-----NRFRQRGDGGLQISGLVPD-DTGMFQCFAR 391
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N +S L V ++ P+ + PL+S +G +V + C AP+P W+K I
Sbjct: 392 NAAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERI 449
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 450 LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITK 508
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + V Y+W +G +G M+ N P I +D G L
Sbjct: 509 PPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGTALG-MESN----PRIRLDKNGSLH 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + + + W
Sbjct: 564 ISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTTERRAINLTWAKP 623
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y + N N+ W V+ VD EA+ V LVP +Y+F+
Sbjct: 624 FDGNSPLLRYLLEMSEN-NAPW-----TVLLASVD-----PEATSVMVKGLVPARSYQFR 672
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 673 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLK 732
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 733 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 787
Query: 478 EVVTIW 483
VT W
Sbjct: 788 SKVTEW 793
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 180/487 (36%), Gaps = 46/487 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L R+ + ++ + D Y C A N
Sbjct: 431 CETSGAPRPAITWQKGERILASGSVQLP---RFTLLESGSLLISPTHISDAGTYTCLATN 487
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ ++VW+KDG
Sbjct: 488 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTVRYVWEKDGT 544
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ +NG+L IS D G Y+C + G D L V P E
Sbjct: 545 ALGMESNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHP 604
Query: 187 PPKITIAAHRNLQLRCSA----------HTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
++ R + L + + E+ + WT V + ++D E ++
Sbjct: 605 VATLSTTERRAINLTWAKPFDGNSPLLRYLLEMSENNAPWT---VLLASVDP---EATSV 658
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G L+ + F + V K K + + ++ E P P V S
Sbjct: 659 MVKG-LVPARSYQFRLCAVND-VGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIM 716
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL---- 351
IQW P +H + + + + + G V ++ +A + N+L
Sbjct: 717 IQWQPP-----PESHQNGLLKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 765
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 766 IIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNAPS 824
Query: 412 REKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 825 PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCFTT 884
Query: 471 VGPGPES 477
G GP S
Sbjct: 885 PGDGPRS 891
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 116/285 (40%), Gaps = 45/285 (15%)
Query: 220 GVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTK 270
G RI + N T PN+ ++ GL +T + E + G++S
Sbjct: 935 GYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAS 990
Query: 271 TTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NST 323
T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 991 T--ISSGVPPELPGAPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEE 1048
Query: 324 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 383
W V H + E D R E L P++ Y F++ N +G PS PS + T
Sbjct: 1049 WLLV--HQLTNEPD---ARSMEVPE--LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQ 1101
Query: 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKE 441
P AP+ + L + W PLP + N ++ YKI K + + +TL
Sbjct: 1102 APPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH 1158
Query: 442 YGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ E+ +TEY V+VQA N +G GP S+ V
Sbjct: 1159 -----VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 1198
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 9/214 (4%)
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A + T ++ + ++ P F K P E A V I C + P P W
Sbjct: 293 ECVANARASTVPTTPREAHMSQPPQFVKEP-ERHITAEMEKVVDIPCRAKGVPPPSITWY 351
Query: 125 KDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
KD ++ + + G+ L IS + DD+G++ C A N G ++ L V
Sbjct: 352 KDAAVVEVERLNRFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPN 411
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGG 241
+ P T+ ++ L C T A W G RI + ++ P ++ G
Sbjct: 412 ITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRFTLLESG 466
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
L I+ +DAG Y C+ ++ G ++V
Sbjct: 467 SLLISPTHISDAGTYTCLATNSRGVDEASADLVV 500
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P E QN
Sbjct: 1603 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLENQN 1661
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1662 GDIQGYKIYFWEAQRRNVTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1716
Query: 474 GPES 477
GP S
Sbjct: 1717 GPRS 1720
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y + R W +VS +
Sbjct: 1410 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPGGRWALHSASVSHNASA 1468
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1469 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIV 1516
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1517 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1576
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1577 SMYAVRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1619
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1840 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1896
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1897 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1930
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y++ R N ST + V+ +
Sbjct: 1309 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQVTHRLN-ASTANAATVEVLAPSARQ 1367
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1368 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1419
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY + R+ + + N VV F
Sbjct: 1420 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPGGRWALHSASVSHNASAFVVDRLKPF 1477
Query: 457 YYTEYEVKVQAINDVGPGPESE 478
T Y+ +V+A ND+G SE
Sbjct: 1478 --TSYKFRVKATNDIGDSEFSE 1497
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R + + +
Sbjct: 1100 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1157
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1158 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1209
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1210 GPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1268
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPES 477
++ Y YEV+V A +G G S
Sbjct: 1269 -AQLTGLGKYVLYEVQVLAFTRIGDGSPS 1296
>gi|119611933|gb|EAW91527.1| hCG16415, isoform CRA_d [Homo sapiens]
Length = 603
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 112 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 162
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 163 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 221
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 222 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 278
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 279 YRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 330
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 331 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 389
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + +Y G ++
Sbjct: 390 LTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSA 442
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+
Sbjct: 443 VLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 501
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 502 WTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIR 554
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 555 VQAENDFGKGPEPESV 570
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 17 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 69
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 70 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 126
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 127 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 180
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 181 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 234
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 235 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 275
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 15 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 72
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 73 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 129
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 130 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 185
Query: 281 L 281
+
Sbjct: 186 M 186
>gi|158260111|dbj|BAF82233.1| unnamed protein product [Homo sapiens]
Length = 627
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 18/290 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
G L I NA AG Y C ++ V S ++V G G + +V+
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGKNRKGGEINMVD 614
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D+ + +
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMP--- 283
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 284 ------STAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|297701681|ref|XP_002827834.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Pongo abelii]
Length = 2177
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 207/483 (42%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 354 CRAKGVPPPSITWYKDAAVVEVEKLARFRQR----SDGGLQISGLLPD-DTGMFQCFARN 408
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 409 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 466
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE L+V + +
Sbjct: 467 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEXSADLVVW-ARTRITKP 525
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 526 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 580
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 581 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 640
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 641 DGNSPLIRYVLEMSEN-NAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 691
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 692 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 751
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 752 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 806
Query: 481 TIW 483
T W
Sbjct: 807 TEW 809
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 39/283 (13%)
Query: 219 NGVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272
G RI + N T PN+ ++ +T + E ++ G+ +
Sbjct: 931 TGYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSAS 987
Query: 273 VIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWF 325
I G PP LPG + + + S T+Q+ G I+ + + A+ W
Sbjct: 988 TISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWL 1047
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+ H + E D + + + L P++ Y F++ N +G PS PS + T
Sbjct: 1048 LI--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAP 1100
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYG 443
P AP+ + L + W PLP + N ++ YKI K + ++ +TL
Sbjct: 1101 PDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-- 1155
Query: 444 NVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ E+ +TEY V+VQA N +G GP S+ V
Sbjct: 1156 ---VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 1195
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1837 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1893
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1894 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1927
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1600 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1658
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1659 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1713
Query: 474 GPES 477
GP S
Sbjct: 1714 GPRS 1717
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
PP P VQ +V S + W G+ P+ +Y I R + W S V
Sbjct: 1407 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGXWALHSASV------ 1459
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
+ + I + L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1460 --SHNASSFIVDRLKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTILSVTP 1517
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ I W+P +K N + ++I +R+ + TL+ N G + S +
Sbjct: 1518 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELTSMYS 1577
Query: 458 -------------------YTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1578 MRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1616
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 106/281 (37%), Gaps = 37/281 (13%)
Query: 105 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 151 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 210
Query: 163 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 211
N D + I L GP+ I +A + L C A+ L+
Sbjct: 211 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIK 270
Query: 212 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 268
+ IW +GV L + I+ L I N + ++AG YEC + S+V +
Sbjct: 271 LHIIWKKDGV---------LLSGGISDHNRRLTIPNPTGSNAGYYECEAVLRSSSVPSVV 321
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 328
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 322 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDA 370
Query: 329 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 368
V +++ R+ R + ++ + L+P T F+ A N G
Sbjct: 371 AVVEVEKLARFRQRSDGGLQISGLLPDDTGMFQCFARNAAG 411
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1306 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1364
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1365 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1416
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1417 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGXWALHSASVSHNASSFIVDRLKPF 1474
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1475 --TSYKFRVKATNDIG 1488
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1097 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1154
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1155 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1206
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D + Q GN +
Sbjct: 1207 GPANVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DLDTQPRFWLVEGNSSRS 1265
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1266 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1294
>gi|426333438|ref|XP_004028284.1| PREDICTED: neurofascin isoform 1 [Gorilla gorilla gorilla]
Length = 1341
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 211/501 (42%), Gaps = 63/501 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 455 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 505
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 506 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 564
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 565 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 621
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 622 DPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 678
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGL 281
L I + D G Y CV + + + K + V +G P
Sbjct: 679 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDR 732
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
P +++ ++ + S + W G N PIT Y + + F + + +Y G
Sbjct: 733 PRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPG 785
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G +
Sbjct: 786 SVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 844
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYT 459
++ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 845 NMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYV 897
Query: 460 EYEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE E V
Sbjct: 898 PYEIRVQAENDFGKGPEPESV 918
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 155 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 211
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 212 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 270
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 271 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 330
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 331 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 386
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 387 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 439
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 365 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 417
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 418 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 474
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 475 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 528
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 529 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 582
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 583 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 623
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 313 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 372
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 373 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 430
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 431 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 485
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 486 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 534
>gi|387539242|gb|AFJ70248.1| neurofascin isoform 1 precursor [Macaca mulatta]
Length = 1238
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 208/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 409
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 410 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 468
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 525
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 526 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 576
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 577 LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + +Y G +++
Sbjct: 637 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAV 689
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W
Sbjct: 690 LR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITW 748
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 749 TPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRV 801
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE E V
Sbjct: 802 QAENDFGKGPEPESV 816
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|348578149|ref|XP_003474846.1| PREDICTED: neurofascin isoform 1 [Cavia porcellus]
Length = 1190
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 210/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 370 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 421
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 422 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 480
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 481 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIF 537
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P + +QL C + L + W + + IGN E ++
Sbjct: 538 RMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGNRMKKEDDS--------- 588
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 589 LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLADQATPTNRLAALPKGRPDRPRDLEL 648
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 649 TDLAERSVRLTWIPGDDNNSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 701
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 702 LQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 760
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 761 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRV 813
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 814 QAENDFGKGPEPDTV 828
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 48 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 105 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 163
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 164 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 223
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 224 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 280
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 281 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 332
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 333 KMGSIRHTISVRVKAAP 349
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 275 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 327
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 328 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 384
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 385 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 438
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 439 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 492
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 493 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 533
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 281 L 281
+
Sbjct: 444 M 444
>gi|148707723|gb|EDL39670.1| neurofascin, isoform CRA_b [Mus musculus]
Length = 972
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 217/504 (43%), Gaps = 69/504 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 420 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 470
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
A+YQC N+ ++A + VL + P S + + + Y + C +P
Sbjct: 471 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPI 526
Query: 119 PKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL
Sbjct: 527 PTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 584
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELET 233
V P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 585 V-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS 643
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGP 278
L I + D G Y C+ + + + K + V +G
Sbjct: 644 ---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGR 694
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
P P +++ ++ + S + W G N PIT Y + + F + + R
Sbjct: 695 PDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSR 747
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G
Sbjct: 748 FPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 806
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEF 456
+ ++ I+W P+ PN+ Y + WR++ ET + + NV + R +
Sbjct: 807 RKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTP 859
Query: 457 YYTEYEVKVQAINDVGPGPESEVV 480
Y YE++VQA ND G GPE + +
Sbjct: 860 VYVPYEIRVQAENDFGKGPEPDTI 883
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 120 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 176
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 177 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 235
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 236 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 295
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 296 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 351
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ N+ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 352 -GDLPSNKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 404
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ NV E D Y
Sbjct: 330 DLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNV-------SEEDSGEYF 382
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 383 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 439
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 440 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 493
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 494 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 547
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 548 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 588
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 278 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 337
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 338 SGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 395
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 396 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 450
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 451 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 499
>gi|410952026|ref|XP_003982690.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Felis catus]
Length = 1184
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 207/486 (42%), Gaps = 47/486 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D + C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGSLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 480
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 481 EWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-K 537
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NIN 237
P+ + P + + C + L + W D EL +
Sbjct: 538 DPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------DNGELPSDGRFT 589
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
+D LE+ + +D G Y CV +T+ +S + V P P +++ + S +
Sbjct: 590 VDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVDVPNPPFDLELTDQLDKSVQL 649
Query: 298 QWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
WT G N PIT + I + W + +E + + + L P+
Sbjct: 650 SWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQTTAQLKLSPYV 699
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y F+V+A N LG PS PS QY T A +P P+ + G G + +L I+W+PL +
Sbjct: 700 NYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFES 759
Query: 416 NAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG
Sbjct: 760 NGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFA 814
Query: 475 PESEVV 480
PE VV
Sbjct: 815 PEPAVV 820
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 19/264 (7%)
Query: 26 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS--AQLRV 83
NG+L S LP + ++ Y + + ++ P + + ++L ++ +
Sbjct: 193 NGDLYFSNVLPEDTREDYICYARFNHTQTIQ-QKQPISVKVISVDELNDTIAANLSDTEF 251
Query: 84 LTLKPSFKKRPL----ESETYAGE---GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGR 135
+ KP+ ++ P E T E G +++ C E P P W K+DG + +
Sbjct: 252 YSAKPNRERPPTFLTPEGNTSNKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPTNRTF 311
Query: 136 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 195
+ F+ L I VS DSG Y C A N G + V P Y+ P + ++
Sbjct: 312 YRNFKK-TLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAP-YWILAPQNLVLSPG 369
Query: 196 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 255
+ L C A+ ++ W NGV I + P+ IDG + +N +
Sbjct: 370 EDGSLICRANGNPKPRIS--WLSNGVPIEIAP----DDPSRKIDGDTIIFSNVQERSSAV 423
Query: 256 YECVVKSTVGKISTKTTVIVEGPP 279
Y+C + G + V V P
Sbjct: 424 YQCNASNEYGYLLANAFVNVLAEP 447
>gi|297662214|ref|XP_002809609.1| PREDICTED: neurofascin [Pongo abelii]
Length = 1342
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 460 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 510
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 511 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 569
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 570 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 626
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 627 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 678
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 679 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 737
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + +Y G ++
Sbjct: 738 LTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSA 790
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+
Sbjct: 791 VLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 849
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 850 WTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIR 902
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 903 VQAENDFGKGPEPESV 918
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 155 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 211
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 212 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 270
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 271 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 330
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 331 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 386
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 387 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 439
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 365 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 417
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 418 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 474
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 475 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 528
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 529 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 582
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 583 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 623
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 313 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 372
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 373 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 430
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 431 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 485
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 486 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 534
>gi|332811712|ref|XP_003308755.1| PREDICTED: neurofascin isoform 1 [Pan troglodytes]
Length = 1341
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 211/501 (42%), Gaps = 63/501 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 455 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 505
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 506 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 564
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 565 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 621
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 622 DPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 678
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGL 281
L I + D G Y CV + + + K + V +G P
Sbjct: 679 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDR 732
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
P +++ ++ + S + W G N PIT Y + + F + + +Y G
Sbjct: 733 PRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPG 785
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G +
Sbjct: 786 SVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 844
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYT 459
++ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 845 NMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYV 897
Query: 460 EYEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE E V
Sbjct: 898 PYEIRVQAENDFGKGPEPESV 918
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 155 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 211
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 212 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 270
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 271 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 330
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 331 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 386
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 387 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 439
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 365 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 417
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 418 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 474
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 475 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 528
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 529 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 582
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 583 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 623
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 313 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 372
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 373 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 430
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 431 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 485
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 486 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 534
>gi|327271271|ref|XP_003220411.1| PREDICTED: neurofascin-like [Anolis carolinensis]
Length = 1164
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 210/483 (43%), Gaps = 50/483 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P + W NGE + S + R D ++ R + A+YQC A N
Sbjct: 353 CQANGNPKPSIQWLVNGEPIESSA---PNPSREVTGDTIM-FRDIQ-SGSSAVYQCNASN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ ++A + VL + P P + C +P P W K+G
Sbjct: 408 EHGYLLANAFVSVLDVIPRILA-PRNQLIKVILNNRTLLNCPFFGSPIPTLRWFKNGQ-- 464
Query: 131 GS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
GS GG K ENG L I ++D G Y+C ATN+ G +++ RL + P+ P
Sbjct: 465 GSTLHGGNYKAHENGTLEIIRARKEDQGTYTCVATNLLGKAQNQVRLEI-KDPTRIIDGP 523
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN------GVRIGNMDLNELETPNINIDGG 241
+ L C + L + W + G RI D DG
Sbjct: 524 KDAVPKKGSTVYLVCRTIHDPTLRLTVSWLKDDVPLYLGTRIKKED-----------DG- 571
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I S D G Y CV + + K + + + + P P +++ ++ + S + W
Sbjct: 572 -LTIYGVSEKDQGYYTCVASTELDKDTARAHLTILARPDRPRDLELTDLSERSVRLTWIP 630
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT Y + + W N S RY G +++ L P+ Y+F
Sbjct: 631 GDDNNSPITDYIVEFEEDRYEPGRWQNHS---------RYPGSVNSAVLR-LAPYVNYQF 680
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+VIA NE+G PS PS +Y+T +P P+ + G G ++ ISW PL + PN
Sbjct: 681 RVIAVNEVGSSYPSLPSERYHTNGARPEYNPTGVQGAGTAKNNMVISWTPLSATQVYGPN 740
Query: 420 IYYKIFWRKKNDTE-FQSETLKEYGNVG-IAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ Y + WR+++ E + + T+K G+V V + P YT YE+KVQA+ND G PE+
Sbjct: 741 LRYIVKWRRRDTRESWSNRTVK--GDVSQYTVTQTP---IYTPYEIKVQAVNDYGMAPEA 795
Query: 478 EVV 480
+ V
Sbjct: 796 DTV 798
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 105/287 (36%), Gaps = 42/287 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W + G L + LE+ D+ NV E D Y
Sbjct: 258 DLLLECIASGVPTPGIMWHKKGGDLPAGRTKLENFDKALHIANV-------SEEDSGEYF 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ T + ++ P + P GE G + C PKP W
Sbjct: 311 CLASNKVGTSRHVISV-IVKAAPFWLDEPQNLILAPGEDGR--LVCQANGNPKPSIQWLV 367
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G I S E ++ + S +Y C A+N HG + + VL
Sbjct: 368 NGEPIESSAPNPSREVTGDTIMFRDIQSGSSAVYQCNASNEHGYLLANAFVSVL------ 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNG----VRIGNMDLNEL 231
+ +P I A RN ++ + LL+ + W NG + GN +E
Sbjct: 422 DVIP---RILAPRNQLIKVILNNRTLLNCPFFGSPIPTLRWFKNGQGSTLHGGNYKAHE- 477
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A D G Y CV + +GK + + ++ P
Sbjct: 478 --------NGTLEIIRARKEDQGTYTCVATNLLGKAQNQVRLEIKDP 516
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 119/314 (37%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P T+SW RNG+ N P + L + + + P
Sbjct: 31 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPRVSMRHW---SGTLAVDFRSGGRP 87
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E YQC A+N T S+ ++ P + K L+ + EG + + CNP
Sbjct: 88 EDYEGEYQCFARNDFGTAISNKIFLQVSKSPLWPKENLDIQE-VHEGAQLILACNPPPGL 146
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P ++ ++ I R NG+L S V ++DS YSC A
Sbjct: 147 PPPAIFWMSSSMEPIHQDKRVSQGHNGDLYFSNVLQEDSQTDYSCNARFAFTHTIQQKNP 206
Query: 162 -----TNVHGMDES---------KGRLIVLHGPSYYEQL--PPKITIAAHRNLQLRCSAH 205
H ++E+ R I PS+ + P + +L L C A
Sbjct: 207 YTLKVLTKHPLNETSFRNHTDIYSARGITERHPSFMYPVGSPSSQMVLRGEDLLLECIAS 266
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ +W G DL T N D L I N S D+GEY C+ + VG
Sbjct: 267 G--VPTPGIMWHKKG-----GDLPAGRTKLENFDKA-LHIANVSEEDSGEYFCLASNKVG 318
Query: 266 KISTKTTVIVEGPP 279
+VIV+ P
Sbjct: 319 TSRHVISVIVKAAP 332
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 11/174 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P +W K G + +G R EN + L I+ VS +DSG Y C A
Sbjct: 256 GEDLLLECIASGVPTPGIMWHKKGGDLPAG--RTKLENFDKALHIANVSEEDSGEYFCLA 313
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G +IV P + ++ P + +A + +L C A+ + W NG
Sbjct: 314 SNKVGTSRHVISVIVKAAPFWLDE-PQNLILAPGEDGRLVCQANGNPKPSIQ--WLVNGE 370
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I + N P+ + G + + + Y+C + G + V V
Sbjct: 371 PIESSAPN----PSREVTGDTIMFRDIQSGSSAVYQCNASNEHGYLLANAFVSV 420
>gi|237858675|ref|NP_001005388.2| neurofascin isoform 1 precursor [Homo sapiens]
gi|115527434|gb|AAI17675.2| NFASC protein [Homo sapiens]
gi|219520716|gb|AAI44455.1| Unknown (protein for MGC:177997) [Homo sapiens]
Length = 1240
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 525 YRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + +Y G ++
Sbjct: 636 LTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+
Sbjct: 689 VLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 801 VQAENDFGKGPEPESV 816
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|35215309|ref|NP_874385.1| neurofascin isoform 1 precursor [Mus musculus]
gi|38372295|sp|Q810U3.1|NFASC_MOUSE RecName: Full=Neurofascin; Flags: Precursor
gi|29466308|emb|CAD65849.1| Neurofascin [Mus musculus]
Length = 1240
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 216/499 (43%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
N+ ++A + VL + P S + + + Y + C +P P W
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRW 464
Query: 124 KKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P
Sbjct: 465 FKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDP 521
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINI 238
+ ++P +QL C + L + W + + IGN E ++
Sbjct: 522 TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS----- 576
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPG 283
L I + D G Y C+ + + + K + V +G P P
Sbjct: 577 ----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPR 632
Query: 284 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
+++ ++ + S + W G N PIT Y + + F + + R+ G
Sbjct: 633 DLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSV 685
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++
Sbjct: 686 NSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNM 744
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEY 461
I+W P+ PN+ Y + WR++ ET + + NV + R + Y Y
Sbjct: 745 EITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPY 797
Query: 462 EVKVQAINDVGPGPESEVV 480
E++VQA ND G GPE + +
Sbjct: 798 EIRVQAENDFGKGPEPDTI 816
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ N+ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSNKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSNKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|355782631|gb|EHH64552.1| hypothetical protein EGM_17797 [Macaca fascicularis]
Length = 1345
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 525 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + +Y G ++
Sbjct: 636 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+
Sbjct: 689 VLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 801 VQAENDFGKGPEPESV 816
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 196/523 (37%), Gaps = 106/523 (20%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 452 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 505
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 506 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 562
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG---PSYYEQ 185
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P+
Sbjct: 563 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLA 621
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
PK R+L EL D+A VR+ + ++ +P I +++
Sbjct: 622 ALPKGRPDRPRDL---------ELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQF 665
Query: 246 TNASFA-----DAGEYECVVKSTVGKIST------KTTVIVE-----------------G 277
F D +Y V S V ++S + + E
Sbjct: 666 EEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGA 725
Query: 278 PP-GLPGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSE 329
PP PG V+ K + I WT + + P Y + R WN+ S
Sbjct: 726 PPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSR 785
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
+V+G+ V VP YE +V A N+ G G P S + D P A
Sbjct: 786 YVVGQTP-------------VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAA 828
Query: 390 PSRIGGGGGKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQS 436
P+ + +S+ W + P Q Y +WR K+ F
Sbjct: 829 PTEVKVRVMNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPG 888
Query: 437 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
+ L+ G+ V R+ F Y+ Y++++ +N G GP SE
Sbjct: 889 DRLR-----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 922
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|148707722|gb|EDL39669.1| neurofascin, isoform CRA_a [Mus musculus]
Length = 1195
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 215/503 (42%), Gaps = 67/503 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 380 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 431
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+YQC N+ ++A + VL + P S + + + Y + C +P P
Sbjct: 432 VYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIP 487
Query: 120 KFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 488 TLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV 545
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETP 234
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 546 -KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS- 603
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPP 279
L I + D G Y C+ + + + K + V +G P
Sbjct: 604 --------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRP 655
Query: 280 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 339
P +++ ++ + S + W G N PIT Y + + F + + R+
Sbjct: 656 DRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRF 708
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G +
Sbjct: 709 PGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTR 767
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFY 457
++ I+W P+ PN+ Y + WR++ ET + + NV + R +
Sbjct: 768 KNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPV 820
Query: 458 YTEYEVKVQAINDVGPGPESEVV 480
Y YE++VQA ND G GPE + +
Sbjct: 821 YVPYEIRVQAENDFGKGPEPDTI 843
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 63 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 119
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 120 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 178
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 179 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 238
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 239 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 295
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ N+ + N N L ITN S D+GEY C+ +
Sbjct: 296 IASGVPTPDIA--WYKKG---GDLPSNKAKFENFN---KALRITNVSEEDSGEYFCLASN 347
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 348 KMGSIRHTISVRVKAAP 364
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ NV E D Y
Sbjct: 290 DLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNV-------SEEDSGEYF 342
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 343 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 399
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 400 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 453
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 454 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 507
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 508 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 548
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 288 GMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLA 345
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 346 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 402
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 403 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 458
Query: 281 L 281
+
Sbjct: 459 M 459
>gi|355558859|gb|EHH15639.1| hypothetical protein EGK_01754 [Macaca mulatta]
Length = 1345
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 525 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + +Y G ++
Sbjct: 636 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+
Sbjct: 689 VLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 801 VQAENDFGKGPEPESV 816
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 196/523 (37%), Gaps = 106/523 (20%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 452 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 505
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 506 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 562
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG---PSYYEQ 185
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P+
Sbjct: 563 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLA 621
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
PK R+L EL D+A VR+ + ++ +P I +++
Sbjct: 622 ALPKGRPDRPRDL---------ELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQF 665
Query: 246 TNASFA-----DAGEYECVVKSTVGKIST------KTTVIVE-----------------G 277
F D +Y V S V ++S + + E
Sbjct: 666 EEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGA 725
Query: 278 PP-GLPGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSE 329
PP PG V+ K + I WT + + P Y + R WN+ S
Sbjct: 726 PPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSR 785
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
+V+G+ V VP YE +V A N+ G G P S + D P A
Sbjct: 786 YVVGQTP-------------VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAA 828
Query: 390 PSRIGGGGGKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQS 436
P+ + +S+ W + P Q Y +WR K+ F
Sbjct: 829 PTEVKVRVMNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPG 888
Query: 437 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
+ L+ G+ V R+ F Y+ Y++++ +N G GP SE
Sbjct: 889 DRLR-----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 922
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|237858677|ref|NP_001153803.1| neurofascin isoform 2 precursor [Homo sapiens]
Length = 1189
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 209/500 (41%), Gaps = 61/500 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLP 282
L I + D G Y CV + + + K + V +G P P
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRP 642
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + F + + +Y G
Sbjct: 643 RDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGS 695
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + +
Sbjct: 696 VNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNN 754
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTE 460
+ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 755 MEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVP 807
Query: 461 YEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE E V
Sbjct: 808 YEIRVQAENDFGKGPEPESV 827
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|341891741|gb|EGT47676.1| hypothetical protein CAEBREN_11960 [Caenorhabditis brenneri]
Length = 1186
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 208/477 (43%), Gaps = 36/477 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPERDPAMYQCRA 68
C A G P +W NG+ L+ L + R + D+ +L +R LN + D +YQC A
Sbjct: 350 CLAGGQPTPIITWSMNGKFLHE----LAEDSRRVLLDHGRILRVRSLNHDLDTGVYQCNA 405
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW--KKD 126
N L +++A + V P F+ P V + C+ +AAP+ W D
Sbjct: 406 SNPLGYVFANAFVHVRAHAPFFRM-PAARHWKVVLHSTVILDCDVDAAPEAVVRWVDADD 464
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ G+ K+F N +I V+ D G+Y C +N +G++ + RL V P+Y+ ++
Sbjct: 465 RPLQVVEGKNKLFPNHTFMIYDVNSADEGLYYCNVSNKYGINRATNRLQVF-KPTYFVRI 523
Query: 187 P--PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P ++ + A ++ C A + L + Y WT NG + E+ I L
Sbjct: 524 PTPKRLVLEAGETAEVFCEAVADPRLPIKYQWTINGKVLT-------ESQYYEILPDRLR 576
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
+ +G +C + V +IV+ P P V+ + A I+W +
Sbjct: 577 FRSVRGRHSGIIDCAAITDVDVKLASMQLIVKDVPAHPV-VEAAHCSERKANIKWVAASD 635
Query: 305 NGRPITHYKIIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
+G I Y + T++ W VI +EV+ ++ ++ L PW Y F+V+A
Sbjct: 636 HGDSIKKYIVEMFTDFKKNEW-----EVINEEVN--VNKENFEVDITLTPWVNYTFRVVA 688
Query: 364 GNELGY------GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
N G G+P T PY P+ + G G + +L ISW+PL R NA
Sbjct: 689 VNSHGRSDMKIDGQPKEDWLTCQTRPSFPYTNPTGVKGEGTEPDNLVISWKPLDRYYWNA 748
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
PN+ Y + ++ +E L E ++R F +Y ++VQ++N VGP
Sbjct: 749 PNMQYLVRYKLDEPIHGWTEFLVEDSLANYTIIRDQPTF--RKYLIQVQSVNSVGPS 803
>gi|296230536|ref|XP_002760746.1| PREDICTED: neurofascin isoform 1 [Callithrix jacchus]
Length = 1240
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 525 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + +Y G ++
Sbjct: 636 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+
Sbjct: 689 VLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 801 VQAENDFGKGPEPESV 816
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPIAQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|397504880|ref|XP_003823008.1| PREDICTED: neurofascin [Pan paniscus]
Length = 1388
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 211/501 (42%), Gaps = 63/501 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 502 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 552
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
A+YQC N+ ++A + VL + P P + C +P P
Sbjct: 553 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTL 611
Query: 122 VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 612 RWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-K 668
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 669 DPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--- 725
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGL 281
L I + D G Y CV + + + K + V +G P
Sbjct: 726 ------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDR 779
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
P +++ ++ + S + W G N PIT Y + + F + + +Y G
Sbjct: 780 PRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPG 832
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G +
Sbjct: 833 SVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKN 891
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYT 459
++ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 892 NMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYV 944
Query: 460 EYEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE E V
Sbjct: 945 PYEIRVQAENDFGKGPEPESV 965
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 202 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 258
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 259 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 317
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 318 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 377
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 378 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 433
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 434 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 486
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 412 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 464
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 465 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 521
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 522 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 575
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 576 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 629
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 630 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 670
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 360 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 419
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 420 SGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 477
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 478 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 532
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 533 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 581
>gi|348526542|ref|XP_003450778.1| PREDICTED: neuronal cell adhesion molecule-like [Oreochromis
niloticus]
Length = 1508
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 206/478 (43%), Gaps = 39/478 (8%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
TC G P WF NG + E P ED R D V+ + A+YQC A
Sbjct: 564 TCRVNGEPKPRIDWFVNG--IPIENTP-EDPSRKVEDDTVILSNVQSGSS--AVYQCNAS 618
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N+ ++A + VL P P ++ Y + C +P P W KD
Sbjct: 619 NEFGYLLANAFVSVLAEPPRVLTPP--NQVYQVITNSPALLHCASFGSPIPTITWFKDSQ 676
Query: 129 I-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
I I + I ENG L I+ +SG Y+C ATN G+ E+ L V P+ + P
Sbjct: 677 ISIRNTDPYVIHENGTLEINVAQPLNSGKYTCIATNNLGIKENHVFLEVKE-PTRILKQP 735
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEIT 246
+ + C + L W D EL + +D L I
Sbjct: 736 EYKVVQRGMSAVFECKVKHDPSLIPTMTWLK--------DRGELPDDERFEVDADSLTIR 787
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
+ + D G Y C++ +T+ + S + V P P +++ + + S + WT G N
Sbjct: 788 DVTDDDKGTYTCIMNTTLDQDSASAMLTVVEKPDPPTDLELTDQTERSVQLTWTPGDENN 847
Query: 307 RPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI + I + W N++E V G + + L P+ Y F+V+A
Sbjct: 848 SPIEKFVIQYGDLLHQPGVWTNLTE-VPGTST---------TAQLHLSPYVYYSFRVLAK 897
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N +GY EPS S QY T P + PS + G G + G+L ISW PL + N P + YK+
Sbjct: 898 NRVGYSEPSQSSRQYRTNPAAPDENPSGVQGVGTEPGNLVISWTPLTGLQSNGPGLEYKV 957
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEVV 480
WR+K+ + E+ ++ + NV VV P+ Y YE+KVQA ND G GPE EV
Sbjct: 958 QWRQKDVEKEWSAQNV---ANVSQWVVSGTPT---YVPYEIKVQAFNDYGVGPEPEVA 1009
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 191/515 (37%), Gaps = 97/515 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
C +FG P T +WF++ ++ + + D Y I +N L I P + Y C A
Sbjct: 659 CASFGSPIPTITWFKDSQI------SIRNTDPYVIHENGTLEINVAQP-LNSGKYTCIAT 711
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFV 122
N L + + L V + +P +K G + C + P P
Sbjct: 712 NNLGIKENHVFLEVKEPTRILKQPEYK--------VVQRGMSAVFECKVKHDPSLIPTMT 763
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
W KD + R ++ + +L I V+ DD G Y+C D + L V+ P
Sbjct: 764 WLKDRGELPDDERFEV-DADSLTIRDVTDDDKGTYTCIMNTTLDQDSASAMLTVVEKPDP 822
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTE-------------ELLDVAYIWTHNGVRIGNMDLN 229
L ++T R++QL + E +LL +WT N
Sbjct: 823 PTDL--ELTDQTERSVQLTWTPGDENNSPIEKFVIQYGDLLHQPGVWT-----------N 869
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVEGPPGLPGG 284
E P + L ++ + + K+ VG + S + P P G
Sbjct: 870 LTEVPGTSTTAQLHLSPYVYYS----FRVLAKNRVGYSEPSQSSRQYRTNPAAPDENPSG 925
Query: 285 VQVVEVHKTSATIQWT--DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR-YTG 341
VQ V + I WT G + P YK+ R K+V++ ++
Sbjct: 926 VQGVGTEPGNLVISWTPLTGLQSNGPGLEYKVQWRQ---------------KDVEKEWSA 970
Query: 342 RKEASIENVLVP----WSTYEFKVIAGNELGYGEPSSPSPQYN---TPADKPYQAPSRIG 394
+ A++ +V + YE KV A N+ G G P P+ + D P AP I
Sbjct: 971 QNVANVSQWVVSGTPTYVPYEIKVQAFNDYGVG----PEPEVAIGYSGEDLPLSAPESIQ 1026
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-------DTEFQSETLKEYGNVGI 447
+ WEP+ YK+++R+K+ +T+ + + L GN
Sbjct: 1027 VMVHNSTLAEVHWEPISPPSVRGKLQGYKVYYRRKHGLHETEEETDQEMQVLTFSGNRSE 1086
Query: 448 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
R+P Y+ Y + ++ +N+ G GP S+ T
Sbjct: 1087 G--RLPGLQPYSVYSLSIRVLNNKGEGPSSQSKTF 1119
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 119/298 (39%), Gaps = 33/298 (11%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN----VLTIRYLN 56
D + ++ CEA G P ++SW RNG + +E + ++ V+ I
Sbjct: 261 FDPRENIVIHCEAKGKPHPSFSWTRNGTHFD-----VEKDSKVLMKPGSGTLVIDISSER 315
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
E YQC A N+ T S + + + P + K E+ +G ++ + C P A
Sbjct: 316 AEAYEGTYQCIANNEHGTAVSDSIVIRQSRSPLWSKERNEA-IMVQKGVSLVLQCRPPAG 374
Query: 117 PKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVHGMDESKGR 173
P ++ D N +++ + NG+L S V +D+ Y C A H + +
Sbjct: 375 LPPPVIFWMDNNFQKLPLDKRVSQALNGDLYFSNVLPEDTRSDYICYARFPHTQTIQQKQ 434
Query: 174 LI---VLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGV 221
I VL E+ P P T + + L+L C A D++ W G
Sbjct: 435 PISVTVLDSSPEGERRPGFMLPLGTTSTKMVLRGQTLELECIAEGLPTPDIS--WQKEG- 491
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N + N L+I++ + DAG Y CV + +G I V V+ P
Sbjct: 492 --GELPSNRVSYHNFK---KTLKISDVNENDAGNYRCVATNNLGTIHHTIKVTVKAAP 544
>gi|83304988|sp|O94856.4|NFASC_HUMAN RecName: Full=Neurofascin; Flags: Precursor
Length = 1347
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 208/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 409
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 410 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 468
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 525
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 526 RMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 576
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 577 LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + +Y G +++
Sbjct: 637 TDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAV 689
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W
Sbjct: 690 LR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITW 748
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 749 TPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRV 801
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE E V
Sbjct: 802 QAENDFGKGPEPESV 816
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|301781638|ref|XP_002926235.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2-like [Ailuropoda
melanoleuca]
Length = 2167
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 213/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C A GVP + SW+++ ++ + L R++ + D L I L P+ D M+QC A+
Sbjct: 333 CRAKGVPPPSISWYKDAAVVEVDKL-----SRFWQRSDGGLQISGLVPD-DTGMFQCFAR 386
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N +S L V ++ P+ + PL+S +G +V + C AP+P W+K I
Sbjct: 387 NAAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERI 444
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LL+SP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 445 LASGSVQLPRFTLLESGSLLVSPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITK 503
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + V Y+W +G +G + P I +D G L
Sbjct: 504 PPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLGTEN-----NPRIRLDKNGSLH 558
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + + + W
Sbjct: 559 ISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWAKP 618
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y + N N+ W V+ VD EA+ V LVP +Y+F+
Sbjct: 619 FDGNSPLLRYVLEMSEN-NAPW-----TVLLASVD-----PEATSVMVKGLVPARSYQFR 667
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 668 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLK 727
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 728 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 782
Query: 478 EVVTIW 483
VT W
Sbjct: 783 SKVTEW 788
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 178/485 (36%), Gaps = 42/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L R+ + ++ + D Y C A N
Sbjct: 426 CETSGAPRPAITWQKGERILASGSVQLP---RFTLLESGSLLVSPTHISDAGTYTCLATN 482
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V+ + K P + G ++ + ++VW+KDG +
Sbjct: 483 SRGVDEASADL-VVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATL 541
Query: 131 GSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G+ R ++ +NG+L IS D G Y+C + G D L V P E
Sbjct: 542 GTENNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVA 601
Query: 189 KITIAAHRNLQLRCSA----------HTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
++ A R + L + + E+ + WT V + ++D E ++ +
Sbjct: 602 TLSTAERRAINLTWAKPFDGNSPLLRYVLEMSENNAPWT---VLLASVDP---EATSVMV 655
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L+ + F + V K K + + ++ E P P V S IQ
Sbjct: 656 KG-LVPARSYQFRLCAVND-VGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQ 713
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL----VP 353
W P +H + + + + + G V ++ +A + N+L +
Sbjct: 714 W-----QPPPESHQNGLLKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 762
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
W+ YE +V A N G G SS ++ T P P + + +W +
Sbjct: 763 WTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNAPSPQ 821
Query: 414 KQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
N N YK I W + + E T + I V + +TEY V G
Sbjct: 822 FINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCFTTPG 881
Query: 473 PGPES 477
GP S
Sbjct: 882 DGPRS 886
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P E QN
Sbjct: 1598 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1656
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1657 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1710
Query: 473 PGPES 477
GP S
Sbjct: 1711 DGPRS 1715
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 333
PPG P VQ +V S + W G+ P+ +Y + R W +VS +
Sbjct: 1405 PPGKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPGGRWALHSASVSHNASA 1463
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1464 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIV 1511
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1512 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1571
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1572 SLYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1614
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 39/265 (14%)
Query: 234 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 286
PN+ ++ GL +T + E + G++S T I G PP LPG +
Sbjct: 950 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1003
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 343
+ + S T+Q+ G I+ + + A+ W V H + E D R
Sbjct: 1004 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNEPD---ARS 1058
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 1059 MEVPE--LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1116
Query: 404 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 457
+ W PLP + N ++ YKI K + + +TL + R+ E+
Sbjct: 1117 WLRWVPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1168
Query: 458 --YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1169 EEWTEYRVQVQAFNAIGSGPWSQTV 1193
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1828 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1884
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1885 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1918
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 134/381 (35%), Gaps = 56/381 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 47 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 94
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 95 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPRPQVTWF 151
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + + L G
Sbjct: 152 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPVTLAVENVGG 211
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNEL 231
P+ I +A + + C A+ L+ + IW +GV + G D N
Sbjct: 212 PADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPLSGGLSDYNR- 270
Query: 232 ETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
L I + +DAG YEC + S+V + + V PP V+
Sbjct: 271 ----------RLTIPSPMGSDAGYYECEAVLRSSSVPSVIRGAFLSVLEPPQF---VKEP 317
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E H T+ + D + + I +W+ + V ++ R+ R + ++
Sbjct: 318 ERHITAEMEKVVDIPCRAKGVPPPSI--------SWYKDAAVVEVDKLSRFWQRSDGGLQ 369
Query: 349 -NVLVPWSTYEFKVIAGNELG 368
+ LVP T F+ A N G
Sbjct: 370 ISGLVPDDTGMFQCFARNAAG 390
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 79/202 (39%), Gaps = 15/202 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y++ R N +T + V+ +
Sbjct: 1304 PGPPVGILFPEVRTTSVRLIWQPPAAPNGIILAYQVTHRLN-ATTANTATVEVLAPSARQ 1362
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q P + +
Sbjct: 1363 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPGKPVVQQE 1414
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY + R+ + + N VV F
Sbjct: 1415 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPGGRWALHSASVSHNASAFVVDRLKPF 1472
Query: 457 YYTEYEVKVQAINDVGPGPESE 478
T Y+ +V+A ND+G SE
Sbjct: 1473 --TSYKFRVKATNDIGDSEFSE 1492
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R + + +
Sbjct: 1095 LQAPPDMAPANVTLRTASETSLWLRWVPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1152
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1153 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1204
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1205 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVIYKEK-DSDSQPRFWLVEGNSSRS 1263
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPES 477
++ Y YEV+V A +G G S
Sbjct: 1264 -AQLTGLGKYVLYEVQVLAFTRIGDGSPS 1291
>gi|390477462|ref|XP_002760747.2| PREDICTED: neurofascin isoform 2 [Callithrix jacchus]
Length = 1347
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 208/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 409
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 410 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 468
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 525
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 526 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 576
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 577 LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + +Y G +++
Sbjct: 637 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAV 689
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W
Sbjct: 690 LR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITW 748
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 749 TPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRV 801
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE E V
Sbjct: 802 QAENDFGKGPEPESV 816
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPIAQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 196/523 (37%), Gaps = 106/523 (20%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 452 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 505
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 506 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 562
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG---PSYYEQ 185
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P+
Sbjct: 563 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLA 621
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
PK R+L EL D+A VR+ + ++ +P I +++
Sbjct: 622 ALPKGRPDRPRDL---------ELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQF 665
Query: 246 TNASFA-----DAGEYECVVKSTVGKIST------KTTVIVE-----------------G 277
F D +Y V S V ++S + I E
Sbjct: 666 EEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGA 725
Query: 278 PP-GLPGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSE 329
PP PG V+ K + I WT + + P Y + R WN+ S
Sbjct: 726 PPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSR 785
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
+V+G+ V VP YE +V A N+ G G P S + D P A
Sbjct: 786 YVVGQTP-------------VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAA 828
Query: 390 PSRIGGGGGKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQS 436
P+ + +++ W + P Q Y +WR K+ F
Sbjct: 829 PTEVKVRVVNSTAINLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPG 888
Query: 437 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
+ L+ G+ V R+ F Y+ Y++++ +N G GP SE
Sbjct: 889 DRLR-----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 922
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|440891914|gb|ELR45352.1| Neurofascin, partial [Bos grunniens mutus]
Length = 1272
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 211/495 (42%), Gaps = 62/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 357 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 407
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 408 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 466
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 467 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 523
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L +A W + + I N E ++
Sbjct: 524 YRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDS-------- 575
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV--------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 576 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLDQATPTNRLAALPKGRPDRPRDLEL 634
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 635 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 687
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 688 LR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 746
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 747 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRV 799
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 800 QAENDFGKGPEPDTV 814
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 120/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 52 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 109 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 167
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 168 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 227
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 228 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 283
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 284 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 336
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 262 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 314
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 315 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 371
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 372 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 425
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 426 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 479
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 480 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 520
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 210 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 269
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 270 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 327
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 328 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 382
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 383 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 431
>gi|410046837|ref|XP_003952269.1| PREDICTED: contactin-1 [Pan troglodytes]
gi|410046839|ref|XP_003952270.1| PREDICTED: contactin-1 [Pan troglodytes]
Length = 627
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 18/278 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G L I NA AG Y C ++ V S ++V G
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D+ + +
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMP--- 283
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 284 ------STAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>gi|149058630|gb|EDM09787.1| neurofascin, isoform CRA_c [Rattus norvegicus]
Length = 1250
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 212/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NG+ L S P ++ D +D ++ R A+YQC
Sbjct: 368 CRANGNPKPTVQWLVNGDPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 418
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 419 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 477
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 478 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 534
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 535 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 586
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 587 -LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 645
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 646 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 698
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 699 VLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 757
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 758 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 810
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 811 VQAENDFGKGPEPETV 826
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 63 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 119
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 120 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 178
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 179 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 238
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 239 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 294
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 295 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 347
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 273 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 325
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 326 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 382
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 383 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 436
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 437 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 490
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 491 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 531
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 221 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 280
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 281 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 338
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 339 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGDPLQSAPPN-- 393
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 394 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 442
>gi|402857487|ref|XP_003893285.1| PREDICTED: neurofascin [Papio anubis]
Length = 1446
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 208/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 460 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 511
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 512 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 570
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 571 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 627
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 628 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 678
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 679 LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 738
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + +Y G +++
Sbjct: 739 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAV 791
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W
Sbjct: 792 LR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITW 850
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 851 TPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRV 903
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE E V
Sbjct: 904 QAENDFGKGPEPESV 918
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 155 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 211
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 212 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 270
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 271 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 330
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 331 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGXPTPDIA--WYKKG-- 386
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 387 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 439
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 126/523 (24%), Positives = 196/523 (37%), Gaps = 106/523 (20%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 554 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 607
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 608 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 664
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG---PSYYEQ 185
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P+
Sbjct: 665 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLA 723
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
PK R+L EL D+A VR+ + ++ +P I +++
Sbjct: 724 ALPKGRPDRPRDL---------ELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQF 767
Query: 246 TNASFA-----DAGEYECVVKSTVGKIST------KTTVIVE-----------------G 277
F D +Y V S V ++S + + E
Sbjct: 768 EEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGA 827
Query: 278 PP-GLPGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSE 329
PP PG V+ K + I WT + + P Y + R WN+ S
Sbjct: 828 PPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSR 887
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
+V+G+ V VP YE +V A N+ G G P S + D P A
Sbjct: 888 YVVGQTP-------------VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAA 930
Query: 390 PSRIGGGGGKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQS 436
P+ + +S+ W + P Q Y +WR K+ F
Sbjct: 931 PTEVKVRVMNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPG 990
Query: 437 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
+ L+ G+ V R+ F Y+ Y++++ +N G GP SE
Sbjct: 991 DRLR-----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 1024
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 313 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 372
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 373 SGXPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 430
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 431 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 485
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 486 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 534
>gi|237858630|ref|NP_001153788.1| neurofascin isoform 2 precursor [Mus musculus]
Length = 1189
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 217/504 (43%), Gaps = 69/504 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDP 61
D C A G P T W NGE L S P ++ D +D ++ R
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR-------- 414
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
A+YQC N+ ++A + VL + P S + + + Y + C +P
Sbjct: 415 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPI 470
Query: 119 PKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL
Sbjct: 471 PTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLE 528
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELET 233
V P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 529 V-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS 587
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGP 278
L I + D G Y C+ + + + K + V +G
Sbjct: 588 ---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGR 638
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
P P +++ ++ + S + W G N PIT Y + + F + + R
Sbjct: 639 PDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSR 691
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G
Sbjct: 692 FPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGT 750
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEF 456
+ ++ I+W P+ PN+ Y + WR++ ET + + NV + R +
Sbjct: 751 RKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTP 803
Query: 457 YYTEYEVKVQAINDVGPGPESEVV 480
Y YE++VQA ND G GPE + +
Sbjct: 804 VYVPYEIRVQAENDFGKGPEPDTI 827
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ N+ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSNKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|297289132|ref|XP_001096098.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Macaca
mulatta]
Length = 1183
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 207/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 282 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W P
Sbjct: 944 IVNPTLDSLTLEWHP 958
>gi|332261219|ref|XP_003279672.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Nomascus
leucogenys]
Length = 2172
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 211/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W+ + ++ E L D L I L P+ D M+QC A+N
Sbjct: 330 CQAKGVPPPSITWYNDAAVVEVEKLARFRHR----SDEGLQISGLVPD-DTGMFQCFARN 384
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 385 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 442
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 443 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G ++ N P I +D G L I
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLG-IESN----PRIRLDRNGSLHI 556
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V+ P P + V + + + WT
Sbjct: 557 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVKQLPHAPEHPVATLSTVERRAINLTWTKPF 616
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 617 DGNSPLIRYVLEMSEN-NAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 667
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 668 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 727
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 728 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 782
Query: 481 TIW 483
T W
Sbjct: 783 TEW 785
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 423 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 479
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 480 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 536
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 537 TLGIESNPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVKQLPHAPEHP 596
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + Y+ ++++E P ++D
Sbjct: 597 VATLSTVERRAINLTWTKPFDGNSPLIRYV----------LEMSENNAPWTVLLASVDPK 646
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 647 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 706
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 707 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 755
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 756 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVLPGNVHTEATNSTTIRFTWNA 814
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 815 TSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 874
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 875 TTPGDGPRS 883
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 265 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
G++S T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 977 GQVSAST--ISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGV 1034
Query: 321 ---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 377
W + H + E D + + + L P++ Y F++ N +G PS PS
Sbjct: 1035 VGEGEEWLLI--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMHQVNIVGTSPPSQPSR 1087
Query: 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEF 434
+ T P AP+ + L + W PLP + N ++ YKI + R +
Sbjct: 1088 KIQTLQAPPDMAPANVSLCTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKT 1147
Query: 435 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
S +++ G A+ + +TEY ++VQA N P S++V
Sbjct: 1148 LSHVVQDRVERGYAIKDLEE---WTEYRIQVQAFNASRSWPWSQMV 1190
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNTSS 1460
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI- 452
+ I W+P +K N + ++I +R+ + T++ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTIRGINNPGATWAELT 1568
Query: 453 ----------PSEFYY--------TEYEVKVQAINDVGPGPES 477
PS Y YE+++ N VG GP S
Sbjct: 1569 PMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 8/172 (4%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164
V I C + P P W D + + R + + L IS + DD+G++ C A N
Sbjct: 326 VDIPCQAKGVPPPSITWYNDAAVVEVEKLARFRHRSDEGLQISGLVPDDTGMFQCFARNA 385
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 441
Query: 225 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 442 -LASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++ EP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGTTATQLDVTSEPPPLDSQN 1653
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 474 GPES 477
GP S
Sbjct: 1709 GPRS 1712
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 76/196 (38%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + +P Q PSR +
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRVRP-QPPSRPMVQQE 1411
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNTSSFIVDRLKPF 1469
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483
>gi|350588710|ref|XP_003357453.2| PREDICTED: neurofascin-like, partial [Sus scrofa]
Length = 1197
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 209/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 312 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 363
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 364 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 422
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 423 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 479
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 480 RMPEDQVAQRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEEDS--------- 530
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 531 LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 590
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 591 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 643
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 644 LQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 702
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 703 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRV 755
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 756 QAENDFGKGPEPDTV 770
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ LE+ ++ NV E D Y
Sbjct: 217 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKLENFNKALRITNV-------SEEDSGEYF 269
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 270 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 326
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 327 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 380
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 381 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 434
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 435 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 475
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 112/283 (39%), Gaps = 32/283 (11%)
Query: 17 PDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---PERDPAMYQCRAKNQ 71
P+V +S W RN N P R + L I + + PE YQC A+N+
Sbjct: 21 PNVVHSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRPEEYEGEYQCFARNK 77
Query: 72 LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG-NI 129
T S+ ++ P + K L+ EG +T+ CNP P P W
Sbjct: 78 FGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEP 136
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG-RLIVLHGPSYYEQ 185
I R NG+L S V D YSC A H + + L VL E+
Sbjct: 137 ITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFNLKVLTTRGVAER 196
Query: 186 LP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P P+ T ++ +L L C A D+A W G G++ ++ + N
Sbjct: 197 TPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG---GDLPSDKAKLENF 251
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 252 N---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 291
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 18/229 (7%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 165 YSCNARFHFTHTIQQKNPFNLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 224
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
P P W K G + S + N L I+ VS +DSG Y C A+N G
Sbjct: 225 SGVPTPDIAWYKKGGDLPSDKAKLENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTIS 284
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 285 VRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN---- 337
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 338 PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 386
>gi|197098048|ref|NP_001124989.1| contactin-1 precursor [Pongo abelii]
gi|55726605|emb|CAH90067.1| hypothetical protein [Pongo abelii]
Length = 627
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 18/278 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G L I NA AG Y C ++ V S ++V G
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N + M S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYWMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYWMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 28/274 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++T C A G P W + E P+ VL I + E D +Y+
Sbjct: 258 NVTLECFALGNPVPDIRWRKVLE-------PMPSTAEISTSGAVLKIFNIQLE-DEGIYE 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N A++ V P + + ++E G ++ C P P W K
Sbjct: 310 CEAENIRGKDKHQARIYVQAF-PEWVEHINDTEV--DIGSDLYWPCVATGKPIPTIRWLK 366
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+G + G L + V+ +++G+Y C A N +G + L +L +E
Sbjct: 367 NG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEM 417
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLE 244
P K I A + ++ + + W+ + N + I I + G LE
Sbjct: 418 NPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN-------SSRILIWEDGSLE 470
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I N + D G Y C ++ GK ++ T+++ P
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|366039949|ref|NP_001242992.1| contactin-1 isoform 3 precursor [Homo sapiens]
gi|366039951|ref|NP_001242993.1| contactin-1 isoform 3 precursor [Homo sapiens]
gi|22477205|gb|AAH36569.1| CNTN1 protein [Homo sapiens]
gi|158260419|dbj|BAF82387.1| unnamed protein product [Homo sapiens]
Length = 627
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 18/278 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G L I NA AG Y C ++ V S ++V G
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 118/322 (36%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W N ++ + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS------DRYSMVGGNLVINNPDKQKDAGI 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 112 YYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D+ + +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMP----- 283
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 284 ----STAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCVAT-GKPI 359
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 28/274 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++T C A G P W + E P+ VL I + E D +Y+
Sbjct: 258 NVTLECFALGNPVPDIRWRKVLE-------PMPSTAEISTSGAVLKIFNIQLE-DEGIYE 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N A++ V P + + ++E G ++ C P P W K
Sbjct: 310 CEAENIRGKDKHQARIYVQAF-PEWVEHINDTEV--DIGSDLYWPCVATGKPIPTIRWLK 366
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+G + G L + V+ +++G+Y C A N +G + L +L +E
Sbjct: 367 NG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEM 417
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLE 244
P K I A + ++ + + W+ + N + I I + G LE
Sbjct: 418 NPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN-------SSRILIWEDGSLE 470
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I N + D G Y C ++ GK ++ T+++ P
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|47221108|emb|CAG12802.1| unnamed protein product [Tetraodon nigroviridis]
Length = 793
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 163/355 (45%), Gaps = 22/355 (6%)
Query: 138 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 197
+ N L I SR D G Y C A N G E L V E P ++ + +
Sbjct: 363 LLRNNTLRIVNSSRADEGSYVCRADNQFGSAEMTAVLWV-KDAMRVELSPHRVEVTVGES 421
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRI------GNMD----LNELETPNINIDGGLLEITN 247
+ L C A + LDV + W N I G+ + + E+ ++ L I N
Sbjct: 422 VVLSCKATHDSSLDVTFQWFFNQRPITFQQDGGHFEYIQTVRSKESSTVD-----LMIRN 476
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG Y C +++ + + ++V GPPG PG V V E+ T+AT+ WT G N
Sbjct: 477 ILLKHAGRYGCRAQTSADTVIAEAELLVRGPPGPPGVVIVEEITDTTATLSWTRGLDNHS 536
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PI+ Y + AR+ ++ W + + D TG E+++ L PW YEF+V+A N +
Sbjct: 537 PISTYNLQARSPFSLGW-----QTVKTDPDPVTGDLESAMAVRLNPWVEYEFRVVATNAI 591
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G G+PS PS T P AP+ + GG G+ +L I WEP+ E QN Y + +R
Sbjct: 592 GTGDPSVPSRGVRTKEAVPSVAPANVSGGNGRRHELVILWEPVSEEFQNGEGFGYIVAFR 651
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
N T E + + + R + T +EVKV N+ G GP S+VV I
Sbjct: 652 -ANGTRGWKEKMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNRGDGPFSKVVII 705
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 133/374 (35%), Gaps = 62/374 (16%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAKNQLKTR 75
P++ YSW N + ED R+ Q L I + P D Y C KN +
Sbjct: 147 PEIIYSWVFN----EFPSFVAEDSRRFISQHTGNLYISKVQPS-DVGSYICLVKNTVTNA 201
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
+ LTLK P + + A G V + C P P W+K
Sbjct: 202 RVLSPPTPLTLKTDGIMGEYEPKIEVH-FPTSVLAARGATVRLECFALGNPVPTITWRKI 260
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+GNI RK L I + +DSG Y C A N G KG L V +
Sbjct: 261 NGNIPKKARLRK--SQAVLEIPNIQLEDSGTYECKAENPRGGTAFKGHLQVYSESEHALI 318
Query: 186 LPPKITIAAHRNLQLRCSAHTEEL----LDVAYIWT-HNGVRIGNMDLNELETPNINIDG 240
I++ + L + T+ + + + WT V I + +
Sbjct: 319 YSCFISLCHNGVCSLLAFSGTKFIGASQVSIPRSWTVLQSVWI------------LLLRN 366
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV---------- 290
L I N+S AD G Y C + G + V+ + VEV
Sbjct: 367 NTLRIVNSSRADEGSYVCRADNQFGSAEMTAVLWVKDAMRVELSPHRVEVTVGESVVLSC 426
Query: 291 ---HKTS--ATIQWTDGATNGRPIT------HYKII--ARTNWNSTWFNVSEHVIGKEVD 337
H +S T QW N RPIT H++ I R+ +ST + +++ K
Sbjct: 427 KATHDSSLDVTFQW---FFNQRPITFQQDGGHFEYIQTVRSKESSTVDLMIRNILLKHAG 483
Query: 338 RYTGRKEASIENVL 351
RY R + S + V+
Sbjct: 484 RYGCRAQTSADTVI 497
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 91/254 (35%), Gaps = 37/254 (14%)
Query: 30 LNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPS 89
LN + E RY I D L I + MYQC+A+N T S L L+ +
Sbjct: 75 LNRTEIDAEADYRYSIYDGNLIINNASVTSQYGMYQCKAENSFGTILSREAL----LQFA 130
Query: 90 FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFEN-GNLLI 146
+ L Y+ P P+ + W + + + RR I ++ GNL I
Sbjct: 131 WNGPTLSWPVYS-----------PLVFPEIIYSWVFNEFPSFVAEDSRRFISQHTGNLYI 179
Query: 147 SPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHR 196
S V D G Y C T TN + + G P P + A
Sbjct: 180 SKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLKTDGIMGEYEPKIEVHFPTSVLAARGA 239
Query: 197 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
++L C A + + + ++ N + + +LEI N D+G Y
Sbjct: 240 TVRLECFALGNPVPTITW---------RKINGNIPKKARLRKSQAVLEIPNIQLEDSGTY 290
Query: 257 ECVVKSTVGKISTK 270
EC ++ G + K
Sbjct: 291 ECKAENPRGGTAFK 304
>gi|31874098|emb|CAD97960.1| hypothetical protein [Homo sapiens]
Length = 1183
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 207/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+ND+G PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 282 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPLSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958
>gi|402864555|ref|XP_003896525.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Papio anubis]
Length = 1183
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 207/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L I + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 282 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A ++W G G I ++K + + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958
>gi|348521534|ref|XP_003448281.1| PREDICTED: neural cell adhesion molecule L1-like [Oreochromis
niloticus]
Length = 1283
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 220/483 (45%), Gaps = 47/483 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G+P SW NG ++ +D R L + +N D A+YQCRA N
Sbjct: 372 CQADGIPSPIISWTINGVPISGVD---KDPRRTLTASGSLILEDVN-FGDTAIYQCRASN 427
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAAPKPKFVWKK--DG 127
+ T ++ + V+ L P + TYA EG + C +PKPK +W++ D
Sbjct: 428 KHGTILTNTNVYVIELPPQILTD--DGNTYAYTEGQKALLECETFGSPKPKVIWERNNDS 485
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN----VHGMDESKGRLIVLHGPSYY 183
+ + + R NG L I+ V+ D GIY+CT N + E R ++L P
Sbjct: 486 SFLLADRRVNPLSNGWLEIANVTHSDDGIYTCTVPNSNLSISAELEIFNRTVILSPPQ-- 543
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGL 242
+ + A C + + LD +I W N ++ + + ++ T +DG
Sbjct: 544 -----ALKVQAGERAIFTCLSLADPRLDPPFIQWRKNNQKLADSNNDKKYT----MDGPD 594
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L+I + D G Y C + + + + T+ + P P +Q+ + + T+ WT G
Sbjct: 595 LKIADVQPDDEGVYTCEIITKLDVAEARGTLTLWDRPDPPILLQISDPKDRTVTLSWTPG 654
Query: 303 ATNGRPITHYKI---IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ P+T Y + R+N S W K + R KE ++ + L P+ +Y F
Sbjct: 655 DDHNGPVTEYVVEFEDQRSN-ESVW---------KMLARVRENKERAVLS-LWPFMSYRF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+VIA N++G +PS PS +NTPA+ P P + + L I+W+ + + + + P
Sbjct: 704 RVIAINDVGKSDPSKPSGIHNTPAEAPDNNPEDVKSESIEPNTLVITWKKMDKTEVHGPG 763
Query: 420 IYYKIFWRKK--NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y + WR+ ++ + NV R+ + ++ YE+KVQA+N++G GPE
Sbjct: 764 FKYCVQWRQAVGGGPDWHEK------NVTEPPFRVDNVGNFSAYEIKVQALNEIGRGPEP 817
Query: 478 EVV 480
+ V
Sbjct: 818 DPV 820
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 12/213 (5%)
Query: 72 LKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNI 129
LK S++ LR +P + TY A G + + C E P P+ W ++DG +
Sbjct: 244 LKVNPSNSVLR--NRRPQMMRPTGHHSTYHALRGQTLELECIVEGLPTPEVSWMRRDGEL 301
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
+ + +F+ L + +S D G Y C A N G + L V P Y+ + P
Sbjct: 302 SETRTTKDMFDR-RLRFTNISESDGGEYQCIAENSQGNTKHIYMLTVEAAP-YWIKEPVS 359
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 249
A ++L C A + + WT NGV I +D + T + G L+ + + +
Sbjct: 360 QLYAPGETVRLDCQA--DGIPSPIISWTINGVPISGVDKDPRRT--LTASGSLI-LEDVN 414
Query: 250 FADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
F D Y+C + G I T T V ++E PP +
Sbjct: 415 FGDTAIYQCRASNKHGTILTNTNVYVIELPPQI 447
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 120/304 (39%), Gaps = 51/304 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLP----LEDQDRYFIQDNVLTIRYLNPERDP 61
D CEA G P + W ++GE + + P E + T+ LN +
Sbjct: 69 DFVMNCEASGNPSPIFRWAKDGEDFDPGSDPELKVSESSGSFAFYTLSNTMDTLNKYK-- 126
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N+L T S+ + + PS +K ET A EG + + CNP +
Sbjct: 127 GKYVCYASNELGTAVSNEAILNTDVPPSQQKDKKVDET-ADEGKSFILKCNPPQSSMEPI 185
Query: 122 VWKKDGNI--IGSGGRRKIFENGNL----LISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
+ D + I R + ++GNL L S SRDD Y+C NV + R I
Sbjct: 186 IHWMDLRLRHIELSKRVMVGKDGNLYFANLESSDSRDD---YTC---NVQYL---ATRTI 236
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL----NEL 231
+ P+ + P + R +R + H T++ +R ++L L
Sbjct: 237 LAKEPTSLKVNPSNSVLRNRRPQMMRPTGHHS---------TYHALRGQTLELECIVEGL 287
Query: 232 ETPNIN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
TP ++ DG L L TN S +D GEY+C+ +++ G + V
Sbjct: 288 PTPEVSWMRRDGELSETRTTKDMFDRRLRFTNISESDGGEYQCIAENSQGNTKHIYMLTV 347
Query: 276 EGPP 279
E P
Sbjct: 348 EAAP 351
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+S YE KV A NE+G G P Y+ D P +AP +G + ++W P+ +E
Sbjct: 798 FSAYEIKVQALNEIGRGPEPDPVIGYSG-EDVPLEAPMDVGVEIINSTTIKVTWAPIDKE 856
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--------YTEYEVKV 465
+ YKI + +K + + V P+E ++ Y +KV
Sbjct: 857 TVRGHLLGYKIHYTRKVHRSHHRGRRAQELESTVVVKTEPNEKKKVISDLRPFSNYTLKV 916
Query: 466 QAINDVGPGPESEVV 480
N G GP SE +
Sbjct: 917 TVYNIKGEGPFSEAL 931
>gi|149058634|gb|EDM09791.1| neurofascin, isoform CRA_g [Rattus norvegicus]
Length = 1234
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 212/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NG+ L S P ++ D +D ++ R A+YQC
Sbjct: 352 CRANGNPKPTVQWLVNGDPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 402
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 403 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 461
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 462 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 518
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 519 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 570
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 571 -LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 629
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 630 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 682
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 683 VLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 741
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 742 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 794
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 795 VQAENDFGKGPEPETV 810
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 223 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 278
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 279 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 331
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 257 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 310 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 366
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 367 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 421 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 474
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 475 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 205 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 265 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 322
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 323 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGDPLQSAPPN-- 377
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 378 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 426
>gi|149058633|gb|EDM09790.1| neurofascin, isoform CRA_f [Rattus norvegicus]
Length = 1336
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 212/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NG+ L S P ++ D +D ++ R A+YQC
Sbjct: 352 CRANGNPKPTVQWLVNGDPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 402
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 403 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 461
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 462 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 518
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 519 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 570
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 571 -LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 629
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 630 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 682
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 683 VLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 741
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 742 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 794
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 795 VQAENDFGKGPEPETV 810
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 223 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 278
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 279 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 331
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 257 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 310 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 366
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 367 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 421 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 474
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 475 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 205 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 265 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 322
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 323 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGDPLQSAPPN-- 377
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 378 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 426
>gi|237858623|ref|NP_001153786.1| neurofascin isoform 1 precursor [Rattus norvegicus]
gi|38372259|sp|P97685.2|NFASC_RAT RecName: Full=Neurofascin; Flags: Precursor
Length = 1240
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 212/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NG+ L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWLVNGDPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 525 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 636 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 689 VLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 801 VQAENDFGKGPEPETV 816
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGDPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|113679606|ref|NP_001038270.1| neuronal cell adhesion molecule precursor [Danio rerio]
Length = 1285
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 201/474 (42%), Gaps = 33/474 (6%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
TC+ G P T +W NG + S D R + D V+T+ + A+YQC A
Sbjct: 375 TCDVDGNPKPTITWSVNGNPIESSH---NDPSRK-VSDGVITLSDVQTGSS-AVYQCNAS 429
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++A + VL P L E + C +P PK W KD
Sbjct: 430 NDYGYLLANAFVSVLAEPPRVLTS-LNHEYSVISNSRALLDCASFGSPLPKITWFKDSQS 488
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
I + I +NG L I+ +SG Y+C A+N G E+ L V P+ + P
Sbjct: 489 ILNSDLYHIHKNGTLEINVAQPQNSGKYTCIASNNLGNKENHVHLQVKE-PTRIIRQPEY 547
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNA 248
+ + C + L + IW D EL + P + L I +
Sbjct: 548 KEVQRNSIAVFECKVKHDPTLIPSMIWLK--------DNGELPDDPRFEVGSDSLTIHDV 599
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
+ D G Y C+ +T+ + S T+ V P P +++ + + S + WT G + P
Sbjct: 600 TEDDEGTYTCIRNTTLDQDSASATLTVVEQPDPPTDLELTDQRERSVRLTWTPGDEHNSP 659
Query: 309 ITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I + I + + W N++E V G A +E L P+ Y F+V+A N
Sbjct: 660 IKLFLIQYEDSLHEPGVWLNMTE-VSGTST-------TAQLE--LSPYVYYSFRVLALNG 709
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G E S PS QY T KP PS + G ++ISW L + N P + YK+ W
Sbjct: 710 VGLSESSDPSRQYRTNPAKPDVNPSDVEVSGTSPDTMTISWRELSGLESNGPGLQYKVSW 769
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
R K+ ++ + TL NV VV F T YEV VQA+ND G GP EVV
Sbjct: 770 RMKDAEQWTTVTL---ANVSQHVVTGTPTF--TLYEVTVQAVNDYGEGPRPEVV 818
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 192/508 (37%), Gaps = 96/508 (18%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRA 68
C +FG P +WF++ + +LNS D Y I N L I P+ + Y C A
Sbjct: 470 CASFGSPLPKITWFKDSQSILNS--------DLYHIHKNGTLEINVAQPQ-NSGKYTCIA 520
Query: 69 KNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPK--PK 120
N L + + L+V + +P +K+ + ++ +F C + P P
Sbjct: 521 SNNLGNKENHVHLQVKEPTRIIRQPEYKEV---------QRNSIAVFECKVKHDPTLIPS 571
Query: 121 FVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+W KD + R FE G+ L I V+ DD G Y+C D + L V+
Sbjct: 572 MIWLKDNGELPDDPR---FEVGSDSLTIHDVTEDDEGTYTCIRNTTLDQDSASATLTVVE 628
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTE-----ELLDVAY--------IWTHNGVRIGN 225
P L ++T R+++L + E +L + Y +W + G
Sbjct: 629 QPDPPTDL--ELTDQRERSVRLTWTPGDEHNSPIKLFLIQYEDSLHEPGVWLNMTEVSGT 686
Query: 226 MDLNELE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 284
+LE +P + +L + +++ + ++ K P P
Sbjct: 687 STTAQLELSPYVYYSFRVLALNGVGLSESSDPSRQYRTNPAK-----------PDVNPSD 735
Query: 285 VQVVEVHKTSATIQWTD--GATNGRPITHYKIIART----NWNS-TWFNVSEHVIGKEVD 337
V+V + TI W + G + P YK+ R W + T NVS+HV+
Sbjct: 736 VEVSGTSPDTMTISWRELSGLESNGPGLQYKVSWRMKDAEQWTTVTLANVSQHVV----- 790
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIG 394
TG ++ YE V A N+ G G P P+ + + P AP +
Sbjct: 791 --TGTPT---------FTLYEVTVQAVNDYGEG----PRPEVVLGYSGENSPTVAPENVK 835
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI-----AV 449
+ + WE +P YK+ ++K Q + +E V I V
Sbjct: 836 VSVQSGTEAEVHWEAVPLSSVRGRLKGYKVTYQKMRSLHKQ-DYDRENPQVLIFSGEETV 894
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPGPES 477
R+P Y+ Y + ++A N G GP S
Sbjct: 895 GRLPDLHPYSHYRLNIRAFNGHGDGPSS 922
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 107/286 (37%), Gaps = 21/286 (7%)
Query: 88 PSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 146
PSF P +ES T +G + + C + P P W K + SG L I
Sbjct: 262 PSFLHPPGMESTTMVLKGDTLELECIADGLPTPNISWTKVNGELPSGRFSFYSFQKTLKI 321
Query: 147 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT 206
V+ D G Y C A N G + ++V P ++ P + +A L C
Sbjct: 322 KEVTEADGGDYRCIAKNRMGSSQHTITVVVRAAP-FWISAPQNLILAPKETGNLTCDVDG 380
Query: 207 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ + N + + D P+ + G++ +++ + Y+C + G
Sbjct: 381 NPKPTITWSVNGNPIESSHND------PSRKVSDGVITLSDVQTGSSAVYQCNASNDYGY 434
Query: 267 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 326
+ V V P E S + D A+ G P+ KI TWF
Sbjct: 435 LLANAFVSVLAEPPRVLTSLNHEYSVISNSRALLDCASFGSPLP--KI--------TWFK 484
Query: 327 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGE 371
S+ ++ D Y K ++E NV P ++ ++ IA N LG E
Sbjct: 485 DSQSILNS--DLYHIHKNGTLEINVAQPQNSGKYTCIASNNLGNKE 528
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 123/325 (37%), Gaps = 67/325 (20%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ----DNVLTIRYLN 56
+D + ++ CEA G P ++SW RNG + E P + + + V+ I
Sbjct: 52 IDPRENINIFCEAKGKPHPSFSWTRNGTHFDVEKDP-----KVVMMPGTGNLVIDISGEK 106
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
E +YQC A+N+ + S+ + + P + K E T G ++ + C P A
Sbjct: 107 AEVYEGVYQCIARNEHGSAVSNNIVIRQSRSPLWSKEKNEPITVQ-RGTSLILQCRPPAG 165
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGR 173
P ++ D N + R NG+L S V +D+ Y C A H + +
Sbjct: 166 LPPPIIFWMDNNFQRLPQNSRVSQALNGDLYFSNVIMEDTRNDYICYARFPHTQTIQQKQ 225
Query: 174 LIV-----------------LHGPSYY------EQLPPKITIAAHRNLQLRCSAHTEELL 210
I L+G ++ E++P + + + T EL
Sbjct: 226 PITVKVLDIEAMNDTVLAAFLNGSDFWGDSPSGERVPSFLHPPGMESTTMVLKGDTLELE 285
Query: 211 DVAYIWTHNGVRIGNMDLNELETPNIN---IDGGL-------------LEITNASFADAG 254
+A + L TPNI+ ++G L L+I + AD G
Sbjct: 286 CIA---------------DGLPTPNISWTKVNGELPSGRFSFYSFQKTLKIKEVTEADGG 330
Query: 255 EYECVVKSTVGKISTKTTVIVEGPP 279
+Y C+ K+ +G TV+V P
Sbjct: 331 DYRCIAKNRMGSSQHTITVVVRAAP 355
>gi|332237968|ref|XP_003268176.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Nomascus
leucogenys]
Length = 1183
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 208/483 (43%), Gaps = 39/483 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPSDE--RFTVDRD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+ND+G PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPA 818
Query: 479 VVT 481
VVT
Sbjct: 819 VVT 821
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 282 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIVHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958
>gi|237858625|ref|NP_001153785.1| neurofascin isoform 2 precursor [Rattus norvegicus]
Length = 1189
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 211/500 (42%), Gaps = 61/500 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NG+ L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLP 282
L I + D G Y C+ + + + K + V +G P P
Sbjct: 588 -----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRP 642
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + F + + ++ G
Sbjct: 643 RDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGS 695
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + +
Sbjct: 696 VNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNN 754
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTE 460
+ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 755 MEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVP 807
Query: 461 YEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE E V
Sbjct: 808 YEIRVQAENDFGKGPEPETV 827
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|403257020|ref|XP_003921136.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1183
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 204/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM ++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + + N + +D
Sbjct: 541 WIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE-------RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 109/278 (39%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + +L + ++ Y L I +++ E D YQC
Sbjct: 282 LLLECIAEGLPTPLIYWAKEDGILPT------NRTSYKNFKKTLQITHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + ++ P
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 539
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 105 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 279 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 336
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + + V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 447
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 123/311 (39%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 168 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-----GNMDLN 229
I + S E TIAA+ + A + ++ GN+ L
Sbjct: 228 ISVKVISVDEL---NDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASSKEELRGNVLLL 284
Query: 230 E-----LETPNI---NIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
E L TP I DG L L+IT+ S AD+G Y+C+ K+ +G I
Sbjct: 285 ECIAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIH 344
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 345 HTISVRVKAAP 355
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 282 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG V+V V+ T A + W + G + Y+I NS N I K++
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 889
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 890 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLKIVNP 947
Query: 399 KIGDLSISWEP 409
+ L++ W+P
Sbjct: 948 TLDSLTLEWDP 958
>gi|81158224|ref|NP_005001.3| neuronal cell adhesion molecule isoform B precursor [Homo sapiens]
Length = 1183
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 207/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+ND+G PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 282 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958
>gi|380810882|gb|AFE77316.1| neurofascin isoform 2 precursor [Macaca mulatta]
Length = 1189
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 210/500 (42%), Gaps = 61/500 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVE-------------GPPGLP 282
L I + D G Y CV + + + K TV+ + G P P
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPIGRPDRP 642
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + F + + +Y G
Sbjct: 643 RDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGS 695
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + +
Sbjct: 696 VNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNN 754
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTE 460
+ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 755 MEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVP 807
Query: 461 YEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE E V
Sbjct: 808 YEIRVQAENDFGKGPEPESV 827
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 125/520 (24%), Positives = 196/520 (37%), Gaps = 100/520 (19%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 463 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 516
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 517 ILGK--AENQVRLEVKDPTRIYR-MPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDE 573
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL +Q P
Sbjct: 574 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLA-----DQATP 627
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+AA + EL D+A VR+ + ++ +P I +++
Sbjct: 628 TNRLAAL-PIGRPDRPRDLELTDLA----ERSVRLTWIPGDDNNSP---ITDYVVQFEED 679
Query: 249 SFA-----DAGEYECVVKSTVGKIST------KTTVIVE-----------------GPP- 279
F D +Y V S V ++S + + E PP
Sbjct: 680 QFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPE 739
Query: 280 GLPGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVI 332
PG V+ K + I WT + + P Y + R WN+ S +V+
Sbjct: 740 SNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVV 799
Query: 333 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 392
G+ V VP YE +V A N+ G G P S + D P AP+
Sbjct: 800 GQTP-------------VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTE 842
Query: 393 IGGGGGKIGDLSISWEPL-PREKQNAPNIYYKIFWR------------KKNDTEFQSETL 439
+ +S+ W + P Q Y +WR K+ F + L
Sbjct: 843 VKVRVMNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRL 902
Query: 440 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
+ G+ V R+ F Y+ Y++++ +N G GP SE
Sbjct: 903 R-----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 933
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|359073801|ref|XP_003587093.1| PREDICTED: neurofascin [Bos taurus]
gi|296479435|tpg|DAA21550.1| TPA: neurofascin homolog (chicken) isoform 3 [Bos taurus]
Length = 1188
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 210/500 (42%), Gaps = 61/500 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 363 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 414
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 415 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 473
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 474 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 530
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L +A W + + I N E ++
Sbjct: 531 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDS---- 586
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLP 282
L I + D G Y CV + + + K + V +G P P
Sbjct: 587 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRP 641
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + F + + ++ G
Sbjct: 642 RDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGS 694
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+++ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + +
Sbjct: 695 VNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNN 753
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTE 460
+ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 754 MEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVP 806
Query: 461 YEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE + V
Sbjct: 807 YEIRVQAENDFGKGPEPDTV 826
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 46 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 102
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 103 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 161
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 162 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 221
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 222 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 278
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 279 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 330
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 331 KMGSIRHTISVRVKAAP 347
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 273 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 325
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 326 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 382
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 383 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 436
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 437 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 490
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 491 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 531
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 271 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 328
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 329 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 385
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 386 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 441
Query: 281 L 281
+
Sbjct: 442 M 442
>gi|149058631|gb|EDM09788.1| neurofascin, isoform CRA_d [Rattus norvegicus]
Length = 1189
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 211/500 (42%), Gaps = 61/500 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NG+ L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLP 282
L I + D G Y C+ + + + K + V +G P P
Sbjct: 588 -----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRP 642
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + F + + ++ G
Sbjct: 643 RDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGS 695
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + +
Sbjct: 696 VNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNN 754
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTE 460
+ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 755 MEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVP 807
Query: 461 YEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE E V
Sbjct: 808 YEIRVQAENDFGKGPEPETV 827
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|410254538|gb|JAA15236.1| neuronal cell adhesion molecule [Pan troglodytes]
Length = 1183
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 207/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+ND+G PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 282 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958
>gi|297483858|ref|XP_002693951.1| PREDICTED: neurofascin isoform 1 [Bos taurus]
gi|296479433|tpg|DAA21548.1| TPA: neurofascin homolog (chicken) isoform 1 [Bos taurus]
Length = 1236
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 211/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 357 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 407
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 408 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 466
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 467 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 523
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L +A W + + I N E ++
Sbjct: 524 YRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDS-------- 575
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 576 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 634
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 635 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 687
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 688 VLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 746
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 747 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 799
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE + V
Sbjct: 800 VQAENDFGKGPEPDTV 815
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 120/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 52 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 109 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 167
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 168 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 227
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 228 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 283
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 284 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 336
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 262 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 314
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 315 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 371
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 372 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 425
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 426 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 479
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 480 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 520
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 210 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 269
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 270 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 327
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 328 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 382
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 383 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 431
>gi|149058628|gb|EDM09785.1| neurofascin, isoform CRA_a [Rattus norvegicus]
Length = 1205
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 210/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NG+ L S + D +D ++ R A+YQC
Sbjct: 385 CRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 436
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 437 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 495
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 496 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 552
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 553 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 603
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y C+ + + + K + V +G P P +++
Sbjct: 604 LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 663
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 664 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 716
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 717 LH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 775
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 776 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRV 828
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE E V
Sbjct: 829 QAENDFGKGPEPETV 843
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 63 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 119
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 120 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 178
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 179 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 238
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 239 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 295
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 296 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 347
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 348 KMGSIRHTISVRVKAAP 364
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 290 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 342
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 343 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 399
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 400 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 453
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 454 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 507
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 508 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 548
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 288 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 345
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 346 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 402
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 403 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 458
Query: 281 L 281
+
Sbjct: 459 M 459
>gi|149058629|gb|EDM09786.1| neurofascin, isoform CRA_b [Rattus norvegicus]
Length = 1200
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 210/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NG+ L S + D +D ++ R A+YQC
Sbjct: 385 CRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 436
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 437 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 495
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 496 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 552
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 553 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 603
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y C+ + + + K + V +G P P +++
Sbjct: 604 LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 663
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 664 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 716
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 717 LH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 775
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 776 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRV 828
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE E V
Sbjct: 829 QAENDFGKGPEPETV 843
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 63 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 119
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 120 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 178
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 179 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 238
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 239 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 295
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 296 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 347
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 348 KMGSIRHTISVRVKAAP 364
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 290 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 342
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 343 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 399
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 400 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 453
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 454 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 507
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 508 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 548
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 288 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 345
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 346 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 402
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 403 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 458
Query: 281 L 281
+
Sbjct: 459 M 459
>gi|358415963|ref|XP_590378.6| PREDICTED: neurofascin [Bos taurus]
Length = 1215
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 209/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 336 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 387
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 388 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 446
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 447 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 503
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L +A W + + I N E ++
Sbjct: 504 RMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKEEDS--------- 554
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 555 LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 614
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 615 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 667
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 668 LR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 726
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 727 TPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRV 779
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 780 QAENDFGKGPEPDTV 794
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 120/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 31 VDPRDNILIECEAKGNPAPSFHWTRNSKFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 87
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 88 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 146
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 147 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 206
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 207 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 262
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 263 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 315
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 241 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 293
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 294 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 350
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 351 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 404
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 405 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 458
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 459 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 499
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 189 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 248
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 249 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 306
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 307 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 361
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 362 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 410
>gi|324502734|gb|ADY41201.1| Neuroglian [Ascaris suum]
Length = 1047
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 213/470 (45%), Gaps = 31/470 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NVLTIRYLNPERDPAMYQCRA 68
C A G P W+ NG+ L+ + + +R I D +L I L+ + D A+YQC A
Sbjct: 217 CIASGSPTPIIQWYMNGKPLHE----VAENERRLILDGGRILRINNLDHDVDTAVYQCNA 272
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW--KKD 126
N L +++A + V P FK P V + C+ +AAP+ W D
Sbjct: 273 SNSLGYIFANAFVNVRAHAPRFKM-PDRRIWKVVRKTTVEMSCDVDAAPEAVVRWVDAND 331
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+I G+ ++F N L I+ V+ D G+Y C +N +G++ + +L V P+++ ++
Sbjct: 332 QSIAIIPGKIQLFPNHTLRITQVNSADEGLYYCNVSNKYGINRAYNKLEVF-NPTHFVRV 390
Query: 187 PP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P K + AH + L C A T+ L+ Y WTHNGV I D T N L
Sbjct: 391 PSPKKSVVEAHESFNLFCEAVTDPRLNADYTWTHNGVPIN--DSEHFRTTNTT-----LH 443
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
+ + +G +CVV + V + +IV P P + V+ ++ A I+W +
Sbjct: 444 LEDVRGWHSGSIDCVVVTDVDVKVSGIELIVLDVPARP-ILSEVDCNERRAMIRWQRSSD 502
Query: 305 NGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
+G IT + + T++ W V E E + T +A I L PW Y F+VIA
Sbjct: 503 HGDKITSFLVQMHTDFEKGKWQTVLE-----EENTSTDFYQADI--TLSPWVNYTFRVIA 555
Query: 364 GNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
N G +P T PY PS + G + +L I W P+ + + NAP+++Y
Sbjct: 556 KNSHGESDPGYKDGAICRTKESFPYGNPSNVTAEGNEPNNLVIRWIPMDKYEWNAPDLHY 615
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ +R ET E V+R F EY V+V+A+N VG
Sbjct: 616 IVRYRLNQQGAQWKETHIEDPLANHTVIRDQPTF--KEYIVQVEAVNRVG 663
>gi|403269332|ref|XP_003926703.1| PREDICTED: contactin-1 isoform 3 [Saimiri boliviensis boliviensis]
gi|403269334|ref|XP_003926704.1| PREDICTED: contactin-1 isoform 4 [Saimiri boliviensis boliviensis]
Length = 627
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 18/278 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G L I NA AG Y C ++ V S ++V G
Sbjct: 565 NGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRG 602
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNSYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 106/274 (38%), Gaps = 28/274 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++T C A G P W + E P+ VL I + E D +Y+
Sbjct: 258 NVTLECFALGNPVPDIRWRKVLE-------PMPSTAEISTSGAVLKIFNIQLE-DEGIYE 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N A++ V P + + ++E G ++ C P P W K
Sbjct: 310 CEAENIRGKDKHQARIYVQAF-PEWVEHINDTEV--DIGSDLYWPCVATGKPIPTIRWLK 366
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+G + G L + V+ +++G+Y C A N HG + L +L +E
Sbjct: 367 NG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILALAPTFEM 417
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLE 244
P K I A + ++ + + W+ + N + I I + G LE
Sbjct: 418 NPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN-------SSRILIWEDGSLE 470
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I N + D G Y C ++ GK ++ T+++ P
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 118/322 (36%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W N ++ + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS------DRYSMVGGNLVINNPDKQKDAGI 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 112 YYCLASNSYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D+ + +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMP----- 283
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 284 ----STAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCVAT-GKPI 359
>gi|296203082|ref|XP_002806914.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Callithrix
jacchus]
Length = 2108
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 209/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + SW+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 350 CRAKGVPPPSISWYKDAAVVEVEKLARFRQR----SDGGLQISGLVPD-DTGMFQCFARN 404
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 405 SAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 462
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 463 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 521
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + Y+W +G +G M+ N P I +D G L I
Sbjct: 522 PQDQSVIKGTQASMVCGVTHDPRVTIRYVWEKDGATLG-MESN----PRIRLDRNGSLHI 576
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + W
Sbjct: 577 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKPF 636
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 637 DGNSPLIRYVLEMSEN-NAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 687
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P QN Y
Sbjct: 688 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPAESHQNGILKGYI 747
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 748 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 802
Query: 481 TIW 483
T W
Sbjct: 803 TEW 805
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 136/380 (35%), Gaps = 53/380 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 63 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 110
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 111 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPRPQVTWF 167
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH------ 178
+DG I R I L+I D+G Y A N D + I L
Sbjct: 168 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVERDVG 227
Query: 179 GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
GP+ I +A + L C A+ L+ + IW +GV L
Sbjct: 228 GPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LL 278
Query: 233 TPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
+ I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 279 SGGISDHNRRLTIPNPTASDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPE 335
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE- 348
H T+ + D + + I +W+ + V +++ R+ R + ++
Sbjct: 336 RHITAEMEKVVDIPCRAKGVPPPSI--------SWYKDAAVVEVEKLARFRQRSDGGLQI 387
Query: 349 NVLVPWSTYEFKVIAGNELG 368
+ LVP T F+ A N G
Sbjct: 388 SGLVPDDTGMFQCFARNSAG 407
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 116/286 (40%), Gaps = 39/286 (13%)
Query: 216 WTHNGVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
W G RI + N T PN+ ++ +T + E ++ G+
Sbjct: 858 WHLTGYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQV 914
Query: 270 KTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NS 322
+ I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 915 SASTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGE 974
Query: 323 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382
W + H + E D + + + L P++ Y F++ N +G PS PS + T
Sbjct: 975 EWLLI--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTL 1027
Query: 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLK 440
P AP+ + L + W PLP + N ++ YKI K + ++ +TL
Sbjct: 1028 QAPPDMAPANVSLPTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLS 1084
Query: 441 EYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ E+ +TEY V+VQA N +G GP S+ V
Sbjct: 1085 H-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 1125
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1768 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1824
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1825 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1858
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1531 YEIRMSVYNAVGEG-PSSPPHEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1589
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1590 GDIQGYKIYFWEAQRQNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1644
Query: 474 GPES 477
GP S
Sbjct: 1645 GPRS 1648
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 24/253 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D +E P++N T SF + V S + S K + P P V
Sbjct: 987 DARSMEVPDLN------PFTYYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVS 1039
Query: 287 VVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++W + NG P + YKI +R++ + + HV+ V+R
Sbjct: 1040 LPTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS---HVVQDRVER--- 1093
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S + T P P+ +
Sbjct: 1094 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSSGPTNVSALATTSS 1149
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+ + W +P +N + YK+ +++K D++ Q GN + ++ Y Y
Sbjct: 1150 SMLVRWSDVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS-AQLTGLGKYVLY 1207
Query: 462 EVKVQAINDVGPG 474
EV+V A +G G
Sbjct: 1208 EVQVLAFTRIGDG 1220
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 52/133 (39%), Gaps = 11/133 (8%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T V+ +
Sbjct: 1236 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-TTTANTAMVEVLAPSARQ 1294
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
YT L P S Y F++ A G+GE + D+P Q PSR
Sbjct: 1295 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPVAQQE 1346
Query: 399 KIGDLSI--SWEP 409
+ S+ SWEP
Sbjct: 1347 DVRARSVLLSWEP 1359
>gi|213626374|gb|AAI71560.1| Si:dkey-240a12.1 protein [Danio rerio]
Length = 1291
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 201/474 (42%), Gaps = 33/474 (6%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
TC+ G P T +W NG + S D R + D V+T+ + A+YQC A
Sbjct: 354 TCDVDGNPKPTITWSVNGNPIESSH---NDPSRK-VSDGVITLSDVQTGSS-AVYQCNAS 408
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++A + VL P L E + C +P PK W KD
Sbjct: 409 NDYGYLLANAFVSVLAEPPRVLTS-LNHEYSVISNSRALLDCASFGSPLPKITWFKDSQN 467
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
I + I +NG L I+ +SG Y+C A+N G E+ L V P+ + P
Sbjct: 468 ILNSDLYHIHKNGTLEINVAQPQNSGKYTCIASNNLGNKENHVHLQVKE-PTRIIRQPEY 526
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNA 248
+ + C + L + IW D EL + P + L I +
Sbjct: 527 KEVQRNSIAVFECKVKHDPTLIPSMIWLK--------DNGELPDDPRFEVGSDSLTIHDV 578
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
+ D G Y C+ +T+ + S T+ V P P +++ + + S + WT G + P
Sbjct: 579 TEDDEGTYTCIRNTTLDQDSASATLTVVEQPDPPTDLELTDQRERSVRLTWTPGDEHNSP 638
Query: 309 ITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 366
I + I + + W N++E V G A +E L P+ Y F+V+A N
Sbjct: 639 IKLFLIQYEDSLHEPGVWLNMTE-VSGTST-------TAQLE--LSPYVYYSFRVLALNG 688
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G E S PS QY T KP PS + G ++ISW L + N P + YK+ W
Sbjct: 689 VGLSESSDPSRQYRTNPAKPDVNPSDVEVSGTSPDTMTISWRELSGLESNGPGLQYKVSW 748
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
R K+ ++ + TL NV VV F T YEV VQA+ND G GP EVV
Sbjct: 749 RMKDAEQWTTVTL---ANVSQHVVTGTPTF--TLYEVTVQAVNDYGEGPRPEVV 797
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 192/508 (37%), Gaps = 96/508 (18%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRA 68
C +FG P +WF++ + +LNS D Y I N L I P+ + Y C A
Sbjct: 449 CASFGSPLPKITWFKDSQNILNS--------DLYHIHKNGTLEINVAQPQ-NSGKYTCIA 499
Query: 69 KNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPK--PK 120
N L + + L+V + +P +K+ + ++ +F C + P P
Sbjct: 500 SNNLGNKENHVHLQVKEPTRIIRQPEYKEV---------QRNSIAVFECKVKHDPTLIPS 550
Query: 121 FVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+W KD + R FE G+ L I V+ DD G Y+C D + L V+
Sbjct: 551 MIWLKDNGELPDDPR---FEVGSDSLTIHDVTEDDEGTYTCIRNTTLDQDSASATLTVVE 607
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTE-----ELLDVAY--------IWTHNGVRIGN 225
P L ++T R+++L + E +L + Y +W + G
Sbjct: 608 QPDPPTDL--ELTDQRERSVRLTWTPGDEHNSPIKLFLIQYEDSLHEPGVWLNMTEVSGT 665
Query: 226 MDLNELE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 284
+LE +P + +L + +++ + ++ K P P
Sbjct: 666 STTAQLELSPYVYYSFRVLALNGVGLSESSDPSRQYRTNPAK-----------PDVNPSD 714
Query: 285 VQVVEVHKTSATIQWTD--GATNGRPITHYKIIART----NWNS-TWFNVSEHVIGKEVD 337
V+V + TI W + G + P YK+ R W + T NVS+HV+
Sbjct: 715 VEVSGTSPDTMTISWRELSGLESNGPGLQYKVSWRMKDAEQWTTVTLANVSQHVV----- 769
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIG 394
TG ++ YE V A N+ G G P P+ + + P AP +
Sbjct: 770 --TGTPT---------FTLYEVTVQAVNDYGEG----PRPEVVLGYSGENSPTVAPENVK 814
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI-----AV 449
+ + WE +P YK+ ++K Q + +E V I V
Sbjct: 815 VSVQSETEAEVHWEAVPLSSVRGRLKGYKVTYQKMRSLHKQ-DYDRENPQVLIFSGEETV 873
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPGPES 477
R+P Y+ Y + ++A N G GP S
Sbjct: 874 GRLPDLHPYSHYRLNIRAFNGHGDGPSS 901
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 120/305 (39%), Gaps = 47/305 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ----DNVLTIRYLN 56
+D + ++ CEA G P ++SW RNG + E P + + + V+ I
Sbjct: 51 IDPRENINIFCEAKGKPHPSFSWTRNGTHFDVEKDP-----KVVMMPGTGNLVIDISGEK 105
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
E +YQC A+N+ + S+ + + P + K E T G ++ + C P A
Sbjct: 106 AEVYEGVYQCIARNEHGSAVSNNIVIRQSRSPLWSKEKNEPITVQ-RGTSLILQCRPPAG 164
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGR 173
P ++ D N + R NG+L S V +D+ Y C A H + +
Sbjct: 165 LPPPIIFWMDNNFQRLPQNSRVSQALNGDLYFSNVIMEDTRNDYICYARFPHTQTIQQKQ 224
Query: 174 LI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
I VL E++P + + + T EL +A +
Sbjct: 225 PITVKVLDNSPSGERVPSFLHPPGMESTTMVLKGDTLELECIA---------------DG 269
Query: 231 LETPNIN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVI 274
L TPNI+ ++G L L+I + AD G+Y C+ K+ +G TV+
Sbjct: 270 LPTPNISWTKVNGELPSGRFSFYSFQKTLKIKEVTEADGGDYSCLAKNRMGSSQHTITVV 329
Query: 275 VEGPP 279
V P
Sbjct: 330 VRAAP 334
>gi|410986305|ref|XP_003999451.1| PREDICTED: neurofascin isoform 3 [Felis catus]
Length = 1351
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 211/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 359 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 409
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 410 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 468
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 525
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 526 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 577
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 578 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 636
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 637 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 689
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+
Sbjct: 690 VLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEIT 748
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 749 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 801
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE + V
Sbjct: 802 VQAENDFGKGPEPDTV 817
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 54 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 111 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 169
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 170 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 229
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 230 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLVLECIASGVPTPDIA--WYKKG-- 285
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 286 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 338
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 264 DLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 316
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 317 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 373
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 374 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 427
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 428 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 481
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 482 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 522
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + ++ L+VLT + PSF + S G ++ + C
Sbjct: 212 YSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLVLECIA 271
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 272 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 330 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 384
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 385 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 433
>gi|301616394|ref|XP_002937635.1| PREDICTED: protein sidekick-2-like [Xenopus (Silurana) tropicalis]
Length = 2174
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 202/481 (41%), Gaps = 33/481 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP SW+++ L++ D + L I L P+ D M+QC A+N
Sbjct: 333 CQAKGVPQPIISWYKDAVLIDIR----RDARFRLVSSGSLRISGLIPD-DTGMFQCFARN 387
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ +S L V ++ P+ + P +T +G V + C AP+P W+K ++
Sbjct: 388 EAGEVQTSTYLAVTSIAPNITRAP--QDTTVIDGTAVVLQCETSGAPRPAITWQKGDRVL 445
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C+ATN G D++ +IV +
Sbjct: 446 ASGSIQLPRFTLLESGSLLISPAHISDTGTYTCSATNSRGADDASADIIVW-ARTRITNP 504
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + Y+W +G + + +P I +D G L I
Sbjct: 505 PSDQSVIKGTKASMSCGVSHDSSVAIRYVWEKDGFPVSVEN-----SPRIQLDKNGTLHI 559
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + W
Sbjct: 560 SQTWSGDIGTYTCRVLSVGGNDSRSAHLRVRQLPHAPENPVATLSLVESRAINLTWVKPF 619
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W ++ +D + A + LVP +Y+F++ A
Sbjct: 620 DGNSPLLRYIVEVSEN-NAPW-----TILLGSLD---PEQTALVVRNLVPARSYQFRLCA 670
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 671 ANDVGKGQFSKDTQRVSLPEEPPSAPPQNVMASGRTNQSIMIQWQPAPENHQNGILKGYV 730
Query: 424 I-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ + +Q L N I + + +T YE++V A N G G S VT
Sbjct: 731 VRYCLSGLPVGYQYRNL---SNPSINHLLLEDLIIWTNYEIEVAAFNSAGVGVFSGKVTE 787
Query: 483 W 483
W
Sbjct: 788 W 788
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 179/492 (36%), Gaps = 44/492 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L R+ + ++ + D Y C A N
Sbjct: 426 CETSGAPRPAITWQKGDRVLASGSIQLP---RFTLLESGSLLISPAHISDTGTYTCSATN 482
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA + ++ + P + G +++ + +++ ++VW+KDG +
Sbjct: 483 SRGADDASADI-IVWARTRITNPPSDQSVIKGTKASMSCGVSHDSSVAIRYVWEKDGFPV 541
Query: 131 G--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R ++ +NG L IS D G Y+C +V G D L V P E
Sbjct: 542 SVENSPRIQLDKNGTLHISQTWSGDIGTYTCRVLSVGGNDSRSAHLRVRQLPHAPENPVA 601
Query: 189 KITIAAHRNLQLR----CSAHTEELLDVAYIWTHNG---VRIGNMDLNELETPNINIDGG 241
+++ R + L ++ L + + +N + +G++D +
Sbjct: 602 TLSLVESRAINLTWVKPFDGNSPLLRYIVEVSENNAPWTILLGSLDPEQTA--------- 652
Query: 242 LLEITNASFADAGEYECVVKSTVGK----ISTKTTVIVEGPPGLP-GGVQVVEVHKTSAT 296
L + N A + ++ + VGK T+ + E PP P V S
Sbjct: 653 -LVVRNLVPARSYQFRLCAANDVGKGQFSKDTQRVSLPEEPPSAPPQNVMASGRTNQSIM 711
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL----V 352
IQW N + + R + +S +G + Y SI ++L +
Sbjct: 712 IQWQPAPENHQNGILKGYVVR-------YCLSGLPVGYQ---YRNLSNPSINHLLLEDLI 761
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
W+ YE +V A N G G S ++ T P P + + +W P
Sbjct: 762 IWTNYEIEVAAFNSAGVGVFSGKVTEW-TLQGVPTVPPENVKTEAVNSTAIRFTWNPPSP 820
Query: 413 EKQNAPNIYYKIF-WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ N N YK+ W + E T++ V I +T Y +
Sbjct: 821 QFVNGINQGYKLMVWEPGQEDEIMVITVRPKFQENTHVGIISGLKKFTSYITSILCFTTP 880
Query: 472 GPGPESEVVTIW 483
G GP S+ +W
Sbjct: 881 GDGPRSQPQLVW 892
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 104/260 (40%), Gaps = 25/260 (9%)
Query: 23 WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRA---KNQLKTRYSS 78
W +NG +PL + F LTI LNP D Y C A + + +
Sbjct: 254 WKKNG-------VPLSNGVTEF--GRFLTI--LNPVLSDAGYYSCEATLRSSSVPPVSAG 302
Query: 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRR 136
A L VL P F K P T E V I C + P+P W KD +I R
Sbjct: 303 AYLTVLE-PPQFVKEPDRHLTAEMEKV-VEIPCQAKGVPQPIISWYKDAVLIDIRRDARF 360
Query: 137 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR 196
++ +G+L IS + DD+G++ C A N G ++ L V + P T+
Sbjct: 361 RLVSSGSLRISGLIPDDTGMFQCFARNEAGEVQTSTYLAVTSIAPNITRAPQDTTVIDGT 420
Query: 197 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGE 255
+ L+C T A W G R+ + ++ P ++ G L I+ A +D G
Sbjct: 421 AVVLQC--ETSGAPRPAITW-QKGDRV--LASGSIQLPRFTLLESGSLLISPAHISDTGT 475
Query: 256 YECVVKSTVGKISTKTTVIV 275
Y C ++ G +IV
Sbjct: 476 YTCSATNSRGADDASADIIV 495
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + ++ TI W+ G PIT Y I AR + W ++ I KE YT +
Sbjct: 1836 ISRYSSAITIHWSSGDPGKSPITRYIIEARPSDEGLW-DILIKDIPKEATSYTFSIDILK 1894
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ V +Y+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1895 QGV-----SYDFRVIAVNDYGYGTPSAPSPSVSAQKANPF 1929
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 105/290 (36%), Gaps = 42/290 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+ + L +L + RY I + +R A Y C
Sbjct: 47 LVLTCMAEGSWPLEFKWLRDHKELTKFSL----EYRYMIT---------SLDRTHAGYYC 93
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET-YAGEGGNVTIFCNPEAA--PKPKFVW 123
++ R + R ++ ++ + +T + G+ + P A P+P+ W
Sbjct: 94 CI---VRNRMGALLQRKTEVQVAYMGNFEDGDTSLSVSHGDAAVINAPNIASFPQPQVTW 150
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL------ 177
+DG I R I +N L+I D+G Y A N D + I L
Sbjct: 151 FRDGRKIPPTNRIAITKNNTLVILSSVAPDTGRYYVQAVNDKNGDNKTSQPITLTVENVG 210
Query: 178 -----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
P + + + C A+ L + +W NGV + N
Sbjct: 211 GPADPIAPIIIIPPQNTSVVTGTSEVSMECVANARPLTKLNIVWKKNGVPLSN------- 263
Query: 233 TPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 279
+ G L I N +DAG Y C + S+V +S + V PP
Sbjct: 264 --GVTEFGRFLTILNPVLSDAGYYSCEATLRSSSVPPVSAGAYLTVLEPP 311
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 43/285 (15%)
Query: 220 GVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTK 270
G +I + N+ T PN+ ++ GL +T + AG ++ G+
Sbjct: 930 GYKISWEEFNQTNTRVTHYLPNVTLEYRVTGLTSLTTYTIQVAG------MTSKGQGVVS 983
Query: 271 TTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 326
++ I G PP LPG + + + S T+Q+ G I+ + + A+ N T
Sbjct: 984 SSTISSGVPPELPGAPSNLGISNIGSRSVTLQFRPGFDGKTSISKWLVEAQVG-NPT--E 1040
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
+ V+ ++ + + L P++ Y F++ N +G PS PS + T P
Sbjct: 1041 SDDWVLIYQLANEPNARSLGVSG-LRPYNYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPP 1099
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGN 444
P+ L + W PLP + N ++ YKI + + L + G
Sbjct: 1100 SMFPANETLRTASQTSLWVRWVPLPEMEYNGNPDSVGYKIRYAR----------LDKKGK 1149
Query: 445 VGIAVV--RIPSEFY------YTEYEVKVQAINDVGPGPESEVVT 481
V+ RI E+ +TEY V++QA N +G GP S V+T
Sbjct: 1150 PFTHVIYDRIEREYTIEDLEEWTEYAVQIQAFNAIGAGPWSPVIT 1194
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE +V N G G S P + A P P I L ++WEP P E QN
Sbjct: 1598 YEIRVSMYNAAGEGPSSIPQEVFVGEA-VPTAPPQNIAIASTTAVQLDVTWEPPPLEAQN 1656
Query: 417 APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKIF+ +KN+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1657 GDIQGYKIFYWEILRKNETEKVRTLFLPETG------VKLKNLTGYTTYLISVAAFNAAG 1710
Query: 473 PGPESEVV 480
GP + +
Sbjct: 1711 DGPRGQPI 1718
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIG 333
PP P +Q +V + + W G+ P+ +Y I + + W +S +
Sbjct: 1405 PPSKPTVLQE-DVKARTVLLSWDPGSDGLSPVRYYTIQTLELPKGKWVVHSATISHNSTS 1463
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1464 AVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESEALTTLQAAPGEAPTIL 1511
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+ ++ N + + I +R+ +S T++ N G +
Sbjct: 1512 SVNPHTTTSVLIRWQAPAEDRINGILLGFCIRFRELAYDGLRSFTMQSINNPGAKWAELT 1571
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
+ + + YE++V N G GP S
Sbjct: 1572 ASYMMRNLSEPTLTQYELDNLNKHKRYEIRVSMYNAAGEGPSS 1614
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 259 VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYK 313
+V ++ + ++ ++ PP + P + +TS ++W + NG P + YK
Sbjct: 1079 IVGTSPPSLPSRRIQTLQAPPSMFPANETLRTASQTSLWVRWVPLPEMEYNGNPDSVGYK 1138
Query: 314 I-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 372
I AR + F HVI ++R E +IE+ L W+ Y ++ A N +G G P
Sbjct: 1139 IRYARLDKKGKPFT---HVIYDRIER-----EYTIED-LEEWTEYAVQIQAFNAIGAG-P 1188
Query: 373 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 432
SP T P P+ + + + W +P ++N + YK+ +++K D+
Sbjct: 1189 WSPVITARTRESVPSSGPTNVSALATTSSSILVRWSEIPEPERNGLILGYKVLYKEK-DS 1247
Query: 433 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ + GN + ++ Y YE++V A +G G S
Sbjct: 1248 DTSTHFWLVEGNSSRS-AQLSGLGKYVLYEIQVLAFTRIGDGAAS 1291
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 90/232 (38%), Gaps = 23/232 (9%)
Query: 255 EYECVVKSTVGKISTKTTVIVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G + T I+E PG P G+ EV TS + W A I
Sbjct: 1276 EIQVLAFTRIGDGAASTPAILERTLDDVPGPPVGILFPEVRTTSVRLIWQPPAAPNGIIL 1335
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R N + + V+ V +YT L P S Y F++ A G+G
Sbjct: 1336 AYQITHRLNATNA-NTATVEVLNPSVRQYTA-------TALRPESIYLFRITAQTRKGWG 1387
Query: 371 EPSSPSPQYNTPADKPYQAPSR--IGGGGGKIGDLSISWEPLPREKQNAPNIYYKI--FW 426
E + D+P Q PS+ + K + +SW+ P +P YY I
Sbjct: 1388 EAAEALVVTTEKRDRP-QPPSKPTVLQEDVKARTVLLSWD--PGSDGLSPVRYYTIQTLE 1444
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
K S T+ + P +T Y+ +V+A ND+G SE
Sbjct: 1445 LPKGKWVVHSATISHNSTSAVVDRLKP----FTSYKFRVKATNDIGDSEYSE 1492
>gi|432865237|ref|XP_004070484.1| PREDICTED: neural cell adhesion molecule L1-like [Oryzias latipes]
Length = 1276
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 210/485 (43%), Gaps = 50/485 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P T W NG L E+ R ++ L + ++ E D A+YQC A N
Sbjct: 373 CQADGTPSPTIRWTVNGARLP------ENSKRIRVESGSLILEHVVFE-DTAVYQCLASN 425
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNI 129
+ T +++ + V+ L P + + E Y+ EG + C +PKPK W+++G++
Sbjct: 426 KHGTIFTNTHVYVINLPPQILTK--DGEIYSHIEGQRALLQCETFGSPKPKVTWEREGSL 483
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN----VHGMDESKGRLIVLHGPSYYEQ 185
+ + R + +G L I+ V+ DD G+Y+C N + E R ++L P +
Sbjct: 484 LLAEPRVNLLTSGALEIANVTLDDKGLYNCNVQNSNLSITAELEVFNRTVILSMPQDLKA 543
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE-LETPNINIDGGLLE 244
P + C A L+D + R N L E + D L
Sbjct: 544 QPGTSAV-------FTCKA----LVDPHFRDPQIQWRKDNQKLQESISDEKYTFDESDLI 592
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I + + D G Y C V +++ T+ + P P + + + T++WT G
Sbjct: 593 IADVNADDEGVYTCEVITSLDMAKADGTLTLIDRPDPPSRLLLADPDSRVVTLRWTPGDD 652
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
+ P+ Y I N+ E K + + A + L P+ +Y+F++ A
Sbjct: 653 HNSPVKDYVIEFEDQ------NLKERGWQKLKKVKSNKDHAVLS--LRPYMSYKFRISAI 704
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G PS PS YNT A+ P + P + L I+W+ + + + N P+ +YK+
Sbjct: 705 NEVGNSGPSQPSDIYNTSAEAPDKNPENVRSESVHPNTLVIAWKEMEKHEFNGPDFHYKV 764
Query: 425 FWRKKNDT------EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
WR+ + L ++G+VG + +EVKVQA N+ G GPE +
Sbjct: 765 MWRRAVGSGPIWHENITKVPLVDFGDVG----------SFAAFEVKVQAANEKGDGPEPD 814
Query: 479 VVTIW 483
V ++
Sbjct: 815 PVIVY 819
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 197/501 (39%), Gaps = 106/501 (21%)
Query: 7 LTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
L C A G+P +W R +GEL S T+ R +R+LN E D Y
Sbjct: 279 LDLECIAQGLPTPRVTWLRKDGELSESRTVKESFNHR---------LRFLNVSESDGGEY 329
Query: 65 QCRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
QC A N T+ + +LT++ P + K P+ S+ YA G V + C + P P
Sbjct: 330 QCIADN---TQGKAKHTFMLTVEAAPYWIKEPV-SQLYAA-GETVRLDCQADGTPSPTIR 384
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
W +G + +R E+G+L++ V +D+ +Y C A+N HG I + Y
Sbjct: 385 WTVNGARLPENSKRIRVESGSLILEHVVFEDTAVYQCLASNKHGT-------IFTNTHVY 437
Query: 183 YEQLPPKIT---------IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
LPP+I I R L L+C V W G + L
Sbjct: 438 VINLPPQILTKDGEIYSHIEGQRAL-LQCETFGSPKPKVT--WEREGSLL-------LAE 487
Query: 234 PNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKT-----TVIVEGPPGL---PGG 284
P +N + G LEI N + D G Y C V+++ I+ + TVI+ P L PG
Sbjct: 488 PRVNLLTSGALEIANVTLDDKGLYNCNVQNSNLSITAELEVFNRTVILSMPQDLKAQPGT 547
Query: 285 VQV------VEVHKTSATIQW-TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
V V+ H IQW D I+ K F+ S+ +I
Sbjct: 548 SAVFTCKALVDPHFRDPQIQWRKDNQKLQESISDEKYT---------FDESDLIIAD--- 595
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
A E V Y +VI ++ + + T D+P PSR+
Sbjct: 596 -----VNADDEGV------YTCEVITSLDMAKADGTL------TLIDRP-DPPSRLLLAD 637
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR------ 451
+++ W P + N+P Y I EF+ + LKE G + V+
Sbjct: 638 PDSRVVTLRW--TPGDDHNSPVKDYVI--------EFEDQNLKERGWQKLKKVKSNKDHA 687
Query: 452 IPSEFYYTEYEVKVQAINDVG 472
+ S Y Y+ ++ AIN+VG
Sbjct: 688 VLSLRPYMSYKFRISAINEVG 708
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 97 SETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDS 154
S TY A G + + C + P P+ W +KDG + S ++ F N L VS D
Sbjct: 268 SSTYLALRGQTLDLECIAQGLPTPRVTWLRKDGELSESRTVKESF-NHRLRFLNVSESDG 326
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A N G + L V P Y+ + P AA ++L C A +
Sbjct: 327 GEYQCIADNTQGKAKHTFMLTVEAAP-YWIKEPVSQLYAAGETVRLDCQADGTPSPTIR- 384
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV- 273
WT NG R+ + I ++ G L + + F D Y+C+ + G I T T V
Sbjct: 385 -WTVNGARLPE------NSKRIRVESGSLILEHVVFEDTAVYQCLASNKHGTIFTNTHVY 437
Query: 274 IVEGPPGL 281
++ PP +
Sbjct: 438 VINLPPQI 445
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 120/308 (38%), Gaps = 58/308 (18%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLP---LEDQDRYFIQDNVLTIRYLNPERDPA 62
+ +CEA G P +++W ++G + + P + + F +N +
Sbjct: 69 EFIMSCEASGNPQPSFTWTKDGHKFDPRSEPHLKVSEHPGSFEFKASNGSNMVNLKSYQG 128
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N L T S + PS +K +S A EG N+T+ CNP PK V
Sbjct: 129 KYVCYATNNLGTAMSKEATLSIDGLPSLQKEK-DSIFRATEGSNMTLKCNP---PKSSMV 184
Query: 123 -------WKKDGNIIGSGGRRKIFENGNLLISPV----SRDDSGIYSCTATNVHGMDESK 171
WK I R + ++GNL + + SRDD Y C N+ M+
Sbjct: 185 PVIHWMDWKLRH--IELSDRVMVGKDGNLYFANLKTTDSRDD---YIC---NLQYMET-- 234
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL--- 228
R I+ P + ++ P +I +R Q+ + T+ +R +DL
Sbjct: 235 -RTILTKDP-FTLEVKPSNSIVHNRRPQMVTPTGSSS--------TYLALRGQTLDLECI 284
Query: 229 -NELETPNIN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKT 271
L TP + DG L L N S +D GEY+C+ +T GK
Sbjct: 285 AQGLPTPRVTWLRKDGELSESRTVKESFNHRLRFLNVSESDGGEYQCIADNTQGKAKHTF 344
Query: 272 TVIVEGPP 279
+ VE P
Sbjct: 345 MLTVEAAP 352
>gi|354466537|ref|XP_003495730.1| PREDICTED: protein sidekick-2 isoform 1 [Cricetulus griseus]
Length = 2172
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 211/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ L+ E L Q D L I L P+ D M QC A N
Sbjct: 330 CRAKGVPPPSITWYKDAALVEVEKLTRFKQR----NDGGLQISGLLPD-DTGMLQCFAHN 384
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 385 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 442
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 443 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 555
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + + + + W
Sbjct: 556 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTWAKP 615
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y I+ + N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 616 FDGNSPLMRY-ILEMSENNAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFR 664
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 665 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 724
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 725 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 779
Query: 478 EVVTIW 483
VT W
Sbjct: 780 SKVTEW 785
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 138/383 (36%), Gaps = 48/383 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTRFSL----EYRYMITSLDRT--------HAGFYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+N++ + SF++ GE V + P+P+ W +D
Sbjct: 92 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA-VIRAPRISSFPRPQVTWFRD 150
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPS 181
G I R I L+I D+G Y A N D + I L GP+
Sbjct: 151 GRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPA 210
Query: 182 YYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
I +A + + C A+ L+ + IW +G + N
Sbjct: 211 DPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALLSN---------G 261
Query: 236 INIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
I+ L ITN + +DAG YEC + S+V ++ + V PP V+ E H
Sbjct: 262 ISDYNRRLTITNPTLSDAGYYECEAVLRSSSVSPVTRGAYLSVLEPPQF---VKEPERHI 318
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVL 351
T+ + D + + I TW+ + V +++ R+ R + ++ + L
Sbjct: 319 TAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVEKLTRFKQRNDGGLQISGL 370
Query: 352 VPWSTYEFKVIAGNELGYGEPSS 374
+P T + A N G + S+
Sbjct: 371 LPDDTGMLQCFAHNAAGEAQTST 393
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 41/266 (15%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1003
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE-----VDRYTGRKE 344
+ S T+Q+ G I+ + + A+ VIG+ + + + +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWVVEAQVG-----------VIGEGEEWLLIYQLSNEPD 1052
Query: 345 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
A V L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 1053 ARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETS 1112
Query: 403 LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 457
L + W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1113 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIED 1164
Query: 458 ---YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1165 LEEWTEYRVQVQAFNAIGSGPWSQAV 1190
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1888
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1460
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1568
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1569 SLYSMRNLTRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPLS 1611
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQN 1653
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V + A N G
Sbjct: 1654 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSIAAFNAAGD 1708
Query: 474 GPES 477
GP S
Sbjct: 1709 GPRS 1712
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1359
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
Y + L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1360 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1411
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1412 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1469
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVMGRTRESVPSS 1201
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1260
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289
>gi|410986307|ref|XP_003999452.1| PREDICTED: neurofascin isoform 4 [Felis catus]
Length = 1190
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 210/500 (42%), Gaps = 61/500 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 365 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 416
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 417 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 475
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 476 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 532
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 533 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 588
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLP 282
L I + D G Y CV + + + K + V +G P P
Sbjct: 589 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRP 643
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + F + + ++ G
Sbjct: 644 RDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGS 696
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+++ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + +
Sbjct: 697 VNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNN 755
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTE 460
+ I+W P+ PN+ Y + WR++ ET + + NV + R + Y
Sbjct: 756 MEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVP 808
Query: 461 YEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE + V
Sbjct: 809 YEIRVQAENDFGKGPEPDTV 828
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 48 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 104
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 105 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 163
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 164 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 223
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 224 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTASSQMVLRGMDLVLEC 280
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 281 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 332
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 333 KMGSIRHTISVRVKAAP 349
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 275 DLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 327
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 328 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 384
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 385 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 438
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 439 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 492
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 493 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 533
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLVLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 330
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 281 L 281
+
Sbjct: 444 M 444
>gi|338723805|ref|XP_003364801.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Equus
caballus]
Length = 1183
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 205/485 (42%), Gaps = 45/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGKPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 480
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 481 EWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-K 537
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P+ + P + + C + L W + + N +
Sbjct: 538 DPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPN-------DGRFTV 590
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
D L +T+ S D G Y CV +T+ +S + V P P +++ + S +
Sbjct: 591 DKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVDVPNPPFDLELTDQLDKSVQLS 650
Query: 299 WTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
WT G N PIT + I + W + +E + + + L P+
Sbjct: 651 WTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQTTAQLKLSPYVN 700
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+W+PL + N
Sbjct: 701 YSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESN 760
Query: 417 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG P
Sbjct: 761 GPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAP 815
Query: 476 ESEVV 480
E VV
Sbjct: 816 EPAVV 820
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 113/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ L E D YQ
Sbjct: 282 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQILQVSEADSGNYQ 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 334 CIAKNALGAIHHTISVTV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGKPKPRISWLS 390
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 391 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 446
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 447 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALR----EDIY 496
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ + G LEI A G Y CV ++ +G + + ++ P
Sbjct: 497 VLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 119/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C+P
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQALVLPCSPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 168 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 228 ISVKVISVDELNDTIAANLSDTEFYGVKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 287
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I S AD+G Y+C+ K+
Sbjct: 288 A--EGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQILQVSEADSGNYQCIAKNA 339
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 340 LGAIHHTISVTVKAAP 355
>gi|410986303|ref|XP_003999450.1| PREDICTED: neurofascin isoform 2 [Felis catus]
Length = 1244
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 211/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 359 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 409
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 410 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 468
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 525
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 526 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 577
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 578 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 636
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 637 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 689
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+
Sbjct: 690 VLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEIT 748
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 749 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 801
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE + V
Sbjct: 802 VQAENDFGKGPEPDTV 817
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 54 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 111 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 169
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 170 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 229
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 230 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLVLECIASGVPTPDIA--WYKKG-- 285
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 286 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 338
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 264 DLVLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 316
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 317 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 373
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 374 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 427
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 428 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 481
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 482 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 522
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + ++ L+VLT + PSF + S G ++ + C
Sbjct: 212 YSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLVLECIA 271
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 272 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 330 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 384
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 385 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 433
>gi|351701670|gb|EHB04589.1| Protein sidekick-2, partial [Heterocephalus glaber]
Length = 2137
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 209/485 (43%), Gaps = 41/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 312 CRAKGVPAPSITWYKDAAVVEVEKLARFRQR----GDGGLQISGLVPD-DTGMFQCFARN 366
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 367 SAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGTSVVLACETSGAPRPAITWQKGERIL 424
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 425 ASGSVQLPRFTLLESGSLLISPTHISDAGSYTCLATNSRGVDEASADLVVW-ARTRITRP 483
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + Y+W +G + M+ N P I +D G L I
Sbjct: 484 PQDQSVIKGTQASMVCGVAHDPRVTIRYVWEKDGATL-TMESN----PRIRLDKNGSLHI 538
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
T D G Y C V S G S + V P P + + + + W
Sbjct: 539 TQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWAKPF 598
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKV 361
P+ Y + N N+ W + V EA+ V LVP +Y+F++
Sbjct: 599 DGNSPLIRYVLEMSEN-NAPWTTLLASV----------DPEATSVMVKGLVPARSYQFRL 647
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 648 CAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKG 707
Query: 422 YKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 708 YIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSS 762
Query: 479 VVTIW 483
VT W
Sbjct: 763 KVTEW 767
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 135/381 (35%), Gaps = 53/381 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L Q Y I T Y+C
Sbjct: 23 LVLTCMAEGSWPLEFKWLHNNRELTKFSLEYR-QVEYMITSLDRT--------HAGFYRC 73
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 74 VVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSISHGEAA---VIRAPRIASFPRPQVTWF 130
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 131 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGG 190
Query: 180 PSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNEL 231
P+ +PPK T +A + + C A+ L + IW G ++ G D N
Sbjct: 191 PADPIAPTIIVPPKNTSVVAGTSEVTMECVANARPLTKLHIIWKKGGAQVSSGLSDYNR- 249
Query: 232 ETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
L I N + DAG Y+C + S+V + V PP V+
Sbjct: 250 ----------RLTIPNPTVGDAGYYQCEAVLRSSSVAPAVRGAHLSVLEPPQF---VKEP 296
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E H T+ + D + + I TW+ + V +++ R+ R + ++
Sbjct: 297 ERHITAEMEKVVDIPCRAKGVPAPSI--------TWYKDAAVVEVEKLARFRQRGDGGLQ 348
Query: 349 -NVLVPWSTYEFKVIAGNELG 368
+ LVP T F+ A N G
Sbjct: 349 ISGLVPDDTGMFQCFARNSAG 369
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1384 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASS 1442
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1443 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEDSESLTTLQAAPDEAPTVL 1490
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL++ N G +
Sbjct: 1491 SVTPHTTTSVLIRWQPPAEDKVNGILLGFRIRYRELLYEGLRGFTLRDINNPGAKWAELT 1550
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1551 SLYSMRNLSRPSLTQYELENLNKHRRYEIRMSVYNAVGEGPLS 1593
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G SSP + A P AP + G L ++WEP P + QN
Sbjct: 1577 YEIRMSVYNAVGEGPLSSPQEVFVGEA-VPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1635
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW ++KN TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1636 GDIQGYKIYFWEAQRKNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1689
Query: 473 PGPESEVV 480
GP S V
Sbjct: 1690 DGPRSTPV 1697
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1814 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1870
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1871 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1904
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 39/265 (14%)
Query: 234 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 286
PN+ ++ GL +T + E + G++S T I G PP LPG +
Sbjct: 929 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 982
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 343
+ + S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 983 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLL--HQLSNEPDA----R 1036
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 1037 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1095
Query: 404 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 457
+ W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1096 WLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVPDRVEREYTIEDL 1147
Query: 458 --YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S V
Sbjct: 1148 EEWTEYRVQVQAFNAIGSGPWSPAV 1172
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1074 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1131
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P SP+ T P
Sbjct: 1132 -HVVPDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSPAVLGRTRESVPSS 1183
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1184 GPTNVSALATTSSSMLVRWNEIPEADRNGLILGYKVRYKEK-DSDSQPRFWLVEGNASRS 1242
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+I Y YEV+V A +G S+
Sbjct: 1243 -AQITGLGKYVLYEVQVLAFTRIGAASPSQ 1271
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A+ I Y+I R N +T + V+ +
Sbjct: 1283 PGPPMGILFPEVRTTSVRLIWQPPASPNGIILAYQITHRLN-ATTANTAAVEVLAPSARQ 1341
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
+T L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1342 FTASG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1393
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1394 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASSFTVDRLKPF 1451
Query: 457 YYTEYEVKVQAINDVGPGPESE 478
T Y+ +V+A ND+G SE
Sbjct: 1452 --TSYKFRVKATNDIGDSEFSE 1471
>gi|344236284|gb|EGV92387.1| Protein sidekick-2 [Cricetulus griseus]
Length = 2103
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 211/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ L+ E L Q D L I L P+ D M QC A N
Sbjct: 261 CRAKGVPPPSITWYKDAALVEVEKLTRFKQR----NDGGLQISGLLPD-DTGMLQCFAHN 315
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 316 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 373
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 374 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 432
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 433 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 486
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + + + + W
Sbjct: 487 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTWAKP 546
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y I+ + N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 547 FDGNSPLMRY-ILEMSENNAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFR 595
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 596 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 655
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 656 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 710
Query: 478 EVVTIW 483
VT W
Sbjct: 711 SKVTEW 716
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 111/280 (39%), Gaps = 27/280 (9%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDP 61
+++T C A P + W ++G LL++ + D +R LTI NP D
Sbjct: 162 SEVTMECVANARPLIKLHIIWRKDGALLSNG---ISDYNRR------LTI--TNPTLSDA 210
Query: 62 AMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A + + A L VL P F K P E A V I C + P
Sbjct: 211 GYYECEAVLRSSSVSPVTRGAYLSVLE-PPQFVKEP-ERHITAEMEKVVDIPCRAKGVPP 268
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KD + + R K +G L IS + DD+G+ C A N G ++ L V
Sbjct: 269 PSITWYKDAALVEVEKLTRFKQRNDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAV 328
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P T+ ++ L C T A W G RI + ++ P
Sbjct: 329 TSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRF 383
Query: 237 N-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 384 TLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 423
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 121/327 (37%), Gaps = 36/327 (11%)
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y+C +N++ + SF++ GE V + P+P+
Sbjct: 19 FYRCIVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA-VIRAPRISSFPRPQVT 77
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH---- 178
W +DG I R I L+I D+G Y A N D + I L
Sbjct: 78 WFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENV 137
Query: 179 -GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
GP+ I +A + + C A+ L+ + IW +G + N
Sbjct: 138 GGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALLSN------ 191
Query: 232 ETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
I+ L ITN + +DAG YEC + S+V ++ + V PP V+
Sbjct: 192 ---GISDYNRRLTITNPTLSDAGYYECEAVLRSSSVSPVTRGAYLSVLEPPQF---VKEP 245
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E H T+ + D + + I TW+ + V +++ R+ R + ++
Sbjct: 246 ERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVEKLTRFKQRNDGGLQ 297
Query: 349 -NVLVPWSTYEFKVIAGNELGYGEPSS 374
+ L+P T + A N G + S+
Sbjct: 298 ISGLLPDDTGMLQCFAHNAAGEAQTST 324
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1763 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1819
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1820 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1853
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 41/266 (15%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 878 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 934
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE-----VDRYTGRKE 344
+ S T+Q+ G I+ + + A+ VIG+ + + + +
Sbjct: 935 IGPRSVTLQFRPGYDGKTSISRWVVEAQVG-----------VIGEGEEWLLIYQLSNEPD 983
Query: 345 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
A V L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 984 ARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETS 1043
Query: 403 LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 457
L + W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1044 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIED 1095
Query: 458 ---YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1096 LEEWTEYRVQVQAFNAIGSGPWSQAV 1121
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1333 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1391
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1392 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1439
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1440 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1499
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1500 SLYSMRNLTRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPLS 1542
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1526 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQN 1584
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V + A N G
Sbjct: 1585 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSIAAFNAAGD 1639
Query: 474 GPES 477
GP S
Sbjct: 1640 GPRS 1643
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 1232 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1290
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
Y + L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1291 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1342
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1343 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1400
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1401 --TSYKFRVKATNDIG 1414
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1023 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1080
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1081 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVMGRTRESVPSS 1132
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1133 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1191
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1192 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1220
>gi|47228829|emb|CAG07561.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1197
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 222/490 (45%), Gaps = 38/490 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+D+ C G P W +NGEL + E+ R + D+ + + PE D A+Y
Sbjct: 273 SDVHIKCSVSGKPSSDIIWRKNGELFIDDP---ENNRR--VLDDTVVLHNAGPE-DTAVY 326
Query: 65 QCRAKNQLKTRYSSAQLRVLT------LKPSFKKRPLESETY-AGEGGNVTIFCNPEAAP 117
QC A N ++ + V++ L + + +S+ Y +G +V + C+ ++P
Sbjct: 327 QCDASNGHGGLLANINIMVMSESQGSLLDMTPRILTSDSQEYPVVQGVDVIMNCSAFSSP 386
Query: 118 KPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W + N G R +NG+L I ++DSG Y C A N G L V
Sbjct: 387 LPTISWFRGANQEAVKGERFFTLQNGSLQIIGAEKNDSGKYVCVALNTEGKAAVTAVLDV 446
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--WTHNGVRIGNMDLNELETP 234
P+ P + + QL C A ++ L +++ W +G ++ L+ E
Sbjct: 447 -KDPTRIVSGPRDAEVMSGATAQLICQAEYDKSLQDSFVLVWRKDG---DDIPLSVEENS 502
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK-T 293
+ +L I N + D+G Y C+ ++++ +++ + V P P V++ E+
Sbjct: 503 RYAVADSMLRIMNVALNDSGTYMCIARTSLDEMNATALLTVLDVPDAPLKVEISEIRSPR 562
Query: 294 SATIQWTDGATNGRPITHYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+ ++ W G+ + +T + + + W S + + V G + A+ + VL
Sbjct: 563 NISLSWVPGSDHNSSVTEFVVEFQESQWESGVWKKLQKVPGNQ---------ATADLVLH 613
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
+Y+F+V A N +G G P P+ + TP P + P I G + ISWE LP
Sbjct: 614 GDLSYKFRVYAINAVGPGPPGDPTETHKTPPAAPDRNPQDIKIQGHLPHQMDISWESLPV 673
Query: 413 EKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+QN P YK+ +R+ + +++ +K+ VVR S F YEVK+Q+ ND+
Sbjct: 674 TEQNGPGFEYKVSYRRLGVEDQWREHMVKQSS----FVVRNTSTF--VPYEVKIQSRNDI 727
Query: 472 GPGPESEVVT 481
G GPE +VVT
Sbjct: 728 GWGPEPKVVT 737
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 116/291 (39%), Gaps = 31/291 (10%)
Query: 20 TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79
+ W + GE L T ++ R I V E D Y C+AKN
Sbjct: 197 SLKWMKMGEKLPPRT-EFDNFGRLLILSEV-------EESDGGQYMCKAKNSAGEAVHYF 248
Query: 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII--GSGGRRK 137
+ V P + P + + G +V I C+ P +W+K+G + R+
Sbjct: 249 NVMVEGAPPEWLTGPPQDQLLV-IGSDVHIKCSVSGKPSSDIIWRKNGELFIDDPENNRR 307
Query: 138 IFENGNLLISPVSRDDSGIYSCTATNVHG----------MDESKGRLIVLHGPSYYEQLP 187
+ ++ +++ +D+ +Y C A+N HG M ES+G L+ + P
Sbjct: 308 VLDD-TVVLHNAGPEDTAVYQCDASNGHGGLLANINIMVMSESQGSLLDMT-PRILTSDS 365
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + ++ + CSA + L +++ N + L+ G L+I
Sbjct: 366 QEYPVVQGVDVIMNCSAFSSPLPTISWFRGANQEAVKGERFFTLQN-------GSLQIIG 418
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
A D+G+Y CV +T GK + + V+ P + G + EV + AT Q
Sbjct: 419 AEKNDSGKYVCVALNTEGKAAVTAVLDVKDPTRIVSGPRDAEV-MSGATAQ 468
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 124/513 (24%), Positives = 190/513 (37%), Gaps = 78/513 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
D+ C AF P T SWFR N E + E R+F N +++ + E+ D Y
Sbjct: 375 DVIMNCSAFSSPLPTISWFRGA---NQEAVKGE---RFFTLQNG-SLQIIGAEKNDSGKY 427
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFK--KRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
C A L T +A VL +K + P ++E +G + + + + FV
Sbjct: 428 VCVA---LNTEGKAAVTAVLDVKDPTRIVSGPRDAEVMSGATAQLICQAEYDKSLQDSFV 484
Query: 123 --WKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W+KDG+ I R + L I V+ +DSG Y C A + L VL
Sbjct: 485 LVWRKDGDDIPLSVEENSRYAVADSMLRIMNVALNDSGTYMCIARTSLDEMNATALLTVL 544
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P P K+ I+ R+ + +++ W ++ +E
Sbjct: 545 DVP----DAPLKVEISEIRSPR-----------NISLSWVPGSDHNSSVTEFVVEFQESQ 589
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-----IVEGPPGLPGGVQVVEVHK 292
+ G+ + + + V+ G +S K V + GPPG P E HK
Sbjct: 590 WESGVWKKLQKVPGNQATADLVLH---GDLSYKFRVYAINAVGPGPPGDP-----TETHK 641
Query: 293 TSATI---QWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVD-RYTGR 342
T D G I + N + VS +G E R
Sbjct: 642 TPPAAPDRNPQDIKIQGHLPHQMDISWESLPVTEQNGPGFEYKVSYRRLGVEDQWREHMV 701
Query: 343 KEASI----ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGG 395
K++S + VP YE K+ + N++G+G P P+ T D P AP +
Sbjct: 702 KQSSFVVRNTSTFVP---YEVKIQSRNDIGWG----PEPKVVTGYSGEDVPAAAPRDVAV 754
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK------KNDTEFQSETLKEYGNVGIAV 449
L +SW P+P YK+ W + N T Q ++L G A+
Sbjct: 755 EVFNTTVLRVSWTPVPPATVRGHLGGYKLHWSRLRSLLNPNRTLDQRQSLSFPGRRAQAM 814
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
V P ++EY + V N G GP S+ VT
Sbjct: 815 V--PGLEPFSEYRLTVSVYNKKGNGPNSDPVTF 845
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 109/277 (39%), Gaps = 56/277 (20%)
Query: 11 CEAFGVPDVTYSWFRNGELL---NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+A G P Y W ++GE + T + D F+ N I++ Y+C
Sbjct: 28 CDARGNPPPQYRWTKDGEDFVPPRATTTKTQHTDGSFVLHNKQFIQF------QGTYRCY 81
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE--AAPKPKFVWKK 125
A N+L T + ++ P F K E EG +T+ C+P A P+ +
Sbjct: 82 AFNKLGTAMTKEITLIVPTVPKFPKVG-EPPIAVDEGDPITLHCHPPEGAVPRQLYWMSL 140
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATNVHGMDESKGRLIVLHGPSYYE 184
D +I R + +GNL S ++DS + Y C A K R IV +
Sbjct: 141 DLQLIQQDERVSMGTDGNLYFSHALQNDSRLDYYCNAAF------PKLRTIV-------Q 187
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID--GGL 242
++P +T+ R+L+ W M + E P D G L
Sbjct: 188 KMPMAVTV---RSLK----------------W---------MKMGEKLPPRTEFDNFGRL 219
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
L ++ +D G+Y C K++ G+ V+VEG P
Sbjct: 220 LILSEVEESDGGQYMCKAKNSAGEAVHYFNVMVEGAP 256
>gi|348558216|ref|XP_003464914.1| PREDICTED: protein sidekick-2 [Cavia porcellus]
Length = 2159
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 206/485 (42%), Gaps = 41/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 317 CRAKGVPPPSITWYKDAAVVEVEKLARFRQR----GDGGLQISGLVPD-DTGMFQCFARN 371
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 372 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 429
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 430 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITRP 488
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + Y+W +G + P I +D G L I
Sbjct: 489 PQDQSVIKGTQASMVCGVTHDPRVTIRYVWEKDGATLATES-----NPRIRLDKNGSLHI 543
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
T D G Y C V S G S + V P P + + + + W
Sbjct: 544 TQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTTERRAINLTWAKPF 603
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKV 361
P+ Y + N N+ W + V EA+ V LVP +Y+F++
Sbjct: 604 DGNSPLIRYVLEMSEN-NAPWTTLLASV----------DPEATSVMVKGLVPARSYQFRL 652
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 653 CAVNDVGRGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKG 712
Query: 422 YKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 713 YIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSS 767
Query: 479 VVTIW 483
VT W
Sbjct: 768 KVTEW 772
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 139/382 (36%), Gaps = 58/382 (15%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 31 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 78
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAA--PKPKFVW 123
+N R + R ++ ++ E E Y G + P A P+P+ W
Sbjct: 79 VVRN----RMGALLQRQTEVQVAYMGNFEEGEKYQSVSHGEAAVIRAPRIASFPRPQVTW 134
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----- 178
+DG I R I L+I D+G Y A N D + I L
Sbjct: 135 FRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVG 194
Query: 179 GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNE 230
GP+ I +A + + C A+ L+ + IW +GV++ G D N
Sbjct: 195 GPADPIAPTIIIPPKNTSVVAGTSEVIMECVANARPLIKLHIIWKKDGVQVSSGLSDYNR 254
Query: 231 LETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L I + + +DAG YEC + S+V + + V PP V+
Sbjct: 255 -----------RLTIPSPTVSDAGYYECEAVLRSSSVAPVVRGAHLSVLEPPQF---VKE 300
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
E H T+ + D + + I TW+ + V +++ R+ R + +
Sbjct: 301 PERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAAVVEVEKLARFRQRGDGGL 352
Query: 348 E-NVLVPWSTYEFKVIAGNELG 368
+ + LVP T F+ A N G
Sbjct: 353 QISGLVPDDTGMFQCFARNAAG 374
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 934 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 990
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 991 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGMVGEGEEWLLI--HQLSNEPDA----RSME 1044
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1045 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1103
Query: 407 WEPLPREKQNAP--NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + + R+ E+ +
Sbjct: 1104 WMPLPEMEYNGSPESVGYKI---KYSRSDGHGKTLSH-----VVLDRVEREYTIEDLEEW 1155
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
EY V+VQA N +G GP S VV
Sbjct: 1156 MEYRVQVQAFNAIGSGPWSPVV 1177
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L R+ + ++ + D Y C A N
Sbjct: 410 CETSGAPRPAITWQKGERILASGSVQLP---RFTLLESGSLLISPTHISDAGTYTCLATN 466
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V + RP + ++ +G ++ C P+ ++VW+KDG
Sbjct: 467 SRGVDEASADLVVWAR--TRITRPPQDQSVI-KGTQASMVCGVTHDPRVTIRYVWEKDGA 523
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ S R ++ +NG+L I+ D G Y+C + G D L V P E
Sbjct: 524 TLATESNPRIRLDKNGSLHITQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHP 583
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + Y+ ++++E P ++D
Sbjct: 584 VATLSTTERRAINLTWAKPFDGNSPLIRYV----------LEMSENNAPWTTLLASVDPE 633
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+ A Y+ C V + K + + ++ E P P V S
Sbjct: 634 ATSVMVKGLVPARSYQFRLCAVNDVGRGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 693
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 694 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 742
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 743 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 801
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 802 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 861
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 862 TTPGDGPRS 870
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1819 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1875
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1876 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1909
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + G L ++WEP P + QN
Sbjct: 1582 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPRNVVVHGTTATQLDVTWEPPPLDSQN 1640
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1641 GNIQGYKIYFWEAQRQNLTERVKTLFLAENG------VKLKNLTGYTAYMVTVAAFNAAG 1694
Query: 473 PGPESEVV 480
GP S V
Sbjct: 1695 DGPRSTPV 1702
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1079 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGSPESVGYKIKYSRSDGHGKTLS-- 1136
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W Y +V A N +G G P SP T P
Sbjct: 1137 -HVVLDRVER-----EYTIED-LEEWMEYRVQVQAFNAIGSG-PWSPVVLGRTRESVPSS 1188
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1189 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVRYKEK-DSDSQPHFWLVEGNASRS 1247
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
V++ Y YEV+V A +G G S
Sbjct: 1248 -VQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1276
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +V+ +
Sbjct: 1389 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVNHNTSS 1447
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1448 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTVL 1495
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1496 SVTPHTTTSVLIRWQPPAEDKVNGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1555
Query: 454 SEFYYTE-------------------YEVKVQAINDVGPGPES 477
S + YE+++ N VG GP S
Sbjct: 1556 SLYSMRNLSRPSLTQYELDNLNKHRWYEIRMSVYNAVGEGPLS 1598
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 76/196 (38%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1288 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNATAANTAAVE-VLAPSARQ 1346
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1347 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1398
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1399 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVNHNTSSFTVDRLKPF 1456
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1457 --TSYKFRVKATNDIG 1470
>gi|297681291|ref|XP_002818391.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Pongo abelii]
Length = 1183
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 206/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNDYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCVA 336
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEP 447
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 168 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 228 ISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 287
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+I + S AD+G Y+CV K+
Sbjct: 288 A--EGLPTPIIYWAKED---GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCVAKNA 339
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 340 LGAIHHTISVRVKAAP 355
>gi|345797904|ref|XP_856244.2| PREDICTED: neurofascin isoform 8 [Canis lupus familiaris]
Length = 1236
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 525 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 636 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
I L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+
Sbjct: 689 ILQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + N + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNATVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE + V
Sbjct: 801 VQAENDFGKGPEPDTV 816
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---KSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAHR-----NLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGTDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + ++ L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGTDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|354466539|ref|XP_003495731.1| PREDICTED: protein sidekick-2 isoform 2 [Cricetulus griseus]
Length = 2053
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 211/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ L+ E L Q D L I L P+ D M QC A N
Sbjct: 234 CRAKGVPPPSITWYKDAALVEVEKLTRFKQR----NDGGLQISGLLPD-DTGMLQCFAHN 288
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 289 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 346
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 347 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 405
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 406 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 459
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + + + + W
Sbjct: 460 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTWAKP 519
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y I+ + N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 520 FDGNSPLMRY-ILEMSENNAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFR 568
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 569 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 628
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 629 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 683
Query: 478 EVVTIW 483
VT W
Sbjct: 684 SKVTEW 689
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 111/280 (39%), Gaps = 27/280 (9%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDP 61
+++T C A P + W ++G LL++ + D +R LTI NP D
Sbjct: 135 SEVTMECVANARPLIKLHIIWRKDGALLSNG---ISDYNRR------LTI--TNPTLSDA 183
Query: 62 AMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A + + A L VL P F K P E A V I C + P
Sbjct: 184 GYYECEAVLRSSSVSPVTRGAYLSVLE-PPQFVKEP-ERHITAEMEKVVDIPCRAKGVPP 241
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KD + + R K +G L IS + DD+G+ C A N G ++ L V
Sbjct: 242 PSITWYKDAALVEVEKLTRFKQRNDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAV 301
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P T+ ++ L C T A W G RI + ++ P
Sbjct: 302 TSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRF 356
Query: 237 N-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 357 TLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 396
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1306 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1364
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1365 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1412
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1413 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1472
Query: 454 SEFYYTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1473 YLSKHKRYEIRMSVYNAVGEGPLS 1496
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 105/273 (38%), Gaps = 35/273 (12%)
Query: 117 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P+P+ W +DG I R I L+I D+G Y A N D + I
Sbjct: 45 PRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 104
Query: 177 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
L GP+ I +A + + C A+ L+ + IW +G + N
Sbjct: 105 LAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALLSN 164
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLP 282
I+ L ITN + +DAG YEC + S+V ++ + V PP
Sbjct: 165 ---------GISDYNRRLTITNPTLSDAGYYECEAVLRSSSVSPVTRGAYLSVLEPPQF- 214
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
V+ E H T+ + D + + I TW+ + V +++ R+ R
Sbjct: 215 --VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVEKLTRFKQR 264
Query: 343 KEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 374
+ ++ + L+P T + A N G + S+
Sbjct: 265 NDGGLQISGLLPDDTGMLQCFAHNAAGEAQTST 297
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1717 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1773
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1774 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1807
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 41/266 (15%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 851 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 907
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE-----VDRYTGRKE 344
+ S T+Q+ G I+ + + A+ VIG+ + + + +
Sbjct: 908 IGPRSVTLQFRPGYDGKTSISRWVVEAQVG-----------VIGEGEEWLLIYQLSNEPD 956
Query: 345 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
A V L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 957 ARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETS 1016
Query: 403 LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 457
L + W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1017 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIED 1068
Query: 458 ---YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1069 LEEWTEYRVQVQAFNAIGSGPWSQAV 1094
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1480 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQN 1538
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V + A N G
Sbjct: 1539 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSIAAFNAAGD 1593
Query: 474 GPES 477
GP S
Sbjct: 1594 GPRS 1597
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 1205 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1263
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
Y + L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1264 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1315
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1316 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1373
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1374 --TSYKFRVKATNDIG 1387
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 996 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1053
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1054 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVMGRTRESVPSS 1105
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1106 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1164
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1165 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1193
>gi|213982987|ref|NP_001135654.1| neuronal cell adhesion molecule precursor [Xenopus (Silurana)
tropicalis]
gi|197246560|gb|AAI68554.1| Unknown (protein for MGC:184780) [Xenopus (Silurana) tropicalis]
Length = 1294
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 218/515 (42%), Gaps = 56/515 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D + TC A G P + +W NG ++ E P D R D ++ + + A+YQ
Sbjct: 353 DGSLTCRASGSPTPSITWLING--VSIELAPT-DASRRVDGDTIMFSKVQDGAT--AVYQ 407
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWK 124
C A N+ ++A + V+ P + Y NV + C +PKP+ W
Sbjct: 408 CNASNKYGYLLANAFVNVIAEPPRIM---MSKHVYKVIANNVALLHCPFFGSPKPEIKWF 464
Query: 125 KDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K + G +F +NG L I +D SG Y+C ATN G + L + P+
Sbjct: 465 KGAHGSVLHGNGYVFHDNGTLEIPVAQKDSSGNYTCVATNSFGSVKDMIGLQI-KDPTMI 523
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ P I + + C + L IW + + N + + G L
Sbjct: 524 IKQPEYRVIQRYGSAHFECRVKHDPTLKPVVIWLKDDTELPNDE-------RFKVTKGHL 576
Query: 244 EITNASFADAGEYECVVKSTVGKIS----------TKTTVIVEGPPGLPGGVQVVEVHKT 293
I N + D G Y CV + + +S T T I P P +++ + +
Sbjct: 577 TIKNVTEKDEGTYTCVANTDLDTVSASAVLTVVEATPTPAIFYDRPDHPFDLELTDHLER 636
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
S + W G N PIT++ I + TW H + K +G + + N L
Sbjct: 637 SVQLSWVPGDDNNSPITNFIIEYEDTMHDPGTW-----HFLTK----VSGTQTTARLN-L 686
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+VIA NE G EPS S QY T +P + PS + G G + +L I+WE +
Sbjct: 687 SPFVNYSFRVIAVNEFGRSEPSESSEQYMTKPAEPDKNPSGVKGVGTEPDNLVIAWESIK 746
Query: 412 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
N P + YK+ WR+K+ D E+ S + NV +V F YE+KVQA+ND
Sbjct: 747 GFDSNGPGLQYKVSWRQKDFDDEWTSIIV---ANVSKYIVSGTPTF--EPYEIKVQALND 801
Query: 471 VGPGPESEVVTIWHDPLVIISYVCQGDLKLCLPRD 505
+G P DP V+I Y + DL + P +
Sbjct: 802 IGYAP---------DPSVVIGYSGE-DLPMTAPSN 826
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 36/300 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNP 57
+D + + CEA G P ++SW RNG + D+D Y L I +N
Sbjct: 53 VDPRESIVIQCEAKGKPPPSFSWTRNGTHFDI------DKDPYVTMKQNSGTLVINTMNG 106
Query: 58 ERDPAM---YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 114
R A YQC A+N + S+ + + P + K +E +G + + CNP
Sbjct: 107 ARVEAYEGEYQCTARNDRGSALSNNIVVRQSRSPLWTKEKIEP-IVIQQGVPLVLPCNPP 165
Query: 115 AAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTAT-NVHGMDES 170
P ++ D + +++ + NG+L S V +D+ Y C A N+
Sbjct: 166 KGLPPPIIFWMDNSFQKLPQNKRVSQGLNGDLYFSNVQPEDTRDFYICYARFNLTQTIHQ 225
Query: 171 KG--RLIVLHGPSYYEQLPPKI---------TIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
K L VL E+ P + T+ L L C A E L W
Sbjct: 226 KQPISLKVLSNSPAGERRPSMLFPNNTTSNKTVLLGEVLLLECIA--EGLPTPEIHWRKE 283
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ N + N N L+I + + ADAG+Y+C+ ++ +G TV V+ P
Sbjct: 284 S---ADLPANRVFYENFN---KTLKIIDVTEADAGKYKCIGRNILGTTHHIITVTVKAAP 337
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 182/503 (36%), Gaps = 74/503 (14%)
Query: 11 CEAFGVPDVTYSWFR--NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA-MYQCR 67
C FG P WF+ +G +L+ + Y DN T+ ++D + Y C
Sbjct: 451 CPFFGSPKPEIKWFKGAHGSVLHG--------NGYVFHDNG-TLEIPVAQKDSSGNYTCV 501
Query: 68 AKNQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPK 120
A N + L++ + +P ++ G+ C + P KP
Sbjct: 502 ATNSFGSVKDMIGLQIKDPTMIIKQPEYR--------VIQRYGSAHFECRVKHDPTLKPV 553
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA-TNVHGMDESKGRLIVLHG 179
+W KD + + R K+ + G+L I V+ D G Y+C A T++ + S +V
Sbjct: 554 VIWLKDDTELPNDERFKVTK-GHLTIKNVTEKDEGTYTCVANTDLDTVSASAVLTVVEAT 612
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPN--- 235
P+ P L + H E + ++++ N I N + +T +
Sbjct: 613 PT-----PAIFYDRPDHPFDLELTDHLERSVQLSWVPGDDNNSPITNFIIEYEDTMHDPG 667
Query: 236 -----INIDG-------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283
+ G L N SF E +S + S + P P
Sbjct: 668 TWHFLTKVSGTQTTARLNLSPFVNYSFRVIAVNE-FGRSEPSESSEQYMTKPAEPDKNPS 726
Query: 284 GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIART-NWNSTWFNVSEHVIGKEVDRYT 340
GV+ V + I W G + P YK+ R +++ W ++ I V +Y
Sbjct: 727 GVKGVGTEPDNLVIAWESIKGFDSNGPGLQYKVSWRQKDFDDEWTSI----IVANVSKYI 782
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
+ E YE KV A N++GY S Y+ D P APS +
Sbjct: 783 VSGTPTFE-------PYEIKVQALNDIGYAPDPSVVIGYSG-EDLPMTAPSNVELEVINN 834
Query: 401 GDLSISWEPLPREKQNAPNIYYKIF-WR-----KKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ W+ +P Y+++ W+ K+N + L +GN + +P
Sbjct: 835 TLAKVQWDSVPSTSIRGHLQGYRVYYWKAENHTKRNKRHMEKRMLTFHGNKTHGM--LPG 892
Query: 455 EFYYTEYEVKVQAINDVGPGPES 477
YT Y + V+ N G GP S
Sbjct: 893 LEPYTSYILNVRVFNGKGEGPPS 915
>gi|410964137|ref|XP_003988612.1| PREDICTED: contactin-1 isoform 3 [Felis catus]
gi|410964139|ref|XP_003988613.1| PREDICTED: contactin-1 isoform 4 [Felis catus]
Length = 627
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 18/278 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G + G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ +IW+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G L I NA AG Y C ++ V S ++V G
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G Y C A N G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGTYECEAENNRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 118/322 (36%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W N ++ + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS------DRYSMVGGNLVINNPDKQKDAGI 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 112 YYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D+ + +
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMP----- 283
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 284 ----STAEISTSGAVLKIFNIQLEDEGTYECEAENNRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCVAT-GKPI 359
>gi|345307130|ref|XP_001507406.2| PREDICTED: neurofascin [Ornithorhynchus anatinus]
Length = 1371
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 225/500 (45%), Gaps = 71/500 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD-----PAMYQ 65
C A G P T W NGE L + + + R D V+ RD A+YQ
Sbjct: 551 CRANGNPKPTVQWLVNGEPLEAAS---PNPSREVAGDTVIF-------RDTQIGSSAVYQ 600
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPS--FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
C A N+ ++A + VL + P F + L + + C +P P W
Sbjct: 601 CNASNEHGYLLANAFVSVLDVPPRMLFPRNQLIKVIHLNR---TRLDCPFFGSPIPTLRW 657
Query: 124 KKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K+G GS GG ++FENG+L I+ ++D GIY+C ATN+ G E++ RL V P
Sbjct: 658 FKNGQ--GSNLDGGNYRVFENGSLEITMTRKEDQGIYTCVATNILGKAENQVRLEV-KDP 714
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINI 238
+ Q+P ++L C + L ++ W + + IGN E E
Sbjct: 715 TRIVQVPEDQMAKKGATVRLECHVKHDPSLKLSIKWLKDNEPLYIGNRLKKEDEA----- 769
Query: 239 DGGLLEITNASFADAGEYEC---------VVKSTVGKISTKT------TVIVEGPPGLPG 283
L I + D G Y C V K+ + ++T++ V+ + P P
Sbjct: 770 ----LTILGVAERDEGLYACEASTELDRAVAKAYLTVLATQSVPTNRMAVLPKERPERPR 825
Query: 284 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTG 341
+++ ++ + S + W G N PIT Y + + W N+S +++G
Sbjct: 826 DLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDQFQPGRWHNLS---------KFSG 876
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+++ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G +
Sbjct: 877 SINSAVLK-LSPYVNYQFRVIAINEVGSSLPSLPSERYRTSGAPPEANPSDVQGVGSRKN 935
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTE 460
++ ISW P+ + PN+ Y + WR+++ E + + T+K GN + V + P Y
Sbjct: 936 NMEISWTPMNATQAYGPNLRYIVKWRRRDTRESWSNATVK--GNRYV-VWQTP---VYVP 989
Query: 461 YEVKVQAINDVGPGPESEVV 480
Y+++VQ+ ND G GP+ + +
Sbjct: 990 YDIRVQSENDFGKGPDPDTI 1009
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 121/300 (40%), Gaps = 36/300 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN + N P R + L I + + P
Sbjct: 246 VDPRDNIFIECEAKGNPFPSFLWTRNSKFFNIAKDPRVTMQR---RSGTLVIDFRSGGRP 302
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N L T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 303 EEYEGEYQCSARNNLGTALSNKIRLQVSKSPLWPKESLDP-VVVQEGNPLTLQCNPPPGL 361
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA----------TNV 164
P P W + I R +NG+L S V D+ YSC A N
Sbjct: 362 PSPVIFWMSSSMDPIVQDKRVSQGQNGDLYFSNVMLQDTQTDYSCNARFHFTHTIQQKNP 421
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHR-----NLQLRCSAHTEELLDVAYIWTHN 219
+ R + PS+ + P+ T ++ +L L C A D+A W
Sbjct: 422 FTLKVLTTRGVAERTPSF---MHPQGTSSSQMVLRGTDLLLECIASGVPAPDIA--WHKK 476
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G G++ +++ N N L I N S D+GEY C+ + +G I +V V+ P
Sbjct: 477 G---GDLPAGKVKFENFN---KALRIINVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 530
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFKK-RPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 404 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMHPQGTSSSQMVLRGTDLLLECIA 463
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + +G + FEN N L I VS +DSG Y C A+N G
Sbjct: 464 SGVPAPDIAWHKKGGDLPAGKVK--FENFNKALRIINVSEEDSGEYFCLASNKMGSIRHT 521
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + ++ C A+ V W NG + N
Sbjct: 522 ISVRVKAAP-YWLDEPKNLILAPGEDGRVVCRANGNPKPTVQ--WLVNGEPLEAASPN-- 576
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 577 --PSREVAGDTVIFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRM 625
>gi|403294840|ref|XP_003938371.1| PREDICTED: neurofascin [Saimiri boliviensis boliviensis]
Length = 1316
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 209/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 435 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 485
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 486 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 544
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 545 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 601
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P + L C + L + W + + IGN E ++
Sbjct: 602 YRMPEDQVAKRGTTVHLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 653
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 654 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 712
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + +Y G ++
Sbjct: 713 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSA 765
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+
Sbjct: 766 VLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEIT 824
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 825 WTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIR 877
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 878 VQAENDFGKGPEPESV 893
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 130 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 186
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 187 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 245
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 246 PSPVIFWMSSSMEPIAQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 305
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 306 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 361
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 362 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 414
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 340 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 392
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 393 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 449
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 450 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 503
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 504 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 557
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 558 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 598
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 288 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 347
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 348 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 405
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 406 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 460
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 461 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 509
>gi|344277014|ref|XP_003410300.1| PREDICTED: neurofascin-like isoform 1 [Loxodonta africana]
Length = 1189
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 208/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 369 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 420
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 421 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNG 479
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ L V P+
Sbjct: 480 Q--GSNLDGGNYHVYENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEV-KDPTRIY 536
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
Q+P + +QL C + L + W + + +GN E ++
Sbjct: 537 QMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGNRMKKEDDS--------- 587
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y C+ + + + K + V +G P P +++
Sbjct: 588 LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNRLALLPKGRPDRPRDLEL 647
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 648 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 700
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+W
Sbjct: 701 LQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNPADVKGEGTRKNNMEITW 759
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + NV + R + Y YE++V
Sbjct: 760 TPMNATSAFGPNLRYIVKWRRR-------ETRDTWNNVTVWGSRYVVGQTPVYVPYEIRV 812
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 813 QAENDFGKGPEPDTV 827
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGMDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSHKAKFENFN---KALRITNISEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ N+ E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSHKAKFENFNKALRITNI-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEVKDP 532
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ +S +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPS--HKAKFENFNKALRITNISEEDSGEYFCLA 329
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 281 L 281
+
Sbjct: 443 M 443
>gi|344277018|ref|XP_003410302.1| PREDICTED: neurofascin-like isoform 3 [Loxodonta africana]
Length = 1239
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLMRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ L V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDKGIYTCVATNILGKAENQVHLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
Q+P + +QL C + L + W + + +GN E ++
Sbjct: 525 YQMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNRLALLPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 636 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I+
Sbjct: 689 VLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNPADVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + NV + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETRDTWNNVTVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE + V
Sbjct: 801 VQAENDFGKGPEPDTV 816
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGEPCPSFHWTRNSRFFNVAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSHKAKFENFN---KALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ +S +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPS--HKAKFENFNKALRITNISEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|431892899|gb|ELK03327.1| Neurofascin [Pteropus alecto]
Length = 1270
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 211/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 342 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 392
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 393 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 451
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 452 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 508
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IG+ E ++
Sbjct: 509 YRMPEDQVTKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGSRMKKEDDS-------- 560
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 561 -LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQTTPTNRLAALPKGRPDRPRDLE 619
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 620 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 672
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 673 VLQ-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 731
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 732 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 784
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE + V
Sbjct: 785 VQAENDFGKGPEPDTV 800
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 120/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 37 VDPRDNILIECEAQGNPAPSFHWTRNSRFFNVAKDPRVSMRR---RSGTLVIDFRSGGRP 93
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 94 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 152
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVS-RDDSGIYSCTAT--NVHGMDESKG 172
P P W I R NG+L S V +D YSC A H + +
Sbjct: 153 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMVQDMQTDYSCNARFHFTHTIQQKNP 212
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 213 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 268
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 269 -GDLPSDKAKFENFN---KALRITNISEEDSGEYFCLASNKMGSIRHTISVRVKAAP 321
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ N+ E D Y
Sbjct: 247 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNI-------SEEDSGEYF 299
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 300 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPTVQWMV 356
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 357 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 410
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 411 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 464
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 465 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 505
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 195 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 254
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ +S +DSG Y C A+N G
Sbjct: 255 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNISEEDSGEYFCLASNKMGSIRHT 312
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 313 ISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 367
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 368 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 416
>gi|241631838|ref|XP_002410294.1| neuronal cell adhesion molecule, putative [Ixodes scapularis]
gi|215503376|gb|EEC12870.1| neuronal cell adhesion molecule, putative [Ixodes scapularis]
Length = 1224
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 209/473 (44%), Gaps = 55/473 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+ +++ C A G+P+ WF NG L N+E P R ++ +LT+ L +RD A
Sbjct: 344 EESVSFECSASGIPEPKLQWFVNGVPLQNAEANP-----RRKVEGPLLTLESLT-KRDTA 397
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC A N + L VL L PS + P E T A T+ C AP+P+
Sbjct: 398 VYQCNASNPHGYAFKDFYLNVLALPPSIVEAP-EPLTLAVVTSRATLRCRVFGAPRPEVK 456
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
W K+ + +GGR K+ ++G+L I + D G Y+C A+N G + G L V
Sbjct: 457 WMKETQEL-TGGRYKVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGALEV------ 509
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
++ ++ R +A + L++ W NG + + + +
Sbjct: 510 -----KELRGGGGQSATFRYNAEADPSLELRISWLFNGELVDP----DADARMVQASDNS 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L IT D+G Y C+ ++ + + T+ V+ P P V+V E A ++W
Sbjct: 561 LTITRTIELDSGVYTCLAQTDLDGDKAQATLTVQDVPNPPQMVRV-ECDTLMALVEWKPT 619
Query: 303 ATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
PI Y I T+++ TW + ++ + + + PW+ Y F+V
Sbjct: 620 GDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT---------KFKVSMSPWANYTFRV 670
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+A N++G PS S + TP D P++ P ++ P+P +QNAP +
Sbjct: 671 VARNKIGPSLPSGASSRCTTPEDVPHKNPDKV---------------PMPPIEQNAPGFF 715
Query: 422 YKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YK+FW++ + D + S+ + ++ P+ + Y +KV+A N G
Sbjct: 716 YKVFWKRNDLPDAAWNSKIIDDWKQNRHVEYGQPT---FKPYRIKVEAHNRRG 765
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 113/294 (38%), Gaps = 41/294 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
CEA G P+ Y W +N N+E + R Q T+ + P+ D +YQC A
Sbjct: 53 CEAQGNPEPEYKWTKN----NNEFDYVSYDKRISQQPRRGTLIFTKPDDVDEGLYQCFAS 108
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDGN 128
N T S++ + SF + + E Y EG +++ CNP P+P W
Sbjct: 109 NLHGTSVSNSVFLRKSELNSFAEESTK-EVYVVEGDPLSLDCNPPTGYPRPNIFWLIQ-- 165
Query: 129 IIGSGGRRKIFEN-------GNLLISPVSRDDS---GIYSCTATNVHGMDESKGRLIVL- 177
SG R + + G+L S V R D+ +Y+C+AT+V + G I L
Sbjct: 166 -YSSGALRNVNSSRITADPEGDLHFSRVERGDALADAVYTCSATSVFRREYKIGNKIQLR 224
Query: 178 -----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
H P PP + + L+L C L ++ W+ G +
Sbjct: 225 VEPVSSAGKAEHAPIKQYLSPPNLVALKGQELKLYCIFGGSPLPQIS--WSKRGSSAASS 282
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGPP 279
G LEI + F D G YEC + VG S V VE P
Sbjct: 283 RFTYTNY------GKTLEIRSVGFEDEGTYECQANNGVGVAQSHAMNVKVESAP 330
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 16/207 (7%)
Query: 62 AMYQCRAKNQLKTRY---SSAQLRVLTLKPSFKKRPLESETY-------AGEGGNVTIFC 111
A+Y C A + + Y + QLRV + + K + Y A +G + ++C
Sbjct: 201 AVYTCSATSVFRREYKIGNKIQLRVEPVSSAGKAEHAPIKQYLSPPNLVALKGQELKLYC 260
Query: 112 NPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+P P+ W K G+ S L I V +D G Y C A N G+ +S
Sbjct: 261 IFGGSPLPQISWSKRGSSAASSRFTYTNYGKTLEIRSVGFEDEGTYECQANNGVGVAQSH 320
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ + Y+ + P A ++ CSA + + W NGV + N + N
Sbjct: 321 AMNVKVESAPYWLRSPENTNAAEEESVSFECSASG--IPEPKLQWFVNGVPLQNAEAN-- 376
Query: 232 ETPNINIDGGLLEITNASFADAGEYEC 258
P ++G LL + + + D Y+C
Sbjct: 377 --PRRKVEGPLLTLESLTKRDTAVYQC 401
>gi|444706383|gb|ELW47725.1| Neurofascin [Tupaia chinensis]
Length = 1333
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 209/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 352 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 402
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 403 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 461
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 462 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 518
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L ++ W + + I N E ++
Sbjct: 519 YRMPEDQVAKRGTTVQLECRVKHDPSLKLSISWLKDDGPLYISNRMKKEEDS-------- 570
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 571 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 629
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 630 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 682
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
I L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 683 ILQ-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 741
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + N + R + Y YE++
Sbjct: 742 WTPMNATSAFGPNLRYIVKWRRR-------ETRDTWNNATVWGSRYVVGQTPVYVPYEIR 794
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 795 VQAENDFGKGPEPETV 810
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 223 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 278
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G +V V+ P
Sbjct: 279 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSTRHTISVRVKAAP 331
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 257 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 310 CLASNKMGSTRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 366
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 367 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 421 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 474
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 475 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 515
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 205 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 265 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSTRHT 322
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 323 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 377
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 378 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 426
>gi|348552758|ref|XP_003462194.1| PREDICTED: neural cell adhesion molecule L1-like isoform 1 [Cavia
porcellus]
Length = 1256
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 206/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P +W NG + L+ +Y I L + + P D + QC A+N
Sbjct: 353 CQAQGRPQPEITWRINGNRMEE----LDKDQKYQIHRGALILSNVQP-GDTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT-IFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L K ++++TY G G + C AP P W ++G
Sbjct: 408 RHGHLLANAYIYVVQLPA--KILTVDNQTYMGVAGRTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQ 185
+ R + NG L I + +D+G Y C A N D++ ++ + + Q
Sbjct: 466 TVLRDERFFPYANGTLAIRDLQANDTGRYFCQAAN----DQNNATIVANLQVKEATQITQ 521
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLE 244
P + C A + L + W +G DL EL ++ ID G L
Sbjct: 522 GPREAIEKKGSRATFTCQASFDPSLRPSLTWRGDG-----RDLQELGDSDKYFIDDGRLV 576
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTD 301
I N + D G Y CV + + ++ + ++V G PG V+V E H + + WT
Sbjct: 577 IDNLEYGDQGNYSCVASTELDEVEARAQLLVVGSPGPVPHVEVSERHLLKHSQVHLSWTP 636
Query: 302 GATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ I Y I +A W H +GK + S L P+
Sbjct: 637 AEDHNAAIEKYDIEFEDKEMAPEKW---------HSLGK-----VPGNQTSTTLKLSPYV 682
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y F+V A N+ G GEPS PS TP P + P + G G + ++ I+W+PL
Sbjct: 683 HYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDW 742
Query: 416 NAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + +Q +T+ + VV S F YE+KVQA+N G G
Sbjct: 743 NAPQVQYRVQWRPQGTQGPWQEQTVSD----SFLVVTNTSTF--EPYEIKVQAVNSQGKG 796
Query: 475 PESEVV 480
PE +V
Sbjct: 797 PEPQVT 802
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 115/290 (39%), Gaps = 43/290 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W LL S +P DR Q++ T++ L+ E+D Y
Sbjct: 259 LVLECIAEGFPTPTIKW-----LLPSGPMPA---DRITYQNHNKTLQLLSVGEQDDGEYH 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L T + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGTARHVYYVTV-EAAPDWLHKP-KSGLY-GPGETARLDCQAQGRPQPEITWRI 367
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+GN + + + ++ G L++S V D+ + C A N HG ++ + Y
Sbjct: 368 NGNRMEELDKDQKYQIHRGALILSNVQPGDTMVTQCEARNRHGH-------LLANAYIYV 420
Query: 184 EQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A R L C A + V ++ G + +E P
Sbjct: 421 VQLPAKILTVDNQTYMGVAGRTAYLLCKAFGAPVPSVQWL-DEEGTTVLR---DERFFPY 476
Query: 236 INIDGGLLEITNASFADAGEYECVV------KSTVGKISTK-TTVIVEGP 278
N G L I + D G Y C + V + K T I +GP
Sbjct: 477 AN---GTLAIRDLQANDTGRYFCQAANDQNNATIVANLQVKEATQITQGP 523
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P+V + W ++G SE L + + +T +R +Y
Sbjct: 52 DISLKCEARGKPEVQFRWMKDGVHFRPSEELGVTVHETPHSGSFTITGNNSFAQRFQGVY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A NQL T S + P + K ++ E +V + CNP + +P ++
Sbjct: 112 RCFASNQLGTAMSHEIQLMAEGAPKWPKEMVKPVEVE-ERESVVLPCNPPPSAEPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------TN 163
+ I I R + +NGNL + V DS Y C A
Sbjct: 171 MNSKILHIKQDERVSMGQNGNLYFANVLISDSHSDYICNAHFPGTRTIIQKEPIDLRVKA 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S + + + L L C A + ++ +
Sbjct: 231 TNTMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWL-----LPS 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ + D GEY C+ ++++G V VE P
Sbjct: 280 GPMPADRITYQNHN---KTLQLLSVGEQDDGEYHCLAENSLGTARHVYYVTVEAAP 332
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG---NMDLNELE 232
V+ P EQ PP++ + ++ L+C A + +V + W +GV + + E
Sbjct: 31 VMEPPVITEQSPPRLVVFPTDDISLKCEARGKP--EVQFRWMKDGVHFRPSEELGVTVHE 88
Query: 233 TPNINIDGGLLEITNASFAD--AGEYECVVKSTVG-KISTKTTVIVEGPPGLP 282
TP+ G N SFA G Y C + +G +S + ++ EG P P
Sbjct: 89 TPH---SGSFTITGNNSFAQRFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWP 138
>gi|345797906|ref|XP_545682.3| PREDICTED: neurofascin isoform 1 [Canis lupus familiaris]
Length = 1189
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 209/500 (41%), Gaps = 61/500 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NGE L S + D +D ++ R A
Sbjct: 364 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 415
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 416 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 474
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 475 WFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 531
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 532 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 587
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLP 282
L I + D G Y CV + + + K + V +G P P
Sbjct: 588 -----LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRP 642
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + F + + ++ G
Sbjct: 643 RDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGS 695
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
++I L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + +
Sbjct: 696 VNSAILQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNN 754
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTE 460
+ I+W P+ PN+ Y + WR++ ET + + N + R + Y
Sbjct: 755 MEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNATVWGSRYVVGQTPVYVP 807
Query: 461 YEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE + V
Sbjct: 808 YEIRVQAENDFGKGPEPDTV 827
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---KSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNA 222
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAHR-----NLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSF---MYPQGTASSQMVLRGTDLLLEC 279
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 280 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 331
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 332 KMGSIRHTISVRVKAAP 348
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 274 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 326
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 327 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 383
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 384 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 437
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ + RN +R + LD + W NG + N+D
Sbjct: 438 -DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 491
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 492 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 532
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 93/248 (37%), Gaps = 35/248 (14%)
Query: 46 QDNVLTIRYL--NPERD------PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFK-KRPLE 96
Q N T++ L NP D P MY R V PSF +
Sbjct: 219 QKNAFTLKVLTNNPYNDSSLRNHPDMYSARG--------------VAERTPSFMYPQGTA 264
Query: 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDS 154
S G ++ + C P P W K G + S + FEN N L I+ VS +DS
Sbjct: 265 SSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDS 322
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A+N G + V P Y+ P + +A + +L C A+ V
Sbjct: 323 GEYFCLASNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ- 380
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV- 273
W NG + + N PN + G + + + Y+C + G + V
Sbjct: 381 -WMVNGEPLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVS 435
Query: 274 IVEGPPGL 281
+++ PP +
Sbjct: 436 VLDVPPRM 443
>gi|348552760|ref|XP_003462195.1| PREDICTED: neural cell adhesion molecule L1-like isoform 2 [Cavia
porcellus]
Length = 1252
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 206/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P +W NG + L+ +Y I L + + P D + QC A+N
Sbjct: 353 CQAQGRPQPEITWRINGNRMEE----LDKDQKYQIHRGALILSNVQP-GDTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT-IFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L K ++++TY G G + C AP P W ++G
Sbjct: 408 RHGHLLANAYIYVVQLPA--KILTVDNQTYMGVAGRTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQ 185
+ R + NG L I + +D+G Y C A N D++ ++ + + Q
Sbjct: 466 TVLRDERFFPYANGTLAIRDLQANDTGRYFCQAAN----DQNNATIVANLQVKEATQITQ 521
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLE 244
P + C A + L + W +G DL EL ++ ID G L
Sbjct: 522 GPREAIEKKGSRATFTCQASFDPSLRPSLTWRGDG-----RDLQELGDSDKYFIDDGRLV 576
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTD 301
I N + D G Y CV + + ++ + ++V G PG V+V E H + + WT
Sbjct: 577 IDNLEYGDQGNYSCVASTELDEVEARAQLLVVGSPGPVPHVEVSERHLLKHSQVHLSWTP 636
Query: 302 GATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ I Y I +A W H +GK + S L P+
Sbjct: 637 AEDHNAAIEKYDIEFEDKEMAPEKW---------HSLGK-----VPGNQTSTTLKLSPYV 682
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y F+V A N+ G GEPS PS TP P + P + G G + ++ I+W+PL
Sbjct: 683 HYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDW 742
Query: 416 NAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + +Q +T+ + VV S F YE+KVQA+N G G
Sbjct: 743 NAPQVQYRVQWRPQGTQGPWQEQTVSD----SFLVVTNTSTF--EPYEIKVQAVNSQGKG 796
Query: 475 PESEVV 480
PE +V
Sbjct: 797 PEPQVT 802
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 115/290 (39%), Gaps = 43/290 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W LL S +P DR Q++ T++ L+ E+D Y
Sbjct: 259 LVLECIAEGFPTPTIKW-----LLPSGPMPA---DRITYQNHNKTLQLLSVGEQDDGEYH 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L T + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGTARHVYYVTV-EAAPDWLHKP-KSGLY-GPGETARLDCQAQGRPQPEITWRI 367
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+GN + + + ++ G L++S V D+ + C A N HG ++ + Y
Sbjct: 368 NGNRMEELDKDQKYQIHRGALILSNVQPGDTMVTQCEARNRHGH-------LLANAYIYV 420
Query: 184 EQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A R L C A + V ++ G + +E P
Sbjct: 421 VQLPAKILTVDNQTYMGVAGRTAYLLCKAFGAPVPSVQWL-DEEGTTVLR---DERFFPY 476
Query: 236 INIDGGLLEITNASFADAGEYECVV------KSTVGKISTK-TTVIVEGP 278
N G L I + D G Y C + V + K T I +GP
Sbjct: 477 AN---GTLAIRDLQANDTGRYFCQAANDQNNATIVANLQVKEATQITQGP 523
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 112/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P+V + W ++G SE L + + +T +R +Y
Sbjct: 52 DISLKCEARGKPEVQFRWMKDGVHFRPSEELGVTVHETPHSGSFTITGNNSFAQRFQGVY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A NQL T S + P + K + E +V + CNP + +P ++
Sbjct: 112 RCFASNQLGTAMSHEIQLMAEGAPKWPKE-MVKPVEVEERESVVLPCNPPPSAEPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------TN 163
+ I I R + +NGNL + V DS Y C A
Sbjct: 171 MNSKILHIKQDERVSMGQNGNLYFANVLISDSHSDYICNAHFPGTRTIIQKEPIDLRVKA 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S + + + L L C A + ++ +
Sbjct: 231 TNTMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWL-----LPS 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ + D GEY C+ ++++G V VE P
Sbjct: 280 GPMPADRITYQNHN---KTLQLLSVGEQDDGEYHCLAENSLGTARHVYYVTVEAAP 332
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG---NMDLNELE 232
V+ P EQ PP++ + ++ L+C A + +V + W +GV + + E
Sbjct: 31 VMEPPVITEQSPPRLVVFPTDDISLKCEARGKP--EVQFRWMKDGVHFRPSEELGVTVHE 88
Query: 233 TPNINIDGGLLEITNASFAD--AGEYECVVKSTVG-KISTKTTVIVEGPPGLP 282
TP+ G N SFA G Y C + +G +S + ++ EG P P
Sbjct: 89 TPH---SGSFTITGNNSFAQRFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWP 138
>gi|211279|gb|AAA48632.1| cell adhesion molecule, partial [Gallus gallus]
Length = 1260
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 212/491 (43%), Gaps = 46/491 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C A G P + SW NG + + ED R D + I ER A+YQ
Sbjct: 329 DGTLICRANGNPKPSISWLTNGVPI---AIAPEDPSRKVDGDTI--IFSAVQERSSAVYQ 383
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL P P I C +PKP+ W +
Sbjct: 384 CNASNEYGYLLANAFVNVLAEPPRILT-PANKLYQVIADSPALIDCAYFGSPKPEIEWFR 442
Query: 126 --DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G+I+ G +NG L I +D +G Y+C A N G +++ +L V P+
Sbjct: 443 GVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMI 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ P I C + L IW + N +L + E + D L
Sbjct: 501 IKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-----NNELPDDERFLVGKDN--L 553
Query: 244 EITNASFADAGEYECVVKSTVGKISTK----------TTVIVEGPPGLPGGVQVVEVHKT 293
I N + D G Y C+V +T+ +S T I+ P P +++ +
Sbjct: 554 TIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLER 613
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
S + W G N PIT++ I + W +E V G + +++ L
Sbjct: 614 SIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGSQT---------TVQLKL 663
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+VIA NE+G +PS PS QY T + P + PS + G G + +L I+WE L
Sbjct: 664 SPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSEPDNLVITWESLK 723
Query: 412 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ N P + YK+ WR+K+ D E+ S + NV +V F YE+KVQA+ND
Sbjct: 724 GFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGTPTF--VPYEIKVQALND 778
Query: 471 VGPGPE-SEVV 480
+G PE SEV+
Sbjct: 779 LGYAPEPSEVI 789
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G+P W + G L + +R F ++ T++ ++ E D Y+
Sbjct: 240 LLLECIAAGLPTPVIRWIKEGGELPA--------NRTFFENFKKTLKIIDVSEADSGNYK 291
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + P GE G T+ C PKP W
Sbjct: 292 CTARNTLGSTHHVISVTV-KAAPYWITAPRNLVLSPGEDG--TLICRANGNPKPSISWLT 348
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RK+ + ++ S V S +Y C A+N +G + + VL
Sbjct: 349 NGVPIAIAPEDPSRKV-DGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 404
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I A++ Q+ A + L+D AY + GV+ + NE
Sbjct: 405 ----PPRILTPANKLYQV--IADSPALIDCAYFGSPKPEIEWFRGVKGSILRGNEY---- 454
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +GK + + V+ P
Sbjct: 455 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDP 497
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 117/295 (39%), Gaps = 26/295 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + + Q L + +N +
Sbjct: 29 VDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDK---DAQVTMKPNSGTLVVNIMNGVKA 85
Query: 61 PA---MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
A +YQC A+N+ S+ + + P + K LE + EG ++ + C P
Sbjct: 86 EAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-NHVREGDSLVLNCRPPVGL 144
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D ++ + NG+L S V +D+ Y C A H + +
Sbjct: 145 PPPIIFWMDNAFQRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTIQQKQP 204
Query: 175 I---VLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAYI-----WTHNGVRIG 224
I V E+ P +T + ++LR + E + W G G
Sbjct: 205 ISVKVFSTKPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPTPVIRWIKEG---G 261
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N N L+I + S AD+G Y+C ++T+G +V V+ P
Sbjct: 262 ELPANRTFFENFK---KTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVKAAP 313
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 38/241 (15%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG VQV ++ T A + W G G + ++K+ + + S+ + K
Sbjct: 801 PGNVQVHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSLSRR-------SKRHVEK 853
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S+Y+ V N G G P+SP + TP P PS +
Sbjct: 854 KILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEG-PASPDKVFKTPEGVP-SPPSFLK 911
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ L++ W P Y F N E + +RIP+
Sbjct: 912 ITNPTLDSLTLEWGS-PTHPNGVLTSYILKFQPINNTHELGP----------LVEIRIPA 960
Query: 455 E---------FYYTEYEVKVQAINDVGPGPE--SEVVTIWHDPLVIISYVCQGDLKLCLP 503
Y T Y+ A VG G + E VTI + ++ V G ++ P
Sbjct: 961 NESSLILKNLNYSTRYKFYFNAQTSVGSGSQITEEAVTIMDEAGILRPAVGAGKVQPLYP 1020
Query: 504 R 504
R
Sbjct: 1021 R 1021
>gi|395516502|ref|XP_003762426.1| PREDICTED: neural cell adhesion molecule L1-like protein
[Sarcophilus harrisii]
Length = 1266
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 210/482 (43%), Gaps = 38/482 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P W NG +N +LP +F + LN +YQC A N
Sbjct: 370 CEAEGEPAPEIEWKINGLPVNKHSLP---GIVFFPGEISFNNIQLN---HTGVYQCEATN 423
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
++A + VL + P + P + A G + +FC+ A+P W+K +
Sbjct: 424 VHGKILATANINVLDISP-LMQTPDDEGYAAVVGYSAYLFCDVFASPPAVITWQKPSKVE 482
Query: 131 G-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY-YEQLPP 188
G +NG L I +++D+G Y+C + G L + + L P
Sbjct: 483 RLEGPHYTTHQNGTLEIKKTTKEDAGPYTCWVKSPRGEVAVTAHLAIRDATNLTISPLNP 542
Query: 189 KITIAAHR---NLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGGLLE 244
+ I +H + ++ C +H + L +++ + G D++ I IDG L
Sbjct: 543 HV-IKSHLLVLHCEIECDSHLKHSLKLSWSKDEEALEANGTEDISR-----ITIDGDKLT 596
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I+N + D G Y C V + + T VI+ P P + + E S + W G +
Sbjct: 597 ISNVTLEDEGSYSCHVNTALDGAVATTQVIILDVPDPPENLHISERQNRSVRLTWEAGDS 656
Query: 305 NGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ IT + I N + W E+ + G + ++ + L P+ Y+F+VI
Sbjct: 657 HNSIITEFIIEFEGNKDEPGKW---------AELTKIQGNETTALLS-LAPYVKYQFRVI 706
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
N +G PS PS + TP P + P I + ++ I WEPL ++N P + Y
Sbjct: 707 GVNAVGRSLPSDPSDYHETPPAAPDKNPDNIKVEASQPKEMFIKWEPLKSMERNGPGLEY 766
Query: 423 KIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
++ WR++ +E+ E + +R+ + +T Y+VKVQAIN +G GPE + +T
Sbjct: 767 RVSWRQQGVPSEWSDELATD------NTLRVMTSSVFTPYDVKVQAINQLGSGPEPQTIT 820
Query: 482 IW 483
++
Sbjct: 821 VY 822
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 117/313 (37%), Gaps = 57/313 (18%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAM 63
+ CEA G P+ T+ W +N E L R +N T + LN
Sbjct: 54 FQFVCEAKGNPEPTFHWTKN-----EEHFSLLSDPRIISSNNTGTFKILNEGHITHFQGK 108
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S ++ P F K PLE E EG ++ + CNP P
Sbjct: 109 YRCFASNELGTAMSEEIDFIVPSIPKFPKEKIEPLEVE----EGNSIVLHCNPPKGIPPL 164
Query: 121 FVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA---------------- 161
++ D I R + + G+L + V +DS Y C A
Sbjct: 165 HIYWMNIDLQHIPQDERVYMSQKGDLYFANVEENDSRSDYCCFAAFPRLRTIVQKMPMKL 224
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQ-----LPPK-------ITIAAHRNLQLRCSAHT 206
+ H D S R + S ++ LPP+ +TI L L C A
Sbjct: 225 TVNSLKHANDSSSHRQNITKANSIKQRQPRMLLPPETSGSHSSVTIIKGGTLLLECFA-- 282
Query: 207 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
E L W +++G DL + N G L+I + D G Y C+ K+ G
Sbjct: 283 EGLPTPQITW----MKVGE-DLPKGREERENF-GKTLKIEQVTHMDKGHYRCMAKNYKGT 336
Query: 267 ISTKTTVIVEGPP 279
+ + V VE PP
Sbjct: 337 ATHEFRVTVEEPP 349
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 189/497 (38%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ F P +W + S+ LE Q+ L I+ E D Y C K+
Sbjct: 463 CDVFASPPAVITWQKP-----SKVERLEGPHYTTHQNGTLEIKKTTKE-DAGPYTCWVKS 516
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + LT+ P ++S + I C+ K W K
Sbjct: 517 PRGEVAVTAHLAIRDATNLTISP-LNPHVIKSHLLVL---HCEIECDSHLKHSLKLSWSK 572
Query: 126 DGNIIGSGGRRKI----FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
D + + G I + L IS V+ +D G YSC + ++I+L P
Sbjct: 573 DEEALEANGTEDISRITIDGDKLTISNVTLEDEGSYSCHVNTALDGAVATTQVIILDVPD 632
Query: 182 YYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
E L I+ +R+++L A + + +I G + EL N
Sbjct: 633 PPENL--HISERQNRSVRLTWEAGDSHNSIITEFIIEFEGNKDEPGKWAELTKIQGNETT 690
Query: 241 GLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVEGPPGLPG----GVQVVEVHKTSA 295
LL + A + ++ + + VG+ + + + E PP P ++V
Sbjct: 691 ALLSL--APYVKY-QFRVIGVNAVGRSLPSDPSDYHETPPAAPDKNPDNIKVEASQPKEM 747
Query: 296 TIQWTDGATNGR--PITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I+W + R P Y++ R S W S+ + R +V
Sbjct: 748 FIKWEPLKSMERNGPGLEYRVSWRQQGVPSEW---SDELATDNTLR------VMTSSVFT 798
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGGGGGKIGDLSISWEP 409
P Y+ KV A N+LG G P PQ T D P APS + ++++W+
Sbjct: 799 P---YDVKVQAINQLGSG----PEPQTITVYSGEDYPDAAPSSVSASVINSTLINVTWDR 851
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEVKV 465
+P+E+ + Y+I W K + + KE + +A R +PS ++E+++ V
Sbjct: 852 IPKERVHGHLRGYQINWWKTKSRLDERKFPKEIKTLRLAGDRSYGMVPSLDPFSEFKLTV 911
Query: 466 QAINDVGPGPESEVVTI 482
A N G GPES ++
Sbjct: 912 LAYNSKGAGPESTPISF 928
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 8/165 (4%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+GG + + C E P P+ W K G + G + L I V+ D G Y C A
Sbjct: 272 KGGTLLLECFAEGLPTPQITWMKVGEDLPKGREERENFGKTLKIEQVTHMDKGHYRCMAK 331
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + R+ V P + ++ P + N L C A E ++ + +
Sbjct: 332 NYKGTATHEFRVTVEEPPRWTKK-PESAVYSIGSNGILLCEAEGEPAPEIEW-------K 383
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
I + +N+ P I G + N G Y+C + GKI
Sbjct: 384 INGLPVNKHSLPGIVFFPGEISFNNIQLNHTGVYQCEATNVHGKI 428
>gi|26342350|dbj|BAC34837.1| unnamed protein product [Mus musculus]
Length = 895
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 209/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ L+ L Q D L I L P+ D M QC A N
Sbjct: 334 CRAKGVPPPSITWYKDAALVEVGKLTRFKQR----SDGGLQISGLLPD-DTGMLQCFAHN 388
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 389 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 446
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 447 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 506 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 559
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + V + + + W
Sbjct: 560 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKP 619
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y + N N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 620 FDGNSPLMRYVLEMSEN-NAPWT-----ILLASVD-----PEATSVMVKGLVPARSYQFR 668
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 669 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 728
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 729 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 783
Query: 478 EVVTIW 483
VT W
Sbjct: 784 SKVTEW 789
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 135/385 (35%), Gaps = 52/385 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 48 LVLTCMAEGSWPLEFKWLHNNRELTRFSL----EYRYMITSLDRT--------HAGFYRC 95
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+N++ + SF++ GE V + P+P+ W +D
Sbjct: 96 IVRNRMGALLQRQTEVQVAYMGSFEEGEKRQSVNHGEAA-VIRAPRISSFPRPQVTWFRD 154
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPS 181
G I R I L+I D+G Y A N D + I L GP+
Sbjct: 155 GRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPA 214
Query: 182 YYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELET 233
I +A + + C + L+ + +W +G + G D N
Sbjct: 215 DPIAPTIIIPPKNTSVVAGTSEVTMECVVNARPLIKLHIVWKKDGAPLSSGISDYNR--- 271
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
L I N + +DAG YEC + S+V ++ + V PP V+ E
Sbjct: 272 --------RLTIANPTVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQF---VREPER 320
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V ++ R+ R + ++ +
Sbjct: 321 HITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVGKLTRFKQRSDGGLQIS 372
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSS 374
L+P T + A N G + S+
Sbjct: 373 GLLPDDTGMLQCFAHNAAGEAQTST 397
>gi|351711148|gb|EHB14067.1| Neurofascin [Heterocephalus glaber]
Length = 1343
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 211/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T W NGE L S + +R D ++ R A+YQC N
Sbjct: 359 CRANGNPKPTVQWMVNGEPLQSAP---PNPNREVAGDTIIFRDTQVSSR--AVYQCNTSN 413
Query: 71 QLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ ++A + VL + P S + + + Y + C +P P W K+G
Sbjct: 414 EHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRWFKNG 469
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 470 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIF 526
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 527 RMPEDQVAKRGTTVQLECRVKHDPSLRLTVTWLKDDEPLYIGNRMKKEDDS--------- 577
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 578 LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLDDQATPTNRLAALPKGRPDRPRDLEL 637
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 638 TDLAERSVRLTWIPGEDNNSPITEYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 690
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 691 LQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 749
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ E + + NV + R + Y YE++V
Sbjct: 750 TPMNATSAFGPNLRYIVKWRRR-------EARETWNNVTVWGSRYVVGQTPVYVPYEIRV 802
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE V
Sbjct: 803 QAENDFGKGPEPNTV 817
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 54 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 111 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 169
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 170 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 229
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A +A W G
Sbjct: 230 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPGIA--WYKKG-- 285
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 286 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 338
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 264 DLLLECIASGVPTPGIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 316
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 317 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 373
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 374 NGEPLQSAPPNPNREVAGDTIIFRDTQVSSRAVYQCNTSNEHGYLLANAFVSVL------ 427
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 428 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 481
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 482 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 522
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 212 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 271
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 272 SGVPTPGIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 330 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 384
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 385 --PNREVAGDTIIFRDTQVSSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 433
>gi|301613548|ref|XP_002936266.1| PREDICTED: neurofascin-like [Xenopus (Silurana) tropicalis]
Length = 1176
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 209/474 (44%), Gaps = 42/474 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T WF NG+ T + I + + R + + A+YQC A N
Sbjct: 371 CRASGSPKPTIQWFMNGD----ATEVGAPNPNFEIAGDTIIFREVQ-SGNSAVYQCNASN 425
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ ++A + +L + PS P E + C +P P W K+G
Sbjct: 426 EHGYLLANAFVSILDV-PSRMLGPRNQLIRVIEYNRTQLDCPFFGSPIPTLRWFKNGQ-- 482
Query: 131 GS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
GS GG ++ ENG L I+ V ++D G Y+C ATN+ G E+ RL V P+ + P
Sbjct: 483 GSNLDGGNYRVHENGTLEINTVRKEDQGKYTCVATNILGNAENTVRLEVKE-PTRIVKGP 541
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI---GNMDLNELETPNINIDGGLLE 244
++ L C ++ L + W + ++ M +E DG L
Sbjct: 542 EDQIAKRGSSVHLDCRVRSDSSLRLTVTWIKDDTQLYINSRMKKDE--------DG--LT 591
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I + D G Y CV K+ + + S+K + ++ P P +++ E S + W G
Sbjct: 592 IFGVAEKDQGAYTCVAKTELDQDSSKAYLTIQDKPDPPQDLELTEPSVRSVRLTWVPGDD 651
Query: 305 NGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT + + + + TW N++ + V+ S+ L P+ Y+F+V+
Sbjct: 652 NNSPITGFIVQFEEDRHQPGTWHNLAS--VPANVN--------SVILQLSPYVNYQFRVL 701
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NELG PS S ++ T P P + G G ++ I+W PL + PN+ Y
Sbjct: 702 ALNELGSSMPSPSSERFQTAGAPPETNPGDVKGAGTSKNNMEITWTPLNSTQAYGPNLRY 761
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
+ WR+++ E S + + N + V P YT+YE++VQA N+ G PE
Sbjct: 762 NVKWRQRHTGEPWS-NITVWDNKHV-VWNTP---VYTQYELRVQAENEFGKAPE 810
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 185/490 (37%), Gaps = 66/490 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
DL C A GVP W++ G L S L E+ ++ T+R + E D Y
Sbjct: 276 DLLLECIASGVPTPDIMWYKKGGELPSRKLKFENFNK--------TLRIIGVSEEDSGEY 327
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C+A N++ + + +RV P + P GE G + C +PKP W
Sbjct: 328 FCQASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGENGR--LVCRASGSPKPTIQWF 384
Query: 125 KDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G+ G FE ++ V +S +Y C A+N HG + + +L PS
Sbjct: 385 MNGDATEVGAPNPNFEIAGDTIIFREVQSGNSAVYQCNASNEHGYLLANAFVSILDVPS- 443
Query: 183 YEQLPPK---ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELETPNIN 237
L P+ I + + QL C + + + G + GN ++E
Sbjct: 444 -RMLGPRNQLIRVIEYNRTQLDCPFFGSPIPTLRWFKNGQGSNLDGGNYRVHE------- 495
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
G LEI D G+Y CV + +G + V+ P + G + ++ K +++
Sbjct: 496 --NGTLEINTVRKEDQGKYTCVATNILGNAENTVRLEVKEPTRIVKGPE-DQIAKRGSSV 552
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
H R++ + ++ I + Y + E+ L +
Sbjct: 553 -------------HLDCRVRSD---SSLRLTVTWIKDDTQLYINSRMKKDEDGLTIFGVA 596
Query: 358 E-----FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
E + +A EL S Y T DKP P + + + ++W +P
Sbjct: 597 EKDQGAYTCVAKTELD----QDSSKAYLTIQDKP-DPPQDLELTEPSVRSVRLTW--VPG 649
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEY-GNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ N+P + + + + L NV ++++ Y Y+ +V A+N++
Sbjct: 650 DDNNSPITGFIVQFEEDRHQPGTWHNLASVPANVNSVILQLSP---YVNYQFRVLALNEL 706
Query: 472 G---PGPESE 478
G P P SE
Sbjct: 707 GSSMPSPSSE 716
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 195/499 (39%), Gaps = 73/499 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
C FG P T WF+NG+ N D Y + +N L I + E D Y C A
Sbjct: 465 CPFFGSPIPTLRWFKNGQGSNL------DGGNYRVHENGTLEINTVRKE-DQGKYTCVAT 517
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN--PEAAPKPKFVWKKDG 127
N L ++ +L V +P+ + E + A G +V + C +++ + W KD
Sbjct: 518 NILGNAENTVRLEVK--EPTRIVKGPEDQI-AKRGSSVHLDCRVRSDSSLRLTVTWIKDD 574
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ R K E+G L I V+ D G Y+C A D SK L + P + L
Sbjct: 575 TQLYINSRMKKDEDG-LTIFGVAEKDQGAYTCVAKTELDQDSSKAYLTIQDKPDPPQDL- 632
Query: 188 PKITIAAHRNLQLRCSAHTEELLDV-AYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++T + R+++L + + +I R + L + N++ +L+++
Sbjct: 633 -ELTEPSVRSVRLTWVPGDDNNSPITGFIVQFEEDRHQPGTWHNLASVPANVNSVILQLS 691
Query: 247 ---NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWTDG 302
N F E + S++ S++ PP PG V+ K + I WT
Sbjct: 692 PYVNYQFRVLALNE--LGSSMPSPSSERFQTAGAPPETNPGDVKGAGTSKNNMEITWT-- 747
Query: 303 ATNGRPITHYKIIA-RTNWNSTWFNVSEHVIGKEVDRYTGRKEASI---ENVLVPWST-- 356
P+ + +N W R+TG ++I +N V W+T
Sbjct: 748 -----PLNSTQAYGPNLRYNVKWRQ-----------RHTGEPWSNITVWDNKHVVWNTPV 791
Query: 357 ---YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL-PR 412
YE +V A NE G S Y+ D P AP+ I +S+ W + P
Sbjct: 792 YTQYELRVQAENEFGKAPEPSTMIGYSG-EDYPKAAPTDIKLRVMNSTAISLQWTRVAPA 850
Query: 413 EKQNAPNIYYKIFWR------------KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460
Q + Y FWR KK F + ++ GI IP Y+
Sbjct: 851 SIQGSLLEYRAYFWRESSLLKGVWVSRKKQQQSFMGDRVR-----GIVSQLIP----YSI 901
Query: 461 YEVKVQAINDVGPGPESEV 479
Y++ + A+N G GP+S+V
Sbjct: 902 YKLYLVAVNGRGDGPKSDV 920
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 115/297 (38%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P +SW +NG+ N P R + L I P
Sbjct: 66 VDPRDNILIECEAQGNPYPMFSWTKNGKFYNVAKDPRVSFRR---RSGTLEIEIHGGGRP 122
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAA 116
E YQC A+NQ T S+ L ++ P + K L+ EG + + CN P
Sbjct: 123 EDYEGEYQCSARNQHGTALSNKILLQVSRSPLWPKENLDP-VVVNEGAFLILQCNPPHGL 181
Query: 117 PKPKFVWKKD-GNIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATN--VHGMDESKG 172
P P W I R NG+L S V R D+ YSC A + H + +
Sbjct: 182 PPPVIFWMSSLMEPIVQDKRVSQGLNGDLYFSNVLRQDTQTDYSCNARSHFTHTIQQKNP 241
Query: 173 -RLIVLHGPSYYEQLPPKI---------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P + + +L L C A D+ +W G
Sbjct: 242 YTLKVLTTRGVPERTPTFLLPTGTSSSKLVLRDEDLLLECIASGVPTPDI--MWYKKG-- 297
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + +L+ N N L I S D+GEY C + +G I +V V+ P
Sbjct: 298 -GELPSRKLKFENFN---KTLRIIGVSEEDSGEYFCQASNKMGSIRHTISVRVKAAP 350
>gi|348552762|ref|XP_003462196.1| PREDICTED: neural cell adhesion molecule L1-like isoform 3 [Cavia
porcellus]
Length = 1247
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 206/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P +W NG + L+ +Y I L + + P D + QC A+N
Sbjct: 348 CQAQGRPQPEITWRINGNRMEE----LDKDQKYQIHRGALILSNVQP-GDTMVTQCEARN 402
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT-IFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L K ++++TY G G + C AP P W ++G
Sbjct: 403 RHGHLLANAYIYVVQLPA--KILTVDNQTYMGVAGRTAYLLCKAFGAPVPSVQWLDEEGT 460
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQ 185
+ R + NG L I + +D+G Y C A N D++ ++ + + Q
Sbjct: 461 TVLRDERFFPYANGTLAIRDLQANDTGRYFCQAAN----DQNNATIVANLQVKEATQITQ 516
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLE 244
P + C A + L + W +G DL EL ++ ID G L
Sbjct: 517 GPREAIEKKGSRATFTCQASFDPSLRPSLTWRGDG-----RDLQELGDSDKYFIDDGRLV 571
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTD 301
I N + D G Y CV + + ++ + ++V G PG V+V E H + + WT
Sbjct: 572 IDNLEYGDQGNYSCVASTELDEVEARAQLLVVGSPGPVPHVEVSERHLLKHSQVHLSWTP 631
Query: 302 GATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ I Y I +A W H +GK + S L P+
Sbjct: 632 AEDHNAAIEKYDIEFEDKEMAPEKW---------HSLGK-----VPGNQTSTTLKLSPYV 677
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y F+V A N+ G GEPS PS TP P + P + G G + ++ I+W+PL
Sbjct: 678 HYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDW 737
Query: 416 NAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + +Q +T+ + VV S F YE+KVQA+N G G
Sbjct: 738 NAPQVQYRVQWRPQGTQGPWQEQTVSD----SFLVVTNTSTF--EPYEIKVQAVNSQGKG 791
Query: 475 PESEVV 480
PE +V
Sbjct: 792 PEPQVT 797
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 115/290 (39%), Gaps = 43/290 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W LL S +P DR Q++ T++ L+ E+D Y
Sbjct: 254 LVLECIAEGFPTPTIKW-----LLPSGPMPA---DRITYQNHNKTLQLLSVGEQDDGEYH 305
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L T + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 306 CLAENSLGTARHVYYVTV-EAAPDWLHKP-KSGLY-GPGETARLDCQAQGRPQPEITWRI 362
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+GN + + + ++ G L++S V D+ + C A N HG ++ + Y
Sbjct: 363 NGNRMEELDKDQKYQIHRGALILSNVQPGDTMVTQCEARNRHGH-------LLANAYIYV 415
Query: 184 EQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A R L C A + V ++ G + +E P
Sbjct: 416 VQLPAKILTVDNQTYMGVAGRTAYLLCKAFGAPVPSVQWL-DEEGTTVLR---DERFFPY 471
Query: 236 INIDGGLLEITNASFADAGEYECVV------KSTVGKISTK-TTVIVEGP 278
N G L I + D G Y C + V + K T I +GP
Sbjct: 472 AN---GTLAIRDLQANDTGRYFCQAANDQNNATIVANLQVKEATQITQGP 518
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P+V + W ++G SE L + + +T +R +Y
Sbjct: 47 DISLKCEARGKPEVQFRWMKDGVHFRPSEELGVTVHETPHSGSFTITGNNSFAQRFQGVY 106
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A NQL T S + P + K ++ E +V + CNP + +P ++
Sbjct: 107 RCFASNQLGTAMSHEIQLMAEGAPKWPKEMVKPVEVE-ERESVVLPCNPPPSAEPLRIYW 165
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA------------------TN 163
+ I I R + +NGNL + V DS Y C A
Sbjct: 166 MNSKILHIKQDERVSMGQNGNLYFANVLISDSHSDYICNAHFPGTRTIIQKEPIDLRVKA 225
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S + + + L L C A + ++ +
Sbjct: 226 TNTMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWL-----LPS 274
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ + D GEY C+ ++++G V VE P
Sbjct: 275 GPMPADRITYQNHN---KTLQLLSVGEQDDGEYHCLAENSLGTARHVYYVTVEAAP 327
>gi|47227361|emb|CAF96910.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1154
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 206/483 (42%), Gaps = 33/483 (6%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+D+ C G P T +W NG L P +R + D + + + D A+Y
Sbjct: 322 SDVLIKCSVSGTPQPTVTWRVNGNRLQDSPAP----NRRVLGDTI--VLHNTKPSDSAVY 375
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ T S+A + ++ P E + A EG V + C ++P P W
Sbjct: 376 QCEASNRHGTLLSNANIMIMNFPPMILTENDEDYS-AVEGKRVMMHCKVFSSPSPTITWS 434
Query: 125 KDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KD G R + +NG L I ++D+G Y+C A N G + ++ + P+
Sbjct: 435 KDDTSDSVDGPRFSVHDNGTLEIYRAEKEDAGPYTCFAKNTEG-SSAINAMLSVKDPTRI 493
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ P I Q C A ++ D +W + I +N E ++ G
Sbjct: 494 VEPPEDSRILKGTTAQFSCLAEYDKSFSNDFEILWEKDDKEIA---VNYTENSRYFVEDG 550
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
LL+I N S D G Y C+ ++ + ++V P P + + E S ++W
Sbjct: 551 LLQIVNVSHLDKGVYTCLARTPMDGDKATALLLVIDVPDAPQYLVLSEHKSKSVKLKWIP 610
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIG--KEVDRYTGRKEASIENVLVPWSTYEF 359
G + T + I + S+ G KE+ R G ++I L Y F
Sbjct: 611 GDDHNSSTTEFII---------EYEESQREPGNWKELLRVPGNHNSAILK-LHGHVDYCF 660
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V N +G G S P+ +Y TP P + P I ++ I+WEPL +QN P
Sbjct: 661 RVSGVNAVGRGPSSQPTERYRTPPAAPDKNPENIKIESHLPHEMDINWEPLLPIEQNGPG 720
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ +R+++ + ++Q +K + V V P+ + YE+K+QA N G GPE
Sbjct: 721 LEYKVSYRRQDVEEDWQEHIVKRHSFV---VKNTPT---FVPYEIKIQARNHQGWGPEPR 774
Query: 479 VVT 481
+ T
Sbjct: 775 IAT 777
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A G P W + G+ L ++ +E + V + D Y
Sbjct: 234 DLNLECIAAGFPTPQVEWVKMGQRLPTKAT-IESHGKLLFVPTV-------EQEDGGKYM 285
Query: 66 CRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
C+AKN L + +T++ P + P ES+ + G +V I C+ P+P W
Sbjct: 286 CKAKNTLG---EAVHYFTVTVEGPPEWVSEP-ESQ-LSMIGSDVLIKCSVSGTPQPTVTW 340
Query: 124 KKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ +GN + R++ + +++ DS +Y C A+N HG S +++++
Sbjct: 341 RVNGNRLQDSPAPNRRVLGD-TIVLHNTKPSDSAVYQCEASNRHGTLLSNANIMIMN--- 396
Query: 182 YYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
PP I + + + + C + + W+ + + ++
Sbjct: 397 ----FPPMILTENDEDYSAVEGKRVMMHCKVFSSPSPTIT--WSKDDTS------DSVDG 444
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
P ++ D G LEI A DAG Y C K+T G + + V+ P
Sbjct: 445 PRFSVHDNGTLEIYRAEKEDAGPYTCFAKNTEGSSAINAMLSVKDP 490
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 108/298 (36%), Gaps = 47/298 (15%)
Query: 11 CEAFGVPDVTYSWFRNGE----LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
CEA G P+ + W +NG+ L+ + ED + I +N Y +Y+C
Sbjct: 28 CEAKGNPEPQFRWTKNGQQFDPFLDPRLIKEEDSGTFVIPNNGNLTEYQ------GIYRC 81
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKK 125
A N L T S ++ P F K ++ EG + CN P+ P + W
Sbjct: 82 FASNVLGTAISREIEFIVPNVPKFPKETIDP-VVVEEGQPFVLKCNPPDGIPPLQIYWMT 140
Query: 126 DG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTA-----------TNVHGMDESK- 171
I R NG+L S V +D Y C A T + + ++K
Sbjct: 141 ISLQHIEQDERVSTSLNGDLYFSHAVDKDSRRDYCCFAAFPRIRTIVQKTAMSVIVKTKK 200
Query: 172 ------GRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
I+ PS PP + + +L L C A V W G
Sbjct: 201 DASPEVANAILQRRPSI--MTPPGGKSEARLVKGEDLNLECIAAGFPTPQVE--WVKMGQ 256
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
R+ I G LL + D G+Y C K+T+G+ TV VEGPP
Sbjct: 257 RLPT-------KATIESHGKLLFVPTVEQEDGGKYMCKAKNTLGEAVHYFTVTVEGPP 307
>gi|312077940|ref|XP_003141521.1| hypothetical protein LOAG_05936 [Loa loa]
gi|307763314|gb|EFO22548.1| hypothetical protein LOAG_05936, partial [Loa loa]
Length = 1090
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 216/491 (43%), Gaps = 38/491 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ--DRYFIQDNVLTIRYLNP----ER 59
D+T+ C A G P S+F+NG E P +D + I +VLT+R +
Sbjct: 114 DVTFNCSANGKPAPVISFFKNG----VEMKPRDDDVNRNWEITGSVLTLRNVKKGIAGSG 169
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D A+YQC+ +N+ +++ L +L KP P E E G+ NVT+ C A+P
Sbjct: 170 DNAVYQCKVENKHGYLWANFYLNLLAFKPELLSDPGEVEAVVGQ--NVTLACKFFASPNV 227
Query: 120 KFVWKKDGNIIGSGGRRKIFE-----NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W+ + + G R + G L+I V RD G Y+C TN HG ++ L
Sbjct: 228 NITWE---STVLHGLRHHVVPADADGEGKLIIDAVGRDAEGEYTCIGTNKHGTEKGTAHL 284
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
I+ P + A + L+L C A +E L+V Y W NG + +
Sbjct: 285 IIREATRLEPFERPLEKVLAGQRLELPCKAEHDENLEVTYEWLVNGKPLIEQYIQSGHY- 343
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT- 293
+ D L ITN + DA Y C+ K+ + + V V+ P L + + T
Sbjct: 344 -LITDKNSLIITNPARYDAALYTCIAKTALDSVKKSVQVGVDDVPNLVHMAFLTKCDDTA 402
Query: 294 ---SATIQWTDGATNGRPI----THYKIIARTNWNSTWFNVSEHVIG---KEVDRYTGRK 343
S + ++ + PI Y+I T+ W + + VD
Sbjct: 403 QIASISFEYMEDIDFSAPIKEIWAQYQIDEETD-GVVWLTHPHPALADSLQTVDDNQRIV 461
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ +I+ L P+ Y F+V N+ G G P++ + TPA P + P + G + +L
Sbjct: 462 KGTIDVSLRPFGKYRFRVFGRNDFGDGAPTNVNGGCITPARVPDRNPEGVSATGTRPENL 521
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKE-YGNVGIAVVRIPSEFYYTEY 461
+ W+P+PRE N N +Y I +R +D E++ E +++ Y + + + E + Y
Sbjct: 522 IVFWKPMPREDWNGRNFHYIIRYRPAGSDAEWKEEIVEDPYSDR--HTIELSVEEPFRPY 579
Query: 462 EVKVQAINDVG 472
EV+V+A N+ G
Sbjct: 580 EVQVRAANENG 590
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 15/178 (8%)
Query: 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDS 154
+S A EG + C P+P +W+ +G I R +E G L+ VS +
Sbjct: 13 QSSPIALEGSVHKLHCFFSGYPEPTPIWRFNGLDIPEDDSRYTYEAYGKTLVFNVSAEIE 72
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
GIY C H + + ++V P + PP + ++ CSA+ + +++
Sbjct: 73 GIYECIF-KAHPNLDRRFDVVVEAAPYWTAGPPPNKRTSEGEDVTFNCSANGKPAPVISF 131
Query: 215 IWTHNGVRIG--NMDLNELETPNINIDGGLLEITN-----ASFADAGEYECVVKSTVG 265
NGV + + D+N N I G +L + N A D Y+C V++ G
Sbjct: 132 F--KNGVEMKPRDDDVNR----NWEITGSVLTLRNVKKGIAGSGDNAVYQCKVENKHG 183
>gi|45383994|ref|NP_990597.1| neuronal cell adhesion molecule precursor [Gallus gallus]
gi|63707|emb|CAA41391.1| Nr-CAM protein [Gallus gallus]
Length = 1268
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 211/491 (42%), Gaps = 46/491 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C A G P + SW NG + + ED R D + I ER A+YQ
Sbjct: 353 DGTLICRANGNPKPSISWLTNGVPI---AIAPEDPSRKVDGDTI--IFSAVQERSSAVYQ 407
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL P P I C +PKP+ W +
Sbjct: 408 CNASNEYGYLLANAFVNVLAEPPRILT-PANKLYQVIADSPALIDCAYFGSPKPEIEWFR 466
Query: 126 --DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G+I+ G +NG L I +D +G Y+C A N G +++ +L V P+
Sbjct: 467 GVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ P I C + L IW + N +L + E + D L
Sbjct: 525 IKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-----NNELPDDERFLVGKDN--L 577
Query: 244 EITNASFADAGEYECVVKSTVGKISTK----------TTVIVEGPPGLPGGVQVVEVHKT 293
I N + D G Y C+V +T+ +S T I+ P P +++ +
Sbjct: 578 TIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLER 637
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
S + W G N PIT++ I + W +E V G +++ L
Sbjct: 638 SIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGSH---------TTVQLKL 687
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+VIA NE+G +PS PS QY T + P + PS + G G + +L I+WE L
Sbjct: 688 SPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSEPDNLVITWESLK 747
Query: 412 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ N P + YK+ WR+K+ D E+ S + NV +V F YE+KVQA+ND
Sbjct: 748 GFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGTPTF--VPYEIKVQALND 802
Query: 471 VGPGPE-SEVV 480
+G PE SEV+
Sbjct: 803 LGYAPEPSEVI 813
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G+P W + G L + +R F ++ T++ ++ E D Y+
Sbjct: 264 LLLECIAAGLPTPVIRWIKEGGELPA--------NRTFFENFKKTLKIIDVSEADSGNYK 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + P GE G T+ C PKP W
Sbjct: 316 CTARNTLGSTHHVISVTV-KAAPYWITAPRNLVLSPGEDG--TLICRANGNPKPSISWLT 372
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RK+ + ++ S V S +Y C A+N +G + + VL
Sbjct: 373 NGVPIAIAPEDPSRKV-DGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 428
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I A++ Q+ A + L+D AY + GV+ + NE
Sbjct: 429 ----PPRILTPANKLYQV--IADSPALIDCAYFGSPKPEIEWFRGVKGSILRGNEY---- 478
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +GK + + V+ P
Sbjct: 479 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDP 521
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 26/295 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + + Q L + +N +
Sbjct: 53 VDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDK---DAQVTMKPNSGTLVVNIMNGVKA 109
Query: 61 PA---MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
A +YQC A+N+ S+ + + P + K LE + EG ++ + C P
Sbjct: 110 EAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-NHVREGDSLVLNCRPPVGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGI-YSCTATNVHGMDESKGRL 174
P ++ D ++ + NG+L S V +D+ + Y C A H + +
Sbjct: 169 PPPIIFWMDNAFQRLPQSERVSQGLNGDLYFSNVQPEDTRVDYICYARFNHTQTIQQKQP 228
Query: 175 I---VLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAY-----IWTHNGVRIG 224
I V E+ P +T + ++LR + E + W G G
Sbjct: 229 ISVKVFSTKPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPTPVIRWIKEG---G 285
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N N L+I + S AD+G Y+C ++T+G +V V+ P
Sbjct: 286 ELPANRTFFENFK---KTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVKAAP 337
>gi|1842429|gb|AAB47754.1| ankyrin binding cell adhesion molecule neurofascin [Rattus
norvegicus]
Length = 1217
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 213/497 (42%), Gaps = 64/497 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NG+ L S P ++ D +D ++ R A+YQC
Sbjct: 334 CRANGNPKPTVQWLVNGDPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 384
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 385 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 443
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG +++NG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 444 GQ--GSNLDGGNYHVYQNGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 501 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 552
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 553 -LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 611
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 612 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VLHDHSKFPGSVNSA 664
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 665 VLH-LSPYVNYDFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 723
Query: 407 WEPLPREKQNAPNI-YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 463
W P+ PN+ YY + WR++ ET + + NV + R + Y YE+
Sbjct: 724 WTPMNATSAFGPNLRYYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 776
Query: 464 KVQAINDVGPGPESEVV 480
+VQA ND G GPE E V
Sbjct: 777 RVQAENDFGKGPEPETV 793
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 29 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 85
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 86 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 144
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 145 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 204
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 205 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 260
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 261 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 313
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 239 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 291
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 292 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 348
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 349 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 402
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 403 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 456
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI D G Y CV + +GK + + V+ P
Sbjct: 457 --YQNGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 497
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 187 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 246
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 247 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 304
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 305 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGDPLQSAPPN-- 359
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 360 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 408
>gi|462740|sp|P35331.1|NRCAM_CHICK RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
AltName: Full=Neuronal surface protein Bravo;
Short=gBravo; AltName: Full=NgCAM-related cell adhesion
molecule; Short=Ng-CAM-related; Flags: Precursor
Length = 1284
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 211/491 (42%), Gaps = 46/491 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C A G P + SW NG + + ED R D + I ER A+YQ
Sbjct: 353 DGTLICRANGNPKPSISWLTNGVPI---AIAPEDPSRKVDGDTI--IFSAVQERSSAVYQ 407
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL P P I C +PKP+ W +
Sbjct: 408 CNASNEYGYLLANAFVNVLAEPPRILT-PANKLYQVIADSPALIDCAYFGSPKPEIEWFR 466
Query: 126 --DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G+I+ G +NG L I +D +G Y+C A N G +++ +L V P+
Sbjct: 467 GVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ P I C + L IW + N +L + E + D L
Sbjct: 525 IKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-----NNELPDDERFLVGKDN--L 577
Query: 244 EITNASFADAGEYECVVKSTVGKISTK----------TTVIVEGPPGLPGGVQVVEVHKT 293
I N + D G Y C+V +T+ +S T I+ P P +++ +
Sbjct: 578 TIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLER 637
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
S + W G N PIT++ I + W +E V G +++ L
Sbjct: 638 SIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGSH---------TTVQLKL 687
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+VIA NE+G +PS PS QY T + P + PS + G G + +L I+WE L
Sbjct: 688 SPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSEPDNLVITWESLK 747
Query: 412 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ N P + YK+ WR+K+ D E+ S + NV +V F YE+KVQA+ND
Sbjct: 748 GFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGTPTF--VPYEIKVQALND 802
Query: 471 VGPGPE-SEVV 480
+G PE SEV+
Sbjct: 803 LGYAPEPSEVI 813
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G+P W + G L + +R F ++ T++ ++ E D Y+
Sbjct: 264 LLLECIAAGLPTPVIRWIKEGGELPA--------NRTFFENFKKTLKIIDVSEADSGNYK 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + P GE G T+ C PKP W
Sbjct: 316 CTARNTLGSTHHVISVTV-KAAPYWITAPRNLVLSPGEDG--TLICRANGNPKPSISWLT 372
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RK+ + ++ S V S +Y C A+N +G + + VL
Sbjct: 373 NGVPIAIAPEDPSRKV-DGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 428
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I A++ Q+ A + L+D AY + GV+ + NE
Sbjct: 429 ----PPRILTPANKLYQV--IADSPALIDCAYFGSPKPEIEWFRGVKGSILRGNEY---- 478
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +GK + + V+ P
Sbjct: 479 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDP 521
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 26/295 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + + Q L + +N +
Sbjct: 53 VDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDK---DAQVTMKPNSGTLVVNIMNGVKA 109
Query: 61 PA---MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
A +YQC A+N+ S+ + + P + K LE + EG ++ + C P
Sbjct: 110 EAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-NHVREGDSLVLNCRPPVGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGI-YSCTATNVHGMDESKGRL 174
P ++ D ++ + NG+L S V +D+ + Y C A H + +
Sbjct: 169 PPPIIFWMDNAFQRLPQSERVSQGLNGDLYFSNVQPEDTRVDYICYARFNHTQTIQQKQP 228
Query: 175 I---VLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAY-----IWTHNGVRIG 224
I V E+ P +T + ++LR + E + W G G
Sbjct: 229 ISVKVFSTKPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPTPVIRWIKEG---G 285
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N N L+I + S AD+G Y+C ++T+G +V V+ P
Sbjct: 286 ELPANRTFFENFK---KTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVKAAP 337
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 38/241 (15%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG VQV ++ T A + W G G + ++K+ + + S+ + K
Sbjct: 825 PGNVQVHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSLSRR-------SKRHVEK 877
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S+Y+ V N G G P+SP + TP P PS +
Sbjct: 878 KILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEG-PASPDKVFKTPEGVP-SPPSFLK 935
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ L++ W P Y F N E + +RIP+
Sbjct: 936 ITNPTLDSLTLEWGS-PTHPNGVLTSYILKFQPINNTHELGP----------LVEIRIPA 984
Query: 455 E---------FYYTEYEVKVQAINDVGPGPE--SEVVTIWHDPLVIISYVCQGDLKLCLP 503
Y T Y+ A VG G + E VTI + ++ V G ++ P
Sbjct: 985 NESSLILKNLNYSTRYKFYFNAQTSVGSGSQITEEAVTIMDEAGILRPAVGAGKVQPLYP 1044
Query: 504 R 504
R
Sbjct: 1045 R 1045
>gi|350590168|ref|XP_003131297.2| PREDICTED: protein sidekick-2, partial [Sus scrofa]
Length = 2201
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 212/485 (43%), Gaps = 41/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 359 CRAKGVPPPSITWYKDAAVVEVERLSRFRQR----GDGGLQISGLVPD-DTGMFQCFARN 413
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 414 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 471
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 472 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 530
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + Y+W +G + +++ N P + +D G L I
Sbjct: 531 PQDQSVIKGTQASMVCGVTHDPRVTTRYVWEKDGTTL-SLEGN----PRLRLDKSGSLHI 585
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + + + + W
Sbjct: 586 SQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSTAERRAINLTWGKPF 645
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKV 361
P++ Y + N N+ W V+ VD EA+ V LVP TY+F++
Sbjct: 646 DGNSPLSRYILEVSEN-NAPW-----AVLLASVD-----PEATSVTVKGLVPARTYQFRL 694
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 695 CAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLKG 754
Query: 422 YKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 755 YIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSS 809
Query: 479 VVTIW 483
VT W
Sbjct: 810 KVTEW 814
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 175/481 (36%), Gaps = 34/481 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L R+ + ++ + D Y C A N
Sbjct: 452 CETSGAPRPAITWQKGERILASGSVQLP---RFTLLESGSLLISPTHISDAGTYTCLATN 508
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V+ + K P + G ++ + ++VW+KDG +
Sbjct: 509 SRGVDEASADL-VVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTTRYVWEKDGTTL 567
Query: 131 GSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G R ++ ++G+L IS D G Y+C + G D L V P E
Sbjct: 568 SLEGNPRLRLDKSGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVA 627
Query: 189 KITIAAHRNLQLRC-------SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
++ A R + L S + +L+V+ V + ++D E ++ + G
Sbjct: 628 TLSTAERRAINLTWGKPFDGNSPLSRYILEVSENNAPWAVLLASVDP---EATSVTVKG- 683
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L+ F + V K K + + ++ E P P V S IQW
Sbjct: 684 LVPARTYQFRLCAVND-VGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQP 742
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL----VPWSTY 357
+ + I R + ++ +G + T +A + N+L + W+ Y
Sbjct: 743 PPESHQNGLLKGYIIR-------YCLAGLPVGYQFKNIT---DADVNNLLLEDLIIWTNY 792
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
E +V A N G G SS ++ T P P + + +W + N
Sbjct: 793 EIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNAPSPQFING 851
Query: 418 PNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
N YK I W + + E T + I V + +TEY V G GP
Sbjct: 852 INQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCFTTPGDGPR 911
Query: 477 S 477
S
Sbjct: 912 S 912
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P E QN
Sbjct: 1624 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1682
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW +++N TE ++ L E G V+I + YT Y V V A N G
Sbjct: 1683 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKIKNLTGYTAYMVSVAAFNAAG 1736
Query: 473 PGPES 477
GP S
Sbjct: 1737 DGPRS 1741
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 134/381 (35%), Gaps = 56/381 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 73 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 120
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 121 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIHAPRIASFPRPQVTWF 177
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 178 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGG 237
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNEL 231
P+ I +A + + C A+ L+ + IW +G + G D N
Sbjct: 238 PADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGALLSGGISDYNR- 296
Query: 232 ETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
L I N + +DAG YEC + S+V + + V PP V+
Sbjct: 297 ----------RLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEP 343
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E H T+ + D + + I TW+ + V + + R+ R + ++
Sbjct: 344 ERHITAEMEKVVDVPCRAKGVPPPSI--------TWYKDAAVVEVERLSRFRQRGDGGLQ 395
Query: 349 -NVLVPWSTYEFKVIAGNELG 368
+ LVP T F+ A N G
Sbjct: 396 ISGLVPDDTGMFQCFARNAAG 416
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1861 IIARYSSAIAIHWASGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1917
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1918 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1951
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 219 NGVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKIST 269
G RI + N T PN+ ++ GL +T + E + G++S
Sbjct: 955 TGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSA 1010
Query: 270 KTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NS 322
T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 1011 ST--ISSGVPPELPGAPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGE 1068
Query: 323 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382
W + H + E D + + + L P++ Y F++ N +G PS PS + T
Sbjct: 1069 EWLLI--HQLTNEPDT----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTL 1121
Query: 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLK 440
P AP+ + L + W PLP + N ++ YKI K + + +TL
Sbjct: 1122 QAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLS 1178
Query: 441 EYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ E+ +TEY V+VQA N +G GP S+ V
Sbjct: 1179 H-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 1219
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1431 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNAST 1489
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1490 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPAIV 1537
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI- 452
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1538 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1597
Query: 453 ----------PSEFYY--------TEYEVKVQAINDVGPGPES 477
PS Y YE+++ N VG GP S
Sbjct: 1598 PLYSVRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1640
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 1330 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1388
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1389 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1440
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N VV F
Sbjct: 1441 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASTFVVDRLKPF 1498
Query: 457 YYTEYEVKVQAINDVGPGPESE 478
T Y+ +V+A ND+G SE
Sbjct: 1499 --TSYKFRVKATNDIGDSEFSE 1518
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R + + +
Sbjct: 1121 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1178
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1179 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1230
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1231 GPTNVSALATTSSSMLVRWNEVPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1289
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPG 474
++ Y YEV+V A +G G
Sbjct: 1290 -AQLTGLGKYVLYEVQVLAFTRIGDG 1314
>gi|326933709|ref|XP_003212943.1| PREDICTED: neurofascin-like [Meleagris gallopavo]
Length = 1043
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 215/489 (43%), Gaps = 54/489 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAK 69
C A G P + W NGE + + R D TI + + + A+YQC A
Sbjct: 174 CRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVYQCNAS 227
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-- 127
N+ ++A + VL + P P + + C +P P W K+G
Sbjct: 228 NEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQG 286
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
N + GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V P+ + P
Sbjct: 287 NTL-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKAEAQVRLEV-KDPTRIVRGP 344
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEI 245
+ +L C + L + W + + IGN E D GL I
Sbjct: 345 EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DDGLT-I 395
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIV---------EGP---PGLPGGVQVVEVHKT 293
+ D G+Y CV + + K S K + V E P P P +++ ++ +
Sbjct: 396 YGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRELPKERPDRPRDLELSDLAER 455
Query: 294 SATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
S + W G N PIT Y + + TW N S RY G +++ + L
Sbjct: 456 SVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSAVLS-L 505
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+W PL
Sbjct: 506 SPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLN 565
Query: 412 REKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ PN+ Y + WR+++ + +ET+K +V V P Y YE+KVQA ND
Sbjct: 566 ATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQAEND 619
Query: 471 VGPGPESEV 479
G PE E
Sbjct: 620 FGRAPEPET 628
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 185/498 (37%), Gaps = 85/498 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L + LE+ ++ NV E D Y
Sbjct: 79 DLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNV-------SEEDSGEYF 131
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 132 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPSIQWLV 188
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I E I V RD S +Y C A+N HG + + VL
Sbjct: 189 NGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 242
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+I A RN ++ + LD + W NG N L+
Sbjct: 243 ---DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNG------QGNTLDG 291
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
N + G LE++ A D G Y CV + +GK + + V+ P + G + V +
Sbjct: 292 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGPEDQVVKR 351
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
S P H ++ + ++ + + Y G + ++ L
Sbjct: 352 GSM------------PRLHCRVK-----HDPTLKLTVTWLKDDAPLYIGNRMKKEDDGLT 394
Query: 353 PWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADK----PYQAPSRIGGGGGKIGDL 403
+ E + +A EL + PA++ P + P R ++ DL
Sbjct: 395 IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRELPKERPDR--PRDLELSDL 452
Query: 404 S-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GNVGIAVVRIPS 454
+ ++W +P + N+P Y + + + FQ T + GNV AV+ +
Sbjct: 453 AERSVKLTW--IPGDDNNSPITDYIV---QFEEDRFQPGTWHNHSRYPGNVNSAVLSLSP 507
Query: 455 EFYYTEYEVKVQAINDVG 472
Y Y+ +V A+NDVG
Sbjct: 508 ---YVNYQFRVIAVNDVG 522
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 77 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 136
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 137 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 193
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 194 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 246
>gi|1842427|gb|AAB47753.1| ankyrin binding cell adhesion molecule neurofascin, partial [Rattus
norvegicus]
Length = 1166
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 212/501 (42%), Gaps = 62/501 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPA 62
D C A G P T W NG+ L S + D +D ++ R A
Sbjct: 340 DGRLVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSR--------A 391
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC N+ ++A + VL + P P + C +P P
Sbjct: 392 VYQCNTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLR 450
Query: 123 WKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K+G GS GG +++NG+L I + ++D GIY+C ATN+ G E++ RL V
Sbjct: 451 WFKNGQ--GSNLDGGNYHVYQNGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KD 507
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNIN 237
P+ ++P +QL C + L + W + + IGN E ++
Sbjct: 508 PTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---- 563
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLP 282
L I + D G Y C+ + + + K + V +G P P
Sbjct: 564 -----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRP 618
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + F + + ++ G
Sbjct: 619 RDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VLHDHSKFPGS 671
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + +
Sbjct: 672 VNSAVLH-LSPYVNYDFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNN 730
Query: 403 LSISWEPLPREKQNAPNI-YYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYT 459
+ I+W P+ PN+ YY + WR++ ET + + NV + R + Y
Sbjct: 731 MEITWTPMNATSAFGPNLRYYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYV 783
Query: 460 EYEVKVQAINDVGPGPESEVV 480
YE++VQA ND G GPE E V
Sbjct: 784 PYEIRVQAENDFGKGPEPETV 804
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 53/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 23 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 79
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 80 EEYEGEYQCFARNKFGTALSNPIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 138
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R NG+L S V D YSC A
Sbjct: 139 PSPVIFWMSTSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 198
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAH-----RNLQLRC 202
TN D S R + PS+ + P+ T ++ +L L C
Sbjct: 199 FTLKVLTNNPYNDSSLRNHPDIYSARGVAERTPSF---MYPQGTSSSQMVLRGMDLLLEC 255
Query: 203 SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A D+A W G G++ ++ + N N L ITN S D+GEY C+ +
Sbjct: 256 IASGVPTPDIA--WYKKG---GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASN 307
Query: 263 TVGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 308 KMGSIRHTISVRVKAAP 324
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 250 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 302
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 303 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 359
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 360 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 413
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 414 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 467
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI D G Y CV + +GK + + V+ P
Sbjct: 468 --YQNGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 508
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 248 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 305
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 306 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 362
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 363 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 418
Query: 281 L 281
+
Sbjct: 419 M 419
>gi|237858639|ref|NP_001004709.2| neurofascin isoform 3 precursor [Gallus gallus]
Length = 1144
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 216/494 (43%), Gaps = 54/494 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMY 64
D C A G P + W NGE + + R D TI + + + A+Y
Sbjct: 354 DGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVY 407
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL + P P + + C +P P W
Sbjct: 408 QCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWF 466
Query: 125 KDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 467 KNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTR 524
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDG 240
+ P + +L C + L + W + + IGN E D
Sbjct: 525 IVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DD 576
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------EGPPGLPGGVQVV 288
GL I + D G+Y CV + + K S K + V + P P +++
Sbjct: 577 GLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELS 635
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + S + W G N PIT Y + + TW N S RY G ++
Sbjct: 636 DLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSA 686
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+
Sbjct: 687 LLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEIT 745
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+KV
Sbjct: 746 WTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKV 799
Query: 466 QAINDVGPGPESEV 479
QA ND G PE E
Sbjct: 800 QAENDFGRAPEPET 813
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA----------TNV 164
P ++ ++ I R +NG+L S V D+ YSC A N
Sbjct: 170 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVR 222
+ + R + PS+ + R +L L C A D+ +W G
Sbjct: 230 YTLKVKTTRGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDI--MWYKKG-- 285
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + + + N N L I+N S D+GEY C+ + +G I +V V+ P
Sbjct: 286 -GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 338
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 262 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 321
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 322 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 378
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 379 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 431
>gi|395838780|ref|XP_003792284.1| PREDICTED: neurofascin isoform 1 [Otolemur garnettii]
Length = 1347
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 208/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 409
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 410 TSNEHGYLLANAFVSVLDVPPRMMS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 468
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 525
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IG+ E ++
Sbjct: 526 RMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGSRMKKEDDS--------- 576
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 577 LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQVTPTNRLAALPKGRPDRPRDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + ++ G +++
Sbjct: 637 TDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSAV 689
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W
Sbjct: 690 LR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITW 748
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + N + R + Y YE++V
Sbjct: 749 TPMNATSAFGPNLRYIVKWRRR-------ETREAWSNATVWGSRYVVGQTPVYVPYEIRV 801
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE + V
Sbjct: 802 QAENDFGKGPEPDTV 816
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 120/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFQWTRNSRYFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V + D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMQQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MMSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>gi|348513039|ref|XP_003444050.1| PREDICTED: neuronal cell adhesion molecule-like [Oreochromis
niloticus]
Length = 1268
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 215/476 (45%), Gaps = 35/476 (7%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+C A G P T +W NG ++ E P +D R ++D+ + + P A+YQC
Sbjct: 367 SCLASGTPKPTITWAMNG--ISIENSP-KDLSRK-VEDDTIIFTDVQPGSS-AVYQCNIS 421
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDG- 127
N+ S+A + VL+ P P ++ Y + + C+ +P PK W KD
Sbjct: 422 NEYGYLLSNAFVNVLSEPPRVLTPP--NKVYQIIKNHQALLDCSSFGSPMPKITWFKDTW 479
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ I + +NG L I +G Y+C ATN G+ E+ L V P+ + P
Sbjct: 480 SSILQEDPYILHDNGTLEIRIAQAQHNGKYTCVATNGLGIYENHVYLEVKE-PTRILKQP 538
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ R++ C+ + L W + G + +E + +D L IT+
Sbjct: 539 EYKEVQRGRSVVFECTVKHDPSLIPTMTWLKDD---GELPDDE----RLIVDSDSLTITD 591
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
+ DAG Y C++ +T+ S + V P P +++ + K S + WT G +
Sbjct: 592 VTEDDAGVYTCIMNTTLDHDSATAKLTVVERPDPPTDLELTDQKKRSVQLTWTPGDEHNS 651
Query: 308 PITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+ + I + + W N++E V G + + L P Y F+V+A N
Sbjct: 652 PVQKFLIQYEDSLHHRGHWHNLTE-VPGTKTTAHLK---------LSPHVHYTFRVLALN 701
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
+G+ PS PS Y T P + P+ + G G + +L ISW+PL + N P ++YK+
Sbjct: 702 AVGFSNPSRPSRMYKTEPAAPDENPTGVQGFGTEHNNLVISWKPLTNLQSNGPGLHYKVM 761
Query: 426 WR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
WR KK ++E+ T+ N V P+ + YE+KVQA+ND G GP+ +
Sbjct: 762 WRQKKVESEWNIVTVS--NNSKFVVSGTPT---FVPYEIKVQAVNDHGLGPDPAIA 812
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 120/298 (40%), Gaps = 27/298 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L C A G+P SW + +G+L + T L I+D + D Y+
Sbjct: 273 LEMECIAEGLPTPHISWTKISGDLPSKRTSFLNYNKTLHIEDVSAS--------DEGDYR 324
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAAPKPKFVWK 124
C AKNQL + + + + V P + P ++ A GE G ++ C PKP W
Sbjct: 325 CTAKNQLGSVHHTIHVTV-KAAPYWIDVPPKNLVLAPGESGRLS--CLASGTPKPTITWA 381
Query: 125 KDGNIIGSGGR---RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I + + RK+ E+ ++ + V S +Y C +N +G S + VL P
Sbjct: 382 MNGISIENSPKDLSRKV-EDDTIIFTDVQPGSSAVYQCNISNEYGYLLSNAFVNVLSEPP 440
Query: 182 YYEQLPPKI--TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
P K+ I H+ L L CS+ + + + + E P I D
Sbjct: 441 RVLTPPNKVYQIIKNHQAL-LDCSSFGSPMPKITWFKDTWSSILQ-------EDPYILHD 492
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
G LEI A G+Y CV + +G + V+ P + + EV + + +
Sbjct: 493 NGTLEIRIAQAQHNGKYTCVATNGLGIYENHVYLEVKEPTRILKQPEYKEVQRGRSVV 550
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 52/317 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNP 57
+D + ++ CEA G P ++SW RNG + E D++ D+ V+ I
Sbjct: 44 VDPRENIIIHCEAKGKPHPSFSWTRNGTHFDVEN----DRNVDMKPDSGTLVVDISRERV 99
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ T S + + P + K ++ EG ++ + C P A
Sbjct: 100 EHYEGVYQCTARNKHGTAVSHNIVVRQSRSPLWSKEKIKP-IVVQEGVSLVLPCRPPAGL 158
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVH--------- 165
P ++ D N +++ + NG+L S + R+D+ Y C A H
Sbjct: 159 PPPIIFWMDNNFQKLPQSKRVSQSLNGDLYFSNIRREDTRNDYICYARFPHTQTIQQKQP 218
Query: 166 ------GMDESKGRLIVLHGPS-YYEQLP-----PKITIAAHRN----------LQLRCS 203
+DE + + + + + P P I + + L++ C
Sbjct: 219 ITVRVLNLDEINDTMAAFYNDTDLFSEAPVDDRRPTFLIPSGSSSSKMVLRGDKLEMECI 278
Query: 204 AHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 262
A E L +I WT +I DL T +N + L I + S +D G+Y C K+
Sbjct: 279 A---EGLPTPHISWT----KISG-DLPSKRTSFLNYN-KTLHIEDVSASDEGDYRCTAKN 329
Query: 263 TVGKISTKTTVIVEGPP 279
+G + V V+ P
Sbjct: 330 QLGSVHHTIHVTVKAAP 346
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 17/197 (8%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G + + C E P P W K + S + N L I VS D G Y CTA N
Sbjct: 270 GDKLEMECIAEGLPTPHISWTKISGDLPSKRTSFLNYNKTLHIEDVSASDEGDYRCTAKN 329
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
G + V P Y+ +PPK + +A + +L C A + W NG+
Sbjct: 330 QLGSVHHTIHVTVKAAP-YWIDVPPKNLVLAPGESGRLSCLASGTPKPTIT--WAMNGIS 386
Query: 223 IGN--MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
I N DL+ ++ + T+ + Y+C + + G + + V ++ PP
Sbjct: 387 IENSPKDLSR------KVEDDTIIFTDVQPGSSAVYQCNISNEYGYLLSNAFVNVLSEPP 440
Query: 280 GL---PGGV-QVVEVHK 292
+ P V Q+++ H+
Sbjct: 441 RVLTPPNKVYQIIKNHQ 457
>gi|51095143|gb|EAL24386.1| neuronal cell adhesion molecule [Homo sapiens]
gi|119603835|gb|EAW83429.1| neuronal cell adhesion molecule, isoform CRA_c [Homo sapiens]
Length = 1183
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 206/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+ND+G PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 282 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLG 526
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958
>gi|410952030|ref|XP_003982692.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Felis catus]
Length = 1181
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 208/496 (41%), Gaps = 57/496 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D + C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGSLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 467
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 468 EWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-K 524
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NIN 237
P+ + P + + C + L + W D EL +
Sbjct: 525 DPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------DNGELPSDGRFT 576
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQV 287
+D LE+ + +D G Y CV +T+ +S + V P P P +++
Sbjct: 577 VDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 345
+ S + WT G N PIT + I + W + +E +
Sbjct: 637 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQT 686
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ + L P+ Y F+V+A N LG PS PS QY T A +P P+ + G G + +L I
Sbjct: 687 TAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVI 746
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 747 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGTPTF--VPYLIK 801
Query: 465 VQAINDVGPGPESEVV 480
VQA+NDVG PE VV
Sbjct: 802 VQALNDVGFAPEPAVV 817
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP +R F ++ T++ + E D YQ
Sbjct: 269 LSLECIAEGLPTPVIYWIKE-----DGTLP---TNRTFYRNFKKTLQIIQVSEADSGNYQ 320
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G ++ C PKP+ W
Sbjct: 321 CIAKNALGAIHHTISVTV-KAAPYWILAPQNLVLSPGEDG--SLICRANGNPKPRISWLS 377
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 378 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 433
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + G+ +++ +
Sbjct: 434 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK-GSALRDDIYVLH 486
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
N G LEI A G Y CV ++ +G + + ++ P
Sbjct: 487 EN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 111/296 (37%), Gaps = 28/296 (9%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T V P P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPLGLP 174
Query: 118 KPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRLI 175
P W + + R NG+L S V +D+ Y C A H + + I
Sbjct: 175 PPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPI 234
Query: 176 ---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVRI 223
V+ E+ P +T + + L L C A E L W
Sbjct: 235 SVKVISAKPNRERPPTFLTPEGNTSNKEELRGNVLSLECIA--EGLPTPVIYWIKED--- 289
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 GTLPTNRTFYRNFK---KTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAP 342
>gi|395838782|ref|XP_003792285.1| PREDICTED: neurofascin isoform 2 [Otolemur garnettii]
Length = 1261
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 379 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 429
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 430 NTSNEHGYLLANAFVSVLDVPPRMMS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 488
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 489 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 545
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IG+ E ++
Sbjct: 546 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGSRMKKEDDS-------- 597
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y CV + + + K + V +G P P ++
Sbjct: 598 -LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQVTPTNRLAALPKGRPDRPRDLE 656
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 657 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 709
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 710 VLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 768
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + N + R + Y YE++
Sbjct: 769 WTPMNATSAFGPNLRYIVKWRRR-------ETREAWSNATVWGSRYVVGQTPVYVPYEIR 821
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE + V
Sbjct: 822 VQAENDFGKGPEPDTV 837
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 120/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 74 VDPRDNILIECEAKGNPAPSFQWTRNSRYFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 130
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 131 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 189
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V + D YSC A H + +
Sbjct: 190 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMQQDMQTDYSCNARFHFTHTIQQKNP 249
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 250 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 305
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 306 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 358
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 284 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 336
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 337 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 393
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 394 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 447
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 448 -DVPPR--MMSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 501
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 502 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 542
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 232 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 291
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 292 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 349
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 350 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 404
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 405 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 453
>gi|40254254|ref|NP_766388.2| protein sidekick-2 precursor [Mus musculus]
gi|81893041|sp|Q6V4S5.1|SDK2_MOUSE RecName: Full=Protein sidekick-2; Flags: Precursor
gi|34101308|gb|AAQ57661.1| sidekick 2 [Mus musculus]
Length = 2176
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 209/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ L+ L Q D L I L P+ D M QC A N
Sbjct: 334 CRAKGVPPPSITWYKDAALVEVGKLTRFKQR----SDGGLQISGLLPD-DTGMLQCFAHN 388
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 389 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 446
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 447 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 506 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 559
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + V + + + W
Sbjct: 560 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKP 619
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y + N N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 620 FDGNSPLMRYVLEMSEN-NAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFR 668
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 669 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 728
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 729 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 783
Query: 478 EVVTIW 483
VT W
Sbjct: 784 SKVTEW 789
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 136/385 (35%), Gaps = 52/385 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 48 LVLTCMAEGSWPLEFKWLHNNRELTRFSL----EYRYMITSLDRT--------HAGFYRC 95
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+N++ + SF++ GE V + P+P+ W +D
Sbjct: 96 IVRNRMGALLQRQTEVQVAYMGSFEEGEKRQSVNHGEAA-VIRAPRISSFPRPQVTWFRD 154
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPS 181
G I R I L+I D+G Y A N D + I L GP+
Sbjct: 155 GRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPA 214
Query: 182 YYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELET 233
I +A + + C A+ L+ + +W +G + G D N
Sbjct: 215 DPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPLSSGISDYNR--- 271
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
L I N + +DAG YEC + S+V ++ + V PP V+ E
Sbjct: 272 --------RLTIANPTVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQF---VREPER 320
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V ++ R+ R + ++ +
Sbjct: 321 HITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVGKLTRFKQRSDGGLQIS 372
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSS 374
L+P T + A N G + S+
Sbjct: 373 GLLPDDTGMLQCFAHNAAGEAQTST 397
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 951 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1007
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + + +G E D +
Sbjct: 1008 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQ--LGNEPDA----RSME 1061
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1062 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLR 1120
Query: 407 WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 457
W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 1121 WMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIEDLEE 1171
Query: 458 YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1172 WTEYRVQVQAFNAIGSGPWSQAV 1194
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1836 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1892
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1893 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1926
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1406 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1464
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1465 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1512
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1513 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1572
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1573 SLYSMRNLTRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLS 1615
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1599 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1657
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1658 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1712
Query: 474 GPES 477
GP S
Sbjct: 1713 GPRS 1716
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 1305 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1363
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
Y + L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1364 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1415
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1416 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1473
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1474 --TSYKFRVKATNDIG 1487
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI R++ + +
Sbjct: 1096 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 1153
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1154 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1205
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1206 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1264
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1265 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1293
>gi|296209983|ref|XP_002751798.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Callithrix
jacchus]
Length = 1183
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 205/482 (42%), Gaps = 39/482 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVITNRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM ++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKD-----NEELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + + S D+G Y CV +T+ +S + V P P +++ + S + WT
Sbjct: 594 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVTAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEPA 818
Query: 479 VV 480
VV
Sbjct: 819 VV 820
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + +L + ++ Y L I +++ E D YQC
Sbjct: 282 LLLECIAEGLPTPLIYWAKEDGILPT------NRTSYKNFKKTLQITHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + +R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + ++ P
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 539
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 105 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 279 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 336
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 282 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG VQV V+ T A + W + G + Y+I NS N I K++
Sbjct: 833 PGNVQVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 889
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 890 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLKIVNP 947
Query: 399 KIGDLSISWEP 409
+ L++ W+P
Sbjct: 948 TLDSLTLEWDP 958
>gi|426224677|ref|XP_004006495.1| PREDICTED: contactin-1 isoform 4 [Ovis aries]
gi|426224679|ref|XP_004006496.1| PREDICTED: contactin-1 isoform 5 [Ovis aries]
Length = 627
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 136/278 (48%), Gaps = 18/278 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+W K + + R I+E+G+L I+ ++R D G+Y+C N G S G L++ P
Sbjct: 446 FLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G L I NA AG Y C ++ V S ++V G
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 602
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENNRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHRGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 118/322 (36%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W N ++ + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS------DRYSMVGGNLVINNPDKQKDAGI 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 112 YYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D+ + +
Sbjct: 229 LIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMP----- 283
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 284 ----STAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCVAT-GKPI 359
>gi|410952032|ref|XP_003982693.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Felis catus]
Length = 1193
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 208/496 (41%), Gaps = 57/496 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D + C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGSLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 467
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 468 EWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-K 524
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NIN 237
P+ + P + + C + L + W D EL +
Sbjct: 525 DPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------DNGELPSDGRFT 576
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQV 287
+D LE+ + +D G Y CV +T+ +S + V P P P +++
Sbjct: 577 VDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 345
+ S + WT G N PIT + I + W + +E +
Sbjct: 637 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQT 686
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ + L P+ Y F+V+A N LG PS PS QY T A +P P+ + G G + +L I
Sbjct: 687 TAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVI 746
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 747 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGTPTF--VPYLIK 801
Query: 465 VQAINDVGPGPESEVV 480
VQA+NDVG PE VV
Sbjct: 802 VQALNDVGFAPEPAVV 817
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP +R F ++ T++ + E D YQ
Sbjct: 269 LSLECIAEGLPTPVIYWIKE-----DGTLP---TNRTFYRNFKKTLQIIQVSEADSGNYQ 320
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G ++ C PKP+ W
Sbjct: 321 CIAKNALGAIHHTISVTV-KAAPYWILAPQNLVLSPGEDG--SLICRANGNPKPRISWLS 377
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 378 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 433
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + G+ +++ +
Sbjct: 434 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEWFKGAK-GSALRDDIYVLH 486
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
N G LEI A G Y CV ++ +G + + ++ P
Sbjct: 487 EN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 111/296 (37%), Gaps = 28/296 (9%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T V P P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLVLPCRPPLGLP 174
Query: 118 KPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRLI 175
P W + + R NG+L S V +D+ Y C A H + + I
Sbjct: 175 PPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPI 234
Query: 176 ---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVRI 223
V+ E+ P +T + + L L C A E L W
Sbjct: 235 SVKVISAKPNRERPPTFLTPEGNTSNKEELRGNVLSLECIA--EGLPTPVIYWIKED--- 289
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 GTLPTNRTFYRNFK---KTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAP 342
>gi|237858652|ref|NP_001153796.1| neurofascin isoform 8 precursor [Gallus gallus]
Length = 1064
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 218/498 (43%), Gaps = 62/498 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLE----DQDRYFIQDNVLTIRYLNPE-RD 60
D C A G P + W NGE P+E + R D TI + + +
Sbjct: 354 DGRLVCRANGNPKPSIQWLVNGE-------PIEGSPPNPSREVAGD---TIVFRDTQIGS 403
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
A+YQC A N+ ++A + VL + P P + + C +P P
Sbjct: 404 SAVYQCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPT 462
Query: 121 FVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V
Sbjct: 463 LRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-K 520
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNI 236
P+ + P + +L C + L + W + + IGN E
Sbjct: 521 DPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE------ 574
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------EGPPGLPGG 284
D GL I + D G+Y CV + + K S K + V + P P
Sbjct: 575 --DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRD 631
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGR 342
+++ ++ + S + W G N PIT Y + + TW N S RY G
Sbjct: 632 LELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGN 682
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
+++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + +
Sbjct: 683 VNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNN 741
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+ I+W PL + PN+ Y + WR+++ + +ET+K +V V P Y Y
Sbjct: 742 MEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPY 795
Query: 462 EVKVQAINDVGPGPESEV 479
E+KVQA ND G PE E
Sbjct: 796 EIKVQAENDFGRAPEPET 813
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA----------TNV 164
P ++ ++ I R +NG+L S V D+ YSC A N
Sbjct: 170 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVR 222
+ + R + PS+ + R +L L C A D+ +W G
Sbjct: 230 YTLKVKTTRGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDI--MWYKKG-- 285
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + + + N N L I+N S D+GEY C+ + +G I +V V+ P
Sbjct: 286 -GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 338
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 262 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 321
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 322 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 378
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 379 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 431
>gi|410952028|ref|XP_003982691.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Felis catus]
Length = 1212
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 208/496 (41%), Gaps = 57/496 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D + C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGSLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 486
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 487 EWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-K 543
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NIN 237
P+ + P + + C + L + W D EL +
Sbjct: 544 DPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------DNGELPSDGRFT 595
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQV 287
+D LE+ + +D G Y CV +T+ +S + V P P P +++
Sbjct: 596 VDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIYDVPNPPFDLEL 655
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 345
+ S + WT G N PIT + I + W + +E +
Sbjct: 656 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQT 705
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ + L P+ Y F+V+A N LG PS PS QY T A +P P+ + G G + +L I
Sbjct: 706 TAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLVI 765
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 766 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGTPTF--VPYLIK 820
Query: 465 VQAINDVGPGPESEVV 480
VQA+NDVG PE VV
Sbjct: 821 VQALNDVGFAPEPAVV 836
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 19/264 (7%)
Query: 26 NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS--AQLRV 83
NG+L S LP + ++ Y + + ++ P + + ++L ++ +
Sbjct: 199 NGDLYFSNVLPEDTREDYICYARFNHTQTIQ-QKQPISVKVISVDELNDTIAANLSDTEF 257
Query: 84 LTLKPSFKKRPL----ESETYAGE---GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGR 135
+ KP+ ++ P E T E G +++ C E P P W K+DG + +
Sbjct: 258 YSAKPNRERPPTFLTPEGNTSNKEELRGNVLSLECIAEGLPTPVIYWIKEDGTLPTNRTF 317
Query: 136 RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 195
+ F+ L I VS DSG Y C A N G + V P Y+ P + ++
Sbjct: 318 YRNFKK-TLQIIQVSEADSGNYQCIAKNALGAIHHTISVTVKAAP-YWILAPQNLVLSPG 375
Query: 196 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 255
+ L C A+ ++ W NGV I + P+ IDG + +N +
Sbjct: 376 EDGSLICRANGNPKPRIS--WLSNGVPIEIAP----DDPSRKIDGDTIIFSNVQERSSAV 429
Query: 256 YECVVKSTVGKISTKTTVIVEGPP 279
Y+C + G + V V P
Sbjct: 430 YQCNASNEYGYLLANAFVNVLAEP 453
>gi|53729306|ref|NP_001004493.1| neurofascin isoform 2 precursor [Gallus gallus]
Length = 1272
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 216/494 (43%), Gaps = 54/494 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMY 64
D C A G P + W NGE + + R D TI + + + A+Y
Sbjct: 371 DGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL + P P + + C +P P W
Sbjct: 425 QCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWF 483
Query: 125 KDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 484 KNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTR 541
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDG 240
+ P + +L C + L + W + + IGN E D
Sbjct: 542 IVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DD 593
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------EGPPGLPGGVQVV 288
GL I + D G+Y CV + + K S K + V + P P +++
Sbjct: 594 GLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELS 652
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + S + W G N PIT Y + + TW N S RY G ++
Sbjct: 653 DLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSA 703
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+
Sbjct: 704 LLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEIT 762
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+KV
Sbjct: 763 WTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKV 816
Query: 466 QAINDVGPGPESEV 479
QA ND G PE E
Sbjct: 817 QAENDFGRAPEPET 830
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 186/500 (37%), Gaps = 89/500 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L + LE+ ++ NV E D Y
Sbjct: 281 DLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNV-------SEEDSGEYF 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 334 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPSIQWLV 390
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I E I V RD S +Y C A+N HG + + VL
Sbjct: 391 NGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 444
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+I A RN ++ + LD + W NG GNM L+
Sbjct: 445 ---DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQ--GNM----LDG 493
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
N + G LE++ A D G Y CV + +GK+ + + V+ P + G + V +
Sbjct: 494 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKR 553
Query: 293 TSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
S P H ++ TW + + Y G + ++
Sbjct: 554 GSM------------PRLHCRVKHDPTLKLTVTW-------LKDDAPLYIGNRMKKEDDG 594
Query: 351 LVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPA----DKPYQAPSRIGGGGGKIG 401
L + E + +A EL + PA D P + P R ++
Sbjct: 595 LTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDR--PRDLELS 652
Query: 402 DLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GNVGIAVVRI 452
DL+ ++W +P + N+P Y + + + FQ T + GNV A++ +
Sbjct: 653 DLAERSVKLTW--IPGDDNNSPITDYIVQFE---EDRFQPGTWHNHSRYPGNVNSALLSL 707
Query: 453 PSEFYYTEYEVKVQAINDVG 472
Y Y+ +V A+NDVG
Sbjct: 708 SP---YVNYQFRVIAVNDVG 724
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P ++ ++ I R +NG+L S V D+ YSC A
Sbjct: 170 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 162 -------------TNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAH 205
T++ D R + PS+ + R +L L C A
Sbjct: 230 YTLKVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIAS 289
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
D+ +W G G + + + N N L I+N S D+GEY C+ + +G
Sbjct: 290 GVPAPDI--MWYKKG---GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMG 341
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 342 SIRHTISVRVKAAP 355
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 396 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 450
>gi|63660|emb|CAA46330.1| neurofascin [Gallus gallus]
Length = 1272
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 216/494 (43%), Gaps = 54/494 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMY 64
D C A G P + W NGE + + R D TI + + + A+Y
Sbjct: 371 DGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL + P P + + C +P P W
Sbjct: 425 QCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWF 483
Query: 125 KDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 484 KNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTR 541
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDG 240
+ P + +L C + L + W + + IGN E D
Sbjct: 542 IVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DD 593
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------EGPPGLPGGVQVV 288
GL I + D G+Y CV + + K S K + V + P P +++
Sbjct: 594 GLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELS 652
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + S + W G N PIT Y + + TW N S RY G ++
Sbjct: 653 DLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSA 703
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+
Sbjct: 704 LLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEIT 762
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+KV
Sbjct: 763 WTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKV 816
Query: 466 QAINDVGPGPESEV 479
QA ND G PE E
Sbjct: 817 QAENDFGRAPEPET 830
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 186/500 (37%), Gaps = 89/500 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L + LE+ ++ NV E D Y
Sbjct: 281 DLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNV-------SEEDSGEYF 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 334 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPSIQWLV 390
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I E I V RD S +Y C A+N HG + + VL
Sbjct: 391 NGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 444
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+I A RN ++ + LD + W NG GNM L+
Sbjct: 445 ---DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQ--GNM----LDG 493
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
N + G LE++ A D G Y CV + +GK+ + + V+ P + G + V +
Sbjct: 494 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKR 553
Query: 293 TSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
S P H ++ TW + + Y G + ++
Sbjct: 554 GSM------------PRLHCRVKHDPTLKLTVTW-------LKDDAPLYIGNRMKKEDDG 594
Query: 351 LVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPA----DKPYQAPSRIGGGGGKIG 401
L + E + +A EL + PA D P + P R ++
Sbjct: 595 LTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDR--PRDLELS 652
Query: 402 DLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GNVGIAVVRI 452
DL+ ++W +P + N+P Y + + + FQ T + GNV A++ +
Sbjct: 653 DLAERSVKLTW--IPGDDNNSPITDYIVQFE---EDRFQPGTWHNHSRYPGNVNSALLSL 707
Query: 453 PSEFYYTEYEVKVQAINDVG 472
Y Y+ +V A+NDVG
Sbjct: 708 SP---YVNYQFRVIAVNDVG 724
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P ++ ++ I R +NG+L S V D+ YSC A
Sbjct: 170 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 162 -------------TNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAH 205
T++ D R + PS+ + R +L L C A
Sbjct: 230 YTLKVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIAS 289
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
D+ +W G G + + + N N L I+N S D+GEY C+ + +G
Sbjct: 290 GVPAPDI--MWYKKG---GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMG 341
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 342 SIRHTISVRVKAAP 355
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 396 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 450
>gi|237858643|ref|NP_001153793.1| neurofascin isoform 5 precursor [Gallus gallus]
Length = 1069
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 216/494 (43%), Gaps = 54/494 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMY 64
D C A G P + W NGE + + R D TI + + + A+Y
Sbjct: 354 DGRLVCRANGNPKPSIQWLVNGEPIEGSP---PNPSREVAGD---TIVFRDTQIGSSAVY 407
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL + P P + + C +P P W
Sbjct: 408 QCNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWF 466
Query: 125 KDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 467 KNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTR 524
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDG 240
+ P + +L C + L + W + + IGN E D
Sbjct: 525 IVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DD 576
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------EGPPGLPGGVQVV 288
GL I + D G+Y CV + + K S K + V + P P +++
Sbjct: 577 GLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELS 635
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + S + W G N PIT Y + + TW N S RY G ++
Sbjct: 636 DLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSA 686
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+
Sbjct: 687 LLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEIT 745
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+KV
Sbjct: 746 WTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKV 799
Query: 466 QAINDVGPGPESEV 479
QA ND G PE E
Sbjct: 800 QAENDFGRAPEPET 813
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA----------TNV 164
P ++ ++ I R +NG+L S V D+ YSC A N
Sbjct: 170 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVR 222
+ + R + PS+ + R +L L C A D+ +W G
Sbjct: 230 YTLKVKTTRGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDI--MWYKKG-- 285
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + + + N N L I+N S D+GEY C+ + +G I +V V+ P
Sbjct: 286 -GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 338
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 262 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 321
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 322 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 378
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 379 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 431
>gi|38372283|sp|O42414.1|NFASC_CHICK RecName: Full=Neurofascin; Flags: Precursor
gi|2467122|emb|CAA74726.1| neurofascin [Gallus gallus]
Length = 1369
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 217/493 (44%), Gaps = 62/493 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLE----DQDRYFIQDNVLTIRYLNPE-RDPAMYQ 65
C A G P + W NGE P+E + R D TI + + + A+YQ
Sbjct: 376 CRANGNPKPSIQWLVNGE-------PIEGSPPNPSREVAGD---TIVFRDTQIGSSAVYQ 425
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL + P P + + C +P P W K
Sbjct: 426 CNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFK 484
Query: 126 DG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 485 NGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRI 542
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
+ P + +L C + L + W + + IGN E D G
Sbjct: 543 VRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DDG 594
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------EGPPGLPGGVQVVE 289
L I + D G+Y CV + + K S K + V + P P +++ +
Sbjct: 595 LT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSD 653
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + S + W G N PIT Y + + TW N S RY G +++
Sbjct: 654 LAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSAL 704
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+W
Sbjct: 705 LS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITW 763
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+KVQ
Sbjct: 764 TPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQ 817
Query: 467 AINDVGPGPESEV 479
A ND G PE E
Sbjct: 818 AENDFGRAPEPET 830
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 186/500 (37%), Gaps = 89/500 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L + LE+ ++ NV E D Y
Sbjct: 281 DLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNV-------SEEDSGEYF 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 334 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPSIQWLV 390
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I E I V RD S +Y C A+N HG + + VL
Sbjct: 391 NGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 444
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+ I A RN ++ + LD + W NG GNM L+
Sbjct: 445 ---DVPPR--ILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQ--GNM----LDG 493
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
N + G LE++ A D G Y CV + +GK+ + + V+ P + G + V +
Sbjct: 494 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKR 553
Query: 293 TSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
S P H ++ TW + + Y G + ++
Sbjct: 554 GSM------------PRLHCRVKHDPTLKLTVTW-------LKDDAPLYIGNRMKKEDDG 594
Query: 351 LVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPA----DKPYQAPSRIGGGGGKIG 401
L + E + +A EL + PA D P + P R ++
Sbjct: 595 LTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDR--PRDLELS 652
Query: 402 DLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GNVGIAVVRI 452
DL+ ++W +P + N+P Y + + + FQ T + GNV A++ +
Sbjct: 653 DLAERSVKLTW--IPGDDNNSPITDYIVQFE---EDRFQPGTWHNHSRYPGNVNSALLSL 707
Query: 453 PSEFYYTEYEVKVQAINDVG 472
Y Y+ +V A+NDVG
Sbjct: 708 SP---YVNYQFRVIAVNDVG 724
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P ++ ++ I R +NG+L S V D+ YSC A
Sbjct: 170 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 162 -------------TNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAH 205
T++ D R + PS+ + R +L L C A
Sbjct: 230 YTLKVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIAS 289
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
D+ +W G G + + + N N L I+N S D+GEY C+ + +G
Sbjct: 290 GVPAPDI--MWYKKG---GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMG 341
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 342 SIRHTISVRVKAAP 355
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 396 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 450
>gi|402864553|ref|XP_003896524.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Papio anubis]
Length = 1180
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 806 NDVGFAPEPAVV 817
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A ++W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|332237970|ref|XP_003268177.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Nomascus
leucogenys]
Length = 1211
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 209/493 (42%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPSDE--RFTVDRD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVVT 481
ND+G PE VVT
Sbjct: 825 NDMGFAPEPAVVT 837
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIVHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|332237964|ref|XP_003268174.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Nomascus
leucogenys]
Length = 1180
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 209/493 (42%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPSDE--RFTVDRD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVVT 481
ND+G PE VVT
Sbjct: 806 NDMGFAPEPAVVT 818
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIVHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|237858646|ref|NP_001153794.1| neurofascin isoform 6 precursor [Gallus gallus]
Length = 1235
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 217/493 (44%), Gaps = 62/493 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLE----DQDRYFIQDNVLTIRYLNPE-RDPAMYQ 65
C A G P + W NGE P+E + R D TI + + + A+YQ
Sbjct: 359 CRANGNPKPSIQWLVNGE-------PIEGSPPNPSREVAGD---TIVFRDTQIGSSAVYQ 408
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL + P P + + C +P P W K
Sbjct: 409 CNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFK 467
Query: 126 DG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 NGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRI 525
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
+ P + +L C + L + W + + IGN E D G
Sbjct: 526 VRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DDG 577
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------EGPPGLPGGVQVVE 289
L I + D G+Y CV + + K S K + V + P P +++ +
Sbjct: 578 LT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSD 636
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + S + W G N PIT Y + + TW N S RY G +++
Sbjct: 637 LAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSAL 687
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+W
Sbjct: 688 LS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITW 746
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+KVQ
Sbjct: 747 TPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQ 800
Query: 467 AINDVGPGPESEV 479
A ND G PE E
Sbjct: 801 AENDFGRAPEPET 813
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA----------TNV 164
P ++ ++ I R +NG+L S V D+ YSC A N
Sbjct: 170 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVR 222
+ + R + PS+ + R +L L C A D+ +W G
Sbjct: 230 YTLKVKTTRGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDI--MWYKKG-- 285
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + + + N N L I+N S D+GEY C+ + +G I +V V+ P
Sbjct: 286 -GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 338
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 262 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 321
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 322 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 378
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 379 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 433
>gi|297289130|ref|XP_002803475.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Macaca
mulatta]
gi|387539346|gb|AFJ70300.1| neuronal cell adhesion molecule isoform D precursor [Macaca
mulatta]
Length = 1211
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W P
Sbjct: 960 IVNPTLDSLTLEWHP 974
>gi|402864559|ref|XP_003896527.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Papio anubis]
Length = 1211
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A ++W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|37360422|dbj|BAC98189.1| mKIAA1514 protein [Mus musculus]
Length = 1994
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 209/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ L+ L Q D L I L P+ D M QC A N
Sbjct: 152 CRAKGVPPPSITWYKDAALVEVGKLTRFKQR----SDGGLQISGLLPD-DTGMLQCFAHN 206
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 207 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 264
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 265 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 323
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 324 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 377
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + V + + + W
Sbjct: 378 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKP 437
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y + N N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 438 FDGNSPLMRYVLEMSEN-NAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFR 486
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 487 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 546
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 547 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 601
Query: 478 EVVTIW 483
VT W
Sbjct: 602 SKVTEW 607
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 111/280 (39%), Gaps = 27/280 (9%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDP 61
+++T C A P + W ++G L+S + D +R LTI NP D
Sbjct: 53 SEVTMECVANARPLIKLHIVWKKDGAPLSSG---ISDYNRR------LTI--ANPTVSDA 101
Query: 62 AMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
Y+C A + + A L VL P F + P E A V I C + P
Sbjct: 102 GYYECEAMLRSSSVAPVTRGAYLSVLE-PPQFVREP-ERHITAEMEKVVDIPCRAKGVPP 159
Query: 119 PKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KD + +G R K +G L IS + DD+G+ C A N G ++ L V
Sbjct: 160 PSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAV 219
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P T+ ++ L C T A W G RI + ++ P
Sbjct: 220 TSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRF 274
Query: 237 N-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 275 TLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 314
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 769 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 825
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + + +G E D +
Sbjct: 826 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLI--YQLGNEPDA----RSME 879
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 880 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLR 938
Query: 407 WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 457
W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 939 WMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIEDLEE 989
Query: 458 YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 990 WTEYRVQVQAFNAIGSGPWSQAV 1012
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1654 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1710
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1711 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1744
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1224 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1282
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1283 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1330
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1331 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1390
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1391 SLYSMRNLTRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLS 1433
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1417 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1475
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1476 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1530
Query: 474 GPES 477
GP S
Sbjct: 1531 GPRS 1534
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 1123 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1181
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
Y + L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1182 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1233
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1234 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1291
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1292 --TSYKFRVKATNDIG 1305
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI R++ + +
Sbjct: 914 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 971
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 972 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1023
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1024 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1082
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1083 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1111
>gi|449667583|ref|XP_002165052.2| PREDICTED: contactin-4-like [Hydra magnipapillata]
Length = 1330
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 202/491 (41%), Gaps = 59/491 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-----QDNVLTIRYLNPERDPAMYQ 65
C A G P + W+ N S L ++D R + Q +VL+ + D +Y
Sbjct: 393 CNASGFPVPKFEWYHN-----STQLSVKDARRSWTENTDNQGSVLSFTKM-AFSDNGIYI 446
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N T S ++V + P F+ P+E Y ++ I C+P A P P F W K
Sbjct: 447 CIAINSQDTITQSTFIKVRAMAPLFEI-PVEDPIYLFRTADMMIHCSPSAGPIPTFTWSK 505
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
D +I GGR ++ NG LLI V DSG+Y C+A N G ES+G IVL P+
Sbjct: 506 DNVVIADGGRYTVYSNGTLLIKGVLATDSGLYKCSAENPLGKAESQGTAIVLE-PTVITH 564
Query: 186 LP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P + +QL C A + L++ W GVR+ D +L
Sbjct: 565 PPISQGHQIGFYGIQLFCGASWDTRLELRIEWYKGGVRMAKFDDRIYIEKRSAGPPRILY 624
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVI----VEGPPGLPGGVQVV-EVHKTSATIQW 299
I N + DAG Y C + VG + ++ T V GPP P GV+V A IQW
Sbjct: 625 INNLTIDDAGNYSCHAFTKVGNVVSEQTAFAILTVRGPPQPPAGVRVTGNCGNYDALIQW 684
Query: 300 TDGATNGRPITHYKIIARTN---WNSTWFNVSEHVIGKEVDRYTGRKEASIENVL---VP 353
T G G + + TN N W Y G + N L P
Sbjct: 685 TRGEELGAETRGFSVEFSTNVTAANGIW--------------YGGIGDFLNPNQLYHAYP 730
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI-GDLSISWEPLPR 412
+ FK+ N + P+P N P + G + G L ISW +
Sbjct: 731 GTRISFKLTRENLV-------PAPPMN---------PLNVTGITKMMPGVLFISWTAITD 774
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
AP+ +Y++ +R F T+ + ++ + +IP+ EYE VQ+ N +G
Sbjct: 775 VYYGAPDFFYEVGFRLVGAPSF---TVNQIRDLNVTEFQIPTPGINKEYEFYVQSKNSLG 831
Query: 473 PGPESEVVTIW 483
GP + VT +
Sbjct: 832 EGPPYKTVTAF 842
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 91/230 (39%), Gaps = 20/230 (8%)
Query: 65 QCRAKNQLKTRYSSAQL-------RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+C N TR+S+ Q+ + T KP L+ + A ++ C P
Sbjct: 240 RCILMNYGLTRFSNQQVLYESYDNKQETRKPELLAL-LDPQMIAPIESTYSMICGALGFP 298
Query: 118 KPKFVWKKDGN---IIGSGGRRKIFENGNLL-------ISPVSRDDSGIYSCTATNVHGM 167
P + W+ G + GG FE L I V++ G + C A+N G
Sbjct: 299 VPTYRWEYQGVELVPLRPGGNELNFEFFEFLPNRLELRIRRVTQYSGGTFKCYASNSLGE 358
Query: 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G+L V P + P +I + ++RC+A + + W HN ++ D
Sbjct: 359 IWTIGQLSVAFPPVFNIFFPDEINVPFENAFEIRCNASGFPV--PKFEWYHNSTQLSVKD 416
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
T N + G +L T +F+D G Y C+ ++ I+ T + V
Sbjct: 417 ARRSWTENTDNQGSVLSFTKMAFSDNGIYICIAINSQDTITQSTFIKVRA 466
>gi|380798931|gb|AFE71341.1| neuronal cell adhesion molecule isoform A precursor, partial
[Macaca mulatta]
Length = 1278
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 351 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 404
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 405 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 463
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 464 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 520
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 521 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 573
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 574 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 633
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 634 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 683
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 684 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 743
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 744 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 798
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 799 NDVGFAPEPAVV 810
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 262 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 314
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 315 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 371
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 372 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 430
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 431 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 481
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 482 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 519
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 823 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 875
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 876 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 933
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W P
Sbjct: 934 IVNPTLDSLTLEWHP 948
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 32 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 88
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 89 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 147
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 148 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 207
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 208 ISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 267
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+I + S AD+G Y+C+ K+
Sbjct: 268 A--EGLPTPIIYWAKED---GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNA 319
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 320 LGAIHHTISVRVKAAP 335
>gi|297289128|ref|XP_002803474.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Macaca
mulatta]
gi|387539344|gb|AFJ70299.1| neuronal cell adhesion molecule isoform A precursor [Macaca
mulatta]
Length = 1304
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W P
Sbjct: 960 IVNPTLDSLTLEWHP 974
>gi|380798907|gb|AFE71329.1| neuronal cell adhesion molecule isoform D precursor, partial
[Macaca mulatta]
Length = 1185
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 351 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 404
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 405 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 463
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 464 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 520
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 521 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 573
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 574 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 633
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 634 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 683
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 684 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 743
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 744 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 798
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 799 NDVGFAPEPAVV 810
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 262 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 314
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 315 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 371
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 372 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 430
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 431 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 481
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 482 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 519
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 823 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 875
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 876 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 933
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W P
Sbjct: 934 IVNPTLDSLTLEWHP 948
>gi|431839377|gb|ELK01303.1| Neuronal cell adhesion molecule [Pteropus alecto]
Length = 1210
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 206/483 (42%), Gaps = 48/483 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D C A G+P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGALICRANGIPKPRISWLLNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 480
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ RL +
Sbjct: 481 EWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGSYTCVARNKLGMAKNEVRLEI-K 537
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P+ + P + + C + L W + + N +
Sbjct: 538 DPTRIIKQPEYAIVQRGSTVSFECRVKHDHTLIPTVTWLKDNGELPN-------DGRFTV 590
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
D L I + S D G Y CV +T+ +S + V P P +++ + S +
Sbjct: 591 DKDHLVIADVSDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDKSVQLS 650
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
WT G N PIT+ A W + +E V G + + + L P+ Y
Sbjct: 651 WTPGDDNNSPITNAMHEA-----GLWHHQTE-VPGTQT---------TAQLKLSPYVNYS 695
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V+A N LG PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 696 FRVMAENSLGRSLPSEVSEQYLTKAAEPDKNPTTVEGLGSEPDNLVITWKPLNGFESNGP 755
Query: 419 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 756 GLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEP 810
Query: 478 EVV 480
VV
Sbjct: 811 PVV 813
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 337
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NALGAIYHTISVTVKAAP-YWIMAPQNLVLSPGEDGALICRANGIPKPRIS--WLLNGVP 394
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
PG V V V+ T A ++W PI ++K + N I K++ + G
Sbjct: 826 PGNVHVNVVNSTLAEVRWD-------PIYYWKAQNSSKRN-------RRHIEKKILTFQG 871
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
K + L P+S Y V N G G P+SP +NTP P APS + +
Sbjct: 872 SKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLKIVNPTLD 929
Query: 402 DLSISWEP 409
L++ W+P
Sbjct: 930 SLTLEWDP 937
>gi|402864561|ref|XP_003896528.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Papio anubis]
Length = 1304
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A ++W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|387539342|gb|AFJ70298.1| neuronal cell adhesion molecule isoform E precursor [Macaca
mulatta]
Length = 1192
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 806 NDVGFAPEPAVV 817
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W P
Sbjct: 941 IVNPTLDSLTLEWHP 955
>gi|380798909|gb|AFE71330.1| neuronal cell adhesion molecule isoform E precursor, partial
[Macaca mulatta]
Length = 1166
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 332 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 385
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 386 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 444
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 445 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 501
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 502 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 554
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 555 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 614
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 615 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 664
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 665 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 724
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 725 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 779
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 780 NDVGFAPEPAVV 791
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 243 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 295
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 296 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 352
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 353 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 411
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 412 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 462
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 463 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 500
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 32 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 88
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 89 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 147
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 148 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 207
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 208 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 263
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 264 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 316
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 804 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 856
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 857 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 914
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W P
Sbjct: 915 IVNPTLDSLTLEWHP 929
>gi|47224417|emb|CAG08667.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1301
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 212/495 (42%), Gaps = 52/495 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
TC A G P + +W NG ++ E P + + ++D+ + + A+YQC
Sbjct: 362 TCRASGTPKPSITWAMNG--ISIENAPADPSRK--VEDDTIIFTDVQTGSS-AVYQCNVS 416
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+A + VL+ P P + I C +P PK W KD
Sbjct: 417 NDYGYLLSNAFVNVLSEPPRVLT-PANKVYQVIKNQRALIDCASFGSPIPKITWFKDSRS 475
Query: 130 IGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G I +NG L + +SG Y+C A N G+ E+ L V P+ + P
Sbjct: 476 STLDGHPYIIHDNGTLEMHTAQAHNSGKYTCVARNSLGIYENHVYLEVKE-PTRILKQPE 534
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ R++ C + L W + + + D I ++ L IT+
Sbjct: 535 YKVVRRGRSVVFECKVKHDPTLIPTITWLKDAGELPDDD------ERIILESDSLTITDV 588
Query: 249 SFADAGEYECVVKSTVGKIS----------TKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
+ DAG Y C+ +T+ + S T T +V P P +++ + K S +
Sbjct: 589 TENDAGVYTCITNTTLDQDSASAELTVVEATPTPAVVYEQPDPPTDLELTDQKKRSVQLT 648
Query: 299 WTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
WT G + PI + I + + W N++E V G + + L P+
Sbjct: 649 WTPGDEHNSPIQKFLIQFEDSLHHRGHWHNLTE-VPGTKTTAHLK---------LSPYVH 698
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW--------- 407
Y F+V+A N +G+ PS PS + T A P Q P+ + G G + +L ISW
Sbjct: 699 YTFRVLALNAVGFSRPSFPSRMFKTEAAAPDQNPTGVQGFGTEHNNLVISWKRTGTNELL 758
Query: 408 -EPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
+PL + N P ++YK+ WR+K+ D+E+ S T+ N V P+ + YE+KV
Sbjct: 759 SQPLSGLEANGPGLHYKVMWRQKDLDSEWTSVTVA--NNSKFIVSGTPT---FVPYELKV 813
Query: 466 QAINDVGPGPESEVV 480
QA+ND G GPE +V
Sbjct: 814 QAVNDYGAGPEPDVA 828
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 39/272 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G+P SW + S LP + R Q T+R +N E D Y+
Sbjct: 268 LEMECIAEGLPTPEISWSKV-----SGDLPAK---RTSFQHYQKTLRIVNVSESDAGEYR 319
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAAPKPKFVWK 124
C A+NQL + + + L + P + P ++ A GE G +T C PKP W
Sbjct: 320 CLARNQLGSVHHTI-LVTVKAAPYWLSGPSQNLVLAPGESGVLT--CRASGTPKPSITWA 376
Query: 125 KDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I + RK+ E+ ++ + V S +Y C +N +G S + VL
Sbjct: 377 MNGISIENAPADPSRKV-EDDTIIFTDVQTGSSAVYQCNVSNDYGYLLSNAFVNVL---- 431
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
PP++ A++ Q+ + L+D A W + R +D +
Sbjct: 432 ---SEPPRVLTPANKVYQV--IKNQRALIDCASFGSPIPKITWFKDS-RSSTLDGH---- 481
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVG 265
P I D G LE+ A ++G+Y CV ++++G
Sbjct: 482 PYIIHDNGTLEMHTAQAHNSGKYTCVARNSLG 513
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 117/313 (37%), Gaps = 44/313 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + P R V+ I + E+
Sbjct: 39 IDPRENIIIHCEAKGKPHPSFSWTRNGTHFDIDKDPNVIM-RPHSGTLVVDISRVKAEQY 97
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
+YQC A+N+ T S+ + + P + K ++ EG ++ + C P A P
Sbjct: 98 ECVYQCTARNKHGTAVSNNIVVRQSRSPLWSKEKIKP-MVVQEGVSLVLPCRPPAGLPPP 156
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA---------------T 162
++ D N + R NG+L S V R+DS Y C A
Sbjct: 157 IIFWMDNNFQRLPQSSRVSQSLNGDLYFSNVLREDSRNDYICYARFPYTQTIQQKQPITV 216
Query: 163 NVHGMDESKGRLIVLHG--------------PSYYEQLPPKITIAAHRN--LQLRCSAHT 206
V MD + L+ PS+ P + R L++ C A
Sbjct: 217 KVFTMDAINDTMAALYNDTDLFSEAPAEERKPSFLIPSGPSSSKTVLRGHVLEMECIAEG 276
Query: 207 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
++++ + + L I N S +DAGEY C+ ++ +G
Sbjct: 277 LPTPEISWSKVSGDLPAKRTSFQHYQK--------TLRIVNVSESDAGEYRCLARNQLGS 328
Query: 267 ISTKTTVIVEGPP 279
+ V V+ P
Sbjct: 329 VHHTILVTVKAAP 341
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 90/230 (39%), Gaps = 19/230 (8%)
Query: 87 KPSF--KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFEN-- 141
KPSF P S+T G + + C E P P+ W K G++ +R F++
Sbjct: 247 KPSFLIPSGPSSSKTVL-RGHVLEMECIAEGLPTPEISWSKVSGDL---PAKRTSFQHYQ 302
Query: 142 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 201
L I VS D+G Y C A N G + V P + + +A + L
Sbjct: 303 KTLRIVNVSESDAGEYRCLARNQLGSVHHTILVTVKAAPYWLSGPSQNLVLAPGESGVLT 362
Query: 202 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
C A + W NG+ I N + P+ ++ + T+ + Y+C V
Sbjct: 363 CRASGTPKPSIT--WAMNGISIENAPAD----PSRKVEDDTIIFTDVQTGSSAVYQCNVS 416
Query: 262 STVGKISTKT--TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 309
+ G + + V+ E P L +V +V K + D A+ G PI
Sbjct: 417 NDYGYLLSNAFVNVLSEPPRVLTPANKVYQVIKNQRAL--IDCASFGSPI 464
>gi|402864557|ref|XP_003896526.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Papio anubis]
Length = 1192
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 806 NDVGFAPEPAVV 817
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A ++W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|332237966|ref|XP_003268175.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Nomascus
leucogenys]
Length = 1192
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 209/493 (42%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPSDE--RFTVDRD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVVT 481
ND+G PE VVT
Sbjct: 806 NDMGFAPEPAVVT 818
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIVHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIVHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|6651381|gb|AAF22283.1|AF172277_2 NgCAM-related related cell adhesion molecule /alternative carboxyl
terminus [Homo sapiens]
Length = 1236
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 825 NDMGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|355747930|gb|EHH52427.1| hypothetical protein EGM_12865 [Macaca fascicularis]
Length = 1310
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
>gi|302191647|ref|NP_001180511.1| neuronal cell adhesion molecule isoform D precursor [Homo sapiens]
Length = 1211
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 825 NDMGFAPEPAVV 836
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|348568085|ref|XP_003469829.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Cavia
porcellus]
Length = 1183
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 206/483 (42%), Gaps = 39/483 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + +E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D+SG Y+C A N G+ +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ P + + C + L W + + N + +D
Sbjct: 541 RILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE-------RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L +T+ +D G Y CV +T+ ++S + V P P +++ + S + WT
Sbjct: 594 HLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVDVPSPPFDLELTDQLDKSVQLSWTP 653
Query: 302 GATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PIT + I + W + +E + + + L P+ Y F
Sbjct: 654 GDDNNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQTTAQLKLSPYVNYSF 703
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N P
Sbjct: 704 RVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG 763
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+N +G PE
Sbjct: 764 LQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNVMGFAPEPA 818
Query: 479 VVT 481
VVT
Sbjct: 819 VVT 821
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLIINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C P
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQPLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 168 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 175 IVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE- 232
I L S E TIAA+ + + + ++E N R + N L
Sbjct: 228 ISLKVISVDEL---NDTIAANLSDTEFYGAKSSKERPPTFLTPEGNASRKEELRGNVLSL 284
Query: 233 --------TPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
TP I DG L L+I S AD+G Y+C+ K+T+G I
Sbjct: 285 ECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIR 344
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 345 HTISVTVKAAP 355
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 13/165 (7%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 337
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 221
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 394
Query: 222 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
I D P+ IDG + +N + Y+C + G
Sbjct: 395 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQCNASNEYG 433
>gi|34922043|sp|Q98902.1|L1CAM_TAKRU RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
Short=NCAM-L1; AltName: Full=L1-CAM; Flags: Precursor
gi|1495413|emb|CAA96469.1| neural cell adhesion molecule L1 [Takifugu rubripes]
gi|3098264|gb|AAC15580.1| neural cell adhesion molecule L1 homolog [Takifugu rubripes]
Length = 1277
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 205/486 (42%), Gaps = 54/486 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETL----PLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
C+A G+P T +W NG L++ +L L + ++D + D A+YQC
Sbjct: 370 CQADGIPSPTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFG--------DTAIYQC 421
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+A N+ T ++ + V+ L P + T+ EG + C +PKPK W+
Sbjct: 422 QASNKHGTILANTNVYVIELPPQILTENGNTYTFV-EGQKALLECETFGSPKPKVTWESS 480
Query: 127 G-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHGPS 181
+++ + R + NG L I+ VS DD GIY+C + +V+ E R ++L P
Sbjct: 481 SISLLLADPRVNLLTNGGLEIANVSHDDEGIYTCLVQGSNISVNAEVEVLNRTVILSPPQ 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDG 240
P K I C T+ L + W N +I ++ T DG
Sbjct: 541 ALRLQPGKTAI-------FTCLYVTDPKLSSPLLQWRKNDQKIFESHSDKKYT----FDG 589
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I+N D G Y C + + + + +T+ + P P +QV T+ WT
Sbjct: 590 PGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTLCDRPDPPVHLQVTNAKHRVVTLNWT 649
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
G N PI Y + + W +E+ R K+ + L P+
Sbjct: 650 PGDDNNSPILEYVVEFEDQDMKENGW-------------EELKRVAADKK-HVNLPLWPY 695
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+Y F+VIA N+ G +PS S Y TPAD P P + L I+WE + +
Sbjct: 696 MSYRFRVIAINDQGKSDPSKLSDLYKTPADAPDSNPEDVRSESTDPDTLVITWEEMDKRN 755
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N P+ Y + WR+ + + +EY +V F + +E+KVQA+N G G
Sbjct: 756 FNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFIVTDVQNF--SAFEIKVQAVNKKGLG 811
Query: 475 PESEVV 480
PE + +
Sbjct: 812 PEPDPI 817
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 11/193 (5%)
Query: 93 RPLESET--YAGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPV 149
RP S + +A G + + C + P PK W +KDG + S + +F+ L + +
Sbjct: 260 RPTGSHSTYHALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRISKDMFDR-RLQFTNI 318
Query: 150 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 209
S D G Y CTA NV G + V P Y+ P A ++L C A + +
Sbjct: 319 SESDGGEYQCTAENVQGRTFHTYTVTVEASP-YWTNAPVSQLYAPGETVKLDCQA--DGI 375
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
WT NGV + LE + G L + + F D Y+C + G I
Sbjct: 376 PSPTITWTVNGVPLS---ATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILA 432
Query: 270 KTTV-IVEGPPGL 281
T V ++E PP +
Sbjct: 433 NTNVYVIELPPQI 445
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 127/304 (41%), Gaps = 51/304 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY-LNPERDP--- 61
DL CEA G P T+ W ++GE + P D + ++ ++ Y L+ D
Sbjct: 67 DLVMRCEASGNPSPTFHWTKDGEEFD----PSSDPEMKVTEEAGSSVFYTLSNTMDTLKQ 122
Query: 62 --AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y C A N+L T S+A + ++ P +K +E A G ++ + CN P+++ +
Sbjct: 123 YQGKYICYASNELGTAVSNAAVLMIDAPPVQQKEKKVTEK-AEAGHSIALSCNPPQSSMQ 181
Query: 119 PKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRLIV 176
P W + I R + ++GNL + + +DS Y+C N+ + R I+
Sbjct: 182 PIIHWMDNRLRHIRLSDRVMVGKDGNLYFANLLTEDSRNDYTC---NIQYL---ATRTIL 235
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLR-CSAHTEELLDVAYIWTHNGVRIGNMDL----NEL 231
P P + R +R +H+ T++ +R ++L L
Sbjct: 236 AKEPITLTVNPSNLVPRNRRPQMMRPTGSHS----------TYHALRGQTLELECIVQGL 285
Query: 232 ETPNIN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
TP ++ DG + L+ TN S +D GEY+C ++ G+ TV V
Sbjct: 286 PTPKVSWLRKDGEMSESRISKDMFDRRLQFTNISESDGGEYQCTAENVQGRTFHTYTVTV 345
Query: 276 EGPP 279
E P
Sbjct: 346 EASP 349
>gi|410899487|ref|XP_003963228.1| PREDICTED: neural cell adhesion molecule L1-like [Takifugu
rubripes]
Length = 1269
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 205/486 (42%), Gaps = 54/486 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETL----PLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
C+A G+P T +W NG L++ +L L + ++D + D A+YQC
Sbjct: 365 CQADGIPSPTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFG--------DTAIYQC 416
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+A N+ T ++ + V+ L P + T+ EG + C +PKPK W+
Sbjct: 417 QASNKHGTILANTNVYVIELPPQILTENGNTYTFV-EGQKALLECETFGSPKPKVTWESS 475
Query: 127 G-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHGPS 181
+++ + R + NG L I+ VS DD GIY+C + +V+ E R ++L P
Sbjct: 476 SISLLLADPRVNLLTNGGLEIANVSHDDEGIYTCLVQGSNISVNAEVEVLNRTVILSPPQ 535
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDG 240
P K I C T+ L + W N +I ++ T DG
Sbjct: 536 ALRLQPGKTAI-------FTCLYVTDPKLSSPLLQWRKNDQKIFESHSDKKYT----FDG 584
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I+N D G Y C + + + + +T+ + P P +QV T+ WT
Sbjct: 585 PGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTLCDRPDPPVHLQVTNAKHRVVTLNWT 644
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
G N PI Y + + W +E+ R K+ + L P+
Sbjct: 645 PGDDNNSPILEYVVEFEDQDMKENGW-------------EELKRVAADKK-HVNLPLWPY 690
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+Y F+VIA N+ G +PS S Y TPAD P P + L I+WE + +
Sbjct: 691 MSYRFRVIAINDQGKSDPSKLSDLYKTPADAPDSNPEDVRSESTDPDTLVITWEEMDKRN 750
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N P+ Y + WR+ + + +EY +V F + +E+KVQA+N G G
Sbjct: 751 FNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFIVTDVQNF--SAFEIKVQAVNKKGLG 806
Query: 475 PESEVV 480
PE + +
Sbjct: 807 PEPDPI 812
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 11/193 (5%)
Query: 93 RPLESET--YAGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPV 149
RP S + +A G + + C + P PK W +KDG + S + +F+ L + +
Sbjct: 255 RPTGSHSTYHALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRISKDMFDR-RLQFTNI 313
Query: 150 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 209
S D G Y CTA NV G + V P Y+ P A ++L C A + +
Sbjct: 314 SESDGGEYQCTAENVQGRTFHTYTVTVEASP-YWTNAPVSQLYAPGETVKLDCQA--DGI 370
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
WT NGV + LE + G L + + F D Y+C + G I
Sbjct: 371 PSPTITWTVNGVPLS---ATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILA 427
Query: 270 KTTV-IVEGPPGL 281
T V ++E PP +
Sbjct: 428 NTNVYVIELPPQI 440
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 127/304 (41%), Gaps = 51/304 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY-LNPERDP--- 61
DL CEA G P T+ W ++GE + P D + ++ ++ Y L+ D
Sbjct: 62 DLVMRCEASGNPSPTFHWTKDGEEFD----PSSDPEMKVTEEAGSSVFYTLSNTMDTLKQ 117
Query: 62 --AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y C A N+L T S+A + ++ P +K +E A G ++ + CN P+++ +
Sbjct: 118 YQGKYICYASNELGTAVSNAAVLMIDAPPVQQKEKKVTEK-AEAGHSIALSCNPPQSSMQ 176
Query: 119 PKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRLIV 176
P W + I R + ++GNL + + +DS Y+C N+ + R I+
Sbjct: 177 PIIHWMDNRLRHIRLSDRVMVGKDGNLYFANLLTEDSRNDYTC---NIQYL---ATRTIL 230
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLR-CSAHTEELLDVAYIWTHNGVRIGNMDL----NEL 231
P P + R +R +H+ T++ +R ++L L
Sbjct: 231 AKEPITLTVNPSNLVPRNRRPQMMRPTGSHS----------TYHALRGQTLELECIVQGL 280
Query: 232 ETPNIN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
TP ++ DG + L+ TN S +D GEY+C ++ G+ TV V
Sbjct: 281 PTPKVSWLRKDGEMSESRISKDMFDRRLQFTNISESDGGEYQCTAENVQGRTFHTYTVTV 340
Query: 276 EGPP 279
E P
Sbjct: 341 EASP 344
>gi|148702480|gb|EDL34427.1| mCG16114 [Mus musculus]
Length = 1828
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 209/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G+P + +W+++ L+ L Q D L I L P+ D M QC A N
Sbjct: 9 CRAKGIPPPSITWYKDAALVEVGKLTRFKQR----SDGGLQISGLLPD-DTGMLQCFAHN 63
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 64 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 121
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 122 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 180
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 181 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 234
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + V + + + W
Sbjct: 235 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKP 294
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y + N N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 295 FDGNSPLMRYVLEMSEN-NAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFR 343
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 344 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 403
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 404 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 458
Query: 478 EVVTIW 483
VT W
Sbjct: 459 SKVTEW 464
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1081 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1139
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1140 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1187
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1188 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1247
Query: 454 SEFYYTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1248 YLSKHRRYEIRMSIYNAVGEGPLS 1271
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 626 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 682
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + + +G E D +
Sbjct: 683 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLI--YQLGNEPDA----RSME 736
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 737 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLR 795
Query: 407 WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 457
W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 796 WMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIEDLEE 846
Query: 458 YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 847 WTEYRVQVQAFNAIGSGPWSQAV 869
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1492 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1548
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1549 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1582
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164
V I C + P P W KD + +G R K +G L IS + DD+G+ C A N
Sbjct: 5 VDIPCRAKGIPPPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNA 64
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 65 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 120
Query: 225 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 121 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 171
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1255 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1313
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1314 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1368
Query: 474 GPES 477
GP S
Sbjct: 1369 GPRS 1372
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 980 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1038
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
Y + L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1039 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1090
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1091 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1148
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1149 --TSYKFRVKATNDIG 1162
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI R++ + +
Sbjct: 771 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 828
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 829 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 880
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 881 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 939
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 940 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 968
>gi|81158226|ref|NP_001032209.1| neuronal cell adhesion molecule isoform A precursor [Homo sapiens]
gi|215274127|sp|Q92823.3|NRCAM_HUMAN RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
AltName: Full=Neuronal surface protein Bravo;
Short=hBravo; AltName: Full=NgCAM-related cell adhesion
molecule; Short=Ng-CAM-related; Flags: Precursor
Length = 1304
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 825 NDMGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 234 ISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+I + S AD+G Y+C+ K+
Sbjct: 294 A--EGLPTPIIYWAKED---GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 346 LGAIHHTISVRVKAAP 361
>gi|77681487|ref|NP_001029334.1| neuronal cell adhesion molecule precursor [Pan troglodytes]
gi|56122350|gb|AAV74326.1| neuronal cell adhesion protein [Pan troglodytes]
Length = 1180
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 806 NDMGFAPEPAVV 817
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|332237972|ref|XP_003268178.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Nomascus
leucogenys]
Length = 1304
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 209/493 (42%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPSDE--RFTVDRD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVVT 481
ND+G PE VVT
Sbjct: 825 NDMGFAPEPAVVT 837
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIVHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 234 ISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+I + S AD+G Y+C+ K+
Sbjct: 294 A--EGLPTPIIYWAKED---GMLPKNRTVYKNFE---KTLQIVHVSEADSGNYQCIAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 346 LGAIHHTISVRVKAAP 361
>gi|403257022|ref|XP_003921137.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1192
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 205/492 (41%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM ++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + + N + +D
Sbjct: 528 WIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE-------RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 806 NDVGFAPEPAVV 817
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 109/278 (39%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + +L + ++ Y L I +++ E D YQC
Sbjct: 269 LLLECIAEGLPTPLIYWAKEDGILPT------NRTSYKNFKKTLQITHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 526
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSNRERPPTFLTPEGNASSKEELRGNVLLLECIA--EGLPTPLIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+IT+ S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GILPTNRTSYKNFK---KTLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 282 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG V+V V+ T A + W + G + Y+I NS N I K++
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 886
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 887 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLKIVNP 944
Query: 399 KIGDLSISWEP 409
+ L++ W+P
Sbjct: 945 TLDSLTLEWDP 955
>gi|302191651|ref|NP_001180513.1| neuronal cell adhesion molecule isoform F precursor [Homo sapiens]
Length = 1180
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 806 NDMGFAPEPAVV 817
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|403257018|ref|XP_003921135.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Saimiri
boliviensis boliviensis]
gi|56122260|gb|AAV74281.1| neuronal cell adhesion protein [Saimiri boliviensis]
Length = 1180
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 205/492 (41%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM ++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + + N + +D
Sbjct: 528 WIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE-------RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 806 NDVGFAPEPAVV 817
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 109/278 (39%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + +L + ++ Y L I +++ E D YQC
Sbjct: 269 LLLECIAEGLPTPLIYWAKEDGILPT------NRTSYKNFKKTLQITHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 526
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSNRERPPTFLTPEGNASSKEELRGNVLLLECIA--EGLPTPLIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+IT+ S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GILPTNRTSYKNFK---KTLQITHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 282 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG V+V V+ T A + W + G + Y+I NS N I K++
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 886
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 887 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLKIVNP 944
Query: 399 KIGDLSISWEP 409
+ L++ W+P
Sbjct: 945 TLDSLTLEWDP 955
>gi|397479949|ref|XP_003811262.1| PREDICTED: neuronal cell adhesion molecule [Pan paniscus]
Length = 1304
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 825 NDMGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 234 ISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+I + S AD+G Y+C+ K+
Sbjct: 294 A--EGLPTPIIYWAKED---GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 346 LGAIHHTISVRVKAAP 361
>gi|157819517|ref|NP_001101773.1| protein sidekick-2 [Rattus norvegicus]
gi|149054713|gb|EDM06530.1| sidekick homolog 2 (chicken) (predicted) [Rattus norvegicus]
Length = 2053
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 210/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ L+ L Q D L I L P+ D M QC A N
Sbjct: 234 CRAKGVPPPSITWYKDAALVEVGKLTRFKQR----SDGGLQISGLLPD-DTGMVQCFAHN 288
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 289 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 346
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 347 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 405
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 406 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 459
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + + + + W
Sbjct: 460 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTMERRAINLTWAKP 519
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y I+ + N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 520 FDGNSPLMRY-ILEMSENNAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFR 568
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 569 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 628
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 629 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 683
Query: 478 EVVTIW 483
VT W
Sbjct: 684 SKVTEW 689
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 109/279 (39%), Gaps = 25/279 (8%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++T C A P + W ++G LL++ + D +R N + D
Sbjct: 135 SEVTMECVANARPLIKLHIVWKKDGALLSNG---ISDYNRRLTITNPMV-------SDAG 184
Query: 63 MYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y+C A + + A L VL P F + P E A V I C + P P
Sbjct: 185 YYECEAMLRSSSVAPVTRGAYLSVLE-PPQFVREP-ERHITAEMEKVVDIPCRAKGVPPP 242
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD + +G R K +G L IS + DD+G+ C A N G ++ L V
Sbjct: 243 SITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMVQCFAHNAAGEAQTSTYLAVT 302
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+ P T+ ++ L C T A W G RI + ++ P
Sbjct: 303 SIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--LASGSVQLPRFT 357
Query: 238 -IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 358 LLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 396
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1306 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1364
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1365 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1412
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1413 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1472
Query: 454 SEFYYTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1473 YLTKHRRYEIRMSVYNAVGEGPLS 1496
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 851 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 907
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + + + E D +
Sbjct: 908 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGMIGEGEEWLLI--YQLSNEPDA----RSME 961
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 962 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1020
Query: 407 WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 457
W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 1021 WMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHTVQD---------RVEREYTIEDLEE 1071
Query: 458 YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1072 WTEYRVQVQAFNAIGSGPWSQAV 1094
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1717 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1773
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1774 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1807
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 103/273 (37%), Gaps = 35/273 (12%)
Query: 117 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P+P+ W +DG I R I L+I D+G Y A N D + I
Sbjct: 45 PRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 104
Query: 177 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
L GP+ I +A + + C A+ L+ + +W +G + N
Sbjct: 105 LAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGALLSN 164
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLP 282
I+ L ITN +DAG YEC + S+V ++ + V PP
Sbjct: 165 ---------GISDYNRRLTITNPMVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQF- 214
Query: 283 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
V+ E H T+ + D + + I TW+ + V ++ R+ R
Sbjct: 215 --VREPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVGKLTRFKQR 264
Query: 343 KEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 374
+ ++ + L+P T + A N G + S+
Sbjct: 265 SDGGLQISGLLPDDTGMVQCFAHNAAGEAQTST 297
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1480 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1538
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1539 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1593
Query: 474 GPES 477
GP S
Sbjct: 1594 GPRS 1597
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 78/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W AT I Y+I R N +T + V+ +
Sbjct: 1205 PGPPMGILFPEVRTTSVRLIWQPPATPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1263
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
Y + L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1264 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1315
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1316 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1373
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1374 --TSYKFRVKATNDIG 1387
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 996 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1053
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1054 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1105
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q+ GN +
Sbjct: 1106 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQARFWLVEGNSSRS 1164
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1165 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1193
>gi|6651380|gb|AAF22282.1|AF172277_1 NgCAM-related related cell adhesion molecule [Homo sapiens]
Length = 1308
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 825 NDMGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|302191649|ref|NP_001180512.1| neuronal cell adhesion molecule isoform E precursor [Homo sapiens]
Length = 1192
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 806 NDMGFAPEPAVV 817
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|403257026|ref|XP_003921139.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Saimiri
boliviensis boliviensis]
Length = 1304
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 205/492 (41%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM ++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + + N + +D
Sbjct: 547 WIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE-------RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 109/278 (39%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + +L + ++ Y L I +++ E D YQC
Sbjct: 288 LLLECIAEGLPTPLIYWAKEDGILPT------NRTSYKNFKKTLQITHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 545
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 105 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 285 GNVLLLECIAEGLPTPLIYWAKEDGILPT--NRTSYKNFKKTLQITHVSEADSGNYQCIA 342
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + + V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 453
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 123/311 (39%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-----GNMDLN 229
I + S E TIAA+ + A + ++ GN+ L
Sbjct: 234 ISVKVISVDEL---NDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASSKEELRGNVLLL 290
Query: 230 E-----LETPNI---NIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
E L TP I DG L L+IT+ S AD+G Y+C+ K+ +G I
Sbjct: 291 ECIAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIH 350
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 351 HTISVRVKAAP 361
>gi|403257024|ref|XP_003921138.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Saimiri
boliviensis boliviensis]
Length = 1211
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 205/492 (41%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFINVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM ++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + + N + +D
Sbjct: 547 WIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE-------RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 109/278 (39%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + +L + ++ Y L I +++ E D YQC
Sbjct: 288 LLLECIAEGLPTPLIYWAKEDGILPT------NRTSYKNFKKTLQITHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 545
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 105 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 285 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 342
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + + V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 453
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 123/311 (39%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-----GNMDLN 229
I + S E TIAA+ + A + ++ GN+ L
Sbjct: 234 ISVKVISVDEL---NDTIAANLSDTEFYGAKSNRERPPTFLTPEGNASSKEELRGNVLLL 290
Query: 230 E-----LETPNI---NIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
E L TP I DG L L+IT+ S AD+G Y+C+ K+ +G I
Sbjct: 291 ECIAEGLPTPLIYWAKEDGILPTNRTSYKNFKKTLQITHVSEADSGNYQCIAKNALGAIH 350
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 351 HTISVRVKAAP 361
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 282 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG V+V V+ T A + W + G + Y+I NS N I K++
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 905
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 906 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLKIVNP 963
Query: 399 KIGDLSISWEP 409
+ L++ W+P
Sbjct: 964 TLDSLTLEWDP 974
>gi|338723803|ref|XP_003364800.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Equus
caballus]
Length = 1180
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 206/495 (41%), Gaps = 55/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGKPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 467
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 468 EWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-K 524
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P+ + P + + C + L W + + N +
Sbjct: 525 DPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDG-------RFTV 577
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVV 288
D L +T+ S D G Y CV +T+ +S + V P P P +++
Sbjct: 578 DKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDVPNPPFDLELT 637
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEAS 346
+ S + WT G N PIT + I + W + +E + +
Sbjct: 638 DQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQTT 687
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+
Sbjct: 688 AQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KV
Sbjct: 748 WKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTPTF--VPYLIKV 802
Query: 466 QAINDVGPGPESEVV 480
QA+NDVG PE VV
Sbjct: 803 QALNDVGFAPEPAVV 817
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 40/285 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ L E D YQ
Sbjct: 269 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQILQVSEADSGNYQ 320
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 321 CIAKNALGAIHHTISVTV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGKPKPRISWLS 377
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 378 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 433
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNM--DLNELET 233
PP+I +A N + A+ LLD A+ + G + + D+ L
Sbjct: 434 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLH- 486
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI A G Y CV ++ +G + + ++ P
Sbjct: 487 -----ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C+P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQALVLPCSPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISVKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + +N N L+I S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GTLPINRTFYRNFK---KTLQILQVSEADSGNYQCIAKNALGAIHHTISVTVKAAP 342
>gi|426357543|ref|XP_004046097.1| PREDICTED: neuronal cell adhesion molecule-like [Gorilla gorilla
gorilla]
Length = 1103
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTVEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 806 NDMGFAPEPAVV 817
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L V + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTVEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|47211487|emb|CAF95092.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1278
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 203/501 (40%), Gaps = 66/501 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A GVP T W+R G L + E+ ++ + V E D Y C
Sbjct: 343 LLLECIAAGVPTPTIKWYRKGGDLPERKVKFENFNKTLLVVGV-------SEEDAGEYVC 395
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N + S ++V P + +P E G + C PKP W +
Sbjct: 396 MAINHQGSIRHSILVQV-KAAPYWLDKPTNLVLAPNENGR--LVCRANGNPKPNIQWLIN 452
Query: 127 GNIIGSGGR---RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I S + R + + ++ V S +Y C A+N +G S + VL P
Sbjct: 453 GQPIESSPQNPSRDVLGD-TIIFRSVQMGSSAVYQCNASNQYGYLLSNAFVSVLDMPP-- 509
Query: 184 EQLPPK---ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L PK I + + + L C L D+ W NG G +D N
Sbjct: 510 RMLGPKNQLIKVIENNHTFLDCPFFGSPLPDLR--WFKNGQGSG-VDGGHYSVHN----N 562
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT------- 293
G LEI A D G Y CV S +GK + + V+ L V
Sbjct: 563 GTLEIKRARSEDEGTYTCVASSLLGKAENQVRLEVKEEASLNPSVSSALPPDRPDPPLEL 622
Query: 294 --------SATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRYTGRK 343
S + W G N P+TH+ + W W N+S Y G
Sbjct: 623 DLSDPAVRSVRLTWIPGNDNRSPVTHFLVQFEEDRWEPGRWRNLSS---------YPGHL 673
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ I L P+ Y+F+VIA N +G EPS PSPQY T P P + G G G++
Sbjct: 674 NSVILQ-LAPFVNYQFRVIAINSVGQSEPSLPSPQYKTSGAAPDVIPRGLRGWGSMKGNM 732
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE--- 460
I+WEPL ++N N+YY ++W++K+ +E ++ NV VR + TE
Sbjct: 733 EITWEPLLDLERNGANLYYSVWWKRKDTSE-------DWNNV--TTVRTKHVVHNTETYV 783
Query: 461 -YEVKVQAINDVGPGPESEVV 480
Y++K+QA N+ G GPES ++
Sbjct: 784 PYQIKIQAGNEFGSGPESNII 804
>gi|350588948|ref|XP_003482751.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Sus scrofa]
Length = 1183
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 208/485 (42%), Gaps = 45/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER ++Y
Sbjct: 371 DGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFV 122
QC A N+ ++A + VL P + T + F C +P P
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIE 481
Query: 123 WKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 482 WFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KD 538
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NINI 238
P+ + P + + C + L + W D +EL + +
Sbjct: 539 PTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTV 590
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
D L + + + D G Y CV +T+ +S + V P P +++ + S +
Sbjct: 591 DKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDRSVQLS 650
Query: 299 WTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
WT G N PIT + I + W + +E V G + + + L P+
Sbjct: 651 WTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------TAQLKLSPYVN 700
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+W+PL + N
Sbjct: 701 YAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGFESN 760
Query: 417 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
P + YK+ WR+K+ D E+ S + NV +V F Y VKVQA+NDVG P
Sbjct: 761 GPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNDVGFAP 815
Query: 476 ESEVV 480
E VV
Sbjct: 816 EPAVV 820
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 282 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIIQVTEADSGNYQ 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 334 CIAKNTLGAIHHTISVTV-KAAPYWIIAPQNLVLSPGEDG--TLICRANGNPKPRISWLS 390
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 391 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAE--- 446
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A LD A+ + G + + E
Sbjct: 447 ----PPRILTSA--NTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALR----EDIY 496
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I + G LEI A G Y CV ++ +G + + ++ P
Sbjct: 497 ILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 47/315 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMK---TGSGTLTINIMSDGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRS-GQSLVLPCRPPMGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTA------------- 161
P ++ D + ++ + NG+L S V +D+ Y C A
Sbjct: 168 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQP 227
Query: 162 --TNVHGMDESKGRLIV------LHGPSYYEQLPPKITIA---AHRNLQLRCSAHTEELL 210
V +DE + +G + + PP A R +LR + + E +
Sbjct: 228 ISVKVTSVDELNDTIAANLSDTEFYGAKPHRERPPTFLTPEGNASRKEELRGNVLSLECI 287
Query: 211 D------VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
+ Y W G + +N N L+I + AD+G Y+C+ K+T+
Sbjct: 288 AEGLPTPIIY-WIKED---GTLPINRTFYRNFK---KTLQIIQVTEADSGNYQCIAKNTL 340
Query: 265 GKISTKTTVIVEGPP 279
G I +V V+ P
Sbjct: 341 GAIHHTISVTVKAAP 355
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + +N N I K
Sbjct: 833 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP ++TP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 944 IVNPTLDSLTLEWDP 958
>gi|449275013|gb|EMC84019.1| Neuronal cell adhesion molecule [Columba livia]
Length = 1308
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 214/492 (43%), Gaps = 48/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C A G P SW NG + + ED R D ++ ER A+YQ
Sbjct: 377 DGTLICRANGNPKPNISWLANGVPI---AIAPEDPSRKVDGDTIIFSHVQ--ERSSAVYQ 431
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWK 124
C A N+ ++A + VL P ++ Y + + C +PKP+ W
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRILT--TTNKLYQVIADSPALLDCAYFGSPKPEIEWF 489
Query: 125 K--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
K G+I+ G +NG L I +D +G Y+C A N G +++ L V P+
Sbjct: 490 KGVKGSIL-RGNEYIFHDNGTLEIPVAQKDSTGTYTCVARNELGKIQNEVHLEV-KDPTM 547
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ P I + + C + L IW + N L + E + D
Sbjct: 548 IIKQPEYKVIQRYGQVSFECIIKHDSTLLPTVIWLKD-----NDALPDDERFLVGKDN-- 600
Query: 243 LEITNASFADAGEYECVVKSTVGKISTK----------TTVIVEGPPGLPGGVQVVEVHK 292
L I N + D G Y C+V +T+ +S T I+ P P +++ +
Sbjct: 601 LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNPPFDLELTGQLE 660
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENV 350
S + W G N PIT++ I + W +E V G + +++
Sbjct: 661 RSVELSWIPGDENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGTQ---------TTVQLK 710
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L P+ Y F+VIA NE+G +PS PS QY T + P + PS + G G + +L I+WE L
Sbjct: 711 LSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSEPDNLVITWESL 770
Query: 411 PREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ N P + YK+ WR+K+ D E+ S + NV +V F YE+KVQA+N
Sbjct: 771 KGFQSNGPGLQYKVSWRQKDVDDEWTSVIV---ANVSKYIVSGTPTF--VPYEIKVQALN 825
Query: 470 DVGPGPE-SEVV 480
D+G PE SEV+
Sbjct: 826 DLGYAPEPSEVI 837
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 105 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
GNV + C P P W K+G + + R FEN L I VS DSG Y C A
Sbjct: 285 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCIA 342
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N+ G + V P Y+ P + ++ + L C A+ +++ W NGV
Sbjct: 343 RNMLGSAHHVISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPNIS--WLANGV 399
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I E P+ +DG + ++ + Y+C + G + V V P
Sbjct: 400 PIAIAP----EDPSRKVDGDTIIFSHVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 118/314 (37%), Gaps = 45/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + + Q L I +N +
Sbjct: 58 VDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDK---DAQVTMKPNSGTLVINIMNGGKA 114
Query: 61 PA---MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
A +YQC A+N+ S+ + + P + K LE + EG ++ + C P
Sbjct: 115 EAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKERLEP-NHVREGDSLVLHCRPPVGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTA------------- 161
P ++ D ++ + NG+L S V +D+ Y C A
Sbjct: 174 PPPIIFWMDNAFQRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTIQQKQP 233
Query: 162 --TNVHGMDESKGRLIV------LHGPSYYEQLPPKI---TIAAHRNLQLRCSAHTEELL 210
V MD + ++G + P + T + ++LR + E +
Sbjct: 234 ISVKVFSMDSLNDTIAANLSDTDIYGAKPVTERQPVLLTPTGSTSTKVELRGNVLLLECI 293
Query: 211 DVAY-----IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
W G G + N N L+I + S AD+G Y+C+ ++ +G
Sbjct: 294 AAGLPTPVIRWIKEG---GELPANRTFFENFK---KTLKIIDVSEADSGNYKCIARNMLG 347
Query: 266 KISTKTTVIVEGPP 279
+V V+ P
Sbjct: 348 SAHHVISVTVKAAP 361
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 38/241 (15%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG VQV ++ T A + W G G + ++K+ + + S + K
Sbjct: 849 PGNVQVHVINSTLAKVHWDPVPLKTVRGHLQGYKVYYWKVQSLSRR-------SRRHVEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S+Y+ V N G G P+SP + TP P +PS +
Sbjct: 902 KILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEG-PASPDKVFKTPEGVP-SSPSFLK 959
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ L++ W N I Y + ++ N+T E G + +RIP+
Sbjct: 960 ITNPTLDSLTLEWG--SPTHPNGILISYILKFQPINNTH-------ELG--PLVEIRIPA 1008
Query: 455 E---------FYYTEYEVKVQAINDVGPGPE--SEVVTIWHDPLVIISYVCQGDLKLCLP 503
Y T Y+ A VG G + E VTI + ++ V G ++ P
Sbjct: 1009 NESSMILKNLNYSTRYKFYFNAQTSVGSGSQITEEAVTIMDEAGILRPAVGAGKVQPLYP 1068
Query: 504 R 504
R
Sbjct: 1069 R 1069
>gi|338723807|ref|XP_003364802.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Equus
caballus]
Length = 1192
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 206/495 (41%), Gaps = 55/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGKPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 467
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 468 EWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-K 524
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P+ + P + + C + L W + + N +
Sbjct: 525 DPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDG-------RFTV 577
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVV 288
D L +T+ S D G Y CV +T+ +S + V P P P +++
Sbjct: 578 DKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDVPNPPFDLELT 637
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEAS 346
+ S + WT G N PIT + I + W + +E + +
Sbjct: 638 DQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQTT 687
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+
Sbjct: 688 AQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KV
Sbjct: 748 WKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTPTF--VPYLIKV 802
Query: 466 QAINDVGPGPESEVV 480
QA+NDVG PE VV
Sbjct: 803 QALNDVGFAPEPAVV 817
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 40/285 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ L E D YQ
Sbjct: 269 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQILQVSEADSGNYQ 320
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 321 CIAKNALGAIHHTISVTV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGKPKPRISWLS 377
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 378 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 433
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNM--DLNELET 233
PP+I +A N + A+ LLD A+ + G + + D+ L
Sbjct: 434 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLH- 486
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI A G Y CV ++ +G + + ++ P
Sbjct: 487 -----ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C+P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQALVLPCSPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISVKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + +N N L+I S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GTLPINRTFYRNFK---KTLQILQVSEADSGNYQCIAKNALGAIHHTISVTVKAAP 342
>gi|338723809|ref|XP_001491938.3| PREDICTED: neuronal cell adhesion molecule isoform 1 [Equus
caballus]
Length = 1211
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 206/495 (41%), Gaps = 55/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGKPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPTI 486
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 487 EWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-K 543
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P+ + P + + C + L W + + N +
Sbjct: 544 DPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDG-------RFTV 596
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVV 288
D L +T+ S D G Y CV +T+ +S + V P P P +++
Sbjct: 597 DKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYDVPNPPFDLELT 656
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEAS 346
+ S + WT G N PIT + I + W + +E + +
Sbjct: 657 DQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQTT 706
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+
Sbjct: 707 AQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVIT 766
Query: 407 WEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KV
Sbjct: 767 WKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTPTF--VPYLIKV 821
Query: 466 QAINDVGPGPESEVV 480
QA+NDVG PE VV
Sbjct: 822 QALNDVGFAPEPAVV 836
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 40/285 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ L E D YQ
Sbjct: 288 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQILQVSEADSGNYQ 339
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 340 CIAKNALGAIHHTISVTV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGKPKPRISWLS 396
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 397 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNM--DLNELET 233
PP+I +A N + A+ LLD A+ + G + + D+ L
Sbjct: 453 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALREDIYVLH- 505
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI A G Y CV ++ +G + + ++ P
Sbjct: 506 -----ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 119/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C+P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRN-GQALVLPCSPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 234 ISVKVISVDELNDTIAANLSDTEFYGVKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I S AD+G Y+C+ K+
Sbjct: 294 A--EGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQILQVSEADSGNYQCIAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 346 LGAIHHTISVTVKAAP 361
>gi|426227603|ref|XP_004007907.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Ovis aries]
Length = 1183
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 205/487 (42%), Gaps = 45/487 (9%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D T C A G P SW NG + E P +D R D ++ + ER A+
Sbjct: 369 EEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAV 423
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPK 120
YQC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 424 YQCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPA 479
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD GS R I+ ENG L I +D +G Y+C A N GM ++ L +
Sbjct: 480 IEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI- 536
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NI 236
P+ + P + + C + L W D EL +
Sbjct: 537 KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------DHGELPSDGRF 588
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+D L + + + D G Y CV +T+ +S + V P P +++ + S
Sbjct: 589 TVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDRSVQ 648
Query: 297 IQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ WT G N PIT + I + W + +E V G + + + L P+
Sbjct: 649 LSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGTQT---------TAQLKLSPY 698
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+W+PL +
Sbjct: 699 VNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFE 758
Query: 415 QNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+ND G
Sbjct: 759 SNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDAGF 813
Query: 474 GPESEVV 480
PE V
Sbjct: 814 APEPAAV 820
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 112/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 282 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIVQVTEADSGNYQ 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P E G T+ C PKP+ W
Sbjct: 334 CIAKNSLGAIHHTISVTV-KAAPYWIIAPQNLVLSPEEDG--TLICRANGNPKPRISWLS 390
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 391 NGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 446
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ W + G+ ++
Sbjct: 447 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK--GSALREDIYVL 498
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ N G LEI A G Y CV ++ +G + ++ P
Sbjct: 499 HEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 539
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 168 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITIAAHRN----------LQLRCS 203
+DE + +G + Q PP L L C
Sbjct: 228 ISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECI 287
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + AD+G Y+C+ K++
Sbjct: 288 A--EGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQIVQVTEADSGNYQCIAKNS 339
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 340 LGAIHHTISVTVKAAP 355
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V V V+ T A + W G G I ++K + N I K
Sbjct: 833 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ WEP
Sbjct: 944 IVNPTLDSLTLEWEP 958
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 337
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NSLGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 394
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|443706398|gb|ELU02465.1| hypothetical protein CAPTEDRAFT_220777 [Capitella teleta]
Length = 1327
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 200/427 (46%), Gaps = 25/427 (5%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
+TC+ +P WF NG ++ +P D R + + + I Y + D + QC +
Sbjct: 349 FTCQTEAIPAPVSFWFLNGIPISK--VP-ADPRRVTVGNKL--IFYNMTKEDAQVIQCNS 403
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N+ + +A L VL+ P+ PL ++ A EG + + C +PKP+ VWKK G+
Sbjct: 404 TNKHGYAWENAYLNVLSEPPTITDPPLLNQK-AAEGQTINLTCTVFGSPKPQVVWKK-GS 461
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+GGR K+ E+G+L I+ VS D+G Y+C ATN + G L+V + + P
Sbjct: 462 EQLTGGRYKVLEDGHLQITDVSLVDAGTYTCNATNKFDTASATGSLVVRRK-TQIQTEPL 520
Query: 189 KITIAAHRNLQLRCSAHT--EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ I + C+A T EE+ +++ W +G I + N++ L I+
Sbjct: 521 DVMIYEGTEAKFTCTATTDPEEVNNLSIEWKKDGQLIDYALAQRVFRNNMD---NSLTIS 577
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGATN 305
D G+Y C+ + + + ++V+ P P V V ++ A + W G N
Sbjct: 578 GTISLDTGKYTCMAVNGLDSDESSAQLVVQAVPDPPNNVWVRCYNEDRRAEVNWQPGKEN 637
Query: 306 GRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI ++ I T++N TW++++ +V E + L PW Y F+++A
Sbjct: 638 YAPILNFIIQFNTSFNPDTWYDIATNVSQNERMKIVS---------LSPWGNYTFRILAR 688
Query: 365 NELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ + + P + P + G G +L I W P+P +QN P+ Y
Sbjct: 689 NKIGQSPPSAHTVEVCQVQPGTPDKNPENVIGEGDLPDNLVIFWTPMPSIEQNGPDFKYI 748
Query: 424 IFWRKKN 430
+ W++ +
Sbjct: 749 VTWQRAD 755
>gi|403287224|ref|XP_003934852.1| PREDICTED: protein sidekick-1 [Saimiri boliviensis boliviensis]
Length = 2227
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 203/480 (42%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W++N ++ L++ + L I+ L+PE D ++QC A N
Sbjct: 422 CRAMGVPLPTLQWYKNAISISK----LQNPRYKVLASGGLRIQKLHPE-DSGIFQCFASN 476
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP ++T +G + C APKP WK++ I+
Sbjct: 477 EGGEIQTHTYLDVTNIAPVFTQRP--ADTTVTDGMTAILRCEVSGAPKPAITWKRENRIL 534
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 535 ASGSVQIPRFMLLESGGLQITPVFIQDAGNYTCYAANTEGSLNASAMLTVWNRTSIIHP- 593
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLLE 244
P + LRC A + + + Y+W + N+ L L T I + DG LL
Sbjct: 594 PEDHVVIKGTTATLRCGAMHDPRVSLRYVWKKD-----NVVLTPLSTSRIVVEKDGSLL- 647
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G+Y C + S G S + V P P + H + + W
Sbjct: 648 ISQTWSGDIGDYTCDIVSEGGNDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSWVRP 707
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
PI +Y I+ + NS W V +G E+ T + L P TY+F+V
Sbjct: 708 FDGNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVC 758
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G G+ S+ + + P + P P I G + + W+P P + N Y
Sbjct: 759 AVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGY 818
Query: 423 KIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+ +R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 819 ILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 875
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1913 AEGSPGSPRDVLVTK-SASELTLQWTEGYAGDTPTTGYVIEARPSDEGLW-----DMFVK 1966
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A NE GYGEPSSPS + + P+
Sbjct: 1967 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSSPSMAVSAQVEAPF 2018
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 102/268 (38%), Gaps = 43/268 (16%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+ +SE + +Y I +++ L D Y+C
Sbjct: 136 LVLTCLAEGSWPLEFKWMRD----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 183
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S + + +R S+ +A + I + P+P+ W
Sbjct: 184 VVRNRMGALLQRKSEVHVAYMGSFMDTDQRKTVSQGHAAILNLLPI----TSYPRPQVTW 239
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----- 178
++G+ I R I L+I + D+G Y A N + I L
Sbjct: 240 FREGHKIIPSNRIAITLENQLVILATTPSDTGAYYVQAVNEKNGENKTSPFIHLSIARDI 299
Query: 179 GPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
G S E + P I +A L C A + +++ W NGVRI
Sbjct: 300 GTS--ETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEELSVTWKRNGVRI------- 350
Query: 231 LETPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 351 --TSGLHSFGRRLTISNPTSADTGLYVC 376
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S V+R
Sbjct: 1499 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTFSSSISHEATACVVER-- 1556
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1557 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1606
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 444
+ I W+P E N Y+I++R+ + + +++TLK +
Sbjct: 1607 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKT 1666
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1667 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1709
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 314
V + + T +T+ PP LPG + + + SAT+Q+ G I+ + +
Sbjct: 1060 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1119
Query: 315 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 367
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1120 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1168
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 424
G S S T P AP+ + L + W PLP + N ++ Y+I
Sbjct: 1169 GPSPYSQSSRVIQTLQAPPDVAPASVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1228
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 478
+WR ++ QS L + + R+ EF + EYE+++QA N VG GP SE
Sbjct: 1229 YWR----SDVQSSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1279
Query: 479 VV 480
VV
Sbjct: 1280 VV 1281
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1687 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1745
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP
Sbjct: 1746 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1803
Query: 477 SE 478
S+
Sbjct: 1804 SD 1805
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 18/238 (7%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1364 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1423
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1424 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1475
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1476 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1534
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
E+Q+ + VV F T Y+++++A ND+G E+E VT D
Sbjct: 1535 RGEWQTFSSSISHEATACVVERLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQD 1590
>gi|126336357|ref|XP_001373792.1| PREDICTED: neural cell adhesion molecule L1-like protein
[Monodelphis domestica]
Length = 1224
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 209/481 (43%), Gaps = 37/481 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P W NG ++ LP +F + + LN +YQC A N
Sbjct: 367 CEAEGEPAPEIEWKINGLPIDKHPLP---GIVFFPGEISFSNVQLN---HTGVYQCEATN 420
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
++A + VL + P + P + A G + + C A+P W++ +
Sbjct: 421 VHGKILATANINVLDIAP-LMQTPDDEGYAAVVGYSAFLLCEVFASPPAVITWQRPSKVE 479
Query: 131 G-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY-YEQLPP 188
G + NG L I +++D+G Y+C + G L + + L P
Sbjct: 480 RLEGSHYTTYPNGTLEIKETTKEDAGPYTCWVKSPRGEVAVTAHLTIRDATNLTVSPLNP 539
Query: 189 KITIAAHR---NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ I +H + + C +H + L ++ W+ +G +++N E I IDG L I
Sbjct: 540 HV-IRSHLLVLHCDIECDSHLKHSLKLS--WSKDG---EALEINGTEDVRIIIDGDKLTI 593
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
+N + D G Y C+ + + + T V + P P V + E S + W G +
Sbjct: 594 SNITLEDEGLYACLANTALDRAMATTQVTILDVPDPPENVYLSERQNRSVRLSWEAGDNH 653
Query: 306 GRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
IT + I N + W E+ + G + ++ + L P+ Y+F+V
Sbjct: 654 NSAITEFIIEFEGNRDEPGKW---------AELTKVQGNETTALLS-LAPYVRYQFRVRG 703
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N +G PSSPS + TP P + P I + ++ I WEPL +QN P + Y+
Sbjct: 704 VNAVGRSIPSSPSDYHETPPAAPDKNPENIRVEASQPKEMFIKWEPLNSMEQNGPGLEYR 763
Query: 424 IFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ WR++ +E+ E + +R+ + +T Y+VKVQAIN +G GPE + +T+
Sbjct: 764 VTWRQQGVPSEWSDELATD------NTLRVMTSSVFTPYDVKVQAINQLGSGPEPQTITV 817
Query: 483 W 483
+
Sbjct: 818 Y 818
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 113/315 (35%), Gaps = 61/315 (19%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP---ERDPAM 63
+ CEA G P+ T+ W +N E L R +N T + LN
Sbjct: 51 FQFVCEAKGNPEPTFHWTKN-----EEQFSLLSDPRIISSNNTGTFKILNEGHITHFQGK 105
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S ++ P F K PLE E EG ++ + CNP P
Sbjct: 106 YRCFASNELGTAMSDEIEFIVPNVPKFPKEKIEPLEVE----EGNSIVLHCNPPKGIPPL 161
Query: 121 FVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA---------------- 161
++ D I R + + G+L + V +DS Y C A
Sbjct: 162 HIYWMNIDLQHIPQDERVYMSQKGDLYFANVEENDSRNDYCCFAAFPRLRTIVQKMPMKL 221
Query: 162 ----------TNVHGMDESKGRLIVLHGPSYYEQLPPK-------ITIAAHRNLQLRCSA 204
++ H + +K +I P LPP+ ITI L L C A
Sbjct: 222 TVNSLKHANDSSSHRQNVTKANVIKQREPRML--LPPETSGSHSSITIIKGGTLLLECFA 279
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
E L W G DL + N G L+I + D G Y C+ K+
Sbjct: 280 --EGLPTPQITWKKVG-----EDLPKGRETQENF-GKTLKIEQVTHMDKGHYHCMAKNYK 331
Query: 265 GKISTKTTVIVEGPP 279
G + V VE PP
Sbjct: 332 GTAIHEFRVTVEEPP 346
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 186/500 (37%), Gaps = 63/500 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P +W R S+ LE + L I+ E D Y C K+
Sbjct: 460 CEVFASPPAVITWQRP-----SKVERLEGSHYTTYPNGTLEIKETTKE-DAGPYTCWVKS 513
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+A L + LT+ P + S + I C+ K W K
Sbjct: 514 PRGEVAVTAHLTIRDATNLTVSP-LNPHVIRSHLLVL---HCDIECDSHLKHSLKLSWSK 569
Query: 126 DGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG + G+ R I + L IS ++ +D G+Y+C A + ++ +L P
Sbjct: 570 DGEALEINGTEDVRIIIDGDKLTISNITLEDEGLYACLANTALDRAMATTQVTILDVPD- 628
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA---YIWTHNGVRIGNMDLNELETPNINID 239
P + ++ +N +R S + + A +I G R EL N
Sbjct: 629 ---PPENVYLSERQNRSVRLSWEAGDNHNSAITEFIIEFEGNRDEPGKWAELTKVQGNET 685
Query: 240 GGLLEITNASFADAGEYECVVK--STVGK-ISTKTTVIVEGPPGLPG----GVQVVEVHK 292
LL S A Y+ V+ + VG+ I + + E PP P ++V
Sbjct: 686 TALL-----SLAPYVRYQFRVRGVNAVGRSIPSSPSDYHETPPAAPDKNPENIRVEASQP 740
Query: 293 TSATIQW--TDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
I+W + P Y++ R S W S+ + R +
Sbjct: 741 KEMFIKWEPLNSMEQNGPGLEYRVTWRQQGVPSEW---SDELATDNTLR------VMTSS 791
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGGGGGKIGDLSIS 406
V P Y+ KV A N+LG G P PQ T D P AP + ++++
Sbjct: 792 VFTP---YDVKVQAINQLGSG----PEPQTITVYSGEDYPDAAPLSVTTRVINSTLINVT 844
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYE 462
W+ +P+E+ + Y+I W K + + KE + + R +PS ++E++
Sbjct: 845 WDRIPKERVHGHLKGYQINWWKTKSRLDERKFPKEIQTIRLPGDRSYGMVPSLDPFSEFK 904
Query: 463 VKVQAINDVGPGPESEVVTI 482
+ V A N G GPES ++
Sbjct: 905 LTVLAYNSKGAGPESSPISF 924
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 8/165 (4%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+GG + + C E P P+ WKK G + G + L I V+ D G Y C A
Sbjct: 269 KGGTLLLECFAEGLPTPQITWKKVGEDLPKGRETQENFGKTLKIEQVTHMDKGHYHCMAK 328
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + R+ V P + ++ P + N L C A E ++ W NG+
Sbjct: 329 NYKGTAIHEFRVTVEEPPRWTKK-PESAVYSIGSNGILLCEAEGEPAPEIE--WKINGLP 385
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
I L P I G + +N G Y+C + GKI
Sbjct: 386 IDKHPL-----PGIVFFPGEISFSNVQLNHTGVYQCEATNVHGKI 425
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 185/493 (37%), Gaps = 59/493 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C++ + SW ++GE L E ED R I + LTI + E D +Y C A
Sbjct: 555 CDSHLKHSLKLSWSKDGEAL--EINGTEDV-RIIIDGDKLTISNITLE-DEGLYACLANT 610
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK-----PKFVWKK 125
L ++ Q+ +L + P E+ Y E N ++ + EA +F+ +
Sbjct: 611 ALDRAMATTQVTILDVP-----DPPEN-VYLSERQNRSVRLSWEAGDNHNSAITEFIIEF 664
Query: 126 DGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+GN G ++ + GN + +S Y V+ + S + PS Y
Sbjct: 665 EGNRDEPGKWAELTKVQGNETTALLSLAPYVRYQFRVRGVNAVGRS-----IPSSPSDYH 719
Query: 185 QLPPKITIAAHRNLQLRCSAHTEEL---------------LDVAYIWTHNGVRIGNMDLN 229
+ PP N+++ S E L+ W GV D
Sbjct: 720 ETPPAAPDKNPENIRVEASQPKEMFIKWEPLNSMEQNGPGLEYRVTWRQQGVPSEWSD-- 777
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----EGPPGLPGGV 285
EL T N L + +S + + + +G T+ V + P P V
Sbjct: 778 ELATDNT------LRVMTSSVFTPYDVKVQAINQLGSGPEPQTITVYSGEDYPDAAPLSV 831
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD--RYTGRK 343
++ T + W D R H K + NW T + E KE+ R G +
Sbjct: 832 TTRVINSTLINVTW-DRIPKERVHGHLKGY-QINWWKTKSRLDERKFPKEIQTIRLPGDR 889
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ L P+S ++ V+A N G G SSP + TP P Q P+ + +
Sbjct: 890 SYGMVPSLDPFSEFKLTVLAYNSKGAGPESSPI-SFQTPEGVPEQ-PNFLKVIHVDKNTV 947
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG--NVGIAVVRIPSEFYYTEY 461
+SW LP+ K + Y + ++ NDT+ E LKE N R+P T+Y
Sbjct: 948 VLSWG-LPK-KAHGNLTGYSLQYQIINDTDEIGE-LKEINITNPSKLSWRVPDLNSTTKY 1004
Query: 462 EVKVQAINDVGPG 474
+ ++A G G
Sbjct: 1005 KFYLRACTSKGCG 1017
>gi|297681287|ref|XP_002818389.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Pongo abelii]
Length = 1211
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNDYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCVA 342
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEP 453
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 234 ISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+I + S AD+G Y+CV K+
Sbjct: 294 A--EGLPTPIIYWAKED---GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCVAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 346 LGAIHHTISVRVKAAP 361
>gi|297681293|ref|XP_002818392.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Pongo abelii]
Length = 1180
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNDYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 806 NDVGFAPEPAVV 817
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 VAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+CV K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|432869236|ref|XP_004071687.1| PREDICTED: protein sidekick-2-like [Oryzias latipes]
Length = 2301
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 207/487 (42%), Gaps = 45/487 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+A G P W+++ ++ +P RY + L I L P+ D M+QC A+
Sbjct: 437 CQARGTPQPEIVWYKDAVPISPVKIP-----RYRVLVGGSLQINGLLPD-DTGMFQCFAR 490
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L V ++ P+ P S++ +G +V + C AP+P W+K +
Sbjct: 491 NLAGEIQTNTYLAVTSIAPNITAGP--SDSAVIDGMSVILHCETAGAPRPAITWQKGERV 548
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LLISP D+G Y+C A+N G+DE+ L+V + +
Sbjct: 549 LASGSVQQPRFTLLESGSLLISPSHLSDAGTYTCMASNSRGIDEASADLVVW-ARTRITK 607
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + V ++W +G I D+N +P + +D G L
Sbjct: 608 PPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWEKSGSVI---DVNT--SPRLRLDPDGTLH 662
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P V + K + + W
Sbjct: 663 ISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPIAVLSTIEKRAINLTWAQA 722
Query: 303 ATNGRPITHYKIIARTN---WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
P+ HY + N W N+ G V + L+P +Y+F
Sbjct: 723 FDGNSPLIHYILEVSENNAPWTVLLANIEPESTGVTV------------SGLIPARSYQF 770
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
++ A N++G G+ S + + P + P P + G + I W+P P QN P
Sbjct: 771 RLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPL 830
Query: 420 IYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y I + D + ++ T + N+ + + I +T YE++V A N G G
Sbjct: 831 QGYIIRYCLSGLPVDCQIKNITNPDQTNLLLEDLII-----WTNYEIEVGAYNGAGRGTY 885
Query: 477 SEVVTIW 483
S VT W
Sbjct: 886 SHKVTEW 892
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 38/234 (16%)
Query: 265 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
G++S T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 1084 GQLSAST--ISSGVPPELPGPPTNLGISNIGPRSITLQFKPGYDGKTSISRWLVEAQIGI 1141
Query: 321 ---NSTWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPS 376
N W V H + E D S+E + L P++ Y F++ N +G PS PS
Sbjct: 1142 IGENEEWLVV--HQLVNEPD------ARSLEVLDLNPYTFYRFRMRQVNIVGSSLPSQPS 1193
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEF 434
+ T P +P+ + L + W PLP + N ++ Y+I + K
Sbjct: 1194 RKIQTLQAPPDISPANVTLRTASETSLWLRWVPLPEWEYNGNPDHVGYRIQYCKAGSK-- 1251
Query: 435 QSETLKEYGNVGIAVV--RIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
G V V+ R+ EF +TEYEV+VQA+N +G GP S+ V
Sbjct: 1252 --------GGVLFHVIMDRLEREFTIEDLEEWTEYEVRVQAVNGIGSGPWSQAV 1297
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 98/269 (36%), Gaps = 45/269 (16%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD---PAM 63
L TC A G + + W NG L +L RYL P D
Sbjct: 151 LVLTCMAEGSWPLEFKWIYNGTELTRFSL---------------EYRYLIPSLDKLHAGH 195
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPK 120
Y+C +N++ S +++V + F + GEG + P + PKP+
Sbjct: 196 YRCIVRNRVGAIMQCSTEVQVAYMN-GFVEGERSQTVSQGEGA---LIHTPRIHSFPKPQ 251
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-- 178
W +DG I S R I + L+I D+G Y A N + + I L
Sbjct: 252 ITWFRDGRKIPSSSRIAITLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPITLTVE 311
Query: 179 ---GPS-----YYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
GP+ P ++ RN + C A+ L+ ++ W +GV +
Sbjct: 312 NVGGPADPIAPSIIIPPKNTSVTVGRNEAIMECVANARPLVKMSITWRKDGVAVST---- 367
Query: 230 ELETPNINIDGGLLEITNASFADAGEYEC 258
I G L I+ + D+G YEC
Sbjct: 368 -----GIRDFGRRLVISLPAVRDSGYYEC 391
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 83/212 (39%), Gaps = 35/212 (16%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
EV + W G+ PI +Y + + NW +VS VDR
Sbjct: 1519 EVQARQVLLSWEPGSDGLSPIRYYTVQYKELPDGNWTVHSASVSHESHSYMVDR------ 1572
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
L P+++Y+F+V A N++G E S S T D P +AP+ + +
Sbjct: 1573 ------LKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDKAPTVLSVTPHTTTSVL 1626
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA--------VVRIPSEF 456
+ W+ E N + +++ +R+ + +S +++ + +R SE
Sbjct: 1627 MRWQLPSEEHINGVLLGFRVRYRELHYDRLRSFSVRTVNSPAANWADLSAPYSIRNLSES 1686
Query: 457 YYTE-----------YEVKVQAINDVGPGPES 477
T+ YE+++ N VG GP S
Sbjct: 1687 TLTQYELDNLSKHKRYEIRLSVYNAVGEGPSS 1718
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 14/223 (6%)
Query: 259 VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPITHYKI 314
+V S++ ++ ++ PP + P V + +TS ++W + NG P H
Sbjct: 1183 IVGSSLPSQPSRKIQTLQAPPDISPANVTLRTASETSLWLRWVPLPEWEYNGNP-DHVGY 1241
Query: 315 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 374
+ + V HVI ++R E +IE+ L W+ YE +V A N +G G P S
Sbjct: 1242 RIQYCKAGSKGGVLFHVIMDRLER-----EFTIED-LEEWTEYEVRVQAVNGIGSG-PWS 1294
Query: 375 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 434
+ T P P+ + + + W +P +N + YK+ +++K+
Sbjct: 1295 QAVHGRTRESVPSSGPTNVSAFATTSSSILVRWGEVPAADRNGLILGYKVVYKEKDSDSA 1354
Query: 435 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
S E GN + V++ S Y YE++V A +G G S
Sbjct: 1355 PSFWAVE-GNTSHS-VQLTSLGKYILYEIQVLAFTRIGDGKTS 1395
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G S+P + A P P + L ++W+P P + QN
Sbjct: 1702 YEIRLSVYNAVGEGPSSAPQEVFVGEA-VPTAPPQNVVVQSSTATQLDVTWDPPPLDAQN 1760
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW + +N+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1761 GDIQGYKIYFWEFQLQNETERLRTLFLPELG------VKLKNLTGYTTYMISVAAFNAAG 1814
Query: 473 PGPES 477
GP S
Sbjct: 1815 DGPRS 1819
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + + T+ WT G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1940 ISRYGAALTLHWTSGDQGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTLNLDMLR 1998
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPS 373
E V TY+F+VIA N+ GYG PS
Sbjct: 1999 EGV-----TYDFRVIAVNDYGYGSPS 2019
>gi|297681289|ref|XP_002818390.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Pongo abelii]
Length = 1192
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNDYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 806 NDVGFAPEPAVV 817
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 VAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+CV K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCVAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|345305290|ref|XP_001513017.2| PREDICTED: protein sidekick-1 [Ornithorhynchus anatinus]
Length = 2113
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 206/488 (42%), Gaps = 33/488 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D DL C+A GVP W+++ ++ L++ + L I+ L+P+ D
Sbjct: 330 VDKTVDLL--CQAMGVPVPNLEWYKDSVPISK----LQNPRYKLLMSGSLQIQKLHPD-D 382
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
++QC A+N+ + L + P+F +RP ++T +G + C APKP
Sbjct: 383 SGIFQCFARNEAGEIQTHTYLEATNIAPTFSQRP--ADTTVTDGMTAVLTCEVSGAPKPA 440
Query: 121 FVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
WK+ I+ SG R + E+G L I+PV D+G Y+C A N G + L V
Sbjct: 441 ITWKRGDQILASGSVQIPRFILLESGGLQIAPVFLHDAGNYTCYAINAEGSLNANAMLTV 500
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ S P I + L C A + + + Y W +G+ I + + L I
Sbjct: 501 WNRTSIVHP-PEDIVVIKGTTATLLCGATHDPRISIRYFWKKDGIIIKSAASSRLM---I 556
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTS 294
+ DG LL I+ D G+Y C + S G S + V P P + H +
Sbjct: 557 SKDGSLL-ISQTWSGDIGDYTCEIVSVGGNDSKMARLEVIELPHSPQNLMASLNSSHSRT 615
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ W P+ +Y I+ + NS W V +D T +I + L P
Sbjct: 616 VILSWVRPFDGNSPLLYY-IVELSENNSPW-----KVHLSNIDPKT--MSVTISD-LTPA 666
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
TY+F+V A N++G G+ S + + P + P P I G + + W+P P +
Sbjct: 667 RTYQFRVCAVNQVGKGQYSMETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETE 726
Query: 415 QNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
N Y + +R E+Q + + I + +T+YE++V A N G
Sbjct: 727 HNGILHGYNLRYRLAGLPGEYQHRNIT---SPEINYCLVKDLIIWTQYEIQVAAYNGAGL 783
Query: 474 GPESEVVT 481
G S VT
Sbjct: 784 GVFSRAVT 791
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 186/517 (35%), Gaps = 95/517 (18%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I R+ D YQC
Sbjct: 52 LVLTCLAEGSWPLEFKWLHN----DSEITSYSSEYKYIIPS---LQRF-----DNGFYQC 99
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + + +R S A + I + PKP+ W
Sbjct: 100 VVRNRMGALLQRKSEVQVAYMGDFMAADQRKTVSPGMAAVLNLLQII----SYPKPQVTW 155
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+DG+ I R I L+I + D+G Y A N + I L +
Sbjct: 156 FRDGHKIIPSHRVAITLENQLVILATTTSDAGGYYVQAVNEKNGENKTSPFIYLSVANEN 215
Query: 184 EQ---------LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+PP T +A + L C A+ + +++ W NGV+I
Sbjct: 216 NASRPVAPVIVIPPCNTSVVAGSSEITLECIANARPVEELSVTWKRNGVKI--------- 266
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL---PGGVQ 286
T I+ G L I+N + +D G Y C K S K + + PP P
Sbjct: 267 TSGIHSFGRRLTISNPTSSDIGMYICEAKLKDSAFETARAKAYLSIIEPPYFTAEPMSRI 326
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ EV KT + G P+ N W+ S + + RY S
Sbjct: 327 LTEVDKTVDLL----CQAMGVPVP----------NLEWYKDSVPISKLQNPRYKLLMSGS 372
Query: 347 IE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNT-PADKPYQAPSRIGGGGG 398
++ L P + F+ A NE G Y E ++ +P ++ PAD + + G
Sbjct: 373 LQIQKLHPDDSGIFQCFARNEAGEIQTHTYLEATNIAPTFSQRPAD------TTVTDGMT 426
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN------DTEFQSETLKEYGNVGIAVVRI 452
+ +S P P I W++ + + L E G + IA V +
Sbjct: 427 AVLTCEVSGAPKP-----------AITWKRGDQILASGSVQIPRFILLESGGLQIAPVFL 475
Query: 453 PSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPLVI 489
YT Y AIN G + ++T+W+ ++
Sbjct: 476 HDAGNYTCY-----AINAEGSLNANAMLTVWNRTSIV 507
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 274 IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
+ GP G PG Q + V K+++ +QWT+G + P T + I A+ + W
Sbjct: 1790 VTAGPAEGSPGSPQDIFVSKSASDLILQWTEGNSGDTPTTGFIIEAKPSDEGLW-----D 1844
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ K++ R +++ L +YEF+V+A NE GYGEPSSPS + + P+
Sbjct: 1845 MFVKDIPRSATSYTVALDK-LKQGVSYEFRVVAVNEFGYGEPSSPSAAVSAQLETPF 1900
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G +
Sbjct: 1308 PGPPVRLVFPEVKLTSVRIVWQPPEEPNGIILGYQIAYRLAASSPNTFTTVE--VGSTIR 1365
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++ L P S Y F+ A G+GEP + ++P PS +
Sbjct: 1366 QFMATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPSELLIPQ 1417
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
K+ S+ + +P ++P Y+ + R+ D E+Q+ + + V+ + F
Sbjct: 1418 SKVSSRSLQLQWIPGSDGSSPIRYFTVQVRELPDGEWQTYSSSISHEATVCVIERLNPF- 1476
Query: 458 YTEYEVKVQAINDVGPGP---ESEVVTIWHD 485
T Y+++++A ND+G E+E VT D
Sbjct: 1477 -TSYKLRLKATNDIGDSDFSVETEAVTTLQD 1506
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+V S +QW G+ PI ++ + R + W S + EA++
Sbjct: 1419 KVSSRSLQLQWIPGSDGSSPIRYFTVQVRELPDGEWQTYSSSI----------SHEATVC 1468
Query: 349 NV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+++Y+ ++ A N++G + S + T D P + PS I + I
Sbjct: 1469 VIERLNPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPSSISVTPHTTSSVLIQ 1528
Query: 407 WEPLPREKQ-NAPNIYYKIFWRK 428
W+P PR+K N + Y+I++R+
Sbjct: 1529 WKP-PRDKSLNGLLVGYRIYYRE 1550
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 24/247 (9%)
Query: 239 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 293
D +LEI N + + + VG S++ ++ PP + PG + V +T
Sbjct: 1059 DAQMLEIPNLTPYTHYRFRMRQVNVVGPSPFSQSSRVIQTLQAPPDIAPGSITVRTASET 1118
Query: 294 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
S ++W D NG P + Y++ RT+ +S+ V VI ++R E +IE
Sbjct: 1119 SLWLRWVPLPDSQYNGNPESVGYRVKYWRTDLHSS---VLVQVINNRLER-----ECTIE 1170
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ + YE ++ A N +G G P S + + T P AP + + ++W
Sbjct: 1171 ELEEW-TEYELQIQAFNAIGAG-PWSEALRGRTRESVPSAAPENVSVEAVSSTQILLTWA 1228
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+P + QN + YKI ++ K+ D+E Q+ ++ GN +V+ + Y YE++V A
Sbjct: 1229 AVPEQDQNGLILGYKILYKAKDLDSEPQTYVVR--GNHTQSVL-LAGLRKYVLYEIQVLA 1285
Query: 468 INDVGPG 474
+G G
Sbjct: 1286 FTRIGNG 1292
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 445
P AP + L I+W+P P E QN YKI++++++++ +E +K +
Sbjct: 1597 PAMAPLNVQVNTLTASQLEITWDPPPLESQNGNIQGYKIYYQEEDNSN-TTEKIKVLF-L 1654
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+++ + +T+Y V + A N G GP+S
Sbjct: 1655 PETTIKLKNLTSHTKYLVSISAFNAAGDGPKS 1686
>gi|390466863|ref|XP_002751796.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Callithrix
jacchus]
Length = 1211
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 206/492 (41%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVITNRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM ++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKD-----NEELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVTAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + +L + ++ Y L I +++ E D YQC
Sbjct: 288 LLLECIAEGLPTPLIYWAKEDGILPT------NRTSYKNFKKTLQITHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + +R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 545
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 105 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 285 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 342
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 282 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG VQV V+ T A + W + G + Y+I NS N I K++
Sbjct: 849 PGNVQVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 905
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 906 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLKIVNP 963
Query: 399 KIGDLSISWEP 409
+ L++ W+P
Sbjct: 964 TLDSLTLEWDP 974
>gi|296488522|tpg|DAA30635.1| TPA: neuronal cell adhesion molecule isoform 2 [Bos taurus]
Length = 1183
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 204/486 (41%), Gaps = 43/486 (8%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D T C A G P SW NG + E P +D R D ++ + ER A+
Sbjct: 369 EEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAV 423
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPK 120
YQC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 424 YQCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPT 479
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W K GS R I+ ENG L I +D +G Y+C A N GM ++ L +
Sbjct: 480 IEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI- 536
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P+ + P + + C + L +W + + N
Sbjct: 537 KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPN-------DGRFT 589
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
+D L + + + D G Y CV +T+ +S + V P P +++ + S +
Sbjct: 590 VDKDRLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDRSVQL 649
Query: 298 QWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
WT G N PIT + I + W + +E V G + + + L P+
Sbjct: 650 SWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE-VPGTQT---------TAQLKLSPYV 699
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+W+PL +
Sbjct: 700 NYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFES 759
Query: 416 NAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+ND G
Sbjct: 760 NGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDAGFA 814
Query: 475 PESEVV 480
PE V
Sbjct: 815 PEPAAV 820
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 282 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIVQVTEADSGNYQ 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P E G T+ C PKP+ W
Sbjct: 334 CIAKNALGAIHHTISVTV-KAAPYWIIAPQNLVLSPEEDG--TLICRANGNPKPRISWLS 390
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 391 NGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 446
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 447 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALR----EDIY 496
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ + G LEI A G Y CV ++ +G + ++ P
Sbjct: 497 VLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 539
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 115/316 (36%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 52 IDPRENIVIQCEAKGKPSPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-IILRNGQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 168 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITIAAHRN----------LQLRCS 203
+DE + +G + Q PP L L C
Sbjct: 228 ISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECI 287
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + AD+G Y+C+ K+
Sbjct: 288 A--EGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQIVQVTEADSGNYQCIAKNA 339
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 340 LGAIHHTISVTVKAAP 355
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + N I K
Sbjct: 833 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 885
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 886 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 943
Query: 395 GGGGKIGDLSISWEP 409
+ L++ WEP
Sbjct: 944 IVNPTLDSLTLEWEP 958
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 337
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NALGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 394
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|168278575|dbj|BAG11167.1| neuronal cell adhesion molecule precursor [synthetic construct]
Length = 1180
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 209/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E +G + + N
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE---------VSGTQTTAQLN 691
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 692 -LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 806 NDMGFAPEPAVV 817
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLG 513
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|40788219|dbj|BAA20801.2| KIAA0343 [Homo sapiens]
Length = 1187
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 209/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 365 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 418
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 419 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 477
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 478 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 534
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 535 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 587
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 588 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 647
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E +G + + N
Sbjct: 648 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE---------VSGTQTTAQLN 698
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 699 -LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 757
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 758 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 812
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 813 NDMGFAPEPAVV 824
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 276 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 328
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 329 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 385
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 386 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 444
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 445 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 495
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 496 GTLEIPVAQKDSTGTYTCVARNKLG 520
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 65 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 121
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 122 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 180
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 181 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 240
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 241 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 296
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 297 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 349
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 837 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 889
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 890 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 947
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 948 IVNPTLDSLTLEWDP 962
>gi|449481128|ref|XP_002195594.2| PREDICTED: neuronal cell adhesion molecule [Taeniopygia guttata]
Length = 1284
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 213/491 (43%), Gaps = 46/491 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C A G P + SW NG + + ED R D ++ + ER A+YQ
Sbjct: 353 DGTLICRANGNPKPSISWLANGVPI---AIAPEDPSRKVDGDTIIFSQVQ--ERSSAVYQ 407
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL P P + C +PKP+ W K
Sbjct: 408 CNASNEYGYLLANAFVNVLAEPPRILT-PANKLYQVIADSPALLDCAYFGSPKPEIEWFK 466
Query: 126 --DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G+I+ G +NG L I ++ +G Y+C A N G +++ +L + P+
Sbjct: 467 GVKGSIL-RGNEYVFHDNGTLEIPVAQKNSAGTYTCVARNELGKIQNEVQLEI-KDPTMI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ P I + + C + L W N N +L + E + D L
Sbjct: 525 IKQPEYKVIQRYGQVSFECIIKHDSTLLPTVTWLKN-----NDELPDDERFLVGKDN--L 577
Query: 244 EITNASFADAGEYECVVKSTVGKISTK----------TTVIVEGPPGLPGGVQVVEVHKT 293
I N + D G Y C+V +T+ +S T I+ P P +++ +
Sbjct: 578 TIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNPPFDLELTGQLER 637
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
S + W G N PI ++ I + W +E V G + + + L
Sbjct: 638 SIDLSWIPGDENNSPIINFVIEYEDALHEPGVWHYQTE-VPGTQ---------TTAQLKL 687
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+VIA N++G +PS PS QY T + P + P+ + G G + +L I+WEPL
Sbjct: 688 SPYVNYSFRVIAVNKIGRSQPSEPSEQYLTKSASPDENPANVQGIGSEPDNLVITWEPLK 747
Query: 412 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ N P + YK+ WR+K+ D E+ S + NV +V F YEVKVQA+ND
Sbjct: 748 GFQSNGPGLQYKVSWRQKDVDDEWTSVIV---ANVSKYIVSGTPTF--VPYEVKVQALND 802
Query: 471 VGPGPE-SEVV 480
+G PE SEV+
Sbjct: 803 LGYAPEPSEVI 813
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G+P W + G L + +R F ++ T++ ++ E D Y+
Sbjct: 264 LLLECIAAGLPTPVIRWIKEGGELPA--------NRTFFENFKKTLKIIDVSEADSGNYK 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + P GE G T+ C PKP W
Sbjct: 316 CIARNTLGSVHHVISVTV-KAAPYWITAPRNLVLSPGEDG--TLICRANGNPKPSISWLA 372
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RK+ + ++ S V S +Y C A+N +G + + VL
Sbjct: 373 NGVPIAIAPEDPSRKV-DGDTIIFSQVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 428
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I A++ Q+ A + LLD AY + GV+ + NE
Sbjct: 429 ----PPRILTPANKLYQV--IADSPALLDCAYFGSPKPEIEWFKGVKGSILRGNEY---- 478
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A AG Y CV ++ +GKI + + ++ P
Sbjct: 479 VFHDNGTLEIPVAQKNSAGTYTCVARNELGKIQNEVQLEIKDP 521
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 118/295 (40%), Gaps = 26/295 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + + Q L + +N +
Sbjct: 53 VDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDK---DAQVTMKPNSGTLVVNIMNGGKA 109
Query: 61 PA---MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
A +YQC A+N+ S+ + + P + K LE + EG ++ + C P
Sbjct: 110 EAYEGIYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-NHVREGDSLVLHCRPPVGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D ++ + NG+L S V +D+ Y C A H + +
Sbjct: 169 PPPIIFWMDNAFQRLPQSERVSQGLNGDLYFSNVQPEDTREDYICYARFNHTQTIQQKQP 228
Query: 175 I---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-------YIWTHNGVRIG 224
I V E+ P +T + ++ + L +A W G G
Sbjct: 229 ISVKVFSTKPVTERQPVLLTPTGSTSTKVELRGNVLLLECIAAGLPTPVIRWIKEG---G 285
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N N L+I + S AD+G Y+C+ ++T+G + +V V+ P
Sbjct: 286 ELPANRTFFENFK---KTLKIIDVSEADSGNYKCIARNTLGSVHHVISVTVKAAP 337
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 20/232 (8%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG VQV ++ T A + W G G + ++K+ + + S I K
Sbjct: 825 PGNVQVHVINSTLAKVHWDPVPLKTVRGHLQGYKVYYWKVQSLSRR-------SRRHIEK 877
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S+Y+ V N G G P+SP +NTP P +PS +
Sbjct: 878 KILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEG-PASPDKVFNTPEGVP-SSPSFLK 935
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ L++ W N Y + ++ N+T ++ + + + +
Sbjct: 936 ITNPTLDSLTLEWG--SPTHPNGVLTSYTLKFQPINNTHELGPLVEIKIPANESSLILKN 993
Query: 455 EFYYTEYEVKVQAINDVGPGPE--SEVVTIWHDPLVIISYVCQGDLKLCLPR 504
Y T Y+ A VG G + E VTI + ++ V G ++ PR
Sbjct: 994 LNYSTRYKFYFNAQTSVGSGSQITEEAVTIMDEAGILRPAVGAGKVQPLYPR 1045
>gi|221042958|dbj|BAH13156.1| unnamed protein product [Homo sapiens]
Length = 1153
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 825 NDMGFAPEPAVV 836
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLG 532
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|109730333|gb|AAI15737.1| NRCAM protein [Homo sapiens]
Length = 1192
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 806 NDMGFAPEPAVV 817
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLG 513
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|395845548|ref|XP_003795492.1| PREDICTED: protein sidekick-1 [Otolemur garnettii]
Length = 2210
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 207/481 (43%), Gaps = 37/481 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 404 CQAMGVPLPTLQWYKDAVSISK----LQNPRYKVLSSGGLRIQKLCPE-DSGIFQCFASN 458
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP +T +G + C APKP WK++ +I+
Sbjct: 459 EGGEIQTHTYLDVTNIAPVFTQRP--EDTTVTDGMTAILRCEVSGAPKPAITWKRENHIL 516
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + LIV + +
Sbjct: 517 ASGSVQIPRFMLLESGGLQITPVFIQDAGNYTCYAANSEGSLNASAMLIVWN--RTFIVR 574
Query: 187 PPKITIAAHRNL-QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLL 243
PPK + + LRC A + + ++YIW R NM + + I + DG LL
Sbjct: 575 PPKDQVVIKGTMAMLRCGATHDPRITLSYIW-----RKDNMVITPSSSSRIVVEKDGSLL 629
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTD 301
I+ D G+Y C + S G S + V P P + H + + W
Sbjct: 630 -ISQTWSGDIGDYTCNIISEGGNDSRTARLEVIELPHSPQNLLASPNSSHSNTVMLSWVR 688
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
PI +Y I+ + NS W V +G E+ T + L P TY+F+V
Sbjct: 689 PFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGIT-------VSGLTPARTYQFRV 739
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N++G G+ S+ + + P + P P I G + + W+P P + N
Sbjct: 740 CAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRG 799
Query: 422 YKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R E+Q + + + + +T+YE++V A N G G S V
Sbjct: 800 YILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGIFSRAV 856
Query: 481 T 481
T
Sbjct: 857 T 857
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 108/277 (38%), Gaps = 21/277 (7%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++T C A P +++ SW RNG + S L R N + D
Sbjct: 305 SEITLECIASARPVEELSVSWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 354
Query: 63 MYQCRAKNQLKTRYSSAQLRVL--TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y C A + + + A+ R ++P + ES V I C P P
Sbjct: 355 AYVCEATLR-GSSFEPARARAFLSIIEPPYFTAEPESRILVEVEETVDIICQAMGVPLPT 413
Query: 121 FVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V +
Sbjct: 414 LQWYKDAVSISKLQNPRYKVLSSGGLRIQKLCPEDSGIFQCFASNEGGEIQTHTYLDVTN 473
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
+ Q P T+ LRC + + ++ + G++ + + +
Sbjct: 474 IAPVFTQRPEDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVQIPRF----MLL 529
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ G L+IT DAG Y C ++ G ++ +IV
Sbjct: 530 ESGGLQITPVFIQDAGNYTCYAANSEGSLNASAMLIV 566
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P VQV + + T+QW +G P T Y I AR + W + K+
Sbjct: 1896 EGSPGSPRDVQVTK-SASELTLQWAEGRAGNTPTTGYVIEARPSDEGLW-----DMFVKD 1949
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++N L TYEF+V+A NE+GYGEPSSPS + + P+
Sbjct: 1950 IPRSATSYTLSLDN-LRQGVTYEFRVVAVNEVGYGEPSSPSVAVSAQVEAPF 2000
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 103/268 (38%), Gaps = 43/268 (16%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 118 LVLTCLAEGSWPLEFKWMHN----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 165
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R + S+ +A V + P+P+ W
Sbjct: 166 VVRNRMGALLQRKSEVQVAYMGNFMDIDQRKMISQGHAA----VLNLMPITSCPRPQVTW 221
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----- 178
++G+ I R I L+I + D+G Y A N + I L
Sbjct: 222 FREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIYLSIARDI 281
Query: 179 ------GPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
P+ +PP + +A + L C A + +++ W NGVRI
Sbjct: 282 GAPETTAPTIV--VPPGNRSVVAGSSEITLECIASARPVEELSVSWKRNGVRI------- 332
Query: 231 LETPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 333 --TSGLHSFGRRLTISNPTSADTGAYVC 358
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 28/219 (12%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
V EV S +QW G+ PI ++ + R W S + +
Sbjct: 1481 VPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPKGEWQTYSSSI--------SHEAT 1532
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
A I L P+++Y+ ++ A N++G + SS + T D P + P + +
Sbjct: 1533 ACIVERLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1592
Query: 405 ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGNVGIA 448
I W+P E N Y+I++R+ K+ + ++E + + V +
Sbjct: 1593 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGPEAKMLKSPSALRAELTAQSSFKMVNSS 1652
Query: 449 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
E Y YEV + A N +G P S V ++
Sbjct: 1653 STLTTYELTHLKKYRRYEVLMTAYNIIGESPASAPVEVF 1691
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1669 YEVLMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVNPLSASQLEVTWDPPPPESQN 1727
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
YKI +W N E +E +K + +VR+ + +T+Y V + A N G GP
Sbjct: 1728 GNIQGYKIYYWEADNQNE--TEKMKVL-FLPEPMVRLKNLTSHTKYLVSISAFNAAGDGP 1784
Query: 476 ESE 478
+S+
Sbjct: 1785 KSD 1787
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 14/210 (6%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P + EV TS I W I Y+I R +S+ + +G V +
Sbjct: 1374 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLA-SSSPHTFTTVEVGATVRQ 1432
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+T + L+P S Y F++ A G+GEP + ++P P +
Sbjct: 1433 FTATE-------LIPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQA 1484
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 458
++ S+ + +P +P Y+ + R+ E+Q+ + +V F
Sbjct: 1485 EVTARSLQLQWVPGSDGASPIRYFTVQVRELPKGEWQTYSSSISHEATACIVERLRPF-- 1542
Query: 459 TEYEVKVQAINDVGP---GPESEVVTIWHD 485
T Y+++++A ND+G E+E VT D
Sbjct: 1543 TSYKLRLKATNDIGDSDFSSETEAVTTLQD 1572
>gi|444727034|gb|ELW67542.1| Neural cell adhesion molecule L1-like protein [Tupaia chinensis]
Length = 1138
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 203/462 (43%), Gaps = 35/462 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 343 CEAEGEPQPTIKWRVNGSPIDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 396
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + E YA G + + C A+P+ W+K
Sbjct: 397 VHGTILANANIDVVDVRPLIQTE--DEENYATVLGYSAFLHCEYFASPEAIVSWQKVDEA 454
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I NG L I+ + +D+G YSC N G L + + + P
Sbjct: 455 KPLEGRRYHIHGNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TELRVSPK 513
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 514 NPRVPKSHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIMIDGANLTIS 570
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C+ ++ + I+ T V V P P + + E S + W G +
Sbjct: 571 NITLEDQGIYTCLAQTALDSIADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGDDHN 630
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G K+ ++ L P+ Y+F+VIA
Sbjct: 631 SNISEYIVEFEGNREEPGRW---------EELSRVQG-KDTTVVLALAPYVRYQFRVIAV 680
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 681 NEVGRSQPSHPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 740
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+ + E++ ET+ + +R+ + Y Y+V++
Sbjct: 741 TWKPQGAPVEWEEETVTNH------TLRVMTPTVYAPYDVQL 776
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 112/308 (36%), Gaps = 63/308 (20%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+ W ++ + P + D R +N T + N Y+C
Sbjct: 39 CEAKGNPEPTFRWTKDDK-------PFDLSDPRIITSNNSGTFKIPNEGHISHFQGKYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 92 LASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 147
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTA-------------------TN 163
+ I G + + G+L + V DS Y C A +
Sbjct: 148 WMN---IDEG--VYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVNSL 202
Query: 164 VHGMDESKGRLIVLHGPSYYEQ-----LPP-------KITIAAHRNLQLRCSAHTEELLD 211
H D S I S ++ LPP ITI L L C A E L
Sbjct: 203 KHANDSSSSTEIDSKANSIKQRKPRLLLPPTESGRESSITILKGNTLLLECFA--EGLPT 260
Query: 212 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 271
W ++G E ET DG +L+I N S+ D G Y C + +G +
Sbjct: 261 PQVDWN----KMGGALPKERETEKN--DGNILKIENVSYQDKGNYRCTASNFLGTATHDF 314
Query: 272 TVIVEGPP 279
V VE PP
Sbjct: 315 HVTVEEPP 322
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Query: 84 LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN 143
L L P+ R ES +G + + C E P P+ W K G + R +GN
Sbjct: 228 LLLPPTESGR--ESSITILKGNTLLLECFAEGLPTPQVDWNKMGGALPKE-RETEKNDGN 284
Query: 144 LL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
+L I VS D G Y CTA+N G + + + P ++ + P + + L C
Sbjct: 285 ILKIENVSYQDKGNYRCTASNFLGT-ATHDFHVTVEEPPHWTKKPQSGVYSTGSSGILLC 343
Query: 203 SAHTEELLDVAYIWTHNGVRIGN 225
A E + W NG I N
Sbjct: 344 EAEGEPQPTIK--WRVNGSPIDN 364
>gi|109731501|gb|AAI14571.1| NRCAM protein [Homo sapiens]
Length = 1180
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 471 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 528 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 581 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 806 NDMGFAPEPAVV 817
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 269 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 321
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 322 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 378
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 379 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 437
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 438 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 488
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 489 GTLEIPVAQKDSTGTYTCVARNKLG 513
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 342
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|390466861|ref|XP_003733663.1| PREDICTED: neuronal cell adhesion molecule [Callithrix jacchus]
Length = 1304
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 206/492 (41%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVITNRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM ++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKD-----NEELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVTAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
NDVG PE VV
Sbjct: 825 NDVGFAPEPAVV 836
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 108/278 (38%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + +L + ++ Y L I +++ E D YQC
Sbjct: 288 LLLECIAEGLPTPLIYWAKEDGILPT------NRTSYKNFKKTLQITHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + +R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVITNRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 545
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 105 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 161
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 285 GNVLLLECIAEGLPTPLIYWAKEDGILPT--NRTSYKNFKKTLQITHVSEADSGNYQCIA 342
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 282 PGGVQVVEVHKTSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG VQV V+ T A + W + G + Y+I NS N I K++
Sbjct: 849 PGNVQVNVVNSTLAEVHWDPVPLKSIRGH-LQGYRIYYWKTQNSPKRN--RRHIEKKILT 905
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+ G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 906 FQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLKIVNP 963
Query: 399 KIGDLSISWEP 409
+ L++ W+P
Sbjct: 964 TLDSLTLEWDP 974
>gi|119603834|gb|EAW83428.1| neuronal cell adhesion molecule, isoform CRA_b [Homo sapiens]
Length = 1305
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 484 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 541 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 594 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 653
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 654 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 703
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 704 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 763
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 764 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 818
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 819 NDMGFAPEPAVV 830
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 282 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 334
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 335 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 391
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 392 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 450
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 451 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 501
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 502 GTLEIPVAQKDSTGTYTCVARNKLG 526
>gi|119603833|gb|EAW83427.1| neuronal cell adhesion molecule, isoform CRA_a [Homo sapiens]
Length = 1181
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 352 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 405
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 406 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 464
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 465 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 521
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 522 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 575 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 634
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 635 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 684
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 685 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 744
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 745 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 799
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 800 NDMGFAPEPAVV 811
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 263 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 315
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 316 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 372
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 373 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 431
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 432 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 482
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 483 GTLEIPVAQKDSTGTYTCVARNKLG 507
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 168 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S E+ P +T + + L L C A E L W
Sbjct: 228 ISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIA--EGLPTPIIYWAKED-- 283
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I + S AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 284 -GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAP 336
>gi|292619688|ref|XP_693332.4| PREDICTED: protein sidekick-2 [Danio rerio]
Length = 2181
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 202/483 (41%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP W+++ ++ P++ + L + L P+ D M+QC A+N
Sbjct: 317 CQARGVPQPDIVWYKDAVPIS----PVKTPRYRVLSGGSLQVNGLLPD-DTGMFQCFARN 371
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
Q ++ L V ++ P+ P S++ +G +V + C AP+P W+K ++
Sbjct: 372 QAGEVQTNTYLAVTSIAPNITAGP--SDSTVIDGMSVILHCETSGAPRPAITWQKGERVL 429
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C A+N G+DE+ L+V +
Sbjct: 430 ASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASADLVVW-ARTRITNP 488
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + V ++W +G I L P + +D G L I
Sbjct: 489 PQDQSVIKGTKATMTCGVTHDPSVSVRFVWEKDGQVIVTQGL-----PRLRLDVNGTLHI 543
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P V K + + W
Sbjct: 544 SQTWSGDIGTYTCRVTSVGGNDSRNAHLRVRQLPHAPENPSAVLSSTEKRAINLTWAKPF 603
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W + ++ + A N L+P +Y+F++ A
Sbjct: 604 DGNSPLIRYILEVSEN-NAPWTVLLANIEPEST--------AVTVNGLIPARSYQFRLCA 654
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 655 VNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYI 714
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I +R D ++ K N + + + +T YE++V A N G G V
Sbjct: 715 IRYRLTGLPVDIQY-----KNISNPDVTNLLLEDLIIWTNYEIEVAAYNGAGLGVYCHKV 769
Query: 481 TIW 483
T W
Sbjct: 770 TEW 772
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 148/388 (38%), Gaps = 70/388 (18%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD---PAM 63
L TC A G + + W N ++E I L RYL P D
Sbjct: 31 LVLTCMAEGSWPLEFKWIHN----DTE-----------ITRFSLEYRYLIPSLDRSHAGF 75
Query: 64 YQCRAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV---TIFCNPEAAP 117
Y+C +N+ L R + Q+ + SF++ GEG + I C P
Sbjct: 76 YRCIVRNRVGALLQRRTEVQVAYMG---SFEEGERTQAVSQGEGAVIPAPRIRC----FP 128
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+P+ W +DG I R I + L+I D+G Y A N + G+ I L
Sbjct: 129 QPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTGQHITL 188
Query: 178 H-----GPSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIG 224
GP+ +PP+ T I+ + + C A+ L+ ++ W +G VR G
Sbjct: 189 SVENVGGPADPIAPTIVIPPRNTSVISGTSEVTMECVANARPLIKLSISWKKDGVLVRSG 248
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGL 281
D N L + + + +D+G YEC + S+V +S + V PP
Sbjct: 249 LSDFNR-----------RLTVLSPAVSDSGFYECEAVLRSSSVPAVSAGAYLHVLEPPQF 297
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
V+ E H T+ + D R + I+ W+ + + + RY
Sbjct: 298 ---VKEPEKHITAEMEKVVDIPCQARGVPQPDIV--------WYKDAVPISPVKTPRYRV 346
Query: 342 RKEASIE-NVLVPWSTYEFKVIAGNELG 368
S++ N L+P T F+ A N+ G
Sbjct: 347 LSGGSLQVNGLLPDDTGMFQCFARNQAG 374
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 220 GVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273
G RI + N T PN+ ++ +T + E ++ G+ ++
Sbjct: 914 GYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQLSSST 970
Query: 274 IVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFN 326
I G PP LPG + + + + T+Q+ G I+ +++ A+ N W
Sbjct: 971 ISSGVPPELPGPPTNLAISNIGPRTVTLQFKPGYDGKTSISRWQVEAQVGVIGENEDWVM 1030
Query: 327 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
V H E D S+E + L P++ Y F++ N +G PS PS + T
Sbjct: 1031 V--HQRANEPD------ARSLEVSGLNPYTFYRFRMRQVNIVGTSPPSQPSRKIQTLQAP 1082
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYG 443
P AP+ + L + W PLP + N ++ Y++ + + T S+ L
Sbjct: 1083 PDMAPANVTLRTASETSLWLRWVPLPEWEYNGNPDSVGYRVQYSR---TGAPSKAL---- 1135
Query: 444 NVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ + R+ EF +TEYEV+VQAIN +G GP S+ V
Sbjct: 1136 -LHVIADRLEREFTIEDLEEWTEYEVRVQAINGIGAGPWSQPV 1177
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 35/211 (16%)
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIAR----TNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
V S + W G+ PI +Y + R NW +VS VDR
Sbjct: 1400 VQARSVLLSWEPGSDGLSPIRYYTVQVRELPEKNWTVHSASVSHESSSYIVDR------- 1452
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
L P+++Y+F+V A N++G + S S T D P ++P+ + + I
Sbjct: 1453 -----LKPFTSYQFRVKATNDIGDSDYSQESEAITTLQDAPDESPTILTVTPHTTTSVLI 1507
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-------- 457
W+P P EK N + ++I +R+ +S ++ + + + S +
Sbjct: 1508 CWQPPPEEKINGILLGFRIRYRELLYDRLRSFSVHTISSASASWAELTSPYSMRNLSEPS 1567
Query: 458 -----------YTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1568 LTQYELDNLLKHKRYEIRMSVYNAVGEGPTS 1598
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G SSP + A P P + ++W+P P E QN
Sbjct: 1582 YEIRMSVYNAVGEGPTSSPQEVFVGEA-VPTAPPQNVIIQSATATQFDVTWDPPPLETQN 1640
Query: 417 APNIYYKIF---WRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKIF +++KN+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1641 GDIQGYKIFFWEYQRKNETEKLRTLFLPEGG------VKLKNLTGYTTYMISVAAFNAAG 1694
Query: 473 PGPES 477
GP S
Sbjct: 1695 DGPRS 1699
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + Y++ +RT S
Sbjct: 1079 LQAPPDMAPANVTLRTASETSLWLRWVPLPEWEYNGNPDSVGYRVQYSRTGAPSKAL--- 1135
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HVI ++R E +IE+ L W+ YE +V A N +G G S P + T P
Sbjct: 1136 LHVIADRLER-----EFTIED-LEEWTEYEVRVQAINGIGAGPWSQPV-RGRTRESVPSC 1188
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGI 447
P+ + + + W +P +N + YK+ +++K+ D+ Q T++ GN
Sbjct: 1189 GPTNVSAFATTSSSILVRWFEVPEPDRNGLILGYKVAYKEKDSDSPLQFWTVE--GNASH 1246
Query: 448 AVVRIPSEFYYTEYEVKVQAINDVGPG 474
+ V++ Y YE++V A +G G
Sbjct: 1247 S-VQLTGLGKYVLYEIQVLAFTRIGDG 1272
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + ++ TI W +G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1820 ISRYGSALTIHWANGDPGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFNMDILK 1878
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPS 373
+ V +Y+F+VI N+ GYG PS
Sbjct: 1879 QGV-----SYDFRVIGVNDYGYGSPS 1899
>gi|119603836|gb|EAW83430.1| neuronal cell adhesion molecule, isoform CRA_d [Homo sapiens]
Length = 1084
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 262 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 315
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 316 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 374
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + +
Sbjct: 375 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDA-T 431
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 432 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 484
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 485 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 544
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 545 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 594
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 595 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 654
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 655 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 709
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 710 NDMGFAPEPAVV 721
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 26/265 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 173 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 225
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 226 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 282
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 283 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 341
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 342 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 392
Query: 241 GLLEITNASFADAGEYECVVKSTVG 265
G LEI A G Y CV ++ +G
Sbjct: 393 GTLEIPVAQKDSTGTYTCVARNKLG 417
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 734 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 786
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 787 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 844
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 845 IVNPTLDSLTLEWDP 859
>gi|1480094|emb|CAA99303.1| neuron-glia cell adhesion molecule (Ng-CAM) [Gallus gallus]
Length = 1280
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 196/474 (41%), Gaps = 30/474 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ L +R +++ L + L P D A+ QC A+N
Sbjct: 350 CEVGGKPRPQIQWSINGVPIDA----LPGAERRWLRGGALVLPELRPN-DSAVLQCEARN 404
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NI 129
+ ++A L V+ L P E E V + C AP P W
Sbjct: 405 RHGRLLANAFLHVVEL-PVRMLTADEQRYEVVENQTVFLHCRTFGAPAPNVEWLTPTLEP 463
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
R +F NG+L +S V D G+Y+C A N H + S L+ + P+ P
Sbjct: 464 ALQDDRSFVFTNGSLRLSAVRGGDGGVYTCMAQNAHS-NGSLTALLEVRAPTRISAPPRS 522
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
T + C A + + + W G + + P ++ L ++N
Sbjct: 523 ATAKKGETVTFHCGATFDPAVTPGELRWLRGGQPLPD-------DPRYSVAAETLTVSNV 575
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
+ D G +C + + + + V G PG +QV+EV + + WT G + P
Sbjct: 576 DYGDEGTIQCRASTPLDSAEAEAQLRVVGRPGPIRDLQVMEVDEHRVRLSWTPGDDHNSP 635
Query: 309 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT--GRKEASIENVLVPWSTYEFKVIAGNE 366
I + + S G+ +R T G + + L P+ + F+V+A N
Sbjct: 636 IEKFVVKEEEGIFSA---------GRFAERLTVPGGQPWTPPLPLSPYGRFRFRVVAVNA 686
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
G GE S+PS TP P + P + G G + G+L I+WEPLP + NAP + Y++ W
Sbjct: 687 YGRGEHSAPSAPIETPPAAPERNPGGVHGEGNETGNLVITWEPLPPQAWNAPWVRYRVQW 746
Query: 427 RKKNDTEFQSETLKEY---GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
R + + V V + ++ ++++VQA+N G GPE+
Sbjct: 747 RPLEEPGGGGPSGGFPWAESTVDAPPVVVGGLPPFSPFQIRVQAVNGAGKGPEA 800
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 95/252 (37%), Gaps = 23/252 (9%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
D S ++G L S + + Y + L R + +++P + N +++R
Sbjct: 179 DERVSMGQDGNLYFSNAMVGDSHPDYICHAHFLGPRTII-QKEPLDLRVAPSNAVRSR-- 235
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 137
R L P R ++ T A GG+V + C E P P W++ + G R
Sbjct: 236 ----RPRLLLP----RDPQTTTIALRGGSVVLECIAEGLPTPWVRWRR---LNGPLPTRA 284
Query: 138 IFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 195
EN N L + V+ D G Y C A N G + V P Y+ + P
Sbjct: 285 ALENFNKTLRLWGVTESDDGEYECVAENGRGTARGTHSVTVEAAP-YWVRRPQSGVFGPG 343
Query: 196 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 255
+L C + + W+ NGV I + E + GG L + D+
Sbjct: 344 ETARLDCEVGGKPRPQIQ--WSINGVPIDALPGAERRW----LRGGALVLPELRPNDSAV 397
Query: 256 YECVVKSTVGKI 267
+C ++ G++
Sbjct: 398 LQCEARNRHGRL 409
>gi|348568095|ref|XP_003469834.1| PREDICTED: neuronal cell adhesion molecule isoform 6 [Cavia
porcellus]
Length = 1192
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 207/493 (41%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + +E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D+SG Y+C A N G+ +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ P + + C + L W + + N + +D
Sbjct: 528 RILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE-------RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L +T+ +D G Y CV +T+ ++S + V P P P +++ +
Sbjct: 581 HLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVVT 481
N +G PE VVT
Sbjct: 806 NVMGFAPEPAVVT 818
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP +R F ++ T++ + E D YQ
Sbjct: 269 LSLECIAEGLPTPLIYWIKE-----DGTLP---ANRTFYRNFQKTLQIIQVSEADSGNYQ 320
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + V P + P GE G T+ C PKP+ W
Sbjct: 321 CIAKNTLGIIRHTISVTV-KAAPYWIMAPRNLVLSPGEDG--TLICRANGNPKPRISWLT 377
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I R+I + ++ S V S +Y C A+N +G + + VL
Sbjct: 378 NGVPTEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVL----- 431
Query: 183 YEQLPPKIT-------IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
+LP +T + A+R L C+ L + + G + + D+ +
Sbjct: 432 -AELPRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVIH--- 486
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI A ++G Y CV ++ +G + + ++ P
Sbjct: 487 ---ENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEIKDP 526
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQPLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGR- 173
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 174 --LIVLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
L V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISLKVISAKSSKERPPTFLTPEGNASRKEELRGNVLSLECIA--EGLPTPLIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I S AD+G Y+C+ K+T+G I +V V+ P
Sbjct: 290 -GTLPANRTFYRNFQ---KTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKAAP 342
>gi|348514834|ref|XP_003444945.1| PREDICTED: neural cell adhesion molecule L1-like protein
[Oreochromis niloticus]
Length = 1331
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 216/485 (44%), Gaps = 37/485 (7%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+D+ C G P +W RNG + + +R + D+ +T+ E D +Y
Sbjct: 420 SDVHIKCSVSGKPQPAITWRRNGVMFRDDP-----DNRMQVFDDTVTLLNAKAE-DSGVY 473
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKFVW 123
QC A N+ T ++ + ++ + P ++ YA G +T+ C+ ++P W
Sbjct: 474 QCEASNRHGTILANVNIMIMNMAPLILTE--NNQEYAVVVGKEITMNCSVFSSPPSSISW 531
Query: 124 KKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
KD N I G R FE+G +L I + DSG Y+C A+N+ G L V
Sbjct: 532 TKDENAI-EGERFLAFESGQSLRIINAEKGDSGKYTCVASNMEGSSTVTAVLDVKDATKI 590
Query: 183 YEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMDLNELETPNINID 239
PP+ T + + + +L C + L + +W + I L+ + ++
Sbjct: 591 VS--PPQNTQVDSGKLAKLMCETEYDASLQDTFELVWRKDNKEI---PLSSDKHSRYSVK 645
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK-TSATIQ 298
G +LEI N + +D G Y C ++++ + S + V P P +++ E+ + +
Sbjct: 646 GAMLEIMNVNLSDQGRYTCTARTSLDEDSATAVLTVRDVPDAPIKLELSELDSPRNVVLS 705
Query: 299 WTDGATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
W G+ + +T + + N W W KE+ R TG +A+ E L
Sbjct: 706 WIPGSDHNSTVTEFVVEYEENRWEPGRW---------KELQRVTG-NQATAELKLYGNLN 755
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+V A N +G G PS P+ ++ TP P + P I G + ISWEPL ++N
Sbjct: 756 YQFRVYAVNAIGPGPPSEPTERHKTPPAAPDRNPENIKIQGHHPHQMEISWEPLSPLERN 815
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
P YK+ +R+ + +E + V +V + + + YE+K+ + N G GPE
Sbjct: 816 GPGFEYKVKYRQLGVEDNFTEHM-----VNRSVFLVNNTPTFVPYEIKILSRNSYGWGPE 870
Query: 477 SEVVT 481
+ VT
Sbjct: 871 PKPVT 875
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 117/272 (43%), Gaps = 23/272 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C G P + W + GE+++ ++ + +L++ + E D Y
Sbjct: 331 DLQLECIPEGFPTPSVKWIKMGEVMSPRV-------KFNNYNKLLSLSAVE-ESDEGKYM 382
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N + + ++ P + P +S+ G +V I C+ P+P W++
Sbjct: 383 CTAENSVGKAVHYFDV-IVEEPPKWLTEPPQSQLTV-IGSDVHIKCSVSGKPQPAITWRR 440
Query: 126 DGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSY 182
+G + R ++F++ L++ +DSG+Y C A+N HG + +++++ P
Sbjct: 441 NGVMFRDDPDNRMQVFDDTVTLLN-AKAEDSGVYQCEASNRHGTILANVNIMIMNMAPLI 499
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ + + + + + CS + ++ WT + I E+ G
Sbjct: 500 LTENNQEYAVVVGKEITMNCSVFSSPPSSIS--WTKDENAIEGERFLAFES------GQS 551
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVI 274
L I NA D+G+Y CV + G ST T V+
Sbjct: 552 LRIINAEKGDSGKYTCVASNMEGS-STVTAVL 582
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 187/503 (37%), Gaps = 59/503 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++T C F P + SW ++ + E R+ ++ ++R +N E+ D Y
Sbjct: 514 EITMNCSVFSSPPSSISWTKDENAIEGE--------RFLAFESGQSLRIINAEKGDSGKY 565
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE--AAPKPKF- 121
C A N SS VL +K + K T G + C E A+ + F
Sbjct: 566 TCVASNM---EGSSTVTAVLDVKDATKIVSPPQNTQVDSGKLAKLMCETEYDASLQDTFE 622
Query: 122 -VWKKDGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
VW+KD I R + L I V+ D G Y+CTA D + L V
Sbjct: 623 LVWRKDNKEIPLSSDKHSRYSVKGAMLEIMNVNLSDQGRYTCTARTSLDEDSATAVLTVR 682
Query: 178 HGPSYYEQLPPKITIA---AHRNLQLR---CSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
P P K+ ++ + RN+ L S H + + + N G EL
Sbjct: 683 DVP----DAPIKLELSELDSPRNVVLSWIPGSDHNSTVTEFVVEYEENRWEPGRW--KEL 736
Query: 232 ETPNINIDGGLLEI-TNASFADAGEYECVVKSTVGK-ISTKTTVIVEGPPGLPG----GV 285
+ N L++ N ++ ++ + +G ++ T + PP P +
Sbjct: 737 QRVTGNQATAELKLYGNLNY----QFRVYAVNAIGPGPPSEPTERHKTPPAAPDRNPENI 792
Query: 286 QVVEVHKTSATIQWTDGATNGR--PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
++ H I W + R P YK+ R N +EH++ + V
Sbjct: 793 KIQGHHPHQMEISWEPLSPLERNGPGFEYKVKYRQL--GVEDNFTEHMVNRSV------- 843
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ N + YE K+++ N G+G P Y+ D P AP I L
Sbjct: 844 --FLVNNTPTFVPYEIKILSRNSYGWGPEPKPVTGYSG-EDVPTAAPRDIAVEVINTTVL 900
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYT 459
+SW P+P Y + W ++ + L ++ + R +P ++
Sbjct: 901 RVSWTPVPPATVRGRLGGYNVHWVRRRSLLNPDKILDLSHSMSFSGNRSHVIVPGLEPFS 960
Query: 460 EYEVKVQAINDVGPGPESEVVTI 482
EY++ V N G GP+S+ VT
Sbjct: 961 EYKLTVYVFNKKGNGPKSDPVTF 983
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 12/183 (6%)
Query: 95 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS--PVSRD 152
+++E +G ++ + C PE P P W K G ++ R F N N L+S V
Sbjct: 320 VQTEKVLLKGEDLQLECIPEGFPTPSVKWIKMGEVMSP---RVKFNNYNKLLSLSAVEES 376
Query: 153 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 212
D G Y CTA N G +IV P + + P ++ ++CS +
Sbjct: 377 DEGKYMCTAENSVGKAVHYFDVIVEEPPKWLTEPPQSQLTVIGSDVHIKCSVSGKP--QP 434
Query: 213 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272
A W NGV + N ++ + + + NA D+G Y+C + G I
Sbjct: 435 AITWRRNGVMFRDDPDNRMQ-----VFDDTVTLLNAKAEDSGVYQCEASNRHGTILANVN 489
Query: 273 VIV 275
+++
Sbjct: 490 IMI 492
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 122/288 (42%), Gaps = 28/288 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C+A G P Y W ++G+ P ++ + +L ++ + + Y+C
Sbjct: 130 ITVKCKARGNPPPEYRWEKDGQAF---VPPNFNRFKANHTKGLLVLQSEDMSKFQGKYRC 186
Query: 67 RAKNQLKTRYSSA-QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-- 123
A N+L T ++ +++ ++ P F K L + EG +T+ CNP P+ ++
Sbjct: 187 YASNKLGTAMTNEIEIKAFSI-PKFPKETL-NPIVVSEGEPITLKCNPPEGVAPRLIYWM 244
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLHGP 180
D I R + +GNL S ++DS Y C A + + + +V+
Sbjct: 245 TVDLQHIEQDERVSMGTDGNLYFSNAIQNDSRQDYGCFAAFNRIRTIVQKTAMAVVVK-- 302
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELL----DVAYIWTHNGV---RIGNMDLNELET 233
+ P I + L L TE++L D+ G + + + E+ +
Sbjct: 303 ---RSVAPPARIPS---LLLPSGVQTEKVLLKGEDLQLECIPEGFPTPSVKWIKMGEVMS 356
Query: 234 PNINIDG--GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P + + LL ++ +D G+Y C +++VGK VIVE PP
Sbjct: 357 PRVKFNNYNKLLSLSAVEESDEGKYMCTAENSVGKAVHYFDVIVEEPP 404
>gi|2511666|emb|CAA04507.1| NrCAM protein [Homo sapiens]
Length = 1299
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 207/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 372 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 425
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 426 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIQWF 484
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 485 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 541
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 542 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 594
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 595 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPLDLELTDQL 654
Query: 292 KTSATIQWTDGATNGRPIT--HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT H + + W + +E + + +
Sbjct: 655 DKSVQLSWTPGDDNNSPITTIHDEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 704
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 705 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 764
Query: 410 LPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K D E+ S + NV +V F Y +KVQA+
Sbjct: 765 LNGFEFNGPGLQYKVSWRQKVGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 819
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 820 NDMGFAPEPAVV 831
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 283 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 335
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 336 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 392
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 393 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 451
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 452 --LTPANTLYQVIANRPALLDCAFFGSPLPTIQWFKGAKGSAL-HEDIYVLH------EN 502
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 503 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 540
>gi|348568091|ref|XP_003469832.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Cavia
porcellus]
Length = 1211
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 207/493 (41%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + +E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D+SG Y+C A N G+ +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ P + + C + L W + + N + +D
Sbjct: 547 RILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE-------RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L +T+ +D G Y CV +T+ ++S + V P P P +++ +
Sbjct: 600 HLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVVT 481
N +G PE VVT
Sbjct: 825 NVMGFAPEPAVVT 837
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQPLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 IVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE- 232
I L S E TIAA+ + + + ++E N R + N L
Sbjct: 234 ISLKVISVDEL---NDTIAANLSDTEFYGAKSSKERPPTFLTPEGNASRKEELRGNVLSL 290
Query: 233 --------TPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
TP I DG L L+I S AD+G Y+C+ K+T+G I
Sbjct: 291 ECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIR 350
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 351 HTISVTVKAAP 361
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 13/165 (7%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 343
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 221
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 400
Query: 222 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
I D P+ IDG + +N + Y+C + G
Sbjct: 401 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQCNASNEYG 439
>gi|348568093|ref|XP_003469833.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Cavia
porcellus]
Length = 1180
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 207/493 (41%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + +E P +D R D TI + N ER A+Y
Sbjct: 358 DGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFSNVQERSSAVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 412 QCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFFGSPLPTIEWF 470
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D+SG Y+C A N G+ +++ L + P+
Sbjct: 471 KGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPT 527
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ P + + C + L W + + N + +D
Sbjct: 528 RILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE-------RFTVDKD 580
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L +T+ +D G Y CV +T+ ++S + V P P P +++ +
Sbjct: 581 HLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQL 640
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 641 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQTTAQL 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 691 KLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKP 750
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 751 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 805
Query: 469 NDVGPGPESEVVT 481
N +G PE VVT
Sbjct: 806 NVMGFAPEPAVVT 818
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP +R F ++ T++ + E D YQ
Sbjct: 269 LSLECIAEGLPTPLIYWIKE-----DGTLP---ANRTFYRNFQKTLQIIQVSEADSGNYQ 320
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + V P + P GE G T+ C PKP+ W
Sbjct: 321 CIAKNTLGIIRHTISVTV-KAAPYWIMAPRNLVLSPGEDG--TLICRANGNPKPRISWLT 377
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I R+I + ++ S V S +Y C A+N +G + + VL
Sbjct: 378 NGVPTEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVL----- 431
Query: 183 YEQLPPKIT-------IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
+LP +T + A+R L C+ L + + G + + D+ +
Sbjct: 432 -AELPRILTPANTLYQVIANRPAFLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVIH--- 486
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI A ++G Y CV ++ +G + + ++ P
Sbjct: 487 ---ENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEIKDP 526
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQPLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGR- 173
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 174 --LIVLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
L V+ S E+ P +T + + L L C A E L W
Sbjct: 234 ISLKVISAKSSKERPPTFLTPEGNASRKEELRGNVLSLECIA--EGLPTPLIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + N N L+I S AD+G Y+C+ K+T+G I +V V+ P
Sbjct: 290 -GTLPANRTFYRNFQ---KTLQIIQVSEADSGNYQCIAKNTLGIIRHTISVTVKAAP 342
>gi|348568087|ref|XP_003469830.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Cavia
porcellus]
Length = 1304
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 207/493 (41%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + +E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D+SG Y+C A N G+ +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ P + + C + L W + + N + +D
Sbjct: 547 RILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE-------RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L +T+ +D G Y CV +T+ ++S + V P P P +++ +
Sbjct: 600 HLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVVT 481
N +G PE VVT
Sbjct: 825 NVMGFAPEPAVVT 837
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQPLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 IVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE- 232
I L S E TIAA+ + + + ++E N R + N L
Sbjct: 234 ISLKVISVDEL---NDTIAANLSDTEFYGAKSSKERPPTFLTPEGNASRKEELRGNVLSL 290
Query: 233 --------TPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
TP I DG L L+I S AD+G Y+C+ K+T+G I
Sbjct: 291 ECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQKTLQIIQVSEADSGNYQCIAKNTLGIIR 350
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 351 HTISVTVKAAP 361
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 13/175 (7%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 343
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 221
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 400
Query: 222 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I D P+ IDG + +N + Y+C + G + V V
Sbjct: 401 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNV 449
>gi|95007731|dbj|BAE94191.1| L1-like cell adhesion molecule [Dugesia japonica]
Length = 1351
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 215/486 (44%), Gaps = 41/486 (8%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
++CEA G P+ +W NG L++ L Q++ I + + L D A++QC A
Sbjct: 342 FSCEAIGRPNPVITWTVNGVGLDTY---LNGQNKRKIGNTIYLTNLL--PGDHAVFQCNA 396
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N + YS+ + VL KP F P ++ E TI C +APK W KDG
Sbjct: 397 SNYIGYDYSNGYINVLRDKPEFINGP-QATLIKAENKPATINCQAFSAPKAIVTWTKDGF 455
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I +GGR I +NG+LLI+ + DSG Y+CTATN++G G +V + P
Sbjct: 456 PI-NGGRYMIQDNGDLLITKLITADSGTYTCTATNLYG--SISGTCVVFVRQRTELMIRP 512
Query: 189 KIT-IAAHRNLQLRCSAHTEEL--LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
T + + ++ C+A T+ L ++ +W + I + E N N+ L I
Sbjct: 513 INTWVYFGQEVKFVCTAKTDRLETQNLKIVWYKDNSPI---TIGPYERTNTNLQDNSLII 569
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV---VEVHKTSATIQWTDG 302
A D G Y C + + T+IV+G P P ++ + A + W G
Sbjct: 570 MGAQTTDTGIYTCNATNGLDFDVAYATLIVQGKPHTPIDIKADCSRFANNREAVVSWNPG 629
Query: 303 ATNGRPITHYKIIARTNWNST-WFNVSEHVIGKEVDRYTGR--KEASIENVLVPWSTYEF 359
A N PI Y + T ++ W+ V ++V + TG + ++ + P+ Y+F
Sbjct: 630 ADNYAPIVMYLVEYSTQFDRKGWYEV------QKVTKITGSTGETVDVKVAMQPFIQYQF 683
Query: 360 KVIAGNELGYGEPSSPSPQ-YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
+V A N +G EPS + + P P + P + G +L I W P+ + AP
Sbjct: 684 RVRAINRVGVSEPSDVTLNPCSLPPTIPNKNPKEVFVYGTAKDNLVIQWTPMTYVEHCAP 743
Query: 419 NIYYKI---------FWRKKNDTEFQS---ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
+ Y I + +T F S + + Y N + V E + +++V +Q
Sbjct: 744 KLVYHITVICITCQSIPKNATNTTFISDWDQNIVTYYNFQLGSVTYDME-SFQQFKVTIQ 802
Query: 467 AINDVG 472
A N++G
Sbjct: 803 AKNEIG 808
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 161/402 (40%), Gaps = 74/402 (18%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDP 61
N L C A G P TY+W +N ++ + + RY N T+ P + D
Sbjct: 40 NLEALMLRCVATGSPSPTYTWLKNNKVFDFSI----NVGRYTKWPNEGTMILALPNDDDD 95
Query: 62 AMYQCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
+YQC A+N YS + +R ++ +FK + E T A +G + + C P P P
Sbjct: 96 GIYQCIAENSHGKAYSIKSNVRRAEIQ-NFKNKDPEKIT-ARQGEYLLLKCEVPVCFPPP 153
Query: 120 KFVWKKDGN----IIGSGGRRKIFENGNLLISPVS-RDDSGIYSCTATNVHGMDESKGR- 173
VW+K N +I + + +GNL I+ ++ DD +SCT N M +K
Sbjct: 154 IVVWQKIKNGIAELIKESSKYVMDIDGNLYITGLTMEDDQAKFSCTVYN-QRMRMTKSDK 212
Query: 174 ---LIVLHGPSYYEQLPPKITIAAHRNLQ-----------LRC--SAHTEELLDVAYIWT 217
+ V+ G S LP + R+LQ LRC S + Y WT
Sbjct: 213 EHWITVIPGQS---NLP---VVLRFRSLQPMNGRVGDKLVLRCILSGYPSP----NYKWT 262
Query: 218 HNGVRIGNMDLNELETPNINID--GGLLEITNASFADAGEYECVVKSTVGKIS--TKTTV 273
G D + LE PN D G +L I + AD ++C ++ V I V
Sbjct: 263 VKG-----QDKSILERPNFITDAGGAILIINPVTTADQDTFQCTGENAVSNIPIVIDFQV 317
Query: 274 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 333
VE P ++ + A + + NG + + I R N TW V G
Sbjct: 318 NVEMTP-------ILTTKLSDANVPY-----NGSHVFSCEAIGRPNPVITW-----TVNG 360
Query: 334 KEVDRY-TGRKEASIENV-----LVPWSTYEFKVIAGNELGY 369
+D Y G+ + I N L+P F+ A N +GY
Sbjct: 361 VGLDTYLNGQNKRKIGNTIYLTNLLPGDHAVFQCNASNYIGY 402
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPERDPAMYQ 65
T C+AF P +W ++G +N RY IQDN +L + + D Y
Sbjct: 435 TINCQAFSAPKAIVTWTKDGFPING--------GRYMIQDNGDLLITKLIT--ADSGTYT 484
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA----APKPKF 121
C A N L S + + + RP+ + Y G+ V C + K
Sbjct: 485 CTATN-LYGSISGTCVVFVRQRTELMIRPINTWVYFGQ--EVKFVCTAKTDRLETQNLKI 541
Query: 122 VWKKDGNIIGSGGRRKI---FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
VW KD + I G + ++ +L+I D+GIY+C ATN D + LIV
Sbjct: 542 VWYKDNSPITIGPYERTNTNLQDNSLIIMGAQTTDTGIYTCNATNGLDFDVAYATLIVQG 601
Query: 179 GP 180
P
Sbjct: 602 KP 603
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI----IGSGGRRKIFENGN 143
PSF +P ++E Y + + C +P P + W K+ + I G K G
Sbjct: 26 PSFVYQPNKNEVYQNLEA-LMLRCVATGSPSPTYTWLKNNKVFDFSINVGRYTKWPNEGT 84
Query: 144 LLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
++++ + DD GIY C A N HG S K + ++ + P KIT L L+C
Sbjct: 85 MILALPNDDDDGIYQCIAENSHGKAYSIKSNVRRAEIQNFKNKDPEKITARQGEYLLLKC 144
>gi|348568089|ref|XP_003469831.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Cavia
porcellus]
Length = 1256
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 207/493 (41%), Gaps = 49/493 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + +E P +D R D TI + N ER A+Y
Sbjct: 371 DGTLICRANGNPKPRISWLTNG--VPTEIAP-DDPSRRIDGD---TIIFSNVQERSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 425 QCNASNEYGYLLANAFVNVLAELPRILT-PANTLYQVIANRPAFLDCAFFGSPLPTIEWF 483
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D+SG Y+C A N G+ +++ L + P+
Sbjct: 484 KGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEVHLEI-KDPT 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ P + + C + L W + + N + +D
Sbjct: 541 RILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE-------RFTVDKD 593
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L +T+ +D G Y CV +T+ ++S + V P P P +++ +
Sbjct: 594 HLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYDVPSPPFDLELTDQL 653
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 654 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQTTAQL 703
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 704 KLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVITWKP 763
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 764 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 818
Query: 469 NDVGPGPESEVVT 481
N +G PE VVT
Sbjct: 819 NVMGFAPEPAVVT 831
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 117/314 (37%), Gaps = 45/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLIINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G + + C P
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLQN-GQPLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 168 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 175 IVL---------------------HGPSYYEQLPPKITIA---AHRNLQLRCSAHTEELL 210
I L +G ++ PP A R +LR + + E +
Sbjct: 228 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNASRKEELRGNVLSLECI 287
Query: 211 DVAY-----IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
W G + N N L+I S AD+G Y+C+ K+T+G
Sbjct: 288 AEGLPTPLIYWIKED---GTLPANRTFYRNFQ---KTLQIIQVSEADSGNYQCIAKNTLG 341
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 342 IIRHTISVTVKAAP 355
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 13/175 (7%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 337
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 221
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 394
Query: 222 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I D P+ IDG + +N + Y+C + G + V V
Sbjct: 395 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNV 443
>gi|344236690|gb|EGV92793.1| Neurofascin [Cricetulus griseus]
Length = 1279
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 216/507 (42%), Gaps = 72/507 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 378 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 429
Query: 68 AKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF--- 121
N+ ++A + VL + P S + + + Y + F +P + F
Sbjct: 430 TSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRCPFSVC 489
Query: 122 ------VWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
V K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++
Sbjct: 490 CVRCSIVRFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 547
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNE 230
RL V P+ ++P + +QL C + L + W + + IGN E
Sbjct: 548 RLEV-KDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKE 606
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV--------------- 275
++ L I + D G Y C+ + + + K + V
Sbjct: 607 DDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALP 657
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
+G P P +++ ++ + S + W G N PIT Y I + F + +
Sbjct: 658 KGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVI----QFEEDQFQPG---VWHD 710
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G
Sbjct: 711 HSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKG 769
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IP 453
G + ++ I+W P+ PN+ Y + WR++ ET + + NV + R +
Sbjct: 770 EGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVG 822
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEVV 480
Y YE++VQA ND G GPE + +
Sbjct: 823 QTPVYVPYEIRVQAENDFGKGPEPDTI 849
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 115/309 (37%), Gaps = 44/309 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 47 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 104 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 162
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 163 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 222
Query: 173 -RLIVLHGPSYYE---QLPPKITIAAHRNLQLR--------------------CSAHTEE 208
L VL Y + + P I A L C++
Sbjct: 223 FTLKVLTNNPYNDSSLRNHPDIYSVAKECLVFLGQPSDSAFAGFGKAAGPIICCASEPSP 282
Query: 209 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268
D+A W G G++ ++ + N N L ITN S D+GEY C+ + +G I
Sbjct: 283 TPDIA--WYKKG---GDLPSDKTKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIR 334
Query: 269 TKTTVIVEG 277
+V V+
Sbjct: 335 HTISVRVKA 343
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 75/194 (38%), Gaps = 22/194 (11%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSC 159
G+ I C E +P P W K G + S + FEN N L I+ VS +DSG Y C
Sbjct: 267 GKAAGPIICCASEPSPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFC 324
Query: 160 TATNVHGMDESKGRLIV-----------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 208
A+N G + V L Y+ P + +A + +L C A+
Sbjct: 325 LASNKMGSIRHTISVRVKACAIYICLPCLSAAPYWLDEPKNLILAPGEDGRLVCRANGNP 384
Query: 209 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268
V W NG + + N PN + G + + + Y+C + G +
Sbjct: 385 KPTVQ--WMVNGEPLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLL 438
Query: 269 TKTTV-IVEGPPGL 281
V +++ PP +
Sbjct: 439 ANAFVSVLDVPPRM 452
>gi|351708733|gb|EHB11652.1| Neural cell adhesion molecule L1, partial [Heterocephalus glaber]
Length = 1214
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 207/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P +W NG + L+ Y I L + + P D + QC A+N
Sbjct: 353 CQAQGRPQPEVTWRINGNRMEE----LDKDQTYQIHRGALILSNVQPS-DTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L +++TY A EG + C AP P W ++G
Sbjct: 408 RHGLLLTNAYIYVVQLPAKILTS--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV-LH--GPSYYEQ 185
+ R + NG + I + +D+G Y C A N D++ ++ LH + Q
Sbjct: 466 TVLQDERFFPYANGTMAIRDLQANDTGRYFCQAAN----DQNNVTIVANLHVKEATQITQ 521
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLE 244
P + C A + L + W +G DL EL ++ I+ G L
Sbjct: 522 GPRNAIEKKGSRVTFTCQASFDPSLQRSITWRGDG-----HDLQELGDSDKYFIEDGRLV 576
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTD 301
I + ++D G Y CV + + ++ + ++V G PG V+V E H + + WT
Sbjct: 577 IDSLDYSDQGNYSCVASTELDEVEGRAQLLVVGSPGPVPHVEVSERHLGKHSQVHLSWTP 636
Query: 302 GATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ I Y I +A W H +GK + S L P+
Sbjct: 637 AEDHNAAIEKYDIEFEDIEMAPEKW---------HSLGK-----VPGNQTSTTLKLSPYV 682
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y F+V A N+ G GEPS PS TP P + P+ + G G + ++ I+W+PL
Sbjct: 683 HYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPADVRGEGNETNNMVITWKPLRWMDW 742
Query: 416 NAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + +Q +T+ + VV S F YE++VQA+N G G
Sbjct: 743 NAPQVQYRVQWRPQGTRGPWQEQTVSD----SFLVVTNTSTF--EPYEIRVQAVNSQGKG 796
Query: 475 PESEVV 480
PE +V
Sbjct: 797 PEPQVT 802
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 180/488 (36%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S +P DR Q++ T++ LN E+D Y
Sbjct: 259 LVLECIAEGFPTPTIKW-----LFPSGPMPA---DRVIYQNHNKTLQLLNVGEQDDGEYH 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + +T++ + G G + C + P+P+ W+
Sbjct: 311 CLAENSLGI---ARHIYYVTVEGTGSPEWRRGCHLYGPGETARLDCQAQGRPQPEVTWRI 367
Query: 126 DGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+GN + + + ++ G L++S V D+ + C A N HG L++ + Y
Sbjct: 368 NGNRMEELDKDQTYQIHRGALILSNVQPSDTMVTQCEARNRHG-------LLLTNAYIYV 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
QLP KI + + + T LL A+ G + ++ + E + D
Sbjct: 421 VQLPAKI-LTSDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 474
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
N + A D G Y C + ++ + V+ + G + + K +
Sbjct: 475 PYANGTMAIRDLQANDTGRYFCQAANDQNNVTIVANLHVKEATQITQGPRNA-IEKKGSR 533
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ P I W ++ E +G + D+Y + + L
Sbjct: 534 VTFTCQASFD-PSLQRSI----TWRGDGHDLQE--LG-DSDKYFIEDGRLVIDSLDYSDQ 585
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A EL E + +P P+ S GK + +SW P E N
Sbjct: 586 GNYSCVASTELDEVEGRAQLLVVGSPGPVPHVEVSE--RHLGKHSQVHLSWTPA--EDHN 641
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNV-GIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
A Y I + D E E G V G Y Y +V AIN GPG
Sbjct: 642 AAIEKYDIEFE---DIEMAPEKWHSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGE 698
Query: 475 --PESEVV 480
P SE V
Sbjct: 699 PSPPSETV 706
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 179/499 (35%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
C+AFG P + W L+ E + +R+F N + IR L D Y C+A
Sbjct: 447 CKAFGAPVPSVQW------LDEEGTTVLQDERFFPYANGTMAIRDLQ-ANDTGRYFCQAA 499
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG 127
N A L V K + + +G VT C P + W+ DG
Sbjct: 500 NDQNNVTIVANLHV---KEATQITQGPRNAIEKKGSRVTFTCQASFDPSLQRSITWRGDG 556
Query: 128 NIIGSGGR--RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ + G + E+G L+I + D G YSC A+ E + +L+V+ P
Sbjct: 557 HDLQELGDSDKYFIEDGRLVIDSLDYSDQGNYSCVASTELDEVEGRAQLLVVGSPG---- 612
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P + R+L H WT ++ ++E +I E+
Sbjct: 613 -PVPHVEVSERHLGKHSQVHLS--------WTPAEDHNAAIEKYDIEFEDI-------EM 656
Query: 246 TNASFADAGEYECVVKSTVGKIST------KTTVIVEGPPGLPGGVQVVEV------HKT 293
+ G+ ST K+S + T I + PG P V K
Sbjct: 657 APEKWHSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKN 716
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
A ++ TN IT +K + +WN+ + V G R +++ ++ L
Sbjct: 717 PADVRGEGNETNNMVIT-WKPLRWMDWNAPQVQYRVQWRPQGT---RGPWQEQTVSDSFL 772
Query: 352 VPWST-----YEFKVIAGNELGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDL 403
V +T YE +V A N G G P PQ + D P +P
Sbjct: 773 VVTNTSTFEPYEIRVQAVNSQGKG----PEPQVTIGYSGEDYPQVSPELEKVKPLNSTAA 828
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV----VRIPSEFYYT 459
+ W+P+ + Y + + + S+ G+V +A V + Y+
Sbjct: 829 LVRWKPVALAQVKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSVILGGLRPYS 888
Query: 460 EYEVKVQAINDVGPGPESE 478
Y V+V+A N G GP +
Sbjct: 889 SYHVEVRAFNGRGSGPAGQ 907
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 114/294 (38%), Gaps = 37/294 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLN-SETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P+V + W ++G SE + + +T +R +Y
Sbjct: 52 DISLKCEARGKPEVQFRWMKDGTHFRPSEEPGVMVHEAPHSGSFTITGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N+L T S + P + K ++ EG +V + CNP + +P ++
Sbjct: 112 RCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NGNL + V + D+ Y C A
Sbjct: 171 MNSKILHIKQDERVSMGQNGNLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKA 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S + + + L L C A + +++
Sbjct: 231 TNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLFPS----- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G M + + N N L++ N D GEY C+ ++++G V VEG
Sbjct: 280 GPMPADRVIYQNHN---KTLQLLNVGEQDDGEYHCLAENSLGIARHIYYVTVEG 330
>gi|334322024|ref|XP_001371400.2| PREDICTED: neurofascin-like [Monodelphis domestica]
Length = 1188
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 209/507 (41%), Gaps = 75/507 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD----- 60
D C A G P T W NG+ L E P + R D ++ RD
Sbjct: 363 DGRLVCRANGNPKPTVQWLVNGDPL--EAAP-PNPSREVAGDTIIF-------RDTQIGS 412
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
A+YQC A N ++A + VL + P P + C +P P
Sbjct: 413 SAVYQCNASNDHGYLLANAFVSVLDVPPRMLS-PRNQLIKVIHYNRTRLDCPFFGSPIPT 471
Query: 121 FVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W K+G GS GG ++ ENG+L ++ ++D GIY+C ATN+ G E++ RL V
Sbjct: 472 LRWFKNGQ--GSNLDGGNYQVHENGSLEMAMARKEDQGIYTCVATNILGKAENQVRLEV- 528
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPN 235
P+ ++P + N+ L C + L + W + + IGN E ++
Sbjct: 529 KDPTRITRVPEDQVVKRGTNVVLECRVKHDPTLKLTVNWLKDDEPLYIGNRMKKEEDS-- 586
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP---------------PG 280
L I + D G Y C+ + + + K + V P
Sbjct: 587 -------LTIFGVADRDQGSYTCMASTELDRDIAKAYLTVLAAQVVPTNRMAPLPKERPD 639
Query: 281 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 338
P +++ ++ + S + W G N PIT Y I + W + S+H
Sbjct: 640 PPRDLELTDLEERSVRLTWIPGDDNNSPITEYIIQFEEDQFQPGVWHSHSKH-------- 691
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
G +++ L P+ Y+F+VIA N++G PS PS +Y T P P + G G
Sbjct: 692 -PGSVNSAVLQ-LSPYVNYQFRVIAVNDVGSSHPSLPSERYRTSGAPPESNPGDVKGAGS 749
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI-----AVVRIP 453
+ ++ I+W P+ PN+ Y + WR++ E + + N + VV+ P
Sbjct: 750 RKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------EGRESWNNATVWGSRYTVVQTP 802
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEVV 480
Y YE++VQA ND G GPE + V
Sbjct: 803 ---VYVPYEIRVQAENDFGKGPEPDTV 826
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 119/314 (37%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 46 VDPRDNILIECEAKGNPTPSFQWTRNSRFFNVAKDPRVSMLR---RSGTLVIDFRSGGRP 102
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 103 EEYEGEYQCFARNKFGTALSNRIFLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 161
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R +NG+L S V D+ YSC A
Sbjct: 162 PSPVIFWMSSSMEPINQDKRVSQGQNGDLYFSNVMLQDAKTDYSCNARFHFTHTIQQKNP 221
Query: 162 ------TNVHGMDES--------KGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAH 205
TN D S R + PS+ L + R +L L C A
Sbjct: 222 FILKVLTNHAHNDSSLRNHTDMYSARGVAERTPSFMYPLGTSSSQMVLRGMDLLLECIAS 281
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
D+A W G G++ +++ N N L ITN S D+GEY C+ + +G
Sbjct: 282 GVPAPDIA--WYKKG---GDLPAGKVKFENFN---KALRITNVSEEDSGEYFCLASNRMG 333
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 334 SIRHTISVRVKAAP 347
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 161
G ++ + C P P W K G + +G + FEN N L I+ VS +DSG Y C A
Sbjct: 271 GMDLLLECIASGVPAPDIAWYKKGGDLPAGKVK--FENFNKALRITNVSEEDSGEYFCLA 328
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 329 SNRMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 385
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 280
+ N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 386 PLEAAPPN----PSREVAGDTIIFRDTQIGSSAVYQCNASNDHGYLLANAFVSVLDVPPR 441
Query: 281 L 281
+
Sbjct: 442 M 442
>gi|351706958|gb|EHB09877.1| Contactin-4 [Heterocephalus glaber]
Length = 544
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 145/309 (46%), Gaps = 7/309 (2%)
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETP 234
V+ P+ P + + ++ L C + LD+ + W+ N I + D + E
Sbjct: 11 VMEDPTRVIVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNEHLIDFDKDGDHFERV 70
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
G L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+
Sbjct: 71 GGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTT 130
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
A + W G N PIT Y I ART ++ W VS + + +D G+ + L PW
Sbjct: 131 AQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPW 185
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
YEF+ +A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E
Sbjct: 186 VEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEEL 245
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
QN Y + +R + L + V R S ++ +EVKV N+ G G
Sbjct: 246 QNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEG 304
Query: 475 PESEVVTIW 483
P S ++
Sbjct: 305 PFSPTTVVY 313
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
+ RY R E+ + P+S +E KV N G G P SP+ + ++P + P+ I
Sbjct: 274 DASRYVFRNES-----VRPFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPAKPPASIF 327
Query: 395 GGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
D+ + W PL + + K +WR +D E + ++ GN +I
Sbjct: 328 ARSLSATDIEVFWASPLGKNRGRIQGYEVK-YWRH-DDKEENARKIRTVGNQ--TSTKIT 383
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ Y + V+A N G GP S V +
Sbjct: 384 NLQGSALYHLAVKAYNSAGTGPSSVTVNV 412
>gi|426227609|ref|XP_004007910.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Ovis aries]
Length = 1211
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 206/497 (41%), Gaps = 55/497 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D T C A G P SW NG + E P +D R D ++ + ER A+
Sbjct: 375 EEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAV 429
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPK 120
YQC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 430 YQCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPA 485
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD GS R I+ ENG L I +D +G Y+C A N GM ++ L +
Sbjct: 486 IEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI- 542
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NI 236
P+ + P + + C + L W D EL +
Sbjct: 543 KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------DHGELPSDGRF 594
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQ 286
+D L + + + D G Y CV +T+ +S + V P P P ++
Sbjct: 595 TVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLE 654
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKE 344
+ + S + WT G N PIT + I + W + +E V G +
Sbjct: 655 LTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGTQT-------- 705
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L
Sbjct: 706 -TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLV 764
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +
Sbjct: 765 ITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLI 819
Query: 464 KVQAINDVGPGPESEVV 480
KVQA+ND G PE V
Sbjct: 820 KVQALNDAGFAPEPAAV 836
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 112/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 288 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIVQVTEADSGNYQ 339
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P E G T+ C PKP+ W
Sbjct: 340 CIAKNSLGAIHHTISVTV-KAAPYWIIAPQNLVLSPEEDG--TLICRANGNPKPRISWLS 396
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 397 NGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ W + G+ ++
Sbjct: 453 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK--GSALREDIYVL 504
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ N G LEI A G Y CV ++ +G + ++ P
Sbjct: 505 HEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 545
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITIAAHRN----------LQLRCS 203
+DE + +G + Q PP L L C
Sbjct: 234 ISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + AD+G Y+C+ K++
Sbjct: 294 A--EGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQIVQVTEADSGNYQCIAKNS 345
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 346 LGAIHHTISVTVKAAP 361
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V V V+ T A + W G G I ++K + N I K
Sbjct: 849 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ WEP
Sbjct: 960 IVNPTLDSLTLEWEP 974
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 343
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NSLGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 400
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|350588950|ref|XP_003482752.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Sus scrofa]
Length = 1211
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 209/495 (42%), Gaps = 55/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER ++Y
Sbjct: 377 DGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFV 122
QC A N+ ++A + VL P + T + F C +P P
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIE 487
Query: 123 WKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 488 WFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KD 544
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NINI 238
P+ + P + + C + L + W D +EL + +
Sbjct: 545 PTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTV 596
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVV 288
D L + + + D G Y CV +T+ +S + V P P P +++
Sbjct: 597 DKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELT 656
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEAS 346
+ S + WT G N PIT + I + W + +E V G + +
Sbjct: 657 DQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------T 706
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+
Sbjct: 707 AQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVIT 766
Query: 407 WEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y VKV
Sbjct: 767 WKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKV 821
Query: 466 QAINDVGPGPESEVV 480
QA+NDVG PE VV
Sbjct: 822 QALNDVGFAPEPAVV 836
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 288 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIIQVTEADSGNYQ 339
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 340 CIAKNTLGAIHHTISVTV-KAAPYWIIAPQNLVLSPGEDG--TLICRANGNPKPRISWLS 396
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 397 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAE--- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A LD A+ + G + + E
Sbjct: 453 ----PPRILTSA--NTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALR----EDIY 502
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I + G LEI A G Y CV ++ +G + + ++ P
Sbjct: 503 ILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 47/315 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMK---TGSGTLTINIMSDGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRS-GQSLVLPCRPPMGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTA------------- 161
P ++ D + ++ + NG+L S V +D+ Y C A
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQP 233
Query: 162 --TNVHGMDESKGRLIV------LHGPSYYEQLPPKITIA---AHRNLQLRCSAHTEELL 210
V +DE + +G + + PP A R +LR + + E +
Sbjct: 234 ISVKVTSVDELNDTIAANLSDTEFYGAKPHRERPPTFLTPEGNASRKEELRGNVLSLECI 293
Query: 211 D------VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
+ Y W G + +N N L+I + AD+G Y+C+ K+T+
Sbjct: 294 AEGLPTPIIY-WIKED---GTLPINRTFYRNFK---KTLQIIQVTEADSGNYQCIAKNTL 346
Query: 265 GKISTKTTVIVEGPP 279
G I +V V+ P
Sbjct: 347 GAIHHTISVTVKAAP 361
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + +N N I K
Sbjct: 849 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP ++TP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|350588946|ref|XP_003482750.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Sus scrofa]
Length = 1192
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 209/495 (42%), Gaps = 55/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER ++Y
Sbjct: 358 DGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFV 122
QC A N+ ++A + VL P + T + F C +P P
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIE 468
Query: 123 WKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 469 WFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KD 525
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NINI 238
P+ + P + + C + L + W D +EL + +
Sbjct: 526 PTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTV 577
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVV 288
D L + + + D G Y CV +T+ +S + V P P P +++
Sbjct: 578 DKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELT 637
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEAS 346
+ S + WT G N PIT + I + W + +E V G + +
Sbjct: 638 DQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------T 687
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+
Sbjct: 688 AQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y VKV
Sbjct: 748 WKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKV 802
Query: 466 QAINDVGPGPESEVV 480
QA+NDVG PE VV
Sbjct: 803 QALNDVGFAPEPAVV 817
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 269 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIIQVTEADSGNYQ 320
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 321 CIAKNTLGAIHHTISVTV-KAAPYWIIAPQNLVLSPGEDG--TLICRANGNPKPRISWLS 377
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 378 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAE--- 433
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A LD A+ + G + + E
Sbjct: 434 ----PPRILTSA--NTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALR----EDIY 483
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I + G LEI A G Y CV ++ +G + + ++ P
Sbjct: 484 ILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMK---TGSGTLTINIMSDGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRS-GQSLVLPCRPPMGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V + E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVTSAKPHRERPPTFLTPEGNASRKEELRGNVLSLECIA--EGLPTPIIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + +N N L+I + AD+G Y+C+ K+T+G I +V V+ P
Sbjct: 290 -GTLPINRTFYRNFK---KTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKAAP 342
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + +N N I K
Sbjct: 830 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP ++TP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|426227607|ref|XP_004007909.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Ovis aries]
Length = 1192
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 206/497 (41%), Gaps = 55/497 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D T C A G P SW NG + E P +D R D ++ + ER A+
Sbjct: 356 EEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAV 410
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPK 120
YQC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 411 YQCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPA 466
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD GS R I+ ENG L I +D +G Y+C A N GM ++ L +
Sbjct: 467 IEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI- 523
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NI 236
P+ + P + + C + L W D EL +
Sbjct: 524 KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------DHGELPSDGRF 575
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQ 286
+D L + + + D G Y CV +T+ +S + V P P P ++
Sbjct: 576 TVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKE 344
+ + S + WT G N PIT + I + W + +E V G +
Sbjct: 636 LTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGTQT-------- 686
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L
Sbjct: 687 -TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLV 745
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +
Sbjct: 746 ITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLI 800
Query: 464 KVQAINDVGPGPESEVV 480
KVQA+ND G PE V
Sbjct: 801 KVQALNDAGFAPEPAAV 817
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 121/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S+ ++ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIA--EGLPTPIIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + +N N L+I + AD+G Y+C+ K+++G I +V V+ P
Sbjct: 290 -GTLPINRTFYRNFK---KTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKAAP 342
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V V V+ T A + W G G I ++K + N I K
Sbjct: 830 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ WEP
Sbjct: 941 IVNPTLDSLTLEWEP 955
>gi|350588952|ref|XP_003482753.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Sus scrofa]
Length = 1180
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 209/495 (42%), Gaps = 55/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER ++Y
Sbjct: 358 DGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVY 411
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFV 122
QC A N+ ++A + VL P + T + F C +P P
Sbjct: 412 QCNASNEYGYLLANAFVNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIE 468
Query: 123 WKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 469 WFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KD 525
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NINI 238
P+ + P + + C + L + W D +EL + +
Sbjct: 526 PTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTV 577
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVV 288
D L + + + D G Y CV +T+ +S + V P P P +++
Sbjct: 578 DKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELT 637
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEAS 346
+ S + WT G N PIT + I + W + +E V G + +
Sbjct: 638 DQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------T 687
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+
Sbjct: 688 AQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y VKV
Sbjct: 748 WKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKV 802
Query: 466 QAINDVGPGPESEVV 480
QA+NDVG PE VV
Sbjct: 803 QALNDVGFAPEPAVV 817
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 269 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIIQVTEADSGNYQ 320
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 321 CIAKNTLGAIHHTISVTV-KAAPYWIIAPQNLVLSPGEDG--TLICRANGNPKPRISWLS 377
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 378 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAE--- 433
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A LD A+ + G + + E
Sbjct: 434 ----PPRILTSA--NTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALR----EDIY 483
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I + G LEI A G Y CV ++ +G + + ++ P
Sbjct: 484 ILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 526
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMK---TGSGTLTINIMSDGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRS-GQSLVLPCRPPMGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V + E+ P +T + + L L C A E L W
Sbjct: 234 ISVKVTSAKPHRERPPTFLTPEGNASRKEELRGNVLSLECIA--EGLPTPIIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + +N N L+I + AD+G Y+C+ K+T+G I +V V+ P
Sbjct: 290 -GTLPINRTFYRNFK---KTLQIIQVTEADSGNYQCIAKNTLGAIHHTISVTVKAAP 342
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + +N N I K
Sbjct: 830 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP ++TP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 941 IVNPTLDSLTLEWDP 955
>gi|426227601|ref|XP_004007906.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Ovis aries]
Length = 1180
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 206/497 (41%), Gaps = 55/497 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D T C A G P SW NG + E P +D R D ++ + ER A+
Sbjct: 356 EEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAV 410
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPK 120
YQC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 411 YQCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPA 466
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD GS R I+ ENG L I +D +G Y+C A N GM ++ L +
Sbjct: 467 IEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI- 523
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NI 236
P+ + P + + C + L W D EL +
Sbjct: 524 KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------DHGELPSDGRF 575
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQ 286
+D L + + + D G Y CV +T+ +S + V P P P ++
Sbjct: 576 TVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKE 344
+ + S + WT G N PIT + I + W + +E V G +
Sbjct: 636 LTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGTQT-------- 686
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L
Sbjct: 687 -TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLV 745
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +
Sbjct: 746 ITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLI 800
Query: 464 KVQAINDVGPGPESEVV 480
KVQA+ND G PE V
Sbjct: 801 KVQALNDAGFAPEPAAV 817
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 121/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S+ ++ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIA--EGLPTPIIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + +N N L+I + AD+G Y+C+ K+++G I +V V+ P
Sbjct: 290 -GTLPINRTFYRNFK---KTLQIVQVTEADSGNYQCIAKNSLGAIHHTISVTVKAAP 342
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V V V+ T A + W G G I ++K + N I K
Sbjct: 830 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ WEP
Sbjct: 941 IVNPTLDSLTLEWEP 955
>gi|426255462|ref|XP_004021367.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Ovis aries]
Length = 2344
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 199/477 (41%), Gaps = 31/477 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA GVP WF++ +N L++ + L +R L PE D ++QC A N
Sbjct: 386 CEAMGVPPPALRWFKDAVSINM----LQNPRYQVLAGGGLRVRQLRPE-DSGIFQCLASN 440
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ L V + P+F + P++ T +G + C AP+P VW + +I+
Sbjct: 441 AGGEVQTHTYLDVTNVAPAFTQLPVD--TTVTDGMTAVLRCEVSGAPRPAIVWSRGSHIL 498
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 499 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCHAANSEGSLNASATLTVWNRTSIVTP- 557
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + + L C A + + + Y+W + V I + + + DG LL I+
Sbjct: 558 PEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIAPSSSSRVV---VEKDGSLL-IS 613
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C V S G S + V P P + + H + + W
Sbjct: 614 QTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQNLVASLTPAHGHAVVLSWVRPFD 673
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y I+ + NS W V + E+ T R L P TY+F+V A
Sbjct: 674 GNSPVLYY-IVELSENNSPW-KVHLSDVSPEMTSVTVRG-------LTPARTYQFRVCAV 724
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 725 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHNGALRGYVL 784
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+R E+Q + + ++ + +T+YE++V A N G G S V
Sbjct: 785 RYRLAGLPGEYQQRNIS---SPEVSYCLVTELIVWTQYEIQVAAYNGAGLGVFSRAV 838
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 107/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P +++ +W RNG + S L R N + D
Sbjct: 287 SETTLECIASARPVQELSVTWKRNGMRVTSG---LHSFGRRLTISNPTS-------SDTG 336
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
MY C A + + + A L ++ P F P +S A NV I C P P
Sbjct: 337 MYVCEAALPGSTFEPARAKAFLSIIE-PPYFTVEP-KSRILAEVEENVDIVCEAMGVPPP 394
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R ++ G L + + +DSGI+ C A+N G ++ L V
Sbjct: 395 ALRWFKDAVSINMLQNPRYQVLAGGGLRVRQLRPEDSGIFQCLASNAGGEVQTHTYLDVT 454
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-----AYIWTHNGVRIGNMDLNELE 232
+ + QLP T+ LRC + ++I VRI L
Sbjct: 455 NVAPAFTQLPVDTTVTDGMTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFML---- 510
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C ++ G ++ T+ V
Sbjct: 511 -----LESGGLQIAPVFIQDAGNYTCHAANSEGSLNASATLTV 548
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 2084 AEGSPGSPRDVSVTK-STSELTLQWTEGRAGRTPTTGYVIEARPSDEGLW-----DMFAK 2137
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ + S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 2138 DIPQGATSYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 2189
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 189/511 (36%), Gaps = 83/511 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
CE G P W R +L S ++ + R+ ++ L I + + D Y C A
Sbjct: 479 CEVSGAPRPAIVWSRGSHILASGSVRI---PRFMLLESGGLQIAPVFIQ-DAGNYTCHAA 534
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKDG 127
N + +SA L V + S P + +G T+ C P+ ++VWKKD
Sbjct: 535 NSEGSLNASATLTVWN-RTSIVTPP--EDLVVIKGTTATLHCGATHDPRISLRYVWKKDN 591
Query: 128 NIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+I S R + ++G+LLIS D G Y+C + G D RL V+ P +
Sbjct: 592 VVIAPSSSSRVVVEKDGSLLISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQN 651
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
L +T AH H L V ++ V ++L+E +P ++
Sbjct: 652 LVASLT-PAH--------GHAVVLSWVRPFDGNSPVLYYIVELSENNSPWKVHLSDVSPE 702
Query: 242 LLEITNASFADAGEYE---CVVKST-VGKISTKTTVIV--EGPPGLPGGVQVVEVHKT-- 293
+ +T A Y+ C V G+ ST+T+ ++ E PP P +V +T
Sbjct: 703 MTSVTVRGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPK-NIVASGRTNQ 761
Query: 294 SATIQWT-------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
S +QW +GA G + Y++ + G+ R E S
Sbjct: 762 SIMVQWQPPPEPEHNGALRGY-VLRYRLAG--------------LPGEYQQRNISSPEVS 806
Query: 347 --IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ L+ W+ YE +V A N G G S +Y T P P + +
Sbjct: 807 YCLVTELIVWTQYEIQVAAYNGAGLGVFSRAVAEY-TLQGVPTAPPQNVQVEAVNSTTIQ 865
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------- 457
W P P++ N N YK+ + E + VV I +F+
Sbjct: 866 FLWNPPPQQFINGINQGYKLLAWPDDVPE------------AVTVVTIAPDFHGVHHGYI 913
Query: 458 -----YTEYEVKVQAINDVGPGPESEVVTIW 483
+T Y V G GP S IW
Sbjct: 914 TNLKKFTAYFTSVLCFTTPGDGPPSTPQLIW 944
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 264 VGKISTKTTVI--VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIAR 317
G S + VI ++ PP + P + V +TS ++W D NG P + R
Sbjct: 1233 AGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNP---ESVGYR 1289
Query: 318 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 377
W W V+ +V +E ++E L W+ Y ++ A N +G G P S +
Sbjct: 1290 VKW---WCPDLPSVVQTQVISDRLEREFTVEG-LEEWTEYALQMQAFNAIGAG-PWSAAV 1344
Query: 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQS 436
+ T P AP + + ++W +P + QN + YKI +R K+ D E +S
Sbjct: 1345 RGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDPEPRS 1404
Query: 437 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
++ GN + + + + YE++V A +G G
Sbjct: 1405 HVVR--GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNG 1439
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 23/221 (10%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
P +PG ++W G+ PI ++ + R W +
Sbjct: 1568 PSVPGQRXXXXXXXXXLWLRWVPGSDGASPIRYFTLQLRELPGGPWPGTRAFTQHRLAPG 1627
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
AS++ VL P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1628 LASSGRASLQ-VLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRSVSVTPR 1686
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKEYGNVGIAVV----- 450
+ I W+P E N Y+I++R+ + +S+TLK + +
Sbjct: 1687 TTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAELTGEGSF 1746
Query: 451 ----RIPSEF----------YYTEYEVKVQAINDVGPGPES 477
R PS Y YEV + A N +G GP S
Sbjct: 1747 LRKGRAPSCXPCPLTLADLKKYRRYEVVLTAYNVIGEGPAS 1787
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 32/216 (14%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVSEHVIGKE 335
PG P + + + SAT+Q+ G I+ + + + W + E
Sbjct: 1147 PGAPSNLVISNISPRSATLQFRPGYDGKTAISRWIVQGQVGAVGDEEEWVTLCEE----- 1201
Query: 336 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
+A + + L P++ Y F++ N +G G S S T P AP+ I
Sbjct: 1202 ----ENEPDAQMLEIPDLTPYTHYRFRMRQVNVVGAGPFSQSSRVIQTLQAPPDVAPTSI 1257
Query: 394 GGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVV 450
L + W PLP + N ++ Y++ +W + Q++ + +
Sbjct: 1258 TVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKWWCPDLPSVVQTQVISD--------- 1308
Query: 451 RIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
R+ EF +TEY +++QA N +G GP S V
Sbjct: 1309 RLEREFTVEGLEEWTEYALQMQAFNAIGAGPWSAAV 1344
>gi|426227605|ref|XP_004007908.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Ovis aries]
Length = 1256
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 206/497 (41%), Gaps = 55/497 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D T C A G P SW NG + E P +D R D ++ + ER A+
Sbjct: 369 EEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAV 423
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPK 120
YQC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 424 YQCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPA 479
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD GS R I+ ENG L I +D +G Y+C A N GM ++ L +
Sbjct: 480 IEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI- 536
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NI 236
P+ + P + + C + L W D EL +
Sbjct: 537 KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------DHGELPSDGRF 588
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQ 286
+D L + + + D G Y CV +T+ +S + V P P P ++
Sbjct: 589 TVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLE 648
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKE 344
+ + S + WT G N PIT + I + W + +E V G +
Sbjct: 649 LTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGTQT-------- 699
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L
Sbjct: 700 -TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLV 758
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +
Sbjct: 759 ITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLI 813
Query: 464 KVQAINDVGPGPESEVV 480
KVQA+ND G PE V
Sbjct: 814 KVQALNDAGFAPEPAAV 830
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 112/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 282 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIVQVTEADSGNYQ 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P E G T+ C PKP+ W
Sbjct: 334 CIAKNSLGAIHHTISVTV-KAAPYWIIAPQNLVLSPEEDG--TLICRANGNPKPRISWLS 390
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 391 NGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 446
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ W + G+ ++
Sbjct: 447 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPAIEWFKDAK--GSALREDIYVL 498
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ N G LEI A G Y CV ++ +G + ++ P
Sbjct: 499 HEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 539
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 117/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEPITLRN-GQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 168 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITIAAHRN----------LQLRCS 203
+DE + +G + Q PP L L C
Sbjct: 228 ISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECI 287
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + AD+G Y+C+ K++
Sbjct: 288 A--EGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQIVQVTEADSGNYQCIAKNS 339
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 340 LGAIHHTISVTVKAAP 355
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 55/135 (40%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V V V+ T A + W G G I ++K + N I K
Sbjct: 843 PGNVHVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 895
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 896 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 953
Query: 395 GGGGKIGDLSISWEP 409
+ L++ WEP
Sbjct: 954 IVNPTLDSLTLEWEP 968
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 337
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NSLGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 394
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|350588954|ref|XP_003130319.3| PREDICTED: neuronal cell adhesion molecule isoform 1 [Sus scrofa]
Length = 1304
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 209/495 (42%), Gaps = 55/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER ++Y
Sbjct: 377 DGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSSVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF--CNPEAAPKPKFV 122
QC A N+ ++A + VL P + T + F C +P P
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT---SANTLYQVIADRPAFLDCAFFGSPLPSIE 487
Query: 123 WKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W K GS R I+ ENG L I +D +G Y+C A N GM +++ L +
Sbjct: 488 WFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KD 544
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP-NINI 238
P+ + P + + C + L + W D +EL + +
Sbjct: 545 PTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------DHSELPSDGRFTV 596
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVV 288
D L + + + D G Y CV +T+ +S + V P P P +++
Sbjct: 597 DKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELT 656
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEAS 346
+ S + WT G N PIT + I + W + +E V G + +
Sbjct: 657 DQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------T 706
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+
Sbjct: 707 AQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVIT 766
Query: 407 WEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y VKV
Sbjct: 767 WKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKV 821
Query: 466 QAINDVGPGPESEVV 480
QA+NDVG PE VV
Sbjct: 822 QALNDVGFAPEPAVV 836
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 288 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIIQVTEADSGNYQ 339
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 340 CIAKNTLGAIHHTISVTV-KAAPYWIIAPQNLVLSPGEDG--TLICRANGNPKPRISWLS 396
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 397 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAE--- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A LD A+ + G + + E
Sbjct: 453 ----PPRILTSA--NTLYQVIADRPAFLDCAFFGSPLPSIEWFKGAKGSALR----EDIY 502
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I + G LEI A G Y CV ++ +G + + ++ P
Sbjct: 503 ILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 120/314 (38%), Gaps = 45/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMK---TGSGTLTINIMSDGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRSSRSPLWTKEKLEPMTLRS-GQSLVLPCRPPMGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTA------------- 161
P ++ D + ++ + NG+L S V +D+ Y C A
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDAREDYICYARFNHTQTIQQKQP 233
Query: 162 --TNVHGMDESKGRLIV------LHGPSYYEQLPPKITIA---AHRNLQLRCSAHTEELL 210
V +DE + +G + + PP A R +LR + + E +
Sbjct: 234 ISVKVTSVDELNDTIAANLSDTEFYGAKPHRERPPTFLTPEGNASRKEELRGNVLSLECI 293
Query: 211 DVAY-----IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
W G + +N N L+I + AD+G Y+C+ K+T+G
Sbjct: 294 AEGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQIIQVTEADSGNYQCIAKNTLG 347
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 348 AIHHTISVTVKAAP 361
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + +N N I K
Sbjct: 849 PGNVRVSVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSNRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP ++TP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRAFHTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
>gi|165993291|emb|CAP71957.1| nadl1.2 [Danio rerio]
Length = 1145
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 214/473 (45%), Gaps = 29/473 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G+P +W NG LL+ ++ R ++ VLT++ + D A++QC+A +
Sbjct: 368 CKADGIPKPEVTWSINGILLSD----IDPDPRRSVKHGVLTLKNVE-LSDTAVFQCKAAS 422
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAAPKPKFVWKKDG-N 128
+ + +A + V+ L P + Y+ EG + C +P+P W+ +
Sbjct: 423 KHGSVLINAYVYVIELPPQILTE--DGLMYSVAEGQTTELACETFGSPRPNVTWEGESWG 480
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ + R +G+L IS S +DSG Y+CT N L VL+ + + P
Sbjct: 481 ALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNN--SKITITAELDVLNK-TVIVKPPL 537
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ I + L C + D+ + W N ++ ++ ID L I
Sbjct: 538 ALRIQRGKPATLTCEYQVDSRQDLPQVQWRKNTQKLTESS----DSDKYMIDESTLIIPE 593
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
D G Y C V +T+ ++ + P P +Q+ E + T+ WT GA +
Sbjct: 594 VEEEDEGTYTCEVITTLDMAKASGSITIVDRPDPPSLIQMTEPKERRVTLSWTPGADHNS 653
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
P+ Y I + T + E +E+ R +G + + L P+ +Y F+VIA NE+
Sbjct: 654 PVLEYLI----EFEETGSDRKEW---EELSRVSGSSQRATLP-LKPFISYHFRVIAINEI 705
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G +PS + Y+TPA P P + + G L I+W+ + R N P+ +YK+ WR
Sbjct: 706 GKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRSFNGPDFHYKVMWR 765
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
K + T K+ + V + + ++ +++KVQA+N++G GPE + +
Sbjct: 766 KVLGSGPSWHT-KDITSPPFVVTDVGN---FSAFDIKVQAVNEMGEGPEPKSI 814
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 11/255 (4%)
Query: 31 NSETLPLEDQDRYFIQDNVLTIR--YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKP 88
N + D + YF V R Y + P+ + K +K SS+ V +P
Sbjct: 195 NERVIQGRDGNLYFSHATVADSRDDYTCNIQFPSARVIKLKEPIKLTVSSSNSVVRNRRP 254
Query: 89 SFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147
+ S +Y G N+ + C + P P W + ++ K + L
Sbjct: 255 QMMRPTGPSSSYLVLSGQNLELECIVQGLPSPSIQWIRKDGVLSESRTTKDSNDRVLRFQ 314
Query: 148 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 207
+S D G Y CTATN GM R+ V P Y+ + P A ++L C A
Sbjct: 315 NISETDGGEYQCTATNPQGMSTHTYRVTVEAAP-YWIKEPKSQLYAPGETVKLECKADGI 373
Query: 208 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267
+V W+ NG+ + ++D + P ++ G+L + N +D ++C S G +
Sbjct: 374 PKPEVT--WSINGILLSDIDPD----PRRSVKHGVLTLKNVELSDTAVFQCKAASKHGSV 427
Query: 268 STKTTV-IVEGPPGL 281
V ++E PP +
Sbjct: 428 LINAYVYVIELPPQI 442
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 40/297 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNPERDPA 62
D+T TC+A G P T+ W ++G E P +D D +D+ LT + +
Sbjct: 68 DITLTCDATGNPPPTFRWVKDG----VEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQG 123
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKF 121
Y C A N+L T S+ V P+ +K + ++ EG +V + CN P P
Sbjct: 124 RYNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVE-EGESVVLPCNPPNGTVAPVI 182
Query: 122 VW-KKDGNIIGSGGRRKIFENGNLLISPV----SRDDSGIYSCT----ATNVHGMDESKG 172
W K I R +GNL S SRDD Y+C + V + E
Sbjct: 183 HWMDKKLRHIQQNERVIQGRDGNLYFSHATVADSRDD---YTCNIQFPSARVIKLKEPI- 238
Query: 173 RLIVLHGPSYYEQLPPKIT----------IAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
+L V S P++ + + +NL+L C + +I +GV
Sbjct: 239 KLTVSSSNSVVRNRRPQMMRPTGPSSSYLVLSGQNLELECIVQGLPSPSIQWI-RKDGV- 296
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
L+E T + D +L N S D GEY+C + G + V VE P
Sbjct: 297 -----LSESRTTKDSND-RVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAP 347
>gi|297490638|ref|XP_002698210.1| PREDICTED: protein sidekick-1 [Bos taurus]
gi|296473045|tpg|DAA15160.1| TPA: sidekick homolog 1, cell adhesion molecule (chicken) [Bos
taurus]
Length = 2194
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 202/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA GVP WF++ +N L++ + L +R L PE D ++QC A N
Sbjct: 314 CEAMGVPPPALQWFKDAISINK----LQNPRYQVLAGGGLRVRQLRPE-DSGIFQCLASN 368
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ L V + P+F + P+++ G + C AP+P VW + +I+
Sbjct: 369 AGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGT--TAVLRCEVSGAPRPAIVWSRGSHIL 426
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PVS D+G Y+C A N G ++ L V + S
Sbjct: 427 ASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLTVWNRTSIVTP- 485
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + + L C A + + + Y+W + V I + + + DG LL I+
Sbjct: 486 PEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIAPSSSSRVV---VEKDGSLL-IS 541
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C V S G S + V P P + + H + + W
Sbjct: 542 QTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQNLVASLNPAHSHAVVLSWVRPFD 601
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y I+ + NS W V +G E+ T R L P TY+F+V A
Sbjct: 602 GNSPVLYY-IVELSENNSPW-KVHLSDVGPEMTGVTVRG-------LTPARTYQFRVCAV 652
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 653 NQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHNGVLRGYIL 712
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + ++ + +T+YE++V A N G G S VT
Sbjct: 713 RYRLAGLPGEYQQRNIS---SPEVSYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVT 767
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 107/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P +++ +W RNG + T L R N + D
Sbjct: 215 SETTLECIANARPAEELSVTWKRNGVRV---TTGLHGFGRRLTISNPTS-------SDTG 264
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A + + + A L ++ P F P +S A NV I C P P
Sbjct: 265 VYICEAALPGSAFEPARARAFLSIIE-PPYFIAEP-KSRILAEVEENVDIVCEAMGVPPP 322
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R ++ G L + + +DSGI+ C A+N G ++ L V
Sbjct: 323 ALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPEDSGIFQCLASNAGGEVQTHTYLDVT 382
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-----AYIWTHNGVRIGNMDLNELE 232
+ + QLP T+ LRC + ++I VRI L
Sbjct: 383 NVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFML---- 438
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I S DAG Y C ++ G + T+ V
Sbjct: 439 -----LESGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLTV 476
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+ WT+G P T Y I AR + W + K
Sbjct: 1805 AEGSPGSPRDVSVTK-STSELTLHWTEGRAGRTPTTGYVIEARPSDEGLW-----DMFAK 1858
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1859 DIPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 1910
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G G S+P + A P QAP R+ L ++WEP P E QN
Sbjct: 1579 YEVVLTAYNVIGEGPASAPVEVFVGEA-APAQAPQRVHVNPLTASQLEVAWEPPPPESQN 1637
Query: 417 APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
YKI++ +NDTE F ET + N+ +T+Y V + A
Sbjct: 1638 GIIQGYKIYYWEADSQNDTEKMRVLFLPETTAKLKNLT----------SHTKYLVSISAF 1687
Query: 469 NDVGPGPESE 478
N G GP SE
Sbjct: 1688 NAAGDGPRSE 1697
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 39/231 (16%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 963 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTAISRWIVQGQVG------ 1016
Query: 326 NVSEHVIGKEVDRYTGRKEASIENV-------LVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
IG E + T +E + + L P++ Y F++ N +G G S S
Sbjct: 1017 -----AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRV 1071
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 435
T P AP+ I L + W PLP + N ++ Y+I +W +
Sbjct: 1072 IQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVL 1131
Query: 436 SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
++ + + R+ EF +TEYE+++QA N +G GP S V
Sbjct: 1132 TQVISD---------RLEREFTVEGLEEWTEYELQMQAFNAIGAGPWSAAV 1173
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 61/277 (22%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 28 LVLTCLAEGSWPLEFKWTHN----DSELTTYTSEYKYVIP----SLQRL----DAGFYRC 75
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKF 121
+N+ L R S Q+ + +R + SE G + P + P+P+
Sbjct: 76 VVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSE------GRAAVLSLPPISSCPRPQV 129
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN-----------VH----- 165
W +DG+ I R I L+I + D+G Y A N VH
Sbjct: 130 TWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPPVHLSIAR 189
Query: 166 --GMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
GM E+ +IV +PP + +A L C A+ +++ W NGV
Sbjct: 190 DTGMPEAVAPVIV---------VPPSNRSVVAGSSETTLECIANARPAEELSVTWKRNGV 240
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
R+ T ++ G L I+N + +D G Y C
Sbjct: 241 RV---------TTGLHGFGRRLTISNPTSSDTGVYIC 268
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 38/231 (16%)
Query: 279 PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 332
P P +QV +V S ++W G+ PI ++ + + R W + ++S
Sbjct: 1383 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1442
Query: 333 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 392
V+R L P+++Y+ ++ A N++G + S+ + T D P + P
Sbjct: 1443 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1490
Query: 393 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 440
+ + I W+P E N Y+I++R+ + +S+TLK
Sbjct: 1491 VSVTPRTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1550
Query: 441 ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
+ V + E Y YEV + A N +G GP S V ++
Sbjct: 1551 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVF 1601
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 264 VGKISTKTTVI--VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIA 316
G S + VI ++ PP + P + V +TS ++W D NG P + Y+I
Sbjct: 1062 AGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI-- 1119
Query: 317 RTNWNSTWFN-VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 375
W + V VI ++R E ++E L W+ YE ++ A N +G G P S
Sbjct: 1120 -KYWCPDLPSAVLTQVISDRLER-----EFTVEG-LEEWTEYELQMQAFNAIGAG-PWSA 1171
Query: 376 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEF 434
+ + T P AP + + ++W +P QN + YKI +R K+ D E
Sbjct: 1172 AVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEP 1231
Query: 435 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
+S ++ GN + + + + YE++V A +G G
Sbjct: 1232 RSHVVR--GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNG 1268
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1284 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1341
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR---IG 394
++T + L P S Y F++ A G+GEP + ++P AP R +
Sbjct: 1342 QFTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP--APPRELQVP 1392
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
L + W +P +P Y+ + R+ ++Q+ + VV
Sbjct: 1393 QADVTARSLCLRW--VPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEATACVVERLR 1450
Query: 455 EFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
F T Y+++++A ND+G E+E VT D
Sbjct: 1451 PF--TSYKLRLKATNDIGDSDFSAETEAVTTLQD 1482
>gi|449280044|gb|EMC87436.1| Neurofascin [Columba livia]
Length = 1372
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 213/489 (43%), Gaps = 54/489 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAK 69
C A G P W NGE + + + R D TI + + + A+YQC A
Sbjct: 376 CRANGNPKPAIQWLVNGEPIEASP---PNPSREVAGD---TIVFRDTQIGSSAVYQCNAS 429
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-- 127
N+ ++A + VL + P P + + C +P P W K+G
Sbjct: 430 NEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNGQG 488
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
N + GG K ENG+L ++ ++D GIY+C ATN+ G E++ RL V P+ + P
Sbjct: 489 NTL-DGGNYKAHENGSLEMNMARKEDQGIYTCVATNILGKAEAQVRLEV-KDPTRIVRGP 546
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEI 245
+ +L C + L + W + + IGN E D GL I
Sbjct: 547 EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDEAPLYIGNRMKKE--------DDGLT-I 597
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIV---------EGP---PGLPGGVQVVEVHKT 293
+ D G+Y CV + + K K + V E P P P +++ ++ +
Sbjct: 598 FGVAEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRSRELPKERPDRPRDLELTDLAER 657
Query: 294 SATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
S + W G N PIT Y + + W N S RY G +++ + L
Sbjct: 658 SVRLTWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHS---------RYPGSVNSAVLS-L 707
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+W PL
Sbjct: 708 SPYVNYQFRVIAVNDVGSSLPSVPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLN 767
Query: 412 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ PN+ Y + WR+++ + +ET+K +V V P Y YE+KVQA ND
Sbjct: 768 ATQAYGPNLRYIVRWRRRDIRGSWYNETVKTARHV---VWNTP---IYVPYEIKVQAEND 821
Query: 471 VGPGPESEV 479
G PE +
Sbjct: 822 FGRAPEPDT 830
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 119/316 (37%), Gaps = 51/316 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + D+ CEA G P T+SW RNG+ N P R + L I + + P
Sbjct: 54 VDPRDDIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHSGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 EDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P P W I R +NG+L S V D+ YSC A
Sbjct: 170 PSPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 162 ----------------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS 203
N GM ++G I PS+ + R +L L C
Sbjct: 230 YTLKVKTKKPHNETSLRNHTGMYSARG--ITETTPSFMYPYGTSSSQMVLRGVDLLLECI 287
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A D+ +W G G + + + N N L I+N S D+GEY C+ +
Sbjct: 288 ASGVPAPDI--MWYKKG---GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNK 339
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 340 MGSIRHTISVRVKAAP 355
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 108/286 (37%), Gaps = 40/286 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L + LE+ ++ NV E D Y
Sbjct: 281 DLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNV-------SEEDSGEYF 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 334 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPAIQWLV 390
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I + E I V RD S +Y C A+N HG + + VL
Sbjct: 391 NGEPIEASPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 444
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+ I A RN ++ + LD + W NG N L+
Sbjct: 445 ---DVPPR--ILAPRNQLIKVIQNNRTRLDCPFFGSPIPTLRWFKNG------QGNTLDG 493
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
N + G LE+ A D G Y CV + +GK + + V+ P
Sbjct: 494 GNYKAHENGSLEMNMARKEDQGIYTCVATNILGKAEAQVRLEVKDP 539
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ A W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNP--KPAIQWLVNGEPI 395
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 396 EASPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 450
>gi|327272948|ref|XP_003221246.1| PREDICTED: neuronal cell adhesion molecule-like [Anolis
carolinensis]
Length = 1270
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 202/489 (41%), Gaps = 43/489 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D + C A G P + SW NG + + ED R D ++ ER A+YQ
Sbjct: 356 DGSLICRANGKPKPSISWLANGVPI---AIAPEDPSRKVDGDTIIFTDVQ--ERSSAVYQ 410
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL P PL + + C +P P+ W K
Sbjct: 411 CNASNEYGYLLANAFVNVLAEPPRILT-PLNTLYQVIANKPALLDCAFFGSPVPEIEWFK 469
Query: 126 --DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G+I+ G + +NG L I ++ G Y+C A N G ++ +L + P+
Sbjct: 470 GVKGSIL-QGNQYIFHKNGTLEIPVAKKNSGGTYTCVARNKLGKVQNDVQLQIKE-PTVI 527
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ P + + C + L W + N + + L
Sbjct: 528 IKEPEYKVVQRTGQVSFECIIKHDTTLIPTVTWLKENNELPNDE-------RFMVGKNNL 580
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV----------QVVEVHKT 293
I N + D G Y C+ +T+ +S + V PP P V ++ + +
Sbjct: 581 TIMNVTDKDGGAYTCIANTTLDSVSASAVLTVVAPPTAPPVVYDRPDPPFDLELTDHLER 640
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLV 352
S + W G N PIT + I +N V G + T K L
Sbjct: 641 SVQLTWIPGNDNNSPITKFIIEYEDAMREPGIWNYQTEVNG--ILTTTQLK-------LS 691
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+VIA N++G +PS S QY T A KP P+ + G G + +L I WEPL +
Sbjct: 692 PYVNYSFRVIAINDIGRSQPSEASEQYFTKAAKPDDNPTDVQGIGSEPDNLVIMWEPLKQ 751
Query: 413 EKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ N P + YK+ WR+K+ D E+ S + NV +V F T YE+KVQ +ND+
Sbjct: 752 FQSNGPGLQYKVSWRQKDGDDEWTSVIV---ANVSRYIVSGTPTF--TPYEIKVQGLNDL 806
Query: 472 GPGPESEVV 480
GP PE V
Sbjct: 807 GPAPEPTTV 815
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G+P T W + G LP+ +R F ++ T++ + E D Y+
Sbjct: 267 LLLECIAEGLPTPTIRWIKEGG-----ELPV---NRKFFENFNKTLKITDISEADSGKYK 318
Query: 66 CRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
C A N L S+ + +T+K P + + P GE G ++ C PKP W
Sbjct: 319 CMASNLLG---SAHHVITVTIKAAPYWIREPTNLVFSPGEDG--SLICRANGKPKPSISW 373
Query: 124 KKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
+G I RK+ + ++ + V S +Y C A+N +G + + VL
Sbjct: 374 LANGVPIAIAPEDPSRKV-DGDTIIFTDVQERSSAVYQCNASNEYGYLLANAFVNVLAE- 431
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELET 233
PP+I N + A+ LLD A+ + GV+ + N+
Sbjct: 432 ------PPRILTPL--NTLYQVIANKPALLDCAFFGSPVPEIEWFKGVKGSILQGNQY-- 481
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I G LEI A G Y CV ++ +GK+ + ++ P
Sbjct: 482 --IFHKNGTLEIPVAKKNSGGTYTCVARNKLGKVQNDVQLQIKEP 524
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 120/300 (40%), Gaps = 33/300 (11%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + + + R L I +N E
Sbjct: 53 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDK---DARVRMKPHSGTLIINIINEENG 109
Query: 61 ------PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE 114
+YQC A+N+L S+ + + P + K L + EG V + C P
Sbjct: 110 GKAESYEGVYQCTARNELGAAISNNIVIRSSRSPLWTKEKLVPKVVT-EGQYVVLPCRPP 168
Query: 115 AAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESK 171
P ++ D + ++ + NG+L S V +D+ Y C A H +
Sbjct: 169 VGLPPPIIFWMDNSFQKLPQNERVSQSLNGDLYFSNVIPEDTREDYICYARFNHTQTIQQ 228
Query: 172 GRLIVLH---GPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHN 219
+ I L Y E+ P +T + L L C A E L W
Sbjct: 229 KQPISLKVEPARLYQERRPTILTPGGSTSTKTELRGNTLLLECIA--EGLPTPTIRWIKE 286
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G G + +N N N L+IT+ S AD+G+Y+C+ + +G TV ++ P
Sbjct: 287 G---GELPVNRKFFENFN---KTLKITDISEADSGKYKCMASNLLGSAHHVITVTIKAAP 340
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG +QV V+ T A +QW G G I ++K+ + + + +H I K
Sbjct: 828 PGNLQVQVVNSTLAKVQWDPVAQKYIRGHLQGYKIYYWKVKSLSG------RIKKH-IEK 880
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
+ ++G K + L P+S+Y+ V N G G P SP + TP P APS +
Sbjct: 881 KTLTFSGNKTHGMVPGLEPYSSYKLNVRVLNGKGEG-PPSPDEAFKTPEGVP-SAPSFLK 938
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W P
Sbjct: 939 ITNPNLDSLTLEWGP 953
>gi|393905222|gb|EJD73902.1| immunoglobulin I-set domain-containing protein [Loa loa]
Length = 1181
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 208/474 (43%), Gaps = 35/474 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPERDPAMYQCRA 68
C G+P WF NG L+ L D DR I +N +L I L+ + D A+YQC A
Sbjct: 351 CVTSGIPTPIVQWFINGVPLHE----LADNDRRMILNNGQILRIVNLDHDIDTAVYQCNA 406
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW--KKD 126
N + +A + V P FK P V + C+ +AAP+ W D
Sbjct: 407 SNPFGYVFGNAFVNVRAYAPYFKM-PSHRVWNVVRKSTVEMSCDVDAAPEAVVKWVDAND 465
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ G+ IF N L +S V+ D G+Y C +N +G++ + RL V P+++ ++
Sbjct: 466 HPLAVVLGKIHIFRNHTLRLSQVNSADEGLYYCNVSNKYGINRAVNRLQVF-SPTHFIRV 524
Query: 187 PP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P K+ + AH +++ C A + L + Y WT NG+ I + + ++N L
Sbjct: 525 PSPKKLILEAHESVEYICEAVCDPRLTIEYSWTRNGIPIN----DSVHFKSLN---NSLL 577
Query: 245 ITNASFADAGEYECVVKSTVG-KISTKTTVIVEGP--PGLPGGVQVVEVHKTSATIQWTD 301
I +A +G +C+ + V KIS +++ P P + G + ++ A + W
Sbjct: 578 IVDARGIHSGVIDCIALTNVDVKISGVELTVLDVPDAPIVTG----INCNERRAMLSWRR 633
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
+G I + + T + + + V+ KE T ++ L PW Y F+V
Sbjct: 634 PVDHGDQIKQFLVQMHTEFEE---GLWQTVVEKE---NTAADFYQVDIALSPWVNYTFRV 687
Query: 362 IAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
IA N G EP +T A P+ P + G + ++ I W+P+ + N P +
Sbjct: 688 IARNSRGESEPGFKEGIVCSTKAYYPFTNPKDVRAEGSEPSNIIIEWKPMNKYDWNGPGL 747
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
Y + +R E +E E VVR F EY V+V+++N GP
Sbjct: 748 QYIVRYRLNEPGETWTEIRIEDPLANHTVVREQPTF--REYLVQVESLNSFGPA 799
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 129/335 (38%), Gaps = 52/335 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P+ TY WF+NG+ L + + + ++ Q + I + D YQC A N
Sbjct: 52 CYATGNPE-TYEWFKNGKRLEVDNNRIVWEKQF--QSGTIIINDAQ-DGDQGYYQCHASN 107
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW----KK 125
T S+ + + F R + EGG+++I C+ P PKP W +
Sbjct: 108 IFGTAVSNKFHVQIGVLDHFAPRGVR-RLIVDEGGSLSIRCDIPFGVPKPSVFWLYRDAQ 166
Query: 126 DGNIIGSGGRRKIFEN--GNLLISPVSRDDSG---IYSCTATN----------------V 164
N++ + R+ I + G L + V + D IY C AT+ V
Sbjct: 167 RTNVMETIRRKHIAVDTEGTLHFTAVEKHDGRQNLIYQCAATSPVLRGEYRAGNEFQLIV 226
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+S G V+H + P ++++ L+L C L ++ W+ +
Sbjct: 227 DSAKKSNG--TVIHKLWFS---PEEVSVKVGTKLKLMCIFGGRPLPNIT--WSKLNGELP 279
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI---------- 274
L + ++ + G L I N DAG YEC + ++ T
Sbjct: 280 FTRLKDFKSQEADF-GKALIIENVRAEDAGIYECRSQHLFHQMHVTTAAAPFWIDKPPQD 338
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 309
++ P G G + V + +QW NG P+
Sbjct: 339 IDEPEGNAGEIHCVTSGIPTPIVQW---FINGVPL 370
>gi|226955344|gb|ACO95339.1| L1 cell adhesion molecule isoform 2 precursor (predicted) [Dasypus
novemcinctus]
Length = 1039
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 203/481 (42%), Gaps = 42/481 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P SW NG + L ++ IQ L + + P D + QC A+N
Sbjct: 140 CQAQGRPQPEVSWRINGIPVTE----LTSDQKFRIQRGSLILSNVQPA-DTMVTQCEARN 194
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDGNI 129
+ ++A + V+ L P+ P EG + C AP P W + G
Sbjct: 195 RHGLLLANAYIYVVQL-PTKILTPDNQTYMVVEGSTAHLLCKAFGAPVPSVQWLNEKGET 253
Query: 130 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
+ R NG L I + +D+G Y C ATN + + ++ + + Q P +
Sbjct: 254 VLQDERFFPHANGTLGIRELQANDTGRYFCQATNDQN-NVTIMAVLQVKDATQITQGPQR 312
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNA 248
N+ C A + L + W NG DL EL ++ I+ G L I +
Sbjct: 313 AVKKKGSNVTFTCQASFDPSLQHSITWRANG-----HDLQELGDSDKYFIEDGRLVINSL 367
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATN 305
++D G Y CV + + + ++ ++V G PG +++ + H ++ + W +
Sbjct: 368 DYSDQGNYSCVAGTQLDVVESRAELLVVGSPGPVPQLELSDHHLLEQSQVRLSWRPAEDH 427
Query: 306 GRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
PI Y I +AR W H +G T A+++ L P+ Y F
Sbjct: 428 NAPIEKYNIEFEDKEMARGKW---------HSLGNVPGNQT---SATLK--LSPYVHYTF 473
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP
Sbjct: 474 RVTAINKCGPGEPSLTSETVVTPEAAPEKNPKDVKGEGNETHNMVITWQPLGWMDWNAPQ 533
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
+ Y++ WR++ E + V + + + + YE+KVQA+N G GPE V
Sbjct: 534 VQYRVQWRRQGARGTWQEQI-----VSDPPLVVANTSTFVPYEIKVQAVNSQGKGPEPHV 588
Query: 480 V 480
Sbjct: 589 T 589
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 175/458 (38%), Gaps = 63/458 (13%)
Query: 41 DRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 99
DR Q++ T++ +N E D Y+C A+N L T + + V P + +P ES
Sbjct: 72 DRVTYQNHNKTLQLVNVGEEDDGEYRCLAENSLGTTQHTYYITV-EAAPYWLHQP-ESHL 129
Query: 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIY 157
Y G G + C + P+P+ W+ +G + + F + G+L++S V D+ +
Sbjct: 130 Y-GPGETARLDCQAQGRPQPEVSWRINGIPVTELTSDQKFRIQRGSLILSNVQPADTMVT 188
Query: 158 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEEL 209
C A N HG L++ + Y QLP KI + L C A +
Sbjct: 189 QCEARNRHG-------LLLANAYIYVVQLPTKILTPDNQTYMVVEGSTAHLLCKAFGAPV 241
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
V ++ G + +E P+ N G L I D G Y C + ++
Sbjct: 242 PSVQWL-NEKGETVLQ---DERFFPHAN---GTLGIRELQANDTGRYFCQATNDQNNVTI 294
Query: 270 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 329
+ V+ + G Q V K + + +T A+ + H W + ++ E
Sbjct: 295 MAVLQVKDATQITQGPQRA-VKKKGSNVTFTCQASFDPSLQH-----SITWRANGHDLQE 348
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS---------PSPQYN 380
+G + D+Y + N L + +AG +L E + P PQ
Sbjct: 349 --LG-DSDKYFIEDGRLVINSLDYSDQGNYSCVAGTQLDVVESRAELLVVGSPGPVPQLE 405
Query: 381 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 440
+D S++ +SW P E NAP Y I + K + +L
Sbjct: 406 L-SDHHLLEQSQV----------RLSWRPA--EDHNAPIEKYNIEFEDKEMARGKWHSLG 452
Query: 441 EY-GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
GN A +++ Y Y +V AIN GPG S
Sbjct: 453 NVPGNQTSATLKLSP---YVHYTFRVTAINKCGPGEPS 487
>gi|170589239|ref|XP_001899381.1| Immunoglobulin I-set domain containing protein [Brugia malayi]
gi|158593594|gb|EDP32189.1| Immunoglobulin I-set domain containing protein [Brugia malayi]
Length = 1171
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 208/473 (43%), Gaps = 37/473 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPERDPAMYQCRA 68
C G+P WF NG L+ L D DR I ++ +L I L+ + D A+YQC A
Sbjct: 351 CTISGIPTPIIQWFINGVPLHE----LADNDRRMILNSGQILRIVNLDHDVDTAVYQCNA 406
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW--KKD 126
N + +A + V P FK P V + C+ EAAPK W D
Sbjct: 407 SNPFGYVFGNAFVNVRAYAPYFKM-PSHRIWNVVRKSTVEMSCDVEAAPKAVVKWVDTND 465
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+I + IF N L IS V+ D G+Y C +N +G++ + +L V + P+++ ++
Sbjct: 466 HSIAVVLEKINIFPNHTLRISQVNSADEGLYYCNVSNKYGINRAVNQLQVFN-PTHFIRV 524
Query: 187 P-PKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P PK +I AH +++ C A + L + Y WTHNG+ I ++ + + L
Sbjct: 525 PSPKKSILEAHESVEYVCEAVCDPRLTIEYSWTHNGIPIN-------DSVHFKLLNNSLL 577
Query: 245 ITNASFADAGEYECVVKSTVG-KISTKTTVIVEGP--PGLPGGVQVVEVHKTSATIQWTD 301
I NA +G +C+V + V KIS +++ P P + G + ++ A ++W
Sbjct: 578 IVNARGFHSGTIDCIVLTDVDVKISGIELTVLDVPAAPIITG----INCNERRAMLRWRR 633
Query: 302 GATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
+G I + I T + W V E + T + L PW Y F+
Sbjct: 634 PDDHGDQIKQFLIQMHTEFEEGLWQTVVE-------EENTAADFYQADIALSPWVNYTFR 686
Query: 361 VIAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+IA N G EP +T A P+ P + G + ++ I W+P+ + N P
Sbjct: 687 IIARNSRGESEPGFKEGIVCSTKAYYPFTNPKDVRAEGSEPNNMIIEWKPMDKYDWNGPG 746
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ Y + ++ E +E E V+R F EY ++V+++N G
Sbjct: 747 LQYIVRYKFNKPGEAWTEIRIEDPLANYTVIREQPTF--REYLIQVESLNSFG 797
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 128/336 (38%), Gaps = 54/336 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELL--NSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMYQC 66
C A G P+ TY WF++GE L + + + E Q Q + I N R D YQC
Sbjct: 52 CYATGNPE-TYEWFKDGEKLKVDGDRIAWEKQ----FQSGTIII---NDARDGDQGYYQC 103
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW-- 123
A N S+ + + F R + EG +++I C+ P PKP W
Sbjct: 104 HASNIFGIAVSNKFHVQIGVLDHFVPRGVR-RLIVDEGQSLSIRCDIPYGVPKPSVFWLY 162
Query: 124 --KKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSG---IYSCTATN--VHGMDESKGRL 174
+ N+I + + I + G L + V + D IY C T+ + G +
Sbjct: 163 RDTQRTNMIETIRYKHIAVDTEGTLHFTAVKKHDGRQNLIYQCAVTSPVLRGEYRAGNEF 222
Query: 175 IVLHGPSYYEQ---------LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
++ P+ P K+++ L+L C L ++ + ++ + +
Sbjct: 223 QLIVNPAKKNNGTAIHKLWFSPEKVSVKVGTKLKLMCIFGGRPLPNITWSKLNDDLPLAR 282
Query: 226 M-DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI---VEGPP-- 279
+ D E G L I N DAG YEC + ++ T ++ PP
Sbjct: 283 LKDFKSQEADY----GKALIIENVRSEDAGIYECRSQHLFHQMHVTTNAAPFWIDKPPED 338
Query: 280 -GLPGGVQVVEVHKT-----SATIQWTDGATNGRPI 309
P G E+H T + IQW NG P+
Sbjct: 339 IDEPEG-SSAEIHCTISGIPTPIIQW---FINGVPL 370
>gi|358419039|ref|XP_003584107.1| PREDICTED: protein sidekick-1 [Bos taurus]
Length = 2114
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 202/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA GVP WF++ +N L++ + L +R L PE D ++QC A N
Sbjct: 314 CEAMGVPPPALQWFKDAISINK----LQNPRYQVLAGGGLRVRQLRPE-DSGIFQCLASN 368
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ L V + P+F + P+++ G + C AP+P VW + +I+
Sbjct: 369 AGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGTTA--VLRCEVSGAPRPAIVWSRGSHIL 426
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PVS D+G Y+C A N G ++ L V + S
Sbjct: 427 ASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLTVWNRTSIVTP- 485
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + + L C A + + + Y+W + V I + + + DG LL I+
Sbjct: 486 PEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIAPSSSSRVV---VEKDGSLL-IS 541
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C V S G S + V P P + + H + + W
Sbjct: 542 QTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQNLVASLNPAHSHAVVLSWVRPFD 601
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y I+ + NS W V +G E+ T R L P TY+F+V A
Sbjct: 602 GNSPVLYY-IVELSENNSPW-KVHLSDVGPEMTGVTVRG-------LTPARTYQFRVCAV 652
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 653 NQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHNGVLRGYIL 712
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + ++ + +T+YE++V A N G G S VT
Sbjct: 713 RYRLAGLPGEYQQRNIS---SPEVSYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVT 767
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 107/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P +++ +W RNG + T L R N + D
Sbjct: 215 SETTLECIANARPAEELSVTWKRNGVRV---TTGLHGFGRRLTISNPTS-------SDTG 264
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A + + + A L ++ P F P +S A NV I C P P
Sbjct: 265 VYICEAALPGSAFEPARARAFLSIIE-PPYFIAEP-KSRILAEVEENVDIVCEAMGVPPP 322
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R ++ G L + + +DSGI+ C A+N G ++ L V
Sbjct: 323 ALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPEDSGIFQCLASNAGGEVQTHTYLDVT 382
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-----AYIWTHNGVRIGNMDLNELE 232
+ + QLP T+ LRC + ++I VRI L
Sbjct: 383 NVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFML---- 438
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I S DAG Y C ++ G + T+ V
Sbjct: 439 -----LESGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLTV 476
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+ WT+G P T Y I AR + W + K
Sbjct: 1805 AEGSPGSPRDVSVTK-STSELTLHWTEGRAGRTPTTGYVIEARPSDEGLW-----DMFAK 1858
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1859 DIPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 1910
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G G S+P + A P QAP R+ L ++WEP P E QN
Sbjct: 1579 YEVVLTAYNVIGEGPASAPVEVFVGEA-APAQAPQRVHVNPLTASQLEVAWEPPPPESQN 1637
Query: 417 APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
YKI++ +NDTE F ET + N+ +T+Y V + A
Sbjct: 1638 GIIQGYKIYYWEADSQNDTEKMRVLFLPETTAKLKNLT----------SHTKYLVSISAF 1687
Query: 469 NDVGPGPESE 478
N G GP SE
Sbjct: 1688 NAAGDGPRSE 1697
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 61/277 (22%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 28 LVLTCLAEGSWPLEFKWTHN----DSELTTYTSEYKYVIP----SLQRL----DAGFYRC 75
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKF 121
+N+ L R S Q+ + +R + SE G + P + P+P+
Sbjct: 76 VVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSE------GRAAVLSLPPISSCPRPQV 129
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN-----------VH----- 165
W +DG+ I R I L+I + D+G Y A N VH
Sbjct: 130 TWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPPVHLSIAR 189
Query: 166 --GMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
GM E+ +IV +PP + +A L C A+ +++ W NGV
Sbjct: 190 DTGMPEAVAPVIV---------VPPSNRSVVAGSSETTLECIANARPAEELSVTWKRNGV 240
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
R+ T ++ G L I+N + +D G Y C
Sbjct: 241 RV---------TTGLHGFGRRLTISNPTSSDTGVYIC 268
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 39/231 (16%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 963 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTAISRWIVQGQVG------ 1016
Query: 326 NVSEHVIGKEVDRYTGRKEASIENV-------LVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
IG E + T +E + + L P++ Y F++ N +G G S S
Sbjct: 1017 -----AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRV 1071
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 435
T P AP+ I L + W PLP + N ++ Y+I +W +
Sbjct: 1072 IQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVL 1131
Query: 436 SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
++ + + R+ EF +TEYE+++QA N +G GP S V
Sbjct: 1132 TQVISD---------RLEREFTVEGLEEWTEYELQMQAFNAIGAGPWSAAV 1173
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 92/231 (39%), Gaps = 38/231 (16%)
Query: 279 PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 332
P P +QV +V S ++W G+ PI ++ + + R W + ++S
Sbjct: 1383 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1442
Query: 333 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 392
V+R L P+++Y+ ++ A N++G + S+ + T D P + P
Sbjct: 1443 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1490
Query: 393 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 440
+ + + W+P E N Y+I++R+ + +S+TLK
Sbjct: 1491 VSVTPRTTSSVRVQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1550
Query: 441 ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
+ V + E Y YEV + A N +G GP S V ++
Sbjct: 1551 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVF 1601
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 264 VGKISTKTTVI--VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIA 316
G S + VI ++ PP + P + V +TS ++W D NG P + Y+I
Sbjct: 1062 AGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI-- 1119
Query: 317 RTNWNSTWFN-VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 375
W + V VI ++R E ++E L W+ YE ++ A N +G G P S
Sbjct: 1120 -KYWCPDLPSAVLTQVISDRLER-----EFTVEG-LEEWTEYELQMQAFNAIGAG-PWSA 1171
Query: 376 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEF 434
+ + T P AP + + ++W +P QN + YKI +R K+ D E
Sbjct: 1172 AVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEP 1231
Query: 435 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
+S ++ GN + + + + YE++V A +G G
Sbjct: 1232 RSHVVR--GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNG 1268
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1284 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1341
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR---IG 394
++T + L P S Y F++ A G+GEP + ++P AP R +
Sbjct: 1342 QFTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP--APPRELQVP 1392
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
L + W +P +P Y+ + R+ ++Q+ + VV
Sbjct: 1393 QADVTARSLCLRW--VPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEATACVVERLR 1450
Query: 455 EFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
F T Y+++++A ND+G E+E VT D
Sbjct: 1451 PF--TSYKLRLKATNDIGDSDFSAETEAVTTLQD 1482
>gi|119607692|gb|EAW87286.1| sidekick homolog 1 (chicken), isoform CRA_a [Homo sapiens]
Length = 2072
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 202/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 267 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 321
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP++ T +G + C APKP WK++ +I+
Sbjct: 322 EGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEVSGAPKPAITWKRENHIL 379
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 380 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHP- 438
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + L C A + + + Y+W + V + + + + DG LL I+
Sbjct: 439 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-IS 494
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + V H + + W
Sbjct: 495 QTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPFD 554
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI +Y I+ + NS W V +G E+ T + L P TY+F+V A
Sbjct: 555 GNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 605
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 606 NEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 665
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 666 RYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 720
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 105/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 168 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 217
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y C A + + ++A L ++ P F P ES A V I C P P
Sbjct: 218 PYVCEAALPGSAFEPARATAFLFIIE-PPYFTAEP-ESRISAEVEETVDIGCQAMGVPLP 275
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 276 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 335
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 336 NIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 391
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 392 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 429
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1758 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1811
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1812 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 1863
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 30/223 (13%)
Query: 53 RYLNP---ERDPAMYQCRAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN 106
RY+ P + D Y+C +N+ L R S Q+ + +R S+ A
Sbjct: 12 RYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNL 71
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 166
+ I + P+P+ W ++G+ I R I L+I + D+G Y A N
Sbjct: 72 LPI----TSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKN 127
Query: 167 MDESKGRLI---VLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYI 215
+ I + E + P I +A L C A + D++
Sbjct: 128 GENKTSPFIHLSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVT 187
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
W NGVRI T ++ G L I+N + AD G Y C
Sbjct: 188 WKRNGVRI---------TSGLHSFGRRLTISNPTSADTGPYVC 221
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 86/223 (38%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1344 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1401
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1402 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1451
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 444
+ I W+P E N Y+I++R+ KN ++E + +
Sbjct: 1452 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALRAELTAQSSFKT 1511
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1512 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1554
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1532 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1590
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP+
Sbjct: 1591 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPK 1648
Query: 477 SE 478
S+
Sbjct: 1649 SD 1650
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 914 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 969
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G P SPS
Sbjct: 970 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1021
Query: 377 PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 432
+ T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1022 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1077
Query: 433 EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
+ QS + + + R+ EF + EYE+++QA N VG GP SEVV
Sbjct: 1078 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVV 1126
>gi|149051180|gb|EDM03353.1| rCG62174, isoform CRA_b [Rattus norvegicus]
Length = 1250
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 202/483 (41%), Gaps = 45/483 (9%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 332 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 385
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 386 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 441
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 442 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 498
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 499 TRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 551
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L +++ D G Y C +T+ +S + V P P +++ S + WT
Sbjct: 552 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVDVPNPPFDLELTNQLDKSVQLTWT 611
Query: 301 DGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
G N PIT + I + W + +E + + + L P+ Y
Sbjct: 612 PGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQLKLSPYVNYS 661
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+PL + N P
Sbjct: 662 FRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGP 721
Query: 419 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 722 GLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEP 776
Query: 478 EVV 480
V
Sbjct: 777 AAV 779
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 241 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 292
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 293 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 349
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 350 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVL----- 403
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 404 --AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 455
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 456 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 498
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 115/288 (39%), Gaps = 34/288 (11%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN--PEA 115
E +YQC A+N+ R ++ ++ +F++ P G G++ F N PE
Sbjct: 109 ETYEGVYQCTARNE---RGAAVSNNIVVRPSTFQRLPQSERVSQGLNGDL-YFSNVLPED 164
Query: 116 APKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
+ + + + ++ I +IS +D+ + + T +G SK R
Sbjct: 165 TREDYICYARFNHTQTIQQKQPISLK---VISVDELNDTIAANLSDTEFYGAKSSKERPP 221
Query: 176 VLHGP----SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
P S+ E+L + L L C A E L W G + +N
Sbjct: 222 TFLTPEGNESHKEELRGNV-------LSLECIA--EGLPTPVIYWIKED---GTLPVNRT 269
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
N L+I + S AD+G Y+C+ K+ +G + +V V+ P
Sbjct: 270 FYRNFK---KTLQIIHVSEADSGNYQCIAKNALGAVHHTISVTVKAAP 314
>gi|197215678|gb|ACH53067.1| L1 cell adhesion molecule isoform 2 precursor (predicted) [Otolemur
garnettii]
Length = 1226
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 218/489 (44%), Gaps = 58/489 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + E LP +DQ +Y IQ L + + P D + QC A+N
Sbjct: 323 CQVQGRPQPEVTWRING--IPVEELP-KDQ-KYQIQRGALILSNVQPS-DTMVTQCEARN 377
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L K +++TY A EG + C AP P W ++G
Sbjct: 378 RHGVLLANAYIYVVQLPA--KILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGM 435
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-S 181
+ R + NG L I + +D+G Y C A N + + K ++ GP S
Sbjct: 436 TVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRS 495
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDG 240
E+ ++T C A + L + W +G DL+EL ++ I+
Sbjct: 496 AIEKKGSRVTFT--------CQASFDPSLQPSITWRGDG-----GDLHELGDSDKYFIED 542
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATI 297
G L I + ++D G Y C+ + + + +K ++V G PGL +++ ++H ++ +
Sbjct: 543 GRLVIHSLDYSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRL 602
Query: 298 QWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
W+ + PI Y I +A W S +GK T A+++ L
Sbjct: 603 SWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGKVPGNQTS---ATLK--L 648
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 649 SPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLR 708
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
NAP + Y++ WR + E + V + + + + YE+KVQA+N
Sbjct: 709 WIDWNAPQVQYRVQWRPQGTRGIWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQ 763
Query: 472 GPGPESEVV 480
G GPE +V
Sbjct: 764 GKGPEPQVT 772
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 187/490 (38%), Gaps = 58/490 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 229 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 280
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 281 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 337
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG +++ + Y
Sbjct: 338 NGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHG-------VLLANAYIYV 390
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR-IGNMDLNELETPN-INIDGG 241
QLP KI + + T LL A+ V+ +G + L+ G
Sbjct: 391 VQLPAKI-LTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANG 449
Query: 242 LLEITNASFADAGEYECVVK------STVGKISTK-TTVIVEGPPGLPGGVQVVEVHKTS 294
L I + D G Y C + V + K T IV+GP + K
Sbjct: 450 TLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRS--------AIEKKG 501
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ + +T A+ P I R + H +G + D+Y + + L
Sbjct: 502 SRVTFTCQASFD-PSLQPSITWRGDGGDL------HELG-DSDKYFIEDGRLVIHSLDYS 553
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ +A EL E + +P P S + K + +SW P E
Sbjct: 554 DQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDL--HLLKQSQVRLSWSPA--ED 609
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
NAP Y I + K + +L K GN A +++ Y Y +V AIN GP
Sbjct: 610 HNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSP---YVHYTFRVTAINKYGP 666
Query: 474 G---PESEVV 480
G P SE V
Sbjct: 667 GEPSPASETV 676
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 115/304 (37%), Gaps = 52/304 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W ++G E L L + I N +R
Sbjct: 21 DISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSFTITGNNSNFA----QR 76
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAA 116
+Y+C A N+L T S + P + K +P+E E EG +V + C+P +
Sbjct: 77 FQGIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKPVEVE----EGESVILPCHPPPS 132
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------ 161
+P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 133 AEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVITSDNHSDYICHAHFPGTRTIIQKE 192
Query: 162 ------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
+ M + K RL+ S + + L L C A + ++
Sbjct: 193 PIDLRVKATNSMIDRKPRLLFPTNSSSH------LVALQGEPLVLECIAEGFPTPTIKWL 246
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G M + + N N L++ N D GEY C+ ++++G V V
Sbjct: 247 RPS-----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVTV 298
Query: 276 EGPP 279
E P
Sbjct: 299 EAAP 302
>gi|148697923|gb|EDL29870.1| L1 cell adhesion molecule [Mus musculus]
Length = 1255
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 211/478 (44%), Gaps = 36/478 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG ++ ET+ +DQ +Y I+ L + + P D + QC A+N
Sbjct: 348 CQVQGRPQPEITWRING--MSMETVN-KDQ-KYRIEQGSLILSNVQPS-DTMVTQCEARN 402
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 403 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 460
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG L I + +D+G Y C A N L V + Q P
Sbjct: 461 TVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPR 519
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITN 247
+ C A + L + W +G DL E ++ I+ G L I +
Sbjct: 520 SAIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQS 574
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGAT 304
++D G Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 575 LDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAED 634
Query: 305 NGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 635 HNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVT 684
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I Y
Sbjct: 685 AINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQY 744
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ WR + + ET +E V + + + + YE+KVQA+N+ G GPE +V
Sbjct: 745 RVQWRPQG----KQETWREQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVT 797
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 186/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 254 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 305
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 306 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 362
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 363 NGMSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHG-------LLLANAYIYV 415
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 416 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 469
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 470 PYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSA-IEKKGAR 528
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 529 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGKLVIQSLDYSDQ 580
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A EL E + +P P+ S K + +SW P E N
Sbjct: 581 GNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 636
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
+P Y I F K+ E K GN +++ Y Y +V AIN GPG
Sbjct: 637 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 693
Query: 475 --PESEVV 480
P SE V
Sbjct: 694 PSPVSETV 701
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 47 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 106
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N+L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 107 RCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPLRIYW 165
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 166 MNSKILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 225
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S ++ ++L L C A E W H
Sbjct: 226 TNSMIDRKPRLLFPTNSS------SRLVALQGQSLILECIA--EGFPTPTIKWLHPS--- 274
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 275 DPMPTDRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 327
>gi|410981644|ref|XP_003997176.1| PREDICTED: protein sidekick-2 [Felis catus]
Length = 2247
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 212/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C A GVP + W+++ ++ L +R+ + D L I L P+ D M+QC A+
Sbjct: 403 CRAKGVPPPSIIWYKDAAVVEVGRL-----NRFRQRGDGGLQISGLVPD-DTGMFQCFAR 456
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N +S L V ++ P+ + PL+S +G +V + C AP+P W+K I
Sbjct: 457 NAAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERI 514
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LL+SP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 515 LASGSVQLPRFTLLESGSLLVSPTRISDAGTYTCLATNSRGVDEASADLVVW-ARTRITK 573
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + V Y +G +G M+ N P I +D G L
Sbjct: 574 PPQDQSVIKGTQASMVCGVTHDPRVTVRYXXXKDGATLG-MESN----PRIRLDKNGSLH 628
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + + + + W
Sbjct: 629 ISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPERPVATLSTAERRAINLTWAKP 688
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y ++ + N+ W V+ VD EA+ V LVP +Y+F+
Sbjct: 689 FDGNSPLLRY-VLEMSENNAPW-----TVLLASVD-----PEATSVMVKGLVPARSYQFR 737
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 738 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGLLK 797
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 798 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 852
Query: 478 EVVTIW 483
VT W
Sbjct: 853 SKVTEW 858
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P E QN
Sbjct: 1668 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1726
Query: 417 APNIYYKI-FW----RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
YKI FW +++N TE ++ L E G VR+ + YT Y V V A N
Sbjct: 1727 GDIQGYKIYFWEAQAQRRNVTERVKTLFLAENG------VRLKNLTGYTAYMVSVAAFNA 1780
Query: 471 VGPGPES 477
G GP S
Sbjct: 1781 AGDGPRS 1787
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 39/265 (14%)
Query: 234 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 286
PN+ ++ GL +T + E + G++S T I G PP LPG +
Sbjct: 1020 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1073
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 343
+ + S T+Q+ G I+ + + A+ W V H + E D R
Sbjct: 1074 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNEPD---ARS 1128
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 1129 MEVPE--LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1186
Query: 404 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 457
+ W PLP + N ++ YKI K + + +TL + R+ E+
Sbjct: 1187 WLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1238
Query: 458 --YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1239 EEWTEYRVQVQAFNAIGSGPWSQTV 1263
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 179/486 (36%), Gaps = 44/486 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMYQCRA 68
CE G P +W + +L S ++ L R+ + ++ + ++P R D Y C A
Sbjct: 496 CETSGAPRPAITWQKGERILASGSVQLP---RFTLLESGSLL--VSPTRISDAGTYTCLA 550
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N +SA L V+ + K P + G ++ + ++ KDG
Sbjct: 551 TNSRGVDEASADL-VVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYXXXKDGA 609
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ +NG+L IS D G Y+C + G D L V P E+
Sbjct: 610 TLGMESNPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPERP 669
Query: 187 PPKITIAAHRNLQLRCSA----------HTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
++ A R + L + + E+ + WT V + ++D E ++
Sbjct: 670 VATLSTAERRAINLTWAKPFDGNSPLLRYVLEMSENNAPWT---VLLASVDP---EATSV 723
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G L+ + F + V K K + + ++ E P P V S
Sbjct: 724 MVKG-LVPARSYQFRLCAVND-VGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIM 781
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL----V 352
IQW + + I R + ++ +G + T +A + N+L +
Sbjct: 782 IQWQPPPESHQNGLLKGYIIR-------YCLAGLPVGYQFKNIT---DADVNNLLLEDLI 831
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 832 IWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNAPSP 890
Query: 413 EKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 891 QFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCFTTP 950
Query: 472 GPGPES 477
G GP S
Sbjct: 951 GDGPRS 956
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
PP P VQ +V S + W G+ P+ +Y + R + W S V
Sbjct: 1475 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWALHSASV------ 1527
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
+ A + + L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1528 --SHNASAFVVDRLKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIVSVTP 1585
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ I W+P +K N + ++I +R+ + TL+ N G + S +
Sbjct: 1586 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSMYS 1645
Query: 458 -------------------YTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1646 MRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1684
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1907 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1963
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1964 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1997
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 134/382 (35%), Gaps = 58/382 (15%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 117 LVLTCMAEGSWPLEFKWLHNSRELTKFSL----EYRYMITSLDRT--------HAGFYRC 164
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAA--PKPKFVW 123
+N++ + SF+ E E Y G + P A P+P+ W
Sbjct: 165 IVRNRMGALLQRQTEVQVAYMGSFE----EGEKYQSVSHGEAAVIRAPRIASFPRPQVTW 220
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----- 178
+DG I R I L+I D+G Y A N D + I L
Sbjct: 221 FRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVG 280
Query: 179 GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNE 230
GP+ I +A + + C A+ L+ + W +GV + G D N
Sbjct: 281 GPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHITWKKDGVPLSGGISDYNR 340
Query: 231 LETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L I + +DAG YEC + S++ + + V PP V+
Sbjct: 341 -----------RLTIPGPTGSDAGYYECEAALRSSSIPSVVRGAYLSVLEPPQF---VKE 386
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ H T+ + D + + II W+ + V ++R+ R + +
Sbjct: 387 PDRHITAEMEKVMDIPCRAKGVPPPSII--------WYKDAAVVEVGRLNRFRQRGDGGL 438
Query: 348 E-NVLVPWSTYEFKVIAGNELG 368
+ + LVP T F+ A N G
Sbjct: 439 QISGLVPDDTGMFQCFARNAAG 460
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y++ R N +T + V+ +
Sbjct: 1374 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQVTHRLN-ATTANTATVEVLAPSARQ 1432
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1433 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1484
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY + R+ + + N VV F
Sbjct: 1485 DVKARSVLLSWE--PGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNASAFVVDRLKPF 1542
Query: 457 YYTEYEVKVQAINDVGPGPESE 478
T Y+ +V+A ND+G SE
Sbjct: 1543 --TSYKFRVKATNDIGDSEFSE 1562
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R + + +
Sbjct: 1165 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1222
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1223 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1274
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1275 GPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1333
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1334 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1362
>gi|395860585|ref|XP_003802591.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Otolemur
garnettii]
Length = 1253
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 215/488 (44%), Gaps = 58/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + E LP +DQ +Y IQ L + + P D + QC A+N
Sbjct: 354 CQVQGRPQPEVTWRING--IPVEELP-KDQ-KYQIQRGALILSNVQPS-DTMVTQCEARN 408
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L K +++TY A EG + C AP P W ++G
Sbjct: 409 RHGVLLANAYIYVVQLPA--KILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGM 466
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-S 181
+ R + NG L I + +D+G Y C A N + + K ++ GP S
Sbjct: 467 TVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRS 526
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDG 240
E+ ++T C A + L + W +G DL+EL ++ I+
Sbjct: 527 AIEKKGSRVTFT--------CQASFDPSLQPSITWRGDG-----GDLHELGDSDKYFIED 573
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATI 297
G L I + ++D G Y C+ + + + +K ++V G PGL +++ ++H ++ +
Sbjct: 574 GRLVIHSLDYSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRL 633
Query: 298 QWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
W+ + PI Y I +A W S +GK + S L
Sbjct: 634 SWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSATLKL 679
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 680 SPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLR 739
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
NAP + Y++ WR + E + V + + + + YE+KVQA+N
Sbjct: 740 WIDWNAPQVQYRVQWRPQGTRGIWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQ 794
Query: 472 GPGPESEV 479
G GPE +V
Sbjct: 795 GKGPEPQV 802
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 187/490 (38%), Gaps = 58/490 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG +++ + Y
Sbjct: 369 NGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHG-------VLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR-IGNMDLNELETPN-INIDGG 241
QLP KI + + T LL A+ V+ +G + L+ G
Sbjct: 422 VQLPAKI-LTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANG 480
Query: 242 LLEITNASFADAGEYECVVK------STVGKISTK-TTVIVEGPPGLPGGVQVVEVHKTS 294
L I + D G Y C + V + K T IV+GP + K
Sbjct: 481 TLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRS--------AIEKKG 532
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ + +T A+ P I R + H +G + D+Y + + L
Sbjct: 533 SRVTFTCQASFD-PSLQPSITWRGDGGDL------HELG-DSDKYFIEDGRLVIHSLDYS 584
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ +A EL E + +P P S + K + +SW P E
Sbjct: 585 DQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDL--HLLKQSQVRLSWSPA--ED 640
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
NAP Y I + K + +L K GN A +++ Y Y +V AIN GP
Sbjct: 641 HNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSP---YVHYTFRVTAINKYGP 697
Query: 474 G---PESEVV 480
G P SE V
Sbjct: 698 GEPSPASETV 707
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 115/304 (37%), Gaps = 52/304 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W ++G E L L + I N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSFTITGNNSNFA----QR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAA 116
+Y+C A N+L T S + P + K +P+E E EG +V + C+P +
Sbjct: 108 FQGIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKPVEVE----EGESVILPCHPPPS 163
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------ 161
+P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 164 AEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVITSDNHSDYICHAHFPGTRTIIQKE 223
Query: 162 ------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
+ M + K RL+ S + + L L C A + ++
Sbjct: 224 PIDLRVKATNSMIDRKPRLLFPTNSSSH------LVALQGEPLVLECIAEGFPTPTIKWL 277
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G M + + N N L++ N D GEY C+ ++++G V V
Sbjct: 278 RPS-----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVTV 329
Query: 276 EGPP 279
E P
Sbjct: 330 EAAP 333
>gi|317419599|emb|CBN81636.1| Protein sidekick-2 [Dicentrarchus labrax]
Length = 2147
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 204/481 (42%), Gaps = 33/481 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP W+++ ++ P++ + L + L P+ D M+QC A+N
Sbjct: 282 CQARGVPQPDIVWYKDALPID----PVKTPRYRVLVGGSLQVNGLLPD-DTGMFQCFARN 336
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ ++ L V ++ P+ P S++ +G +V + C AP+P W+K ++
Sbjct: 337 RAGEVQTNTYLAVTSIAPNITAGP--SDSTVIDGMSVILHCETSGAPRPAITWQKGERVL 394
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C A+N G+DE+ L+V +
Sbjct: 395 ASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASADLVVW-ARTRITTP 453
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEI 245
P ++ + C + + V ++W G I N P + +D G L I
Sbjct: 454 PQDQSVIKGTKAIMTCGVTHDPSVTVRHVWEKEGSVI-----NVQSIPRMRLDADGTLHI 508
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + K + + W
Sbjct: 509 SQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPTAMLSTSEKRAIDLAWAKPF 568
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W + ++ + A N L+P +Y+F++ A
Sbjct: 569 DGNSPLIRYILEVSEN-NAPWAILLANIEPEST--------AVTVNGLIPARSYQFRLCA 619
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P AP + G + I W+P P QN Y
Sbjct: 620 VNDVGKGQFSKETDRVSLPEEPPSAAPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYT 679
Query: 424 IFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R ++Q +K + + + + +T YE++V A N G G S VT
Sbjct: 680 VRYRLTGLPVDYQ---IKNISSPDVTNLLLEDLIIWTNYEIEVAAYNGAGLGTFSHKVTE 736
Query: 483 W 483
W
Sbjct: 737 W 737
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 121/295 (41%), Gaps = 65/295 (22%)
Query: 220 GVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTK 270
G RI + N T PN+ ++ GL +T + AG + G++S+
Sbjct: 879 GYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAG----MTSKGQGQLSSS 934
Query: 271 TTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NST 323
T I G PP LPG + + + S T+Q+ G I+ +++ A+ N
Sbjct: 935 T--ISSGVPPELPGPPTNMAISNIGPRSVTLQFKPGYDGKTSISRWQVEAQVGVVGENED 992
Query: 324 WFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
W V H + E EA V L P++ Y F++ N +G PS PS + T
Sbjct: 993 WVTV--HQVSNE-------PEARSLEVPGLNPYTFYRFRMRQVNIVGISPPSQPSRKIQT 1043
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ--NAPNIYYKIFWRK----------- 428
P AP+ + L + W PLP + NA + Y++ + +
Sbjct: 1044 LPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYNGNAEQVGYRVQYSRAGSQGRALIHI 1103
Query: 429 ---KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ + EF E L+E +TEYEV+VQA+N +G GP S+ V
Sbjct: 1104 IADRQEREFTIEDLEE----------------WTEYEVRVQAVNGIGMGPWSQPV 1142
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 122/339 (35%), Gaps = 43/339 (12%)
Query: 50 LTIRYLNPERD---PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN 106
L RYL P D Y+C +N++ + SF++ GEG
Sbjct: 24 LEYRYLIPSLDRSHAGFYRCIVRNRVGALLQRRTEVQVAFMGSFEEGERTQSVSQGEGA- 82
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 166
V + P+P+ W +DG I R I + L+I D+G Y A N
Sbjct: 83 VVPAPRIRSFPQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKN 142
Query: 167 MDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYI 215
+ + I L GP+ I + + + C A+ L+ ++
Sbjct: 143 GENKTSQPITLSVENVGGPADPIAPTIIIPPRNTSVVTGTSEVTMECVANARPLIKLSIS 202
Query: 216 WTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTK 270
W NGV + G D N L I + +DAG YEC + S+V +S
Sbjct: 203 WRKNGVLVTSGLSDFNR-----------RLTILSPVVSDAGYYECEAILRSSSVPSVSAG 251
Query: 271 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
+ V PP ++ E H T+ + D R + I+ W+ +
Sbjct: 252 AYLHVLEPPQF---IKEPEKHITAEMEKVVDIPCQARGVPQPDIV--------WYKDALP 300
Query: 331 VIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 368
+ + RY S++ N L+P T F+ A N G
Sbjct: 301 IDPVKTPRYRVLVGGSLQVNGLLPDDTGMFQCFARNRAG 339
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 80/212 (37%), Gaps = 36/212 (16%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+V + W G+ P+ +Y + R S W V + E Y I
Sbjct: 1364 DVQARQVLLLWEPGSDGLSPVRYYTVQHRELPESNW-TVHSASVNHEATSY-------IV 1415
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L P+++Y+F+V A N++G E S S T D P +AP+ + + I W+
Sbjct: 1416 SRLKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDEAPTILSVTPHTTTSVLIRWQ 1475
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------------ 456
P EK N + ++I +R E + L+ Y I +E
Sbjct: 1476 PPSEEKINGILLGFRIRYR-----ELLYDRLRSYSVHTINSASTWAELNAPYSIRNLSDS 1530
Query: 457 -----------YYTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1531 TLIQYELDKLSKHKRYEIRMSVYNAVGEGPAS 1562
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G SSP + A P P + L ++W+P P + QN
Sbjct: 1546 YEIRMSVYNAVGEGPASSPQEVFVGEA-VPTAPPQNVAIQSATATQLDVTWDPPPVDAQN 1604
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YK+ FW ++KN+TE ++ + E G V++ + YT Y + V N G
Sbjct: 1605 GDIQGYKVYFWEFQRKNETERLRTLFMPEGG------VKLKNLTGYTTYMISVAPFNAAG 1658
Query: 473 PGPES 477
GP S
Sbjct: 1659 DGPRS 1663
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
H+I +R E +IE+ L W+ YE +V A N +G G S P + T P
Sbjct: 1102 HIIADRQER-----EFTIED-LEEWTEYEVRVQAVNGIGMGPWSQPV-RGRTRESVPSCG 1154
Query: 390 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K+ D+ T++ GN
Sbjct: 1155 PTNVSAFATTSSSILVRWFEVPEPDRNGLILGYKVVYKEKDSDSTVHFWTVE--GN-ATH 1211
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPG 474
V++ Y YE++V A +G G
Sbjct: 1212 SVQLTGLGKYVLYEIQVLAFTRIGDG 1237
>gi|112293279|ref|NP_032504.3| neural cell adhesion molecule L1 precursor [Mus musculus]
gi|34785231|gb|AAH56988.1| L1 cell adhesion molecule [Mus musculus]
Length = 1259
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 211/478 (44%), Gaps = 36/478 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG ++ ET+ +DQ +Y I+ L + + P D + QC A+N
Sbjct: 353 CQVQGRPQPEITWRING--MSMETVN-KDQ-KYRIEQGSLILSNVQPS-DTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 408 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG L I + +D+G Y C A N L V + Q P
Sbjct: 466 TVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPR 524
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITN 247
+ C A + L + W +G DL E ++ I+ G L I +
Sbjct: 525 SAIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQS 579
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGAT 304
++D G Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 580 LDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAED 639
Query: 305 NGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 640 HNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVT 689
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I Y
Sbjct: 690 AINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQY 749
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ WR + + ET +E V + + + + YE+KVQA+N+ G GPE +V
Sbjct: 750 RVQWRPQG----KQETWREQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVT 802
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 186/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 259 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 367
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 368 NGMSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHG-------LLLANAYIYV 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 421 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 474
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 475 PYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSA-IEKKGAR 533
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 534 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGKLVIQSLDYSDQ 585
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A EL E + +P P+ S K + +SW P E N
Sbjct: 586 GNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 641
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
+P Y I F K+ E K GN +++ Y Y +V AIN GPG
Sbjct: 642 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 698
Query: 475 --PESEVV 480
P SE V
Sbjct: 699 PSPVSETV 706
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 52 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N+L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 112 RCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 171 MNSKILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S ++ ++L L C A E W H
Sbjct: 231 TNSMIDRKPRLLFPTNSS------SRLVALQGQSLILECIA--EGFPTPTIKWLHPS--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 280 DPMPTDRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 332
>gi|395860583|ref|XP_003802590.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Otolemur
garnettii]
Length = 1257
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 218/488 (44%), Gaps = 58/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + E LP +DQ +Y IQ L + + P D + QC A+N
Sbjct: 354 CQVQGRPQPEVTWRING--IPVEELP-KDQ-KYQIQRGALILSNVQPS-DTMVTQCEARN 408
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L K +++TY A EG + C AP P W ++G
Sbjct: 409 RHGVLLANAYIYVVQLPA--KILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGM 466
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-S 181
+ R + NG L I + +D+G Y C A N + + K ++ GP S
Sbjct: 467 TVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRS 526
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDG 240
E+ ++T C A + L + W +G DL+EL ++ I+
Sbjct: 527 AIEKKGSRVTFT--------CQASFDPSLQPSITWRGDG-----GDLHELGDSDKYFIED 573
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATI 297
G L I + ++D G Y C+ + + + +K ++V G PGL +++ ++H ++ +
Sbjct: 574 GRLVIHSLDYSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRL 633
Query: 298 QWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
W+ + PI Y I +A W S +GK T A+++ L
Sbjct: 634 SWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGKVPGNQTS---ATLK--L 679
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 680 SPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLR 739
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
NAP + Y++ WR + E + V + + + + YE+KVQA+N
Sbjct: 740 WIDWNAPQVQYRVQWRPQGTRGIWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQ 794
Query: 472 GPGPESEV 479
G GPE +V
Sbjct: 795 GKGPEPQV 802
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 187/490 (38%), Gaps = 58/490 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG +++ + Y
Sbjct: 369 NGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHG-------VLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR-IGNMDLNELETPN-INIDGG 241
QLP KI + + T LL A+ V+ +G + L+ G
Sbjct: 422 VQLPAKI-LTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANG 480
Query: 242 LLEITNASFADAGEYECVVK------STVGKISTK-TTVIVEGPPGLPGGVQVVEVHKTS 294
L I + D G Y C + V + K T IV+GP + K
Sbjct: 481 TLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRS--------AIEKKG 532
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ + +T A+ P I R + H +G + D+Y + + L
Sbjct: 533 SRVTFTCQASFD-PSLQPSITWRGDGGDL------HELG-DSDKYFIEDGRLVIHSLDYS 584
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ +A EL E + +P P S + K + +SW P E
Sbjct: 585 DQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDL--HLLKQSQVRLSWSPA--ED 640
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
NAP Y I + K + +L K GN A +++ Y Y +V AIN GP
Sbjct: 641 HNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSP---YVHYTFRVTAINKYGP 697
Query: 474 G---PESEVV 480
G P SE V
Sbjct: 698 GEPSPASETV 707
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 115/304 (37%), Gaps = 52/304 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W ++G E L L + I N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSFTITGNNSNFA----QR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAA 116
+Y+C A N+L T S + P + K +P+E E EG +V + C+P +
Sbjct: 108 FQGIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKPVEVE----EGESVILPCHPPPS 163
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------ 161
+P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 164 AEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVITSDNHSDYICHAHFPGTRTIIQKE 223
Query: 162 ------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
+ M + K RL+ S + + L L C A + ++
Sbjct: 224 PIDLRVKATNSMIDRKPRLLFPTNSSSH------LVALQGEPLVLECIAEGFPTPTIKWL 277
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G M + + N N L++ N D GEY C+ ++++G V V
Sbjct: 278 RPS-----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVTV 329
Query: 276 EGPP 279
E P
Sbjct: 330 EAAP 333
>gi|119220552|ref|NP_689957.3| protein sidekick-1 isoform 1 [Homo sapiens]
gi|296452965|sp|Q7Z5N4.3|SDK1_HUMAN RecName: Full=Protein sidekick-1; Flags: Precursor
Length = 2213
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 202/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 408 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 462
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP++ T +G + C APKP WK++ +I+
Sbjct: 463 EGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEVSGAPKPAITWKRENHIL 520
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 521 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHP- 579
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + L C A + + + Y+W + V + + + + DG LL I+
Sbjct: 580 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-IS 635
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + V H + + W
Sbjct: 636 QTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPFD 695
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI +Y I+ + NS W V +G E+ T + L P TY+F+V A
Sbjct: 696 GNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 746
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 747 NEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 806
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 807 RYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 861
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 105/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 309 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 358
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y C A + + ++A L ++ P F P ES A V I C P P
Sbjct: 359 PYVCEAALPGSAFEPARATAFLFIIE-PPYFTAEP-ESRISAEVEETVDIGCQAMGVPLP 416
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 417 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 476
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 477 NIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 532
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 533 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 570
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 100/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+ +SE + +Y I +++ L D Y+C
Sbjct: 122 LVLTCLAEGSWPLEFKWMRD----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 169
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ A + I + P+P+ W
Sbjct: 170 VVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI----TSYPRPQVTW 225
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I +
Sbjct: 226 FREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIHLSIARDV 285
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A L C A + D++ W NGVRI
Sbjct: 286 GTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI--------- 336
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 337 TSGLHSFGRRLTISNPTSADTGPYVC 362
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 85/223 (38%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1542
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 444
+ I W+P E N Y+I++R+ KN +E + +
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKT 1652
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1695
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1673 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1731
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP+
Sbjct: 1732 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPK 1789
Query: 477 SE 478
S+
Sbjct: 1790 SD 1791
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G P SPS
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1162
Query: 377 PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 432
+ T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1163 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1218
Query: 433 EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
+ QS + + + R+ EF + EYE+++QA N VG GP SEVV
Sbjct: 1219 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVV 1267
>gi|32351274|gb|AAP75619.1| sidekick-like protein 1 [Homo sapiens]
Length = 2213
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 202/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 408 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 462
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP++ T +G + C APKP WK++ +I+
Sbjct: 463 EGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEVSGAPKPAITWKRENHIL 520
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 521 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHP- 579
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + L C A + + + Y+W + V + + + + DG LL I+
Sbjct: 580 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-IS 635
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + V H + + W
Sbjct: 636 QTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPFD 695
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI +Y I + NS+ + V +G E+ T + L P TY+F+V A
Sbjct: 696 GNSPILYY--IVELSENSSPWKVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 746
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 747 NEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 806
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 807 RYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 861
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 106/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R+ N + D
Sbjct: 309 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRHLTISNPTSA-------DTG 358
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y C A + + ++A L ++ P F P ES A V I C P P
Sbjct: 359 PYVCEAALPGSAFEPARATAFLFIIE-PPYFTAEP-ESRISAEVEETVDIGCQAMGVPLP 416
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 417 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 476
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 477 NIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 532
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 533 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 570
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 100/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+ +SE + +Y I +++ L D Y+C
Sbjct: 122 LVLTCLAEGSWPLEFKWMRD----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 169
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ A + I + P+P+ W
Sbjct: 170 VVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI----TSYPRPQVTW 225
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I +
Sbjct: 226 FREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIHLSIARDV 285
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A L C A + D++ W NGVRI
Sbjct: 286 GTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI--------- 336
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 337 TSGLHSFGRHLTISNPTSADTGPYVC 362
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 85/223 (38%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1542
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 444
+ I W+P E N Y+I++R+ KN +E + +
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALXAELTAQSSFKT 1652
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1695
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1673 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1731
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP+
Sbjct: 1732 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPK 1789
Query: 477 SE 478
S+
Sbjct: 1790 SD 1791
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G P SPS
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1162
Query: 377 PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 432
+ T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1163 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1218
Query: 433 EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
+ QS + + + R+ EF + EYE+++QA N VG GP SEVV
Sbjct: 1219 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVV 1267
>gi|395860587|ref|XP_003802592.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Otolemur
garnettii]
Length = 1248
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 218/488 (44%), Gaps = 58/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + E LP +DQ +Y IQ L + + P D + QC A+N
Sbjct: 349 CQVQGRPQPEVTWRING--IPVEELP-KDQ-KYQIQRGALILSNVQPS-DTMVTQCEARN 403
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L K +++TY A EG + C AP P W ++G
Sbjct: 404 RHGVLLANAYIYVVQLPA--KILTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGM 461
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHGP-S 181
+ R + NG L I + +D+G Y C A N + + K ++ GP S
Sbjct: 462 TVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRS 521
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDG 240
E+ ++T C A + L + W +G DL+EL ++ I+
Sbjct: 522 AIEKKGSRVTFT--------CQASFDPSLQPSITWRGDG-----GDLHELGDSDKYFIED 568
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATI 297
G L I + ++D G Y C+ + + + +K ++V G PGL +++ ++H ++ +
Sbjct: 569 GRLVIHSLDYSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDLHLLKQSQVRL 628
Query: 298 QWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
W+ + PI Y I +A W S +GK T A+++ L
Sbjct: 629 SWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGKVPGNQTS---ATLK--L 674
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 675 SPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLR 734
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
NAP + Y++ WR + E + V + + + + YE+KVQA+N
Sbjct: 735 WIDWNAPQVQYRVQWRPQGTRGIWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQ 789
Query: 472 GPGPESEV 479
G GPE +V
Sbjct: 790 GKGPEPQV 797
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 187/490 (38%), Gaps = 58/490 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG +++ + Y
Sbjct: 364 NGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQCEARNRHG-------VLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR-IGNMDLNELETPN-INIDGG 241
QLP KI + + T LL A+ V+ +G + L+ G
Sbjct: 417 VQLPAKI-LTGDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANG 475
Query: 242 LLEITNASFADAGEYECVVK------STVGKISTK-TTVIVEGPPGLPGGVQVVEVHKTS 294
L I + D G Y C + V + K T IV+GP + K
Sbjct: 476 TLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKDATRIVQGPRS--------AIEKKG 527
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ + +T A+ P I R + H +G + D+Y + + L
Sbjct: 528 SRVTFTCQASFD-PSLQPSITWRGDGGDL------HELG-DSDKYFIEDGRLVIHSLDYS 579
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ +A EL E + +P P S + K + +SW P E
Sbjct: 580 DQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKLSDL--HLLKQSQVRLSWSPA--ED 635
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
NAP Y I + K + +L K GN A +++ Y Y +V AIN GP
Sbjct: 636 HNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSP---YVHYTFRVTAINKYGP 692
Query: 474 G---PESEVV 480
G P SE V
Sbjct: 693 GEPSPASETV 702
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 115/304 (37%), Gaps = 52/304 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W ++G E L L + I N +R
Sbjct: 47 DISLKCEASGKPEVQFRWTKDGIHFQPKEELGVTVQQLPHSGSFTITGNNSNFA----QR 102
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAA 116
+Y+C A N+L T S + P + K +P+E E EG +V + C+P +
Sbjct: 103 FQGIYRCFASNKLGTAMSHKIQLMAEGAPKWPKETVKPVEVE----EGESVILPCHPPPS 158
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------ 161
+P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 159 AEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVITSDNHSDYICHAHFPGTRTIIQKE 218
Query: 162 ------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
+ M + K RL+ S + + L L C A + ++
Sbjct: 219 PIDLRVKATNSMIDRKPRLLFPTNSSSH------LVALQGEPLVLECIAEGFPTPTIKWL 272
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G M + + N N L++ N D GEY C+ ++++G V V
Sbjct: 273 RPS-----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHAYYVTV 324
Query: 276 EGPP 279
E P
Sbjct: 325 EAAP 328
>gi|355560430|gb|EHH17116.1| Protein sidekick-1, partial [Macaca mulatta]
Length = 2035
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 204/479 (42%), Gaps = 33/479 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 310 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 364
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP ++T +G + C APKP WK++ +I+
Sbjct: 365 EGGEIQTHTYLDVTNIAPVFTQRP--ADTTVTDGMTAILRCEVSGAPKPAITWKRENHIL 422
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 423 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVH-- 480
Query: 187 PPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
PP+ + + L C A + + + Y+W + V + + + + DG LL I
Sbjct: 481 PPEDHVVIKGTMATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-I 536
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGA 303
+ D G+Y C + S G S + V P P + H + + W
Sbjct: 537 SQTWSGDIGDYTCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSWVRPF 596
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
PI +Y I+ + NS W V +G E+ T + L P TY+F+V A
Sbjct: 597 DGNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCA 647
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
NE+G G+ S+ + + P + P P I G + + W+P P + N Y
Sbjct: 648 VNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYI 707
Query: 424 IFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+ +R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 708 LRYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 763
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 106/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 211 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 260
Query: 63 MYQCRAKNQLKTRYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A L + + A+ + +T P F P ES A V I C P P
Sbjct: 261 LYVCEAA-LLGSAFEPARAKAFLFITEPPYFTAEP-ESRISAEVEETVDIRCQAMGVPLP 318
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 319 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 378
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 379 NIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 434
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 435 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 472
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1802 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1855
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A NE+GYGEPSSPS + + P+
Sbjct: 1856 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1906
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 109/292 (37%), Gaps = 46/292 (15%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+G L + + + +Y I +++ L D Y+C
Sbjct: 24 LVLTCLAEGSWPLEFKWMRDGRELTTYS----SEYKYIIP----SLQKL----DAGFYRC 71
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + SF G + + + P+P+ W
Sbjct: 72 VVRNRMGALLQRKSEVQVAYMG---SFTDTDQRKTVPQGRAAILNLLPI-TSYPRPQVTW 127
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----- 178
++G+ I R I L+I + D+G Y A N + I L
Sbjct: 128 FREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSIARDI 187
Query: 179 ------GPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
P+ +PP + +A L C A + D++ W NGVRI
Sbjct: 188 GTPETTAPTIV--VPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI------- 238
Query: 231 LETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 279
T ++ G L I+N + AD G Y C ++ S K + + PP
Sbjct: 239 --TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPARAKAFLFITEPP 288
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1387 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACIVDR-- 1444
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1445 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1494
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 444
+ I W+P E N Y+I++R+ + + +++TLK +
Sbjct: 1495 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKT 1554
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1555 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1597
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1575 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1633
Query: 417 APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI++ +NDTE + L E VVR+ + +TEY V + A N G
Sbjct: 1634 GNIQGYKIYYWEADSQNDTEKMKVLFLPE------PVVRLKNLTSHTEYLVSISAFNAAG 1687
Query: 473 PGPESE 478
GP S+
Sbjct: 1688 DGPRSD 1693
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 39/231 (16%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 959 TSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG------ 1012
Query: 326 NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1013 -----AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRV 1067
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 435
T P AP+ + L + W PLP + N ++ Y+I +WR ++ Q
Sbjct: 1068 IQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SDLQ 1123
Query: 436 SETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
S L + + R+ EF + EYE+++QA N VG GP SEVV
Sbjct: 1124 SSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVV 1169
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 22/240 (9%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1252 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1311
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1312 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1363
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1364 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1422
Query: 431 DTEFQ--SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
E+Q S ++ I P +T Y+++++A ND+G E+E VT D
Sbjct: 1423 RGEWQTYSSSISHEATACIVDRLRP----FTSYKLRLKATNDIGDSDFSSETEAVTTLQD 1478
>gi|410902571|ref|XP_003964767.1| PREDICTED: protein sidekick-2-like [Takifugu rubripes]
Length = 2173
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 199/485 (41%), Gaps = 41/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+A G P W+++ ++ +P RY + L I L P+ D M+QC A+
Sbjct: 311 CQARGTPQPDIVWYKDAVPISPVKIP-----RYRVLVGGSLQINGLLPD-DTGMFQCFAR 364
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L V ++ P+ P +S +G +V + C AP+P W+K +
Sbjct: 365 NLAGEIQTNTYLAVTSIAPNITAGPADSAVI--DGTSVILHCETSGAPRPAITWQKGERV 422
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LLISP D+G Y+C A+N G+DE+ L+V + +
Sbjct: 423 LASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMASNSRGIDEASADLLVW-ARTRITK 481
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + V ++W +G I D+N +P + +D G L
Sbjct: 482 PPQDQSVIKGTKAVMTCGVTRDPSVTVRHVWEKSGSAI---DVNT--SPRLRLDPDGTLH 536
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P V K + + W
Sbjct: 537 ISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPIAVLSATEKRAINLTWAQA 596
Query: 303 ATNGRPITHYKIIARTN---WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
P+ Y + N W N+ G V L+P +Y+F
Sbjct: 597 FDGNSPLIRYILEVSENNAPWTVLLANIEPESTGVTV------------GGLIPARSYQF 644
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
++ A N++G G+ S + + P + P P + G + I W+P P QN P
Sbjct: 645 RLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPL 704
Query: 420 IYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y I + + Q +K N + + +T YE++V A N G G S
Sbjct: 705 QGYIIRYCLSGLPVDCQ---MKNITNPDQTSLLLEDLIIWTNYEIEVAAYNGAGRGTYSH 761
Query: 479 VVTIW 483
VT W
Sbjct: 762 KVTEW 766
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 38/234 (16%)
Query: 265 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
G++S T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 958 GQLSAST--ISSGVPPELPGPPTNLAISNIGPCSVTLQYKPGYDGKTSISRWVVEAQIGV 1015
Query: 321 ---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLV--PWSTYEFKVIAGNELGYGEPSSP 375
N W V H + E D A + VL P++ Y F++ N +G PS P
Sbjct: 1016 IGENEEWLLV--HQLSNEPD-------ARVLEVLDLNPYTFYRFRMRQVNIVGTSPPSQP 1066
Query: 376 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA-PNI--YYKIFWRKKNDT 432
S + T P +P+ + L + W PLP + N P++ Y +W+ +
Sbjct: 1067 SRKIETLPAPPDVSPANVTLRTASETSLWLRWVPLPEWEYNGNPDLVGYRVQYWKAGSKG 1126
Query: 433 EFQSETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
S + + R+ EF +TEYEV+VQAIN +G GP S+ V
Sbjct: 1127 GVLSHVIMD---------RLEREFTIEDLEEWTEYEVRVQAINGIGSGPWSQPV 1171
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 23/269 (8%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
N+A + A + ++ +W ++G ++N+ R F + V+++ ++ D
Sbjct: 212 NEAIMECVANARPLVKMSITWRKDGVMVNTGI-------RDFGRRLVISLPMVS---DSG 261
Query: 63 MYQCRAKNQLKTR---YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y+C A + + + A L VL P F K P S A V I C P+P
Sbjct: 262 YYECEASLRSSSAPPVSAGAFLHVLEY-PLFVKEP-PSHISAEMEKVVDIPCQARGTPQP 319
Query: 120 KFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
VW KD I R ++ G+L I+ + DD+G++ C A N+ G ++ L V
Sbjct: 320 DIVWYKDAVPISPVKIPRYRVLVGGSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAVT 379
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P + ++ L C T A W G R+ + ++ P
Sbjct: 380 SIAPNITAGPADSAVIDGTSVILHC--ETSGAPRPAITW-QKGERV--LASGSVQLPRFT 434
Query: 238 -IDGGLLEITNASFADAGEYECVVKSTVG 265
++ G L I+ + +DAG Y C+ ++ G
Sbjct: 435 LLESGSLLISPSHLSDAGTYTCMASNSRG 463
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + + T+ WT G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1814 ISRYGAALTLHWTSGDQGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTLNLDMLR 1872
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
E + TY+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1873 EGL-----TYDFRVIAVNDYGYGTPSAPSPSISAQKVSPF 1907
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 51/272 (18%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM--- 63
L TC A G + + W NG L +L RYL P D A
Sbjct: 25 LVLTCMAEGSWPLEFKWLYNGSELTRFSL---------------EYRYLIPSLDRAHAGN 69
Query: 64 YQCRAKNQLKTRYSSAQLRVLT-LKPSFKKRPLE---SETYAGEGGNVTIFCNPEAAPKP 119
Y+C +N++ A ++V T ++ ++ +E S+T + G + + + P+P
Sbjct: 70 YRCIVRNRV-----GAIMQVTTEVQVAYMGGFVEGERSQTVSQGDGALIKAPHIHSFPRP 124
Query: 120 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH- 178
+ W +DG I S R I + L+I D+G Y A N + + +VL
Sbjct: 125 QITWFRDGRKIPSSSRIAITLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPVVLTV 184
Query: 179 ----GPSYYEQLPPKITIAAH-------RNLQ-LRCSAHTEELLDVAYIWTHNGVRIGNM 226
GP+ + + P I I+ RN + C A+ L+ ++ W +GV + N
Sbjct: 185 ENVGGPA--DPIAPSIIISPKNTSVTMGRNEAIMECVANARPLVKMSITWRKDGVMV-NT 241
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYEC 258
+ + G L I+ +D+G YEC
Sbjct: 242 GIRDF--------GRRLVISLPMVSDSGYYEC 265
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 27/208 (12%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
EV + W G+ P+ +Y + +R ++ W V + E Y I
Sbjct: 1393 EVQARRVLLSWEPGSDGLSPVRYYTVQSRELPDNNW-TVHSASVSHETHSY-------IV 1444
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+++Y+F+V A N++G E S S T D P +AP+ + + + W+
Sbjct: 1445 TRLKPFTSYQFRVKATNDIGDSEYSQESETITTLQDAPDRAPTILSVTPHTTTSVLVRWQ 1504
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN--------VGIAVVRIPSEFYYTE 460
P + N + +++ +R+ + ++ T++ + + VR SE T+
Sbjct: 1505 PPSEDHINGVLLGFRVRYRELHYDRLRTFTVRTVNSPSSHWADLTALYSVRNLSESSLTQ 1564
Query: 461 -----------YEVKVQAINDVGPGPES 477
YE+++ N VG GP S
Sbjct: 1565 YELDNLSKHKRYEIRLSVYNAVGEGPIS 1592
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G S+P + A P P + L + W+P P + QN
Sbjct: 1576 YEIRLSVYNAVGEGPISAPQEVFVGEA-VPTSPPLNVMVQSSTATQLDVMWDPPPLDAQN 1634
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YK+ FW + +N+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1635 GDIQGYKVYFWEYQLRNETERLRTLFLPELG------VKLKNLTGYTTYMISVAAFNAAG 1688
Query: 473 PGPES 477
GP S
Sbjct: 1689 DGPRS 1693
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 277 GPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRP-ITHYKIIARTNWNS-TWFNVSEH 330
PP + P V + +TS ++W + NG P + Y++ W + + V H
Sbjct: 1075 APPDVSPANVTLRTASETSLWLRWVPLPEWEYNGNPDLVGYRV---QYWKAGSKGGVLSH 1131
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
VI ++R E +IE+ L W+ YE +V A N +G G S P Q T P P
Sbjct: 1132 VIMDRLER-----EFTIED-LEEWTEYEVRVQAINGIGSGPWSQPV-QGRTRESVPTSGP 1184
Query: 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 450
+ + + + W + +N + YK+ +++K D++ GN + V
Sbjct: 1185 ANVSAFATTSSSILVRWGEVLHTDRNGLILGYKVVYKEK-DSDTAPGFWSVEGNTSHS-V 1242
Query: 451 RIPSEFYYTEYEVKVQAINDVGPGPES 477
++ Y YE++V A +G G S
Sbjct: 1243 QLTGLGKYVLYEIQVLAFTRIGDGRSS 1269
>gi|427796129|gb|JAA63516.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
pulchellus]
Length = 808
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 169/361 (46%), Gaps = 22/361 (6%)
Query: 115 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
AP+P+ W K+ + +GGR ++ ++G+L I + D G Y+C A+N G + G L
Sbjct: 4 GAPRPEVKWMKEAQEL-TGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSL 62
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
V G + Q P +AA ++ RC+A + L++ W NG + E +
Sbjct: 63 EV-KGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDP----EADAR 117
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+ L IT D+G Y CV ++ + + T+ V+ P P V++ +
Sbjct: 118 MVQAGDNSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVKI-DCDGLM 176
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
A ++W PI Y I T+++ TW + ++ + + + P
Sbjct: 177 ALVEWKPTGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT---------KFKVSMSP 227
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
W+ Y F+V+A N++G PS S + TP D P++ P R+ G G + +L I+W P+P
Sbjct: 228 WANYTFRVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPI 287
Query: 414 KQNAPNIYYKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ NAP +YK+ W++ + D + S ++++ P+ + Y +KV+A N
Sbjct: 288 EHNAPGFFYKVLWKRDDIPDATWNSRIIEDWKQNRHVEYGQPT---FKPYRIKVEAHNRR 344
Query: 472 G 472
G
Sbjct: 345 G 345
>gi|348525294|ref|XP_003450157.1| PREDICTED: protein sidekick-2-like [Oreochromis niloticus]
Length = 2209
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 200/485 (41%), Gaps = 41/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+A G P W+++ ++ +P RY + L I L P+ D M+QC A+
Sbjct: 342 CQARGTPQPEIVWYKDAVPISPVKIP-----RYRVLVGGSLQINGLLPD-DTGMFQCFAR 395
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L V ++ P+ P S++ +G +V + C AP+P W+K +
Sbjct: 396 NLAGEIQTNTYLAVTSIAPNITAGP--SDSAVIDGMSVILHCETSGAPRPAITWQKGERV 453
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LLISP D+G Y+C A+N G+DE+ L+V + +
Sbjct: 454 LASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMASNSRGIDEASADLLVW-ARTRITK 512
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + + V ++W +G I D+N +P + +D G L
Sbjct: 513 PPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWEKSGTVI---DVNT--SPRLRLDPDGTLH 567
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P V K + + W
Sbjct: 568 ISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPIAVLSTTEKRAINLTWAQA 627
Query: 303 ATNGRPITHYKIIARTN---WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
P+ Y + N W N+ G V L+P +Y+F
Sbjct: 628 FDGNSPLIRYILEVSENNAPWTVLLANIEPESTGVTV------------GGLIPARSYQF 675
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
++ A N++G G+ S + + P + P P + G + I W+P P QN P
Sbjct: 676 RLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPL 735
Query: 420 IYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y I + + Q +K N + + +T YE++V A N G G S
Sbjct: 736 QGYIIRYCLSGLPVDCQ---MKNITNPDQTSLLLEDLIIWTNYEIEVAAYNGAGRGTYSH 792
Query: 479 VVTIW 483
VT W
Sbjct: 793 KVTEW 797
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 23/269 (8%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
N+A + A + ++ +W ++G ++N+ R F + V+++ ++ D
Sbjct: 243 NEAIMECVANARPLVKMSITWRKDGAVVNTGI-------RDFGRRLVISLPAVS---DSG 292
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y+C A + + + + A L VL P F K P S A V I C P+P
Sbjct: 293 YYECEASLRSSSVPSVTAGAYLHVLEY-PLFVKEP-PSHISAEMEKVVDIPCQARGTPQP 350
Query: 120 KFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
+ VW KD I R ++ G+L I+ + DD+G++ C A N+ G ++ L V
Sbjct: 351 EIVWYKDAVPISPVKIPRYRVLVGGSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAVT 410
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P + ++ L C T A W G R+ + ++ P
Sbjct: 411 SIAPNITAGPSDSAVIDGMSVILHC--ETSGAPRPAITW-QKGERV--LASGSVQLPRFT 465
Query: 238 -IDGGLLEITNASFADAGEYECVVKSTVG 265
++ G L I+ + +DAG Y C+ ++ G
Sbjct: 466 LLESGSLLISPSHLSDAGTYTCMASNSRG 494
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 265 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
G++S T I G PP LPG + + + S T+Q+ G I+ +++ A+
Sbjct: 989 GQLSAST--ISSGVPPELPGPPTNLAISNIGPRSVTLQFKPGYDGKTSISRWQVEAQIGI 1046
Query: 321 ---NSTWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPS 376
N W V + + E D S+E + L P++ Y F++ N +G PS PS
Sbjct: 1047 IGENEEWLMVQQ--LANEPD------ARSLEVLDLNPYTYYRFRMRQVNIVGTSPPSQPS 1098
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA-PNIY-YKIFWRKKNDTEF 434
+ T P AP+ + L + W PLP + N P++ Y+I + K
Sbjct: 1099 RKIQTLQAPPDIAPANVTLRTASETSLWLRWVPLPEWEYNGNPDLVGYRIQYAKAGTK-- 1156
Query: 435 QSETLKEYGNVGIAVV--RIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
G V V+ R+ EF +TEYEV+VQAIN +G GP S+ V
Sbjct: 1157 --------GGVLSHVIMDRLEREFTIEDLEEWTEYEVRVQAINGIGSGPWSQPV 1202
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
EV + W G+ P+ +Y + R +S W V + E + Y I
Sbjct: 1424 EVQARRVLLSWEPGSDGLSPVRYYTVQYRELPDSNW-TVHSASVSHETNSY-------IV 1475
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L P+++Y+F+V A N++G E S S T D P +AP+ + + + W+
Sbjct: 1476 DRLKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDKAPTILSVTPHTTTSVLVRWQ 1535
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN--------VGIAVVRIPSEFYYTE 460
P P + N + +++ +R+ + +S T++ + VR SE T+
Sbjct: 1536 PPPEDHINGVLLGFRVRYRELHYDRVRSFTVRTVNSPSTNWADLTAPYSVRNLSESSLTQ 1595
Query: 461 -----------YEVKVQAINDVGPGPES 477
YE+++ N VG GP S
Sbjct: 1596 YELDNLSKHKRYEIRLSVYNAVGEGPSS 1623
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 95/266 (35%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD---PAM 63
L TC A G + + W NG L +L RYL P D
Sbjct: 56 LVLTCMAEGSWPLEFKWIYNGTELTRFSL---------------EYRYLIPSLDRSHAGH 100
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
Y+C +N++ + + F + GEG + + P+P+ W
Sbjct: 101 YRCIVRNRVGAIMQCSTEVQVAYMGGFVEGERSQTVSQGEGALIRA-PRIHSFPRPQITW 159
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----- 178
+DG I S R I + L+I D+G Y A N + + I L
Sbjct: 160 FRDGRKIPSSSRIAIALDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPITLTVENVG 219
Query: 179 GPS-----YYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
GP+ P ++ RN + C A+ L+ ++ W +G + N + +
Sbjct: 220 GPADPIAPSIIIPPKNTSVTVGRNEAIMECVANARPLVKMSITWRKDGAVV-NTGIRDF- 277
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
G L I+ + +D+G YEC
Sbjct: 278 -------GRRLVISLPAVSDSGYYEC 296
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 99/251 (39%), Gaps = 29/251 (11%)
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L EI +F G+ C S + + ++ PG P G+ EV TS + W
Sbjct: 1283 LYEIQVLAFTRIGDGRCSSPSILERT-------LDDVPGPPVGILFPEVRTTSVRLIWQP 1335
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
A I Y+I R N +S + V+ +YT L P Y F++
Sbjct: 1336 PAQPNGIILAYQITFRRN-SSNSNAATVDVLSPSARQYTAAG-------LKPEMVYVFRL 1387
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGGGGKIGDLSISWEPLPREKQNAPN 419
A G+GE + +P Q SR + + + +SWE P +P
Sbjct: 1388 TAQTRKGWGEAAEALVVTTEKRARP-QPTSRPTVPQEEVQARRVLLSWE--PGSDGLSPV 1444
Query: 420 IYYKIFWRKKNDTEF--QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---G 474
YY + +R+ D+ + S ++ N I P +T Y+ +V+A ND+G
Sbjct: 1445 RYYTVQYRELPDSNWTVHSASVSHETNSYIVDRLKP----FTSYQFRVKATNDIGDSEYS 1500
Query: 475 PESEVVTIWHD 485
ESE +T D
Sbjct: 1501 EESEAITTLQD 1511
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G S+P + A P P + L ++W+P P + QN
Sbjct: 1607 YEIRLSVYNAVGEGPSSAPQEVFVGEA-VPTAPPQNVVVQSSTATQLDVTWDPPPLDAQN 1665
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW + +N+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1666 GDIQGYKIYFWEFQLQNETERLRTLFLPELG------VKLKNLTGYTTYMISVAAFNAAG 1719
Query: 473 PGPES 477
GP S
Sbjct: 1720 DGPRS 1724
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + T+ T+ WT G PIT Y I AR + W ++ I +EV YT +
Sbjct: 1845 ISRYGTALTLHWTSGDQGRAPITRYVIEARPSDEGLW-DILIKDIPREVTSYTLNMDMLR 1903
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPS 373
E V TY+F+VIA N+ GYG PS
Sbjct: 1904 EGV-----TYDFRVIAVNDYGYGSPS 1924
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRP-ITHYKIIARTNWNSTWFNVSE 329
++ PP + P V + +TS ++W + NG P + Y+I + T V
Sbjct: 1104 LQAPPDIAPANVTLRTASETSLWLRWVPLPEWEYNGNPDLVGYRI--QYAKAGTKGGVLS 1161
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
HVI ++R E +IE+ L W+ YE +V A N +G G S P T P
Sbjct: 1162 HVIMDRLER-----EFTIED-LEEWTEYEVRVQAINGIGSGPWSQPV-HCRTRESVPSSG 1214
Query: 390 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 449
P+ + + + W + +N + YK+ +++K D++ + GN +
Sbjct: 1215 PTNVSAFATTSSSILVRWGEVQETDRNGLILGYKVVYKEK-DSDTAPDFWTVEGNTSHS- 1272
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPG 474
V++ Y YE++V A +G G
Sbjct: 1273 VQLTGLGKYVLYEIQVLAFTRIGDG 1297
>gi|351712766|gb|EHB15685.1| Neuronal cell adhesion molecule, partial [Heterocephalus glaber]
Length = 843
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 206/485 (42%), Gaps = 45/485 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 80 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRRIDGD---TIIFSNVQERSSAVY 133
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE-TYAGEGGNVTIF--CNPEAAPKPKF 121
QC A N+ ++A + VL P R L SE T N F C +P P
Sbjct: 134 QCNASNEYGYLLANAFVNVLAEPP----RILTSENTLYQVIANRPAFLDCAFFGSPLPTI 189
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS I+ ENG L I ++ +G Y+C A N G+ +++ L +
Sbjct: 190 EWFKGAK--GSALHEDIYVLHENGTLEIPVAPKNSTGTYTCVARNKLGIAKNEVHLEI-K 246
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P+ + P + + C + L W + G + +E +
Sbjct: 247 DPTRILKQPEYAVVQRGSTVTFECKVKHDHTLIATVTWLKDN---GELPSDE----RFTV 299
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
D L +T+ D G Y CV +T+ +S + V P P +++ S +
Sbjct: 300 DKDHLVVTDVRDNDGGTYTCVANTTLDDVSASAELSVVDVPNPPFDLELTNQLDKSVQLS 359
Query: 299 WTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
WT G N PIT + I + + W + +E + + + L P
Sbjct: 360 WTPGDDNNSPITKFIIEYEDAMHESGLWRHQAE----------VSGTQTTAQLKLSPHVN 409
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+PL + N
Sbjct: 410 YSFRVMAENSIGRSLPSEGSEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGFESN 469
Query: 417 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG P
Sbjct: 470 GPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAP 524
Query: 476 ESEVV 480
E VV
Sbjct: 525 EPAVV 529
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 102/257 (39%), Gaps = 33/257 (12%)
Query: 34 TLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 92
TLP +R F ++ T++ + E D YQC AKN L + + + V P +
Sbjct: 13 TLP---TNRTFYRNFKKTLQIIQVSEADSGNYQCIAKNALGAIHHTISVTV-KAAPYWIM 68
Query: 93 RPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPV 149
P GE G T+ C PKP+ W +G I R+I + ++ S V
Sbjct: 69 APQNLVLSPGEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRRI-DGDTIIFSNV 125
Query: 150 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLR 201
S +Y C A+N +G + + VL PP+I + A+R L
Sbjct: 126 QERSSAVYQCNASNEYGYLLANAFVNVL-------AEPPRILTSENTLYQVIANRPAFLD 178
Query: 202 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261
C+ L + + G + + D+ L + G LEI A G Y CV +
Sbjct: 179 CAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------ENGTLEIPVAPKNSTGTYTCVAR 231
Query: 262 STVGKISTKTTVIVEGP 278
+ +G + + ++ P
Sbjct: 232 NKLGIAKNEVHLEIKDP 248
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 13/166 (7%)
Query: 117 PKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
P P W K+DG + + + F+ L I VS DSG Y C A N G +
Sbjct: 1 PTPIIYWIKEDGTLPTNRTFYRNFKK-TLQIIQVSEADSGNYQCIAKNALGAIHHTISVT 59
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL--ET 233
V P Y+ P + ++ + L C A+ ++ W NGV I E+ +
Sbjct: 60 VKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVPI------EIAPDD 110
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P+ IDG + +N + Y+C + G + V V P
Sbjct: 111 PSRRIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 156
>gi|380806199|gb|AFE74975.1| contactin-4 isoform c, partial [Macaca mulatta]
Length = 261
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 131/267 (49%), Gaps = 7/267 (2%)
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
TN G S G L+V P+ P + + ++ L C + LD+ + W+ NG
Sbjct: 1 TNHFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGH 59
Query: 222 RIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 280
I + D + E G L I N AG+Y C+V+++V ++S +IV GPPG
Sbjct: 60 LIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPG 119
Query: 281 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 340
P V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D
Sbjct: 120 PPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID--- 174
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
G+ + L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG
Sbjct: 175 GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSK 234
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWR 427
+L I+WE +P E QN Y + +R
Sbjct: 235 SELVITWETVPEELQNGRGFGYVVAFR 261
>gi|410918979|ref|XP_003972962.1| PREDICTED: neuronal cell adhesion molecule-like [Takifugu rubripes]
Length = 1211
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 202/485 (41%), Gaps = 45/485 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C G P +WF NG ++ E P ED R D V T+ + A+YQC A N
Sbjct: 377 CRVGGEPKPKITWFVNG--VSIENAP-EDLRRKVDGDTV-TLSSVQ-SGSSAVYQCNASN 431
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKD-GN 128
+ ++A + VL P P + Y N + C +P P W KD
Sbjct: 432 EFGYLMANAFVNVLAEAPRILTPP--NRVYQVITNNPALLHCASFGSPIPVITWFKDIQT 489
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I G I ENG L I +SG Y+C ATN G+ E+ L V P+ + P
Sbjct: 490 SIKDGDPYVIHENGTLEIHVAQPLNSGKYTCIATNNLGIKENHVFLEVKE-PTRILKQPE 548
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ C+ + L W + G + +E +D L I +
Sbjct: 549 YKVVQRGMRAAFECTVKHDPTLIPTMTWLKDS---GELPDDE----RFVVDADTLTIMDV 601
Query: 249 SFADAGEYECVVKSTVGKIS----------TKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
+ D G Y CV+ +T+ S T T IV P P +++ + + +
Sbjct: 602 TDRDKGTYTCVMNTTLDHDSASAVLTVVEATPTPAIVYERPDPPTDLEMTDQTERGVRLT 661
Query: 299 WTDGATNGRPITHYKIIAR--TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
W G + P + I + W N++E VD + +++ L P
Sbjct: 662 WIPGDEHNSPTQKFLIQYEDLLHQPGVWTNLTE------VDGTS----TTVQLSLSPHVY 711
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F+V+A N LGY +PS PS QY T P + P+ + G G G+L ISW PL + N
Sbjct: 712 YSFRVLAMNRLGYSKPSQPSNQYRTNPAAPDENPADVKGIGTGPGNLVISWTPLTGFQSN 771
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGP 475
P + Y++ WR+ N S K NV VV P+ Y YE++VQAIND G GP
Sbjct: 772 GPGLEYRVQWRQLNAGGDWS--TKNVANVSQFVVSGTPT---YVSYEIRVQAINDYGSGP 826
Query: 476 ESEVV 480
E E V
Sbjct: 827 EPETV 831
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 110/273 (40%), Gaps = 27/273 (9%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G + + C E P P W+KDG + SG L IS V D+G Y CTATN
Sbjct: 280 GETLELECIAEGLPTPDISWQKDGGELPSGRVSFQTFQKTLKISDVVEADAGDYRCTATN 339
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G ++ V P ++ P + +A + L C E + W NGV I
Sbjct: 340 RLGSTHHIIKVTVKAAP-FWISAPRNLILAPNETGVLMCRVGGEPKPKIT--WFVNGVSI 396
Query: 224 GNM--DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 279
N DL +DG + +++ + Y+C + G + V+ E P
Sbjct: 397 ENAPEDLRR------KVDGDTVTLSSVQSGSSAVYQCNASNEFGYLMANAFVNVLAEAPR 450
Query: 280 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 339
L +V +V + + A+ G PI +I TWF + I K+ D Y
Sbjct: 451 ILTPPNRVYQVITNNPAL--LHCASFGSPI---PVI-------TWFKDIQTSI-KDGDPY 497
Query: 340 TGRKEASIE-NVLVPWSTYEFKVIAGNELGYGE 371
+ ++E +V P ++ ++ IA N LG E
Sbjct: 498 VIHENGTLEIHVAQPLNSGKYTCIATNNLGIKE 530
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 109/516 (21%), Positives = 180/516 (34%), Gaps = 97/516 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
C +FG P +WF++ + ++D D Y I +N L I P + Y C A
Sbjct: 471 CASFGSPIPVITWFKDIQT------SIKDGDPYVIHENGTLEIHVAQP-LNSGKYTCIAT 523
Query: 70 NQLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFV 122
N L + + L V + +P +K G C + P P
Sbjct: 524 NNLGIKENHVFLEVKEPTRILKQPEYK--------VVQRGMRAAFECTVKHDPTLIPTMT 575
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG--- 179
W KD + R + + L I V+ D G Y+C D + L V+
Sbjct: 576 WLKDSGEL-PDDERFVVDADTLTIMDVTDRDKGTYTCVMNTTLDHDSASAVLTVVEATPT 634
Query: 180 PS-YYEQLPP----KITIAAHRNLQL-------------RCSAHTEELLDVAYIWTHNGV 221
P+ YE+ P ++T R ++L + E+LL +WT+
Sbjct: 635 PAIVYERPDPPTDLEMTDQTERGVRLTWIPGDEHNSPTQKFLIQYEDLLHQPGVWTNLTE 694
Query: 222 RIGNMDLNELE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 280
G +L +P++ +L + + S + S + P
Sbjct: 695 VDGTSTTVQLSLSPHVYYSFRVLAMNRLGY-----------SKPSQPSNQYRTNPAAPDE 743
Query: 281 LPGGVQVVEVHKTSATIQWT--DGATNGRPITHYKIIART-NWNSTW-----FNVSEHVI 332
P V+ + + I WT G + P Y++ R N W NVS+ V+
Sbjct: 744 NPADVKGIGTGPGNLVISWTPLTGFQSNGPGLEYRVQWRQLNAGGDWSTKNVANVSQFVV 803
Query: 333 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKPYQA 389
+ +YE +V A N+ G G P P+ + D P A
Sbjct: 804 SGTPT----------------YVSYEIRVQAINDYGSG----PEPETVIGYSGEDLPLSA 843
Query: 390 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-------FQSETLKEY 442
P + + WEP+PR YK+++R++ Q + L
Sbjct: 844 PKGVQVKVPNSTFAEVHWEPVPRSSVRGKLQGYKVYYRRQRGLHETEPEEEPQEQVLTFS 903
Query: 443 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
GN R+P Y+ Y + ++ N+ G GP S+
Sbjct: 904 GNRSEG--RLPGLQPYSVYNLSIRVFNNKGEGPPSQ 937
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 115/319 (36%), Gaps = 56/319 (17%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN----VLTIRYLN 56
D + ++ CEA G P ++SW RNG + +E + ++ V+ I
Sbjct: 54 FDPRENIVIHCEAKGKPHPSFSWTRNGTHFD-----VEKDSKVLMKPGSGTLVIDISGEK 108
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
E YQC A N T S+ + + P + K E+ +G ++ + C P A
Sbjct: 109 AEAYEGTYQCTAHNDHGTALSNKIVIRQSRSPLWSKERNEA-VVVQKGVSLVLQCRPPAG 167
Query: 117 PKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGI-YSCTATNVHGMDESKGR 173
P ++ D N +++ + NG+L S V +DS Y C A H + +
Sbjct: 168 LPPPVIFWMDNNFHRLPLDKRVSQALNGDLYFSNVLPEDSRPDYICYARFPHTQTIQQKQ 227
Query: 174 LIVL-----------------------------HGPSYYEQLPPKITIAAHR--NLQLRC 202
I L H P + + T R L+L C
Sbjct: 228 PISLNVLDMETVNETVAALYNITDFSRDNPEGDHQPGFMYPMGSTSTKMVLRGETLELEC 287
Query: 203 SAHTEELLDVAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
A D++ W +G + G + + L+I++ ADAG+Y C
Sbjct: 288 IAEGLPTPDIS--WQKDGGELPSGRVSFQTFQK--------TLKISDVVEADAGDYRCTA 337
Query: 261 KSTVGKISTKTTVIVEGPP 279
+ +G V V+ P
Sbjct: 338 TNRLGSTHHIIKVTVKAAP 356
>gi|8393820|ref|NP_059041.1| neural cell adhesion molecule L1 precursor [Rattus norvegicus]
gi|56741|emb|CAA41860.1| neural cell adhesion molecule L1 [Rattus norvegicus]
Length = 1255
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 208/479 (43%), Gaps = 38/479 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + + +Y I+ L + + P D + QC A+N
Sbjct: 353 CQVQGRPQPEVTWRINGMSIEK----VNKDQKYRIEQGSLILSNVQPS-DTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 408 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG+L I + +D+G Y C A N L V + P
Sbjct: 466 TVLQDERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQG--P 523
Query: 189 KITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEIT 246
+ TI + C A + L + W +G DL E ++ I+ G L I
Sbjct: 524 RSTIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGQLVIK 578
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGA 303
+ ++D G+Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 579 SLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAE 638
Query: 304 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 639 DHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRV 688
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I
Sbjct: 689 TAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQ 748
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y++ WR + ET KE V + + + + YE+KVQA+N+ G GPE +V
Sbjct: 749 YRVQWRPLG----KQETWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVT 802
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 186/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 259 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 367
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G I + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 368 NGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHG-------LLLANAYIYV 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 421 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 474
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 475 PYANGHLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRST-IEKKGAR 533
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 534 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGQLVIKSLDYSDQ 585
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
++ +A EL E + +P P+ S K + +SW P E N
Sbjct: 586 GDYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 641
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
+P Y I F K+ E K GN +++ Y Y +V AIN GPG
Sbjct: 642 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 698
Query: 475 --PESEVV 480
P SE V
Sbjct: 699 PSPVSETV 706
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 110/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 52 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 112 RCYASNNLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 171 MNSKILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S + + ++L L C A E W H
Sbjct: 231 TNSMIDRKPRLLFPTNSSSH------LVALQGQSLILECIA--EGFPTPTIKWLHPS--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 280 DPMPTDRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 332
>gi|330864743|ref|NP_001193491.1| neuronal cell adhesion molecule [Bos taurus]
Length = 1180
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 205/496 (41%), Gaps = 53/496 (10%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D T C A G P SW NG + E P +D R D ++ + ER A+
Sbjct: 356 EEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAV 410
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPK 120
YQC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 411 YQCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPT 466
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W K GS R I+ ENG L I +D +G Y+C A N GM ++ L +
Sbjct: 467 IEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI- 523
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P+ + P + + C + L +W + + N
Sbjct: 524 KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPNDG-------RFT 576
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQV 287
+D L + + + D G Y CV +T+ +S + V P P P +++
Sbjct: 577 VDKDRLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 345
+ S + WT G N PIT + I + W + +E V G +
Sbjct: 637 TDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE-VPGTQT--------- 686
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I
Sbjct: 687 TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVI 746
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 747 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 801
Query: 465 VQAINDVGPGPESEVV 480
VQA+ND G PE V
Sbjct: 802 VQALNDAGFAPEPAAV 817
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPSPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-IILRNGQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 I---VLHGPSYYEQLPPKITIAAHRN---------LQLRCSAHTEELLDVAYIWTHNGVR 222
I V+ S+ ++ P +T + + L L C A E L W
Sbjct: 234 ISVKVISAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECIA--EGLPTPIIYWIKED-- 289
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G + +N N L+I + AD+G Y+C+ K+ +G I +V V+ P
Sbjct: 290 -GTLPINRTFYRNFK---KTLQIVQVTEADSGNYQCIAKNALGAIHHTISVTVKAAP 342
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + N I K
Sbjct: 830 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 882
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 883 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 940
Query: 395 GGGGKIGDLSISWEP 409
+ L++ WEP
Sbjct: 941 IVNPTLDSLTLEWEP 955
>gi|355747487|gb|EHH51984.1| Protein sidekick-1, partial [Macaca fascicularis]
Length = 2035
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 202/480 (42%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 310 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 364
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP ++T +G + C APKP WK++ +I+
Sbjct: 365 EGGEIQTHTYLDVTNIAPVFTQRP--ADTTVTDGMTAILRCEVSGAPKPAITWKRENHIL 422
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 423 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNQTSIVHP- 481
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLLE 244
P + L C A + + + Y+W + N+ L T I + DG LL
Sbjct: 482 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKD-----NVALTPSSTSRIVVEKDGSLL- 535
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G+Y C + S G S + V P P + H + + W
Sbjct: 536 ISQTWSGDIGDYTCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSWVRP 595
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
PI +Y I+ + NS W V +G E+ T + L P TY+F+V
Sbjct: 596 FDGNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVC 646
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G G+ S+ + + P + P P I G + + W+P P + N Y
Sbjct: 647 AVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGY 706
Query: 423 KIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+ +R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 707 ILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 763
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 106/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 211 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 260
Query: 63 MYQCRAKNQLKTRYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A L + + A+ + +T P F P ES A V I C P P
Sbjct: 261 LYVCEAA-LLGSAFEPARAKAFLFITEPPYFTAEP-ESRISAEVEETVDIRCQAMGVPLP 318
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 319 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 378
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 379 NIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 434
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 435 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 472
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1802 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1855
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A NE+GYGEPSSPS + + P+
Sbjct: 1856 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1906
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 112/293 (38%), Gaps = 48/293 (16%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+G L + + + +Y I +++ L D Y+C
Sbjct: 24 LVLTCLAEGSWPLEFKWMRDGRELTTYS----SEYKYIIP----SLQKL----DAGFYRC 71
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFV 122
+N+ L R S Q+ + SF ++ +G + P + P+P+
Sbjct: 72 VVRNRMGALLQRKSEVQVAYMG---SFTD--MDQRKTVPQGRAAILNLLPITSYPRPQVT 126
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH---- 178
W ++G+ I R I L+I + D+G Y A N + I L
Sbjct: 127 WFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSIARD 186
Query: 179 -------GPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
P+ +PP + +A L C A + D++ W NGVRI
Sbjct: 187 IGTPETTAPTIV--VPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI------ 238
Query: 230 ELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 279
T ++ G L I+N + AD G Y C ++ S K + + PP
Sbjct: 239 ---TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPARAKAFLFITEPP 288
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 28/215 (13%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
EV S +QW G+ PI ++ + R W S + R+ A I
Sbjct: 1391 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSI------RHAA--TACIV 1442
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L P+++Y+ ++ A N++G + SS + T D P + P + + I W+
Sbjct: 1443 DRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQ 1502
Query: 409 PLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIAVVRI 452
P E N Y+I++R+ + + +++TLK + V +
Sbjct: 1503 PPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTST 1562
Query: 453 PSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
E Y YEV + A N +G P S V ++
Sbjct: 1563 MCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1597
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1575 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1633
Query: 417 APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI++ +NDTE + L E VVR+ + +TEY V + A N G
Sbjct: 1634 GNIQGYKIYYWEADSQNDTEKMKVLFLPE------PVVRLKNLTSHTEYLVSISAFNAAG 1687
Query: 473 PGPESE 478
GP S+
Sbjct: 1688 DGPRSD 1693
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 314
V + + T +T+ PP LPG + + + SAT+Q+ G I+ + +
Sbjct: 948 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1007
Query: 315 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 367
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1008 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1056
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 424
G S S T P AP+ + L + W PLP + N ++ Y+I
Sbjct: 1057 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1116
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 478
+WR ++ QS L + + R+ EF + EYE+++QA N VG GP SE
Sbjct: 1117 YWR----SDLQSSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1167
Query: 479 VV 480
VV
Sbjct: 1168 VV 1169
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 18/212 (8%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P + EV TS I W I Y+I R +S+ + +G V +
Sbjct: 1280 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLA-SSSPHTFTTVEVGATVRQ 1338
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+T L P S Y F++ A G+GEP + ++P P +
Sbjct: 1339 FTATD-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQA 1390
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ--SETLKEYGNVGIAVVRIPSEF 456
++ S+ + +P +P Y+ + R+ E+Q S +++ I P
Sbjct: 1391 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSIRHAATACIVDRLRP--- 1447
Query: 457 YYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
+T Y+++++A ND+G E+E VT D
Sbjct: 1448 -FTSYKLRLKATNDIGDSDFSSETEAVTTLQD 1478
>gi|224070363|ref|XP_002190771.1| PREDICTED: protein sidekick-1 [Taeniopygia guttata]
Length = 2194
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 200/489 (40%), Gaps = 39/489 (7%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D+ C+A GVP T W+++ L+ LE+ + L I L P+ D +
Sbjct: 376 EKDVDILCQAMGVPIPTLVWYKDSVPLSR----LENPRYKVLLSGGLRIHALRPQ-DAGI 430
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+QC A NQ ++ L V +KP+F + P +T EG + C AP+P W
Sbjct: 431 FQCFASNQAGEIHTYTYLDVTNIKPAFIQPP--EDTTVTEGMTAVLTCEVSGAPRPAISW 488
Query: 124 KKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
KK I+ SG R + E+G L I+PV D+G Y+C A N G + L V +
Sbjct: 489 KKGEQILASGSVQIPRFVLLESGGLQIAPVFLQDAGNYTCCAANSEGALNAFVMLTVWNR 548
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
S P T+ LRC A + + + Y+W + I + + + D
Sbjct: 549 TSIVHP-PEDSTVIKGTTATLRCEATHDPRISIRYLWKKDSAVINPSSSSRI---TVEKD 604
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATI 297
G LL I+ D G+Y C V S+ G S + V P P + + S +
Sbjct: 605 GTLL-ISQTWSGDIGDYTCEVVSSGGNDSRTARLEVIELPHSPQNLVATLNSSYSRSVVL 663
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTW----FNVSEHVIGKEVDRYTGRKEASIENVLVP 353
W P+ +Y + N NS W N+ + G V L P
Sbjct: 664 SWVRPFDGNSPVLYYVVELSEN-NSPWKVHLSNLDPKMTGVTVSG------------LTP 710
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
TY+F+V A N++G G S+ + + P + P P I G + + W+P P
Sbjct: 711 ARTYQFRVCAVNQVGKGRYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPES 770
Query: 414 KQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N Y + +R E+Q K + I + +T+YE++V + N G
Sbjct: 771 EHNGVLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLVKDLIIWTQYEIQVASYNGAG 827
Query: 473 PGPESEVVT 481
G S VT
Sbjct: 828 LGAFSRPVT 836
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 274 IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
I GP G PG Q + V K+++ T+QWT+G + +P T Y I AR + W
Sbjct: 1869 ITAGPAEGSPGSPQEILVTKSASGLTLQWTEGDSGEKPTTGYIIEARPSDEGLW-----D 1923
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ K++ R + L TYEF+V+A NE GYGEPS PS + + P+
Sbjct: 1924 MFVKDIPRSATSYTVVGLDKLRQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPF 1980
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 110/306 (35%), Gaps = 45/306 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I D YQC
Sbjct: 97 LVLTCLAEGSWPLEFKWLHN----DSEITSYSSEYKYIIP--------ALQRADAGFYQC 144
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R +E A V F + + P+P+ W
Sbjct: 145 VVRNRMGALLQRRSQVQVAYMGDFMGTDQRKTVTEGQAA----VLNFPHILSHPRPQVTW 200
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+DG+ I R I L+I VS D+G Y A N + I L
Sbjct: 201 FRDGHKIIPSSRIAITLENQLVILGVSETDAGGYYVQAVNEKNGENKTSPFIHLSVARAS 260
Query: 184 EQ---------LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ P T +A L C A+ L ++ W NG++I
Sbjct: 261 SPPASAAPAMVIRPHNTSVVAGSSEATLECVANARPLERLSVTWKRNGIKI--------- 311
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL---PGGVQ 286
T I+ G L ITN + AD G Y C K ST K + + PP P V
Sbjct: 312 TSGISSFGRRLTITNPTSADVGMYFCEAKLRESTEEPARAKAFLSILEPPYFTAEPQNVI 371
Query: 287 VVEVHK 292
+ EV K
Sbjct: 372 LAEVEK 377
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 23/254 (9%)
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI--VEGPPGL-PGGVQVVEVHKT 293
D +LE+ N + + + VG +S + VI ++ PP + PG V V +T
Sbjct: 1104 DAQMLEVPNLTPYTHYRFRMRQVNVVGPSPLSQPSRVIQTLQAPPDVAPGSVTVRTASET 1163
Query: 294 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
S ++W D NG P + Y+I A W + + ++ DR +E ++E
Sbjct: 1164 SLWLRWVPLPDTQYNGNPESVGYRIRA---WRADL--PAPALLKVLADRLA--RECTLEE 1216
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L W+ YE ++ A N +G G P S + + T P P + + ++W
Sbjct: 1217 -LQEWTEYELQIQAFNAIGAG-PWSEAVRGRTRESVPSAPPENVSAEAVSSTQILLTWAA 1274
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+P +QN + YKI ++ K+ D+E +S+T++ GN +V+ + + YE++V A
Sbjct: 1275 VPESEQNGLILGYKILYKAKDLDSEPKSQTVR--GNHTQSVL-LSGLRKFVLYELQVLAF 1331
Query: 469 NDVGPG-PESEVVT 481
+G G P S VT
Sbjct: 1332 TRIGDGVPSSPAVT 1345
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 13/218 (5%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1032 TSSTISSGVPPELPGAPTNLVISNISPRSATLQFRPGYDGKTSISKWIVEGQVG---VLG 1088
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+ E V EV+ + + N L P++ Y F++ N +G S PS T
Sbjct: 1089 DEEEWVTLHEVENEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGPSPLSQPSRVIQTLQAP 1147
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEY 442
P AP + L + W PLP + N ++ Y+I WR + L +
Sbjct: 1148 PDVAPGSVTVRTASETSLWLRWVPLPDTQYNGNPESVGYRIRAWRADLPAPALLKVLADR 1207
Query: 443 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ + +TEYE+++QA N +G GP SE V
Sbjct: 1208 LARECTLEELQE---WTEYELQIQAFNAIGAGPWSEAV 1242
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+V S + W G+ PI ++ + R + W S + + + I
Sbjct: 1464 DVSSRSLVLTWLPGSDGSSPIRYFTVQVRELPHGDWQTYSSSI--------SHEATSCII 1515
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+++Y+ +V A N++G + S+ + T D P + PS + + + W+
Sbjct: 1516 ESLNPFTSYKLRVKATNDIGDSDFSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQ 1575
Query: 409 PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GNVGIA 448
P E N + Y+I++R+ +N + ++E + + +
Sbjct: 1576 PPKAESVNGLLLGYRIYYRELDYDTGPGTESKTIQNPSALRAELTPQSSFKTVNSSSALT 1635
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ Y YEV + A N +G P S V ++
Sbjct: 1636 TYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVF 1670
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L + YE + A N +G S+P + A P AP I L ++W+P
Sbjct: 1642 LKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEA-APALAPQNIQVNSLSASQLELTWDPP 1700
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV-----VRIPSEFYYTEYEVKV 465
P + QN YKI++ ++S+TL + V + VR+ + +T Y V +
Sbjct: 1701 PADSQNGIIQGYKIYY-------WESDTLNDTEKVKVLFLPETSVRLKNLTSHTRYLVCI 1753
Query: 466 QAINDVGPGPES 477
A N G GP S
Sbjct: 1754 SAFNAAGDGPRS 1765
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y++ R +S F E +G V
Sbjct: 1353 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQVAYRLASSSPNKFTTVE--VGSTVR 1410
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++T L P S Y F+ A G+GEP + ++P P ++
Sbjct: 1411 QFTATD-------LSPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPRQVMTPQ 1462
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
G + S+ LP ++P Y+ + R+ ++Q+ + ++ + F
Sbjct: 1463 GDVSSRSLVLTWLPGSDGSSPIRYFTVQVRELPHGDWQTYSSSISHEATSCIIESLNPF- 1521
Query: 458 YTEYEVKVQAINDVGP---GPESEVVTIWHD 485
T Y+++V+A ND+G E+E VT D
Sbjct: 1522 -TSYKLRVKATNDIGDSDFSAETEAVTTLQD 1551
>gi|395531224|ref|XP_003767682.1| PREDICTED: neurofascin [Sarcophilus harrisii]
Length = 1355
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 206/499 (41%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD-----PAMYQ 65
C A G P T W NG+ L E P + R D ++ RD A+YQ
Sbjct: 357 CRANGNPKPTVQWLVNGDPL--EVAP-PNPSREVAGDTIIF-------RDTQIGSSAVYQ 406
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N ++A + VL + P P + C +P P W K
Sbjct: 407 CNASNDHGYLLANAFVSVLDVPPRMLS-PRNQLIKVIHYNRTRLDCPFFGSPIPTLRWFK 465
Query: 126 DGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G GS GG ++ ENG+L ++ ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 466 NGQ--GSNLDGGNYQVHENGSLEMTMARKEDQGIYTCVATNILGKAENQVRLEV-KDPTR 522
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDG 240
++P + N+ L C + L + W + + IGN E +T
Sbjct: 523 IIRVPEDQVVKRGSNVVLECRVKHDPTLKLTVNWLKDDEPLYIGNRMKKEEDT------- 575
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP---------------PGLPGGV 285
L I + D G Y C+ + + + K + V P P +
Sbjct: 576 --LTIFGVADRDQGSYTCMASTELDRDIAKAYLTVLAAQVAPTNRMAPLPKERPDPPRDL 633
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRK 343
++ ++ + S + W G N PIT Y + + W + S+H G
Sbjct: 634 ELTDLEERSVRLTWIPGDDNNSPITEYIVQFEEDQFQPGVWHSHSKH---------PGSV 684
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+++ L P+ Y+F+VIA N++G PS PS +Y T P P + G G + ++
Sbjct: 685 NSAVLQ-LSPYVNYQFRVIAVNDVGSSHPSIPSERYRTSGAPPESNPGDVKGAGSRKNNM 743
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEY 461
I+W P+ PN+ Y + WR++ E + + N + R + Y Y
Sbjct: 744 EITWTPMNATSAFGPNLRYIVKWRRR-------EGRESWNNATVWGSRYMVSPTPVYVPY 796
Query: 462 EVKVQAINDVGPGPESEVV 480
E++VQA ND G GPE + V
Sbjct: 797 EIRVQAENDFGKGPEPDTV 815
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 118/297 (39%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P + F + L I + + P
Sbjct: 52 VDPRDNILIECEAKGNPAPSFQWTRNSRFFNVAKDP---RVSMFRRSGTLVIDFRSGGRP 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 109 EEYEGEYQCFARNKFGTAVSNRIFLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 167
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA----------TNV 164
P P W I R +NG+L S V D+ YSC A N
Sbjct: 168 PSPVIFWMSSSMEPINQDKRVSQGQNGDLYFSNVMLQDAKTDYSCNARFHFTHTIQQKNP 227
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVR 222
+ R + PS+ L + R +L L C A D+A W G
Sbjct: 228 FTLKVLTTRGVSERTPSFMYPLGTSSSQMVLRGMDLLLECIASGVPAPDIA--WYKKG-- 283
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ +++ N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 284 -GDLPAGKVKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 336
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 28/234 (11%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFKKRPL--ESETYAGEGGNVTIFCN 112
Y C A+ + + L+VLT + PSF PL S G ++ + C
Sbjct: 210 YSCNARFHFTHTIQQKNPFTLKVLTTRGVSERTPSFMY-PLGTSSSQMVLRGMDLLLECI 268
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDES 170
P P W K G + +G + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 269 ASGVPAPDIAWYKKGGDLPAGKVK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRH 326
Query: 171 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ V P Y+ P + +A + +L C A+ V W NG D E
Sbjct: 327 TISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNG------DPLE 377
Query: 231 LETPNIN--IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+ PN + + G + + + Y+C + G + V +++ PP +
Sbjct: 378 VAPPNPSREVAGDTIIFRDTQIGSSAVYQCNASNDHGYLLANAFVSVLDVPPRM 431
>gi|20455467|sp|Q05695.3|L1CAM_RAT RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
Short=NCAM-L1; AltName: Full=Nerve-growth
factor-inducible large external glycoprotein;
Short=NILE; AltName: CD_antigen=CD171; Flags: Precursor
Length = 1259
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 208/479 (43%), Gaps = 38/479 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + + +Y I+ L + + P D + QC A+N
Sbjct: 353 CQVQGRPQPEVTWRINGMSIEK----VNKDQKYRIEQGSLILSNVQPS-DTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 408 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG+L I + +D+G Y C A N L V + P
Sbjct: 466 TVLQDERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQG--P 523
Query: 189 KITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEIT 246
+ TI + C A + L + W +G DL E ++ I+ G L I
Sbjct: 524 RSTIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGQLVIK 578
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGA 303
+ ++D G+Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 579 SLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAE 638
Query: 304 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 639 DHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRV 688
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I
Sbjct: 689 TAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQ 748
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y++ WR + ET KE V + + + + YE+KVQA+N+ G GPE +V
Sbjct: 749 YRVQWRPLG----KQETWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVT 802
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 186/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 259 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 367
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G I + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 368 NGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHG-------LLLANAYIYV 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 421 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 474
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 475 PYANGHLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRST-IEKKGAR 533
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 534 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGQLVIKSLDYSDQ 585
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
++ +A EL E + +P P+ S K + +SW P E N
Sbjct: 586 GDYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 641
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
+P Y I F K+ E K GN +++ Y Y +V AIN GPG
Sbjct: 642 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 698
Query: 475 --PESEVV 480
P SE V
Sbjct: 699 PSPVSETV 706
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 110/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 52 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 112 RCYASNNLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 171 MNSKILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S + + ++L L C A E W H
Sbjct: 231 TNSMIDRKPRLLFPTNSSSH------LVALQGQSLILECIA--EGFPTPTIKWLHPS--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 280 DPMPTDRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 332
>gi|397498087|ref|XP_003819824.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Pan paniscus]
Length = 2159
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 201/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 354 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 408
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP++ T +G + C APKP WK++ +I+
Sbjct: 409 EGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEVSGAPKPAITWKRENHIL 466
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 467 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHP- 525
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + L C A + + + Y+W + V + + + + DG LL I+
Sbjct: 526 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-IS 581
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + H + + W
Sbjct: 582 QTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSWVRPFD 641
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI +Y I+ + NS W V +G E+ T + L P TY+F+V A
Sbjct: 642 GNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 692
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 693 NEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 752
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 753 RYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 807
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 105/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 255 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 304
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y C A + + ++A L ++ P F P ES A V I C P P
Sbjct: 305 PYVCEAALRGSAFEPARATAFLFIIE-PPYFTAEP-ESRISAEVEETVDIGCQAMGVPLP 362
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 363 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 422
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 423 NIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 478
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 479 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 516
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1846 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1899
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1900 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 1950
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 100/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+ +SE + +Y I +++ L D Y+C
Sbjct: 68 LVLTCLAEGSWPLEFKWMRD----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 115
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ A + I + P+P+ W
Sbjct: 116 VVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI----TSYPRPQVTW 171
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL---HGP 180
++G+ I R I L+I + D+G Y A N + I L
Sbjct: 172 FREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIYLSIARDV 231
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A L C A + D++ W NGVRI
Sbjct: 232 GTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI--------- 282
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 283 TSGLHSFGRRLTISNPTSADTGPYVC 308
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1431 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1488
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1489 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1538
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 444
+ I W+P E N Y+I++R+ K+ ++E + +
Sbjct: 1539 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKT 1598
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1599 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1641
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1619 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1677
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP
Sbjct: 1678 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1735
Query: 477 SE 478
S+
Sbjct: 1736 SD 1737
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 314
V + + T +T+ PP LPG + + + SAT+Q+ G I+ + +
Sbjct: 992 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1051
Query: 315 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 367
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1052 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1100
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 424
G S S T P AP+ + L + W PLP + N ++ Y+I
Sbjct: 1101 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1160
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 478
+WR ++ QS + + + R+ EF + EYE+++QA N VG GP SE
Sbjct: 1161 YWR----SDLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1211
Query: 479 VV 480
VV
Sbjct: 1212 VV 1213
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 18/238 (7%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1296 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1355
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1356 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1407
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1408 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1466
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
E+Q+ + VV F T Y+++++A ND+G E+E VT D
Sbjct: 1467 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQD 1522
>gi|284004976|ref|NP_001164836.1| neural cell adhesion molecule L1 precursor [Oryctolagus cuniculus]
gi|217418262|gb|ACK44266.1| L1 cell adhesion molecule isoform 2 precursor (predicted)
[Oryctolagus cuniculus]
Length = 1247
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 210/483 (43%), Gaps = 44/483 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + + LP +DQ +Y IQ L + P D + QC A+N
Sbjct: 349 CQVQGRPQPEVTWRING--IPVDELP-KDQ-KYRIQHGALILSNAQPS-DTMVTQCEARN 403
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L +++TY A EG + C AP P W ++G
Sbjct: 404 RHGLLLANAYIYVVQLPARILTG--DNQTYMAVEGSTAHLLCKAFGAPVPTVQWLDEEGT 461
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG L I + +D+G Y C A N L V + Q P
Sbjct: 462 TVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIMANLQVKEA-TQITQGPR 520
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITN 247
+ C A + L + W +G DL+EL ++ ++ G L I +
Sbjct: 521 SAIEKKGARVTFTCQASFDPSLQPSITWRGDG-----RDLHELGDSDKYFLEAGRLVIHS 575
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGAT 304
++D G Y CV + + ++ ++ ++V G PG ++V + H ++ + W+
Sbjct: 576 LDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPQLEVSDHHLLKQSQVRLSWSPAED 635
Query: 305 NGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
+ PI Y I +A W S +GK T A+++ L P+ Y
Sbjct: 636 HNAPIEKYDIEFEDKEMAPEKWYS---------LGKVPGNQTS---ATLK--LSPYVHYT 681
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP
Sbjct: 682 FRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAP 741
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ Y++ WR E + V ++ + + + YE+KVQA+N G GPE +
Sbjct: 742 QVQYRVQWRPVGTQGPWQEQI-----VSDPILVVSNTSTFVPYEIKVQAVNSQGKGPEPQ 796
Query: 479 VVT 481
VVT
Sbjct: 797 VVT 799
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 186/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G V + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHAYYITV-EAAPYWLHKP-QSHLY-GPGETVRLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + ++G L++S D+ + C A N HG L++ + Y
Sbjct: 364 NGIPVDELPKDQKYRIQHGALILSNAQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + + + E + D
Sbjct: 417 VQLPARI-LTGDNQTYMAVEGSTAHLLCKAF-----GAPVPTVQWLDEEGTTVLQDERFF 470
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 471 PYANGTLGIRDLQANDTGRYFCQAANDQNNVTIMANLQVKEATQITQGPRSA-IEKKGAR 529
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ P I R + H +G + D+Y + + L
Sbjct: 530 VTFTCQASFD-PSLQPSITWRGDGRDL------HELG-DSDKYFLEAGRLVIHSLDYSDQ 581
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A EL E + +P P S K + +SW P E N
Sbjct: 582 GNYSCVASTELDEVESRAQLLVVGSPGPVPQLEVS--DHHLLKQSQVRLSWSPA--EDHN 637
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN A +++ Y Y +V AIN GPG
Sbjct: 638 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSP---YVHYTFRVTAINKYGPGE 694
Query: 475 --PESEVV 480
P SE V
Sbjct: 695 PSPASETV 702
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 112/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P V + W R+G E L + I N P+R
Sbjct: 47 DISLKCEASGRPQVQFRWTRDGIHFKPEEELGVTVYQAPHSGSFTITGNNSNF----PQR 102
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 103 FQGIYRCFASNKLGTAMSHEIQLMAEGAPKWPKERVKPVEVE-EGESVVLPCNPPPSAEP 161
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 162 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPID 221
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 222 LRVKATNSMIDRKPRLLSPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 275
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N L++ N D GEY C+ ++++G + VE
Sbjct: 276 -----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHAYYITVEAA 327
Query: 279 P 279
P
Sbjct: 328 P 328
>gi|297287847|ref|XP_001105243.2| PREDICTED: protein sidekick-1-like [Macaca mulatta]
Length = 2138
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 201/480 (41%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 351 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP ++T +G + C APKP WK++ +I+
Sbjct: 406 EGGEIQTHTYLDVTNIAPVFTQRP--ADTTVTDGMTAILRCEVSGAPKPAITWKRENHIL 463
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 464 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHP- 522
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLLE 244
P + L C A + + + Y+W + N+ L T I + DG LL
Sbjct: 523 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKD-----NVALTPSSTSRIVVEKDGSLL- 576
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G+Y C + S G S + V P P + H + + W
Sbjct: 577 ISQTWSGDIGDYTCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSWVRP 636
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
PI +Y I+ + NS W V +G E+ T L P TY+F+V
Sbjct: 637 FDGNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VGGLTPARTYQFRVC 687
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A NE+G G+ S+ + + P + P P I G + + W+P P + N Y
Sbjct: 688 AVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGY 747
Query: 423 KIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+ +R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 748 ILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 804
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 106/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 252 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 301
Query: 63 MYQCRAKNQLKTRYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A L + + A+ + +T P F P ES A V I C P P
Sbjct: 302 LYVCEAA-LLGSAFEPARAKAFLFITEPPYFTAEP-ESRISAEVEETVDIRCQAMGVPLP 359
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 360 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 419
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 420 NIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 475
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 476 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 513
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1823 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1876
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A NE+GYGEPSSPS + + P+
Sbjct: 1877 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1927
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 109/291 (37%), Gaps = 45/291 (15%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+G L + + + +Y I +++ L D Y+C
Sbjct: 66 LVLTCLAEGSWPLEFKWMRDGRELTTYS----SEYKYIIP----SLQKL----DAGFYRC 113
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + SF G + + + P+P+ W
Sbjct: 114 VVRNRMGALLQRKSEVQVAYMG---SFTDTDQRKTVPQGRAAILNLLPI-TSYPRPQVTW 169
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----- 178
++G+ I R I L+I + D+G Y A N + I L
Sbjct: 170 FREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSIANIG 229
Query: 179 -----GPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
P+ +PP + +A L C A + D++ W NGVRI
Sbjct: 230 TPETTAPTIV--VPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI-------- 279
Query: 232 ETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 279
T ++ G L I+N + AD G Y C ++ S K + + PP
Sbjct: 280 -TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPARAKAFLFITEPP 329
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1428 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACIVDR-- 1485
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1486 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1535
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ I W+P E N Y+I++R+ + + +++TLK + + +
Sbjct: 1536 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTDLKK--- 1592
Query: 458 YTEYEVKVQAINDVGPGPESEVVTIW 483
Y YEV + A N +G P S V ++
Sbjct: 1593 YRRYEVIMTAYNIIGESPASAPVEVF 1618
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 28/221 (12%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 324
T+ ++ PG P G H TS+ IQW D + NG + Y+I +
Sbjct: 1511 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRI---------Y 1560
Query: 325 FNVSEHVIGKEVDRYTGRKEASIENVLV---PWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
+ E+ G + T + ++ L + YE + A N +G S+P +
Sbjct: 1561 YRELEYEAGSGTEAKTLKSPIALRAELTDLKKYRRYEVIMTAYNIIGESPASAPVEVFVG 1620
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW---RKKNDTE-FQSE 437
A P AP + L ++W+P P E QN YKI++ +NDTE +
Sbjct: 1621 EA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNDTEKMKVL 1679
Query: 438 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
L E VVR+ + +TEY V + A N G GP S+
Sbjct: 1680 FLPE------PVVRLKNLTSHTEYLVSISAFNAAGDGPRSD 1714
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 39/231 (16%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1000 TSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG------ 1053
Query: 326 NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1054 -----AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRV 1108
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 435
T P AP+ + L + W PLP + N ++ Y+I +WR ++ Q
Sbjct: 1109 IQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SDLQ 1164
Query: 436 SETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
S L + + R+ EF + EYE+++QA N VG GP SEVV
Sbjct: 1165 SSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVV 1210
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 22/240 (9%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1293 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1352
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1353 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1404
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1405 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1463
Query: 431 DTEFQ--SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
E+Q S ++ I P +T Y+++++A ND+G E+E VT D
Sbjct: 1464 RGEWQTYSSSISHEATACIVDRLRP----FTSYKLRLKATNDIGDSDFSSETEAVTTLQD 1519
>gi|149029901|gb|EDL85013.1| rCG43874 [Rattus norvegicus]
Length = 1133
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 206/479 (43%), Gaps = 38/479 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + + +Y I+ L + + P D + QC A+N
Sbjct: 231 CQVQGRPQPEVTWRINGMSIEK----VNKDQKYRIEQGSLILSNVQPS-DTMVTQCEARN 285
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 286 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 343
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG L I + +D+G Y C A N L V + P
Sbjct: 344 TVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQG--P 401
Query: 189 KITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEIT 246
+ TI + C A + L + W +G DL E ++ I+ G L I
Sbjct: 402 RSTIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGQLVIQ 456
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGA 303
+ ++D G Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 457 SLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAE 516
Query: 304 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 517 DHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRV 566
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I
Sbjct: 567 TAINKYGSGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQ 626
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y++ WR + ET KE V + + + + YE+KVQA+N+ G GPE +V
Sbjct: 627 YRVQWRPLG----KQETWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVT 680
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 184/488 (37%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 137 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 188
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 189 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 245
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G I + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 246 NGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHG-------LLLANAYIYV 298
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 299 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 352
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 353 PYANGTLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRST-IEKKGAR 411
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 412 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGQLVIQSLDYSDQ 463
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A EL E + +P P+ S K + +SW P E N
Sbjct: 464 GNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 519
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG--- 472
+P Y I F K+ E K GN +++ Y Y +V AIN G
Sbjct: 520 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGSGE 576
Query: 473 PGPESEVV 480
P P SE V
Sbjct: 577 PSPVSETV 584
>gi|354467816|ref|XP_003496364.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1-like [Cricetulus
griseus]
Length = 2126
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 201/484 (41%), Gaps = 43/484 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ LN L++ + L I+ L+PE D ++QC A N
Sbjct: 318 CRAMGVPLPTLQWYKDAVPLNK----LQNLRYRVLPSGSLHIQKLSPE-DSGIFQCFANN 372
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F +RP++ T +G + C APKP WK+ I+
Sbjct: 373 EGGEIQTHTYLDVTNIAPAFTQRPVD--TTVTDGMTAVLKCEVSGAPKPAITWKRGNLIL 430
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N + L V + S
Sbjct: 431 ASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPP 490
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLLE 244
++ I L C A + + Y+W + NM + + I + DG LL
Sbjct: 491 EDRVVIKG-TTATLCCGATHDPRTTLRYVWKKD-----NMVITPSSSSRIVVEKDGSLL- 543
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDG 302
I+ D G+Y C + S G S + V P P + + VH S T+ W
Sbjct: 544 ISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPHPPQNLLASLSPVHSHSVTLSWVRP 603
Query: 303 ATNGRPITHYKIIARTNWNSTW----FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
P+ +Y I+ + NS W NVS + G V L P TY+
Sbjct: 604 FDGNSPVLYY-IVQLSENNSPWKVHLSNVSPEMTGITVSG------------LTPARTYQ 650
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N++G G+ S+ + + P + P P I G + + W+P P + N
Sbjct: 651 FRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGV 710
Query: 419 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y + +R E Q + + + + +T+YE++V A N G G S
Sbjct: 711 LRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFS 767
Query: 478 EVVT 481
VT
Sbjct: 768 RAVT 771
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1809 AEGSPGSPRNVLVTK-STSELTLQWTEGNAGNTPTTGYVIEARPSDEGLW-----DMFAK 1862
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1863 DIPRSATSYTVGLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSTAVSAQAEAPF 1914
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 104/266 (39%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 32 LVLTCLAEGSWPLEFKWIHN----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 79
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ +A V I + P+P+ W
Sbjct: 80 VVRNRMGALLQRKSEVQVAYMGNFMDTDQRKTVSQGHAALLNLVPII----SCPRPQVTW 135
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I D+G Y A N + I +
Sbjct: 136 FREGHKIIPSSRIAITLENQLVILATKASDAGAYYVQAVNERNGENKTSPFIHLSIARDT 195
Query: 181 SYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 196 GTPEAMAPVIVVAPGNRSVVAGSSETTLECIANARPVEELSLYWKRNGVRL--------- 246
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 247 TSGLHSFGRRLTISNPTSADTGLYVC 272
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1395 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1452
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1453 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1502
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 444
+ I W+P E N Y+I++R+ K+ + ++E + +
Sbjct: 1503 SSVLIQWQPPRDESLNGLLQGYRIYYRELESEAGMGSEAKTHKSPSALRAELTAQSSFKT 1562
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1563 VNSSSTLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVF 1605
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S P + A P AP + L ++W+P P E QN
Sbjct: 1583 YEVIMTAYNIIGESPASVPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1641
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D+ ++E +K + VV+I + +T+Y+V + A N G GP+
Sbjct: 1642 GNIQGYKIYYWEA-DSRNETEKMKVL-FLPEPVVKIKNLTSHTKYQVSISAFNAAGDGPK 1699
Query: 477 SE 478
S+
Sbjct: 1700 SD 1701
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 28/236 (11%)
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 314
V + VG ++T +T+ PP LPG + + + SAT+Q+ G I + +
Sbjct: 957 AVTAAGVG-LTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIV 1015
Query: 315 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 367
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1016 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIV 1064
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 424
G S S T P AP+ I L + W PLP + N ++ Y++
Sbjct: 1065 GPSPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRVK 1124
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+WR + ++ + + + I +TEYE+++QA N +G GP SE+V
Sbjct: 1125 YWRSDQPSSVLAQVVNDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELV 1177
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 18/212 (8%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVD 337
PG P + EV T+ I W I Y+I R S F E +G V
Sbjct: 1288 PGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLARGSPHTFTTVE--VGATVR 1345
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1346 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1397
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 456
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1398 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVERLRP-- 1455
Query: 457 YYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
+T Y+++++A ND+G E+E VT D
Sbjct: 1456 -FTSYKLRLKATNDIGDSDFSAETEAVTTLQD 1486
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 108 TIFCNPEAAP--KPKFVWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCTA 161
T+ C A P + WK++G + SG GRR L IS + D+G+Y C A
Sbjct: 222 TLECIANARPVEELSLYWKRNGVRLTSGLHSFGRR-------LTISNPTSADTGLYVCEA 274
Query: 162 T---NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
T + +K L ++ P + + +I ++ + C A L + W
Sbjct: 275 TLRGSTFEPARAKAFLSIIEPPYFTAEPESRILGEVEESVDIPCRAMGVPLPTLQ--WYK 332
Query: 219 NGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT 271
+ V LN+L+ + G L I S D+G ++C + G+I T T
Sbjct: 333 DAV-----PLNKLQNLRYRVLPSGSLHIQKLSPEDSGIFQCFANNEGGEIQTHT 381
>gi|426355367|ref|XP_004045095.1| PREDICTED: protein sidekick-1, partial [Gorilla gorilla gorilla]
Length = 2273
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 201/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 468 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLTSGGLRIQKLRPE-DSGIFQCFASN 522
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP++ T +G + C APKP WK++ +I+
Sbjct: 523 EGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEVSGAPKPAITWKRENHIL 580
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 581 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHP- 639
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + L C A + + + Y+W + V + + + + DG LL I+
Sbjct: 640 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-IS 695
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + H + + W
Sbjct: 696 QTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSWVRPFD 755
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI +Y I+ + NS W V +G E+ T + L P TY+F+V A
Sbjct: 756 GNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 806
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 807 NEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 866
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 867 RYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 921
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 103/281 (36%), Gaps = 29/281 (10%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 369 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 418
Query: 63 MYQCRAKNQLKT-RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A + T + A + ++P + ES A V I C P P
Sbjct: 419 PYVCEAALRGSTFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTL 478
Query: 122 VWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V +
Sbjct: 479 QWYKDAISISRLQNPRYKVLTSGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVTNI 538
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELETP 234
+ Q P T+ LRC + +I VRI L
Sbjct: 539 APVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML------ 592
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 593 ---LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 630
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1959 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 2012
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 2013 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2064
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 96/266 (36%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W + +SE + +Y I ++D Y+C
Sbjct: 182 LVLTCLAEGSWPLEFKWMHD----DSELTTYSSEYKYIIPSLQ--------KQDAGFYRC 229
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ A + + P+P+ W
Sbjct: 230 VVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAA----ILNLLPITSYPRPQVTW 285
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I +
Sbjct: 286 FREGHKIIPSNRIAITLENQLVILATTTGDTGAYYVQAVNEKNGENKTSPFIHLSIARDV 345
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A L C A + D++ W NGVRI
Sbjct: 346 GTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI--------- 396
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 397 TSGLHSFGRRLTISNPTSADTGPYVC 422
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1545 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1602
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1603 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1652
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKE-------------YGN 444
+ I W+P E N Y+I++R+ + + +++TLK +
Sbjct: 1653 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSTFKT 1712
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1713 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1755
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L I+W+P P E QN
Sbjct: 1733 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEITWDPPPPESQN 1791
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP
Sbjct: 1792 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1849
Query: 477 SE 478
S+
Sbjct: 1850 SD 1851
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 314
V + + T +T+ PP LPG + + + SAT+Q+ G I+ + +
Sbjct: 1106 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1165
Query: 315 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 367
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1166 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1214
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 424
G S S T P AP+ + L + W PLP + N ++ Y+I
Sbjct: 1215 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1274
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 478
+WR ++ QS + + + R+ EF + EYE+++QA N VG GP SE
Sbjct: 1275 YWR----SDLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1325
Query: 479 VV 480
VV
Sbjct: 1326 VV 1327
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 18/238 (7%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1410 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1469
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1470 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATN-------LAPESAYIFRLSAKTRQGWG 1521
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1522 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1580
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
E+Q+ + VV F T Y+++++A ND+G E+E VT D
Sbjct: 1581 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQD 1636
>gi|115558|sp|P11627.1|L1CAM_MOUSE RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
Short=NCAM-L1; AltName: CD_antigen=CD171; Flags:
Precursor
gi|53337|emb|CAA31368.1| unnamed protein product [Mus musculus]
Length = 1260
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 212/479 (44%), Gaps = 38/479 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG ++ ET+ +DQ +Y I+ L + + P D + QC A+N
Sbjct: 353 CQVQGRPQPEITWRING--MSMETVN-KDQ-KYRIEQGSLILSNVQP-TDTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 408 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG L I + +D+G Y C A N L V + Q P
Sbjct: 466 TVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPR 524
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITN 247
+ C A + L + W +G DL E ++ I+ G L I +
Sbjct: 525 SAIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQS 579
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGAT 304
++D G Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 580 LDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAED 639
Query: 305 NGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 640 HNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVT 689
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I Y
Sbjct: 690 AINKYGPGEPSPVSESVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQY 749
Query: 423 KIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ WR + E ++ +T+ + VV S F YE+KVQA+N+ G GPE +V
Sbjct: 750 RVQWRPQGKQETWRKQTVSD----PFLVVSNTSTF--VPYEIKVQAVNNQGKGPEPQVT 802
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 184/484 (38%), Gaps = 51/484 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 259 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 367
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 368 NGMSMETVNKDQKYRIEQGSLILSNVQPTDTMVTQCEARNQHG-------LLLANAYIYV 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 421 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 474
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 475 PYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSA-IEKKGAR 533
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 534 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGKLVIQSLDYSDQ 585
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A EL E + +P P+ S K + +SW P E N
Sbjct: 586 GNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 641
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+P Y I F K+ E K GN +++ Y Y +V AIN GPG
Sbjct: 642 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 698
Query: 476 ESEV 479
S V
Sbjct: 699 PSPV 702
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 52 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N+L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 112 RCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPPRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 171 MNSKIFDIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S ++ ++L L C A E W H
Sbjct: 231 TNSMIDRKPRLLFPTNSS------SRLVALQGQSLILECIA--EGFPTPTIKWLHPS--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 280 DPMPTDRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 332
>gi|226133|prf||1411301A neural adhesion mol L1
Length = 1260
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 212/479 (44%), Gaps = 38/479 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG ++ ET+ +DQ +Y I+ L + + P D + QC A+N
Sbjct: 353 CQVQGRPQPEITWRING--MSMETVN-KDQ-KYRIEQGSLILSNVQPS-DTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 408 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG L I + +D+G Y C A N L V + Q P
Sbjct: 466 TVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPR 524
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITN 247
+ C A + L + W +G DL E ++ I+ G L I +
Sbjct: 525 SAIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQS 579
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGAT 304
++D G Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 580 LDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAED 639
Query: 305 NGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 640 HNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVT 689
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I Y
Sbjct: 690 AINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQY 749
Query: 423 KIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ WR + E ++ +T+ + VV S F YE+KVQA+N+ G GPE +V
Sbjct: 750 RVQWRPQGKQETWRKQTVSD----PFLVVSNTSTF--VPYEIKVQAVNNQGKGPEPQVT 802
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 186/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 259 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 367
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 368 NGMSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHG-------LLLANAYIYV 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 421 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 474
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 475 PYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSA-IEKKGAR 533
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 534 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGKLVIQSLDYSDQ 585
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A EL E + +P P+ S K + +SW P E N
Sbjct: 586 GNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 641
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
+P Y I F K+ E K GN +++ Y Y +V AIN GPG
Sbjct: 642 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 698
Query: 475 --PESEVV 480
P SE V
Sbjct: 699 PSPVSETV 706
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 52 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N+L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 112 RCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 171 MNSKIFDIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S ++ ++L L C A E W H
Sbjct: 231 TNSMIDRKPRLLFPTNSS------SRLVALQGQSLILECIA--EGFPTPTIKWLHPS--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 280 DPMPTDRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 332
>gi|296488521|tpg|DAA30634.1| TPA: neuronal cell adhesion molecule isoform 1 [Bos taurus]
Length = 1302
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 205/496 (41%), Gaps = 53/496 (10%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D T C A G P SW NG + E P +D R D ++ + ER A+
Sbjct: 375 EEDGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSKVQ--ERSSAV 429
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPK 120
YQC A N+ ++A + VL P R L S Y + C +P P
Sbjct: 430 YQCNASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPLPT 485
Query: 121 FVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W K GS R I+ ENG L I +D +G Y+C A N GM ++ L +
Sbjct: 486 IEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI- 542
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P+ + P + + C + L +W + + N
Sbjct: 543 KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPN-------DGRFT 595
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQV 287
+D L + + + D G Y CV +T+ +S + V P P P +++
Sbjct: 596 VDKDRLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLEL 655
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 345
+ S + WT G N PIT + I + W + +E V G +
Sbjct: 656 TDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE-VPGTQT--------- 705
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I
Sbjct: 706 TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVI 765
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 766 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 820
Query: 465 VQAINDVGPGPESEVV 480
VQA+ND G PE V
Sbjct: 821 VQALNDAGFAPEPAAV 836
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 111/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 288 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIVQVTEADSGNYQ 339
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P E G T+ C PKP+ W
Sbjct: 340 CIAKNALGAIHHTISVTV-KAAPYWIIAPQNLVLSPEEDG--TLICRANGNPKPRISWLS 396
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 397 NGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 453 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALR----EDIY 502
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ + G LEI A G Y CV ++ +G + ++ P
Sbjct: 503 VLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKDP 545
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 115/316 (36%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPSPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-IILRNGQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITIAAHRN----------LQLRCS 203
+DE + +G + Q PP L L C
Sbjct: 234 ISVKVISVDELNDTIAANLSDTEFYGAKSHRQRPPTFLTPDGNTSRKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + AD+G Y+C+ K+
Sbjct: 294 A--EGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQIVQVTEADSGNYQCIAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 346 LGAIHHTISVTVKAAP 361
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDKVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ WEP
Sbjct: 960 IVNPTLDSLTLEWEP 974
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 343
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NALGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 400
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|345801458|ref|XP_547004.3| PREDICTED: protein sidekick-1 [Canis lupus familiaris]
Length = 2114
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 202/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 312 CRAMGVPLPTLQWYKDAISISK----LQNPRYKMLSSGGLRIQKLRPE-DSGIFQCFASN 366
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F + P++ T +G T+ C APKP W++ +I+
Sbjct: 367 EGGEIQTYTYLDVTNVAPAFTQLPVD--TTVTDGMTATLRCEVSGAPKPAITWRRGKHIL 424
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PVS D+G Y+C A N+ G + L V + ++
Sbjct: 425 ASGSVRIPRFMLLESGGLQIAPVSIQDAGNYTCYAANMEGSLNASAALTVWNR-TFIINP 483
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + LRC A + + + Y+W + I + + + DG LL I+
Sbjct: 484 PEDRVVIKGTTATLRCGATHDPRITLRYVWKKDNTVITPSSSSRIV---VEKDGSLL-IS 539
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + H + + W
Sbjct: 540 QTWSGDIGDYTCEIISEGGNDSRTARLEVIELPHSPQNLLATLNSSHSHTVMLSWVRPFD 599
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y I+ + NS W V +G E+ T R L P TY+F+V A
Sbjct: 600 GNSPVLYY-IVELSENNSPW-KVHLSNVGPEMTGITVRG-------LTPARTYQFRVCAV 650
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 651 NQVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 710
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E Q + + + + +T+YE++V A N G G S VT
Sbjct: 711 RYRLAGLPGEHQQRNIT---SPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVT 765
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 104/282 (36%), Gaps = 31/282 (10%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++T C A P ++ +W RNG ++ L R+ N + D
Sbjct: 213 SEITLECIANARPIQELHVNWKRNGVRISGG---LHSFGRHLTISNPTSA-------DTG 262
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
+Y C A T ++ L++ P F P ES V I C P P
Sbjct: 263 LYVCEATLSGSTFDAATAKAFLSIIEPPYFTAEP-ESRILVEVEETVDIVCRAMGVPLPT 321
Query: 121 FVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V +
Sbjct: 322 LQWYKDAISISKLQNPRYKMLSSGGLRIQKLRPEDSGIFQCFASNEGGEIQTYTYLDVTN 381
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELET 233
+ QLP T+ LRC + +I VRI L
Sbjct: 382 VAPAFTQLPVDTTVTDGMTATLRCEVSGAPKPAITWRRGKHILASGSVRIPRFML----- 436
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I S DAG Y C + G ++ + V
Sbjct: 437 ----LESGGLQIAPVSIQDAGNYTCYAANMEGSLNASAALTV 474
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1804 EGSPGSPRDVLVTK-SASELTLQWTEGNAGRTPTTGYVIEARPSDEGLW-----DMFVKD 1857
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A N+ GYGEPSSPS +T + P+
Sbjct: 1858 IPRSATSYSVSLDK-LRQGVTYEFRVVAVNQAGYGEPSSPSMAVSTQVETPF 1908
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 116/307 (37%), Gaps = 45/307 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 26 LVLTCLAEGSWPLEFKWMHN----DSELTTYTSEYKYIIP----SLQRL----DAGFYRC 73
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ +A V + P+P+ W
Sbjct: 74 VVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQGHAA----VLNLLPITSCPRPQVTW 129
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + LI +
Sbjct: 130 FREGHKIIPSHRIAITLENQLVILATTAGDTGAYYAQAVNERNGENKTSPLIHLSIARDV 189
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A + L C A+ + ++ W NGVRI
Sbjct: 190 GTPETMAPVIVVPPGNRSVVAGSSEITLECIANARPIQELHVNWKRNGVRISG------- 242
Query: 233 TPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGL---PGGVQ 286
++ G L I+N + AD G Y C + ST + K + + PP P
Sbjct: 243 --GLHSFGRHLTISNPTSADTGLYVCEATLSGSTFDAATAKAFLSIIEPPYFTAEPESRI 300
Query: 287 VVEVHKT 293
+VEV +T
Sbjct: 301 LVEVEET 307
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 314
V + ++T +T+ PP LPG + + + SAT+Q+ G I+ + +
Sbjct: 950 AAVTTAGAGLATSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1009
Query: 315 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 367
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1010 EGQVG-----------AIGDEEEWVSLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIV 1058
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 424
G S S T P AP+ + L + W PLP + N ++ Y+I
Sbjct: 1059 GSSPVSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1118
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESE 478
+WR + Q+ +L + N R+ EF +TEYE+++QA N +G GP S
Sbjct: 1119 YWRP----DLQAPSLTQVIND-----RLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSV 1169
Query: 479 VV 480
V
Sbjct: 1170 AV 1171
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 86/223 (38%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S V+R
Sbjct: 1389 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACAVER-- 1446
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + S+ + T D P + PS I
Sbjct: 1447 ----------LRPFTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSFISVTPHTT 1496
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 444
+ I W P E N Y+I++R+ + S+TLK +
Sbjct: 1497 SSVLIQWRPPRDESLNGLLQGYRIYYRELESEASAATVSKTLKTPSALRAELTAQSSFKT 1556
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1557 VNSSSTLTTYELTHLKKYRRYEVILTAYNIIGESPASAPVEVF 1599
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 21/230 (9%)
Query: 259 VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYK 313
+V S+ S++ ++ PP + P V V +TS ++W D NG P + Y+
Sbjct: 1057 IVGSSPVSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYR 1116
Query: 314 IIARTNWNSTWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 372
I W S VI ++R E +IE L W+ YE ++ A N +G G P
Sbjct: 1117 I---KYWRPDLQAPSLTQVINDRLER-----EFTIEG-LEEWTEYELQMQAFNAIGAG-P 1166
Query: 373 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-D 431
S + + T P AP + + ++W +P + QN + YK+ +R K+ D
Sbjct: 1167 WSVAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLFRAKDLD 1226
Query: 432 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVV 480
E +S ++ GN + + + + YE++V A +G G P S ++
Sbjct: 1227 PEPRSHVVR--GNHSQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSSPLI 1273
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 38/236 (16%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIAR-TNWNST 323
T ++ PG P V H TS+ IQW D + NG + Y+I R ++
Sbjct: 1472 TDAVTTLQDVPGEPPSFISVTPHTTSSVLIQWRPPRDESLNGL-LQGYRIYYRELESEAS 1530
Query: 324 WFNVSEHVIGKEVDRYTGRKEASIENV-------------LVPWSTYEFKVIAGNELGYG 370
VS+ + R ++S + V L + YE + A N +G
Sbjct: 1531 AATVSKTLKTPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVILTAYNIIGES 1590
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW---R 427
S+P + A P AP I L ++W+P P E QN YK+++
Sbjct: 1591 PASAPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEAE 1649
Query: 428 KKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+N+TE F ET+ + N+ +T+Y V + A N G GP+S+
Sbjct: 1650 SQNETEKMKVLFLPETMVKLKNLT----------SHTQYLVSISAFNAAGDGPQSD 1695
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 18/212 (8%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1282 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1339
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1340 QFTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1391
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 456
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1392 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACAVERLRP-- 1449
Query: 457 YYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
+T Y+++++A ND+G E++ VT D
Sbjct: 1450 -FTSYKLRLKATNDIGDSDFSAETDAVTTLQD 1480
>gi|332257801|ref|XP_003277993.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Nomascus
leucogenys]
Length = 2164
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 201/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L+PE D ++QC A N
Sbjct: 352 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLSPE-DSGIFQCFASN 406
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP++ T +G + C APKP WK++ +I+
Sbjct: 407 EGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEVSGAPKPAITWKRENHIL 464
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 465 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASAMLTVWNRTSIIHP- 523
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + L C A + + + Y+W + V + + + + DG LL I+
Sbjct: 524 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-IS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + H + + W
Sbjct: 580 QTWSGDIGDYTCEIVSEGGNDSRMARLEVIELPHSPQNLLASPKSSHSHAVVLSWVRPFD 639
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI +Y + N NS W V +G E+ T + L P TY+F+V A
Sbjct: 640 GNSPILYYVVELSEN-NSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 690
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 691 NEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 750
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 751 RYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 805
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 103/281 (36%), Gaps = 29/281 (10%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 253 SETTLECIANARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 302
Query: 63 MYQCRAKNQLKT-RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A + + A+ + ++P + ES A V I C P P
Sbjct: 303 PYVCEAALRGGAFEPARAKAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTL 362
Query: 122 VWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W KD I R K+ +G L I +S +DSGI+ C A+N G ++ L V +
Sbjct: 363 QWYKDAISISRLQNPRYKVLASGGLRIQKLSPEDSGIFQCFASNEGGEIQTHTYLDVTNI 422
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELETP 234
+ Q P T+ LRC + +I VRI L
Sbjct: 423 APVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML------ 476
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ + V
Sbjct: 477 ---LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASAMLTV 514
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1850 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1903
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S+ L TYEF+V+A NE GYGEPSSPS + + P+
Sbjct: 1904 DIPRSATSYTLSLAK-LRQGVTYEFRVVAVNEAGYGEPSSPSTAVSAQVEAPF 1955
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 100/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 66 LVLTCLAEGSWPLEFKWMHN----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 113
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ A + I + P+P+ W
Sbjct: 114 VVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI----TSYPRPQVTW 169
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + DSG Y A N + I +
Sbjct: 170 FREGHKIIPSNRIAITLENQLVILATTTSDSGAYYVQAVNEKNGENKTSPFIHLSIARDV 229
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A L C A+ + D++ W NGVRI
Sbjct: 230 GTPETMAPTIVVPPGNRSVVAGSSETTLECIANARPVEDLSVTWKRNGVRI--------- 280
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 281 TSGLHSFGRRLTISNPTSADTGPYVC 306
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1436 VPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1493
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1494 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1543
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 444
+ I W+P E N Y+I++R+ + + +++TLK +
Sbjct: 1544 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKT 1603
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1604 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1646
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1624 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1682
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VV++ + +T+Y V + A N G GP
Sbjct: 1683 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVKLKNLTSHTKYLVSISAFNAAGDGPR 1740
Query: 477 SE 478
S+
Sbjct: 1741 SD 1742
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 36/218 (16%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--- 335
PG P + + + SAT+Q+ G I+ + + + IG E
Sbjct: 1021 PGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG-----------AIGDEEEW 1069
Query: 336 VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391
V Y E + + L P++ Y F++ N +G S S T P AP+
Sbjct: 1070 VTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPT 1129
Query: 392 RIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIA 448
+ L + W PL + N ++ Y+I +WR ++ QS L + +
Sbjct: 1130 SVTVRTASETSLRLRWVPLQDSQYNGNPESVGYRIKYWR----SDLQSSALAQ-----VV 1180
Query: 449 VVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
R+ EF + EYE+++QA N VG GP SEVV
Sbjct: 1181 SDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVV 1218
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 18/238 (7%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1301 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1360
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1361 GYQIXYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1412
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1413 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELP 1471
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
E+Q+ + VV F T Y+++++A ND+G E+E VT D
Sbjct: 1472 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQD 1527
>gi|332864595|ref|XP_518946.3| PREDICTED: protein sidekick-1 [Pan troglodytes]
Length = 2213
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 201/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 408 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 462
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP++ T +G + C APKP WK++ +I+
Sbjct: 463 EGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEVSGAPKPAITWKRENHIL 520
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 521 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHP- 579
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + L C A + + + Y+W + V + + + + DG LL I+
Sbjct: 580 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-IS 635
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + H + + W
Sbjct: 636 QTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNSSHSHAVVLSWVRPFD 695
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI +Y I+ + NS W V +G E+ T + L P TY+F+V A
Sbjct: 696 GNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGIT-------VSGLTPARTYQFRVCAV 746
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 747 NEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 806
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 807 RYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 861
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 105/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 309 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 358
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y C A + + ++A L ++ P F P ES A V I C P P
Sbjct: 359 PYVCEAALRGSAFEPARATAFLFIIE-PPYFTAEP-ESRISAEVEETVDIGCQAMGVPLP 416
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 417 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 476
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 477 NIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 532
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 533 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 570
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 100/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+ +SE + +Y I +++ L D Y+C
Sbjct: 122 LVLTCLAEGSWPLEFKWMRD----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 169
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ A + I + P+P+ W
Sbjct: 170 VVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI----TSYPRPQVTW 225
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I +
Sbjct: 226 FREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIHLSIARDV 285
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A L C A + D++ W NGVRI
Sbjct: 286 GTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI--------- 336
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 337 TSGLHSFGRRLTISNPTSADTGPYVC 362
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1542
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 444
+ I W+P E N Y+I++R+ K+ ++E + +
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKT 1652
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1695
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1673 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1731
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP
Sbjct: 1732 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1789
Query: 477 SE 478
S+
Sbjct: 1790 SD 1791
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 314
V + + T +T+ PP LPG + + + SAT+Q+ G I+ + +
Sbjct: 1046 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1105
Query: 315 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 367
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1106 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1154
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 424
G S S T P AP+ + L + W PLP + N ++ Y+I
Sbjct: 1155 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1214
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 478
+WR ++ QS + + + R+ EF + EYE+++QA N VG GP SE
Sbjct: 1215 YWR----SDLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1265
Query: 479 VV 480
VV
Sbjct: 1266 VV 1267
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 18/238 (7%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1350 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1409
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1410 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1461
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1462 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1520
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
E+Q+ + VV F T Y+++++A ND+G E+E VT D
Sbjct: 1521 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQD 1576
>gi|354497879|ref|XP_003511045.1| PREDICTED: contactin-1, partial [Cricetulus griseus]
Length = 528
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 164/345 (47%), Gaps = 36/345 (10%)
Query: 138 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 197
I+E+G+L I+ ++R+D G+Y+C A N G S G L++ A
Sbjct: 3 IWEDGSLEINNITRNDGGVYTCFAENNRGKANSTGTLVI-------------TKCAETHG 49
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
L L C V + +R+ +D N G L I NA AG Y
Sbjct: 50 LHLLCKR------SVNHQAPQPLLRVETLDAN-----------GELLIRNAQLKHAGRYT 92
Query: 258 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 317
C ++ V S ++V GPPG PGG+++ ++ TS + W+ G+ N PI+ Y I +
Sbjct: 93 CTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTK 152
Query: 318 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 377
T + W + + G EA+ L+PW YEF+V+A N LG GEPS PS
Sbjct: 153 TILSDDWKDAK-----TDPPIIEGNMEAAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSN 207
Query: 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 437
+ T P APS +GGGGG +L+I+W PL RE N Y + ++ + E++
Sbjct: 208 RIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKV 267
Query: 438 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
T+ + G V + + T ++VKV+A N+ G GP S + I
Sbjct: 268 TVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYSLIAVI 311
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390
V + RY + E + P + ++ KV A N G G P S N+ D P +AP
Sbjct: 269 VTNPDTGRYVHKDE-----TMTPSTAFQVKVKAFNNKGDG-PYSLIAVINSAQDAPSEAP 322
Query: 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 450
+ +G ++S+ W+ + + + I Y K+ T +EY
Sbjct: 323 TEVGVKVLSSSEISVHWKHVLEKIVESYQIRYWAAHDKEAAAHRVQVTSQEYS------A 376
Query: 451 RIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
R+ + T+Y ++V A N G GP S+V+
Sbjct: 377 RLENLLPDTQYFIEVGACNSAGCGPSSDVI 406
>gi|296192587|ref|XP_002744137.1| PREDICTED: protein sidekick-1 [Callithrix jacchus]
Length = 2093
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 200/482 (41%), Gaps = 39/482 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ ++ L++ + L I+ L+PE D ++QC A N
Sbjct: 334 CRAMGVPLPTLQWYKDAVSISK----LQNPRYKVLASGGLRIQKLHPE-DSGIFQCFASN 388
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F ++P ++T +G + C APKP WK++ +I+
Sbjct: 389 EGGEIQTHTYLDVTNIAPVFTQQP--ADTTVTDGMTAILRCEVSGAPKPAITWKRENHIL 446
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 447 ASGSVRIPRFMLLESGGLQITPVFIQDAGNYTCYAANTEGSLNASAMLTVWNRTSIVHP- 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + LRC A + + + Y+W + V + + + + DG LL I+
Sbjct: 506 PEDHVVIKGTTATLRCGAMHDPRVSLRYVWKKDNVVLTPSSTSRI---MVEKDGSLL-IS 561
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + H + + W
Sbjct: 562 QTWSGDIGDYTCDIVSEGGNDSRMARLEVIELPHSPQNLLASPNSSHSHAVALSWVRPFD 621
Query: 305 NGRPITHYKIIARTNWNSTW----FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
PI +Y I+ + NS W NV + G V L P TY+F+
Sbjct: 622 GNSPILYY-IVELSENNSPWKVHLSNVDPEMTGVTVSG------------LTPARTYQFR 668
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A NE+G G+ S+ + + P + P P I G + + W+P P + N
Sbjct: 669 VCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLR 728
Query: 421 YYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R E+Q + + + + +T+YE++V A N G G S
Sbjct: 729 GYILRYRLAGLPGEYQQRNIT---SPEVNYCLVMDLIIWTQYEIQVAAYNGAGLGVFSRA 785
Query: 480 VT 481
VT
Sbjct: 786 VT 787
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1825 AEGSPGSPRDVLVTK-SASELTLQWTEGHAGDTPTTGYVIEARPSDEGLW-----DMFVK 1878
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 376
++ R S++ L TYEF+V+A NE GYGEPSSPS
Sbjct: 1879 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSSPS 1919
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W + +SE + +Y I +++ L D Y+C
Sbjct: 48 LVLTCLAEGSWPLEFKWMHD----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 95
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S + + +R S+ +A + I + P+P+ W
Sbjct: 96 VVRNRMGALLQRKSEVHVAYMGNFMDTDQRKTVSQGHAAILNLLPI----TSYPRPQVTW 151
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I +
Sbjct: 152 FREGHKIIPSNRIAITLENQLVILATTPSDTGAYYVQAVNEKNGENKTSPFIHLSIARDI 211
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A L C A + +++ W NGVRI
Sbjct: 212 GTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEELSVTWKRNGVRI--------- 262
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 263 TSGLHNFGRRLTISNPTSADTGLYVC 288
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 83/219 (37%), Gaps = 28/219 (12%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
V EV S +QW G+ PI ++ + R W S + +
Sbjct: 1411 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTFSSSI--------SHEAT 1462
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
A I L P+++Y+ ++ A N++G + SS + T D P + P + +
Sbjct: 1463 ACIVERLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1522
Query: 405 ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGNVGIA 448
I W+P E N Y+I++R+ K+ ++E + + V +
Sbjct: 1523 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKTVNSS 1582
Query: 449 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
E Y YEV + A N +G P S V ++
Sbjct: 1583 STSTMCELTHLKKYRRYEVIMTAYNIIGESPASTPVEVF 1621
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 981 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1036
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1037 -------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSS 1089
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 433
T P AP+ + L + W PLP + N ++ Y+I +WR ++
Sbjct: 1090 RVIQTLQAPPDVAPASVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SD 1145
Query: 434 FQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
QS L + + R+ EF + EYE+++QA N VG GP SEVV
Sbjct: 1146 VQSSVLAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVV 1193
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1599 YEVIMTAYNIIGESPASTPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1657
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E K + VVR+ + +T+Y V + A N G GP
Sbjct: 1658 GNIQGYKIYYWEA-DSQNETEKTKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1715
Query: 477 SE 478
S+
Sbjct: 1716 SD 1717
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 24/241 (9%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1276 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1335
Query: 311 HYKIIARTNWNSTW-FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 369
Y+I R +S F E +G V ++T L P S Y F++ A G+
Sbjct: 1336 GYQIAYRLASSSPHTFTTVE--VGATVRQFTATD-------LAPESAYIFRLSAKTRQGW 1386
Query: 370 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429
GEP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1387 GEPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVREL 1445
Query: 430 NDTEFQ--SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWH 484
E+Q S ++ I P +T Y+++++A ND+G E+E VT
Sbjct: 1446 PRGEWQTFSSSISHEATACIVERLRP----FTSYKLRLKATNDIGDSDFSSETEAVTTLQ 1501
Query: 485 D 485
D
Sbjct: 1502 D 1502
>gi|326928941|ref|XP_003210631.1| PREDICTED: protein sidekick-1-like, partial [Meleagris gallopavo]
Length = 2091
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 201/485 (41%), Gaps = 31/485 (6%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D+ C+A GVP + W+++ L+ L++ + L I L P+ D +
Sbjct: 336 EKDVDILCQAMGVPIPSLVWYKDSIPLSK----LQNPRYKVLLSGGLRIHALRPQ-DAGI 390
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+QC A N+ + L V +KP+F + P +T EG + C APKP W
Sbjct: 391 FQCFASNKAGEIQTYTYLDVTNIKPAFIQPP--EDTTVTEGMTAMLTCEVSGAPKPAISW 448
Query: 124 KKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
KK I+ SG R + E+G L I+PV D+G Y+C A N G + L V +
Sbjct: 449 KKGNQILASGSVQIPRFILLESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTVWNR 508
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
++ P T+ LRC A + + + Y+W + V I + + + D
Sbjct: 509 -TFIVHPPENSTVIKGTTATLRCEATHDPRISIRYVWKKDSVVINPSSSSRI---TVEKD 564
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATI 297
G LL I+ D G+Y C V S G S + V P P + + + S +
Sbjct: 565 GTLL-ISQTWSGDIGDYTCEVISFGGNDSRMARLEVIELPHSPQNLLAILNSSYSRSVVL 623
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W P+ +Y + N NS W + + + + L P TY
Sbjct: 624 SWVRPFDGNSPVLYYMVEVSEN-NSPW--------KVHLSNLDPKMTSVTVSGLTPARTY 674
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+V A N++G G+ SS + + P + P P I G + + W+P P + N
Sbjct: 675 QFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPESEHNG 734
Query: 418 PNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R E+Q K + I + +T+YE++V + N G G
Sbjct: 735 VLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLVTDLIIWTQYEIQVASYNGAGLGAF 791
Query: 477 SEVVT 481
S VT
Sbjct: 792 SRPVT 796
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 115/306 (37%), Gaps = 45/306 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I D YQC
Sbjct: 57 LVLTCLAEGSWPLEFKWLHN----DSEITTYSSEYKYIIP--------ALQRSDAGFYQC 104
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +F + GE V F + + P+P+ W
Sbjct: 105 IVRNRMGALLQRRSEVQVAYMG---NFMDTNQKKTVTEGEAA-VLNFMHIFSYPRPQVTW 160
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+DG+ I R I L+I S D+G Y A N + LI L S
Sbjct: 161 FRDGHKIIPSSRIAITLENQLVILATSVVDAGDYYVQAVNEKNGENKTSPLIHLSVASAM 220
Query: 184 EQ---------LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ +PP+ T +A + L C A + ++ +W NG++I
Sbjct: 221 DPSDTTAPIIVIPPQNTSVVAGSSEVTLECVASARPVERLSIMWKRNGIKI--------- 271
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL---PGGVQ 286
T I+ G L ITN + AD G Y C K ST K + + PP P V
Sbjct: 272 TSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMEPPYFTVEPESVI 331
Query: 287 VVEVHK 292
+ EV K
Sbjct: 332 LAEVEK 337
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 9/220 (4%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
D MY C AK + T + ++L P F P ES A +V I C P
Sbjct: 291 DVGMYFCEAKLRDSTEEPARAKAFISLMEPPYFTVEP-ESVILAEVEKDVDILCQAMGVP 349
Query: 118 KPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
P VW KD + R K+ +G L I + D+GI+ C A+N G ++ L
Sbjct: 350 IPSLVWYKDSIPLSKLQNPRYKVLLSGGLRIHALRPQDAGIFQCFASNKAGEIQTYTYLD 409
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
V + + Q P T+ L C +++ + + G++ +
Sbjct: 410 VTNIKPAFIQPPEDTTVTEGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRF---- 465
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I ++ G L+IT DAG Y C ++ G ++ + V
Sbjct: 466 ILLESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTV 505
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 274 IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
+ GP G PG Q + V K+++ T+QWT+G + +P T Y I AR + W
Sbjct: 1814 VTAGPAEGSPGSPQEILVTKSASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLW-----D 1868
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 376
+ K++ R S++ L TYEF+V+A NE GYGEPS PS
Sbjct: 1869 MFVKDIPRSATSYTVSLDK-LKQGVTYEFRVVAVNEFGYGEPSVPS 1913
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
E V EVD + + N L P++ Y F++ N +G S PS T P
Sbjct: 1037 EWVSLHEVDNEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDV 1095
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNV 445
APS + L + W PLP + N ++ Y+I FWR + Q L + N
Sbjct: 1096 APSSVSVRTASESSLQMRWVPLPDTQYNGNPESVGYRIKFWR----VDLQPSALLKVIND 1151
Query: 446 GIAV-VRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ I +TEYE+++QA N +G GP SEVV
Sbjct: 1152 RLERECTIEDLEEWTEYELQIQAFNAIGAGPWSEVV 1187
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 25/254 (9%)
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI--VEGPPGL-PGGVQVVEVHKT 293
D +LE+ N + + + VG +S + VI ++ PP + P V V ++
Sbjct: 1049 DAQMLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPSSVSVRTASES 1108
Query: 294 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
S ++W D NG P + Y+I R + + VI ++R E +IE
Sbjct: 1109 SLQMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSAL---LKVINDRLER-----ECTIE 1160
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L W+ YE ++ A N +G G P S + T P P + + ++W
Sbjct: 1161 D-LEEWTEYELQIQAFNAIGAG-PWSEVVRGRTRESVPSAPPENVSAEAVSSTQILLTWS 1218
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+P +QN + YKI ++ K+ D+E +S+T++ GN + + + Y YE++V A
Sbjct: 1219 AVPESEQNGLILGYKILYKAKDLDSEPRSQTVR--GNHTQSCL-LSGLRKYVLYEIRVLA 1275
Query: 468 INDVGPG-PESEVV 480
+G G P S V
Sbjct: 1276 FTRIGDGVPSSPAV 1289
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 83/215 (38%), Gaps = 28/215 (13%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+V S + W G+ PI ++ + R + W S + + + I
Sbjct: 1409 DVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPDGDWQTYSSSI--------SHEATSCII 1460
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+++Y+ +V A N++G + S+ + T D P + P + + + W+
Sbjct: 1461 ESLNPFTSYKLRVKATNDIGDSDFSAETEAVTTLQDVPDEPPGSVLVTPHTTSSVLVQWQ 1520
Query: 409 PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GNVGIA 448
P E N + Y+I++R+ +N + ++E + + +
Sbjct: 1521 PPKAESLNGLLLGYRIYYRELDYDAGSATESKAVRNPSALRAELTPQSSFKTVNSSSALT 1580
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ Y YEV + A N +G P S V ++
Sbjct: 1581 TYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVF 1615
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L + YE + A N +G S+P + A P AP I L ++W+P
Sbjct: 1587 LKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEA-APAMAPQNIQVNSLSASQLELTWDPP 1645
Query: 411 PREKQNAPNIYYKIFWRK---KNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
P + QN YKI++ + +NDTE F ET VR+ + +T Y
Sbjct: 1646 PADSQNGNIQGYKIYYWESDVQNDTEKVKVLFLPET----------TVRLKNLTSHTRYL 1695
Query: 463 VKVQAINDVGPGPES 477
V + A N G GP S
Sbjct: 1696 VCISAFNAAGDGPRS 1710
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 16/211 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1298 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVE--VGSTVR 1355
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++T L P S Y F+ A G+GEP + + P P ++
Sbjct: 1356 QFTATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKREAP-GPPQQLTTPQ 1407
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ S+ +P ++P Y+ + R+ D ++Q+ + ++ + F
Sbjct: 1408 SDVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPDGDWQTYSSSISHEATSCIIESLNPF- 1466
Query: 458 YTEYEVKVQAINDVGP---GPESEVVTIWHD 485
T Y+++V+A ND+G E+E VT D
Sbjct: 1467 -TSYKLRVKATNDIGDSDFSAETEAVTTLQD 1496
>gi|291244142|ref|XP_002741959.1| PREDICTED: sidekick 2-like [Saccoglossus kowalevskii]
Length = 2107
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 200/493 (40%), Gaps = 47/493 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAK 69
C+A GVP+ Y W++NG ++ TL +R+ + L I L+ E D AM+QC A
Sbjct: 336 CKASGVPEPMYKWYQNG--IDVSTL---GNNRFIVLSTGSLQITSLHAE-DQAMFQCFAS 389
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + S L+V L P+ P ++ AG + C +P P +WKKD +
Sbjct: 390 NVVADISVSTWLQVERLAPNITNPPNDTSVLAGSTAR--LHCGYSGSPAPDVIWKKDDTV 447
Query: 130 IGS-------------GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+G + NG+L+IS DSG+Y+CT N + L V
Sbjct: 448 VGRWNGSGSGLGIIPVSSTINVMSNGDLIISTAKVADSGLYTCTVVNNVASVTASATLTV 507
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P + + +C + + V +W N V I DL+ ++
Sbjct: 508 -QVKTRISDPPKDMEVIKGSTGIFQCGVLHDSNVAVRILWLMNNVEI---DLSSSNRISV 563
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV--HKTS 294
DG L +I A D G Y C V S G + +++V P P + V + S
Sbjct: 564 LYDGSL-KIAGARSDDIGNYTCTVTSPGGNDARTASLVVIELPFAPQFLHAVLSIDQRRS 622
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV---- 350
+QW + + I YK+ + N W + +V +EN+
Sbjct: 623 IDLQWLESFDGNKAILRYKVFRKENAEIVWTLIMSNV------------APGVENIVTIP 670
Query: 351 -LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P Y F V A NELG G S PS P + P AP + + I W+
Sbjct: 671 DLTPSYQYAFAVSAVNELGEGPLSDPSNNVTLPVEPPDAAPQGVVASPRSSSSIRIQWQA 730
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
P++K N P Y+I +R K + + ++ N + + YE+++ A N
Sbjct: 731 PPQDKWNGPLTGYRIRYRLKGYSS-SPYSYQDIYNPQQQSYELTDLITWDTYEIQIAANN 789
Query: 470 DVGPGPESEVVTI 482
+GPG S V+ +
Sbjct: 790 SMGPGVYSLVIIV 802
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 27/240 (11%)
Query: 256 YECVVKST--VGKISTKTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPI 309
YE +V ++ +G T + I G PP LP V + V S IQ+T G I
Sbjct: 982 YEIMVSASTQMGAGPTVVSTISSGVPPELPTNPVNVVISNVQARSVNIQFTPGYNGKTSI 1041
Query: 310 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 369
+K+ A+ N W EH + + L+P++ Y +V A N +G
Sbjct: 1042 NTWKVEAQINGAEQWVTHYEH--------HDPDALGFVVPDLLPYTKYILRVTAINVVGA 1093
Query: 370 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429
PS P+ ++ T D P AP+ + L+ISW PL RE+ N + Y++ WR K
Sbjct: 1094 SHPSDPTSEFETLQDYPSTAPASVTVRANSETSLTISWIPLTREQWNGVPLGYRVSWRSK 1153
Query: 430 --------NDTEFQSETLKEYGNVG-IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ FQS + +Y +G V+ E+ + YEVKV A N G GP S+++
Sbjct: 1154 PTVVKRSLSNGYFQSVNIDDY--IGRTYVIEDLEEWMW--YEVKVLAYNAKGNGPYSDII 1209
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 106/269 (39%), Gaps = 43/269 (15%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T TC A G P + Y W + G S+ P+ Y +NV T D Y C
Sbjct: 53 TLTCTASGSPPIKYQW-KKGSSYVSQPSPVS----YHPLNNVDTF-------DSGEYYCV 100
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-----PEAAPKPKFV 122
N + + SSA + + ++ P AG ++ + C P+++P
Sbjct: 101 VSNPVGSVISSAAVVQVAYIREYQGGPTTFSVNAGY--SIELECPQLDTLPDSSPDFHLT 158
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVLHG 179
WKKD N +GG I + L+I S + G Y C+A N +GM ES + ++G
Sbjct: 159 WKKD-NFPINGGNVVISLDHKLVILSASESNEGQYHCSALNTVVGNGMRESPTINLYVNG 217
Query: 180 --PSYYEQ---LPPKITIAAHRN--LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
PS +PPK T+ + +QL C A L +W NG+ I
Sbjct: 218 NRPSSVGPRIIVPPKDTVFTQGDPTVQLECIASATPLDLKITLWKRNGMTISQ------- 270
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVK 261
L + N S D G YEC V
Sbjct: 271 ------SANKLILFNPSSIDEGVYECEVS 293
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 55 LNPER-DPAMYQCRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFC 111
NP D +Y+C Q + S ++++ P + P+ + T + I C
Sbjct: 278 FNPSSIDEGVYECEVSLQYHSYSSVRATATISMRTEPVWMLSPV-AVTTGDVNEPIEIPC 336
Query: 112 NPEAAPKPKFVWKKDGNIIGSGGRRK--IFENGNLLISPVSRDDSGIYSCTATNVHGMDE 169
P+P + W ++G + + G + + G+L I+ + +D ++ C A+NV
Sbjct: 337 KASGVPEPMYKWYQNGIDVSTLGNNRFIVLSTGSLQITSLHAEDQAMFQCFASNVVADIS 396
Query: 170 SKGRLIVLHGPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLDVAYI------- 215
L V E+L P IT + A +L C DV +
Sbjct: 397 VSTWLQV-------ERLAPNITNPPNDTSVLAGSTARLHCGYSGSPAPDVIWKKDDTVVG 449
Query: 216 -WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
W +G +G + ++ T N+ +G L+ I+ A AD+G Y C V + V ++ T+
Sbjct: 450 RWNGSGSGLGIIPVS--STINVMSNGDLI-ISTAKVADSGLYTCTVVNNVASVTASATLT 506
Query: 275 VE 276
V+
Sbjct: 507 VQ 508
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 27/229 (11%)
Query: 268 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNW 320
S T + + P P V+ TS + W +G NG I YKI+ + ++
Sbjct: 1484 SEPITTLQDFPEDSPTITDVIPYTATSLRVIWRPPASEDINGILNGFKI-QYKILRQISY 1542
Query: 321 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 380
EHVI R + SI + YE + N +G G PS+P Y
Sbjct: 1543 -------MEHVISDTRLRQFDLTDLSI------YENYEIVMRVFNIIGEGPPSAPYTIYV 1589
Query: 381 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND----TEFQS 436
A P AP + + ++W+ P QN YKIF+ K +D + +
Sbjct: 1590 GEA-IPTAAPDDVSAVPIGPTQIRVTWKEPPENTQNGGLQGYKIFYWKVSDEGDNIDNEH 1648
Query: 437 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHD 485
+ ++ G V + V + YT Y+++V N G GP+S V+ + D
Sbjct: 1649 QMMRPVG-VELTEVLLDQLVSYTNYKIQVLGFNAAGDGPKSAVIRVRTD 1696
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L P+STY+F+V A N++G S PS T D P +P+ L + W P
Sbjct: 1459 LSPYSTYQFRVQAHNDVGASYYSIPSEPITTLQDFPEDSPTITDVIPYTATSLRVIWRPP 1518
Query: 411 PREK----QNAPNIYYKIFWRKKNDTEFQSET-LKEYGNVGIAVVRIPSEFYYTEYEVKV 465
E N I YKI + S+T L+++ +++ Y YE+ +
Sbjct: 1519 ASEDINGILNGFKIQYKILRQISYMEHVISDTRLRQFDLTDLSI--------YENYEIVM 1570
Query: 466 QAINDVGPGPESEVVTIW 483
+ N +G GP S TI+
Sbjct: 1571 RVFNIIGEGPPSAPYTIY 1588
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 14/213 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
E PG G+ V + A +QW D +T +KI + + ++ + G E
Sbjct: 1318 EDVPGPVTGILFPNVSNSYAKVQWEDPPERNGILTKFKISYKLMSDD-----AQIIDGTE 1372
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
+D T EAS N YEF + A LG+GEP+ D P Q+P +
Sbjct: 1373 LDINTHSYEASNLNAQ---EYYEFTISAATRLGWGEPAVALVLTVNNRDPP-QSPFGLIV 1428
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 455
+ SI+ N+P Y+ I + +F+ ++ + +VG + IPSE
Sbjct: 1429 DRQLVFSRSIALLWSRGSDGNSPIRYFTIQLSPYSTYQFR---VQAHNDVGASYYSIPSE 1485
Query: 456 FYYT--EYEVKVQAINDVGPGPESEVVTIWHDP 486
T ++ I DV P + + IW P
Sbjct: 1486 PITTLQDFPEDSPTITDVIPYTATSLRVIWRPP 1518
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 82/212 (38%), Gaps = 23/212 (10%)
Query: 278 PPGLPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSE----- 329
P P V V +TS TI W T NG P+ + R +W S V
Sbjct: 1110 PSTAPASVTVRANSETSLTISWIPLTREQWNGVPLGY-----RVSWRSKPTVVKRSLSNG 1164
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
+ +D Y GR IE+ L W YE KV+A N G G P S + T P
Sbjct: 1165 YFQSVNIDDYIGRTYV-IED-LEEWMWYEVKVLAYNAKGNG-PYSDIIEERTGDSVPSAG 1221
Query: 390 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV---G 446
P + + I+W +P+ QN + YK+ + + F EY ++
Sbjct: 1222 PQNVVAVSTGSTTIDIAWVDIPQSDQNGEILGYKVLYCES----FADVDSCEYYDITDNS 1277
Query: 447 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
R+ + Y Y+++V +G G SE
Sbjct: 1278 SRSTRLSNLKKYVTYDIQVLGYTRIGNGVLSE 1309
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 17/184 (9%)
Query: 84 LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN 143
+ + P+ ++P + E G T+ C +P K+ WKK + + N
Sbjct: 31 VLVPPNIYQQP--QDRLIAESGAATLTCTASGSPPIKYQWKKGSSYVSQPSPVSYHPLNN 88
Query: 144 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC- 202
V DSG Y C +N G S ++ + Y+ P ++ A +++L C
Sbjct: 89 -----VDTFDSGEYYCVVSNPVGSVISSAAVVQVAYIREYQGGPTTFSVNAGYSIELECP 143
Query: 203 --SAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ D W + I ++ I++D L+ I +AS ++ G+Y C
Sbjct: 144 QLDTLPDSSPDFHLTWKKDNFPINGGNV------VISLDHKLV-ILSASESNEGQYHCSA 196
Query: 261 KSTV 264
+TV
Sbjct: 197 LNTV 200
>gi|62024162|gb|AAH66363.1| SDK2 protein, partial [Homo sapiens]
Length = 1805
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 187/434 (43%), Gaps = 32/434 (7%)
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
D M+QC A+N +S L V ++ P+ + PL+S +G +V + C AP+P
Sbjct: 7 DTGMFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRP 64
Query: 120 KFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W+K I+ SG R E+G+LLISP D+G Y+C ATN G+DE+ L+
Sbjct: 65 AITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLV 124
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
V + + P ++ + C + + + YIW +G +G P
Sbjct: 125 VW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPR 178
Query: 236 INID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHK 292
I +D G L I+ D G Y C V S G S + V P P + V +
Sbjct: 179 IRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVER 238
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+ + WT P+ Y I+ + N+ W V+ VD + + LV
Sbjct: 239 RAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLV 289
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P +Y+F++ A N++G G+ S + + + P + P P + G + I W+P P
Sbjct: 290 PARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPE 349
Query: 413 EKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
QN Y I + +F++ T + N+ + + I +T YE++V A N
Sbjct: 350 SHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYN 404
Query: 470 DVGPGPESEVVTIW 483
G G S VT W
Sbjct: 405 SAGLGVYSSKVTEW 418
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 56 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 112
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 113 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 169
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 170 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 229
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 230 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 279
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 280 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 339
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 340 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 388
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 389 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 447
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 448 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 507
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 508 TTPGDGPRS 516
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 39/282 (13%)
Query: 220 GVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273
G RI + N T PN+ ++ +T + E ++ G+ +
Sbjct: 560 GYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 616
Query: 274 IVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFN 326
I G PP LPG + + + S T+Q+ G I+ + + A+ W
Sbjct: 617 ISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLL 676
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
+ H + E D + + + L P++ Y F++ N +G PS PS + T P
Sbjct: 677 I--HQLSNEPDA----RSMEVPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPP 729
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGN 444
AP+ + L + W PLP + N ++ YKI K + ++ +TL
Sbjct: 730 DMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH--- 783
Query: 445 VGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ ++ +TEY V+VQA N +G GP S+ V
Sbjct: 784 --VVQDRVERDYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 823
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1465 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1521
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1522 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1555
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1228 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1286
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1287 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1341
Query: 474 GPES 477
GP S
Sbjct: 1342 GPRS 1345
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1035 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1093
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1094 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1141
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + L+ N G +
Sbjct: 1142 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFMLRGINNPGATWAELT 1201
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1202 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1244
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 934 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 992
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 993 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1044
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1045 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1102
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1103 --TSYKFRVKATNDIG 1116
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 725 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 782
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 783 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 834
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 835 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 893
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 894 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 922
>gi|190336629|gb|AAI62464.1| Neural adhesion molecule L1.2 [Danio rerio]
Length = 1271
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 216/473 (45%), Gaps = 29/473 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G+P +W NG LL+ ++ R ++ VLT++ + D A++QC+A +
Sbjct: 368 CKADGIPKPEVTWSINGILLSD----IDPDPRRSVKHGVLTLKNVE-LSDTAVFQCKAAS 422
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAAPKPKFVWKKDG-N 128
+ + +A + V+ L P + Y+ EG + C +P+P W+ +
Sbjct: 423 KHGSVLINAYVYVIELPPQILTE--DGLMYSVAEGQTTELACETFGSPRPNVTWEGESWG 480
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ + R +G+L IS S +DSG Y+CT N ++ L VL+ + + P
Sbjct: 481 ALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNNSKITITAE--LDVLNK-TVIVKPPL 537
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ I + L C + D+ + W N ++ ++ ID L I
Sbjct: 538 ALRIQRGKPATLTCEYQVDSRQDLPQVQWRKNMQKLTESS----DSDKYMIDESTLIIPE 593
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
D G Y C V +T+ ++ + P P +Q+ E + T+ WT GA +
Sbjct: 594 VEEEDEGIYTCEVITTLDMAKASGSITIVDRPDPPSLIQMTEPKERRVTLSWTPGADHNS 653
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
P+ Y I + T + E +E+ R +G + + L P+ +Y F+VI+ NE+
Sbjct: 654 PVLEYLI----EFEETGSDRKEW---EELSRVSGSSQRATLP-LKPFISYRFRVISINEI 705
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G +PS + Y+TPA P P + + G L I+W+ + R N P+ +YK+ WR
Sbjct: 706 GKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRSFNGPDFHYKVMWR 765
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
K + T K+ + V + + ++ +++KVQA+N++G GPE + +
Sbjct: 766 KVLGSGPSWHT-KDITSPPFVVTDVGN---FSAFDIKVQAVNEMGEGPEPKSI 814
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 9/223 (4%)
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKP 119
P+ + K +K SS+ V +P + S +Y G N+ + C + P P
Sbjct: 227 PSARVIKLKEPIKLTVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSP 286
Query: 120 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W + ++ K + L +S D G Y CTATN GM R+ V
Sbjct: 287 SIQWIRKDGVLSESRTTKDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAA 346
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
P Y+ + P A ++L C A +V W+ NG+ + ++D + P ++
Sbjct: 347 P-YWIKEPKSQLYAPGETVKLECKADGIPKPEVT--WSINGILLSDIDPD----PRRSVK 399
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
G+L + N +D ++C S G + V ++E PP +
Sbjct: 400 HGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQI 442
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 117/297 (39%), Gaps = 40/297 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNPERDPA 62
D+T TC+A G P T+ W ++G E P +D D +D+ LT + +
Sbjct: 68 DITLTCDATGNPPPTFRWVKDG----VEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQG 123
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKF 121
Y C A N+L T S+ V P+ +K + ++ EG +V + CN P P
Sbjct: 124 RYNCYASNELGTAVSNEARIVTENTPTLQKEKIITKKVE-EGESVVLPCNPPNGTVAPVI 182
Query: 122 VW-KKDGNIIGSGGRRKIFENGNLLISPV----SRDDSGIYSCT----ATNVHGMDESKG 172
W K I R +GNL S SRDD Y+C + V + E
Sbjct: 183 HWMDKKLRHIQQNERVIQGRDGNLYFSHATVADSRDD---YTCNIQFPSARVIKLKEPI- 238
Query: 173 RLIVLHGPSYYEQLPPKIT----------IAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
+L V S P++ + + +NL+L C + +I +GV
Sbjct: 239 KLTVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWI-RKDGV- 296
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
L+E T + D +L N S D GEY+C + G + V VE P
Sbjct: 297 -----LSESRTTKDSND-RVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAP 347
>gi|432942191|ref|XP_004082977.1| PREDICTED: neuronal cell adhesion molecule-like [Oryzias latipes]
Length = 1264
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 208/482 (43%), Gaps = 62/482 (12%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLE----DQDRYFIQDNVLTIRYLNPERDPAMYQ 65
TC G P SWF NG +P+E D+ R +D V+ A+YQ
Sbjct: 343 TCRVNGSPKPKISWFVNG-------VPIENAAADRSRKVDEDTVIISNVQIGSS--AVYQ 393
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWK 124
C A N+ ++A + VL P P ++ Y C+ +P P W
Sbjct: 394 CNASNEFGYVMANAFVSVLAEPPKMLTPP--NQVYQVITNRPAFLDCSSFGSPIPTISWF 451
Query: 125 KDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KDG I I +G + I ENG L I ++G Y+C ATN GM E+ L V
Sbjct: 452 KDGRISIENGDQYVIHENGTLEIMVAQVLNTGKYTCVATNNLGMRENSVNLEVKEPTRIL 511
Query: 184 EQLPPKITIAAHRNLQLR--CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
EQ PK + R + R C ++ L W + + D + P+ +
Sbjct: 512 EQ--PKYKVV-QRGMSARFDCKVKHDKSLIPIMTWLKDRGELP--DDERYKRPSQGVSQT 566
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
+ C+ + + +T + P P +++ + + S + WT
Sbjct: 567 MT--------------CLF------LHSHSTATLLRKPDPPTDLELTDQAERSVQLTWTP 606
Query: 302 GATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
G N PI + + + + W N++E VD G K + + L P+ Y F
Sbjct: 607 GDENNSPILSFLVQYEDSLHHKGLWVNLTE------VD---GSK-TTTQLELSPYVYYSF 656
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +GY EPS+PS QY T P + PS + G G K ++ ISW PL + N P
Sbjct: 657 RVLARNNVGYSEPSNPSSQYRTNPAAPDENPSNVQGVGTKPDNMVISWMPLTGYQANGPG 716
Query: 420 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ W++++ D + S+ + + + V P+ Y YE+KVQA+ND G GP+ E
Sbjct: 717 LKYKVHWKRRDMDESWSSQNVVDKSQ--LVVDGTPT---YVPYEIKVQALNDYGNGPDPE 771
Query: 479 VV 480
+
Sbjct: 772 IA 773
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 114/276 (41%), Gaps = 22/276 (7%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P SW + G L + + L + + +L I ++ E D Y+C
Sbjct: 250 LQLECIAEGLPTPDVSWQKVGGELPNNRMALHNFGK------ILQISDVS-ESDAGDYRC 302
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN+L + ++ V P + P E G +T C +PKPK W +
Sbjct: 303 TAKNKLGLVHHVIKVAV-KAAPFWISAPKNLILAPNETGILT--CRVNGSPKPKISWFVN 359
Query: 127 GNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
G I + R + + ++IS V S +Y C A+N G + + VL P
Sbjct: 360 GVPIENAAADRSRKVDEDTVIISNVQIGSSAVYQCNASNEFGYVMANAFVSVLAEPPKML 419
Query: 185 QLPPKI-TIAAHRNLQLRCSAHTEELLDVAYIWTHNG-VRIGNMDLNELETPNINIDGGL 242
P ++ + +R L CS+ + ++ W +G + I N D + + G
Sbjct: 420 TPPNQVYQVITNRPAFLDCSSFGSPIPTIS--WFKDGRISIENGDQYVIH------ENGT 471
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
LEI A + G+Y CV + +G + V+ P
Sbjct: 472 LEIMVAQVLNTGKYTCVATNNLGMRENSVNLEVKEP 507
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 120/302 (39%), Gaps = 41/302 (13%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD---NVLTIRYL-- 55
D + + CEA G P ++ W RNG + ++ D + + L I +
Sbjct: 40 FDPREHIIIHCEAKGNPQPSFRWARNGTDFDVKS------DSKIVMNPGSGTLDIDIIGG 93
Query: 56 NPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 115
E YQC A+N+ ++ + + P + K E+ +G + + C P A
Sbjct: 94 KAEAYEGTYQCTAENEHGKALTNKIVIRQSRSPLWPKERNEAMVRQ-KGAPLVLRCQPPA 152
Query: 116 APKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPV----SRDDSGIYSCTATNVHGMDE 169
P ++ D N ++ + NG+L S V +RDD Y C A H
Sbjct: 153 GLPPPVIFWMDNNFQRLQLDERVSQALNGDLYFSNVLPEDARDD---YICYARFPHTQTI 209
Query: 170 SKGR---LIVLHGPSYYEQLP-------PKITIAAHRN--LQLRCSAHTEELLDVAYIWT 217
+ + ++VL E+ P P T + LQL C A DV+ W
Sbjct: 210 QQKQPISVVVLDNNPQGERRPRILLPSEPTSTKMVLKGVLLQLECIAEGLPTPDVS--WQ 267
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
G G + N + N G +L+I++ S +DAG+Y C K+ +G + V V+
Sbjct: 268 KVG---GELPNNRMALHNF---GKILQISDVSESDAGDYRCTAKNKLGLVHHVIKVAVKA 321
Query: 278 PP 279
P
Sbjct: 322 AP 323
>gi|324499966|gb|ADY39998.1| Neuroglian [Ascaris suum]
Length = 1341
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 216/491 (43%), Gaps = 42/491 (8%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTI----RYLNPERDPA 62
+ + C A G P T ++++NG ++ + +D DR+ I +VLT+ + L+ D A
Sbjct: 371 VKFDCSASGKPTPTITFYKNGVEMSKQ----KDGDRWVIDGSVLTLYDVKKGLHGNGDNA 426
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC+A+N+ +++ L +L KP E G VT+FC A+P
Sbjct: 427 VYQCKAENKHGYIWANFYLNLLAFKPQLVNDSGNVEAVIG--SKVTLFCRFFASPIADIT 484
Query: 123 WKKD------GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W+ NII + + + G L+I+ V RD G Y C N + +L+V
Sbjct: 485 WESSVLPGITHNIIPADAQGE----GKLVINSVGRDAEGEYRCIGKNKYDTATGSTKLVV 540
Query: 177 LHGPSY--YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
+E K+ H ++L C A +E L V Y W + + L +
Sbjct: 541 RDATRLEPFESGLEKVLAGHH--IELPCEAQHDENLQVTYEWLVDAKPLSQQHL--MSGH 596
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE----V 290
D L I+N S DA Y CV ++ + + + V+ P + +
Sbjct: 597 YRLTDKNSLVISNPSRYDAANYTCVARTALDSVEKSIEIHVDDVPNPIHAAYIAKCDPTA 656
Query: 291 HKTSATIQWTDGATNGRPI----THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK--- 343
TS ++ + A PI Y+I T+ + W V+ ++ +
Sbjct: 657 QVTSIKFEYMENADFSSPIKEIWAQYQIDEETD-GAVWLTHPHPVLADSLESVENNQRIV 715
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ S+E + P+ Y F+V N+ G G P++ + TPA P + P + G + +L
Sbjct: 716 KGSLEVSMRPFGNYHFRVFGRNDFGDGAPTNVKGECKTPARVPDKNPEGVSAVGSRPENL 775
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKE-YGNVGIAVVRIPSEFYYTEY 461
+ W+P+PRE N + +Y I +R ++ E++ E + + Y + + + +E + Y
Sbjct: 776 IVFWKPMPREDWNGRDFHYIIRYRPSGSNGEWKEEKVDDPYSDR--HTIELSAEEPFRPY 833
Query: 462 EVKVQAINDVG 472
EV+VQA+N+ G
Sbjct: 834 EVQVQAVNEEG 844
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 127/347 (36%), Gaps = 56/347 (16%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLN----SETLPLEDQDRYFIQDNVLTIRYLN 56
+D + T C+A G P Y W +NG+ N S + + F+ LT+
Sbjct: 65 LDYLKERTLRCKAEGNPAPVYKWKKNGKPFNLNMYSNRVAQVPGEGSFVFSK-LTV---- 119
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKR--PLESETYAGEGGNV-TIFCN- 112
D +YQC A N T S +TL+ ++ + E E E G+ C
Sbjct: 120 --ADEGVYQCEATNDNGTAVSEK----ITLQQTWIRYFPQAEPEVVRVELGDAYQRNCTP 173
Query: 113 PEAAPKPKFVWKKDGNIIGS-----GGRRKIFENGNLLISPVSRDD---SGIYSCTATNV 164
PE+ P + W G+ GS E G + V D + Y+CTA N
Sbjct: 174 PESNPAARVYWIFKGDEEGSFDSINSSHISTNELGTIFFHHVKDTDFKPNRYYTCTAENT 233
Query: 165 H----------GMDESKGRLIVLHGP-----SYYEQLPPKITIAAHRNLQLRCSAHTEEL 209
+D + R L P Y Q P L S E
Sbjct: 234 KLKDYKFGSQFRLDVTTNRRRSLSSPIPPTEQYVNQSSPVALQGTIHKLHCFFSGFPEPK 293
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
+ W HNGV I D N G L + N SF AG+Y+C+ + + +
Sbjct: 294 PE----WKHNGVAIAEDD-NRF---TFEAYGKTL-VFNVSFETAGQYQCIFPNHL-DLDR 343
Query: 270 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP---ITHYK 313
K V+VE P P G T+++ D + +G+P IT YK
Sbjct: 344 KFDVVVEAAPYWPSGPPPNTQTSEGETVKF-DCSASGKPTPTITFYK 389
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 13/181 (7%)
Query: 95 LESETYAGEGGNV------TIFCNPEAAPKPKFVWKKDGNIIG----SGGRRKIFENGNL 144
LES T A G N+ T+ C E P P + WKK+G S ++ G+
Sbjct: 54 LES-TQASNGQNLDYLKERTLRCKAEGNPAPVYKWKKNGKPFNLNMYSNRVAQVPGEGSF 112
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
+ S ++ D G+Y C ATN +G S+ + Y+ Q P++ + R
Sbjct: 113 VFSKLTVADEGVYQCEATNDNGTAVSEKITLQQTWIRYFPQAEPEVVRVELGDAYQRNCT 172
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL--EITNASFADAGEYECVVKS 262
E W G G+ D + N G + + + F Y C ++
Sbjct: 173 PPESNPAARVYWIFKGDEEGSFDSINSSHISTNELGTIFFHHVKDTDFKPNRYYTCTAEN 232
Query: 263 T 263
T
Sbjct: 233 T 233
>gi|307186116|gb|EFN71841.1| Down syndrome cell adhesion molecule [Camponotus floridanus]
Length = 1719
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 222/512 (43%), Gaps = 50/512 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++A +T + + +P + SW ++GE L S +L +E++ F NVL + L+ R
Sbjct: 399 SRAQVTCSVTSGDLP-IYISWLKDGEPLPS-SLRIEERGAEFF--NVLVFKELS-SRHSG 453
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N +A+L ++ + P + P E T G NV C + P P
Sbjct: 454 KYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQEVATLLGNPLNV--HCEAKGFPPPHIT 510
Query: 123 WKKDGN---------IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W + + GS GR I NG+L + S D G Y C A N G SK
Sbjct: 511 WLRAKGKMSNDYQPLVDGSDGRLTILPNGSLWTASASPQDEGQYLCRANNGIGSGLSKVI 570
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ +H P+ +E +TI ++ + C+ + ++V W HN R+ +M + L
Sbjct: 571 YVSVHEPARFEFQSENVTIRRGESVTIDCTVIGDNPIEVQ--WMHNSDRL-DMSNHRLSI 627
Query: 234 PNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I D GL L I N+ D+G Y C + G+ + V+ P P G++V+E+
Sbjct: 628 GQIKTDNGLKSQLSIANSDRQDSGVYRCTADNAYGRSEHLIYLAVQERPDPPAGLEVIEI 687
Query: 291 HKTSATIQWTDGATNGRPITHYKIIART-------NWN------------STWFNVSEHV 331
S + W PI +Y I R+ +WN S+ S H
Sbjct: 688 GSRSIRLLWKRAFDGNSPIRNYVIQYRSLSHGMTDDWNPVKTHNVTYTPGSSNSGNSIHP 747
Query: 332 IGKEVDRY--TG-RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
++ + TG +E ++ L P TY F++ A N + P+ P T + P +
Sbjct: 748 TQNDLSPFETTGDDQEVALIGGLHPAVTYTFRIFAINSIDASGPTEPV-VAKTQEEAPTE 806
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---QSETLKEYGNV 445
+P I G+L +SW+P P+E N + Y + W + + + QS++L G
Sbjct: 807 SPQNIKVQPAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSSTSGVNQSKSLTVNG-W 865
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
V++ +T+Y++ ++A N + GP S
Sbjct: 866 ATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 897
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 121/294 (41%), Gaps = 34/294 (11%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ +D+ TC A G P ++W+R+ +N ++P+E R + +++ IR ++ + D
Sbjct: 109 ESGSDVHLTCSAQGSPPPQFTWYRD---VNGHSIPVESFGRIQLWGDLMQIRRVDAQ-DA 164
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y CRA N L + + L V T K + + +P +GE T+ C E P
Sbjct: 165 GRYVCRASNHLGEQRAETHLSV-TSKLNARIQPRVQVVNSGE--TATMNCTVEGYPVESV 221
Query: 122 VWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT----NVHGMDESK-GRL 174
W DG + R ++ L+I V R D G+Y C N E K G
Sbjct: 222 EWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRRDKGMYQCLVRSDKENAQATAELKLGDT 281
Query: 175 IVLHGPSYYEQL----PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ ++ EQ PP + LRCSA ++ W +G + +
Sbjct: 282 VPELQYTFIEQALRPGPP---------VSLRCSATGSP--TPSFTWLLDGEPLSQIATGH 330
Query: 231 LETPNINIDG-----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D L I++A D G Y CV +T+ + K + + GPP
Sbjct: 331 RYAIGQYVDQSGDVISHLNISSAGTEDGGLYACVASNTLATVEHKARLNIYGPP 384
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 25/284 (8%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T C G P + W +G L +D + VL I + RD MYQC
Sbjct: 208 TMNCTVEGYPVESVEWLHDG----VPVLTAQDTRIRLLAPLVLVIGSVG-RRDKGMYQCL 262
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
++ + ++A+L++ P + +E G V++ C+ +P P F W DG
Sbjct: 263 VRSDKENAQATAELKLGDTVPELQYTFIEQALRPGP--PVSLRCSATGSPTPSFTWLLDG 320
Query: 128 ---NIIGSGGRRKIFE----NGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+ I +G R I + +G+++ IS +D G+Y+C A+N E K RL +
Sbjct: 321 EPLSQIATGHRYAIGQYVDQSGDVISHLNISSAGTEDGGLYACVASNTLATVEHKARLNI 380
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPN 235
+GP + Q+ CS + + L + W +G + ++ + E
Sbjct: 381 -YGPPVMTPFSFPPSSQEGSRAQVTCSVTSGD-LPIYISWLKDGEPLPSSLRIEERGAEF 438
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
N+ L S +G+Y CV ++ K++ ++V+ PP
Sbjct: 439 FNV----LVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 478
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 22 SWFRNGELLNSETLP--LEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78
SWFR+ +L LP + R+ + L IR PE A Y C + L +
Sbjct: 24 SWFRDDAIL----LPGNTDTGGRFVVTSQGDLHIRAARPEDGRATYSCLTLHALTSERRR 79
Query: 79 AQLRVLT-------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--- 128
++ LT L P +R E A G +V + C+ + +P P+F W +D N
Sbjct: 80 SEPATLTVTEPTGSLGPRLMQRS-EIAISAESGSDVHLTCSAQGSPPPQFTWYRDVNGHS 138
Query: 129 -IIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ S GR +++ G+L+ I V D+G Y C A+N G ++ L V ++
Sbjct: 139 IPVESFGRIQLW--GDLMQIRRVDAQDAGRYVCRASNHLGEQRAETHLSVTS--KLNARI 194
Query: 187 PPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P++ + + + C+ + V W H+GV + L +T + +L I
Sbjct: 195 QPRVQVVNSGETATMNCTVEGYPVESVE--WLHDGVPV----LTAQDTRIRLLAPLVLVI 248
Query: 246 TNASFADAGEYECVVKS 262
+ D G Y+C+V+S
Sbjct: 249 GSVGRRDKGMYQCLVRS 265
>gi|85682963|gb|ABC73457.1| CG1634 [Drosophila miranda]
Length = 349
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 168/371 (45%), Gaps = 26/371 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
++ + CEA G P+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 2 EVVFQCEAAGFPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIVNLVKSDTGNY 55
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V L P ++ P T +G NVT+ C APKP+ W
Sbjct: 56 GCNATNSLGYVYKDVFLNVQALPPEIEEPPTALSTV--DGRNVTLRCRVTGAPKPQVRWL 113
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++G L V+ +
Sbjct: 114 RATNWL-TGGRYIVQANGDLQILDVTFSDAGQYTCYAENKFGNKSAEGSLTVMEH-TRIT 171
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ + L++ W +G I D E + + + L
Sbjct: 172 QEPQNYEVAAGQSATFRCNEAHDGNLEIEIDWWKDGQPI---DF-EAQPRFVKTNDNSLT 227
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + K +IV+ P P + + A I W
Sbjct: 228 IAKTMELDSGEYTCVARTRLDEATAKANLIVQDVPNAP-KLTGITCQADKAEIMWEPQGD 286
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V + S + PW+ Y F+VIA
Sbjct: 287 NRSPILHYTIQFNTSFTPASWDTAFEKVPNTDF---------SFVVQMSPWANYTFRVIA 337
Query: 364 GNELGYGEPSS 374
N++G +PS+
Sbjct: 338 FNKIGASQPSA 348
>gi|432924655|ref|XP_004080662.1| PREDICTED: protein sidekick-2-like [Oryzias latipes]
Length = 2260
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 204/481 (42%), Gaps = 33/481 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP W+++ ++ P++ + L + L P+ D M+QC A+N
Sbjct: 399 CQARGVPQPDIVWYKDALPID----PVKTPRYRVLVGGSLQVNGLLPD-DTGMFQCFARN 453
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
++ L V ++ P+ P S++ +G +V + C AP+P W+K ++
Sbjct: 454 MAGEVQTNTYLAVTSIAPNITAGP--SDSTVIDGMSVILHCETSGAPRPAITWQKGERVL 511
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C A+N G+DE+ LIV +
Sbjct: 512 ASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASADLIVW-ARTRITTP 570
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEI 245
P +++ + C + + + ++W +G I N P + + G L I
Sbjct: 571 PQDLSVIKGTKAVMTCGVTHDPSVIIRHVWEKDGSVI-----NVQSVPRMQLSADGTLHI 625
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P V + K + + W
Sbjct: 626 SQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPTAVLSKSEKRAIDLAWAKSF 685
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W + ++ + A N L+P +Y+F++ A
Sbjct: 686 DGNSPLIRYILEVSEN-NAPWAILQANIEPEST--------AVTVNGLIPARSYQFRLCA 736
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P +P + G + I W+P QN Y
Sbjct: 737 VNDVGKGQFSKETERVSLPEEPPSASPQNVITSGRTNQSIMIQWQPPQESHQNGILRGYI 796
Query: 424 IFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R ++Q +K + + + + +T YE++V A N G G S VT
Sbjct: 797 VRYRLTGLPVDYQ---IKNISSPDVTTLLLEDLIIWTNYEIEVAAYNGAGLGVFSHKVTE 853
Query: 483 W 483
W
Sbjct: 854 W 854
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 43/284 (15%)
Query: 220 GVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTK 270
G RI + N T PN+ ++ GL +T + AG + S + +
Sbjct: 996 GYRISWEEFNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAG-----MTSKGQGLLSS 1050
Query: 271 TTVIVEGPPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTW 324
+T+ PP LPG + V + S T+ + G I+ + + A+ N W
Sbjct: 1051 STISSGVPPELPGPPTNIVVSNIGPRSVTLLFKPGYDGKTSISRWLVEAQVGAVGENEDW 1110
Query: 325 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 384
VI +V + + N L P++ Y F++ N +G PS PS + T
Sbjct: 1111 ------VIVHQVSNEPEARALEVPN-LNPYTLYRFRMRQVNIVGTSPPSQPSRKIQTLPA 1163
Query: 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQ--NAPNIYYKIFWRKKNDTEFQSETLKEY 442
P AP+ + L + W PLP + NA + Y+I + + + +
Sbjct: 1164 PPDIAPANVTLRTASETSLWLRWMPLPEWEYNGNAEQVGYRIQYYRVGS--------QGH 1215
Query: 443 GNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
G + + R+ EF +TEYEV+VQA+N +G GP S+ V
Sbjct: 1216 GLIHVIADRLEREFTIEDLEEWTEYEVRVQAVNHMGVGPWSQPV 1259
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P+SP + P P + L ++W+P P QN
Sbjct: 1662 YEIRMSVYNAVGEG-PTSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVNAQN 1720
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW ++KN TE ++ + E G V++ + YT Y + V A N G
Sbjct: 1721 GDIQGYKIYFWEFQRKNGTERLRTLFMPEAG------VKLKNLTGYTNYMISVAAFNAAG 1774
Query: 473 PGPES 477
GP S
Sbjct: 1775 DGPRS 1779
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
V + W G+ P+ +Y + R + W V + E Y I
Sbjct: 1481 HVQARQVLLSWEPGSDGLSPVRYYTVQLRELPDKNW-TVHSASVNHEAASY-------IV 1532
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L P+++Y+F++ A N++G E S S T D P +AP + + I W+
Sbjct: 1533 SRLKPFTSYQFRIKATNDIGDSEYSEESEAITTLQDAPDEAPVILSVTPHTTTSVLIRWK 1592
Query: 409 PLPREKQNAPNIYYKIFWRK 428
P EK N + ++I +R+
Sbjct: 1593 PPSEEKINGILLGFRIHYRE 1612
Score = 45.1 bits (105), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 136/396 (34%), Gaps = 75/396 (18%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD---PAM 63
L TC A G + + W N L +L RYL P D
Sbjct: 102 LVLTCMAEGSWPLEFKWIHNNTELTRFSL---------------EYRYLIPSLDRSHAGF 146
Query: 64 YQCRAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C +N+ L R + Q+ + SF++ GEG V + P+P+
Sbjct: 147 YRCIVRNRVGALLQRRTEVQVAFMG---SFEEGERNQSVSQGEGA-VVPAPRIRSFPQPQ 202
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W KDG+ I R I + L+I D+G Y A N + + I L
Sbjct: 203 VTWYKDGHKIPPTSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQPITLSVD 262
Query: 181 SYYE------------QLPPKITIAAHRNLQLRCSAHTEE----------LLDVAYIWTH 218
S LPP + + ++ L+ ++ W
Sbjct: 263 SELPLERRLTPTQNAIDLPPSVRSVIQGQEYASLEKYVQKSYQYISVYRPLIKLSISWRK 322
Query: 219 NGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTV 273
NGV + G D N L I + +DAG YEC + S+V +S +
Sbjct: 323 NGVLVSSGLSDYNR-----------RLTILSPVVSDAGYYECEAVLRSSSVPSVSAGAYL 371
Query: 274 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 333
V PP ++ + H T+ + D R + I+ W+ + +
Sbjct: 372 HVLEPPQF---IKEPDKHITAEMEKVVDIPCQARGVPQPDIV--------WYKDALPIDP 420
Query: 334 KEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 368
+ RY S++ N L+P T F+ A N G
Sbjct: 421 VKTPRYRVLVGGSLQVNGLLPDDTGMFQCFARNMAG 456
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 82/212 (38%), Gaps = 18/212 (8%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W + I Y+I N +S + +V+ +
Sbjct: 1370 PGPPVGILFPEVRTTSVRLIWQSPSQPNGIILAYQITYYLN-SSNSNTATVNVLNPSARQ 1428
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + +P Q SR +
Sbjct: 1429 YT-------VTSLKPESVYVFRITAQTRKGWGEAAEALVVTTEKRARP-QPTSRPLVPQK 1480
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWEP +P YY + R+ D + + +V F
Sbjct: 1481 HVQARQVLLSWEP--GSDGLSPVRYYTVQLRELPDKNWTVHSASVNHEAASYIVSRLKPF 1538
Query: 457 YYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
T Y+ +++A ND+G ESE +T D
Sbjct: 1539 --TSYQFRIKATNDIGDSEYSEESEAITTLQD 1568
>gi|432866114|ref|XP_004070705.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Oryzias latipes]
Length = 1245
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 216/483 (44%), Gaps = 33/483 (6%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+D+ C G P +W RNGEL ++ + ++ + D V + + +D +Y
Sbjct: 341 SDVHIKCSVGGKPPPDITWRRNGELFRDDS----ENNKRVLDDTV--VLHKAKSQDSGVY 394
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N ++ + V++ P + ++ E G N+ I C+ ++P W
Sbjct: 395 QCEASNPHGRILANINILVMSKPPQILTKDVQ-EYAVILGDNIVINCSVFSSPPASISWI 453
Query: 125 KDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K+ +I +G R F+N +L I DSG Y C N G S L+ + P+
Sbjct: 454 KEEAVI-TGERFSTFDNNQSLKIINAEESDSGKYECVVKNTEGTS-SITALLDVKDPTKI 511
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--WTHNGVRIGNMDLNELETPNINIDGG 241
P I + +L C ++ L+ +++ W +G I L E + I G
Sbjct: 512 VSPPENKQIIIGTSAKLVCKVTYDKSLEGSFVMEWRKDGEEI----LLSEENSSRYIRGD 567
Query: 242 L-LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT-SATIQW 299
L+I N + D G Y C+ ++++ ++ +IV P P ++++E+ + + I W
Sbjct: 568 HNLQIMNVNLRDQGMYTCIARTSLDEVRATALIIVLDVPDAPERLKIIEIKDSRNIVISW 627
Query: 300 TDGATNGRPITHYKIIARTN-WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
G+ + +T + + N W + KE+ R G +A+ E L Y+
Sbjct: 628 KPGSDHNSSVTEFVVEYEENQWEPGGW--------KELKRVPG-NQATAELALYGNLRYQ 678
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N +G G PS PS ++NT P + P I G + ISW+PL + N P
Sbjct: 679 FRVYAVNAIGPGPPSEPSERHNTDPTVPDRNPENIKIQGHIPYQMEISWDPLLPTESNGP 738
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ YK+ +R+ + +E L + + V P+ + YE+KVQA N G PE +
Sbjct: 739 GLEYKVSYRRLKVEDAWTEYLVQRPSY--VVNGTPA---FAPYEIKVQARNSFGWAPEPK 793
Query: 479 VVT 481
VVT
Sbjct: 794 VVT 796
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 114/294 (38%), Gaps = 30/294 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+DN +T TC+A G P TY W ++G+ + + D L + +
Sbjct: 47 LDNS--VTITCQARGNPPPTYKWTKDGKDVTLSNIASIASDP---TSGTLRFHSMPLRQV 101
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A NQL T + +++ P F + + EG +V + CNP A P+
Sbjct: 102 EGKYKCFASNQLGTAMTVDIEIIVSALPKFPRETI-PPVIVNEGESVILECNPPEAVAPR 160
Query: 121 -FVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTAT--NVHGM-DESKGRL 174
W G I R + +GNL S + RD Y C+A + M +S L
Sbjct: 161 QLYWMTIGLEHIKQDKRVSMGTDGNLYFSNALQRDSRQDYCCSAAFPRIRTMVQKSPMAL 220
Query: 175 IVLHGPSYYEQLPPKI---------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+V+ + + P + + LQL C DV ++ ++G
Sbjct: 221 VVVKSSEFITRAPSMLLPSGVQTEKVLMKGEELQLECITAGLPTPDVTWM------KMGE 274
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ + N N L ++ D G Y C ++ G+ VIVE PP
Sbjct: 275 KLPDQAKLSNFN---KTLTVSAVEETDQGRYMCKASNSAGETVHYFHVIVEEPP 325
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 8/185 (4%)
Query: 95 LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDS 154
+++E +G + + C P P W K G + + F N L +S V D
Sbjct: 241 VQTEKVLMKGEELQLECITAGLPTPDVTWMKMGEKLPDQAKLSNF-NKTLTVSAVEETDQ 299
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y C A+N G +IV P + P ++ ++CS + D+
Sbjct: 300 GRYMCKASNSAGETVHYFHVIVEEPPVWLGDPPQGQITPVGSDVHIKCSVGGKPPPDIT- 358
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
W NG + N N + + + A D+G Y+C + G+I ++
Sbjct: 359 -WRRNGELFRDDSEN-----NKRVLDDTVVLHKAKSQDSGVYQCEASNPHGRILANINIL 412
Query: 275 VEGPP 279
V P
Sbjct: 413 VMSKP 417
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGG 395
Y ++ + + N ++ YE KV A N G+ +P P+ T D+P AP +
Sbjct: 758 YLVQRPSYVVNGTPAFAPYEIKVQARNSFGW----APEPKVVTGYSGEDRPATAPQDVAV 813
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFW---RKKNDTEF---QSETLKEYGNVGIAV 449
L +SW +P Y++ W R D E + +++ GN A+
Sbjct: 814 EVINTTALRVSWTQVPPATVRGHLGGYEVHWVRTRSFLDPEKILNEKQSMSFPGNGSYAI 873
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
V P Y+EY++ V+ N G GP S+ VT
Sbjct: 874 V--PGLKPYSEYKLTVRVFNSKGNGPTSDPVTF 904
>gi|282554945|gb|ADA82573.1| hypothetical protein [Ailuropoda melanoleuca]
Length = 348
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 143/300 (47%), Gaps = 12/300 (4%)
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 243
P K+ + ++ L C + ++V +IW+ NG I DL + I G G L
Sbjct: 10 PSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI---DLKKGVAHFERIGGESVGDL 66
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G+
Sbjct: 67 MIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGS 126
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI + I ART ++ W VS + +G+ + L PW YEF+V+A
Sbjct: 127 DNNSPIQIFTIQARTPFSVGWQAVS-----TVPEILSGKTYNATVVGLSPWVEYEFRVVA 181
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
GN +G GEPS S T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 182 GNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYI 241
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
I R T + E + + V R S + +EVKV N+ G G S + ++
Sbjct: 242 IMLRPVGSTAWTKERVPSVESSRF-VYRNESITPLSPFEVKVGVYNNEGEGSLSTMSIVY 300
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 121/325 (37%), Gaps = 36/325 (11%)
Query: 121 FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
F+W +G++I FE G+L+I + + SG Y CT + +
Sbjct: 37 FIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADI 96
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
IV P E + + + L R + + + I +G ++ + P
Sbjct: 97 IVRGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGWQAVSTV--P 154
Query: 235 NINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPG 283
I + G T + EYE V +++G + TK +V V P + G
Sbjct: 155 EI-LSGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNING 213
Query: 284 GVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 340
G ++ I W + NG Y I+ R ++ W E V E R+
Sbjct: 214 GGG----SRSELVITWESIPEELQNGEEF-GYIIMLRPVGSTAW--TKERVPSVESSRFV 266
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
R E+ + P S +E KV N G G S+ S Y+ D+P QAP
Sbjct: 267 YRNES-----ITPLSPFEVKVGVYNNEGEGSLSTMSIVYSG-EDEPQQAPRGTSVQSFSA 320
Query: 401 GDLSISWEPLPREKQNAPNIYYKIF 425
++ +SW+ + + + Y++
Sbjct: 321 SEMEVSWKAIAWNRNTGRVLGYEVI 345
>gi|46369977|gb|AAS89824.1| neuronal cell adhesion molecule long isoform Nc7 [Rattus
norvegicus]
Length = 1194
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 374 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 427
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 428 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 483
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 484 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 540
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 541 TRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 593
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 594 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 653
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 654 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 703
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 704 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 763
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 764 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 818
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 819 LNDVGFAPEPAAV 831
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 283 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 334
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 335 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 391
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 392 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 447
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 448 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 497
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 498 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 540
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 53 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 169 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 228
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 229 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 288
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 289 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 340
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 341 LGAVHHTISVTVKAAP 356
>gi|440913028|gb|ELR62536.1| Protein sidekick-1, partial [Bos grunniens mutus]
Length = 2033
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 203/489 (41%), Gaps = 45/489 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA GVP WF++ +N L++ + L +R L PE D ++QC A N
Sbjct: 309 CEAMGVPPPALQWFKDAISINK----LQNPRYQVLAGGGLRVRQLRPE-DSGIFQCLASN 363
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ L V + P+F + P+++ G + C AP+P VW + +I+
Sbjct: 364 AGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGT--TAVLRCEVSGAPRPAIVWSRGSHIL 421
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PVS D+G Y+C A N G ++ L V + S
Sbjct: 422 ASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANSEGSLDASAMLTVWNRTSIVTP- 480
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + + L C A + + + Y+W + V I + + + DG LL I+
Sbjct: 481 PEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIAPSSSSRVV---VEKDGSLL-IS 536
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C V S G S + V P P + + H + + W
Sbjct: 537 QTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQNLVASLNPAHSHAVVLSWVRPFD 596
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y I+ + NS W V +G E+ T R L P TY+F+V A
Sbjct: 597 GNSPVLYY-IVELSENNSPW-KVHLSDVGPEMTGVTVRG-------LTPARTYQFRVCAV 647
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN-------- 416
N++G G+ S+ + + P + P P I G + + W+P P + N
Sbjct: 648 NQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHNGVLRGYIL 707
Query: 417 ----APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
AP Y++ E+Q + + ++ + +T+YE++V A N G
Sbjct: 708 RQVAAPGHAYRL---AGLPGEYQQRNIS---SPEVSYCLVTELIIWTQYEIQVAAYNGAG 761
Query: 473 PGPESEVVT 481
G S VT
Sbjct: 762 LGVFSRAVT 770
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 106/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P +++ +W RNG + T L R N + D
Sbjct: 210 SETTLECIANARPAEELSVTWKRNGVRV---TTGLHGFGRRLTISNPTS-------SDTG 259
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A + + + A L ++ P F P +S A NV I C P P
Sbjct: 260 VYVCEAALPGSAFEPARARAFLSIIE-PPYFTAEP-KSRILAEVEENVDIVCEAMGVPPP 317
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R ++ G L + + +DSGI+ C A+N G ++ L V
Sbjct: 318 ALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPEDSGIFQCLASNAGGEVQTHTYLDVT 377
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-----AYIWTHNGVRIGNMDLNELE 232
+ + QLP T+ LRC + ++I VRI L
Sbjct: 378 NVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFML---- 433
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I S DAG Y C ++ G + + V
Sbjct: 434 -----LESGGLQIAPVSIQDAGSYTCHAANSEGSLDASAMLTV 471
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+ WT+G P T Y I AR + W + K
Sbjct: 1805 AEGSPGSPRDVSVTK-STSELTLHWTEGQAGRTPTTGYVIEARPSDEGLW-----DMFAK 1858
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1859 DIPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAKVETPF 1910
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 966 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTAISRWIVQGQVG------ 1019
Query: 326 NVSEHVIGKEVDRYTGRKEASIENV-------LVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
IG E + T +E + + L P++ Y F++ N +G G S S
Sbjct: 1020 -----AIGDEEEWVTLCEEENEPDAQMLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRV 1074
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 435
T P AP+ I L + W PLP + N ++ Y+I +WR +
Sbjct: 1075 IQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRLDLPSAVL 1134
Query: 436 SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
++ + + R+ EF +TEYE+++QA N +G GP S V
Sbjct: 1135 TQVISD---------RLEREFTVEGLEEWTEYELQMQAFNAIGAGPWSAAV 1176
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 61/277 (22%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 23 LVLTCLAEGSWPLEFKWTHN----DSELTTYTSEYKYVIP----SLQRL----DAGFYRC 70
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKF 121
+N+ L R S Q+ + +R + SE G + P + P+P+
Sbjct: 71 VVRNRMGALLQRRSEVQVAYMGDFTDADERRVVSE------GRAAVLSLPPISSCPRPQV 124
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN-----------VH----- 165
W +DG+ I R I L+I + D+G Y A N VH
Sbjct: 125 TWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPPVHLSIAR 184
Query: 166 --GMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
GM E+ +IV +PP + +A L C A+ +++ W NGV
Sbjct: 185 DTGMPEAVAPIIV---------VPPSNRSVVAGSSETTLECIANARPAEELSVTWKRNGV 235
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
R+ T ++ G L I+N + +D G Y C
Sbjct: 236 RV---------TTGLHGFGRRLTISNPTSSDTGVYVC 263
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 38/231 (16%)
Query: 279 PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 332
P P +QV +V S ++W G+ PI ++ + + R W + ++S
Sbjct: 1386 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1445
Query: 333 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 392
V+R L P+++Y+ ++ A N++G + S+ + T D P + P
Sbjct: 1446 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1493
Query: 393 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 440
+ + I W+P E N Y+I++R+ + +S+TLK
Sbjct: 1494 VSVTPRTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1553
Query: 441 ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
+ V + E Y YEV + A N +G GP S V ++
Sbjct: 1554 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVF 1604
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 264 VGKISTKTTVI--VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-I 315
G S + VI ++ PP + P + V +TS ++W D NG P + Y+I
Sbjct: 1065 AGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKY 1124
Query: 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 375
R + S V VI ++R E ++E L W+ YE ++ A N +G G P S
Sbjct: 1125 WRLDLPSA---VLTQVISDRLER-----EFTVEG-LEEWTEYELQMQAFNAIGAG-PWSA 1174
Query: 376 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEF 434
+ + T P AP + + ++W +P QN + YKI +R K+ D E
Sbjct: 1175 AVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEP 1234
Query: 435 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
+S ++ GN + + + + YE++V A +G G
Sbjct: 1235 RSHVVR--GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNG 1271
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1287 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1344
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR---IG 394
++T + L P S Y F++ A G+GEP + ++P AP R +
Sbjct: 1345 QFTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP--APPRELQVP 1395
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
L + W +P +P Y+ + R+ ++Q+ + VV
Sbjct: 1396 QADVTARSLCLRW--VPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEATACVVERLR 1453
Query: 455 EFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
F T Y+++++A ND+G E+E VT D
Sbjct: 1454 PF--TSYKLRLKATNDIGDSDFSAETEAVTTLQD 1485
>gi|326663834|ref|XP_683194.5| PREDICTED: protein sidekick-1 [Danio rerio]
Length = 2183
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 202/486 (41%), Gaps = 47/486 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLE--DQDRYFIQDN--VLTIRYLNPERDPAMYQC 66
C A GVP WF++ +PL + RY + + VL +R + P+ D ++QC
Sbjct: 374 CHAKGVPTPKLEWFKDA-------IPLSTLNNSRYKLTTSSMVLQVRRIQPD-DAGIFQC 425
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N + L + ++ P F P S+ +G + C+ APKP VW+K
Sbjct: 426 FAENTAGEIQAHTNLVITSMSPLFTTPP--SDITVTDGTSAVFTCDTSGAPKPAIVWRKG 483
Query: 127 GNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
++ SG R + E+G L I P+ D+G Y+C A+N G+ + L VL ++
Sbjct: 484 SQVLASGSVQTPRFTLLESGGLQILPIMPSDAGNYTCLASNTEGLVNATVALTVLSR-TF 542
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
P + L C+A + + V Y W + G L+ +++ G
Sbjct: 543 ISTPPEDQRVIKGTTAVLHCAATHDPRVTVRYSW-----KKGTKPLSVSTGGRVSMKEGS 597
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWT 300
L+I+ D G+Y C V S G S + V P P +QV E + + W
Sbjct: 598 LQISQTWSGDIGDYTCRVISPAGNDSKSARLEVIELPHSPRNLQVALNETDSRTVLLSWV 657
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV----PWST 356
P+ HY II + NS W Y ++ ++LV P T
Sbjct: 658 RPFDGNSPLLHY-IIEFSENNSPW------------KVYMDDVSPTLASLLVIGLTPART 704
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y+F+V A N++G G+ S+ + + + P P I G + + W+P P + N
Sbjct: 705 YQFRVCAVNQVGRGQYSAETNRLMLREEPPSAPPKNIVASGRTNQSIMVQWQPPPEPQLN 764
Query: 417 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
Y + +R EFQ LK + I I +T+YE++V A G G
Sbjct: 765 GVLRGYVLRYRLAGLPGEFQ---LKNITSAEINYCLIGELIIWTQYEIQVAAYTGAGLGV 821
Query: 476 ESEVVT 481
S+ T
Sbjct: 822 YSQSAT 827
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++A L A + + W RNG L T ++ R + N + D
Sbjct: 275 SEATLECVANARSLDRLQVFWKRNGVRL---TAGVDSFGRRLVISNPTSA-------DGG 324
Query: 63 MYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A + K+ + A L VL P F +P + A NV + C+ + P P
Sbjct: 325 LYVCEATLRNSSQKSTEAKAYLSVLE-SPHFTSKP-KRYMIAEVEKNVELQCHAKGVPTP 382
Query: 120 KFVWKKDGNIIGS--GGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
K W KD + + R K+ + +L + + DD+GI+ C A N G ++ L++
Sbjct: 383 KLEWFKDAIPLSTLNNSRYKLTTSSMVLQVRRIQPDDAGIFQCFAENTAGEIQAHTNLVI 442
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ P IT+ + C T A +W G ++ + ++TP
Sbjct: 443 TSMSPLFTTPPSDITVTDGTSAVFTCD--TSGAPKPAIVW-RKGSQV--LASGSVQTPRF 497
Query: 237 N-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I +DAG Y C+ +T G ++ + V
Sbjct: 498 TLLESGGLQILPIMPSDAGNYTCLASNTEGLVNATVALTV 537
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 112/283 (39%), Gaps = 47/283 (16%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W RN + T + RY TI L E D +YQC
Sbjct: 88 LVLTCLAEGSWPLEFKWMRNSTDITEYT----PEYRY-------TIVSLKRE-DAGVYQC 135
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA---PKPKFV 122
+N++ + A +RV + +F + LE +G + NP A P+P+
Sbjct: 136 AVRNRMGALIQTRADVRVAYMD-NFAE--LEQRKTVSQGRAAVL--NPPAVTSFPRPQVT 190
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH---- 178
W +DG I R I + L++ + D+G Y A N + I L
Sbjct: 191 WFRDGVKIIPNHRVAITLDNQLVVLSTAAADAGRYYVQAVNERNGENKTSPSIYLSIANV 250
Query: 179 -GPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
P+ E + P I I A L C A+ L + W NGVR+
Sbjct: 251 IAPA--ELVAPVIVIAPKNTSVVAGASEATLECVANARSLDRLQVFWKRNGVRL------ 302
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272
T ++ G L I+N + AD G Y C ++T+ S K+T
Sbjct: 303 ---TAGVDSFGRRLVISNPTSADGGLYVC--EATLRNSSQKST 340
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 102/245 (41%), Gaps = 13/245 (5%)
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATI 297
GL +T + A V ++ VG ST +T+ PP LPG + + + S TI
Sbjct: 1001 GLTSLTTYALQVA----AVTQAGVGA-STSSTISTGLPPELPGAPSNLVISNISPRSVTI 1055
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
Q++ G+ I+ + + + +E + E D I N L+P++ Y
Sbjct: 1056 QFSPGSDGKTEISKWIVEGQVVIVGEEEKEAEWKVLYERDSPPASDTLEIPN-LIPFTQY 1114
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
F++ N +G S S T P AP+ + L I WEPLP N
Sbjct: 1115 RFRMKQVNIVGSSPFSESSRLMQTLQSSPDVAPTELVVFSASETSLRIRWEPLPEAAYNG 1174
Query: 418 --PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
++ Y++ R + F ++ + V + +T+YE+ +QA N +GPGP
Sbjct: 1175 NPESVGYRV--RAQRADGFGQPRMETVSDRLSCEVTVEGLEEWTDYELSIQAFNSIGPGP 1232
Query: 476 ESEVV 480
S V
Sbjct: 1233 WSSHV 1237
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
VEG PG P V + ++ T+ WT G+ P+T Y I AR + W +H+
Sbjct: 1866 VEGSPGSPLQTSVTK-SASALTLHWTKGSEGAGPVTGYVIEARPSDEGLWDTFVKHLPAG 1924
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ YT + V YEF+VI+ N GYG+PS PS + ++ P+
Sbjct: 1925 SLS-YTISLDRLRSGV-----AYEFRVISVNRFGYGDPSPPSTAMSALSETPF 1971
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
E ++E L W+ YE + A N +G G P S T P AP + +
Sbjct: 1206 EVTVEG-LEEWTDYELSIQAFNSIGPG-PWSSHVLGKTKESVPSGAPENVSAEAMSSTSV 1263
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
++W +P ++N + YK+ +R+K+ L + ++R S+F T YE+
Sbjct: 1264 LVTWGSVPEHQKNGHILGYKVLYREKDSDRAPQAHLVNGNQTHMLLLRNLSKF--TVYEI 1321
Query: 464 KVQAINDVGPGPES 477
+V A VG GP S
Sbjct: 1322 QVLAFTRVGDGPPS 1335
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 83/208 (39%), Gaps = 33/208 (15%)
Query: 297 IQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+ W G P+ ++ + + +W + ++ + EVDR L
Sbjct: 1467 LHWMAGGDGSSPVRYFTLQTLELPDGDWKTHTSSIPHNNSSWEVDR------------LK 1514
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+++Y+F+++A N++G S + T D P +AP + + + W+P
Sbjct: 1515 PYTSYKFRMMATNDVGDSAFSKETEPVTTLQDVPGEAPVILLVKPSTTTSVIVQWQPPAE 1574
Query: 413 EKQNAPNIYYKIFWRK------------KNDT----EFQSE-TLKEYGNVGIAVVRIPSE 455
N + Y++++R+ N + EF+++ T K + + +
Sbjct: 1575 GTVNGILVGYRVYYRELPSESNPKVVQSTNQSTISLEFRAKSTFKTVSSPSLTEFELTQL 1634
Query: 456 FYYTEYEVKVQAINDVGPGPESEVVTIW 483
Y Y + + A N VG P S V ++
Sbjct: 1635 SKYRRYAIVMTAFNVVGESPSSAPVEVF 1662
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 5/128 (3%)
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L + Y + A N +G S+P + A P AP I L + W+P
Sbjct: 1634 LSKYRRYAIVMTAFNVVGESPSSAPVEVFVGEA-APSVAPQNIQVKSVSSNQLDVEWQPP 1692
Query: 411 PREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
P E QN YKI +W K E + E + + + + S YT Y V++ A N
Sbjct: 1693 PVETQNGNIQGYKIHYWEKDRQNETEKELVLFVPETCVHLKNLTS---YTSYLVQLSAFN 1749
Query: 470 DVGPGPES 477
G GP S
Sbjct: 1750 AAGDGPLS 1757
>gi|354488859|ref|XP_003506583.1| PREDICTED: neural cell adhesion molecule L1-like [Cricetulus
griseus]
Length = 1259
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 204/482 (42%), Gaps = 44/482 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + + +Y I+ L + + P D + QC A+N
Sbjct: 353 CQVQGRPQPEVTWSINGMSMEK----VNKDQKYRIEQGSLILSNVQPS-DTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 408 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG L I + +D+G Y C A N L V E
Sbjct: 466 TVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITEGPRS 525
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITN 247
I R + C A + L + W +G DL E ++ I+ G L I +
Sbjct: 526 AIEKKGAR-VTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGQLVIQS 579
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE---VHKTSATIQWTDGAT 304
++D G Y CV + + ++ ++ ++V G PG +++ + + ++ + W+
Sbjct: 580 LDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVSHLELSDRYLLKQSQVHLSWSPAED 639
Query: 305 NGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
+ PI Y I +A W S +GK + S L P+ Y
Sbjct: 640 HNSPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPYVHYT 685
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP
Sbjct: 686 FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLWWMDWNAP 745
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ Y++ WR + + ET KE V + + + + YE+KVQA+N+ G GPE +
Sbjct: 746 QVQYRVQWRPQG----KQETWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQ 800
Query: 479 VV 480
V
Sbjct: 801 VT 802
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 110/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 52 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N+L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 112 RCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 171 MNSKILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S ++ + L L C A E W H
Sbjct: 231 TNSMIDRKPRLLFPTNSS------SRLVALQGQPLILECIA--EGFPTPTIKWLHPS--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 280 DPMPAHRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 332
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 11/181 (6%)
Query: 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDS 154
S A +G + + C E P P W + + + R I++N N L + V +D
Sbjct: 249 SRLVALQGQPLILECIAEGFPTPTIKWLHPSDPMPA--HRVIYQNHNKTLQLLNVGEEDD 306
Query: 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214
G Y+C A N G + V P Y+ Q P +L C +V
Sbjct: 307 GEYTCLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEVT- 364
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
W+ NG+ + ++ ++ I+ G L ++N +D +C ++ G + +
Sbjct: 365 -WSINGMSMEKVNKDQ----KYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIY 419
Query: 275 V 275
V
Sbjct: 420 V 420
>gi|46369975|gb|AAS89823.1| neuronal cell adhesion molecule long isoform Nc6 [Rattus
norvegicus]
Length = 1206
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 374 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 427
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 428 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 483
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 484 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 540
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 541 TRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 593
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 594 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 653
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 654 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 703
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 704 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 763
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 764 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 818
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 819 LNDVGFAPEPAAV 831
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 283 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 334
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 335 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 391
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 392 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 447
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 448 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 497
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 498 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 540
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 53 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 169 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 228
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 229 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 288
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 289 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 340
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 341 LGAVHHTISVTVKAAP 356
>gi|149051179|gb|EDM03352.1| rCG62174, isoform CRA_a [Rattus norvegicus]
Length = 1205
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 426
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 427 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 482
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 483 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 539
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 540 TRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 592
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 593 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 652
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 653 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 702
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 703 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 762
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 763 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 817
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 818 LNDVGFAPEPAAV 830
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 282 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 334 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 390
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 391 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 446
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 447 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 496
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 497 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 168 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 228 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 287
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 288 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 339
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 340 LGAVHHTISVTVKAAP 355
>gi|46369973|gb|AAS89822.1| neuronal cell adhesion molecule long isoform Nc3 [Rattus
norvegicus]
Length = 1198
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 374 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 427
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 428 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 483
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 484 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 540
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 541 TRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 593
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 594 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 653
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 654 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 703
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 704 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 763
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 764 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 818
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 819 LNDVGFAPEPAAV 831
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 283 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 334
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 335 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 391
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 392 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 447
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 448 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 497
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 498 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 540
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 53 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 169 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 228
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 229 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 288
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 289 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 340
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 341 LGAVHHTISVTVKAAP 356
>gi|46369971|gb|AAS89821.1| neuronal cell adhesion molecule long isoform Nc14 [Rattus
norvegicus]
Length = 1197
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 374 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 427
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 428 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 483
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 484 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 540
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 541 TRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 593
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 594 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 653
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 654 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 703
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 704 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 763
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 764 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 818
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 819 LNDVGFAPEPAAV 831
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 283 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 334
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 335 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 391
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 392 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 447
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 448 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 497
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 498 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 540
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 53 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 169 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 228
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 229 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 288
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 289 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 340
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 341 LGAVHHTISVTVKAAP 356
>gi|46369969|gb|AAS89820.1| neuronal cell adhesion molecule long isoform Nc1 [Rattus
norvegicus]
Length = 1209
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 374 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 427
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 428 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 483
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 484 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 540
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 541 TRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 593
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 594 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 653
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 654 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 703
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 704 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 763
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 764 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 818
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 819 LNDVGFAPEPAAV 831
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 283 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 334
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 335 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 391
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 392 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 447
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 448 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 497
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 498 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 540
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 53 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 169 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 228
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 229 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 288
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 289 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 340
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 341 LGAVHHTISVTVKAAP 356
>gi|348531930|ref|XP_003453460.1| PREDICTED: protein sidekick-2-like [Oreochromis niloticus]
Length = 2174
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 199/480 (41%), Gaps = 31/480 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP W+++ ++ P+ + L + L P+ D M+QC A+N
Sbjct: 310 CQARGVPQPDIVWYKDALPID----PVRTPRYRVLVGGSLQVNGLLPD-DTGMFQCFARN 364
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
++ L V ++ P+ P S++ +G +V + C AP+P W+K ++
Sbjct: 365 SAGEVQTNTYLAVTSIAPNITAGP--SDSTVIDGMSVILHCETSGAPRPAITWQKGERVL 422
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C A+N G+DE+ L+V +
Sbjct: 423 ASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASADLVVW-ARTRITTP 481
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEI 245
P ++ + C + + V ++W G I N P + +D G L I
Sbjct: 482 PQDQSVIKGTKAIMNCGVTHDPSVTVRHVWEKEGSVI-----NVQSIPRMRLDADGTLHI 536
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P V + K + + W
Sbjct: 537 SQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPTAVLSKSEKRAIDLAWAKPF 596
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W + ++ + A N L+P +Y+F++ A
Sbjct: 597 DGNSPLIRYILEVSEN-NAPWAILLANIEPEST--------AVTVNGLIPARSYQFRLCA 647
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 648 VNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYI 707
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ +R +K + + + + +T YE++V A N G G S VT W
Sbjct: 708 VRYRLTGLP--VDNQIKNISSPDVTTLLLEDLIIWTNYEIEVAAYNGAGLGTFSHKVTEW 765
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 177/492 (35%), Gaps = 56/492 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L R+ + ++ + + D Y C A N
Sbjct: 403 CETSGAPRPAITWQKGERVLASGSVQLP---RFTLLESGSLLISPSHISDAGTYTCMASN 459
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V+ + P + G + + + + VW+K+G++I
Sbjct: 460 SRGIDEASADL-VVWARTRITTPPQDQSVIKGTKAIMNCGVTHDPSVTVRHVWEKEGSVI 518
Query: 131 G--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
S R ++ +G L IS D G Y+C T+V G D L V QLP
Sbjct: 519 NVQSIPRMRLDADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRV-------RQLP- 570
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNG----VRIGNMDLNELETP----NINIDG 240
A N S + +D+A+ +G +R ++++E P NI+
Sbjct: 571 ----HAPENPTAVLSKSEKRAIDLAWAKPFDGNSPLIRY-ILEVSENNAPWAILLANIEP 625
Query: 241 GLLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 293
+T A Y+ C V K K + + ++ E P P V
Sbjct: 626 ESTAVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQ 685
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--- 350
S IQW P +H I R + V + G VD K S +V
Sbjct: 686 SIMIQW-----QPPPESHQNGILRG------YIVRYRLTGLPVDNQI--KNISSPDVTTL 732
Query: 351 ----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
L+ W+ YE +V A N G G S ++ T P AP + + +
Sbjct: 733 LLEDLIIWTNYEIEVAAYNGAGLGTFSHKVTEW-TLQGVPTIAPGNVQAEAVNSTTIRFT 791
Query: 407 WEPLPREKQNAPNIYYKIF-WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W + N N YK+ W D E T++ + V + +TEY V
Sbjct: 792 WTAPNPQFINGINQGYKLLAWEPGKDDEVAMVTVRPNFQDSVHVGYVTGLKKFTEYYTSV 851
Query: 466 QAINDVGPGPES 477
G GP S
Sbjct: 852 LCFTTPGDGPRS 863
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 136/385 (35%), Gaps = 64/385 (16%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD---PAM 63
L TC A G + + W N L +L RYL P D
Sbjct: 24 LVLTCMAEGSWPLEFKWIHNSTELTRFSL---------------EYRYLIPSLDRSHAGF 68
Query: 64 YQCRAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C +N+ L R + Q+ + SF++ GEG V + P+P+
Sbjct: 69 YRCIVRNRVGALLQRRTEVQVAFMG---SFEEGERTQSVSQGEGA-VIPAPRIRSFPQPQ 124
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-- 178
W +DG I R I + L+I D+G Y A N + + I L
Sbjct: 125 VTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQPITLSVE 184
Query: 179 ---GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMD 227
GP+ I + + + C A+ L+ ++ W NGV + G D
Sbjct: 185 NVGGPADPIAPTIIIPPRNTSVVTGTSEVTMECVANARPLIKLSISWRKNGVLVNSGLSD 244
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGG 284
N L I + +DAG YEC + S+V +S + V PP
Sbjct: 245 FNR-----------RLTILSPVVSDAGYYECEAILRSSSVPSVSAGAYLHVLEPPQF--- 290
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
++ E H T+ + D R + I+ W+ + + RY
Sbjct: 291 IKEPEKHITAEMEKVVDIPCQARGVPQPDIV--------WYKDALPIDPVRTPRYRVLVG 342
Query: 345 ASIE-NVLVPWSTYEFKVIAGNELG 368
S++ N L+P T F+ A N G
Sbjct: 343 GSLQVNGLLPDDTGMFQCFARNSAG 367
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 49/287 (17%)
Query: 220 GVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTK 270
G RI + N T PN+ ++ GL +T + AG ++ G+
Sbjct: 907 GYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAG------MTSKGQGMLS 960
Query: 271 TTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NST 323
++ I G PP LPG + + + S +Q+ G I+ + + A+ N
Sbjct: 961 SSTISSGVPPELPGPPTNMAISNIGPRSINLQFKPGYDGKTSISRWLVEAQVGAVGENED 1020
Query: 324 WFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
W V H + E EA V L P++ Y F++ N +G PS PS + T
Sbjct: 1021 WLMV--HQVFNE-------PEARSLEVPGLNPYTFYRFRMRQVNIVGTSPPSQPSRKIQT 1071
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ--NAPNIYYKIFWRKKNDTEFQSETL 439
P AP+ + L + W PLP + NA + Y++ + + Q L
Sbjct: 1072 LPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYNGNAEQVGYRVQYSRAGS---QGHPL 1128
Query: 440 KEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ EF +TEYEV+VQA+N +G GP S+ V
Sbjct: 1129 TH-----VITDRLEREFTIEDLEEWTEYEVRVQAVNGIGVGPWSQPV 1170
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 25/206 (12%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
V + W G+ P+ +Y + R S W V + E Y I
Sbjct: 1392 HVQARQVLLSWEPGSDGLSPVRYYTVQLRELPESNW-TVHSASVSHEATTY-------IV 1443
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L P+++Y+F++ A N++G E S S T D P +APS + + I W+
Sbjct: 1444 SRLKPFTSYQFRIKATNDIGDSEYSQESEAITTLQDVPDEAPSILSVTPHTTTSVLIRWQ 1503
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQS-----------------ETLKEYGNVGIAVVR 451
P EK N + ++I +R+ +S +L+ + +
Sbjct: 1504 PPSEEKINGILLGFRIRYRELLYDRLRSYIHTVNSASAWAELSAPYSLRNLSDSTLTQYE 1563
Query: 452 IPSEFYYTEYEVKVQAINDVGPGPES 477
+ + YE+++ N VG GP S
Sbjct: 1564 LDKLSKHKRYEIRMSVYNAVGEGPTS 1589
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P+SP + P P + L ++W+P P + QN
Sbjct: 1573 YEIRMSVYNAVGEG-PTSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQN 1631
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++KN+TE G V++ + YT Y + V N G
Sbjct: 1632 GDIQGYKIYFWEFQRKNETERMRTLFMPEGG-----VKLKNLTGYTTYMISVAPFNAAGD 1686
Query: 474 GPES 477
GP S
Sbjct: 1687 GPRS 1690
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+Q++ + G P+TH VI ++R E +IE+ L W+
Sbjct: 1116 VQYSRAGSQGHPLTH-------------------VITDRLER-----EFTIED-LEEWTE 1150
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE +V A N +G G S P + T P P+ + + + W +P +N
Sbjct: 1151 YEVRVQAVNGIGVGPWSQPV-RGRTRESVPSSGPTNVSAFATTSSSILVRWFEVPEPDRN 1209
Query: 417 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
+ YK+ +++K+ D+ T++ GN V++ Y YE++V A +G G
Sbjct: 1210 GLILGYKVVYKEKDSDSPVHFWTVE--GN-ATHSVQLTGLGKYVLYEIQVLAFTRIGDG 1265
>gi|45383896|ref|NP_989436.1| protein sidekick-1 precursor [Gallus gallus]
gi|82242600|sp|Q8AV58.1|SDK1_CHICK RecName: Full=Protein sidekick-1; Flags: Precursor
gi|23194254|gb|AAN15075.1| sidekick-1 [Gallus gallus]
Length = 2169
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 200/485 (41%), Gaps = 31/485 (6%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D+ C+A GVP + W+++ L+ L++ + L I L P+ D +
Sbjct: 353 EKDVDILCQAMGVPIPSLVWYKDSVPLSK----LQNPRYKVLLSGGLRIHALRPQ-DAGI 407
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+QC A N+ + L V +KP+F + P +T EG + C APKP W
Sbjct: 408 FQCFASNKAGEIQTYTYLDVTNIKPAFIQPP--EDTTVTEGMTAMLTCEVSGAPKPAISW 465
Query: 124 KKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
KK I+ SG R + E+G L I+PV D+G Y+C A N G + L V +
Sbjct: 466 KKGNQILASGSVQIPRFVLLESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTVWNR 525
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
++ P T+ LRC A + + + Y+W + V I + + + D
Sbjct: 526 -TFIVHPPENSTVIKGTTATLRCEATHDPRISIRYVWKKDSVVINPSSSSRI---TVEKD 581
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATI 297
G LL I+ D G+Y C V S G S + V P P + + S +
Sbjct: 582 GTLL-ISQTWSGDIGDYTCEVISFGGNDSRMARLEVIELPHSPQNLLATLNSSYSRSVVL 640
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W P+ +Y + N NS W + + + + L P TY
Sbjct: 641 SWVRPFDGNSPVLYYMVELSEN-NSPW--------KVHLSNLDPKMTSVTVSGLTPARTY 691
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+V A N++G G+ SS + + P + P P I G + + W+P P + N
Sbjct: 692 QFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPESEHNG 751
Query: 418 PNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R E+Q K + I + +T+YE++V + N G G
Sbjct: 752 VLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLVTDLIIWTQYEIQVASYNGAGLGAF 808
Query: 477 SEVVT 481
S VT
Sbjct: 809 SRPVT 813
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 114/306 (37%), Gaps = 45/306 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I D YQC
Sbjct: 74 LVLTCLAEGSWPLEFKWLHN----DSEITTYSSEYKYIIP--------ALQRSDAGFYQC 121
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +F + GE V F + + P+P+ W
Sbjct: 122 IVRNRMGALLQRRSEVQVAYMG---NFMDANQKKTVTEGEAA-VLNFMHIFSYPRPQVTW 177
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+DG+ I R I L+I S D+G Y A N + LI L S
Sbjct: 178 FRDGHKIIPSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSPLIHLSIASAT 237
Query: 184 EQ---------LPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ +PP K + + L C A + ++ +W NG++I
Sbjct: 238 DPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIKI--------- 288
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL---PGGVQ 286
T I+ G L ITN + AD G Y C K ST K + + PP P GV
Sbjct: 289 TSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFTAEPEGVI 348
Query: 287 VVEVHK 292
+ EV K
Sbjct: 349 LAEVEK 354
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P + V + + T+QWT+G + +P T Y I AR + W + K+
Sbjct: 1852 EGSPGSPHEILVTK-SASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLW-----DMFVKD 1905
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A NE GYGEPS PS + + P+
Sbjct: 1906 IPRSATSYTVSLDK-LKQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPF 1956
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNS 322
T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1009 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSICKWIVEGQVGVLGEEE 1068
Query: 323 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382
W VS H EVD + + N L P++ Y F++ N +G S PS T
Sbjct: 1069 EW--VSLH----EVDNEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGASPLSQPSRVIQTL 1121
Query: 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ-SET 438
P AP + L + W PLP + N ++ Y+I FWR + Q S
Sbjct: 1122 QAPPDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWR----VDLQPSAL 1177
Query: 439 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
LK + I +TEYE+++QA N +G GP +EVV +
Sbjct: 1178 LKVISDRLERECTIQDLEEWTEYELQIQAFNAIGAGPWNEVVGV 1221
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 25/255 (9%)
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI--VEGPPGL-PGGVQVVEVHKT 293
D +LE+ N + + + VG +S + VI ++ PP + PG V V ++
Sbjct: 1081 DAQMLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVSVRTASES 1140
Query: 294 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
S ++W D NG P + Y+I R + + VI ++R E +I+
Sbjct: 1141 SLRMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSAL---LKVISDRLER-----ECTIQ 1192
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L W+ YE ++ A N +G G P + T P P + + ++W
Sbjct: 1193 D-LEEWTEYELQIQAFNAIGAG-PWNEVVGVRTRESVPSAPPENVSAEAVSSTQILLTWS 1250
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+P +QN + YKI ++ K+ D+E +S+T++ GN + + + Y YE++V A
Sbjct: 1251 AVPESEQNGLILGYKILYKAKDLDSEPRSQTVR--GNHTQSCL-LSGLRKYVLYEIRVLA 1307
Query: 468 INDVGPG-PESEVVT 481
+G G P S V+T
Sbjct: 1308 FTRIGDGVPSSPVLT 1322
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+V S + W G+ PI ++ + R N W S + + + I
Sbjct: 1441 DVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSI--------SHEATSCII 1492
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+++Y+ +V A N++G + S+ + T D P + PS + + + W+
Sbjct: 1493 ESLNPFTSYKLRVKATNDIGDSDYSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQ 1552
Query: 409 PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GNVGIA 448
P E N + Y+I++R+ KN + ++E + + +
Sbjct: 1553 PPKAESLNGLLLGYRIYYRELDYDAGSATESKAVKNPSALRAELTPQSSFKTVNSSSALT 1612
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ Y YEV + A N +G P S V ++
Sbjct: 1613 TYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVF 1647
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1330 PGPPIRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVE--VGSTVR 1387
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++T L P S Y F+ A G+GEP + ++P P ++
Sbjct: 1388 QFTATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPQQLTTPQ 1439
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ S+ +P ++P Y+ + R+ + ++Q+ + ++ + F
Sbjct: 1440 SDVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSISHEATSCIIESLNPF- 1498
Query: 458 YTEYEVKVQAINDVGP---GPESEVVTIWHD 485
T Y+++V+A ND+G E+E VT D
Sbjct: 1499 -TSYKLRVKATNDIGDSDYSAETEAVTTLQD 1528
>gi|335306710|ref|XP_003360546.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Sus scrofa]
Length = 1248
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 215/492 (43%), Gaps = 64/492 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y I L + + P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIHHGALILSNVQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A +G + C AP P W K
Sbjct: 401 ARNRHGLLLANAYIYVVEL-PAKILTP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDK 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHG 179
+G + R + NG L I + +D+G Y C A N + + K +L G
Sbjct: 459 EGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQG 518
Query: 180 P-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNIN 237
P S E+ ++ C A+ + L + W +G DL EL ++
Sbjct: 519 PRSAIEKKGSRVAFT--------CQAYFDSSLQHSITWRGDG-----QDLRELGDSDKYF 565
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTS 294
I+ G L I + ++D G Y CV + + + ++ ++V G PG ++V + H ++
Sbjct: 566 IEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQ 625
Query: 295 ATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ W+ + PI Y I +A W S +GK T A+++
Sbjct: 626 VRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGKVPGNQTS---ATLK 673
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ ++W+
Sbjct: 674 --LSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWK 731
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
PL NAP + Y++ WR + E + V ++ + + + YE+KVQA+
Sbjct: 732 PLRWMDWNAPQVQYRVQWRPQGTQGAWQEQI-----VSDPLLVVSNTSTFVPYEIKVQAV 786
Query: 469 NDVGPGPESEVV 480
N G GPE ++
Sbjct: 787 NSQGKGPEPQIT 798
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 188/497 (37%), Gaps = 72/497 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y
Sbjct: 255 LVLECIAEGFPTPTIKWLRL-----SGPMPA---DRVTYQNHNKTLQLLNVVEEDDGEYH 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
C A+N L S + +T++ P + +P +S Y G G + C + P+P+ W
Sbjct: 307 CLAENPLG---SDRHVYYVTVEAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTW 361
Query: 124 KKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ +G + + + + +G L++S V D+ + C A N HG L++ +
Sbjct: 362 RINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYI 414
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
Y +LP KI + + T LL A+ G + ++ + E + D
Sbjct: 415 YVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDER 468
Query: 242 LLEITNASFA-------DAGEYECVVK------STVGKISTK-TTVIVEGPPGLPGGVQV 287
TN + D G Y C + V + K T I++GP
Sbjct: 469 FFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRS------- 521
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ K + + +T A + H W ++ E +G + D+Y + +
Sbjct: 522 -AIEKKGSRVAFTCQAYFDSSLQH-----SITWRGDGQDLRE--LG-DSDKYFIEEGRLV 572
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ L + +A +L E + +P P S + + +SW
Sbjct: 573 IHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVS--DQHLLRQSQVRLSW 630
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
P + NAP Y I + K + +L K GN A +++ Y Y +V
Sbjct: 631 SPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSP---YVHYTFRVT 685
Query: 467 AINDVGPG---PESEVV 480
AIN GPG P SE V
Sbjct: 686 AINKYGPGEPSPASETV 702
>gi|148704862|gb|EDL36809.1| mCG125252 [Mus musculus]
Length = 1254
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 203/492 (41%), Gaps = 54/492 (10%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 327 TLICRANGNPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQC 380
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 381 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 436
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 437 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 493
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + P + + C + L +W + + N + + D
Sbjct: 494 TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDK 546
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L +++ D G Y C +T+ S + V P P +++ S + WT
Sbjct: 547 DHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDVPNPPFDLELTNQLDKSVQLTWT 606
Query: 301 DGATNGRPITHYKIIARTNWNSTWFN-VSEHVIGKEVDRYTG---RKEASIENV------ 350
G N PIT + W WF V+E +I E + R +A +
Sbjct: 607 PGDDNNSPIT-------SMW---WFGFVAEFIIEYEDAMHDAGLWRHQAEVSGTQTTAQL 656
Query: 351 -LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P Q P + G G + +L I+W+P
Sbjct: 657 KLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKP 716
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 717 LNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 771
Query: 469 NDVGPGPESEVV 480
NDVG PE V
Sbjct: 772 NDVGFAPEPAAV 783
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NVLTIRYLNPERDPAMY 64
L+ C A G+P W + +L + +R F ++ L I +++ E D Y
Sbjct: 236 LSLECIAEGLPTPIIYWIKEDGMLPA--------NRTFYRNFKKTLQITHVS-EADSGNY 286
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 287 QCIAKNALGAVHHTISVTV-KAAPYWIVAPQNLVLSPGENG--TLICRANGNPKPRISWL 343
Query: 125 KDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 344 TNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVL---- 398
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 399 ---AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDI 449
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 450 YVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 493
>gi|335306708|ref|XP_003360545.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Sus scrofa]
Length = 1253
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 215/492 (43%), Gaps = 64/492 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y I L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIHHGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A +G + C AP P W K
Sbjct: 406 ARNRHGLLLANAYIYVVEL-PAKILTP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDK 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHG 179
+G + R + NG L I + +D+G Y C A N + + K +L G
Sbjct: 464 EGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQG 523
Query: 180 P-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNIN 237
P S E+ ++ C A+ + L + W +G DL EL ++
Sbjct: 524 PRSAIEKKGSRVAFT--------CQAYFDSSLQHSITWRGDG-----QDLRELGDSDKYF 570
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTS 294
I+ G L I + ++D G Y CV + + + ++ ++V G PG ++V + H ++
Sbjct: 571 IEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQ 630
Query: 295 ATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ W+ + PI Y I +A W S +GK T A+++
Sbjct: 631 VRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGKVPGNQTS---ATLK 678
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ ++W+
Sbjct: 679 --LSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWK 736
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
PL NAP + Y++ WR + E + V ++ + + + YE+KVQA+
Sbjct: 737 PLRWMDWNAPQVQYRVQWRPQGTQGAWQEQI-----VSDPLLVVSNTSTFVPYEIKVQAV 791
Query: 469 NDVGPGPESEVV 480
N G GPE ++
Sbjct: 792 NSQGKGPEPQIT 803
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 188/497 (37%), Gaps = 72/497 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y
Sbjct: 260 LVLECIAEGFPTPTIKWLRL-----SGPMPA---DRVTYQNHNKTLQLLNVVEEDDGEYH 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
C A+N L S + +T++ P + +P +S Y G G + C + P+P+ W
Sbjct: 312 CLAENPLG---SDRHVYYVTVEAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTW 366
Query: 124 KKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ +G + + + + +G L++S V D+ + C A N HG L++ +
Sbjct: 367 RINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYI 419
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
Y +LP KI + + T LL A+ G + ++ + E + D
Sbjct: 420 YVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDER 473
Query: 242 LLEITNASFA-------DAGEYECVVK------STVGKISTK-TTVIVEGPPGLPGGVQV 287
TN + D G Y C + V + K T I++GP
Sbjct: 474 FFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRS------- 526
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ K + + +T A + H W ++ E +G + D+Y + +
Sbjct: 527 -AIEKKGSRVAFTCQAYFDSSLQH-----SITWRGDGQDLRE--LG-DSDKYFIEEGRLV 577
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ L + +A +L E + +P P S + + +SW
Sbjct: 578 IHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVS--DQHLLRQSQVRLSW 635
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
P + NAP Y I + K + +L K GN A +++ Y Y +V
Sbjct: 636 SPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSP---YVHYTFRVT 690
Query: 467 AINDVGPG---PESEVV 480
AIN GPG P SE V
Sbjct: 691 AINKYGPGEPSPASETV 707
>gi|47058952|ref|NP_037282.1| neuronal cell adhesion molecule precursor [Rattus norvegicus]
gi|46369979|gb|AAS89825.1| neuronal cell adhesion molecule long isoform Nc17 [Rattus
norvegicus]
Length = 1299
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 374 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 427
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 428 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 483
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 484 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 540
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 541 TRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 593
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 594 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 653
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 654 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 703
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 704 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 763
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 764 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 818
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 819 LNDVGFAPEPAAV 831
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 283 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 334
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 335 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 391
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 392 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVL----- 445
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 446 --AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 497
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 498 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 540
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 53 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 169 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 228
Query: 175 IVL---------------------HGPSYYEQLPPKITI----AAHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 229 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 288
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 289 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 340
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 341 LGAVHHTISVTVKAAP 356
>gi|335306706|ref|XP_003135542.2| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Sus scrofa]
Length = 1257
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 215/492 (43%), Gaps = 64/492 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y I L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIHHGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A +G + C AP P W K
Sbjct: 406 ARNRHGLLLANAYIYVVEL-PAKILTP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDK 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHG 179
+G + R + NG L I + +D+G Y C A N + + K +L G
Sbjct: 464 EGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQG 523
Query: 180 P-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNIN 237
P S E+ ++ C A+ + L + W +G DL EL ++
Sbjct: 524 PRSAIEKKGSRVAFT--------CQAYFDSSLQHSITWRGDG-----QDLRELGDSDKYF 570
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTS 294
I+ G L I + ++D G Y CV + + + ++ ++V G PG ++V + H ++
Sbjct: 571 IEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVSDQHLLRQSQ 630
Query: 295 ATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ W+ + PI Y I +A W S +GK T A+++
Sbjct: 631 VRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGKVPGNQTS---ATLK 678
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ ++W+
Sbjct: 679 --LSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWK 736
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
PL NAP + Y++ WR + E + V ++ + + + YE+KVQA+
Sbjct: 737 PLRWMDWNAPQVQYRVQWRPQGTQGAWQEQI-----VSDPLLVVSNTSTFVPYEIKVQAV 791
Query: 469 NDVGPGPESEVV 480
N G GPE ++
Sbjct: 792 NSQGKGPEPQIT 803
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 188/497 (37%), Gaps = 72/497 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y
Sbjct: 260 LVLECIAEGFPTPTIKWLRL-----SGPMPA---DRVTYQNHNKTLQLLNVVEEDDGEYH 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
C A+N L S + +T++ P + +P +S Y G G + C + P+P+ W
Sbjct: 312 CLAENPLG---SDRHVYYVTVEAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTW 366
Query: 124 KKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ +G + + + + +G L++S V D+ + C A N HG L++ +
Sbjct: 367 RINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYI 419
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
Y +LP KI + + T LL A+ G + ++ + E + D
Sbjct: 420 YVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDER 473
Query: 242 LLEITNASFA-------DAGEYECVVK------STVGKISTK-TTVIVEGPPGLPGGVQV 287
TN + D G Y C + V + K T I++GP
Sbjct: 474 FFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVANLQVKDATQILQGPRS------- 526
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ K + + +T A + H W ++ E +G + D+Y + +
Sbjct: 527 -AIEKKGSRVAFTCQAYFDSSLQH-----SITWRGDGQDLRE--LG-DSDKYFIEEGRLV 577
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ L + +A +L E + +P P S + + +SW
Sbjct: 578 IHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLEVS--DQHLLRQSQVRLSW 635
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
P + NAP Y I + K + +L K GN A +++ Y Y +V
Sbjct: 636 SPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLKLSP---YVHYTFRVT 690
Query: 467 AINDVGPG---PESEVV 480
AIN GPG P SE V
Sbjct: 691 AINKYGPGEPSPASETV 707
>gi|350529383|ref|NP_001129635.2| L1 cell adhesion molecule precursor [Xenopus laevis]
Length = 1246
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 205/479 (42%), Gaps = 39/479 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF---IQDNVLTIRYLNPERDPA 62
D+ CE G P +W NG L+D D Y + + L + + D +
Sbjct: 347 DIILHCEVGGKPKPKVTWKING-------ASLKDSDLYHNWKLSEGSLVLNNMQ-LNDTS 398
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+ QC A+N+ ++A + V+ L P + E + E NV++ C AP PK
Sbjct: 399 VVQCEARNKHGNLLANAFVYVVELPPQILTKNDEQYSVV-EKTNVSMDCKTFGAPMPKIQ 457
Query: 123 WKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W +D N++ + NG L I+ V ++ GIY CTA+N G L V +
Sbjct: 458 WDRDQEDNLLALD-QFSFHTNGTLTITGVVKEHEGIYWCTASNNQGNVNISAYLDVRNAT 516
Query: 181 SYYEQLPPKITIAAHRNLQ--LRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNIN 237
+ P + A + + +C+ + + I W NG+ I N+
Sbjct: 517 KI---ISPPMEQRARKGGKAIFQCTVEFDPKMSSKIIDWKKNGLEINEDPDND----KYF 569
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
I+ L I+N D G Y C+ +S + + ++V P P +++ +TS T+
Sbjct: 570 IEDYTLSISNVQEGDQGMYTCLARSELDSVEQTAELVVIDLPESPSDLELSNAQETSITL 629
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
WT G N PI + I + E + E+ R G + N L P+ Y
Sbjct: 630 TWTPGNENNSPIEEFIIEFEED-------SFEPGVWHELTRVDGDMVTTDLN-LSPYVNY 681
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G S+PS +Y TP P + P + G G ++ ISW+PL N
Sbjct: 682 QFRVIAVNEVGPSNGSNPSDRYRTPPSAPTKNPEEVKGEGTVPENMKISWKPLKGIDWNG 741
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
P+ Y + WR+ +++ E + V + + YE+ VQ++ND+G E
Sbjct: 742 PDFKYLVKWRRLGKDDWREEVAES------PPVIVTETSTFEPYEIIVQSVNDLGRASE 794
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNPERD-P 61
D+ CEA V Y+W ++GE E P ++ + D+ +++ N +D
Sbjct: 52 DIVLKCEAKRNAKVKYTWKKDGETFAPEDGPSVNRKK----DSGSIIISNGNGNAMKDFQ 107
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNP-EAAP 117
Y+C A N+L T S + P ++K RP+E E EG ++ + CNP ++A
Sbjct: 108 GKYRCYATNELGTAISHEIHVITESTPKWQKEMIRPIEVE----EGSSLILPCNPPKSAV 163
Query: 118 KPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMDESKGRLI 175
P+ +W + I R + NGNL S V + D+ Y C A V + I
Sbjct: 164 PPRVIWMNSSLLHITQDKRVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQKEAI 223
Query: 176 VLH-GPSYY------EQLPPK---ITIAAHRN--LQLRCSAHTEELLDVAYIWTHNGVRI 223
+ P+ E + P+ T+ A R+ LQL C A ++ +I
Sbjct: 224 SIKVRPTNSVKFRRPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLTGSTTN 283
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + L I D G+Y+C K+T G + TV+VE P
Sbjct: 284 GHIQYDDFKK--------TLHIDKVQDDDDGDYQCTAKNTQGTATHTFTVVVESAP 331
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 26/152 (17%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC AKN T + + V+ P + +P++ GE ++ + C PKPK W
Sbjct: 308 YQCTAKNTQGTATHTFTV-VVESAPYWINKPMDGIYAPGE--DIILHCEVGGKPKPKVTW 364
Query: 124 KKDGNIIGSGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
K +G S ++ N G+L+++ + +D+ + C A N HG ++ +
Sbjct: 365 KING---ASLKDSDLYHNWKLSEGSLVLNNMQLNDTSVVQCEARNKHGN-------LLAN 414
Query: 179 GPSYYEQLPPKI--------TIAAHRNLQLRC 202
Y +LPP+I ++ N+ + C
Sbjct: 415 AFVYVVELPPQILTKNDEQYSVVEKTNVSMDC 446
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
YE V + N+LG S P P ++ D P +P +G + ++W P+ ++
Sbjct: 779 YEIIVQSVNDLGRA--SEPKPIIGHSGEDFPDISPENVGLEAMNESAIKVAWLPVQKQGL 836
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N + +++ + Q++ L+ +GN A++ F + Y V+V +N GPG
Sbjct: 837 NGHLKGFMVYYISHSSRHRQTKELRVHGNTTHALITGLKPF--SNYSVEVAIMNGKGPGD 894
Query: 476 ESEVVTIWHD-----PLVIISYVCQGDLKLCL 502
SE I D P + Q D L L
Sbjct: 895 RSESRMIRTDEGVPSPPSFLHLERQSDTSLTL 926
>gi|49119255|gb|AAH73282.1| L1cam-a protein [Xenopus laevis]
Length = 1225
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 205/479 (42%), Gaps = 39/479 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF---IQDNVLTIRYLNPERDPA 62
D+ CE G P +W NG L+D D Y + + L + + D +
Sbjct: 326 DIILHCEVGGKPKPKVTWKING-------ASLKDSDLYHNWKLSEGSLVLNNMQ-LNDTS 377
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+ QC A+N+ ++A + V+ L P + E + E NV++ C AP PK
Sbjct: 378 VVQCEARNKHGNLLANAFVYVVELPPQILTKNDEQYSVV-EKTNVSMDCKTFGAPMPKIQ 436
Query: 123 WKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W +D N++ + NG L I+ V ++ GIY CTA+N G L V +
Sbjct: 437 WDRDQEDNLLALD-QFSFHTNGTLTITGVVKEHEGIYWCTASNNQGNVNISAYLDVRNAT 495
Query: 181 SYYEQLPPKITIAAHRNLQ--LRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNIN 237
+ P + A + + +C+ + + I W NG+ I N+
Sbjct: 496 KI---ISPPMEQRARKGGKAIFQCTVEFDPKMSSKIIDWKKNGLEINEDPDND----KYF 548
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
I+ L I+N D G Y C+ +S + + ++V P P +++ +TS T+
Sbjct: 549 IEDYTLSISNVQEGDQGMYTCLARSELDSVEQTAELVVIDLPESPSDLELSNAQETSITL 608
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
WT G N PI + I + E + E+ R G + N L P+ Y
Sbjct: 609 TWTPGNENNSPIEEFIIEFEED-------SFEPGVWHELTRVDGDMVTTDLN-LSPYVNY 660
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+VIA NE+G S+PS +Y TP P + P + G G ++ ISW+PL N
Sbjct: 661 QFRVIAVNEVGPSNGSNPSDRYRTPPSAPTKNPEEVKGEGTVPENMKISWKPLKGIDWNG 720
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
P+ Y + WR+ +++ E + V + + YE+ VQ++ND+G E
Sbjct: 721 PDFKYLVKWRRLGKDDWREEVAES------PPVIVTETSTFEPYEIIVQSVNDLGRASE 773
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNPERD-P 61
D+ CEA V Y+W ++GE E P ++ + D+ +++ N +D
Sbjct: 31 DIVLKCEAKRNAKVKYTWKKDGETFAPEDGPSVNRKK----DSGSIIISNGNGNAMKDFQ 86
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNP-EAAP 117
Y+C A N+L T S + P ++K RP+E E EG ++ + CNP ++A
Sbjct: 87 GKYRCYATNELGTAISHEIHVITESTPKWQKEMIRPIEVE----EGSSLILPCNPPKSAV 142
Query: 118 KPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMDESKGRLI 175
P+ +W + I R + NGNL S V + D+ Y C A V + I
Sbjct: 143 PPRVIWMNSSLLHITQDKRVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQKEAI 202
Query: 176 VLH-GPSYY------EQLPPK---ITIAAHRN--LQLRCSAHTEELLDVAYIWTHNGVRI 223
+ P+ E + P+ T+ A R+ LQL C A ++ +I
Sbjct: 203 SIKVRPTNSVKFRRPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLTGSTTN 262
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + L I D G+Y+C K+T G + TV+VE P
Sbjct: 263 GHIQYDDFKK--------TLHIDKVQDDDDGDYQCTAKNTQGTATHTFTVVVESAP 310
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 26/152 (17%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC AKN T + + V+ P + +P++ GE ++ + C PKPK W
Sbjct: 287 YQCTAKNTQGTATHTFTV-VVESAPYWINKPMDGIYAPGE--DIILHCEVGGKPKPKVTW 343
Query: 124 KKDGNIIGSGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
K +G S ++ N G+L+++ + +D+ + C A N HG ++ +
Sbjct: 344 KING---ASLKDSDLYHNWKLSEGSLVLNNMQLNDTSVVQCEARNKHGN-------LLAN 393
Query: 179 GPSYYEQLPPKI--------TIAAHRNLQLRC 202
Y +LPP+I ++ N+ + C
Sbjct: 394 AFVYVVELPPQILTKNDEQYSVVEKTNVSMDC 425
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 10/152 (6%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
YE V + N+LG S P P ++ D P +P +G + ++W P+ ++
Sbjct: 758 YEIIVQSVNDLGRA--SEPKPIIGHSGEDFPDISPENVGLEAMNESAIKVAWLPVQKQGL 815
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N + +++ + Q++ L+ +GN A++ F + Y V+V +N GPG
Sbjct: 816 NGHLKGFMVYYISHSSRHRQTKELRVHGNTTHALITGLKPF--SNYSVEVAIMNGKGPGD 873
Query: 476 ESEVVTIWHD-----PLVIISYVCQGDLKLCL 502
SE I D P + Q D L L
Sbjct: 874 RSESRMIRTDEGVPSPPSFLHLERQSDTSLTL 905
>gi|449490686|ref|XP_004174215.1| PREDICTED: LOW QUALITY PROTEIN: neurofascin-like, partial
[Taeniopygia guttata]
Length = 1044
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 210/495 (42%), Gaps = 56/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMY 64
D C A G P + W NGE + S + R D TI + + + A+Y
Sbjct: 371 DGRLVCRANGNPKPSIQWLVNGEPIESSP---PNPSREVAGD---TIVFRDTQIGSSAVY 424
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL + P P + + C +P P W
Sbjct: 425 QCNASNEHGYLLANAFVSVLDVPPRILG-PRNQLIRVIQNNRTRLDCPFFGSPIPTLRWF 483
Query: 125 KDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
K+G N + GG K ENG+L + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 484 KNGQGNTL-DGGNYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEAQVRLEV-KDPTR 541
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI---GNMDLNELETPNINID 239
+ P + +L C + L + W + + M E D
Sbjct: 542 IVRGPEDQVVKRGTMPRLHCRVKHDPTLRLMVTWLKDDAPLYLGSRMKKEE--------D 593
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG------------LPGGVQV 287
G L I + D G+Y CV + + K K + V P P +++
Sbjct: 594 G--LTIYGVTEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRLRDLPKERPDRPRDLEL 651
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEA 345
++ + S + W G N PIT Y + + W N S RY G +
Sbjct: 652 TDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHS---------RYPGSVNS 702
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I
Sbjct: 703 AVLS-LSPYVNYQFRVIAVNDVGSSVPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEI 761
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
+W PL + PN+ Y + WR+++ + +ET++ +V V P Y YE+K
Sbjct: 762 TWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVRGARHV---VWNTP---IYVPYEIK 815
Query: 465 VQAINDVGPGPESEV 479
VQA ND G PE +
Sbjct: 816 VQAENDFGRAPEPDT 830
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 106/286 (37%), Gaps = 40/286 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L LE+ ++ NV E D Y
Sbjct: 281 DLLLECIASGVPAPDIMWYKKGGELPVGKTKLENFNKALRISNV-------SEEDSGEYF 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P G+ G + C PKP W
Sbjct: 334 CLASNKMGSIRHTISVRV-KAAPYWMNEPENLILAPGKDGR--LVCRANGNPKPSIQWLV 390
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I S E I V RD S +Y C A+N HG + + VL
Sbjct: 391 NGEPIESSPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 444
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+I RN +R + LD + W NG N L+
Sbjct: 445 ---DVPPRIL--GPRNQLIRVIQNNRTRLDCPFFGSPIPTLRWFKNG------QGNTLDG 493
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
N + G LE+ A D G Y CV + +GK + + V+ P
Sbjct: 494 GNYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEAQVRLEVKDP 539
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 120/314 (38%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHSGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSKSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPV-SRDDSGIYSCTAT--NVHGMDES-- 170
P+P W I R NG+L S V ++D YSC A H + +
Sbjct: 170 PEPVIFWMSSSMEPIPQDKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNP 229
Query: 171 -----------------------KGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAH 205
+ R I PS+ + R +L L C A
Sbjct: 230 YTLKVKTKKSHNETSLGNSPAMYRARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIAS 289
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
D+ +W G G + + + + N N L I+N S D+GEY C+ + +G
Sbjct: 290 GVPAPDI--MWYKKG---GELPVGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMG 341
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 342 SIRHTISVRVKAAP 355
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G ++ + C P P +W K G + G + N L IS VS +DSG Y C A+
Sbjct: 278 RGVDLLLECIASGVPAPDIMWYKKGGELPVGKTKLENFNKALRISNVSEEDSGEYFCLAS 337
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + V P Y+ P + +A ++ +L C A+ + W NG
Sbjct: 338 NKMGSIRHTISVRVKAAP-YWMNEPENLILAPGKDGRLVCRANGNPKPSIQ--WLVNGEP 394
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
I + N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 395 IESSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 450
Query: 282 PGG----VQVVEVHKT 293
G ++V++ ++T
Sbjct: 451 LGPRNQLIRVIQNNRT 466
>gi|1842431|gb|AAB47755.1| ankyrin binding cell adhesion molecule NrCAM [Rattus norvegicus]
Length = 1215
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 380 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 433
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 434 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 489
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 490 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 546
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 547 TRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 599
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 600 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 659
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 709
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 710 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 769
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 770 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 824
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 825 LNDVGFAPEPAAV 837
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 289 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 340
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 341 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 397
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 398 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 453
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 454 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 503
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 504 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 546
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 59 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 115
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 116 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 174
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 175 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 234
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 235 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 294
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 295 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 346
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 347 LGAVHHTISVTVKAAP 362
>gi|38372401|sp|P97686.2|NRCAM_RAT RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
AltName: Full=Ankyrin-binding cell adhesion molecule
NrCAM; AltName: Full=Neuronal surface protein Bravo;
Short=rBravo; AltName: Full=NgCAM-related cell adhesion
molecule; Short=Ng-CAM-related; Flags: Precursor
Length = 1214
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 379 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 432
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 433 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 488
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 489 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 545
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 546 TRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 598
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 599 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 658
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 659 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 708
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 709 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 768
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 769 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 823
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 824 LNDVGFAPEPAAV 836
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 288 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 339
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 340 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 396
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 397 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 453 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 502
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 503 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 234 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 294 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 346 LGAVHHTISVTVKAAP 361
>gi|119609533|gb|EAW89127.1| sidekick homolog 2 (chicken), isoform CRA_b [Homo sapiens]
Length = 1801
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 186/431 (43%), Gaps = 32/431 (7%)
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
M+QC A+N +S L V ++ P+ + PL+S +G +V + C AP+P
Sbjct: 1 MFQCFARNAAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAIT 58
Query: 123 WKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W+K I+ SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V
Sbjct: 59 WQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW- 117
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
+ + P ++ + C + + + YIW +G +G P I +
Sbjct: 118 ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRL 172
Query: 239 D-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSA 295
D G L I+ D G Y C V S G S + V P P + V + +
Sbjct: 173 DRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAI 232
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ WT P+ Y I+ + N+ W V+ VD + + LVP
Sbjct: 233 NLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPAR 283
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+Y+F++ A N++G G+ S + + + P + P P + G + I W+P P Q
Sbjct: 284 SYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQ 343
Query: 416 NAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
N Y I + +F++ T + N+ + + I +T YE++V A N G
Sbjct: 344 NGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAG 398
Query: 473 PGPESEVVTIW 483
G S VT W
Sbjct: 399 LGVYSSKVTEW 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 47 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 103
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 104 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 160
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 161 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 220
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 221 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 270
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 271 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 330
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 331 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 379
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 380 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 438
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 439 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 498
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 499 TTPGDGPRS 507
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 39/282 (13%)
Query: 220 GVRIGNMDLNELET------PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273
G RI + N T PN+ ++ +T + E ++ G+ +
Sbjct: 551 GYRISWEEYNRTNTRVTHYLPNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 607
Query: 274 IVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFN 326
I G PP LPG + + + S T+Q+ G I+ + + A+ W
Sbjct: 608 ISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLL 667
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
+ H + E D + + + L P++ Y F++ N +G PS PS + T P
Sbjct: 668 I--HQLSNEPDA----RSMEVPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPP 720
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGN 444
AP+ + L + W PLP + N ++ YKI K + ++ +TL
Sbjct: 721 DMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH--- 774
Query: 445 VGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ R+ ++ +TEY V+VQA N +G GP S+ V
Sbjct: 775 --VVQDRVERDYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTV 814
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1456 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1512
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1513 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1546
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1219 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1277
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1278 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1332
Query: 474 GPES 477
GP S
Sbjct: 1333 GPRS 1336
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1026 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1084
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1085 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1132
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1133 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1192
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1193 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1235
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 925 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 983
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 984 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1035
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1036 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1093
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1094 --TSYKFRVKATNDIG 1107
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 716 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 773
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 774 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 825
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 826 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 884
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 885 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 913
>gi|66393077|ref|NP_571436.1| neural cell adhesion molecule L1.2 precursor [Danio rerio]
gi|36143027|gb|AAQ85080.1| neural adhesion molecule L1.2 [Danio rerio]
Length = 1271
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 217/474 (45%), Gaps = 31/474 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G+P +W NG LL+ ++ R ++ VLT++ + D A++QC+A +
Sbjct: 368 CKADGIPKPEVTWSINGILLSD----IDPDPRRSVKHGVLTLKNVE-LSDTAVFQCKAAS 422
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYA-GEGGNVTIFCNPEAAPKPKFVWKKDG-N 128
+ + +A + V+ L P + Y+ EG + C +P+P W+ +
Sbjct: 423 KHGSVLINAYVYVIELPPQILTE--DGLMYSVAEGQTTELACETFGSPRPNVTWEGESWG 480
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ + R +G+L IS S +DSG Y+CT N ++ L VL+ + + P
Sbjct: 481 ALVANQRMIQLSDGSLQISNASLNDSGQYTCTVNNSKITITAE--LDVLNK-TVIVKPPL 537
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ I + L C + D+ + W N ++ ++ ID L I
Sbjct: 538 ALRIQRGKPATLTCEYQVDSRQDLPQVQWRKNMQKLTESS----DSDKYMIDESTLIIPE 593
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
D G Y C V +T+ ++ + P P +Q+ E + T+ WT GA +
Sbjct: 594 VEEEDEGIYTCEVITTLDMAKASGSITIVDRPDPPSLIQMTEPKERRVTLSWTPGADHNS 653
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT-GRKEASIENVLVPWSTYEFKVIAGNE 366
P+ Y I + T + E +E+ R + + A++ L P+ +Y F+VIA NE
Sbjct: 654 PVLEYLI----EFEETGSDRKEW---EELSRVSCSSQRATLP--LKPFISYRFRVIAINE 704
Query: 367 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426
+G +PS + Y+TPA P P + + G L I+W+ + R N P+ +YK+ W
Sbjct: 705 IGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDEPGTLVITWKEMDRRSFNGPDFHYKVMW 764
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
RK + T K+ + V + + ++ +++KVQA+N++G GPE + +
Sbjct: 765 RKVLGSGPSWHT-KDITSPPFVVTDVGN---FSAFDIKVQAVNEMGEGPEPKSI 814
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 9/223 (4%)
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKP 119
P+ + K +K SS+ V +P + S +Y G N+ + C + P P
Sbjct: 227 PSARVIKLKEPIKLTVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSP 286
Query: 120 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W + ++ K + L +S D G Y CTATN GM R+ V
Sbjct: 287 SIQWIRKDGVLSESRTTKDSNDRVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAA 346
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
P Y+ + P A ++L C A +V W+ NG+ + ++D + P ++
Sbjct: 347 P-YWIKEPKSQLYAPGETVKLECKADGIPKPEVT--WSINGILLSDIDPD----PRRSVK 399
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
G+L + N +D ++C S G + V ++E PP +
Sbjct: 400 HGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQI 442
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 115/297 (38%), Gaps = 40/297 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNPERDPA 62
D+T TC+A G P T+ W ++G E P +D D +D+ LT + +
Sbjct: 68 DITLTCDATGNPPPTFRWVKDG----VEFDPSKDPDLSVSRDSGTFSLTAKDGPIHQYQG 123
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKF 121
Y C A N+L T S+ V P+ + + ++ EG +V + CN P P
Sbjct: 124 RYNCYASNELGTAVSNEARIVTENTPTLQTEKIITKKVE-EGESVVLPCNPPNGTVAPVI 182
Query: 122 VW-KKDGNIIGSGGRRKIFENGNLLISPV----SRDDSGIYSCT----ATNVHGMDESKG 172
W K I R +GNL SRDD Y+C + V + E
Sbjct: 183 HWMDKKLRHIQQNERVIQGRDGNLYFPHATVADSRDD---YTCNIQFPSARVIKLKEPI- 238
Query: 173 RLIVLHGPSYYEQLPPKIT----------IAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
+L V S P++ + + +NL+L C + +I +GV
Sbjct: 239 KLTVSSSNSVVRNRRPQMMRPTGSSSSYLVLSGQNLELECIVQGLPSPSIQWI-RKDGV- 296
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
L+E T + D +L N S D GEY+C + G + V VE P
Sbjct: 297 -----LSESRTTKDSND-RVLRFQNISETDGGEYQCTATNPQGMSTHTYRVTVEAAP 347
>gi|350591366|ref|XP_003132378.3| PREDICTED: contactin-6 [Sus scrofa]
Length = 588
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 140/300 (46%), Gaps = 12/300 (4%)
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 243
P K+ + ++ L C + ++V ++W+ NG I DL + I G G L
Sbjct: 65 PSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI---DLKKGVAHFERIGGESVGDL 121
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 303
I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G+
Sbjct: 122 MIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGS 181
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI + I ART ++ W VS + G + L PW YEF+V+A
Sbjct: 182 DNNSPIQIFSIQARTPFSVGWQAVS-----TVPEILNGLTYNATVVGLNPWVEYEFRVVA 236
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
GN +G GEPS PS T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 237 GNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYI 296
Query: 424 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
I R T + + + V R S + +EVKV N+ G G S ++
Sbjct: 297 IMLRPVGSTTWTKARVPSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGALSTASIVY 355
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 162/431 (37%), Gaps = 48/431 (11%)
Query: 74 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIG 131
T+ S ++ V+T+ PS + + GE ++ + C P + FVW +G++I
Sbjct: 51 TKDSGSKRTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSIEVVFVWSFNGDVID 102
Query: 132 SGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
FE G+L+I + + SG Y CT + +IV P E
Sbjct: 103 LKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPED 162
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ + + L R + + + I +G ++ + P I ++G
Sbjct: 163 VRVEHISSTTSQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTV--PEI-LNGLTYNA 219
Query: 246 TNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
T EYE V +++G + TK +V V P + GG ++
Sbjct: 220 TVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGG----SRSE 275
Query: 295 ATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
I W + NG Y I+ R ++TW V E R+ R E+ +
Sbjct: 276 LVITWESIPEELQNGEEF-GYIIMLRPVGSTTW--TKARVPSVESSRFVYRNES-----I 327
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
+P S +E KV N G G S+ S Y+ D+P AP ++ +SW +
Sbjct: 328 IPLSPFEVKVGVYNNEGEGALSTASIVYSG-EDEPQLAPRGTSVQSFSASEMEVSWNAIA 386
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ + Y+I + + E ++ GNV I T Y V+A N
Sbjct: 387 WNRNTGRVLGYEILYWTDDSKESMIGKVRVSGNV--TTKNITGLKANTVYFASVRAYNTA 444
Query: 472 GPGPESEVVTI 482
G GP S V +
Sbjct: 445 GTGPSSPPVNV 455
>gi|194218739|ref|XP_001492769.2| PREDICTED: protein sidekick-1 [Equus caballus]
Length = 2113
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 202/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 313 CQAMGVPLPTLQWYKDAISISK----LQNPRYKVLSSGGLRIQKLRPE-DSGIFQCFATN 367
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F + P++ T +G + C APKP +WK+ +I+
Sbjct: 368 EGGEIQTHTYLDVTNVAPAFTQLPVD--TTVTDGMTAILKCEVSGAPKPAIMWKRGNHIL 425
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 426 ASGSVRIPRFMLLESGGLQITPVFIQDAGNYTCYAANTEGSLNASAALTVWNRTSIINPP 485
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I L C A + + + Y+W + V I + + + DG LL I+
Sbjct: 486 EDRVVIKG-TTATLDCGATHDPRISLRYVWKKDNVVITPSSSSRIV---VEKDGSLL-IS 540
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + H + + W
Sbjct: 541 QTWSGDIGDYTCEIISEGGNDSRMARLEVIELPHSPQNLLASLNSAHSHTVMLSWVRPFD 600
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y I+ + NS W V +G E+ R L P TY+F+V A
Sbjct: 601 GNSPVLYY-IVELSENNSPW-KVHLSNVGPEMTGVAVRG-------LTPARTYQFRVCAV 651
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 652 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 711
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 712 RYRLAGLPGEYQQRNIT---SPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVT 766
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 107/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++T C A P D++ SW RNG + S L R+ N + D
Sbjct: 214 SEVTLECIANARPVEDLSVSWKRNGVRITSG---LHSFGRHLTISNPTS-------SDTG 263
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A + + + A L ++ P F P ES V I C P P
Sbjct: 264 VYVCEATLRGSAFEPARAKAFLSIIE-PPYFTAEP-ESRILVEVEETVDIVCQAMGVPLP 321
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C ATN G ++ L V
Sbjct: 322 TLQWYKDAISISKLQNPRYKVLSSGGLRIQKLRPEDSGIFQCFATNEGGEIQTHTYLDVT 381
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + QLP T+ L+C + +I VRI L
Sbjct: 382 NVAPAFTQLPVDTTVTDGMTAILKCEVSGAPKPAIMWKRGNHILASGSVRIPRFML---- 437
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+IT DAG Y C +T G ++ + V
Sbjct: 438 -----LESGGLQITPVFIQDAGNYTCYAANTEGSLNASAALTV 475
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P + V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1805 EGSPGAPRHISVTKA-ASELTLQWTEGDAGKAPTTGYVIEARPSDEGLW-----DMFAKD 1858
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A N++GYGEPS PS + + P+
Sbjct: 1859 IPRSATSYTVSLDR-LRQGVTYEFRVVAVNQVGYGEPSRPSTAVSAQVETPF 1909
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 103/266 (38%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 27 LVLTCLAEGSWPLEFKWMHN----DSELTTYTSEYKYIIP----SLQRL----DAGFYRC 74
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ +A + I + P+P+ W
Sbjct: 75 VVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQGHAAILNLLPI----TSCPRPQVTW 130
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL---HGP 180
++G+ I R I L+I + DSG Y A N + LI L
Sbjct: 131 FREGHKIIPSNRIAITLENQLVILAAAASDSGPYYVQAVNERNGENKTSPLIYLSVARDV 190
Query: 181 SYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I I A + L C A+ + D++ W NGVRI
Sbjct: 191 GTPETMAPVIVITPGNRSVVAGSSEVTLECIANARPVEDLSVSWKRNGVRI--------- 241
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + +D G Y C
Sbjct: 242 TSGLHSFGRHLTISNPTSSDTGVYVC 267
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 36/219 (16%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
EV S +QW G+ PI ++ + + R W + ++S EV+R
Sbjct: 1394 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACEVER------ 1447
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
L P+++Y+ ++ A N++G + S + T D P + PS I +
Sbjct: 1448 ------LRPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPSFISVTPHTTSSVL 1501
Query: 405 ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 448
I W+P E N Y+I++R+ + + +S+TLK + V +
Sbjct: 1502 IQWQPPRDESLNGLLQGYRIYYRELEYEAASATESKTLKTPSALRAELTAQSSFKTVNSS 1561
Query: 449 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
E Y YEV + A N +G P S V ++
Sbjct: 1562 STLTTYELTHLRKYRRYEVVMTAYNIIGESPASAPVEVF 1600
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 96/231 (41%), Gaps = 39/231 (16%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
T +T+ PP LPG + + + SAT+Q+ G I+ + I +
Sbjct: 962 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIIEGQVG------ 1015
Query: 326 NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1016 -----AIGDEEEWVSLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRV 1070
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 435
T P AP+ + L + W PLP + N ++ Y+I +WR + Q
Sbjct: 1071 IQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRP----DLQ 1126
Query: 436 SETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
S L + N R+ EF +TEYE+++QA N +G GP SEVV
Sbjct: 1127 SPALTQVIND-----RLEREFTIEELEEWTEYELQMQAFNAIGAGPWSEVV 1172
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 22/230 (9%)
Query: 267 ISTKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIAR-TNWN 321
+ T+ ++ PG P V H TS+ IQW D + NG + Y+I R +
Sbjct: 1471 VETEAVTTLQDVPGEPPSFISVTPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELEYE 1529
Query: 322 STWFNVSEHVIGKEVDRYTGRKEASIENV-------------LVPWSTYEFKVIAGNELG 368
+ S+ + R ++S + V L + YE + A N +G
Sbjct: 1530 AASATESKTLKTPSALRAELTAQSSFKTVNSSSTLTTYELTHLRKYRRYEVVMTAYNIIG 1589
Query: 369 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 428
S+P + A P AP + L ++W+P P E QN YKI++ +
Sbjct: 1590 ESPASAPVEVFVGEA-APALAPQNVQVNPLTASQLEVTWDPPPPESQNGNIQGYKIYYWE 1648
Query: 429 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
D+ ++E +K A V++ + +T+Y V + A N G GP+S+
Sbjct: 1649 A-DSRNETEKMKVLFLPETA-VKLKNLTSHTKYLVSISAFNAAGDGPKSD 1696
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 25/197 (12%)
Query: 85 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSG----GRRKI 138
T+ P P AG VT+ C A P WK++G I SG GR
Sbjct: 195 TMAPVIVITPGNRSVVAG-SSEVTLECIANARPVEDLSVSWKRNGVRITSGLHSFGR--- 250
Query: 139 FENGNLLISPVSRDDSGIYSCTAT---NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH 195
+L IS + D+G+Y C AT + +K L ++ P + + +I +
Sbjct: 251 ----HLTISNPTSSDTGVYVCEATLRGSAFEPARAKAFLSIIEPPYFTAEPESRILVEVE 306
Query: 196 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAG 254
+ + C A L + W + + I ++L+ P + G L I D+G
Sbjct: 307 ETVDIVCQAMGVPLPTLQ--WYKDAISI-----SKLQNPRYKVLSSGGLRIQKLRPEDSG 359
Query: 255 EYECVVKSTVGKISTKT 271
++C + G+I T T
Sbjct: 360 IFQCFATNEGGEIQTHT 376
>gi|47215393|emb|CAG01090.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1958
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 200/483 (41%), Gaps = 45/483 (9%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLK 73
G P W+++ ++ +P RY + L I L P+ D M+QC A+N
Sbjct: 52 GTPQPDIVWYKDAAPISPVKIP-----RYRVLVGGSLQINGLLPD-DTGMFQCFARNLAG 105
Query: 74 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG 133
++ L V ++ P+ P +S +G +V + C AP+P W+K ++ SG
Sbjct: 106 EIQTNTYLAVTSIAPNITAGPADSAVI--DGTSVILHCETSGAPRPAITWQKGERVLASG 163
Query: 134 G----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 189
R + E+G+LLISP D+G Y+C A+N G+DE+ L+V + + P
Sbjct: 164 SVQLPRFTLLESGSLLISPSHLSDAGTYTCMASNSRGIDEASADLLVW-ARTRITKPPQD 222
Query: 190 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEITNA 248
++ + C + + V ++W +G I D+N +P + +D G L I+
Sbjct: 223 QSVIKGTKAVMACGVAHDPSVTVRHVWEKSGTAI---DVNA--SPRLRLDPDGTLHISQT 277
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNG 306
D G Y C V S G S + V P P + K + + W
Sbjct: 278 WSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPVALLSTTEKRAINLTWAQAFDGN 337
Query: 307 RPITHYKIIARTN---WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N W N+ G V L+P +Y+F++ A
Sbjct: 338 SPLIRYILEVSENNAPWTVLLANIEPESTGVTV------------GGLIPARSYQFRLCA 385
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + P + P P + G + I W+P P QN P Y
Sbjct: 386 VNDVGRGQFSKETDRLTLPEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGYI 445
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + D + ++ T + ++ + + I +T YE++V A N G G S V
Sbjct: 446 IRYCLSGLPVDCQMKNITNPDQNSLLLEDLII-----WTNYEIEVAAYNGAGRGTYSHKV 500
Query: 481 TIW 483
T W
Sbjct: 501 TEW 503
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + T+ T+ WT G PIT Y I AR + W ++ I KEV YT E
Sbjct: 1612 ISRYGTALTLHWTSGDQGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTLNLEMLR 1670
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
E V TY+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1671 EGV-----TYDFRVIAVNDYGYGTPSAPSPSISAQKVSPF 1705
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 178/485 (36%), Gaps = 42/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L R+ + ++ + + D Y C A N
Sbjct: 141 CETSGAPRPAITWQKGERVLASGSVQLP---RFTLLESGSLLISPSHLSDAGTYTCMASN 197
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V + K P + G + + + + VW+K G I
Sbjct: 198 SRGIDEASADLLVWA-RTRITKPPQDQSVIKGTKAVMACGVAHDPSVTVRHVWEKSGTAI 256
Query: 131 --GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R ++ +G L IS D G Y+C T+V G D L V P E
Sbjct: 257 DVNASPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQLPHAPENPVA 316
Query: 189 KITIAAHRNLQLRC-------SAHTEELLDVA---YIWTHNGVRIGNMDLNELETPNINI 238
++ R + L S +L+V+ WT V + N+ E E+ + +
Sbjct: 317 LLSTTEKRAINLTWAQAFDGNSPLIRYILEVSENNAPWT---VLLANI---EPESTGVTV 370
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
GGL+ + F + V + K + + T+ E P P V S IQ
Sbjct: 371 -GGLIPARSYQFRLCAVND-VGRGQFSKETDRLTLPEEPPSAPPQTVIASGRTNQSIMIQ 428
Query: 299 WT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI--ENVLVP 353
W + NG P+ Y I + +S + ++ T + S+ E++++
Sbjct: 429 WQPPPESHQNG-PLQGYIIR---------YCLSGLPVDCQMKNITNPDQNSLLLEDLII- 477
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
W+ YE +V A N G G S ++ T P P + + ++W +
Sbjct: 478 WTNYEIEVAAYNGAGRGTYSHKVTEW-TLQGVPTVPPGNVHAEAVNSTTVRLTWSAPSPQ 536
Query: 414 KQNAPNIYYKIF-WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
N N YK+ W E T++ I V I +TEY V G
Sbjct: 537 FINGINQGYKLLAWEPGRTNEASMVTVRPNFQDSIHVGHISGLKKFTEYYTSVLCFTTPG 596
Query: 473 PGPES 477
GP S
Sbjct: 597 DGPRS 601
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 27/208 (12%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+V + W G+ P+ +Y + +R +S W V + E Y I
Sbjct: 1159 DVQARRVLLSWEPGSDGLSPVRYYTVQSRELPDSNW-TVHSASVSHETHSY-------IV 1210
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+++Y+F+V + N++G E S S T D P +AP+ + + + W+
Sbjct: 1211 TRLKPFTSYQFRVKSTNDIGDSEYSQESEAITTLQDAPDRAPTILSVTPHTTTSVLVRWQ 1270
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN--------VGIAVVRIPSEFYYTE 460
P + N + +++ +R+ + ++ T++ + + +R SE T+
Sbjct: 1271 PPSEDHINGVLLGFRVRYRELHYDRLRTFTVRTVNSPSTNWADLTALYSIRNLSESSLTQ 1330
Query: 461 -----------YEVKVQAINDVGPGPES 477
YEV++ N VG GP S
Sbjct: 1331 YELDKLSKHKRYEVRLSVYNAVGEGPIS 1358
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
V HVI ++R E +IE+ L W+ YE +V A N +G G S P T P
Sbjct: 871 VLSHVIMDRLER-----EFTIED-LEEWTEYEVRVQAINGIGSGPWSQPV-HGRTRESVP 923
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 446
P+ + + + W +P +N + YK+ +++K D++ + GN
Sbjct: 924 SSGPANVSAFATTSSSILVRWGEVPHADRNGLILGYKVVYKEK-DSDTAPSSWSVEGNTS 982
Query: 447 IAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ V++ Y YE++V A +G G S
Sbjct: 983 HS-VQLTGLGKYVLYEIQVLAFTRIGDGRSS 1012
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 265 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
G++S T I G PP LPG + + + T+Q+ G I+ + + A+
Sbjct: 695 GQLSAST--ISSGVPPELPGPPTNLAISNIGPRFVTLQFKPGYDGKTSISCWVVEAQARC 752
Query: 321 NSTWFNVSEHVIGKEVDRYTGRKEA-SIENV-LVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
++ + E+ V + + +A S+E + L P++ Y F++ N +G P S +
Sbjct: 753 STAIGVIGENEEWLLVHQLSNEPDARSLEVLDLNPYTFYRFRMRQVNIVGNESPKSAFQK 812
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA-PNI--YYKIFWRKKNDTEFQ 435
A P + + W PLP + N P++ Y +W+ +
Sbjct: 813 DRNTAGLSRCLPRQRDAAYSQRDQPVARWVPLPEWEYNGNPDLVGYRVQYWKAGSKGGVL 872
Query: 436 SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
S + + R+ EF +TEYEV+VQAIN +G GP S+ V
Sbjct: 873 SHVIMD---------RLEREFTIEDLEEWTEYEVRVQAINGIGSGPWSQPV 914
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FW--RKKNDTE-FQSE 437
P P P + L ++W+P P + QN YK+ FW + +N+TE ++
Sbjct: 1398 PVLVPTSPPLNVMVQSSTATQLDVTWDPPPLDAQNGDIQGYKVYFWEYQLRNETERLRTL 1457
Query: 438 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
L E G V++ + YT Y + V A N G GP S
Sbjct: 1458 FLPELG------VKLKNLTGYTTYMISVAAFNAAGDGPRS 1491
>gi|358254604|dbj|GAA55926.1| neuroglian, partial [Clonorchis sinensis]
Length = 2525
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 193/432 (44%), Gaps = 38/432 (8%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ +TC A G P W NG+ + D R +Q NV+ + L +D A+ QC
Sbjct: 158 VIFTCTATGDPAPQIRWTVNGQ----DPSTYLDGVRKTLQGNVMHLYNLT-VKDTAVIQC 212
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N + +A L V+ P F K P ++E +G VTI+C +APK W KD
Sbjct: 213 NASNAFGYDFVNAYLNVMREPPYFIKPP-QAEQRVVDGHEVTIYCQTFSAPKALISWTKD 271
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G I SGGR + G+L IS V+ DSG+Y CTATN G ++ GRL+V S
Sbjct: 272 GRPI-SGGRYRSLITGDLKISSVAITDSGVYECTATNPFGSRKASGRLLVRRRTSIVLA- 329
Query: 187 PPKITIAAHRNLQLRCSAHTE--ELLDVAYIWTHNGVRIGNMDLNELE---TPNIN---I 238
P + + ++ C+A T+ EL ++ W D N +E TP I
Sbjct: 330 PIDTQVYEDQVVKFVCTAETDPMELHNLEITWYK--------DDNLIEPNLTPRIQQIWF 381
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP--GLPGGVQVVEVHKTS-A 295
D L+ ++ A D G+Y C + + +++V+G P + V E K A
Sbjct: 382 DYSLV-LSGAQPRDTGQYRCNASNGLDYAVASASLLVQGRPEKAIRVEVNCAEFIKDELA 440
Query: 296 TIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEA-SIENVLVP 353
+ W G+ N PI Y + T + TW+ E+ YTG ++ SI+ VL P
Sbjct: 441 LVSWYPGSDNYAPIMEYIVEYSTQYERDTWYPA-------EIFNYTGLVQSTSIKVVLRP 493
Query: 354 WSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
Y+F++ N +G PS + S PA P PS + G +L I W +P
Sbjct: 494 AILYQFRIRTRNRVGVSLPSVATSTACGIPARVPATNPSELYIYGSLRNNLIIKWTTMPY 553
Query: 413 EKQNAPNIYYKI 424
+ N+ Y +
Sbjct: 554 IEHYGSNLGYTL 565
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 148/382 (38%), Gaps = 41/382 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM--Y 64
L C G P Y+W+++G+ E + L + + N+ T+ ++P A Y
Sbjct: 65 LRLKCIFAGYPPPQYTWYKDGK----EPIELPNVN----VKNLGTMLEIDPVSVEAAGEY 116
Query: 65 QCRAKNQLKTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+C+ N+ + Q V + ++P+F +P +T G+V C P P+ W
Sbjct: 117 RCQVTNEQTRVTGNMQYTVRVHVRPTFVDKP--QDTTVPVNGSVIFTCTATGDPAPQIRW 174
Query: 124 KKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G + G RK + + + ++ D+ + C A+N G D L V+ P
Sbjct: 175 TVNGQDPSTYLDGVRKTLQGNVMHLYNLTVKDTAVIQCNASNAFGYDFVNAYLNVMREPP 234
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
Y+ + PP+ ++ T WT +G I L T G
Sbjct: 235 YFIK-PPQAEQRVVDGHEVTIYCQTFSAPKALISWTKDGRPISGGRYRSLIT-------G 286
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGVQVVE--VHKTSAT 296
L+I++ + D+G YEC + G ++V + P QV E V K T
Sbjct: 287 DLKISSVAITDSGVYECTATNPFGSRKASGRLLVRRRTSIVLAPIDTQVYEDQVVKFVCT 346
Query: 297 IQWTDGATNGRPITHYKIIARTNWNST------WFNVSEHVIGKEVDRYTGRKEASIENV 350
+ + IT YK N T WF+ S + G + R TG+ + N
Sbjct: 347 AETDPMELHNLEITWYKDDNLIEPNLTPRIQQIWFDYSLVLSGAQ-PRDTGQYRCNASNG 405
Query: 351 LVPWSTYEFKVIAGNELGYGEP 372
L ++ V + + L G P
Sbjct: 406 L------DYAVASASLLVQGRP 421
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++T C+ F P SW ++G ++ I +T D +Y+
Sbjct: 251 EVTIYCQTFSAPKALISWTKDGRPISGGRYRSLITGDLKISSVAIT--------DSGVYE 302
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP----KF 121
C A N +R +S +L V + S P++++ Y E V C E P +
Sbjct: 303 CTATNPFGSRKASGRLLV-RRRTSIVLAPIDTQVY--EDQVVKFVCTAETDPMELHNLEI 359
Query: 122 VWKKDGNIIG---SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 168
W KD N+I + ++I+ + +L++S D+G Y C A+N G+D
Sbjct: 360 TWYKDDNLIEPNLTPRIQQIWFDYSLVLSGAQPRDTGQYRCNASN--GLD 407
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 58 ERDPAMYQCRAKNQL---KTRYSSAQLRVLTLKPSFKKRPLES--ETYAGEGGNVT-IFC 111
E +Y C A N++ +T S L+V + ++ +PL + T G++ + C
Sbjct: 10 EDHDTLYTCVANNEVIRYQTNGPSYLLKVFGTQTNYPVKPLYNTPRTEVVTAGDILRLKC 69
Query: 112 NPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATN----VHG 166
P P++ W KDG + G +L I PVS + +G Y C TN V G
Sbjct: 70 IFAGYPPPQYTWYKDGKEPIELPNVNVKNLGTMLEIDPVSVEAAGEYRCQVTNEQTRVTG 129
Query: 167 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
+ R+ V P++ ++ P T+ + ++ C+A + + WT NG
Sbjct: 130 NMQYTVRVHV--RPTFVDK-PQDTTVPVNGSVIFTCTATGDPAPQIR--WTVNGQDPSTY 184
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVIVEGPPGL--P 282
L+ + G ++ + N + D +C + G ++ V+ E P + P
Sbjct: 185 ----LDGVRKTLQGNVMHLYNLTVKDTAVIQCNASNAFGYDFVNAYLNVMREPPYFIKPP 240
Query: 283 GGVQ-VVEVHKTS----------ATIQWTDGATNGRPIT 310
Q VV+ H+ + A I WT +GRPI+
Sbjct: 241 QAEQRVVDGHEVTIYCQTFSAPKALISWTK---DGRPIS 276
>gi|326666180|ref|XP_003198206.1| PREDICTED: protein sidekick-2-like, partial [Danio rerio]
Length = 2116
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 206/483 (42%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP W+++ ++ P++ + L I L P+ D M+QC A+N
Sbjct: 255 CQARGVPQPDIVWYKDAVPIS----PVKTPRYRVLVGGSLQINGLLPD-DTGMFQCFARN 309
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
++ L V ++ P+ P S++ +G ++ + C AP+P W+K ++
Sbjct: 310 LAGEIQTNTYLAVTSIAPNITAGP--SDSAVIDGMSIILHCETSGAPRPAITWQKAERVL 367
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C A+N G+DE+ L+V +
Sbjct: 368 ASGSVQLPRFTLLESGSLLISPSHLLDAGSYTCMASNSRGIDEASADLVVW-ARTRITNP 426
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEI 245
P ++ + C + + V +IW G I + +P + +D G L I
Sbjct: 427 PQDQSVIKGTKAAMTCGVTHDPSVTVRHIWEKGGAVI-----DVKSSPRLRLDSNGTLHI 481
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGA 303
+ D G Y C V S G + + V P P + + + + + W
Sbjct: 482 SQTWSGDIGTYTCRVTSVGGNDTRNAHLRVRQLPHAPENLIATLSISERRTINLTWAQAF 541
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W + ++ + + G L+P +Y+F++ A
Sbjct: 542 DGNSPLIRYILEVSEN-NAPWTVLLANIEPESISVIVGG--------LIPARSYQFRLCA 592
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN P Y
Sbjct: 593 VNDVGKGQFSRETARVSLPEEPPSAPPQTVIASGRTNQSIMIQWQPPPESHQNGPLQGYI 652
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + D + ++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 653 IRYCLSGLPVDCQMKNITNPDQTNLLLEDLII-----WTNYEIEVAAYNGAGQGVYSPKV 707
Query: 481 TIW 483
T W
Sbjct: 708 TEW 710
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 105/282 (37%), Gaps = 23/282 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE 58
M ++T C A P + S W +NG L+N L D R L
Sbjct: 152 MVGTFEVTLECVANARPLIKLSITWRKNGVLVNRG---LRDFGRRLTISGPLV------- 201
Query: 59 RDPAMYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA 115
D YQC A + + + A L VL P F K P T E V I C
Sbjct: 202 SDSGYYQCEASLRSSSAPSVSAGAYLHVLE-HPQFVKEPDRHITAEMEK-VVDIPCQARG 259
Query: 116 APKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
P+P VW KD I R ++ G+L I+ + DD+G++ C A N+ G ++
Sbjct: 260 VPQPDIVWYKDAVPISPVKTPRYRVLVGGSLQINGLLPDDTGMFQCFARNLAGEIQTNTY 319
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L V P + ++ L C + + + G++ L
Sbjct: 320 LAVTSIAPNITAGPSDSAVIDGMSIILHCETSGAPRPAITWQKAERVLASGSVQLPRFTL 379
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L I+ + DAG Y C+ ++ G ++V
Sbjct: 380 ----LESGSLLISPSHLLDAGSYTCMASNSRGIDEASADLVV 417
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 26/250 (10%)
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSAT 296
GL +T + AG + G++S+ T I G PP +PG + + + S T
Sbjct: 882 GLTALTTYTIQVAG----MTNKGQGQLSSST--ISSGVPPEMPGPPTNIAISNISPRSVT 935
Query: 297 IQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
+Q+ G I+ + I A+ N W V H + E D + + L P
Sbjct: 936 LQFKPGYDGKTSISRWLIEAQIGVIGENEEWVMV--HQLSNEPDARSLEVQG-----LNP 988
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ Y F++ N +G PS PS + T P AP+ I L + W PLP
Sbjct: 989 YTYYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANITLRTASETSLWLRWVPLPEW 1048
Query: 414 KQNA-PNI--YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ N P + Y + R + F S + + + + +TEYEVKVQA N
Sbjct: 1049 EYNGNPELVGYRVQYSRLGSKVGFLSHIIPDRQEREFTIEDLEE---WTEYEVKVQAFNG 1105
Query: 471 VGPGPESEVV 480
+GPGP S+ V
Sbjct: 1106 IGPGPWSQPV 1115
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
EV S + W G+ PI +Y I R +S W V + E Y +
Sbjct: 1337 EVQARSVLLSWEPGSDGLSPIRYYTIQYRELPDSNW-TVHSASVNHEATSY-------VI 1388
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L P+++Y+F+V A N++G E S S T D P +AP+ + + + W+
Sbjct: 1389 DRLKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDKAPTILSVTPHTTTSVLVRWK 1448
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GN----VGIAVVRIPSEFYYTE 460
P P E+ N + +++ +R+ +S T++ GN VR SE T+
Sbjct: 1449 PPPEEEINGILLGFRVRYRELRYDRLRSFTVRTVNSPAGNWAELTAPYSVRNLSESSLTQ 1508
Query: 461 -----------YEVKVQAINDVGPGPES 477
YE+++ N VG GP S
Sbjct: 1509 YELDNLNKHKRYEIRLSVYNAVGEGPTS 1536
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G SSP + A P AP + L ++W+P P E QN
Sbjct: 1520 YEIRLSVYNAVGEGPTSSPQEVFVGEA-VPTAAPQNVAIQSSTATQLDVTWDPPPVEAQN 1578
Query: 417 APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI++ + +N+TE ++ L E V++ + YT Y + V A N G
Sbjct: 1579 GDIQGYKIYYWEFQLQNETERLRTLFLPELS------VKLKNLTGYTTYMISVSAFNAAG 1632
Query: 473 PGPES 477
GP S
Sbjct: 1633 DGPRS 1637
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 18/212 (8%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV +S + W A I Y+I R N +S+ + + V+ +
Sbjct: 1226 PGPPVGILFPEVRTSSVRLIWQPPAQPNGIILAYQIAFRRN-SSSITSANVDVLNPSARQ 1284
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + +P Q SR +
Sbjct: 1285 YTATG-------LKPESVYVFRLTAQTRKGWGEAAEALVVTTEKRARP-QPTSRPVVPQE 1336
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I +R+ D+ + + V+ F
Sbjct: 1337 EVQARSVLLSWE--PGSDGLSPIRYYTIQYRELPDSNWTVHSASVNHEATSYVIDRLKPF 1394
Query: 457 YYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
T Y+ +V+A ND+G ESE +T D
Sbjct: 1395 --TSYQFRVKATNDIGDSEYSEESEAITTLQD 1424
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + ++ T+ W++G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1758 ISRYGSALTLHWSNGDPGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTLNLDTLR 1816
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPS 373
E V TY+F+VIA N+ GYG PS
Sbjct: 1817 EGV-----TYDFRVIAVNDYGYGSPS 1837
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 27/210 (12%)
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESE-TYAGEGGNVTIFCNPE--AAPKP 119
Y+C +N R + R L+ ++ + +E+E + G + P+ + P+P
Sbjct: 13 FYRCIVRN----RVGALMQRSSQLQVAYMEGFVEAERSQVVSQGEAALIQPPKIHSFPRP 68
Query: 120 KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH- 178
W +DG I R I + L+I D+G Y A N + + ++L
Sbjct: 69 GITWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPVILTV 128
Query: 179 ----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
GP+ I + + L C A+ L+ ++ W NGV + N L
Sbjct: 129 ENVGGPADPIAPSIIIPPKNTSVMVGTFEVTLECVANARPLIKLSITWRKNGVLV-NRGL 187
Query: 229 NELETPNINIDGGLLEITNASFADAGEYEC 258
+ G L I+ +D+G Y+C
Sbjct: 188 RDF--------GRRLTISGPLVSDSGYYQC 209
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRP-ITHYKIIARTNWNSTWFNVSE 329
++ PP + P + + +TS ++W + NG P + Y++ + F
Sbjct: 1017 LQAPPDIAPANITLRTASETSLWLRWVPLPEWEYNGNPELVGYRVQYSRLGSKVGF--LS 1074
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
H+I +R E +IE+ L W+ YE KV A N +G G S P T P
Sbjct: 1075 HIIPDRQER-----EFTIED-LEEWTEYEVKVQAFNGIGPGPWSQPV-HGRTRESVPSSG 1127
Query: 390 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 449
P+ + + + W +P +N + YK+ +++K D E GN +
Sbjct: 1128 PANVSAFATTSSSILVRWGDVPETDRNGLILGYKVVYKEK-DAESVLHFWTVEGNTTYS- 1185
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPG 474
V++ Y YE++V + +G G
Sbjct: 1186 VQLTGLGKYVLYEIQVLSFTRIGDG 1210
>gi|353229965|emb|CCD76136.1| septate junction protein [Schistosoma mansoni]
Length = 1354
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 217/501 (43%), Gaps = 49/501 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T+ C A G P W NGE +S D R + N + + L +D A+ QC
Sbjct: 242 VTFRCTASGDPPPKIRWTINGEDPSSYL----DGVRKVLHGNTMQLSNLT-IKDSAVIQC 296
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N+ +++A + V+ P F K P ES A +G VT+FC +APK W KD
Sbjct: 297 NASNKFGYAFTNAYVNVMREAPYFMKPP-ESVVRAVDGNQVTLFCQTFSAPKAIISWTKD 355
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
I +GGR KI +G+L I V+ DSG+Y CTATN G ++ G+L+V +
Sbjct: 356 RRPI-NGGRYKILTSGDLFIESVAITDSGVYECTATNPFGSKKASGKLLVRRK-TRIVLA 413
Query: 187 PPKITIAAHRNLQLRCSAHTE--ELLDVAYIWTHNGVRIGNMDLNELETPNIN---IDGG 241
P + + ++ C+A T+ E+ ++ W + I D N TP I D
Sbjct: 414 PINTRVYENDVVKFVCTAETDPAEVSNLKITWYKDDNYI---DPN--LTPRIQQVWFDYA 468
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV---HKTSATIQ 298
L+ ++ A D G+Y C + + + ++V+G P VQV V ++ A I
Sbjct: 469 LV-LSGAQPRDTGQYRCNASNGLDFDTATAPLLVQGRPEQAINVQVNCVDFINEELALIT 527
Query: 299 WTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGR-KEASIENVLVPWST 356
W G+ N PI Y + T + TW+ E+ TG + S++ VL P
Sbjct: 528 WYPGSDNYAPIMEYIVEYSTQFERDTWY-------PAEIFNLTGLVQSTSVKVVLRPNIQ 580
Query: 357 YEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
Y+F+V N +G PS P+ + P P P + G +L I W LP +
Sbjct: 581 YQFRVRTRNRVGVSLPSQPTTKTCGIPGRVPSVNPRELYVFGTIGNNLVIRWTTLPFIEH 640
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEY--------------GNVGIAVVRIPSEFYYTEY 461
N N+ Y + + N QS + G+ V I S Y +
Sbjct: 641 NGNNLGYILTVQCLNCASVQSNAINTTVIGDWRTDRIVYTSFKAGVVVSEIES---YKLF 697
Query: 462 EVKVQAINDVGPGPESEVVTI 482
V +Q+ N+ G +S V +
Sbjct: 698 RVTIQSRNEKGVSTQSPTVAL 718
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 25/272 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE--RDPAMYQCRA 68
C G P+ Y+WF++ SE + L + N+ T+ +NP Y+C+
Sbjct: 153 CIYSGYPEPQYTWFKD----ESEKITLPNVK----IKNMGTMLEINPVTIESAGEYRCQG 204
Query: 69 KNQLKTRYSSAQLRVLT-LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N++ ++Q V ++P F ++P + G+VT C P PK W +G
Sbjct: 205 INEVTKNTVNSQFTVFVRVRPKFIEKP--EDITVPVNGSVTFRCTASGDPPPKIRWTING 262
Query: 128 NIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
S G RK+ + +S ++ DS + C A+N G + + V+ Y+ +
Sbjct: 263 EDPSSYLDGVRKVLHGNTMQLSNLTIKDSAVIQCNASNKFGYAFTNAYVNVMREAPYFMK 322
Query: 186 LPPKITIAAHRN-LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
P + A N + L C + +++ + G + + G L
Sbjct: 323 PPESVVRAVDGNQVTLFCQTFSAPKAIISWTKDRRPINGGRYKI---------LTSGDLF 373
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVE 276
I + + D+G YEC + G ++V
Sbjct: 374 IESVAITDSGVYECTATNPFGSKKASGKLLVR 405
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 100/244 (40%), Gaps = 46/244 (18%)
Query: 63 MYQCRAKNQLKTRYS------SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEA 115
MYQC AKNQ T S A+L L K R A G +V + C P
Sbjct: 1 MYQCIAKNQFGTALSVIVNVKRAELGDFELTKEQKVR-------ASLGQSVRLACQVPVG 53
Query: 116 APKPKFVWKKDGNI----IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTATNVHGMDES 170
P P W+ + N + RR NG L I+ V DD +Y+C A N +
Sbjct: 54 YPPPVVTWQTEKNAQIHYLKETNRRATDINGYLYIATVIPEDDDTLYTCVANNEVLRIQK 113
Query: 171 KG---RLIVLHG-----PSYYEQLPPKITIAAHRNL-QLRC--SAHTEELLDVAYIWTHN 219
G RL V HG P + P+ AA ++ QLRC S + E Y W +
Sbjct: 114 SGPSFRLSV-HGQQSTYPVKTDYRSPRTEDAAVGDIVQLRCIYSGYPEP----QYTWFKD 168
Query: 220 GVRIGNMDLNELETPNINID--GGLLEITNASFADAGEYEC--VVKSTVGKISTKTTVIV 275
+ ++ PN+ I G +LEI + AGEY C + + T ++++ TV V
Sbjct: 169 -------ESEKITLPNVKIKNMGTMLEINPVTIESAGEYRCQGINEVTKNTVNSQFTVFV 221
Query: 276 EGPP 279
P
Sbjct: 222 RVRP 225
>gi|145652526|gb|ABP88252.1| non-neural L1CAM [Homo sapiens]
Length = 1248
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 206/482 (42%), Gaps = 44/482 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 401 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 459 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVTDATQITQG 518
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 519 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 571
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 572 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 631
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDRYTGRKEASIENVLVPWSTYE 358
+ PI Y I F E GK + + G + ++ L P+ Y
Sbjct: 632 PAEDHNAPIEKYDIE---------FEDKEMAPGKWYSLGKVPGNQTSTTLK-LSPYVHYT 681
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP
Sbjct: 682 FRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMDWNAP 741
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+ Y++ WR + E + V + + + + YE+KVQA+N G GPE +
Sbjct: 742 QVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQ 796
Query: 479 VV 480
V
Sbjct: 797 VT 798
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 117/290 (40%), Gaps = 43/290 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRATYQNHNKTLQLLKVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 364 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 417 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 472
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKIS-------TKTTVIVEGP 278
N G L I + D G Y C+ + ++ T T I +GP
Sbjct: 473 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVTDATQITQGP 519
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 113/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 47 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 102
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 103 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 161
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 162 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 221
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 222 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 275
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + N N LL++ D GEY C+ ++++G V VE
Sbjct: 276 -----GPMPADRATYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 327
Query: 279 P 279
P
Sbjct: 328 P 328
>gi|328699654|ref|XP_001952435.2| PREDICTED: protein sidekick-like isoform 1 [Acyrthosiphon pisum]
Length = 2158
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 169/420 (40%), Gaps = 20/420 (4%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRA 68
+C+ GVP +W+RN E ++ +RY ++ D L I+ LN E D M+QC A
Sbjct: 354 SCDTIGVPQPKITWYRNAETIS-------QNNRYIVEEDGTLVIKKLNIE-DSGMFQCEA 405
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ T S L+V T P + P S EG V + C APKP W
Sbjct: 406 ENEAGTDSISTWLKVKTTGPIIENEPQNSTVL--EGNEVILSCRVIGAPKPNTTWTFGDL 463
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R +I + G+L IS D+G YSC +N G E + VL G + + P
Sbjct: 464 FVSLNERIRILDTGDLFISSTKVQDTGKYSCIRSNEAGTVEMHAYIKVL-GKTTIVEPPM 522
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG-GLLEITN 247
+ +N ++C ++ + W HN +G + I + G LEI
Sbjct: 523 DTRVLLGQNSIMKCKVSSDPSVLYQIDWFHNNKSLGAGN------SRIKVSADGTLEIGV 576
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
DAG Y C V S G + + P P Q V S + WT G
Sbjct: 577 VRAGDAGVYTCSVSSPGGNERRHAHLSILELPYPPNVAQAERVGPRSVNVSWTVGFDGNS 636
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PI Y + R + + + + + + +EN L +TY+F++ A N +
Sbjct: 637 PILKYIVQKRQIETQSLLDPLVDWVTELTNISANSRYVVLEN-LKAANTYQFRISAMNAI 695
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G G PS PS P P P G ++ W+P E N + Y I +R
Sbjct: 696 GEGTPSQPSNFVTLPQQAPSGPPLGFVGSARSNSEIITQWQPPLEEHHNGQILGYIIRYR 755
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 19/224 (8%)
Query: 255 EYECVVKSTVG----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
++E + VG +I+T + I P P + + + S +Q+T G IT
Sbjct: 990 KFEVFAWTKVGPGPSRIATIQSGIEPVLPNPPTKLAITNIEPFSVVLQFTPGFDGNSSIT 1049
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL--VPWSTYEFKVIAGNELG 368
+ + A+T N+TWF V E EA+ VL VP++ Y ++ A N +G
Sbjct: 1050 KWVVEAQTARNTTWFTVHEE----------SSPEATTLKVLQLVPYTLYRLRITAWNVVG 1099
Query: 369 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 428
EPS P+ + T P P + +L + W PL + + Y I +R
Sbjct: 1100 ASEPSDPTKDFQTIQAPPAHPPYNVTVRAMSSTELRVRWIPLQQSEWFGNGKGYNITYRL 1159
Query: 429 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
N + + T+++ + + + +T+Y+V + A NDVG
Sbjct: 1160 LNTSVVYTVTIEDITSNSFVLDSLQK---FTQYDVTMNAFNDVG 1200
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 80/201 (39%), Gaps = 10/201 (4%)
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 137
SA + L+P L ET G V I C+ P+PK W ++ I R
Sbjct: 322 SADADIFVLEPPTFVGNLRMETLGEYGSTVRISCDTIGVPQPKITWYRNAETISQNNRYI 381
Query: 138 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 197
+ E+G L+I ++ +DSG++ C A N G D L V E P T+
Sbjct: 382 VEEDGTLVIKKLNIEDSGMFQCEAENEAGTDSISTWLKVKTTGPIIENEPQNSTVLEGNE 441
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEY 256
+ L C + WT + + LNE I I D G L I++ D G+Y
Sbjct: 442 VILSCRVIGAPKPNTT--WTFGDLFVS---LNE----RIRILDTGDLFISSTKVQDTGKY 492
Query: 257 ECVVKSTVGKISTKTTVIVEG 277
C+ + G + + V G
Sbjct: 493 SCIRSNEAGTVEMHAYIKVLG 513
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 118/305 (38%), Gaps = 33/305 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP-AMYQCRAK 69
C+A G P Y W+++G+ L + R LN + D YQC AK
Sbjct: 64 CQALGFPAPVYKWYKDGKELGD------------FSSEYQSFRLLNLKHDDGGTYQCIAK 111
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNP-EAAPKPKFVW-KKD 126
N++ + S + +F + + E G I C P ++ P P W D
Sbjct: 112 NEVGSILSQKIEINIAYMENFME--VTDPIVRVERGQAAILDCPPIKSYPPPMVQWLTDD 169
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN-VHGMDESKGRL-IVLHGPSYYE 184
G + + E L++ S D Y ATN + G DE L I G S
Sbjct: 170 GTQLYDIKYASVAETHQLVVLSASDSDQKAYRVRATNPLLGKDEFSQYLRINTIGGSQSG 229
Query: 185 QLPP--------KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
++ P K I H+ +L+C A+ L ++ +W + + I N N ++
Sbjct: 230 EIAPYFVVKPKGKHIIKGHKTTELQCIANARPLHELGTLWFKDDIPIENT--NGVDYIYN 287
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVG---KISTKTTVIVEGPPGLPGGVQVVEVHKT 293
+ L + NA G Y C ++ G IS + V PP G +++ + +
Sbjct: 288 DPWNRTLSLINAKLTYTGRYTCQIRFVSGGYAPISADADIFVLEPPTFVGNLRMETLGEY 347
Query: 294 SATIQ 298
+T++
Sbjct: 348 GSTVR 352
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 108/512 (21%), Positives = 183/512 (35%), Gaps = 84/512 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNS--ETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
++ +C G P +W G+L S E + + D FI + +D
Sbjct: 441 EVILSCRVIGAPKPNTTW-TFGDLFVSLNERIRILDTGDLFISSTKV--------QDTGK 491
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV- 122
Y C N+ T A ++VL K + + P+++ G+ N + C + P +
Sbjct: 492 YSCIRSNEAGTVEMHAYIKVLG-KTTIVEPPMDTRVLLGQ--NSIMKCKVSSDPSVLYQI 548
Query: 123 -WKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W + +G+G R K+ +G L I V D+G+Y+C+ ++ G + L +L P
Sbjct: 549 DWFHNNKSLGAGNSRIKVSADGTLEIGVVRAGDAGVYTCSVSSPGGNERRHAHLSILELP 608
Query: 181 SYYEQLPPKITIAAH---------------------RNLQLRCSAHTEELLDVAYIWTHN 219
PP + A + + + T+ LLD W
Sbjct: 609 -----YPPNVAQAERVGPRSVNVSWTVGFDGNSPILKYIVQKRQIETQSLLDPLVDWV-- 661
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVI 274
E NI+ + + + N A+ ++ + +G + S T+
Sbjct: 662 -----------TELTNISANSRYVVLENLKAANTYQFRISAMNAIGEGTPSQPSNFVTLP 710
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTN--WNSTWFNVSE 329
+ P G P G + QW + NG+ I Y I R + +NS W ++
Sbjct: 711 QQAPSGPPLGFVGSARSNSEIITQWQPPLEEHHNGQ-ILGYIIRYRLHGYFNSPW---TD 766
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
H I Y ++ L+ W Y +V + N G G S S + T P A
Sbjct: 767 HNITSGAQHYYLIQD------LITWKDYVLQVASYNNKGVGV-YSDSIRIKTKEGVPEAA 819
Query: 390 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FW---RKKNDTEFQSETLKEYGNV 445
P + + + W+P +K N N YK+ W R +++
Sbjct: 820 PIDVIARPINSTSVQVWWKPPDPQKINGINQGYKLQAWIGERVEHEMTVAPSLFDPLAQQ 879
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
V + +T Y V V D G GP S
Sbjct: 880 TTTFVNLRK---FTAYNVTVLCFTDPGDGPIS 908
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 15/211 (7%)
Query: 279 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 336
P P Q+ ++ T T WT G P+ +Y + ++ W + E I +
Sbjct: 1418 PQAPSSPQISRSQIQATQITFSWTPGRDGYAPLRYYTV-QKSEEIGPWTTIPER-IDPSI 1475
Query: 337 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 396
YT + L+P++ Y F++ A N++G S SPQ T P + ++
Sbjct: 1476 TSYTIQD-------LLPFTLYRFRIQATNDIGPSTYSHESPQVRTLPTSPSRVVGKVQVV 1528
Query: 397 GGKIGDLSISWEPLPREKQNAPNIY--YKIFWRKKNDTEFQSETLKEYGNVGIA--VVRI 452
+ ++WEP+P + N YK+ ++ +D +T+ +G + I
Sbjct: 1529 PITTTSVRVTWEPIPPQYWNGDTQTGGYKVLYQPVSDIPMALQTIPSQMIIGTTEKTLVI 1588
Query: 453 PSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
Y++ V N G GP S + ++
Sbjct: 1589 GDLVRDRNYDIIVVPFNSQGNGPPSMPIPVY 1619
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 95/244 (38%), Gaps = 46/244 (18%)
Query: 262 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---------DGATNG-----R 307
ST S + + P + G VQVV + TS + W D T G +
Sbjct: 1502 STYSHESPQVRTLPTSPSRVVGKVQVVPITTTSVRVTWEPIPPQYWNGDTQTGGYKVLYQ 1561
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
P++ + +T S+ +IG T K I + LV Y+ V+ N
Sbjct: 1562 PVSDIPMALQTI-------PSQMIIG------TTEKTLVIGD-LVRDRNYDIIVVPFNSQ 1607
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW- 426
G G PS P P Y A P P + ++ +SWE + +QN + YKIF+
Sbjct: 1608 GNGPPSMPIPVYVGEA-VPTGEPRSVSAFAISSTEVRLSWEHPQQNQQNGDLLGYKIFYI 1666
Query: 427 --------RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
R + +TE T + V + YTEY++++ A N G GP S
Sbjct: 1667 VTDSPNEHRVEEETEVVPATYISHSLVFLD--------KYTEYKIQILAFNPAGDGPRSA 1718
Query: 479 VVTI 482
+ +
Sbjct: 1719 PIIV 1722
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 15/212 (7%)
Query: 265 GKISTKTTVI--VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 322
G +ST T + E PG P V +V T+A I W A I Y+I + + +S
Sbjct: 1304 GVLSTPITRVQTFEDVPGTPSNVSFPDVTSTTARIIWDVPADPNGEILAYRINYQLH-SS 1362
Query: 323 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382
+N S+ + R +I+ L+P Y F V A LG+G+ S +
Sbjct: 1363 EGYNFSKEFPASD------RTFRAID--LIPDQYYMFWVTAQTRLGWGKSQSALVFSSNN 1414
Query: 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 442
+ P QAPS +I I++ P AP YY + +K++ T+ E
Sbjct: 1415 REIP-QAPSSPQISRSQIQATQITFSWTPGRDGYAPLRYYTV---QKSEEIGPWTTIPER 1470
Query: 443 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
+ I I +T Y ++QA ND+GP
Sbjct: 1471 IDPSITSYTIQDLLPFTLYRFRIQATNDIGPS 1502
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 274 IVEGP-PGLPGGVQVVEVHKT--SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 330
+ GP PG P + + KT S ++WT+GA+ PI Y I +R ++ W V++
Sbjct: 1818 VTTGPQPGSPKSPSDLSLVKTVSSVALKWTNGASGKGPILGYYIQSRRKDDTRWATVTKS 1877
Query: 331 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373
G +D ++ ++ L+P ++Y F+++A NE G P+
Sbjct: 1878 NSGP-LDEFSVSYQS-----LLPSTSYLFRIVAHNEFGISYPA 1914
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147
P F +P ++ GEG I C P P + W KDG +G +++ LL
Sbjct: 41 PRFITQPTSTKNVIGEGQTKIIQCQALGFPAPVYKWYKDGKELGDFSSE--YQSFRLL-- 96
Query: 148 PVSRDDSGIYSCTATN-VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC 202
+ DD G Y C A N V + K + + + ++ E P + + + L C
Sbjct: 97 NLKHDDGGTYQCIAKNEVGSILSQKIEINIAYMENFMEVTDPIVRVERGQAAILDC 152
>gi|322787037|gb|EFZ13261.1| hypothetical protein SINV_11265 [Solenopsis invicta]
Length = 1358
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 215/503 (42%), Gaps = 41/503 (8%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++A +T + + +P + SW ++GE L S +L +E++ F ++L + L+ R
Sbjct: 212 SRAQVTCSVTSGDLP-IYISWLKDGEPLPS-SLRIEERGAEFF--SILVFKELS-SRHSG 266
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N +A+L V + P + PL+ T G NV C + P P+
Sbjct: 267 KYTCVATNSAAKVNHTAELLV-KVPPQWIFEPLDVATLLGNPLNV--HCEAKGFPPPRIT 323
Query: 123 WKKDGN---------IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W + + GS GR I NG+L + D G Y C A N G SK
Sbjct: 324 WLRARGRTSNDYQPLVDGSDGRLTILPNGSLWTASAGPQDEGYYLCRANNAIGSGLSKVI 383
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ +H P+ +E +TI ++ + C+ + ++V W HN R+ +M + L
Sbjct: 384 YVSVHEPARFEFQSKNVTIRRGESVTIDCTVIGDNPIEVQ--WMHNSDRL-DMSNHRLSI 440
Query: 234 PNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I D GL L I N+ D+G Y C + G+ + V+ P P G++V+E+
Sbjct: 441 GQIKTDNGLKSQLSIANSDRQDSGVYRCTADNAYGRSEHLIYLAVQERPDPPAGLEVIEI 500
Query: 291 HKTSATIQWTDGATNGRPITHYKIIART---NWNSTWFNVSEHVI---------GKEVDR 338
S + W PI +Y I R+ W V H + G
Sbjct: 501 GSRSIRLLWKRAFDGNSPIRNYVIQYRSLSHGMTDDWNPVKTHNVTYTPGSSNSGLSPFE 560
Query: 339 YTG-RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
TG +E ++ L P TY F++ A N + P+ + T + P + P I
Sbjct: 561 TTGDDQEVALVGGLHPAVTYTFRIFAINSIDASGPTE-AVVAKTQEEAPTEPPQSIKVQS 619
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---QSETLKEYGNVGIAVVRIPS 454
G+L +SW+ P+E N + Y + W + + + QS++L G V++
Sbjct: 620 AGPGELMVSWQSPPKESCNGDLLGYIVTWSEHSSSTSGVNQSKSLTVNG-WATTKVQLTG 678
Query: 455 EFYYTEYEVKVQAINDVGPGPES 477
+T+Y++ ++A N + GP S
Sbjct: 679 LRKFTKYDISIRAFNSIASGPAS 701
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 15/273 (5%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T C G P + W +G L +D + VL I + RD MYQC
Sbjct: 33 TMNCTVEGYPVESVEWLHDG----VPVLTAQDTRIRLLAPLVLVIGSVG-RRDKGMYQCL 87
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
++ + ++A+L+ L P + A G ++TI C P W + G
Sbjct: 88 VRSDKENAQATAELK-LGGPPYIRSI---GPVRAIAGVDITIACPYSGYPITSVGWTRGG 143
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ R+++ G+L I V +D+G Y+C G ++ L+ ++ P
Sbjct: 144 AELPFDIRQRVDSEGHLTILTVDPNDAGTYTCIVRASSGETANRDILLTVNSPPVMSPFN 203
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGGLLEIT 246
Q+ CS + + L + W +G + ++ + E +I L
Sbjct: 204 FPANSQEGSRAQVTCSVTSGD-LPIYISWLKDGEPLPSSLRIEERGAEFFSI----LVFK 258
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
S +G+Y CV ++ K++ ++V+ PP
Sbjct: 259 ELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 291
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 161
G T+ C E P W DG + R ++ L+I V R D G+Y C
Sbjct: 29 GETATMNCTVEGYPVESVEWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRRDKGMYQCLV 88
Query: 162 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
+ ++ L L GP Y + P IA ++ + C + V WT G
Sbjct: 89 RSDKENAQATAEL-KLGGPPYIRSIGPVRAIAG-VDITIACPYSGYPITSVG--WTRGGA 144
Query: 222 RIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVI-VEGPP 279
+ D+ + +D G L I DAG Y C+V+++ G+ + + ++ V PP
Sbjct: 145 EL-PFDIRQ------RVDSEGHLTILTVDPNDAGTYTCIVRASSGETANRDILLTVNSPP 197
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 18/205 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D+T C G P + W R G LP + + R + + LTI ++P D Y
Sbjct: 122 DITIACPYSGYPITSVGWTRGG-----AELPFDIRQRVDSEGH-LTILTVDPN-DAGTYT 174
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV-WK 124
C + + ++ + +LT+ P + EG + C+ + P ++ W
Sbjct: 175 CIVR--ASSGETANRDILLTVNSPPVMSPFNFPANSQEGSRAQVTCSVTSGDLPIYISWL 232
Query: 125 KDGNIIGSGGRRKIFENGN-----LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
KDG + S R I E G L+ +S SG Y+C ATN L+V
Sbjct: 233 KDGEPLPSSLR--IEERGAEFFSILVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVP 290
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSA 204
P + + P + L + C A
Sbjct: 291 PQWIFE-PLDVATLLGNPLNVHCEA 314
>gi|431913509|gb|ELK15184.1| Contactin-4 [Pteropus alecto]
Length = 597
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 172/377 (45%), Gaps = 40/377 (10%)
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDD-SGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG G+ R I+ G++ I + R++ S + +C G E +G L
Sbjct: 15 DGTRQGALSRGVIWRKGSMRICTLGRENPSHLATC-----WGFREERGLL---------- 59
Query: 185 QLPPKITIAAHRNLQLRCSAHTEE-LLDVAYIWT------HNGVRIGNMDLNE-----LE 232
L P+ AA L+ + L ++W H +G D++ L+
Sbjct: 60 DLTPRCPPAAAATLRTPGGCCLRDGLRRPHHVWQKRHAGEHAEASLGPADVHSGRPRVLQ 119
Query: 233 T-----PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
T P+ + D G L I N AG+Y C V+++V ++S +IV GPPG P V
Sbjct: 120 TRASNSPSAHQDSAGDLMIRNIQLKHAGKYVCTVRTSVDRLSATADLIVRGPPGPPEAVT 179
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ E+ T+A + W G N PIT Y I ART ++ W VS + + VD GR +
Sbjct: 180 IDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GRTFTA 234
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
L PW YEF+ +A N +G GEPS PS + T P AP+ + GGGG +L I+
Sbjct: 235 TVVGLNPWVEYEFRSVAANAIGVGEPSRPSEKRRTEEALPEVAPANVSGGGGSKSELVIT 294
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
WE +P E QN Y + +R + T T+ + V R S ++ +EV+V
Sbjct: 295 WETVPEELQNGRGFGYVVAFR-PHGTAVWMLTVLASADACRYVFRNESVRPFSPFEVRVG 353
Query: 467 AINDVGPGPESEVVTIW 483
N+ G GP S ++
Sbjct: 354 VYNNRGEGPFSATTVVY 370
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
RY R E+ + P+S +E +V N G G S+ + Y+ ++P + P+ I
Sbjct: 334 RYVFRNES-----VRPFSPFEVRVGVYNNRGEGPFSATTVVYSA-EEEPTKPPASISARS 387
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
D+ + W +EK Y+I + + +D E + ++ +GN +I +
Sbjct: 388 LSATDIEVFWASA-KEKNRGRVQGYEIKYWRHDDKEENARKIRTFGNQ--TSTKITNLQG 444
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
Y + V+A N G GP S V +
Sbjct: 445 SALYHLAVKAFNTAGTGPSSATVNV 469
>gi|410984299|ref|XP_003998467.1| PREDICTED: protein sidekick-1 [Felis catus]
Length = 2117
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 204/488 (41%), Gaps = 31/488 (6%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + + C A GVP T W+++ + L + + L I++L PE D
Sbjct: 305 VDVEETVDIVCRAMGVPLPTLQWYKDAVSIGK----LHNPRYKMLASGGLRIQHLRPE-D 359
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
++QC A N + L V + P+F + P++ T +G T+ C APKP
Sbjct: 360 SGIFQCFASNDGGEIQTYTYLDVTNVAPAFTQLPVD--TTVTDGMTATLRCEVSGAPKPA 417
Query: 121 FVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W++ +I+ SG R + E+G L I+PV D+G Y+C ATN G + L V
Sbjct: 418 ITWRRGKHILASGSVRIPRFMLLESGGLQITPVFIQDAGNYTCYATNTEGSLSASAALTV 477
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ S ++ I L C A + + + Y+W + I + + +
Sbjct: 478 WNRTSIVNPPEDRVVIKG-TTATLHCGATHDPRITLRYVWKKDNAIITPSGSSRIV---V 533
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTS 294
DG L+ I+ D G+Y C + S G S + V P P + + H +
Sbjct: 534 EKDGSLV-ISQTWSGDIGDYTCEILSEGGNDSRTARLEVIELPHSPQNLLASLNSSHSHT 592
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
T+ W P+ +Y I+ + NS W V +G E+ T R L P
Sbjct: 593 VTLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVGPEMTGVTVRG-------LTPA 643
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
TY+F+V A N++G G+ S+ + + P + P P I G + + W+P P +
Sbjct: 644 RTYQFRVCAVNQVGKGQYSAETSRLVLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETE 703
Query: 415 QNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
N Y + +R E Q + + + + +T+YE++V A N G
Sbjct: 704 HNGVLRGYILRYRLAGLPGEHQQRNIT---SPEVNYCLVTELIIWTQYEIQVAAYNGAGL 760
Query: 474 GPESEVVT 481
G S VT
Sbjct: 761 GVFSRAVT 768
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G+ P T Y I R + W + K
Sbjct: 1806 AEGSPGSPRDVSVSK-SASELTLQWTEGSVGRTPTTGYVIEVRPSDEGLW-----DMFAK 1859
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1860 DIPRSATSYTVSLDT-LRQGVTYEFRVVAVNQAGYGEPSSPSTAVSAQVETPF 1911
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 111/290 (38%), Gaps = 42/290 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I +++ L D Y+C
Sbjct: 29 LVLTCLAEGSWPLEFKWMHN----DSELTTYSSEYKYIIP----SLQRL----DAGFYRC 76
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ +A V F + P+P+ W
Sbjct: 77 VVRNRMGALLQRRSEVQVAYMGNFMDTDQRKTVSQGHAA----VLDFLPISSCPRPQVTW 132
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+ +Y A N D L+ V
Sbjct: 133 FREGHKIVPSSRIAITLENQLVILAATAGDARVYYAQAVNERNGDSKTSPLVHLSVAGDA 192
Query: 181 SYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I I A + L C A+ + ++ W NGVR+
Sbjct: 193 GAPETVAPVIVIPPGNRSVVAGSSEITLECVANARPVESLSVNWKRNGVRV--------- 243
Query: 233 TPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 279
T ++ G L I+N + AD G Y C + ST + K + + PP
Sbjct: 244 TSGLHGFGRRLTISNPTSADTGAYVCEATLTGSTFEPATAKAFLSIIEPP 293
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 964 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG------ 1017
Query: 326 NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
IG+E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1018 -----AIGEEEEWVSLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRV 1072
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 435
T P AP+ I L + W PLP + N ++ Y+I +WR +
Sbjct: 1073 IQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRPDLRPQAL 1132
Query: 436 SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
++ + + R+ EF +TEYE+++QA N +G GP SE V
Sbjct: 1133 AQVIND---------RLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSEAV 1174
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + R W++ ++S V+R
Sbjct: 1392 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWHTYSSSISHEATACAVER-- 1449
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + S+ + T D P + PS I
Sbjct: 1450 ----------LRPFTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSSISVTPHTT 1499
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 444
+ I W+P E N Y+I++R+ + S+TLK +
Sbjct: 1500 SSVLIQWQPPRDESLNGLLQGYRIYYRELESEASAATASKTLKTPSALRAELTAQSSFKT 1559
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1560 VNSSSTLTTYELTHLKKYRRYEVVLTAYNIIGESPASAPVEVF 1602
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 268 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 322
S++ ++ PP + P + V +TS ++W D NG P + Y+I W
Sbjct: 1069 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWRP 1125
Query: 323 TWF-NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381
VI ++R E +IE L W+ YE ++ A N +G G P S + + T
Sbjct: 1126 DLRPQALAQVINDRLER-----EFTIEG-LEEWTEYELQMQAFNAIGAG-PWSEAVRGRT 1178
Query: 382 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 440
P AP + + ++W +P + QN + YKI +R K D E +S ++
Sbjct: 1179 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKELDPEPRSHVVR 1238
Query: 441 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
GN + + + + YE++V A +G G
Sbjct: 1239 --GNHTQSAL-LTGLRKFVLYELQVLAFTRIGNG 1269
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++WEP P E QN
Sbjct: 1580 YEVVLTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWEPPPPESQN 1638
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YK+++ + D++ ++E +K + V+++ + +T Y V + A N G GP
Sbjct: 1639 GNIQGYKVYYWEA-DSQNETEKMKVL-FLPETVLKLKNLTGHTPYRVSISAFNAAGDGPR 1696
Query: 477 SE 478
S+
Sbjct: 1697 SD 1698
>gi|149036840|gb|EDL91458.1| rCG56294, isoform CRA_a [Rattus norvegicus]
Length = 644
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 11/272 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L E +R I++ LTI LN D M+QC
Sbjct: 335 LYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENGALTIANLNVS-DSGMFQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+L+VL P F + P++ G V + C P A+P+ WKK
Sbjct: 387 IAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKKG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R + +G L I V++ D+GIY+C A N G +L+V P+
Sbjct: 447 DTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTE-PTRIILA 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + +A ++ L C + LLD+ + W NG D + E + G L+ I
Sbjct: 506 PSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGSSSGDLM-I 564
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
N +G+Y C+V++ V +S+ +IV
Sbjct: 565 RNIQLKHSGKYVCMVQTGVDSVSSAAELIVRA 596
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 25/272 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P +W R S+ +P + + + VL I E D Y+C A+N
Sbjct: 249 CFALGNPVPQINWRR------SDGMPFPTKIKLRKFNGVLEIPNFQQE-DTGSYECIAEN 301
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ +L KP + + + ET + ++ C PKP + W K+G+ +
Sbjct: 302 SRGKNVARGRLTYYA-KPYWVQLLKDVETAVED--SLYWECRASGKPKPSYRWLKNGDAL 358
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK- 189
R +I ENG L I+ ++ DSG++ C A N HG+ S L VL + + P K
Sbjct: 359 VLEERIQI-ENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASAPDFSRNPMKK 417
Query: 190 ---ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
+ + + L + SA L W + G+ + E ++ DGGL +I
Sbjct: 418 MIQVQVGSLVILDCKPSASPRAL----SFW-----KKGDTVVREQARISLLNDGGL-KIM 467
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 468 NVTKADAGIYTCIAENQFGKANGTTQLVVTEP 499
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSL-----DHRYKLNGGNLIV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK R + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKSR-MRSRVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+V+ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R M
Sbjct: 217 RSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQI------NWRRSDGMPFP 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+++ N G+LEI N D G YEC+ +++ GK
Sbjct: 271 TKIKLRKFN---GVLEIPNFQQEDTGSYECIAENSRGK 305
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G +I S R
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ ++++ + +
Sbjct: 81 GGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWVFNEY---PSFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>gi|156717286|ref|NP_001096185.1| neural cell adhesion molecule L1 precursor [Xenopus (Silurana)
tropicalis]
gi|134025431|gb|AAI35443.1| l1cam protein [Xenopus (Silurana) tropicalis]
Length = 1250
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 212/482 (43%), Gaps = 37/482 (7%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF---IQDNVLTIRYLNPERDPA 62
D+ CE G P +W NG+ L+D D Y + D L + + D +
Sbjct: 351 DIILHCEVGGKPKPKVTWKINGK-------SLKDSDLYHNWKLIDGSLVLNNMQ-LNDTS 402
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+ QC A+N+ ++A + V+ L P R E + E NV++ C P P
Sbjct: 403 VVQCEARNKHGNLLANAFVYVVELPPQILTRNDE-QYIVVEKTNVSMDCRAFGTPFPTIQ 461
Query: 123 WKKD-GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W+ D + + + + + NG L I+ V+++D GIY CTA+N G L V +
Sbjct: 462 WESDLEDNLFALDQFSMHTNGTLTITGVAKEDEGIYRCTASNNQGNVSISAYLDVRNATK 521
Query: 182 YYEQLPPKITIAAHRNLQ--LRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
+ P + A + + +C + ++ D W NG I + + I
Sbjct: 522 I---ITPPMEQHARKGGKAIFQCKVEFDPKMSDKIIQWRKNGNEIKE----DADNDKYFI 574
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
+ L I+N +D G Y C + + + ++V P P +++ +TS T+
Sbjct: 575 EDYTLSISNVQESDHGMYTCAAHTELDAVELTAELVVIDLPEAPFDLELSNAQETSITLT 634
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
WT G N PI + I + E + E+ R G +++ L P+ Y+
Sbjct: 635 WTPGNDNNSPIEEFIIEYEED-------SFEPGVWHELTRVDGDM-FNVDLDLSPYVNYQ 686
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+VIA NE+G S+PS +Y TPA P + P + G G + ++ ISW+PL N P
Sbjct: 687 FRVIAVNEVGPSNGSNPSDRYETPAFAPAKNPREVKGEGTEPQNMYISWKPLKGIDWNGP 746
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y + WR+ E++ E + + V ++ I + YE+ VQ++ND+G E +
Sbjct: 747 GFKYLVKWRQLGKEEWK-EVVADSPPVLVSGTSI-----FEPYEIIVQSVNDIGRATEPK 800
Query: 479 VV 480
V
Sbjct: 801 PV 802
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 115/299 (38%), Gaps = 45/299 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPL----EDQDRYFIQDNVLTIRYLNPERDP 61
D+ CEA Y+W ++GE + P +D I N +++
Sbjct: 57 DIVLKCEAKRNAKAKYTWKKDGETFQPDNDPRVSRKKDSGTLNISGNGNSMKDFQ----- 111
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCN-PEAAP 117
Y+C A N L T S + P ++K RPL+ E EG ++ + CN P++A
Sbjct: 112 GKYRCYATNDLGTAISHEIHVITESTPKWQKELIRPLDIE----EGASLILPCNPPKSAV 167
Query: 118 KPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMDESKGRLI 175
P+ +W + I R + NGNL S V + D+ Y C A V + I
Sbjct: 168 PPRVIWMNSNLLHITQDERVSMGVNGNLYFSNVQKQDEHPDYICHAQFVGARTIVQKEAI 227
Query: 176 VL----------HGPSYYEQLPPKITIAAHRN--LQLRCSAH---TEELLDVAYIWTHNG 220
+ P T+ A R+ LQL C A T E+ + + +
Sbjct: 228 SIKVRPTNSVKFRKPEMMLPEGSMSTVLALRDQPLQLECIAEGLPTPEIEWIPLLGSTYN 287
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
RI D + L I D G+Y+C+ K+T G S TV+VE P
Sbjct: 288 ERIQFDDFKK-----------TLHIDKVQDEDDGDYQCIAKNTQGSSSHTFTVVVESAP 335
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 40/275 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W +E + +D + D V + D YQC
Sbjct: 262 LQLECIAEGLPTPEIEWIPLLGSTYNERIQFDDFKKTLHIDKV-------QDEDDGDYQC 314
Query: 67 RAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
AKN T+ SS+ + ++ P + +P E YA G ++ + C PKPK WK
Sbjct: 315 IAKN---TQGSSSHTFTVVVESAPYWINKP-EDGIYA-PGEDIILHCEVGGKPKPKVTWK 369
Query: 125 KDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G + ++ +G+L+++ + +D+ + C A N HG ++ + Y
Sbjct: 370 INGKSLKDSDLYHNWKLIDGSLVLNNMQLNDTSVVQCEARNKHGN-------LLANAFVY 422
Query: 183 YEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHN-GVRIGNMDLNELET 233
+LPP+I + N+ + C A + W + + +D + T
Sbjct: 423 VVELPPQILTRNDEQYIVVEKTNVSMDCRAFGTPFPTIQ--WESDLEDNLFALDQFSMHT 480
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268
G L IT + D G Y C + G +S
Sbjct: 481 ------NGTLTITGVAKEDEGIYRCTASNNQGNVS 509
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 24/187 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDN-VLTIRYLNPE 58
+ +++ C AFG P T W + LED D++ + N LTI + E
Sbjct: 443 KTNVSMDCRAFGTPFPTIQWESD----------LEDNLFALDQFSMHTNGTLTITGVAKE 492
Query: 59 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
D +Y+C A N SA L V + + K E +A +GG C E PK
Sbjct: 493 -DEGIYRCTASNNQGNVSISAYLDV---RNATKIITPPMEQHARKGGKAIFQCKVEFDPK 548
Query: 119 PK---FVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W+K+GN I + + E+ L IS V D G+Y+C A E
Sbjct: 549 MSDKIIQWRKNGNEIKEDADNDKYFIEDYTLSISNVQESDHGMYTCAAHTELDAVELTAE 608
Query: 174 LIVLHGP 180
L+V+ P
Sbjct: 609 LVVIDLP 615
>gi|344239440|gb|EGV95543.1| Contactin-5 [Cricetulus griseus]
Length = 577
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 158/356 (44%), Gaps = 15/356 (4%)
Query: 135 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 194
R I +G+L I S+ D G Y C N+ G E L V P+ E P + +
Sbjct: 12 RIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-PTRIELTPKRTELTV 70
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADA 253
++ L C A + LDV + WT G I + E+ L I N A
Sbjct: 71 GESIVLNCKAIHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHA 130
Query: 254 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 313
G Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W+ N PI+ Y
Sbjct: 131 GRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWSPATDNHSPISSYN 190
Query: 314 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373
+ AR+ ++ W ++ + TG E+++ L PW YEF+V+A N +G G+PS
Sbjct: 191 LQARSPFSLGW-----QIVKTVPEVITGDMESAMAVDLNPWVEYEFRVVASNPIGTGDPS 245
Query: 374 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW-------EPLPREKQNAPNIYYKIFW 426
PS T + Q + +L I + EP+ E QN Y + +
Sbjct: 246 IPSRMIRTNEAELRQNSQVCATLQNEPYNLQIPFSNRKNEDEPVSEEFQNGEGFGYIVAF 305
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
R N T E + + R S T +EVKV N+ G GP S++V I
Sbjct: 306 R-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVI 360
>gi|332030132|gb|EGI69926.1| Down syndrome cell adhesion molecule-like protein [Acromyrmex
echinatior]
Length = 1643
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 217/512 (42%), Gaps = 50/512 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++A +T + + +P + SW ++GE L S +L +E++ F ++L + L+ R
Sbjct: 295 SRAQVTCSVTSGDLP-IYISWLKDGEPLPS-SLRIEERGAEFF--SLLVFKELS-SRHSG 349
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N +A+L ++ + P + PL+ T G NV C + P P+
Sbjct: 350 KYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPLDVATLLGNPLNV--HCEAKGFPPPRIT 406
Query: 123 WKKDGN---------IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W + + GS GR I NG+L + D G Y C A N G SK
Sbjct: 407 WLRARGRTSNDYQPLVDGSDGRLTILPNGSLWTASAGPQDEGYYLCRANNGIGSGLSKVI 466
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ +H P+ +E +TI ++ + C+ + ++V W HN R+ +M + L
Sbjct: 467 YVSVHEPARFEFQSKNVTIRRGESVTIDCTVIGDNPIEVQ--WMHNSDRL-DMSNHRLSI 523
Query: 234 PNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I D GL L + N+ D+G Y C + G+ + V+ P P G++V+E+
Sbjct: 524 GQIKTDNGLKSQLSVANSDRQDSGVYRCTADNAYGRSEHLIYLAVQERPDPPAGLEVIEI 583
Query: 291 HKTSATIQWTDGATNGRPITHYKIIART---NWNSTWFNVSEHVI--------------- 332
S + W PI +Y I R+ W V H +
Sbjct: 584 GSRSIRLLWKRAFDGNSPIRNYVIQYRSLSHGMTDDWNPVKTHNVTYTPGSSSSGNSIHP 643
Query: 333 ---GKEVDRYTG-RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
G TG +E ++ L P TY F++ A N + P+ P T + P +
Sbjct: 644 TQNGLSPFETTGDDQEVALVGGLHPAVTYTFRIFAINSIDASGPTEPV-VAKTQEEAPTE 702
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---QSETLKEYGNV 445
P I G+L +SW+P P+E N + Y + W + + + QS++L G
Sbjct: 703 PPQNIKVQSAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSSTSGVNQSKSLTVNG-W 761
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
V++ +T+Y++ ++A N + GP S
Sbjct: 762 ATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 793
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 45/296 (15%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C G P + W +G L +D + VL I + RD MYQC ++
Sbjct: 3 CTVEGYPVESVEWLHDG----VPVLTAQDTRIRLLAPLVLVIGSVG-RRDKGMYQCLVRS 57
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN-- 128
+ ++A+L++ P + +E G V++ C+ +P P F W DG
Sbjct: 58 DKENAQATAELKLGDTVPELQYTFIEQALRPGP--PVSLRCSATGSPTPSFTWLLDGEPL 115
Query: 129 --------------IIGSGGRRK-----IFENGNLL----ISPVSRDDSGIYSCTATNVH 165
+I + RR + ++G+++ IS +D G+Y+C A+N
Sbjct: 116 SQIATGHSVISLYLLIRNYARRYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVASNTL 175
Query: 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
E K RL + +GP Y + P IA ++ + C + V WT G +
Sbjct: 176 ATVEHKARLNI-YGPPYIRSIGPVRAIAG-VDITIACPYSGYPITSVG--WTRGGAEL-P 230
Query: 226 MDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVI-VEGPP 279
D+ + +D G L I DAG Y C+V+++ G+ + + ++ V PP
Sbjct: 231 FDIRQ------RVDSEGHLTILTVDPNDAGTYTCIVRASSGETANRDILLTVNSPP 280
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 113/288 (39%), Gaps = 28/288 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLN---------SETLPLEDQDR-----YFIQDNVLTIRYLN 56
C A G P +++W +GE L+ S L + + R ++ + I +LN
Sbjct: 96 CSATGSPTPSFTWLLDGEPLSQIATGHSVISLYLLIRNYARRYAIGQYVDQSGDVISHLN 155
Query: 57 PE----RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN 112
D +Y C A N L T A+L + P + + AG ++TI C
Sbjct: 156 ISSAGAEDGGLYACVASNTLATVEHKARLNIY--GPPYIRSIGPVRAIAGV--DITIACP 211
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
P W + G + R+++ G+L I V +D+G Y+C G ++
Sbjct: 212 YSGYPITSVGWTRGGAELPFDIRQRVDSEGHLTILTVDPNDAGTYTCIVRASSGETANRD 271
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNEL 231
L+ ++ P Q+ CS + + L + W +G + ++ + E
Sbjct: 272 ILLTVNSPPVMSPFSFPANSQEGSRAQVTCSVTSGD-LPIYISWLKDGEPLPSSLRIEER 330
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ LL S +G+Y CV ++ K++ ++V+ PP
Sbjct: 331 GAEFFS----LLVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 374
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 106 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 165
+VT+ C P P+ +W N I +G ++ +G+L I + + +G Y+C+A+N+
Sbjct: 1027 SVTLSCLVVGNPTPRPIWTYRNNQISTGRHYELTSDGHLNIRGLEQSVAGNYTCSASNLF 1086
Query: 166 GMDESKGRLIVLHGP 180
G D L+V+ P
Sbjct: 1087 GDDSITYSLVVVMPP 1101
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 26/209 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D+T C G P + W R G LP + + R + + LTI ++P D Y
Sbjct: 205 DITIACPYSGYPITSVGWTRGG-----AELPFDIRQRVDSEGH-LTILTVDPN-DAGTYT 257
Query: 66 CRAKNQLKTRYSSAQLR----VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
C R SS + +LT+ P + EG + C+ + P +
Sbjct: 258 C------IVRASSGETANRDILLTVNSPPVMSPFSFPANSQEGSRAQVTCSVTSGDLPIY 311
Query: 122 V-WKKDGNIIGSGGRRKIFENGN-----LLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
+ W KDG + S R I E G L+ +S SG Y+C ATN L+
Sbjct: 312 ISWLKDGEPLPSSLR--IEERGAEFFSLLVFKELSSRHSGKYTCVATNSAAKVNHTAELL 369
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
V P + + P + L + C A
Sbjct: 370 VKVPPQWIFE-PLDVATLLGNPLNVHCEA 397
>gi|348575283|ref|XP_003473419.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Cavia porcellus]
Length = 1152
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 212/509 (41%), Gaps = 69/509 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV----LTIRYLNPERDPAMYQC 66
CEA GVP T W NG P ++ F D V ++ L+P A+YQC
Sbjct: 368 CEADGVPQPTIQWKING-------FPADNH--LFAGDVVFPREISFTNLHPNHT-AVYQC 417
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNPEAAPKPKFVWKK 125
A N T ++A + V+ + P + + + E YA G + + C A+P+ W++
Sbjct: 418 EASNVHGTILANANIDVIDVIPLIQTK--DEENYATVIGHSAFLHCEYFASPEAVVTWQR 475
Query: 126 -DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
D GGR +I NG L I+ + +D+G YSC N G L + + +
Sbjct: 476 MDEAQPLEGGRYRIHNNGTLEITRTTEEDAGSYSCWVENAIGKTAVIANLDIRNA-TKLR 534
Query: 185 QLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
P ++ L+L +C +H + L ++ W+ +G + ++N E I IDG
Sbjct: 535 VSPKNPRVSKSHMLELYCESKCDSHLQHSLKLS--WSKDG---EDFEINGTEDGRIVIDG 589
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I+N + D G Y C+ + + I+ T V V P P + + E H S + W
Sbjct: 590 ANLTISNVTLEDHGIYSCLAHTALDSIAEITQVTVLDVPDPPENLHLSERHNRSVRLSWE 649
Query: 301 DGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
G + IT Y + N W +E+ R G K ++ L P+ Y+
Sbjct: 650 AGDDHNSNITEYIVEFEGNREDPGRW---------EELTRVQG-KATTVLLRLAPYVRYQ 699
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE---------- 408
F+VIA NE+G PS PS + TP P + P I + ++ I WE
Sbjct: 700 FRVIAVNEVGKSRPSQPSVHHQTPPAAPDKNPQNIRVQASQPKEMIIKWEVHPDTAPVVV 759
Query: 409 ---------------PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-- 451
+P+++ + Y+I W K KE + + R
Sbjct: 760 SVDIINSTLVKVTWSTIPKDRVHGHLKGYQINWWKTKSLLDGRIHPKEVNILRFSGQRNY 819
Query: 452 --IPSEFYYTEYEVKVQAINDVGPGPESE 478
+PS ++E+ + V A N G GPESE
Sbjct: 820 GMVPSLDAFSEFHLTVLAYNSKGAGPESE 848
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 108/272 (39%), Gaps = 35/272 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G+P W + G+ L + E+ N L I ++ RD Y+C
Sbjct: 274 LMLECFAEGLPTPQVEWNKLGDDLPKRSETKENHG------NTLKIENIS-HRDKGNYRC 326
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N L T +S V+ +P + ES Y+ G + + C + P+P WK +
Sbjct: 327 TASNFLGT--ASHDFHVIVEEPPRWTKKPESAVYS-TGSSGILLCEADGVPQPTIQWKIN 383
Query: 127 G----NIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
G N + +G R F N + + + +Y C A+NVHG + + V+
Sbjct: 384 GFPADNHLFAGDVVFPREISFTN-------LHPNHTAVYQCEASNVHGTILANANIDVI- 435
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE-LETPNIN 237
+ P I N H+ L + V MD + LE
Sbjct: 436 ------DVIPLIQTKDEENYAT-VIGHSAFLHCEYFASPEAVVTWQRMDEAQPLEGGRYR 488
Query: 238 I-DGGLLEITNASFADAGEYECVVKSTVGKIS 268
I + G LEIT + DAG Y C V++ +GK +
Sbjct: 489 IHNNGTLEITRTTEEDAGSYSCWVENAIGKTA 520
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 49 VLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVT 108
V +++++N R +A N +K R + R+L P ES +G +
Sbjct: 224 VNSLKHVNDSRSSTEISSKA-NSIKQR----KPRLLLPPPETGS---ESAVVILKGETLM 275
Query: 109 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 168
+ C E P P+ W K G+ + K L I +S D G Y CTA+N G
Sbjct: 276 LECFAEGLPTPQVEWNKLGDDLPKRSETKENHGNTLKIENISHRDKGNYRCTASNFLGTA 335
Query: 169 ESKGRLIVLHGPSYYEQ 185
+IV P + ++
Sbjct: 336 SHDFHVIVEEPPRWTKK 352
>gi|1621283|gb|AAC50765.1| hBRAVO/Nr-CAM precursor [Homo sapiens]
Length = 1299
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 206/502 (41%), Gaps = 69/502 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 372 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 425
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 426 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 484
Query: 125 KDGNIIGSGGRRKIF---ENGNLLIS---------PVSRDDS-GIYSCTATNVHGMDESK 171
K GS I+ ENG L I PV++ DS G Y+C A N GM +++
Sbjct: 485 KGAK--GSALHEDIYVLHENGTLEIKDATWIVKEIPVAQKDSTGTYTCVARNKLGMAKNE 542
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
L P + + C + L + +W + N +L
Sbjct: 543 VHL-----------QPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSD 586
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGL 281
E +D L + + S D+G Y CV +T+ +S + V P P
Sbjct: 587 E--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNP 644
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRY 339
P +++ + S + WT G N PIT + I + W + +E
Sbjct: 645 PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE---------- 694
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G +
Sbjct: 695 VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSE 754
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYY 458
+L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F
Sbjct: 755 PDNLEITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF-- 809
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
Y +KVQA+ND+G PE VV
Sbjct: 810 VPYLIKVQALNDMGFAPEPAVV 831
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 123/314 (39%), Gaps = 41/314 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 283 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 335
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 336 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 392
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 393 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 451
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 452 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 502
Query: 241 GLLEITNASFA----------DAGEYECVVKSTVGKISTKTTV-----IVEGPPGLPGGV 285
G LEI +A++ G Y CV ++ +G + + +V+ +
Sbjct: 503 GTLEIKDATWIVKEIPVAQKDSTGTYTCVARNKLGMAKNEVHLQPEYAVVQRGSMVSFEC 562
Query: 286 QVVEVHKTSATIQW 299
+V H S T+ W
Sbjct: 563 KVKHDHTLSLTVLW 576
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 844 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 896
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 897 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 954
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 955 IVNPTLDSLTLEWDP 969
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 53 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 110 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS-GIYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 169 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 228
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 229 ISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 288
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+I + S AD+G Y+C+ K+
Sbjct: 289 A--EGLPTPIIYWAKED---GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNA 340
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 341 LGAIHHTISVRVKAAP 356
>gi|348568334|ref|XP_003469953.1| PREDICTED: protein sidekick-1 [Cavia porcellus]
Length = 2115
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 199/477 (41%), Gaps = 31/477 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ +N L++ + L I+ L+PE D ++QC A N
Sbjct: 312 CRAMGVPLPTLQWYKDAVSINK----LQNPRYQVLPSGGLRIQKLHPE-DSGIFQCFASN 366
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F + P ++T +G + C APKP WK+ NI+
Sbjct: 367 EGGEIQTHTYLDVTNVAPTFIQCP--ADTTVTDGMTAVLRCEVSGAPKPAVTWKRGNNIL 424
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 425 ASGSVRIPRFMLLESGGLQITPVFIQDAGNYTCYALNTEGSLNASATLTVWNRTSIIHPP 484
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I L C A + + + Y+W + I + + + DG LL I+
Sbjct: 485 EDRVVIKG-TTAALHCGATHDPRISLRYVWKKDNAVITPSSSSRIV---VEKDGSLL-IS 539
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + H + + W
Sbjct: 540 QTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPHPPQNLLASLSPSHSHAVVLSWVRPFD 599
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ HY I+ + NS W V +G E+ T + L P TY+F+V A
Sbjct: 600 GNSPVLHY-IVELSENNSPW-KVHLSDVGPEMTGIT-------VSGLTPARTYQFRVCAV 650
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 651 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLHGYIL 710
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+R E Q + + + + +T+YE++V A N G G S V
Sbjct: 711 RYRLAGLPGEHQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAV 764
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 107/278 (38%), Gaps = 23/278 (8%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P +++ W RNG L S L R N + D
Sbjct: 213 SETTLECIASARPVEELSVHWKRNGVRLTSG---LHSFGRRLTISNPTST-------DTG 262
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A + + + A L ++ P F P ES V I C P P
Sbjct: 263 LYVCEATLRGSAFEPARAKAFLSIIE-PPYFTAEP-ESRILVEVEETVDIMCRAMGVPLP 320
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R ++ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 321 TLQWYKDAVSINKLQNPRYQVLPSGGLRIQKLHPEDSGIFQCFASNEGGEIQTHTYLDVT 380
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
+ + Q P T+ LRC V + +N + G++ + +
Sbjct: 381 NVAPTFIQCPADTTVTDGMTAVLRCEVSGAPKPAVTWKRGNNILASGSVRIPRF----ML 436
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+IT DAG Y C +T G ++ T+ V
Sbjct: 437 LESGGLQITPVFIQDAGNYTCYALNTEGSLNASATLTV 474
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G+ P T + I AR + W + K
Sbjct: 1803 AEGSPGSPKDVLVTK-STSDLTLQWTEGSPGNSPTTGFVIEARPSDEGLW-----DMFVK 1856
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A NE GYGEPS PSP + + P+
Sbjct: 1857 DIPRSATSYTISLDK-LRQGVTYEFRVVAANEAGYGEPSRPSPAVSAQVEAPF 1908
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 192/504 (38%), Gaps = 69/504 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNPERDPAMYQCR 67
CE G P +W R +L S ++ + R+ + ++ +T ++ +D Y C
Sbjct: 405 CEVSGAPKPAVTWKRGNNILASGSVRI---PRFMLLESGGLQITPVFI---QDAGNYTCY 458
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKK 125
A N + +SA L V + S P + +G + C P+ ++VWKK
Sbjct: 459 ALNTEGSLNASATLTVWN-RTSIIHPP--EDRVVIKGTTAALHCGATHDPRISLRYVWKK 515
Query: 126 DGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
D +I S R + ++G+LLIS D G Y+C + G D RL V+ P
Sbjct: 516 DNAVITPSSSSRIVVEKDGSLLISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPH-- 573
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---VRIGNMDLNELETP----NI 236
PP+ NL S + ++++ +G V ++L+E +P
Sbjct: 574 ---PPQ-------NLLASLSPSHSHAVVLSWVRPFDGNSPVLHYIVELSENNSPWKVHLS 623
Query: 237 NIDGGLLEITNASFADAGEYE---CVVKST-VGKISTKTTVIV--EGPPGLPGGVQVVEV 290
++ + IT + A Y+ C V G+ ST+T+ ++ E PP P +V
Sbjct: 624 DVGPEMTGITVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPK-NIVAS 682
Query: 291 HKT--SATIQWT-------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+T S +QW +G +G I Y++ + G+ R
Sbjct: 683 GRTNQSIMVQWQPPPETEHNGVLHGY-ILRYRLAG--------------LPGEHQQRNIT 727
Query: 342 RKEAS--IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
E + + L+ W+ YE +V A N G G S +Y T P P +
Sbjct: 728 SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVAEY-TLQGVPTAPPQNVQAEAVN 786
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
+ W P P++ N N YK+ + E + GI I + +T
Sbjct: 787 STTVQFLWNPPPQQFINGINQGYKLLAWPADVPEAVTVLTIAPDFHGIHHGYITNLKKFT 846
Query: 460 EYEVKVQAINDVGPGPESEVVTIW 483
Y V G GP S +W
Sbjct: 847 AYFTSVLCFTTPGDGPPSTPQLVW 870
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I + D Y+C
Sbjct: 26 LVLTCLAEGSWPLEFKWMHN----DSELTTYSTEYKYIISSLQ--------KHDAGFYRC 73
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R + S+ +A + I + P+P+ W
Sbjct: 74 VVRNRMGALLQRKSEVQVAYMGNFMDTDQRKMVSQGHAAVLNLLPI----NSCPRPQVTW 129
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I +
Sbjct: 130 FREGHKIIPSNRIAITLENQLVILSTTASDAGAYYVQAVNERNGENKTSPFIHLSIARDM 189
Query: 181 SYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A +R++ L C A + +++ W NGVR+
Sbjct: 190 GTPEAMAPVIVVAPGNRSVVAGSSETTLECIASARPVEELSVHWKRNGVRL--------- 240
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + D G Y C
Sbjct: 241 TSGLHSFGRRLTISNPTSTDTGLYVC 266
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 38/231 (16%)
Query: 279 PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVI 332
P P +QV EV S +QW G+ PI ++ + R W + ++S
Sbjct: 1381 PAPPRELQVPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHDAT 1440
Query: 333 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 392
V+R L P+++Y+ ++ A N++G SS + T D P + P
Sbjct: 1441 ACAVER------------LRPFTSYKLRLKATNDIGDSNFSSETEAVTTLQDVPGEPPGS 1488
Query: 393 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSET 438
+ + I W+P E N Y+I++R+ K+ + ++E
Sbjct: 1489 VSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRELESEAGTSPEAKMLKSPSALRAEL 1548
Query: 439 LKE--YGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
+ + V + E Y YEV + A N +G P S V ++
Sbjct: 1549 TAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYNVIGESPASAPVEVF 1599
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 18/234 (7%)
Query: 255 EYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPIT 310
E V + +G ++T T I G PP LPG + + + SAT+Q+ G I+
Sbjct: 948 EVAAVTAAGMGLVTTST--ISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSIS 1005
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
+ + + + E V E + + I N L P++ Y F++ N +G
Sbjct: 1006 RWIVEGQVG---AIGDEEEWVCLYEEENEPDAQMLEIPN-LTPYTHYRFRMRQVNIVGPS 1061
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWR 427
S S T P AP+ I L + W PLP + N ++ Y++ +WR
Sbjct: 1062 PFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWR 1121
Query: 428 KKNDTEFQSETLKEYGNVGIAV-VRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
+ S L + N + + I +TEYE+++QA N +G GP SEVV
Sbjct: 1122 ----LDLPSSALAQVVNDRLERELTIEELEEWTEYELQMQAFNAIGAGPWSEVV 1171
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP I L ++W+P P E QN
Sbjct: 1577 YEVIMTAYNVIGESPASAPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQN 1635
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
YKI +W N E +E +K + V++ + +T+Y V + A N G GP
Sbjct: 1636 GNIQGYKIYYWEAGNRNE--TEKMKVL-FLPEPTVKLKNLTSHTKYLVSISAFNAAGDGP 1692
Query: 476 ESE 478
S+
Sbjct: 1693 RSD 1695
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P + EV TS I W I Y+I R +S + +G V +
Sbjct: 1282 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGVILGYQIAYRLA-SSRPHTFTTVEVGATVRQ 1340
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
+T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1341 FTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELQVPQA 1392
Query: 399 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEFY 457
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1393 EVTARSLQLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHDATACAVERLRP--- 1449
Query: 458 YTEYEVKVQAINDVGP---GPESEVVTIWHD 485
+T Y+++++A ND+G E+E VT D
Sbjct: 1450 FTSYKLRLKATNDIGDSNFSSETEAVTTLQD 1480
>gi|354471626|ref|XP_003498042.1| PREDICTED: neuronal cell adhesion molecule [Cricetulus griseus]
Length = 1258
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 202/493 (40%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P W NG + E P +D R D TI + N ER A+YQC
Sbjct: 375 TLICRANGNPKPRIGWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVYQC 428
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 429 NASNEYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 484
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 485 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 541
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + P + + C + L +W + + N + +ID
Sbjct: 542 TRIIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIMWLKDNGELPNDE-------RFSIDK 594
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +T+ D G Y C +T+ ++S + V P P P +++
Sbjct: 595 DHLVVTDVGDDDGGVYTCAANTTLDRVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 654
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I W + +E + + +
Sbjct: 655 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMREAGIWHHQAE----------VSGTQTTAQ 704
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 705 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 764
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 765 PLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 819
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 820 LNDVGFAPEPAAV 832
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 112/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ E D YQ
Sbjct: 284 LSLECIAEGLPTPIIYWIKE-----DGTLPV---NRTFYRNFKKTLQITQVSEADSGNYQ 335
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 336 CIAKNTLGAVHHTISVTV-KAAPYWIVAPQNLVLSPGENG--TLICRANGNPKPRIGWLT 392
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 393 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVL----- 446
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 447 --AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 498
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 499 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 541
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 185/503 (36%), Gaps = 74/503 (14%)
Query: 11 CEAFGVPDVTYSWFR--NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
C FG P T WF+ G L+ +D Y + DN + + Y C A
Sbjct: 472 CAFFGSPMPTIEWFKGTKGSALH--------EDIYVLHDNGTLEIPVAQKDSTGTYTCVA 523
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYA--GEGGNVTIFCN--PEAAPKPKFVWK 124
+N+L + L + R ++ YA G V+ C + P +W
Sbjct: 524 RNKLGMAKNEVHLEIKD-----PTRIIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIMWL 578
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
KD + + R I + +L+++ V DD G+Y+C A + L V+
Sbjct: 579 KDNGELPNDERFSI-DKDHLVVTDVGDDDGGVYTCAANTTLDRVSASAVLRVVAPTPTPA 637
Query: 180 PSYYEQLPP---KITIAAHRNLQL-------------RCSAHTEELLDVAYIWTHNGVRI 223
P Y PP ++T +++QL + E+ + A IW H
Sbjct: 638 PIYDVPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMREAGIWHHQAEVS 697
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283
G +L+ L N SF E + +S + S + P P
Sbjct: 698 GTQTTAQLK---------LSPYVNYSFRVMAE-NSIGRSVPSEASEQYLTKAAEPDQNPT 747
Query: 284 GVQVVEVHKTSATIQWT--DGATNGRPITHYKIIART-NWNSTWFNVSEHVIGKEVDRYT 340
V+ + + I W +G + P YK+ R + + W +V + V +Y
Sbjct: 748 AVEGLGTEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSV----VVANVSKYI 803
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
S VP Y KV A N++G+ P + ++ D P AP +
Sbjct: 804 ----VSGTPTFVP---YLIKVQALNDVGFA-PEPAAVMGHSGEDLPMVAPGNVHVNVVNS 855
Query: 401 GDLSISWEPLPREKQNAPNIYYKIF-WR-----KKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ W+P+P + Y+I+ W+ K+N + + L G+ + +P
Sbjct: 856 TLAEVHWDPVPLKSVRGHLQGYRIYYWKAQGSSKRNRRHIEKKILTFQGSKTHGM--LPG 913
Query: 455 EFYYTEYEVKVQAINDVGPGPES 477
Y+ YE+ V+ +N G GP S
Sbjct: 914 LQPYSHYELNVRVVNGKGEGPAS 936
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 116/316 (36%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + PL L I + R
Sbjct: 54 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLIINIMGEGRA 110
Query: 61 ---PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 111 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKERLEPITLRN-GQSLVLPCRPPVGL 169
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 170 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 229
Query: 175 IVL---------------------HGPSYYEQLPPKITIAAHRN----------LQLRCS 203
I L +G ++ PP L L C
Sbjct: 230 ISLKVISVDELNDTIAANLSDTEFYGAKPSKERPPTFLTPEGNESVKEELRGSVLSLECI 289
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+IT S AD+G Y+C+ K+T
Sbjct: 290 A--EGLPTPIIYWIKED---GTLPVNRTFYRNFK---KTLQITQVSEADSGNYQCIAKNT 341
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 342 LGAVHHTISVTVKAAP 357
>gi|28972161|dbj|BAC65534.1| mKIAA0343 protein [Mus musculus]
Length = 1202
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 198/483 (40%), Gaps = 45/483 (9%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 389 TLICRANGNPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQC 442
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 443 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 498
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 499 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 555
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + P + + C + L +W + + N + + D
Sbjct: 556 TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDK 608
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L +++ D G Y C +T+ S + V P P +++ S + WT
Sbjct: 609 DHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDVPNPPFDLELTNQLDKSVQLTWT 668
Query: 301 DGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
G N PIT + I + W + +E + + + L P+ Y
Sbjct: 669 PGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQLKLSPYVNYS 718
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V+A N +G PS S QY T A +P Q P + G G + +L I+W+PL + N P
Sbjct: 719 FRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGP 778
Query: 419 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 779 GLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEP 833
Query: 478 EVV 480
V
Sbjct: 834 AAV 836
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NVLTIRYLNPERDPAMY 64
L+ C A G+P W + +L + +R F ++ L I +++ E D Y
Sbjct: 298 LSLECIAEGLPTPIIYWIKEDGMLPA--------NRTFYRNFKKTLQITHVS-EADSGNY 348
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 349 QCIAKNALGAVHHTISVTV-KAAPYWIVAPQNLVLSPGENG--TLICRANGNPKPRISWL 405
Query: 125 KDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 406 TNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE-- 462
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 463 -----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDI 511
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 512 YVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 555
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 68 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 124
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 125 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IVLQNGQSLVLPCRPPIGL 183
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 184 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 243
Query: 175 IVL---------------------HGPSYYEQLPPKITI----AAHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 244 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 303
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+IT+ S AD+G Y+C+ K+
Sbjct: 304 A--EGLPTPIIYWIKED---GMLPANRTFYRNFK---KTLQITHVSEADSGNYQCIAKNA 355
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 356 LGAVHHTISVTVKAAP 371
>gi|119593195|gb|EAW72789.1| L1 cell adhesion molecule, isoform CRA_c [Homo sapiens]
Length = 1255
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 205/485 (42%), Gaps = 52/485 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 523
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 524 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 576
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 577 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 636
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 637 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 682
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 683 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 742
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 743 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 797
Query: 475 PESEV 479
PE +V
Sbjct: 798 PEPQV 802
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 185/485 (38%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRST-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 PESEV 479
S V
Sbjct: 699 EPSPV 703
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|345308001|ref|XP_001505313.2| PREDICTED: contactin-3-like [Ornithorhynchus anatinus]
Length = 505
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 289
+++ NI G L I N G+Y C+V++ V +S+ T +IV G PG P ++V +
Sbjct: 25 QMDPGNIGSSAGDLMIRNVQLKHGGKYVCMVETGVDSVSSSTDLIVRGSPGPPESLKVDK 84
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
+ T + W +G N PIT Y I ART ++ W V+ + + +D G+ +
Sbjct: 85 ITDTKVQLSWKEGIDNYSPITFYTIQARTPFSVGWQRVA--TVPEVID---GKTLTATVV 139
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L PW YEF+V+A N++G GEPSSPS + T P PS + GGGG +L I+W+P
Sbjct: 140 DLNPWVEYEFRVVANNKIGGGEPSSPSTKVRTEEAAPEVPPSEVSGGGGSRSELVITWDP 199
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+P E QN Y + +R + + +T+ + V R S ++ YEVKV N
Sbjct: 200 VPEELQNGEGFGYVVAFRPLGLSTW-IQTVVTSPDTPRYVFRNESILSFSPYEVKVGVYN 258
Query: 470 DVGPGPESEVVTIWH 484
+ G GP S V T++
Sbjct: 259 NKGEGPFSPVATVFS 273
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 129/351 (36%), Gaps = 28/351 (7%)
Query: 142 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 201
G+L+I V G Y C S LIV P E L K+ +QL
Sbjct: 36 GDLMIRNVQLKHGGKYVCMVETGVDSVSSSTDLIVRGSPGPPESL--KVDKITDTKVQLS 93
Query: 202 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CV 259
+ + + +T ++ + T IDG L T EYE V
Sbjct: 94 WKEGIDNYSPITF-YTIQARTPFSVGWQRVATVPEVIDGKTLTATVVDLNPWVEYEFRVV 152
Query: 260 VKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPITH 311
+ +G STK P P V ++ I W + NG
Sbjct: 153 ANNKIGGGEPSSPSTKVRTEEAAPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGF-G 211
Query: 312 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371
Y + R STW + V + RY R E+ ++ +S YE KV N G G
Sbjct: 212 YVVAFRPLGLSTW--IQTVVTSPDTPRYVFRNES-----ILSFSPYEVKVGVYNNKGEG- 263
Query: 372 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 431
P SP + ++P APS + + +SW +P ++ + + Y+I + +
Sbjct: 264 PFSPVATVFSAEEEPAIAPSGVFANSISSSVIEVSWNAIPWKRSSGRLLGYEIRYWTNGE 323
Query: 432 TEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
E + +K GN A +R + S YYT V+A N G GP S V
Sbjct: 324 REGSTNRVKVAGNETSARLRGLKSNLTYYT----AVRAYNSAGSGPFSATV 370
>gi|225637535|ref|NP_001139503.1| neuronal cell adhesion molecule isoform 2 precursor [Mus musculus]
Length = 1186
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 198/483 (40%), Gaps = 45/483 (9%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQC 426
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 427 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 482
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 483 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 539
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + P + + C + L +W + + N + + D
Sbjct: 540 TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDK 592
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L +++ D G Y C +T+ S + V P P +++ S + WT
Sbjct: 593 DHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDVPNPPFDLELTNQLDKSVQLTWT 652
Query: 301 DGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
G N PIT + I + W + +E + + + L P+ Y
Sbjct: 653 PGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQLKLSPYVNYS 702
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V+A N +G PS S QY T A +P Q P + G G + +L I+W+PL + N P
Sbjct: 703 FRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGP 762
Query: 419 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
+ YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG PE
Sbjct: 763 GLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGFAPEP 817
Query: 478 EVV 480
V
Sbjct: 818 AAV 820
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NVLTIRYLNPERDPAMY 64
L+ C A G+P W + +L + +R F ++ L I +++ E D Y
Sbjct: 282 LSLECIAEGLPTPIIYWIKEDGMLPA--------NRTFYRNFKKTLQITHVS-EADSGNY 332
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 333 QCIAKNALGAVHHTISVTV-KAAPYWIVAPQNLVLSPGENG--TLICRANGNPKPRISWL 389
Query: 125 KDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 390 TNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE-- 446
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 447 -----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDI 495
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 496 YVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IVLQNGQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 168 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 175 IVL---------------------HGPSYYEQLPPKITI----AAHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 228 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 287
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+IT+ S AD+G Y+C+ K+
Sbjct: 288 A--EGLPTPIIYWIKED---GMLPANRTFYRNFK---KTLQITHVSEADSGNYQCIAKNA 339
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 340 LGAVHHTISVTVKAAP 355
>gi|297711417|ref|XP_002832333.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Pongo
abelii]
Length = 1257
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 520 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 741 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLMVSNTSTFVPYEIKVQAVNSQG 795
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 796 KGPEPQVT 803
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 185/485 (38%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKLGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 PESEV 479
S V
Sbjct: 699 EPSPV 703
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKLGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|395754608|ref|XP_003779805.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Pongo
abelii]
Length = 1253
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 520 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 741 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLMVSNTSTFVPYEIKVQAVNSQG 795
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 796 KGPEPQVT 803
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKLGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 ---PESEVV 480
P SE V
Sbjct: 699 EPSPVSETV 707
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKLGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|33354081|dbj|BAC81124.1| L1 cell adhesion molecule [Pongo pygmaeus]
Length = 1255
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 352 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 403
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 404 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 461
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 462 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 517
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 518 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 572
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 573 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 632
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 633 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 678
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 679 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRW 738
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 739 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLMVSNTSTFVPYEIKVQAVNSQG 793
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 794 KGPEPQVT 801
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 258 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKLGEEDDGEYR 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 310 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 366
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 367 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 419
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 420 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 475
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 476 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 531
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 532 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 583
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 584 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 639
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 640 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 696
Query: 475 ---PESEVV 480
P SE V
Sbjct: 697 EPSPVSETV 705
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 50 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 105
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 106 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 164
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 165 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 224
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 225 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 278
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 279 -----GPMPADRVTYQNHNKTLQLLKLGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 330
Query: 279 P 279
P
Sbjct: 331 P 331
>gi|221316760|ref|NP_001137435.1| neural cell adhesion molecule L1 isoform 3 precursor [Homo sapiens]
gi|119593193|gb|EAW72787.1| L1 cell adhesion molecule, isoform CRA_a [Homo sapiens]
Length = 1248
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 401 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 459 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 518
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 519 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 571
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 572 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 631
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 632 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 677
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 678 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 737
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 738 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 792
Query: 475 PESEVV 480
PE +V
Sbjct: 793 PEPQVT 798
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 185/485 (38%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 364 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 417 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 472
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 473 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRST-IEKKGS 528
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 529 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 580
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 581 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 636
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 637 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 693
Query: 475 PESEV 479
S V
Sbjct: 694 EPSPV 698
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 47 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 102
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 103 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 161
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 162 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 221
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 222 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 275
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 276 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 327
Query: 279 P 279
P
Sbjct: 328 P 328
>gi|395754610|ref|XP_003779806.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Pongo
abelii]
Length = 1248
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 401 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 459 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 514
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 515 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 569
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 570 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 629
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 630 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 675
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 676 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRW 735
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 736 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLMVSNTSTFVPYEIKVQAVNSQG 790
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 791 KGPEPQVT 798
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 185/485 (38%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKLGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 364 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 417 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 472
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 473 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 528
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 529 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 580
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 581 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 636
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 637 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 693
Query: 475 PESEV 479
S V
Sbjct: 694 EPSPV 698
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 47 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 102
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 103 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 161
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 162 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 221
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 222 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 275
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 276 -----GPMPADRVTYQNHNKTLQLLKLGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 327
Query: 279 P 279
P
Sbjct: 328 P 328
>gi|4467833|emb|CAB37831.1| cell adhesion molecule L1 [Homo sapiens]
Length = 824
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 205/485 (42%), Gaps = 52/485 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 2 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 53
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 54 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 111
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 112 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 171
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 172 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 224
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 225 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 284
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 285 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 330
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 331 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 390
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 391 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 445
Query: 475 PESEV 479
PE +V
Sbjct: 446 PEPQV 450
>gi|13435353|ref|NP_076493.1| neural cell adhesion molecule L1 isoform 2 precursor [Homo sapiens]
gi|347807|gb|AAA59476.1| cell adhesion molecule L1 [Homo sapiens]
Length = 1253
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 523
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 524 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 576
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 577 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 636
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 637 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 682
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 683 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 742
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 743 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 797
Query: 475 PESEVV 480
PE +V
Sbjct: 798 PEPQVT 803
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRST-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 ---PESEVV 480
P SE V
Sbjct: 699 EPSPVSETV 707
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|4557707|ref|NP_000416.1| neural cell adhesion molecule L1 isoform 1 precursor [Homo sapiens]
gi|1705571|sp|P32004.2|L1CAM_HUMAN RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
Short=NCAM-L1; AltName: CD_antigen=CD171; Flags:
Precursor
gi|472989|emb|CAA82564.1| neural cell adhesion molecule L1 [Homo sapiens]
gi|3068548|gb|AAC14352.1| L1 cell adhesion molecule [Homo sapiens]
gi|116496991|gb|AAI26230.1| L1 cell adhesion molecule [Homo sapiens]
gi|119593194|gb|EAW72788.1| L1 cell adhesion molecule, isoform CRA_b [Homo sapiens]
gi|168270912|dbj|BAG10249.1| neural cell adhesion molecule L1 precursor [synthetic construct]
gi|187951475|gb|AAI36448.1| L1 cell adhesion molecule [Homo sapiens]
Length = 1257
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 523
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 524 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 576
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 577 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 636
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 637 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 682
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 683 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 742
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 743 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 797
Query: 475 PESEVV 480
PE +V
Sbjct: 798 PEPQVT 803
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRST-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 ---PESEVV 480
P SE V
Sbjct: 699 EPSPVSETV 707
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|158260531|dbj|BAF82443.1| unnamed protein product [Homo sapiens]
Length = 1257
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 523
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 524 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 576
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 577 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 636
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 637 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 682
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 683 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 742
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 743 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 797
Query: 475 PESEVV 480
PE +V
Sbjct: 798 PEPQVT 803
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 185/485 (38%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRST-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 PESEV 479
S V
Sbjct: 699 EPSPV 703
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVTLQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|410335591|gb|JAA36742.1| L1 cell adhesion molecule [Pan troglodytes]
Length = 1248
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 401 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 459 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 514
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 515 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 569
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 570 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 629
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 630 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 675
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 676 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVITWKPLRW 735
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 736 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQG 790
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 791 KGPEPQVT 798
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 364 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 417 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 472
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 473 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 528
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 529 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 580
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 581 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 636
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 637 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 693
Query: 475 ---PESEVV 480
P SE V
Sbjct: 694 EPSPVSETV 702
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 115/309 (37%), Gaps = 62/309 (20%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG--------------ELLNSETLPLEDQDRYFIQDNVLT 51
D++ CEA G P+V + W R+G + L+S + + + F Q
Sbjct: 47 DISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSLHSGSFTITGNNSNFAQ----- 101
Query: 52 IRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC 111
R +Y+C A N+L T S + P + K ++ EG +V + C
Sbjct: 102 -------RFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPC 153
Query: 112 NPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------- 161
NP + +P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 154 NPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRT 213
Query: 162 -----------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 210
+ M + K RL+ S + + + L L C A
Sbjct: 214 IIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTP 267
Query: 211 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
+ ++ G M + + N N LL++ D GEY C+ ++++G
Sbjct: 268 TIKWLRPS-----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHA 319
Query: 271 TTVIVEGPP 279
V VE P
Sbjct: 320 YYVTVEAAP 328
>gi|392332542|ref|XP_003752615.1| PREDICTED: protein sidekick-1-like [Rattus norvegicus]
Length = 2114
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 199/478 (41%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ L+ L++ + L I+ L+PE D ++QC A N
Sbjct: 311 CRAMGVPLPTLQWYKDAVPLSK----LQNPRYRVLPSGGLHIQKLSPE-DSGIFQCFANN 365
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F +RP++ T +G + C APKP WKK +I+
Sbjct: 366 EGGEIQTHTYLDVTNIAPAFTQRPVD--TTVTDGMTAVLRCEVSGAPKPAITWKKGNHIL 423
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C ATN + L V + S
Sbjct: 424 ASGSVRIPRFMLLESGGLRIAPVFIQDAGNYACYATNTEASVNASAMLTVWNRTSIVHPP 483
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I L C A + + Y+W + I + + + DG L+ I+
Sbjct: 484 EDRVVIKG-TTATLCCGATHDPRTSLRYVWKKDNAVITPSSSSRIV---VEKDGSLV-IS 538
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + S T+ W
Sbjct: 539 QTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPHPPQNLLASLSSARSHSVTLSWVRPFD 598
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y + N NS W V +G E+ T + L P TY+F+V A
Sbjct: 599 GNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEMAGVT-------VSGLTPARTYQFRVCAV 649
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 650 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 709
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E Q + + + + +T+YE++V A N G G S VT
Sbjct: 710 RYRLAGLPGEHQQRNIS---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 764
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G T P T Y I AR + W + K
Sbjct: 1802 AEGSPGSPRNVLVTK-SASELTLQWTEGNTGNTPTTGYVIEARPSDEGLW-----DMFAK 1855
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1856 DIPRSATSYTVGLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1907
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 105/266 (39%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W RN +SE + RY I +++ L D Y+C
Sbjct: 25 LVLTCLAEGSWPLEFKWIRN----DSELTAYSSEYRYIIP----SLQKL----DAGFYRC 72
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ +A + I + P+P+ W
Sbjct: 73 VVRNRMGALLQRKSEIQVAYMGNFMDADQRKTVSQGHAALLNLLPI----TSCPRPQVTW 128
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I V
Sbjct: 129 FREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNERNGENKTSPFIHLSVARDT 188
Query: 181 SYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 189 GTQEAMAPVIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL--------- 239
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I N + AD G Y C
Sbjct: 240 TSGLHSYGRRLTIINPTSADTGMYVC 265
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 17/156 (10%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
V EV S +QW G+ PI ++ + R W S + E
Sbjct: 1388 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSI----------SHE 1437
Query: 345 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
A++ V L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1438 ATLCAVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTTSS 1497
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 438
+ I W+P E N Y+I++R E +SET
Sbjct: 1498 VLIQWQPPRDESLNGLLQGYRIYYR-----ELESET 1528
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 22/228 (9%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 324
T+ ++ PG P G H TS+ IQW D + NG + Y+I R + T
Sbjct: 1471 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELESETG 1529
Query: 325 FN------VSEHVIGKEVDRYTGRKEASIENVLVPWST--------YEFKVIAGNELGYG 370
+ S + E+ + K + + L + YE + A N +G
Sbjct: 1530 LSPEPKTLKSPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYNIIGES 1589
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
S P + A P AP I L ++W+P P E QN YK+++ +
Sbjct: 1590 PASVPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEA- 1647
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
D+ ++E +K + VV+I +T+Y V + A N G GP S+
Sbjct: 1648 DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLVSISAFNAAGDGPRSD 1694
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 958 LTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 1013
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1014 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVGPSPFSQSS 1066
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 433
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 1067 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 1126
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ + + + I +TEYE+++QA N +G GP SE+V
Sbjct: 1127 ALAQVVNDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELV 1170
>gi|33354077|dbj|BAC81122.1| L1 cell adhesion molecule [Homo sapiens]
Length = 1255
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 352 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 403
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 404 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 461
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 462 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 521
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 522 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 574
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 575 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 634
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 635 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 680
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 740
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 741 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 795
Query: 475 PESEVV 480
PE +V
Sbjct: 796 PEPQVT 801
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 258 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 310 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 366
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 367 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 419
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 420 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 475
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 476 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRST-IEKKGS 531
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 532 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 583
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 584 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 639
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 640 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 696
Query: 475 ---PESEVV 480
P SE V
Sbjct: 697 EPSPVSETV 705
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 50 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 105
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 106 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 164
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 165 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 224
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 225 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 278
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 279 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 330
Query: 279 P 279
P
Sbjct: 331 P 331
>gi|35010|emb|CAA42508.1| Neural cell adhesion molecule L1 [Homo sapiens]
Length = 1257
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVEGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 523
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 524 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 576
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 577 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLVTQSQVRVSWS 636
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 637 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 682
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 683 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 742
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 743 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 797
Query: 475 PESEVV 480
PE +V
Sbjct: 798 PEPQVT 803
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 174/451 (38%), Gaps = 45/451 (9%)
Query: 41 DRYFIQDNVLTIRYLN-PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET 99
DR Q++ T++ L E D Y+C A+N L + + + V P + +P +S
Sbjct: 286 DRVTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHL 343
Query: 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIY 157
Y G G + C E P+P+ W+ +G + + + + + G L++S V D+ +
Sbjct: 344 Y-GPGETARLDCQVEGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVT 402
Query: 158 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEEL 209
C A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 403 QCEARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPV 455
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 456 PSVQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTI 508
Query: 270 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 329
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 509 MANLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE 562
Query: 330 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 389
+G + D+Y + + L + +A EL E + +P P
Sbjct: 563 --LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLV 619
Query: 390 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIA 448
S + + +SW P E NAP Y I + K + +L K GN
Sbjct: 620 LSDL--HLVTQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTST 675
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
+++ Y Y +V AIN GPG S V
Sbjct: 676 TLKLSP---YVHYTFRVTAINKYGPGEPSPV 703
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 113/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGIRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + +
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSTH------LVALQGQPLVLECIAEGFPTPTIKSVRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|397466242|ref|XP_003804874.1| PREDICTED: neural cell adhesion molecule L1 [Pan paniscus]
Length = 1257
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 520 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 741 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQG 795
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 796 KGPEPQVT 803
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 ---PESEVV 480
P SE V
Sbjct: 699 EPSPVSETV 707
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|392352344|ref|XP_003751180.1| PREDICTED: protein sidekick-1-like [Rattus norvegicus]
Length = 1980
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 199/478 (41%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ L+ L++ + L I+ L+PE D ++QC A N
Sbjct: 184 CRAMGVPLPTLQWYKDAVPLSK----LQNPRYRVLPSGGLHIQKLSPE-DSGIFQCFANN 238
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F +RP++ T +G + C APKP WKK +I+
Sbjct: 239 EGGEIQTHTYLDVTNIAPAFTQRPVD--TTVTDGMTAVLRCEVSGAPKPAITWKKGNHIL 296
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C ATN + L V + S
Sbjct: 297 ASGSVRIPRFMLLESGGLRIAPVFIQDAGNYACYATNTEASVNASAMLTVWNRTSIVHPP 356
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I L C A + + Y+W + I + + + DG L+ I+
Sbjct: 357 EDRVVIKG-TTATLCCGATHDPRTSLRYVWKKDNAVITPSSSSRIV---VEKDGSLV-IS 411
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + S T+ W
Sbjct: 412 QTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPHPPQNLLASLSSARSHSVTLSWVRPFD 471
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y + N NS W V +G E+ T + L P TY+F+V A
Sbjct: 472 GNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEMAGVT-------VSGLTPARTYQFRVCAV 522
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 523 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 582
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E Q + + + + +T+YE++V A N G G S VT
Sbjct: 583 RYRLAGLPGEHQQRNIS---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 637
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G T P T Y I AR + W + K
Sbjct: 1668 AEGSPGSPRNVLVTK-SASELTLQWTEGNTGNTPTTGYVIEARPSDEGLW-----DMFAK 1721
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1722 DIPRSATSYTVGLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1773
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 22/228 (9%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 324
T+ ++ PG P G H TS+ IQW D + NG + Y+I R + T
Sbjct: 1337 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELESETG 1395
Query: 325 FN------VSEHVIGKEVDRYTGRKEASIENVLVPWST--------YEFKVIAGNELGYG 370
+ S + E+ + K + + L + YE + A N +G
Sbjct: 1396 LSPEPKTLKSPSALRAELTAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYNIIGES 1455
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
S P + A P AP I L ++W+P P E QN YK+++ +
Sbjct: 1456 PASVPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEA- 1513
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
D+ ++E +K + VV+I +T+Y V + A N G GP S+
Sbjct: 1514 DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLVSISAFNAAGDGPRSD 1560
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 830 LTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 885
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 886 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVGPSPFSQSS 938
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 433
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 939 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 998
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ + + + I +TEYE+++QA N +G GP SE+V
Sbjct: 999 ALAQVVNDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELV 1042
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 19/154 (12%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
V EV S +QW G+ PI ++ + + + W + +
Sbjct: 1260 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQSPMLPSGKWALRALLI------------- 1306
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
S L P+++Y+ ++ A N++G + S+ + T D P + P + +
Sbjct: 1307 -SFHCRLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1365
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 438
I W+P E N Y+I++R E +SET
Sbjct: 1366 IQWQPPRDESLNGLLQGYRIYYR-----ELESET 1394
>gi|302565106|ref|NP_001180609.1| neural cell adhesion molecule L1 precursor [Pan troglodytes]
Length = 1257
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 520 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 741 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQG 795
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 796 KGPEPQVT 803
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 ---PESEVV 480
P SE V
Sbjct: 699 EPSPVSETV 707
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|4732113|gb|AAD28610.1|AF129167_1 neural cell adhesion molecule L1 [Chlorocebus aethiops]
Length = 1248
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 204/489 (41%), Gaps = 58/489 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPMEELAKDQKYRIQRGALILSNAQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 401 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH----GPS 181
DG + R + NG L I + +D+G Y C A N + IV H +
Sbjct: 459 DGTTVLQDERFFPYANGTLGIRDLRANDTGRYLCLAAN-----DQNNVTIVAHLKVKDAT 513
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDG 240
Q P + C A + L + W +G DL EL ++ I+
Sbjct: 514 QITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIED 568
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATI 297
G L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 569 GRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRV 628
Query: 298 QWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
W+ + PI Y I +A W S +GK + S L
Sbjct: 629 SWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKL 674
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 675 SPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLR 734
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
NAP + Y++ WR + E + V + + + + YE+KVQA+N
Sbjct: 735 WMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQ 789
Query: 472 GPGPESEVV 480
G GPE +V
Sbjct: 790 GKGPEPQVT 798
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 184/485 (37%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S D+ + C A N HG L++ + Y
Sbjct: 364 NGIPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 417 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 472
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 473 AN---GTLGIRDLRANDTGRYLCLAANDQNNVTIVAHLKVKDATQITQGPRSA-IEKKGS 528
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 529 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 580
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 581 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 636
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 637 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 693
Query: 475 PESEV 479
S V
Sbjct: 694 EPSPV 698
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 47 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 102
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + C+P + +P
Sbjct: 103 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPSAEP 161
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 162 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 221
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 222 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 275
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 276 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 327
Query: 279 P 279
P
Sbjct: 328 P 328
>gi|41281630|ref|NP_571458.1| neural cell adhesion molecule L1.1 precursor [Danio rerio]
gi|36142988|gb|AAQ85079.1| neural adhesion molecule L1.1 [Danio rerio]
Length = 1269
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 209/499 (41%), Gaps = 65/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCR 67
C+A G+P +W NG +P+ D R + L + + D A+YQC
Sbjct: 359 CQADGIPAPNITWSING-------VPVSGTDVDPRRRVSSGKLILSNVE-FSDTAVYQCE 410
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
A N+ + + + V+ L P+ P E A G V + C +P PK W+
Sbjct: 411 AVNKHGSILINTHVHVVEL-PAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILD 469
Query: 128 NIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPS 181
+I S + NG+L IS VS +DS Y+C+ + + L VL+ GP
Sbjct: 470 SIPALSNAKISQMTNGSLKISNVSEEDSNRYTCSVSETN--KSISAELEVLNRTKIVGP- 526
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRI----GNMDLNELETPNI 236
P + + + L C + L + W +G +I N +E+E
Sbjct: 527 -----PQNLHVIRGSDAILHCKYTVDHNLKSPTVQWKKDGHKITASTSNDKYHEIE---- 577
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L++ + D G Y C V +T+ + + V+ P P +++ E + S T
Sbjct: 578 ----GSLKVLDVQMEDMGIYSCGVSTTLDSDTASGYITVQDKPDPPQSLKLSEKMERSVT 633
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE--ASIENVLVPW 354
I W N P+T Y I N E + +Y + +E L P+
Sbjct: 634 ISWMPSVENNSPVTEYVI---------EMNEGETPDEGQWQKYRSVSQDIRQLEIHLQPY 684
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
S Y F++ A N +G PS S Y+TPA KP + P + + ISW+ + R +
Sbjct: 685 SKYHFQIRAVNSIGTSAPSESSLSYSTPAAKPDRNPENVMTLSTDPKSMIISWQEMDRRQ 744
Query: 415 QNAPNIYYKIFWRKKNDTEFQ-SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
N P YK+FWR+ D+ +E+ +V + + + + +E+KVQA+ND+G
Sbjct: 745 FNGPGFQYKVFWRRAADSGAHWTES-----SVSNPPLLVNNTGTFVSFEIKVQAVNDLGA 799
Query: 474 GPESEVVTIWHDPLVIISY 492
PE PL +I Y
Sbjct: 800 APE---------PLTVIGY 809
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 27/297 (9%)
Query: 25 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 84
R+G L + + + +D Y + + + P+ ++Y + + +K R R
Sbjct: 193 RDGNLYFANLIANDSRDDYTCNAHYINASIILPKEPMSIYVTPSNSVVKNR------RAK 246
Query: 85 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 144
P+ + S G +T+ C PE P P+ W + + + +K++ N L
Sbjct: 247 LHHPAGAR----SSYLVLRGQTLTLECIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWL 302
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
I V D G Y CTA N + + V P Y+ + P + A ++L C A
Sbjct: 303 QIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAP-YWTRRPEEHLYAPGETVRLDCQA 361
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
++ W+ NGV + D++ P + G L ++N F+D Y+C +
Sbjct: 362 DGIPAPNIT--WSINGVPVSGTDVD----PRRRVSSGKLILSNVEFSDTAVYQCEAVNKH 415
Query: 265 GKISTKTTV-IVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI--THYKII 315
G I T V +VE LP + + AT T D T G P+ H++I+
Sbjct: 416 GSILINTHVHVVE----LPAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL 468
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 118/510 (23%), Positives = 194/510 (38%), Gaps = 89/510 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C FG P W E+L+S +P L + + + L I ++ E D Y C
Sbjct: 453 CRTFGSPLPKIHW----EILDS--IPALSNAKISQMTNGSLKISNVS-EEDSNRYTCSVS 505
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN---PEAAPKPKFVWKKD 126
K+ SA+L VL K + G + + C P WKKD
Sbjct: 506 ETNKS--ISAELEVLNRT---KIVGPPQNLHVIRGSDAILHCKYTVDHNLKSPTVQWKKD 560
Query: 127 GN-IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
G+ I S K E G+L + V +D GIYSC + D + G + V P
Sbjct: 561 GHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCGVSTTLDSDTASGYITVQDKPD--- 617
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAY---IWTHNGVRIGNMDLNELETPN------ 235
PP+ L+ S E + +++ + ++ V +++NE ETP+
Sbjct: 618 --PPQ---------SLKLSEKMERSVTISWMPSVENNSPVTEYVIEMNEGETPDEGQWQK 666
Query: 236 ---INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-----PGGVQV 287
++ D LEI ++ ++ +++G + + + P P V
Sbjct: 667 YRSVSQDIRQLEIHLQPYSKY-HFQIRAVNSIGTSAPSESSLSYSTPAAKPDRNPENVMT 725
Query: 288 VEVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
+ S I W D P YK+ R + D E+
Sbjct: 726 LSTDPKSMIISWQEMDRRQFNGPGFQYKVFWR----------------RAADSGAHWTES 769
Query: 346 SIEN--VLV----PWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIGGG 396
S+ N +LV + ++E KV A N+LG ++P P + D P +APS +
Sbjct: 770 SVSNPPLLVNNTGTFVSFEIKVQAVNDLG----AAPEPLTVIGYSGEDFPLEAPSALSVT 825
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGI------AV 449
+ + + W P+ E + YKI+ R K + ++ GN + A
Sbjct: 826 ELQKTSVMVRWSPVRPESVRGHLLGYKIYLRMKGPSGRLRAGRSPAVGNPTVIEVPADAA 885
Query: 450 VRIPSEF-YYTEYEVKVQAINDVGPGPESE 478
+I S+ YY++Y + + A N G GP SE
Sbjct: 886 EKIVSDLQYYSDYTLTITAFNSKGEGPHSE 915
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 117/304 (38%), Gaps = 61/304 (20%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGE-----LLNSETL-PLEDQDRYFIQDNVLTIRYLNPER 59
D+ CEA G P ++ W ++G+ L S TL P D +F Q
Sbjct: 66 DVNLACEASGDPSPSFRWVKDGKQFGEVLSESGTLTPHPTMDLHFYQ------------- 112
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y+C A N+L T S+ PS K + G + + CN P+++
Sbjct: 113 --GTYRCYAANELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVT 170
Query: 119 PKFVW-KKDGNIIGSGGRRKIFENGNL----LISPVSRDDSGIYSCTATNVHGMDESKGR 173
PK W + I R I +GNL LI+ SRDD Y+C N H ++ S
Sbjct: 171 PKIHWMDMQFHHIPLNERVTISRDGNLYFANLIANDSRDD---YTC---NAHYINAS--- 221
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLR--CSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
I+L + P ++ +R +L A + L+ T + G L
Sbjct: 222 -IILPKEPMSIYVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLECIPEG------L 274
Query: 232 ETPNIN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
TP ++ ID L L+I N +D GEY C +++ + TV V
Sbjct: 275 PTPEVHWDRIDSALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTV 334
Query: 276 EGPP 279
E P
Sbjct: 335 EAAP 338
>gi|33354079|dbj|BAC81123.1| L1 cell adhesion molecule [Pan troglodytes]
Length = 1255
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 352 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 403
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 404 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 461
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 462 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 517
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 518 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 572
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 573 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 632
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 633 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 678
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 679 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVITWKPLRW 738
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 739 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQG 793
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 794 KGPEPQVT 801
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 258 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 310 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 366
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 367 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 419
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 420 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 475
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 476 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 531
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 532 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 583
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 584 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 639
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 640 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 696
Query: 475 ---PESEVV 480
P SE V
Sbjct: 697 EPSPVSETV 705
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 50 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 105
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 106 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 164
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 165 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 224
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 225 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 278
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 279 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 330
Query: 279 P 279
P
Sbjct: 331 P 331
>gi|384942430|gb|AFI34820.1| neural cell adhesion molecule L1 isoform 3 precursor [Macaca
mulatta]
gi|387540646|gb|AFJ70950.1| neural cell adhesion molecule L1 isoform 3 precursor [Macaca
mulatta]
Length = 1248
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 206/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPMEELAKDQKYRIQRGALILSNAQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 401 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYVAVQGSTAYLLCKAFGAPVPSVQWLDE 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 459 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 514
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 515 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 569
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 570 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 629
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 630 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 675
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 676 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRW 735
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 736 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQG 790
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 791 KGPEPQVT 798
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 184/485 (37%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S D+ + C A N HG L++ + Y
Sbjct: 364 NGIPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNL--------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 417 VQLPAKILTADNQTYVAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 472
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 473 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 528
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 529 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 580
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 581 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 636
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 637 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 693
Query: 475 PESEV 479
S V
Sbjct: 694 EPSPV 698
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 47 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 102
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + C+P + +P
Sbjct: 103 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPSAEP 161
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 162 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 221
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 222 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 275
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 276 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 327
Query: 279 P 279
P
Sbjct: 328 P 328
>gi|301786901|ref|XP_002928861.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
L1-like [Ailuropoda melanoleuca]
Length = 1229
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 211/492 (42%), Gaps = 64/492 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 323 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 374
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A EG + C AP P W K
Sbjct: 375 ARNRHGLLLANAYIYVVQL-PAKILTP-DNETYMAVEGSTAYLLCKAFGAPVPSVQWLDK 432
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHG 179
+G + R + NG L I + +D+G Y C A N V + K + G
Sbjct: 433 EGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTVVANLQVKDATQITQG 492
Query: 180 P-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNIN 237
P S E+ K+T C A + L + W +G +L E ++
Sbjct: 493 PQSAIEKKGSKVTFT--------CEASFDPSLQHSITWRGDG-----RNLQEFGDSDKYF 539
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTS 294
I+ G L I + ++D G Y CV + + + ++ ++V G PG +++ + H ++
Sbjct: 540 IEDGRLVIHSLDYSDQGNYSCVAGTELDVVESRAELLVVGSPGPVPQLELSDRHLLKQSQ 599
Query: 295 ATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ W+ + PI Y I +A W S +GK + S
Sbjct: 600 VRLSWSPADDHNAPIEKYDIEFEDKEMAPQEWYS---------LGK-----VPGNQTSTT 645
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+
Sbjct: 646 LKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITWK 705
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
PL NAP + Y++ WR + E + V ++ + + + YE+KVQ++
Sbjct: 706 PLRWMDWNAPQVQYRVQWRPQGTRGTWQEQI-----VSDPLLVVSNTSTFVPYEIKVQSV 760
Query: 469 NDVGPGPESEVV 480
N G GPE ++
Sbjct: 761 NSQGKGPEPQIT 772
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 184/488 (37%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 229 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLNVMEEDDGEYR 280
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 281 CLAENSLGSDRHTYYITV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 337
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 338 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 390
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
QLP KI + + T LL A+ G + ++ + E + D
Sbjct: 391 VQLPAKI-LTPDNETYMAVEGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDERFF 444
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
TN + D G Y C + ++ + V+ + G Q + K +
Sbjct: 445 PYTNGTLGIRDLQANDTGHYFCQAANDQNNVTVVANLQVKDATQITQGPQSA-IEKKGSK 503
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H W N+ E + D+Y + + L
Sbjct: 504 VTFTCEASFDPSLQH-----SITWRGDGRNLQEF---GDSDKYFIEDGRLVIHSLDYSDQ 555
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +AG EL E + +P P S K + +SW P + N
Sbjct: 556 GNYSCVAGTELDVVESRAELLVVGSPGPVPQLELS--DRHLLKQSQVRLSWSPA--DDHN 611
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 612 APIEKYDIEFEDKEMAPQEWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 668
Query: 475 --PESEVV 480
P SE V
Sbjct: 669 PSPASETV 676
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 115/304 (37%), Gaps = 52/304 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W R+G E L + I N +R
Sbjct: 21 DISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPRSGSFTITGNNSNFA----QR 76
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAA 116
+Y+C A N+L T S + P + K +P+E E EG +V + C+P +
Sbjct: 77 FQGIYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVE----EGESVILPCHPPPS 132
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------ 161
+P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 133 AEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKE 192
Query: 162 ------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
+ M + K RL+ S + + + L L C A + ++
Sbjct: 193 PIDLRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWL 246
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G M + + N N L++ N D GEY C+ ++++G + V
Sbjct: 247 RPS-----GPMPADRVTYQNHN---KTLQLLNVMEEDDGEYRCLAENSLGSDRHTYYITV 298
Query: 276 EGPP 279
E P
Sbjct: 299 EAAP 302
>gi|432097796|gb|ELK27832.1| Neural cell adhesion molecule L1 [Myotis davidii]
Length = 1206
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 207/487 (42%), Gaps = 53/487 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P+ +W NG + E L +DQ +Y IQ L + + P D + QC A+N
Sbjct: 353 CQVQGRPEPEVTWRING--IPVEELLAKDQ-KYRIQHGALILSNVQPS-DTMVTQCEARN 408
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
+ ++A + V+ L P+ P ++ETY A EG + C AP P W K+G
Sbjct: 409 RHGLLLANAYIYVVQL-PAKILTP-DNETYLAVEGSTAYLLCKVFGAPVPSVQWLDKEGK 466
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQ 185
+ R + NG L I + +D+G Y C A N D++ ++ + + Q
Sbjct: 467 TVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAAN----DQNNVTIVANLQVKDATRITQ 522
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI---GNMDLNELETPNINIDGGL 242
P + C A + L + W +G + G+ D I+ G
Sbjct: 523 GPQSTIKKKGSRVTFTCQATFDPSLQQSITWRRDGRSLQEPGDSD-------KYFIEDGH 575
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQW 299
L I + ++D G Y CV + + + ++ + V G PG +++ + H ++ + W
Sbjct: 576 LVIHSLDYSDQGNYSCVASTKLDVVESRAELQVVGSPGPVPQLELSDRHLLKQSQVRLSW 635
Query: 300 TDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
+ + PI Y I +A W S +GK + S L P
Sbjct: 636 SPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSP 681
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 682 YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWM 741
Query: 414 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
NAP + Y++ WR + E + V + + + + YE+KVQ IN G
Sbjct: 742 DWNAPQVQYRVQWRPQGTRGAWQEQI-----VSDPFLVVSNTSTFVPYEIKVQTINSQGK 796
Query: 474 GPESEVV 480
GPE +V
Sbjct: 797 GPEPQVT 803
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 171/449 (38%), Gaps = 70/449 (15%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E D Y+C A+N L + + + V P + +P +S Y G G + C + P
Sbjct: 303 EEDDGEYRCLAENSLGSDRHAYYVTV-EAAPYWLHKP-QSRLY-GPGETARLDCQVQGRP 359
Query: 118 KPKFVWKKDG----NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
+P+ W+ +G ++ + +I ++G L++S V D+ + C A N HG
Sbjct: 360 EPEVTWRINGIPVEELLAKDQKYRI-QHGALILSNVQPSDTMVTQCEARNRHG------- 411
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L++ + Y QLP KI + L T LL + G + ++ + E
Sbjct: 412 LLLANAYIYVVQLPAKI-LTPDNETYLAVEGSTAYLLCKVF-----GAPVPSVQWLDKEG 465
Query: 234 PNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
+ D TN + D G Y C + ++ + V+ + G Q
Sbjct: 466 KTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATRITQGPQ 525
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--------TWFNVSEHVIGKEVDR 338
+ K + + +T AT P I R + S +F H++ +D
Sbjct: 526 ST-IKKKGSRVTFTCQATFD-PSLQQSITWRRDGRSLQEPGDSDKYFIEDGHLVIHSLD- 582
Query: 339 YTGRKEASI---ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
Y+ + S + V S E +V+ G P P PQ +D+ S++
Sbjct: 583 YSDQGNYSCVASTKLDVVESRAELQVV-------GSP-GPVPQLEL-SDRHLLKQSQV-- 631
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPS 454
+SW P + NAP Y I + K + +L K GN +++
Sbjct: 632 --------RLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP 681
Query: 455 EFYYTEYEVKVQAINDVGPG---PESEVV 480
Y Y +V AIN GPG P SE V
Sbjct: 682 ---YVHYTFRVTAINKYGPGEPSPASETV 707
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
+++ CEA G P+V + W R+G P E+ D Q TI N +R
Sbjct: 52 EISLKCEASGKPEVMFRWTRDGVHFK----PNEELDVTVKQAPHSGSFTIAGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAA 116
Y+C A N L T S + P + K +P+E E EG +V + C+P +
Sbjct: 108 FQGTYRCFASNDLGTAMSHEIQLMAEGAPKWPKETVKPVEVE----EGESVILPCHPPPS 163
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA 161
+P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 164 AEPLRIYWMNSKIMHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHA 211
>gi|387849148|ref|NP_001248708.1| L1 cell adhesion molecule precursor [Macaca mulatta]
gi|380812680|gb|AFE78214.1| neural cell adhesion molecule L1 isoform 1 precursor [Macaca
mulatta]
Length = 1257
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 206/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPMEELAKDQKYRIQRGALILSNAQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYVAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 520 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 741 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQG 795
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 796 KGPEPQVT 803
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 186/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S D+ + C A N HG L++ + Y
Sbjct: 369 NGIPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNL--------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYVAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 ---PESEVV 480
P SE V
Sbjct: 699 EPSPVSETV 707
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + C+P + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|281183300|ref|NP_001162516.1| neural cell adhesion molecule L1 [Papio anubis]
gi|160213446|gb|ABX10974.1| L1 cell adhesion molecule, isoform 1 (predicted) [Papio anubis]
Length = 1324
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 206/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + P D + QC
Sbjct: 421 CQVQGRPQPEVTWRING-------IPMEELAKDQKYRIQRGALILSNAQPS-DTMVTQCE 472
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 473 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 530
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 531 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAAN----DQNNVTIVANLKVKDATQ 586
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 587 ITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 641
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 642 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVS 701
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 702 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 747
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 748 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRW 807
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 808 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQG 862
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 863 KGPEPQVT 870
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 184/485 (37%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 327 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLKVGEEDDGEYR 378
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 379 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 435
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S D+ + C A N HG L++ + Y
Sbjct: 436 NGIPMEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHG-------LLLANAYIYV 488
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 489 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 544
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 545 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVANLKVKDATQITQGPRSA-IEKKGS 600
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 601 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 652
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 653 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 708
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 709 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 765
Query: 475 PESEV 479
S V
Sbjct: 766 EPSPV 770
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 112/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W R+G E L + I N +R
Sbjct: 119 DISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGNNSNFA----QR 174
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + C+P + +P
Sbjct: 175 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPSAEP 233
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 234 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 293
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 294 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 347
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 348 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 399
Query: 279 P 279
P
Sbjct: 400 P 400
>gi|74009165|ref|XP_549364.2| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Canis lupus
familiaris]
Length = 1256
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 209/492 (42%), Gaps = 64/492 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A EG + C AP P W K
Sbjct: 406 ARNRHGLLLANAYIYVVQL-PAKILTP-DNETYMAVEGSTAYLLCKAFGAPVPSVQWLDK 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHG 179
+G + R + NG L I + +D+G Y C A N + + K + G
Sbjct: 464 EGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQG 523
Query: 180 P-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNIN 237
P S E+ K+T C A + L + W +G +L E ++
Sbjct: 524 PQSAIEKKGSKVTFT--------CQASFDPSLQHSITWRGDG-----RNLQEFGDSDKYF 570
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTS 294
I+ G L I + ++D G Y CV + + + + ++V G PG +++ + H ++
Sbjct: 571 IEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQ 630
Query: 295 ATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ W + PI Y I +A W S +GK + S
Sbjct: 631 VRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTT 676
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+
Sbjct: 677 LKLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITWK 736
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
PL NAP + Y++ WR + E + V ++ + + + YE+KVQA+
Sbjct: 737 PLRWMDWNAPQVQYRVQWRPQGTRGAWQEQI-----VSDPLLVVSNTSTFVPYEIKVQAV 791
Query: 469 NDVGPGPESEVV 480
N G GPE ++
Sbjct: 792 NSQGKGPEPQIT 803
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 185/488 (37%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P + W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LVLECIAEGFPTPSIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLNVAEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSDRHTYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
QLP KI + + T LL A+ G + ++ + E + D
Sbjct: 422 VQLPAKI-LTPDNETYMAVEGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDERFF 475
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
TN + D G Y C + ++ + V+ + G Q + K +
Sbjct: 476 PYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSA-IEKKGSK 534
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H W N+ E + D+Y + + +
Sbjct: 535 VTFTCQASFDPSLQH-----SITWRGDGRNLQEF---GDSDKYFIEDGRLVIHSVDYSDQ 586
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +AG EL E + +P P+ S K + +SW P E N
Sbjct: 587 GNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELS--DRHLLKQSQVRLSWRPA--EDHN 642
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 643 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YIHYTFRVTAINKYGPGE 699
Query: 475 --PESEVV 480
P SE V
Sbjct: 700 PSPASETV 707
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 116/300 (38%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAM 63
D++ CEA G P+V + W R+G E L + +T N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNSNFAQRFQGT 111
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 112 YRCFASNKLGTAMSHEIQLMAEGAPKWPKEMVKPVEVE----EGESVILPCHPPPSAEPL 167
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 168 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDL 227
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M + K RL+ S + + + L L C A + ++
Sbjct: 228 RVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPSIKWLRPS- 280
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ N + D GEY C+ ++++G V VE P
Sbjct: 281 ----GPMPADRVTYQNHN---KTLQLLNVAEEDDGEYRCLAENSLGSDRHTYYVTVEAAP 333
>gi|345807363|ref|XP_003435600.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Canis lupus
familiaris]
Length = 1247
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 209/492 (42%), Gaps = 64/492 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A EG + C AP P W K
Sbjct: 401 ARNRHGLLLANAYIYVVQL-PAKILTP-DNETYMAVEGSTAYLLCKAFGAPVPSVQWLDK 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHG 179
+G + R + NG L I + +D+G Y C A N + + K + G
Sbjct: 459 EGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQG 518
Query: 180 P-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNIN 237
P S E+ K+T C A + L + W +G +L E ++
Sbjct: 519 PQSAIEKKGSKVTFT--------CQASFDPSLQHSITWRGDG-----RNLQEFGDSDKYF 565
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTS 294
I+ G L I + ++D G Y CV + + + + ++V G PG +++ + H ++
Sbjct: 566 IEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQ 625
Query: 295 ATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ W + PI Y I +A W S +GK + S
Sbjct: 626 VRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTT 671
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+
Sbjct: 672 LKLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITWK 731
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
PL NAP + Y++ WR + E + V ++ + + + YE+KVQA+
Sbjct: 732 PLRWMDWNAPQVQYRVQWRPQGTRGAWQEQI-----VSDPLLVVSNTSTFVPYEIKVQAV 786
Query: 469 NDVGPGPESEVV 480
N G GPE ++
Sbjct: 787 NSQGKGPEPQIT 798
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 185/488 (37%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P + W R S +P DR Q++ T++ LN E D Y+
Sbjct: 255 LVLECIAEGFPTPSIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLNVAEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSDRHTYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 364 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
QLP KI + + T LL A+ G + ++ + E + D
Sbjct: 417 VQLPAKI-LTPDNETYMAVEGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDERFF 470
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
TN + D G Y C + ++ + V+ + G Q + K +
Sbjct: 471 PYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSA-IEKKGSK 529
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H W N+ E + D+Y + + +
Sbjct: 530 VTFTCQASFDPSLQH-----SITWRGDGRNLQEF---GDSDKYFIEDGRLVIHSVDYSDQ 581
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +AG EL E + +P P+ S K + +SW P E N
Sbjct: 582 GNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELS--DRHLLKQSQVRLSWRPA--EDHN 637
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 638 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YIHYTFRVTAINKYGPGE 694
Query: 475 --PESEVV 480
P SE V
Sbjct: 695 PSPASETV 702
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 116/300 (38%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAM 63
D++ CEA G P+V + W R+G E L + +T N +R
Sbjct: 47 DISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNSNFAQRFQGT 106
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 107 YRCFASNKLGTAMSHEIQLMAEGAPKWPKEMVKPVEVE----EGESVILPCHPPPSAEPL 162
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 163 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDL 222
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M + K RL+ S + + + L L C A + ++
Sbjct: 223 RVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPSIKWLRPS- 275
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ N + D GEY C+ ++++G V VE P
Sbjct: 276 ----GPMPADRVTYQNHN---KTLQLLNVAEEDDGEYRCLAENSLGSDRHTYYVTVEAAP 328
>gi|345807361|ref|XP_003435599.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Canis lupus
familiaris]
Length = 1252
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 209/492 (42%), Gaps = 64/492 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A EG + C AP P W K
Sbjct: 406 ARNRHGLLLANAYIYVVQL-PAKILTP-DNETYMAVEGSTAYLLCKAFGAPVPSVQWLDK 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHG 179
+G + R + NG L I + +D+G Y C A N + + K + G
Sbjct: 464 EGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQG 523
Query: 180 P-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNIN 237
P S E+ K+T C A + L + W +G +L E ++
Sbjct: 524 PQSAIEKKGSKVTFT--------CQASFDPSLQHSITWRGDG-----RNLQEFGDSDKYF 570
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTS 294
I+ G L I + ++D G Y CV + + + + ++V G PG +++ + H ++
Sbjct: 571 IEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELSDRHLLKQSQ 630
Query: 295 ATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ W + PI Y I +A W S +GK + S
Sbjct: 631 VRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTT 676
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+
Sbjct: 677 LKLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITWK 736
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
PL NAP + Y++ WR + E + V ++ + + + YE+KVQA+
Sbjct: 737 PLRWMDWNAPQVQYRVQWRPQGTRGAWQEQI-----VSDPLLVVSNTSTFVPYEIKVQAV 791
Query: 469 NDVGPGPESEVV 480
N G GPE ++
Sbjct: 792 NSQGKGPEPQIT 803
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 185/488 (37%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P + W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LVLECIAEGFPTPSIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLNVAEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSDRHTYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
QLP KI + + T LL A+ G + ++ + E + D
Sbjct: 422 VQLPAKI-LTPDNETYMAVEGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDERFF 475
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
TN + D G Y C + ++ + V+ + G Q + K +
Sbjct: 476 PYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPQSA-IEKKGSK 534
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H W N+ E + D+Y + + +
Sbjct: 535 VTFTCQASFDPSLQH-----SITWRGDGRNLQEF---GDSDKYFIEDGRLVIHSVDYSDQ 586
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +AG EL E + +P P+ S K + +SW P E N
Sbjct: 587 GNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELS--DRHLLKQSQVRLSWRPA--EDHN 642
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 643 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YIHYTFRVTAINKYGPGE 699
Query: 475 --PESEVV 480
P SE V
Sbjct: 700 PSPASETV 707
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 116/300 (38%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAM 63
D++ CEA G P+V + W R+G E L + +T N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNSNFAQRFQGT 111
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 112 YRCFASNKLGTAMSHEIQLMAEGAPKWPKEMVKPVEVE----EGESVILPCHPPPSAEPL 167
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 168 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDL 227
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M + K RL+ S + + + L L C A + ++
Sbjct: 228 RVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPSIKWLRPS- 280
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ N + D GEY C+ ++++G V VE P
Sbjct: 281 ----GPMPADRVTYQNHN---KTLQLLNVAEEDDGEYRCLAENSLGSDRHTYYVTVEAAP 333
>gi|345323882|ref|XP_001511552.2| PREDICTED: contactin-6 [Ornithorhynchus anatinus]
Length = 569
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 7/242 (2%)
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P ++ + ++ L C + + ++V + W+ NG I ++ E G L+ I
Sbjct: 47 PSQMDVTVGESIVLPCQVYHDPSVEVVFTWSFNGDMIDFQRGVDHFERIGGESVGDLM-I 105
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+YEC+V++T+ +S +VIV GPPG P V+V T++ + W G N
Sbjct: 106 RNIQLGHSGKYECLVQTTIDSLSATASVIVRGPPGPPDDVRVEHFSNTTSQLHWRPGLDN 165
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+ Y I RT ++ W VS + G+ ++ L PW YEF+V+A N
Sbjct: 166 NSPVQIYTIQTRTPFSIGWQAVS-----TVPEILNGKTYSATVVGLNPWIEYEFRVVAAN 220
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
+G GEPS PS T A P P+ I GGGG +L I+WE +P E QN Y I
Sbjct: 221 SVGIGEPSQPSQLLRTKASVPVAVPTNISGGGGSRSELIITWESIPEELQNGEGFGYTIM 280
Query: 426 WR 427
+R
Sbjct: 281 FR 282
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 157/425 (36%), Gaps = 60/425 (14%)
Query: 87 KPSFKKR------PLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGNIIGSGGRRKI 138
K + KKR P + + GE ++ + C P + F W +G++I
Sbjct: 34 KGTLKKRTVITIPPSQMDVTVGE--SIVLPCQVYHDPSVEVVFTWSFNGDMIDFQRGVDH 91
Query: 139 FEN------GNLLISPVSRDDSGIYSC-TATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 191
FE G+L+I + SG Y C T + + + +++ GP PP
Sbjct: 92 FERIGGESVGDLMIRNIQLGHSGKYECLVQTTIDSLSATAS--VIVRGPPG----PPDDV 145
Query: 192 IAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
H L R + + I T IG ++ + P I ++G T
Sbjct: 146 RVEHFSNTTSQLHWRPGLDNNSPVQIYTIQTRTPFSIGWQAVSTV--PEI-LNGKTYSAT 202
Query: 247 NASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
EYE V ++VG + TK +V V P + GG ++
Sbjct: 203 VVGLNPWIEYEFRVVAANSVGIGEPSQPSQLLRTKASVPVAVPTNISGGGG----SRSEL 258
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NG Y I+ R + TW V E +YT R E+ +
Sbjct: 259 IITWESIPEELQNGEGF-GYTIMFRPLGSITW--TKAIVASVEASKYTYRNES-----IT 310
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P S +E KV N G G S+ S Y+ D+P APS + ++ +SW +
Sbjct: 311 PLSPFEVKVGVYNNEGEGALSTASIVYSG-EDEPQLAPSGVSAQSFSASEMEVSWSAIAW 369
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ + Y++ + + E + ++ GN I I T Y V+A N G
Sbjct: 370 SRHTGRVLGYEVSYWTDDSKETIAGKVRVSGN--ITTKNITGLKANTVYFATVRAHNTAG 427
Query: 473 PGPES 477
GP S
Sbjct: 428 TGPSS 432
>gi|260791168|ref|XP_002590612.1| hypothetical protein BRAFLDRAFT_83746 [Branchiostoma floridae]
gi|229275807|gb|EEN46623.1| hypothetical protein BRAFLDRAFT_83746 [Branchiostoma floridae]
Length = 2710
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 214/501 (42%), Gaps = 46/501 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T +CEA G + YSW+ + + + D +Y + + LT++ ++ D Y+C
Sbjct: 298 VTMSCEATGSEPLVYSWYFGRDKI------VTDNIKYVVSTDKLTVKNMD-LNDKGSYRC 350
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ +A++R+L+ KP P+ S+ EG +T+ E P P W K
Sbjct: 351 IITNEQGA--GTAEIRLLS-KPPNIVIPI-SQQNGMEGSTITMTVTFEGLPVPTMEWIKQ 406
Query: 127 GNIIGSGG---------------------RRKIFENGNLLISPVSRDDSGIYSCTATNVH 165
G +I + R + + G+L+I +S +D G YS NV
Sbjct: 407 GEVIVTRTPEGVVTKTSSRYSILCIIIPVRYNVTKKGHLVIRNLSPEDGGSYSFRIQNVL 466
Query: 166 GMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
G ++ GRL + + PK + + + C + LL+ W +G +I
Sbjct: 467 GSVDTAGRLYIAQKSRIVQGRGPKDVNMEQGSTTTIPCEGQIDTLLESVNSWFVDGRKID 526
Query: 225 NM--DLNELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
+ N P G L I NA+ G Y C + ++V + + V ++G
Sbjct: 527 FVKESFNYKRGPK-----GELIIKNANVMMHDGVYTCALDTSVDEQTATARVRIKGVSEA 581
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV---SEHVIGKEVDR 338
P GV+ V +AT+++T TNG Y + A+T ++ +F ++ G
Sbjct: 582 PVGVKFENVGSNTATLRFTQANTNGDSCKEYVVEAQTEFDDIFFTDRLWTQVWRGSPNSL 641
Query: 339 YTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 396
GR + + N+ L P++ Y F+V+ N G GEPS P+ + T P +AP ++G G
Sbjct: 642 RNGRGGSKLLNLNNLKPFTEYSFRVMCMNLYGMGEPSWPTERNRTLPGAPPRAPGKLGYG 701
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
G GD+ +SWEPL + Y++ +R++ + + P
Sbjct: 702 NGMAGDVLMSWEPLQESDWGDITVGYRVRYRRQGTGDKYRVVYIDNPEAAAYAHTQPPAP 761
Query: 457 YYTEYEVKVQAINDVGPGPES 477
YE K+ A N+ GPE+
Sbjct: 762 VNVPYECKIAAYNNYSVGPEA 782
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 209/495 (42%), Gaps = 45/495 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T +CEA G + YSW+ + + + D +Y + + LT++ ++ D Y+C
Sbjct: 1614 VTMSCEATGSEPLVYSWYFKRDKI------VTDNIKYVVSTDKLTVKNMD-LGDRGGYRC 1666
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
NQ SA++++L P+ P+ S+ EG +T+ P P W K
Sbjct: 1667 IVSNQQGA--GSAEVKLLAKGPNIII-PI-SQQNGMEGSTITMTVRFAGLPVPTMEWIKQ 1722
Query: 127 GNIIGS----------GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
G +I + R + G L+I ++ DD+G YS NV ++ G L V
Sbjct: 1723 GEVIATRTPEGVVETTSPRYDVTRQGYLIIKNLTPDDAGSYSFRIQNVLDSKDTAGILYV 1782
Query: 177 ------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM--DL 228
+ GP P + + + C + LL+ W +G +I +
Sbjct: 1783 AKQSRIIRGPG-----PTDVNMEQGGTTIIPCEGQIDSLLESVNTWFVDGRKIDFVKESF 1837
Query: 229 NELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
N P G L I NA+ G Y C + +T + + V ++G P GV+
Sbjct: 1838 NYKRGPK-----GELIIKNANVMMHDGVYTCALATTADEQTATGRVRIKGVSEAPVGVKF 1892
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV---SEHVIGKEVDRYTGRKE 344
V +AT+++T TNG Y + A+T ++ +F ++ G + R
Sbjct: 1893 ENVGSNTATLRFTQANTNGDSCKEYVVEAQTEFDDIFFTDRLWTQVWRGSPSALRSSRGG 1952
Query: 345 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
A + N+ L P++ Y F+V+ N G GEPS P+ + T P +AP ++G G G GD
Sbjct: 1953 AKLLNLNNLKPYTEYSFRVMCLNTYGMGEPSWPTEKNRTLPGAPPRAPRKLGYGNGMAGD 2012
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+ +SWEPL + Y++ +R++ + + P YE
Sbjct: 2013 VLMSWEPLEESDWGDYTVGYRVRYRRQGTGDKYRVVYIDNPEAAAYAHTQPPAPVNVPYE 2072
Query: 463 VKVQAINDVGPGPES 477
K+ A N+ GPE+
Sbjct: 2073 CKIAAYNNYSVGPEA 2087
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 118/334 (35%), Gaps = 75/334 (22%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
N A+LT C A G P V YSW ++G+ +++++ D+Y I L I D
Sbjct: 59 NYANLT--CRAKGRPYVHYSWLKDGKEIDAKS------DKYAIAGGYLVIYNPVYPDDQG 110
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKF 121
YQC A N S L +F K P S EG + C P+A P +
Sbjct: 111 TYQCIAYNPRGADVSMPAFFALAHVGTFDKTP-RSPVTVTEGRGFKLECGAPDAFPALHY 169
Query: 122 VWKKD--GNIIGSGGRRKI-FENGN----------------------------------- 143
W K N I RR I +NG+
Sbjct: 170 GWYKGHIANRIIPNERRYISLKNGDLYFKYAIVNDAGEYSPESNIKWRRLDRPAREGGVE 229
Query: 144 ---------------LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP- 187
L+I +S D GI+ CTA+N G + + V PS ++P
Sbjct: 230 IEFPSKARFNYLSHALIIPEISEADGGIFECTASNRKGSVSHEALIEVRSSPS--PKVPF 287
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
K + ++ + C A E L ++ + + + N+ + L + N
Sbjct: 288 SKKPLVIGGSVTMSCEATGSEPLVYSWYFGRDKIVTDNI--------KYVVSTDKLTVKN 339
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
D G Y C++ + G T ++ PP +
Sbjct: 340 MDLNDKGSYRCIITNEQGA-GTAEIRLLSKPPNI 372
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 7/164 (4%)
Query: 96 ESETYAGEGGN-VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDD 153
+ E EG N + C + P + W KDG I + + G L+I +PV DD
Sbjct: 49 DREKALSEGINYANLTCRAKGRPYVHYSWLKDGKEIDAKSDKYAIAGGYLVIYNPVYPDD 108
Query: 154 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDV 212
G Y C A N G D S L +++ P +T+ R +L C A + +
Sbjct: 109 QGTYQCIAYNPRGADVSMPAFFALAHVGTFDKTPRSPVTVTEGRGFKLECGA-PDAFPAL 167
Query: 213 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
Y W + G + NE I++ G L A DAGEY
Sbjct: 168 HYGW-YKGHIANRIIPNERRY--ISLKNGDLYFKYAIVNDAGEY 208
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 96/248 (38%), Gaps = 43/248 (17%)
Query: 60 DPAMYQCRAKNQLKTRY-------SSAQLRVLT---LKPSFKKRP-----LESETYAGEG 104
D Y+C +NQ +T + SS + V+ L P R +T EG
Sbjct: 1453 DAGNYRCFVQNQQETDFAGDLQNRSSPIITVIVNRDLNPPISDREPVIMLAPQDTTVIEG 1512
Query: 105 G-NVTIFCNPEAAPKPKFVWKKDGNIIGSGG--------RRKIFENGNLLISPVSRDDSG 155
+ + C +A P+ WK+ GG R + + L+I +S D G
Sbjct: 1513 YLSAELECFDDAYPESNIQWKRLDRPAREGGVEIAFPSKARFNYHSHALIIPLMSAADGG 1572
Query: 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR-----NLQLRCSAHTEELL 210
I+ CTA+N G + ++ V PS PK+ A+ ++ + C A E L
Sbjct: 1573 IFQCTASNRKGSVSHEAQIEVRSVPS------PKVPRASKALVFGGSVTMSCEATGSEPL 1626
Query: 211 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
++ + + + N+ + L + N D G Y C+V + G S +
Sbjct: 1627 VYSWYFKRDKIVTDNI--------KYVVSTDKLTVKNMDLGDRGGYRCIVSNQQGAGSAE 1678
Query: 271 TTVIVEGP 278
++ +GP
Sbjct: 1679 VKLLAKGP 1686
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGN------VTIFCNPEA 115
+++ Q + Y+ + R PS + P + Y E + C +A
Sbjct: 1292 SLFIAEVNTQNQGCYTCEEWRGRPNDPSIYEHPQDPTVYDKEKAKSEGINYANLTCKAKA 1351
Query: 116 APKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
P + W KDG I + I ++ +P DD G+Y C A N G D S
Sbjct: 1352 RPWVNYAWLKDGKEIQISDKYTIAGGYLVIYNPTYPDDEGLYQCIAYNPRGADVSTPAWF 1411
Query: 176 VLHGPSYY 183
++ P YY
Sbjct: 1412 LM-TPLYY 1418
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 104/295 (35%), Gaps = 56/295 (18%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
N A+LT C+A P V Y+W ++G+ ++ D+Y I L I D
Sbjct: 1341 NYANLT--CKAKARPWVNYAWLKDGK-------EIQISDKYTIAGGYLVIYNPTYPDDEG 1391
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC A N S+ ++T PL Y G N
Sbjct: 1392 LYQCIAYNPRGADVSTPAWFLMT--------PLYYGWYKGHVAN---------------- 1427
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD-----ESKGRLIV- 176
II + R +NG+L +D+G Y C N D +++ I+
Sbjct: 1428 -----RIIPNERRYISHKNGDLYFKYAVVNDAGNYRCFVQNQQETDFAGDLQNRSSPIIT 1482
Query: 177 ------LHGPSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L+ P + L P+ T I + + +L C ++ + R G
Sbjct: 1483 VIVNRDLNPPISDREPVIMLAPQDTTVIEGYLSAELECFDDAYPESNIQWKRLDRPAREG 1542
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+++ N L I S AD G ++C + G +S + + V P
Sbjct: 1543 GVEIAFPSKARFNYHSHALIIPLMSAADGGIFQCTASNRKGSVSHEAQIEVRSVP 1597
>gi|403306865|ref|XP_003943940.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1248
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 205/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEITWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A N+ ++A + V+ L K +++TY A G + C AP P W +
Sbjct: 406 AGNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAAN----DQNNVTIVANLQIKDATQ 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 520 ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + V ++H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVSDLHLLKQSQVRLS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 741 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNRQG 795
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 796 KGPEPQVT 803
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 187/485 (38%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLNVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHDYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C + ++ + ++ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRST-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P+ A S + K + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVSDL--HLLKQSQVRLSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 PESEV 479
S V
Sbjct: 699 EPSPV 703
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 112/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W R+G + L + I N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSFTITGNNSNF----AQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + C+P + +P
Sbjct: 108 FQGVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N L++ N D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|403306869|ref|XP_003943942.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1243
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 205/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 349 CQVQGRPQPEITWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A N+ ++A + V+ L K +++TY A G + C AP P W +
Sbjct: 401 AGNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDE 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 459 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAAN----DQNNVTIVANLQIKDATQ 514
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 515 ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 569
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + V ++H ++ +
Sbjct: 570 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVSDLHLLKQSQVRLS 629
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 630 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 675
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 676 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRW 735
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 736 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNRQG 790
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 791 KGPEPQVT 798
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 187/485 (38%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 255 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLNVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSARHDYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 364 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 417 VQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 472
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C + ++ + ++ + G + + K +
Sbjct: 473 AN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRST-IEKKGS 528
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 529 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 580
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P+ A S + K + +SW P E
Sbjct: 581 QGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVSDL--HLLKQSQVRLSWSPA--EDH 636
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 637 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 693
Query: 475 PESEV 479
S V
Sbjct: 694 EPSPV 698
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 112/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W R+G + L + I N +R
Sbjct: 47 DISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSFTITGNNSNFA----QR 102
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + C+P + +P
Sbjct: 103 FQGVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPSAEP 161
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 162 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 221
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 222 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 275
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N L++ N D GEY C+ ++++G V VE
Sbjct: 276 -----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTVEAA 327
Query: 279 P 279
P
Sbjct: 328 P 328
>gi|38614294|gb|AAH60237.1| Sdk1 protein, partial [Mus musculus]
Length = 2159
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 199/478 (41%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ L+ L++ + L I+ L+PE D ++QC A N
Sbjct: 356 CRAMGVPLPTLQWYKDAVPLSK----LQNPRYKVLPSGGLHIQKLSPE-DSGIFQCFASN 410
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F +RP++ T +G + C APKP WK+ +I+
Sbjct: 411 EGGEVQTHTYLDVTNIAPAFTQRPVD--TTVTDGMTAVLRCEVSGAPKPAITWKRGNHIL 468
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N + L V + S
Sbjct: 469 ASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPP 528
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I L C A + + Y+W + V I + + + DG L+ I+
Sbjct: 529 EDRVVIKG-TTATLCCGATHDPRTSLRYVWKKDNVVITASSSSRIV---VEKDGSLV-IS 583
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + S T+ W
Sbjct: 584 QTWSGDIGDYTCEIISEGGSDSRTARLEVIELPHPPQNLLASLSPARSHSVTLSWVRPFD 643
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y + N NS W V +G E+ T + L P TY+F+V A
Sbjct: 644 GNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 694
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 695 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 754
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E Q + + + + +T+YE++V A N G G S VT
Sbjct: 755 RYRLAGLPGEHQQRNIS---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 809
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W RN +SE + +Y I +++ L D Y+C
Sbjct: 70 LVLTCLAEGSWPLEFKWIRN----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 117
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ +A + I + P+P+ W
Sbjct: 118 VVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIV----SCPQPQVTW 173
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I V
Sbjct: 174 FREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSVARDT 233
Query: 181 SYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 234 GTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL--------- 284
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L ITN + AD G Y C
Sbjct: 285 TSGLHSYGRRLTITNPTSADTGMYVC 310
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1847 AEGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAK 1900
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1901 DIPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1952
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 21/158 (13%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1433 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1490
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1491 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1540
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 438
+ I W+P E N Y+I++R E +SET
Sbjct: 1541 SSVLIQWQPPRDESLNGLLQGYRIYYR-----ELESET 1573
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 324
T+ ++ PG P G H TS+ IQW D + NG + Y+I R + T
Sbjct: 1516 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELESETG 1574
Query: 325 FN------VSEHVIGKEVDRYTGRKEASIENVLVPWST--------YEFKVIAGNELGYG 370
+ S + E+ + K + + L + YE + A N +G
Sbjct: 1575 MSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGES 1634
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
S P + A P AP + L ++W+P P E QN YK+++ +
Sbjct: 1635 PASVPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEA- 1692
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
D+ ++E +K + VV+I +T+Y + + A N G GP+S+
Sbjct: 1693 DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSD 1739
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1003 VTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 1058
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1059 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSS 1111
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 433
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 1112 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 1171
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ + + + I +TEYE+++QA N +G GP SE+V
Sbjct: 1172 ALAQVVSDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELV 1215
>gi|34101310|gb|AAQ57662.1| sidekick 1 [Mus musculus]
gi|187951057|gb|AAI38454.1| Sidekick homolog 1 (chicken) [Mus musculus]
Length = 1933
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 199/478 (41%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ L+ L++ + L I+ L+PE D ++QC A N
Sbjct: 130 CRAMGVPLPTLQWYKDAVPLSK----LQNPRYKVLPSGGLHIQKLSPE-DSGIFQCFASN 184
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F +RP++ T +G + C APKP WK+ +I+
Sbjct: 185 EGGEVQTHTYLDVTNIAPAFTQRPVD--TTVTDGMTAVLRCEVSGAPKPAITWKRGNHIL 242
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N + L V + S
Sbjct: 243 ASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPP 302
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I L C A + + Y+W + V I + + + DG L+ I+
Sbjct: 303 EDRVVIKG-TTATLCCGATHDPRTSLRYVWKKDNVVITASSSSRIV---VEKDGSLV-IS 357
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + S T+ W
Sbjct: 358 QTWSGDIGDYTCEIISEGGSDSRTARLEVIELPHPPQNLLASLSPARSHSVTLSWVRPFD 417
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y + N NS W V +G E+ T + L P TY+F+V A
Sbjct: 418 GNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 468
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 469 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 528
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E Q + + + + +T+YE++V A N G G S VT
Sbjct: 529 RYRLAGLPGEHQQRNIS---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 583
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1621 AEGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAK 1674
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1675 DIPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1726
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 21/158 (13%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1207 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1264
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1265 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1314
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 438
+ I W+P E N Y+I++R E +SET
Sbjct: 1315 SSVLIQWQPPRDESLNGLLQGYRIYYR-----ELESET 1347
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 324
T+ ++ PG P G H TS+ IQW D + NG + Y+I R + T
Sbjct: 1290 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELESETG 1348
Query: 325 FN------VSEHVIGKEVDRYTGRKEASIENVLVPWST--------YEFKVIAGNELGYG 370
+ S + E+ + K + + L + YE + A N +G
Sbjct: 1349 MSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGES 1408
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
S P + A P AP + L ++W+P P E QN YK+++ +
Sbjct: 1409 PASVPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEA- 1466
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
D+ ++E +K + VV+I +T+Y + + A N G GP+S+
Sbjct: 1467 DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSD 1513
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 777 VTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 832
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 833 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSS 885
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 433
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 886 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 945
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ + + + I +TEYE+++QA N +G GP SE+V
Sbjct: 946 ALAQVVSDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELV 989
>gi|390340326|ref|XP_784933.3| PREDICTED: neurofascin-like isoform 4 [Strongylocentrotus
purpuratus]
gi|390340328|ref|XP_003725216.1| PREDICTED: neurofascin-like isoform 1 [Strongylocentrotus
purpuratus]
gi|390340330|ref|XP_003725217.1| PREDICTED: neurofascin-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 1257
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 216/498 (43%), Gaps = 51/498 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPER-DPAMYQCR 67
C + GVP W NG+ ++ + + N + TI N + D ++QC
Sbjct: 337 CRSEGVPAPAVDWLVNGQPWADFESNIDTERWTVVTGNPQLATISISNLQTTDSNVFQCI 396
Query: 68 AKNQLKTRYSSAQLRVLTLK---PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
A N+ K +S L V+++ PSF P+ + E + C+ E P P W
Sbjct: 397 ATNKYKEELTSVVLNVVSIPARIPSFT--PVTRKLSVVEDSSAAFTCHVEGRPTPTITWT 454
Query: 125 KDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATN-VHGMD-ESKGRL-IVLHGP 180
G+++ +G + I E G+++I+ DSG Y CTA N + G D E+ G + + G
Sbjct: 455 FKGSVLTNGDKYTIDELAGSIVINNALEVDSGAYECTAENSIDGQDYEATGSATLTVLGK 514
Query: 181 SYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINI 238
+ P +T+ +C + EL W +G R+ N D
Sbjct: 515 TIITLPPADLTVREDTTATFQCEITYDHELDKPETYWMKDGQRLEANQD----------- 563
Query: 239 DGGLLEITNASFADAGEYECVVKST-------VGKISTKTTVIVEGPPGLPGGVQV-VEV 290
L I NA F+++G Y C V++T V ++ ++V+G PG P +Q+ +
Sbjct: 564 --NSLRIDNAMFSNSGTYTCFVETTLDESTDTVHSVNASAQLVVKGHPGPPQNLQLRAKE 621
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
+ + + W G N PI +Y I T W + W + + RY RK ++
Sbjct: 622 QEFAMDLFWEPGNDNNAPIQYYIIQYDTKWADMHWQFQANETADDDTSRY--RKVLHLQ- 678
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
P+ Y+F+VIA NE+G EPS+ +P + P + P + G G + + I W+
Sbjct: 679 ---PFVDYQFRVIAVNEIGRSEPSAGVAPTVDPQVAPPSKNPIEVSGSGTRPESMVIRWQ 735
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFY------YTEY 461
+ + +Y++ +R + +E F +T+ N I F Y EY
Sbjct: 736 SIHPFYYGGDDFHYEVAYRPRMSSEPFVKDTVYPE-NTDANPTGIIQNFIVNARKPYEEY 794
Query: 462 EVKVQAINDVGPGPESEV 479
E V+++N GPGPE E+
Sbjct: 795 EFSVRSMNSGGPGPEPEI 812
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 111/297 (37%), Gaps = 27/297 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D + LT TC A G+P+ +Y W+++G L + +++ DR + L I L D
Sbjct: 36 DTRLPLTLTCRATGIPEPSYYWYKDGALFD-----VDNNDRASLDGGNLVIESLTTADD- 89
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-----PEAA 116
YQC A N+L T S + L F+ E+ +G + + C P
Sbjct: 90 GQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPET-IQVDQGRPLKLRCGGSPGVPNGN 148
Query: 117 PKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA-TNVHGMDESKG 172
P P W I R GNL+ S V D+ Y C A NV G +
Sbjct: 149 PAPLIYWTDAAAKPTPITYNARINQDPEGNLVFSNVIASDAKGYYCQAINNVVGSSQRTP 208
Query: 173 RLIVLHGPSYYEQLPP------KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
++ ++ LPP IT A + +R + + Y + G
Sbjct: 209 KVTLM-----VSDLPPVESGASLITKPAANEIAIRTQLFKLKCIAYGYPTPVITWKRGEE 263
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283
L +I G L I+ +D G Y CV +T G T V VE P P
Sbjct: 264 QLQSGGRVSIEESGQELVISTVENSDKGTYTCVASNTGGDDEFSTVVTVESAPYFPA 320
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 101/271 (37%), Gaps = 37/271 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSE-TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C A+G P +W R E L S + +E+ + + V D Y C A
Sbjct: 246 CIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTV-------ENSDKGTYTCVAS 298
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S + V + P F P S+ G G +V I C E P P W +G
Sbjct: 299 NTGGDDEFSTVVTVES-APYFPAPP--SDETKGPGESVDIECRSEGVPAPAVDWLVNGQP 355
Query: 130 IGS-----GGRRKIFENGN-----LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
R GN + IS + DS ++ C ATN + + + L V+
Sbjct: 356 WADFESNIDTERWTVVTGNPQLATISISNLQTTDSNVFQCIATNKYKEELTSVVLNVVSI 415
Query: 180 PSYYEQLPP---KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD---LNELET 233
P+ P K+++ + C H E WT G + N D ++EL
Sbjct: 416 PARIPSFTPVTRKLSVVEDSSAAFTC--HVEGRPTPTITWTFKGSVLTNGDKYTIDEL-- 471
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTV 264
G + I NA D+G YEC ++++
Sbjct: 472 ------AGSIVINNALEVDSGAYECTAENSI 496
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGY 369
HY++ R +S F V + V + D TG + I N P+ YEF V + N G
Sbjct: 748 HYEVAYRPRMSSEPF-VKDTVYPENTDANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGP 806
Query: 370 GEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYY 422
G P P+ + + P +PS + +++++WEP+ E N N+YY
Sbjct: 807 G----PEPEIHYGFSGEAAPGASPSGVTVEAISANEVNVTWEPIDPEDANGKLGGYNVYY 862
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ D + ++ GN+ A T YE+ V+A + G GP S+VV +
Sbjct: 863 NVKIASGQDKQMCVKSPCVVGNLQAA----------TTYEITVKAFTNAGEGPASDVVEV 912
Query: 483 WHD 485
D
Sbjct: 913 VTD 915
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 35/205 (17%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCR 67
+TC G P T +W G +L + D+Y I + +I N E D Y+C
Sbjct: 439 FTCHVEGRPTPTITWTFKGSVLT-------NGDKYTIDELAGSIVINNALEVDSGAYECT 491
Query: 68 AKNQLKTR----YSSAQLRVL-----TLKPS-FKKRPLESETYAGEGGNVTIFCNPEAAP 117
A+N + + SA L VL TL P+ R + T+ E
Sbjct: 492 AENSIDGQDYEATGSATLTVLGKTIITLPPADLTVREDTTATFQCE------ITYDHELD 545
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
KP+ W KDG R + ++ +L I +SG Y+C +DES +
Sbjct: 546 KPETYWMKDGQ------RLEANQDNSLRIDNAMFSNSGTYTCFVETT--LDESTD---TV 594
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRC 202
H + QL K +NLQLR
Sbjct: 595 HSVNASAQLVVKGHPGPPQNLQLRA 619
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 45/187 (24%)
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
PS EQ P I L L C A + + +Y W +G + ++D N+ ++D
Sbjct: 24 PSIVEQ-PESINGDTRLPLTLTCRATG--IPEPSYYWYKDGA-LFDVDNND----RASLD 75
Query: 240 GGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVE------------------ 276
GG L I + + AD G+Y+C + +G KI T + +
Sbjct: 76 GGNLVIESLTTADDGQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPLK 135
Query: 277 ----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 332
G PG+P G + I WTD A PIT+ AR N + V +VI
Sbjct: 136 LRCGGSPGVPNG-------NPAPLIYWTDAAAKPTPITYN---ARINQDPEGNLVFSNVI 185
Query: 333 GKEVDRY 339
+ Y
Sbjct: 186 ASDAKGY 192
>gi|403306867|ref|XP_003943941.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1252
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 205/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEITWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A N+ ++A + V+ L K +++TY A G + C AP P W +
Sbjct: 406 AGNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAAN----DQNNVTIVANLQIKDATQ 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 520 ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + V ++H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVSDLHLLKQSQVRLS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 741 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNRQG 795
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 796 KGPEPQVT 803
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 187/485 (38%), Gaps = 53/485 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLNVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHDYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C + ++ + ++ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRST-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P+ A S + K + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVSDL--HLLKQSQVRLSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 PESEV 479
S V
Sbjct: 699 EPSPV 703
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 112/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG------ELLNSETLPLEDQDRYFIQDNVLTIRYLNPER 59
D++ CEA G P+V + W R+G + L + I N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFKPKDELGVTVYQAPHSGSFTITGNNSNF----AQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + C+P + +P
Sbjct: 108 FQGVYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N L++ N D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>gi|164518930|ref|NP_808547.3| protein sidekick-1 [Mus musculus]
gi|90183173|sp|Q3UH53.1|SDK1_MOUSE RecName: Full=Protein sidekick-1; Flags: Precursor
gi|74188487|dbj|BAE28004.1| unnamed protein product [Mus musculus]
Length = 2193
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 199/478 (41%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ L+ L++ + L I+ L+PE D ++QC A N
Sbjct: 390 CRAMGVPLPTLQWYKDAVPLSK----LQNPRYKVLPSGGLHIQKLSPE-DSGIFQCFASN 444
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F +RP++ T +G + C APKP WK+ +I+
Sbjct: 445 EGGEVQTHTYLDVTNIAPAFTQRPVD--TTVTDGMTAVLRCEVSGAPKPAITWKRGNHIL 502
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N + L V + S
Sbjct: 503 ASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPP 562
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I L C A + + Y+W + V I + + + DG L+ I+
Sbjct: 563 EDRVVIKG-TTATLCCGATHDPRTSLRYVWKKDNVVITASSSSRIV---VEKDGSLV-IS 617
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + S T+ W
Sbjct: 618 QTWSGDIGDYTCEIISEGGSDSRTARLEVIELPHPPQNLLASLSPARSHSVTLSWVRPFD 677
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y + N NS W V +G E+ T + L P TY+F+V A
Sbjct: 678 GNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 728
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 729 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 788
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E Q + + + + +T+YE++V A N G G S VT
Sbjct: 789 RYRLAGLPGEHQQRNIS---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 843
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W RN +SE + +Y I +++ L D Y+C
Sbjct: 104 LVLTCLAEGSWPLEFKWIRN----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 151
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ +A + I + P+P+ W
Sbjct: 152 VVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIV----SCPQPQVTW 207
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I V
Sbjct: 208 FREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSVARDT 267
Query: 181 SYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 268 GTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL--------- 318
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L ITN + AD G Y C
Sbjct: 319 TSGLHSYGRRLTITNPTSADTGMYVC 344
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1881 AEGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAK 1934
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1935 DIPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1986
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 21/158 (13%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1467 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1524
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1525 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1574
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 438
+ I W+P E N Y+I++R E +SET
Sbjct: 1575 SSVLIQWQPPRDESLNGLLQGYRIYYR-----ELESET 1607
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 324
T+ ++ PG P G H TS+ IQW D + NG + Y+I R + T
Sbjct: 1550 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELESETG 1608
Query: 325 FN------VSEHVIGKEVDRYTGRKEASIENVLVPWST--------YEFKVIAGNELGYG 370
+ S + E+ + K + + L + YE + A N +G
Sbjct: 1609 MSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGES 1668
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
S P + A P AP + L ++W+P P E QN YK+++ +
Sbjct: 1669 PASVPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEA- 1726
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
D+ ++E +K + VV+I +T+Y + + A N G GP+S+
Sbjct: 1727 DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSD 1773
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1037 VTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 1092
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1093 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSS 1145
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 433
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 1146 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 1205
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ + + + I +TEYE+++QA N +G GP SE+V
Sbjct: 1206 ALAQVVSDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELV 1249
>gi|426372196|ref|XP_004053014.1| PREDICTED: contactin-1, partial [Gorilla gorilla gorilla]
Length = 561
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 116/223 (52%), Gaps = 17/223 (7%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ P I N ++C+A + LD+ ++W+ NG I
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVI 547
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 118/322 (36%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W N ++ + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS------DRYSMVGGNLVINNPDKQKDAGI 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 112 YYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D +R +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRKVL 279
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 280 EPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCVAT-GKPI 359
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 28/274 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
++T C A G P W + E P+ VL I + E D +Y+
Sbjct: 258 NVTLECFALGNPVPDIRWRKVLE-------PMPSTAEISTSGAVLKIFNIQLE-DEGIYE 309
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N A++ V P + + ++E G ++ C P P W K
Sbjct: 310 CEAENIRGKDKHQARIYVQAF-PEWVEHINDTEV--DIGSDLYWPCVATGKPIPTIRWLK 366
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+G + G L + V+ +++G+Y C A N +G + L +L +E
Sbjct: 367 NG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEM 417
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLE 244
P K I A + ++ + + W+ + N + I I + G LE
Sbjct: 418 NPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN-------SSRILIWEDGSLE 470
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I N + D G Y C ++ GK ++ T+++ P
Sbjct: 471 INNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|390340332|ref|XP_003725218.1| PREDICTED: neurofascin-like isoform 3 [Strongylocentrotus
purpuratus]
Length = 1269
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 216/498 (43%), Gaps = 51/498 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN--VLTIRYLNPER-DPAMYQCR 67
C + GVP W NG+ ++ + + N + TI N + D ++QC
Sbjct: 349 CRSEGVPAPAVDWLVNGQPWADFESNIDTERWTVVTGNPQLATISISNLQTTDSNVFQCI 408
Query: 68 AKNQLKTRYSSAQLRVLTLK---PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
A N+ K +S L V+++ PSF P+ + E + C+ E P P W
Sbjct: 409 ATNKYKEELTSVVLNVVSIPARIPSFT--PVTRKLSVVEDSSAAFTCHVEGRPTPTITWT 466
Query: 125 KDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATN-VHGMD-ESKGRL-IVLHGP 180
G+++ +G + I E G+++I+ DSG Y CTA N + G D E+ G + + G
Sbjct: 467 FKGSVLTNGDKYTIDELAGSIVINNALEVDSGAYECTAENSIDGQDYEATGSATLTVLGK 526
Query: 181 SYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINI 238
+ P +T+ +C + EL W +G R+ N D
Sbjct: 527 TIITLPPADLTVREDTTATFQCEITYDHELDKPETYWMKDGQRLEANQD----------- 575
Query: 239 DGGLLEITNASFADAGEYECVVKST-------VGKISTKTTVIVEGPPGLPGGVQV-VEV 290
L I NA F+++G Y C V++T V ++ ++V+G PG P +Q+ +
Sbjct: 576 --NSLRIDNAMFSNSGTYTCFVETTLDESTDTVHSVNASAQLVVKGHPGPPQNLQLRAKE 633
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
+ + + W G N PI +Y I T W + W + + RY RK ++
Sbjct: 634 QEFAMDLFWEPGNDNNAPIQYYIIQYDTKWADMHWQFQANETADDDTSRY--RKVLHLQ- 690
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
P+ Y+F+VIA NE+G EPS+ +P + P + P + G G + + I W+
Sbjct: 691 ---PFVDYQFRVIAVNEIGRSEPSAGVAPTVDPQVAPPSKNPIEVSGSGTRPESMVIRWQ 747
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFY------YTEY 461
+ + +Y++ +R + +E F +T+ N I F Y EY
Sbjct: 748 SIHPFYYGGDDFHYEVAYRPRMSSEPFVKDTVYPE-NTDANPTGIIQNFIVNARKPYEEY 806
Query: 462 EVKVQAINDVGPGPESEV 479
E V+++N GPGPE E+
Sbjct: 807 EFSVRSMNSGGPGPEPEI 824
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 111/297 (37%), Gaps = 27/297 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D + LT TC A G+P+ +Y W+++G L + +++ DR + L I L D
Sbjct: 48 DTRLPLTLTCRATGIPEPSYYWYKDGALFD-----VDNNDRASLDGGNLVIESLTTADD- 101
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-----PEAA 116
YQC A N+L T S + L F+ E+ +G + + C P
Sbjct: 102 GQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPET-IQVDQGRPLKLRCGGSPGVPNGN 160
Query: 117 PKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA-TNVHGMDESKG 172
P P W I R GNL+ S V D+ Y C A NV G +
Sbjct: 161 PAPLIYWTDAAAKPTPITYNARINQDPEGNLVFSNVIASDAKGYYCQAINNVVGSSQRTP 220
Query: 173 RLIVLHGPSYYEQLPP------KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
++ ++ LPP IT A + +R + + Y + G
Sbjct: 221 KVTLM-----VSDLPPVESGASLITKPAANEIAIRTQLFKLKCIAYGYPTPVITWKRGEE 275
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283
L +I G L I+ +D G Y CV +T G T V VE P P
Sbjct: 276 QLQSGGRVSIEESGQELVISTVENSDKGTYTCVASNTGGDDEFSTVVTVESAPYFPA 332
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 101/271 (37%), Gaps = 37/271 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSE-TLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C A+G P +W R E L S + +E+ + + V D Y C A
Sbjct: 258 CIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTV-------ENSDKGTYTCVAS 310
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S + V + P F P S+ G G +V I C E P P W +G
Sbjct: 311 NTGGDDEFSTVVTVES-APYFPAPP--SDETKGPGESVDIECRSEGVPAPAVDWLVNGQP 367
Query: 130 IGS-----GGRRKIFENGN-----LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
R GN + IS + DS ++ C ATN + + + L V+
Sbjct: 368 WADFESNIDTERWTVVTGNPQLATISISNLQTTDSNVFQCIATNKYKEELTSVVLNVVSI 427
Query: 180 PSYYEQLPP---KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD---LNELET 233
P+ P K+++ + C H E WT G + N D ++EL
Sbjct: 428 PARIPSFTPVTRKLSVVEDSSAAFTC--HVEGRPTPTITWTFKGSVLTNGDKYTIDEL-- 483
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTV 264
G + I NA D+G YEC ++++
Sbjct: 484 ------AGSIVINNALEVDSGAYECTAENSI 508
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGY 369
HY++ R +S F V + V + D TG + I N P+ YEF V + N G
Sbjct: 760 HYEVAYRPRMSSEPF-VKDTVYPENTDANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGP 818
Query: 370 GEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYY 422
G P P+ + + P +PS + +++++WEP+ E N N+YY
Sbjct: 819 G----PEPEIHYGFSGEAAPGASPSGVTVEAISANEVNVTWEPIDPEDANGKLGGYNVYY 874
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ D + ++ GN+ A T YE+ V+A + G GP S+VV +
Sbjct: 875 NVKIASGQDKQMCVKSPCVVGNLQAA----------TTYEITVKAFTNAGEGPASDVVEV 924
Query: 483 WHD 485
D
Sbjct: 925 VTD 927
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 35/205 (17%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCR 67
+TC G P T +W G +L + D+Y I + +I N E D Y+C
Sbjct: 451 FTCHVEGRPTPTITWTFKGSVLT-------NGDKYTIDELAGSIVINNALEVDSGAYECT 503
Query: 68 AKNQLKTR----YSSAQLRVL-----TLKPS-FKKRPLESETYAGEGGNVTIFCNPEAAP 117
A+N + + SA L VL TL P+ R + T+ E
Sbjct: 504 AENSIDGQDYEATGSATLTVLGKTIITLPPADLTVREDTTATFQCE------ITYDHELD 557
Query: 118 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
KP+ W KDG R + ++ +L I +SG Y+C +DES +
Sbjct: 558 KPETYWMKDGQ------RLEANQDNSLRIDNAMFSNSGTYTCFVETT--LDESTD---TV 606
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRC 202
H + QL K +NLQLR
Sbjct: 607 HSVNASAQLVVKGHPGPPQNLQLRA 631
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 47/188 (25%)
Query: 184 EQLPPKI-----TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
+ +PP I +I L L + + + +Y W +G + ++D N+ ++
Sbjct: 32 DDVPPSIVEQPESINGDTRLPLTLTCRATGIPEPSYYWYKDGA-LFDVDNND----RASL 86
Query: 239 DGGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVE----------------- 276
DGG L I + + AD G+Y+C + +G KI T + +
Sbjct: 87 DGGNLVIESLTTADDGQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPL 146
Query: 277 -----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 331
G PG+P G + I WTD A PIT+ AR N + V +V
Sbjct: 147 KLRCGGSPGVPNG-------NPAPLIYWTDAAAKPTPITYN---ARINQDPEGNLVFSNV 196
Query: 332 IGKEVDRY 339
I + Y
Sbjct: 197 IASDAKGY 204
>gi|167045807|gb|ABZ10475.1| L1 cell adhesion molecule isoform 1 precursor (predicted)
[Callithrix jacchus]
Length = 1252
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 205/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEITWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A N+ ++A + V+ L K +++TY A G + C AP P W +
Sbjct: 406 AGNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
DG + R + NG L I + +D+G Y C A N D++ ++ + +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAAN----DQNNVTIVANLQIKDATQ 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W +G DL EL ++ I+ G
Sbjct: 520 ITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDG 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTELDMVESRAQLLVVGSPGSVPRLALSDLHLLKQSQVRLS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 741 MDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNRQG 795
Query: 473 PGPESEVV 480
GPE +V
Sbjct: 796 KGPEPQVT 803
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 188/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHDYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C + ++ + ++ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRST-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P A S + K + +SW P E
Sbjct: 586 QGNYSCVASTELDMVESRAQLLVVGSPGSVPRLALSDL--HLLKQSQVRLSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 ---PESEVV 480
P SE V
Sbjct: 699 EPSPVSETV 707
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 115/304 (37%), Gaps = 52/304 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI------QDNVLTIRYLN--- 56
D++ CEA G P+V + W R+G + + +D + TI N
Sbjct: 52 DISLKCEASGKPEVQFRWTRDG-------VHFKPKDELGVTVYQSPHSGSFTITGNNSNF 104
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
+R +Y+C A N+L T S + P + K ++ EG +V + C+P +
Sbjct: 105 AQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPS 163
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------ 161
+P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 164 AEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKE 223
Query: 162 ------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
+ M + K RL+ S + + + L L C A + ++
Sbjct: 224 PIDLRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWL 277
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G M + + N N L++ N D GEY C+ ++++G V V
Sbjct: 278 RPS-----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSARHDYYVTV 329
Query: 276 EGPP 279
E P
Sbjct: 330 EAAP 333
>gi|170649623|gb|ACB21210.1| L1 cell adhesion molecule isoform 1 precursor (predicted)
[Callicebus moloch]
Length = 1252
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 208/492 (42%), Gaps = 64/492 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + P D + QC
Sbjct: 354 CQVQGRPQPEITWRING-------IPVEELAKDQKYRIQRGALILSNAQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN------VHGMDESKGRLIVLHG 179
DG + R + NG L I + +D+G Y C A N + + K ++ G
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQIKDATQIVQG 523
Query: 180 P-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNIN 237
P S E+ ++T C A + L + W +G DL EL ++
Sbjct: 524 PRSTIEKKGSRVTFT--------CQASFDPSLQPSITWRGDG-----RDLQELGDSDKYF 570
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTS 294
I+ G L I + ++D G Y CV + + + ++ ++V G PG + + ++H +
Sbjct: 571 IEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGSVPRLALSDLHLLKQNQ 630
Query: 295 ATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ W+ + PI Y I +A W S +GK + S
Sbjct: 631 VHLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTT 676
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+
Sbjct: 677 LKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVITWK 736
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
PL NAP + Y++ WR + E + V + + + + YE+KVQA+
Sbjct: 737 PLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAV 791
Query: 469 NDVGPGPESEVV 480
N G GPE +V
Sbjct: 792 NRQGKGPEPQVT 803
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 188/496 (37%), Gaps = 70/496 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P D Q++ T++ L+ E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DHVTYQNHNKTLQLLSVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + V P + ++P ++ Y G G + C + P+P+ W+
Sbjct: 312 CVAENSLGSARHDYYVTV-EAAPYWLQKP-QNHLY-GPGETARLDCQVQGRPQPEITWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNAQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVK------STVGKISTK-TTVIVEGPPGLPGGVQVV 288
N G L I + D G Y C + V + K T IV+GP
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQIKDATQIVQGPRST------- 527
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+ K + + +T A+ + W ++ E +G + D+Y +
Sbjct: 528 -IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVI 578
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L + +A EL E + +P P A S + K + +SW
Sbjct: 579 HSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGSVPRLALSDL--HLLKQNQVHLSWS 636
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
P E NAP Y I + K + +L K GN +++ Y Y +V A
Sbjct: 637 PA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTA 691
Query: 468 INDVGPG---PESEVV 480
IN GPG P SE V
Sbjct: 692 INKYGPGEPSPVSETV 707
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 115/304 (37%), Gaps = 52/304 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI------QDNVLTIRYLN--- 56
D++ CEA G P+V + W R+G + + +D + TI N
Sbjct: 52 DISLKCEASGKPEVQFRWTRDG-------VHFKPKDELGVTVYQSPHSGSFTITGNNSNF 104
Query: 57 PERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
+R +Y+C A N+L T S + P + K ++ EG +V + C+P +
Sbjct: 105 AQRFQGIYRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVE-EGESVVLPCHPPPS 163
Query: 117 PKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------ 161
+P ++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 164 AEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKE 223
Query: 162 ------TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215
+ M + K RL+ S + + + L L C A + ++
Sbjct: 224 PIDLRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWL 277
Query: 216 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G M + + N N L++ + D GEY CV ++++G V V
Sbjct: 278 RPS-----GPMPADHVTYQNHN---KTLQLLSVGEEDDGEYRCVAENSLGSARHDYYVTV 329
Query: 276 EGPP 279
E P
Sbjct: 330 EAAP 333
>gi|334333316|ref|XP_001367462.2| PREDICTED: protein sidekick-1 [Monodelphis domestica]
Length = 2134
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 202/480 (42%), Gaps = 33/480 (6%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
TC+A GVP W+++ ++ L + + L I+ L+P+ D ++QC A+
Sbjct: 324 TCQAMGVPVPNLEWYKDSVPISK----LRNSRYKVLVSGGLRIQKLHPD-DSGIFQCFAR 378
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N+ + L V + P+F RP++ T +G + C APKP W++ I
Sbjct: 379 NEGGEIETHTYLDVTNIAPTFTLRPVD--TTVTDGMTAMLTCEVSGAPKPAITWRRGKQI 436
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G L I+PV D+G Y+C A N G + L V + +
Sbjct: 437 LASGSVQIPRFILLESGGLQITPVFLQDAGNYTCYAVNSEGSLNAFAMLTVWN--RTFIV 494
Query: 186 LPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
PP+ T+ L C A + + + Y+W + + I + + + DG LL
Sbjct: 495 FPPEDRTVIKGTTATLHCGAIHDPRIPIRYVWKKDNIVINPATSSRIV---VEKDGSLL- 550
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDG 302
I+ D G+Y C V S G S + V P P + + H + + W
Sbjct: 551 ISQTWSGDIGDYTCEVISEGGNDSRMARLEVIELPHSPQNLLASLNSSHSRTVMLSWVRP 610
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
P+ +Y I+ + NS W V + E+ T L P TY+F+V
Sbjct: 611 FDGNSPVLYY-IVELSENNSPW-KVHLSNVDPEMTSVTVSG-------LTPARTYQFRVC 661
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G G+ S+ + + P + P P I G + + W+P P + N Y
Sbjct: 662 AVNQVGKGQHSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLHGY 721
Query: 423 KIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+ +R E+Q + + I + +T+YE++V A N G G S VT
Sbjct: 722 ILRYRLAGLPGEYQHRNIT---SPEINYCLVKDLIIWTQYEIQVAAYNGAGLGTFSRAVT 778
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 110/279 (39%), Gaps = 25/279 (8%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDP 61
+++T C A P +++ +W RNG + + L + R LTI NP D
Sbjct: 226 SEVTLECIANARPIEELSMTWKRNGVKITNG---LHNLGRR------LTI--TNPTSSDI 274
Query: 62 AMYQCRAKNQLK-TRYSSAQLRVL--TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
MY C A +LK T + A+ + ++P + E+ A V I C P
Sbjct: 275 GMYICEA--ELKGTNFEPARTKAFLSIIEPPYFTAEPENRILAQVEKTVDITCQAMGVPV 332
Query: 119 PKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KD I R K+ +G L I + DDSGI+ C A N G E+ L V
Sbjct: 333 PNLEWYKDSVPISKLRNSRYKVLVSGGLRIQKLHPDDSGIFQCFARNEGGEIETHTYLDV 392
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
+ + P T+ L C + + + G++ + I
Sbjct: 393 TNIAPTFTLRPVDTTVTDGMTAMLTCEVSGAPKPAITWRRGKQILASGSVQIPRF----I 448
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+IT DAG Y C ++ G ++ + V
Sbjct: 449 LLESGGLQITPVFLQDAGNYTCYAVNSEGSLNAFAMLTV 487
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P V V + + T+QW +G RP T Y I AR + W + K+
Sbjct: 1817 EGSPGSPRDVLVTK-SASELTLQWMEGNPGDRPTTGYIIEARPSDEGLW-----DMFVKD 1870
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R ++ L TYEF+V+A N+ GYGEPSSPS + ++ P+
Sbjct: 1871 IPRSATSYTVGLDK-LRQGVTYEFRVVAVNDFGYGEPSSPSVAVSAQSETPF 1921
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 100/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N + + T + +Y I T D Y+C
Sbjct: 39 LVLTCLAEGSWPLEFKWICNDNEITTYT----SEYKYIIPSLERT--------DAGFYRC 86
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +F + G G V + + P+P+ W
Sbjct: 87 VVRNRMGALLQRKSEVQVAYMG---NFIDADQRKTVFQG-GAAVLNLPHIISYPRPQVTW 142
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+DG+ I R I L+I + D+G Y A N + L S
Sbjct: 143 FRDGHKIIPSSRIAITLENQLVILATTAGDTGGYYVQAVNEKNGENKTSPFTYLSIESES 202
Query: 184 EQ---------LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ +PP T +A + L C A+ + +++ W NGV+I N L+ L
Sbjct: 203 DTPDIMAPVIVIPPGNTSVVAGTSEVTLECIANARPIEELSMTWKRNGVKITN-GLHNL- 260
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
G L ITN + +D G Y C
Sbjct: 261 -------GRRLTITNPTSSDIGMYIC 279
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 87/219 (39%), Gaps = 36/219 (16%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
EV S +QW G+ PI ++ + + R W + ++S ++R
Sbjct: 1406 EVTSRSLQLQWVPGSDGSSPIRYFTVQIRELPRGEWQTYSSSISHEATAHVIER------ 1459
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
L P+++Y+ ++ A N++G + S+ + T D P + P+ + +
Sbjct: 1460 ------LNPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPNCVSVTPHTTSSVL 1513
Query: 405 ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GN 444
+ W+P E N + Y+I++R+ KN + ++E + +
Sbjct: 1514 VQWQPPRDESLNGLLVGYRIYYRELEYETGPGTESKTVKNPSALRAELTPQSSFKTVNSS 1573
Query: 445 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ + Y YEV + A N +G P S V ++
Sbjct: 1574 SALTTYELTHLKKYKRYEVIMTAYNIIGESPASAPVEVF 1612
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 95/245 (38%), Gaps = 56/245 (22%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 324
T+ ++ PG P V H TS+ +QW D + NG + Y+I +
Sbjct: 1485 TEAVTTLQDVPGEPPNCVSVTPHTTSSVLVQWQPPRDESLNGL-LVGYRI---------Y 1534
Query: 325 FNVSEHVIGKEVDRYTGRKEASIENVLVPWST-----------------------YEFKV 361
+ E+ G + T + +++ L P S+ YE +
Sbjct: 1535 YRELEYETGPGTESKTVKNPSALRAELTPQSSFKTVNSSSALTTYELTHLKKYKRYEVIM 1594
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N +G S+P + A P AP I L + W+P P E QN
Sbjct: 1595 TAYNIIGESPASAPVEVFVGEA-APAMAPQNIQVNPLTASQLEVIWDPPPVESQNGIIQG 1653
Query: 422 YKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI++ +NDTE F ET+ VR+ + +T+Y V + A N G
Sbjct: 1654 YKIYYWEADSQNDTENMKVLFLPETM----------VRLKNLTSHTKYLVSISAFNAAGD 1703
Query: 474 GPESE 478
GP+SE
Sbjct: 1704 GPKSE 1708
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1295 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRVATSSPNKFTTVE--VGSTVR 1352
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++T L P S Y F+ A G+GEP + D+P P +
Sbjct: 1353 QFTATD-------LTPESAYIFRASAKTRQGWGEPLEATVITTEKRDRP-APPRHLLIPQ 1404
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ S+ + +P ++P Y+ + R+ E+Q+ + V+ + F
Sbjct: 1405 SEVTSRSLQLQWVPGSDGSSPIRYFTVQIRELPRGEWQTYSSSISHEATAHVIERLNPF- 1463
Query: 458 YTEYEVKVQAINDVGP---GPESEVVTIWHD 485
T Y+++++A ND+G E+E VT D
Sbjct: 1464 -TSYKLRLKATNDIGDSDFSAETEAVTTLQD 1493
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 255 EYECVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITH 311
E V + +G + T +T+ PP LPG + + + SAT+Q+ G I+
Sbjct: 961 EVAAVTATGIGLV-TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISR 1019
Query: 312 YKIIARTNWNSTWFNVSEHVIGKEVD---RYTGRKEASIENV----LVPWSTYEFKVIAG 364
+ + + IG E + Y E + + L P++ Y F++
Sbjct: 1020 WIVEGQIG-----------AIGDEEEWSCLYEEENEPDAQMLEIPNLTPYTHYRFRMRQV 1068
Query: 365 NELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIY 421
N +G P SPS + T P AP+ + L + W PLP + N ++
Sbjct: 1069 NIVG-PSPFSPSSRVIQTLQAPPDIAPASVTVRTASETSLWLRWVPLPDSQYNGNPESVG 1127
Query: 422 YKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPG 474
Y+I +WR T+ QS + V + R+ E+ +TEYE+++QA N +G G
Sbjct: 1128 YRIKYWR----TDLQSSVM-----VQVISDRLEREYTIEELEEWTEYELQMQAFNAIGAG 1178
Query: 475 PESEVV 480
P SE+V
Sbjct: 1179 PWSEMV 1184
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 24/247 (9%)
Query: 239 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 293
D +LEI N + + + VG S++ ++ PP + P V V +T
Sbjct: 1046 DAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSPSSRVIQTLQAPPDIAPASVTVRTASET 1105
Query: 294 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
S ++W D NG P + Y+I RT+ S+ V VI ++R E +IE
Sbjct: 1106 SLWLRWVPLPDSQYNGNPESVGYRIKYWRTDLQSS---VMVQVISDRLER-----EYTIE 1157
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ + YE ++ A N +G G P S + T P AP + + I+W
Sbjct: 1158 ELEEW-TEYELQMQAFNAIGAG-PWSEMVRGRTRESVPSAAPENVSVEAVSSTQILITWA 1215
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+P + QN + YKI ++ K+ D+E ++ ++ GN +V+ + Y YE++V A
Sbjct: 1216 SVPEQDQNGLILGYKILFKAKDLDSEPKTHVVR--GNHTQSVL-LAGLRKYVLYELQVLA 1272
Query: 468 INDVGPG 474
+G G
Sbjct: 1273 FTRIGNG 1279
>gi|440894049|gb|ELR46614.1| Neural cell adhesion molecule L1 [Bos grunniens mutus]
Length = 1257
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 208/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y I L + L P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELGKDQKYRIHHGALVLSNLQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVEL-PAKILTP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDR 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
+G + R + NG L I + +D+G Y C A N D+S ++ + +
Sbjct: 464 EGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAAN----DQSNVTIVANLQVKDATR 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W R +DL EL ++ I+
Sbjct: 520 IMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTW-----RRDALDLQELGDSDKYFIEDE 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG +++ + H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E Q ++ + VV S F YE+KVQ +N G
Sbjct: 741 MDWNAPQVQYRVQWRPQ---EMQGAWQEQIVSDPFLVVSNTSTF--VPYEIKVQTVNSQG 795
Query: 473 PGPESEVV 480
GPE ++
Sbjct: 796 KGPEPQIT 803
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 189/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LILECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSDRHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + G+ + + +G L++S + D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+LP KI + + T LL A+ G + ++ + E + D
Sbjct: 422 VELPAKI-LTPDNETYMAVQGSTAYLLCKAF-----GAPVPSVQWLDREGKTVLQDERFF 475
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
TN + D G Y C + ++ + V+ + G + + K +
Sbjct: 476 PYTNGTLGIRDLQTNDTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSA-IEKRGSR 534
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H T W ++ E +G + D+Y E + + L
Sbjct: 535 VMFTCQASFDPSLQH-----STTWRRDALDLQE--LG-DSDKYFIEDERLVIHSLDYSDQ 586
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A +L E + +P P S K + +SW P + N
Sbjct: 587 GNYSCVASTKLDVVESRAELLVVGSPGPVPQLELS--DHHLLKQSQVRLSWSPA--DDHN 642
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 643 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 699
Query: 475 --PESEVV 480
P+SE V
Sbjct: 700 PSPDSETV 707
Score = 45.1 bits (105), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 115/300 (38%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLN--SETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
D++ CEA G P+V + W R+G L E + +Q + ++ +
Sbjct: 52 DVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSSNFAQSFQGT 111
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 112 YRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVE----EGESVILPCHPPPSAEPL 167
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 168 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDL 227
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M + K L+ S + + + L L C A + ++
Sbjct: 228 RVKATNSMMDRKPHLLFPTNSSSH------LVALQGQPLILECIAEGFPTPTIKWLRPS- 280
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 281 ----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAP 333
>gi|432115920|gb|ELK37062.1| Protein sidekick-2 [Myotis davidii]
Length = 1681
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 201/483 (41%), Gaps = 48/483 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ ++ L Q D L I L P+ D M+QC A+N
Sbjct: 260 CRAKGVPPPSITWYKDAAVVEVARLSRFRQR----GDGGLQISGLVPD-DTGMFQCYARN 314
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 315 SAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 372
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LL+SP D+G Y+C ATN + + +
Sbjct: 373 ASGSVQLPRFTLLESGSLLVSPARISDAGTYTCLATNF------------VWARTRITRP 420
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + Y+W +G +G + +P + +D G L I
Sbjct: 421 PQDQSVIKGTQASMVCGVAHDPRVTIRYVWEKDGAALGVEN-----SPRVRLDKNGSLHI 475
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
T D G Y C V S G S + V P P + + + + W
Sbjct: 476 TQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQLPHAPEHPVATLSASERRAINLTWAKPF 535
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y + N N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 536 DGNSPLIRYVLEMSEN-NAPW-----AVLLASVD---PEATSVVVKGLVPARSYQFRLCA 586
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 587 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPENHQNGLLKGYI 646
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 647 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSGKV 701
Query: 481 TIW 483
T W
Sbjct: 702 TEW 704
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 24/256 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 286
D +E P++N T+ SF + V S + S K + P P V
Sbjct: 965 DARSMEVPDLN------PFTHYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVT 1017
Query: 287 VVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++WT + NG P + YKI +R + + V HV+ V+R
Sbjct: 1018 LRTASETSLWLRWTPLPEMEYNGNPESVGYKIKYSRADGHG---RVLSHVVLDRVER--- 1071
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S T P P+ +
Sbjct: 1072 --EYTIED-LEEWTEYRVQVQAFNAIGNG-PWSQMVMGRTRESVPSSGPTNVSALATTSS 1127
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+ + W P+P ++N + YK+ +R+K D++ Q GN ++ V++ Y Y
Sbjct: 1128 SMLVRWSPVPEAERNGLLLGYKVLYREK-DSDPQPRVWLVEGNASLS-VQLTGLGKYVLY 1185
Query: 462 EVKVQAINDVGPGPES 477
EV+V A +G G S
Sbjct: 1186 EVQVLAFTRIGDGSPS 1201
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKE 335
PG P + + + S T+Q+ G I+ + + A+ W V H + E
Sbjct: 906 PGAPTNLGISNIGPRSVTLQFKPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNE 963
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
D + + + L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 964 PDA----RSMEVPD-LNPFTHYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTL 1018
Query: 396 GGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV--R 451
L + W PLP + N ++ YKI + + + +G V VV R
Sbjct: 1019 RTASETSLWLRWTPLPEMEYNGNPESVGYKIKYSRADG----------HGRVLSHVVLDR 1068
Query: 452 IPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
+ E+ +TEY V+VQA N +G GP S++V
Sbjct: 1069 VEREYTIEDLEEWTEYRVQVQAFNAIGNGPWSQMV 1103
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 28/219 (12%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
PP P V+ +V S + W G+ P+ +Y + R + W S V
Sbjct: 1315 PPSKPV-VRQEDVKARSVLLSWEPGSDGLSPVRYYSVQTRELPSGRWALHSASV------ 1367
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
+ A + + L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1368 --SHNASACVVDRLKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIVSVTP 1425
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ I W+P +K N + ++I +R+ + TL+ N G + S F
Sbjct: 1426 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGARWTELTSLFS 1485
Query: 458 -------------------YTEYEVKVQAINDVGPGPES 477
+ YE+++ N VG GP S
Sbjct: 1486 MRNLSRPSLTQYELDNLNKHRRYEIRMTVYNAVGEGPLS 1524
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T S V+ +
Sbjct: 1214 PGPPMGILFPEVRTTSVRLVWQPPAAPNGIILAYQITHRLN-ATTANTASVEVLAPSARQ 1272
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1273 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVRQE 1324
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY + R+ + + N VV F
Sbjct: 1325 DVKARSVLLSWE--PGSDGLSPVRYYSVQTRELPSGRWALHSASVSHNASACVVDRLKPF 1382
Query: 457 YYTEYEVKVQAINDVGPGPESE 478
T Y+ +V+A ND+G SE
Sbjct: 1383 --TSYKFRVKATNDIGDSEFSE 1402
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 152/436 (34%), Gaps = 82/436 (18%)
Query: 105 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 57 GEAAVIRAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 116
Query: 163 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 211
N D + I L GP+ I +A + + C A+ L+
Sbjct: 117 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIK 176
Query: 212 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 266
+ +W +GV + G D N L I N + +DAG YEC + S+V
Sbjct: 177 LHILWKKDGVLLSGGISDYNR-----------RLTIPNPTGSDAGFYECEAVLRSSSVPS 225
Query: 267 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 326
+ + V PP V+ E H T+ + D + + I TW+
Sbjct: 226 VVRGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYK 274
Query: 327 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQY 379
+ V + R+ R + ++ + LVP T F+ A N G Y +S +P
Sbjct: 275 DAAVVEVARLSRFRQRGDGGLQISGLVPDDTGMFQCYARNSAGEVQTSTYLAVTSIAPNI 334
Query: 380 NT-PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK------KNDT 432
P D S + G + S P P I W+K
Sbjct: 335 TRGPLD------STVIDGMSVVLACETSGAPRP-----------AITWQKGERILASGSV 377
Query: 433 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK-VQAINDVGPGPE----------SEVVT 481
+ TL E G++ ++ RI YT V A + P+ S V
Sbjct: 378 QLPRFTLLESGSLLVSPARISDAGTYTCLATNFVWARTRITRPPQDQSVIKGTQASMVCG 437
Query: 482 IWHDPLVIISYVCQGD 497
+ HDP V I YV + D
Sbjct: 438 VAHDPRVTIRYVWEKD 453
>gi|431918209|gb|ELK17437.1| Protein sidekick-1 [Pteropus alecto]
Length = 1357
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 197/483 (40%), Gaps = 45/483 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P T W+++ + + L+ + L I+ L P+ D ++QC A N
Sbjct: 60 CHAMGAPPPTLRWYKDAVPIGT----LQGPRYRVLPGGGLRIQQLRPD-DSGIFQCFASN 114
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ L V + P+F + P++ T G + C APKP W++ +++
Sbjct: 115 DGGEIQTHTYLAVTNVAPAFTRLPVD--TTVTNGTTAVLRCGVSGAPKPAITWRRGNHVL 172
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L ISPVS D+G Y+C ATN G + L V + S
Sbjct: 173 ASGSVRIPRFMLLESGGLQISPVSVQDAGDYTCYATNAEGALNASATLTVWNRTSIVTPP 232
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN------INIDG 240
++ I L C A + + V Y+W + N + TP+ + DG
Sbjct: 233 EDRVVIKG-TTATLPCGATHDPRVSVRYVWKKD---------NAILTPSSSSRAVVEKDG 282
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQ 298
LL I+ D G+Y C V S G S + V P P + ++ +AT+
Sbjct: 283 SLL-ISQTWSGDIGDYTCEVLSEGGNDSRAARLEVIELPHPPQNLLARLSPPRSHAATLS 341
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358
W P+ HY + N NS W V +G E T R L P TY+
Sbjct: 342 WVRPFDGNSPVLHYVVELSEN-NSPW-KVHLPNVGPEKTGVTVRG-------LTPARTYQ 392
Query: 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 418
F+V A N++G G+ S+ + + P + P P I G + + W+P P + N
Sbjct: 393 FRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGA 452
Query: 419 NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y++ + + + + + +T+YE++V A N G G S
Sbjct: 453 LHGYRLAGLPGEHQQ------RNITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSR 506
Query: 479 VVT 481
VT
Sbjct: 507 AVT 509
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 7/190 (3%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLL 145
P F P S A V I C+ AP P W KD IG+ G R ++ G L
Sbjct: 38 PYFTAEP-ASRIVAEVEETVDIVCHAMGAPPPTLRWYKDAVPIGTLQGPRYRVLPGGGLR 96
Query: 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 205
I + DDSGI+ C A+N G ++ L V + + +LP T+ LRC
Sbjct: 97 IQQLRPDDSGIFQCFASNDGGEIQTHTYLAVTNVAPAFTRLPVDTTVTNGTTAVLRCGVS 156
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ + ++ + G++ + + ++ G L+I+ S DAG+Y C + G
Sbjct: 157 GAPKPAITWRRGNHVLASGSVRIPRF----MLLESGGLQISPVSVQDAGDYTCYATNAEG 212
Query: 266 KISTKTTVIV 275
++ T+ V
Sbjct: 213 ALNASATLTV 222
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 30/220 (13%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
V EV S +QW G+ PI ++ + R W S V G
Sbjct: 1058 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGQWQTYSSSV-------SHGATA 1110
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
++E L P+++Y+ ++ A N++G E S+ + T D P + PS + +
Sbjct: 1111 CTVER-LRPFTSYKLRLKATNDIGDSEFSAETEAVTTLQDVPGEPPSSVSVTPHTTSSVL 1169
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV-VRIPSEFY------ 457
I W+P E N Y+I++R+ D E S T + + A+ +P++
Sbjct: 1170 IQWQPPRDESLNGLLQGYRIYYREL-DYEAASATESKMLSTPSALRTELPAQSSFRTVNS 1228
Query: 458 --------------YTEYEVKVQAINDVGPGPESEVVTIW 483
Y YEV + A N +G P S V ++
Sbjct: 1229 SSALTTYELTHLKKYRRYEVVLTAYNIIGESPASTPVEVF 1268
>gi|338729750|ref|XP_001491834.3| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
L1-like [Equus caballus]
Length = 1284
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 209/488 (42%), Gaps = 56/488 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 381 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNIQPS-DTMVTQCE 432
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A EG + C AP P W K
Sbjct: 433 ARNRHGVLLANAYIYVVQL-PAKILTP-DNETYMAVEGSTAYLLCKAFGAPVPSVQWLDK 490
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
+G + R + +G L I + +D+G Y C A N D++ ++ + +
Sbjct: 491 EGKTVLQDERFFPYTDGTLGIRDLQANDTGHYFCQAAN----DQNNVTIVANLQVKDATQ 546
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L+ + W +G +L EL ++ I+ G
Sbjct: 547 ITQGPRSAIEKKGSRVTFTCQASFDPSLEHSITWRGDG-----HNLQELGDSDKYIIEDG 601
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG +++ + H ++ +
Sbjct: 602 RLVIHSLDYSDQGNYSCVAGTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLS 661
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 662 WSPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 707
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ ++W+PL
Sbjct: 708 PYVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTWKPLKW 767
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
NAP + Y++ WR + E + V + + + + YE+KVQA+N G
Sbjct: 768 MDWNAPQVQYRVQWRPQGTRGTWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQG 822
Query: 473 PGPESEVV 480
GPE +
Sbjct: 823 KGPEPPIT 830
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 188/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R + S DR Q++ T++ LN E D Y+
Sbjct: 287 LILECIAEGFPTPTIKWLRPSGPMPS--------DRVTYQNHNKTLQLLNVGEEDDGEYR 338
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G V + C + P+P+ W+
Sbjct: 339 CLAENSLGSDRHAYYVTV-EAAPYWLQKP-QSHLY-GPGETVRLDCQVQGRPQPEVTWRI 395
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S + D+ + C A N HG +++ + Y
Sbjct: 396 NGIPVEELAKDQKYRIQRGALILSNIQPSDTMVTQCEARNRHG-------VLLANAYIYV 448
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP KI + + T LL A+ G + ++ + E + D
Sbjct: 449 VQLPAKI-LTPDNETYMAVEGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDERFF 502
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K +
Sbjct: 503 PYTDGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQITQGPRSA-IEKKGSR 561
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H W N+ E +G + D+Y + + L
Sbjct: 562 VTFTCQASFDPSLEH-----SITWRGDGHNLQE--LG-DSDKYIIEDGRLVIHSLDYSDQ 613
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +AG +L E + +P P S K + +SW P + N
Sbjct: 614 GNYSCVAGTKLDVVESRAELLVVGSPGPVPQLELS--DHHLLKQSQVRLSWSPA--DDHN 669
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 670 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 726
Query: 475 --PESEVV 480
P SE V
Sbjct: 727 PSPASETV 734
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 113/300 (37%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAM 63
D++ CEA G P+V + W +G E L + +T N +R
Sbjct: 79 DISLKCEASGKPEVEFRWTHDGVHFKPKEELGVTVHQEPHSGSFTITGNNSNFAQRFQGT 138
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 139 YRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVE----EGESVILPCHPPPSAEPL 194
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 195 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDL 254
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M K RL+ S + + + L L C A + ++
Sbjct: 255 RVKATNSMISRKPRLLFPTNSSSH------LVALQGQPLILECIAEGFPTPTIKWLRPS- 307
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 308 ----GPMPSDRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAP 360
>gi|345782838|ref|XP_848767.2| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule
isoform 2 [Canis lupus familiaris]
Length = 1303
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 199/495 (40%), Gaps = 55/495 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKF 121
QC A N+ ++ + VL P R L S Y + C +P P
Sbjct: 431 QCNASNEYGYLLANTFVNVLAEPP----RILTSANTLYQVIADRPALLDCAFFGSPLPTI 486
Query: 122 VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W K GS I+ ENG L I +D +G Y+C A N G+ +++ L V
Sbjct: 487 EWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGVAKNEVHLEVKD 544
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
+Q P + + C + L W + + N +
Sbjct: 545 ATRIIKQ-PEYAVVQRGSTVSFECKVKHDHTLIPTITWLKDNGELPN-------DGRFTV 596
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVV 288
D L + + D G Y CV +T+ +S + V P P P +++
Sbjct: 597 DKDHLVVADVRDNDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELT 656
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEAS 346
+ S + WT G N PI + I + W + +E + +
Sbjct: 657 DQLDKSVQLSWTPGDDNNSPIIKFIIEYEDAMHEAGLWHHQTE----------VSGMQTT 706
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ L P+ Y F+V+A N LG PS S QY T A +P P+ + G G + +L I+
Sbjct: 707 AQLKLSPYVNYSFRVMAINNLGRSLPSEASEQYLTKAAEPDTNPTAVEGLGSEPDNLVIT 766
Query: 407 WEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465
W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KV
Sbjct: 767 WKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKV 821
Query: 466 QAINDVGPGPESEVV 480
QA+NDVG PE VV
Sbjct: 822 QALNDVGFAPEPAVV 836
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 107/270 (39%), Gaps = 36/270 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ + E D YQ
Sbjct: 288 LSLECIAEGLPTPIIYWIKE-----DGTLPI---NRTFYRNFKKTLQIIQVSEADSGNYQ 339
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 340 CIAKNALGAIHHTITVTV-KAAPYWIMAPQNLVLSPGEDG--TLICRANGNPKPRISWLS 396
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 397 NGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANTFVNVLAE--- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A LLD A+ + G + + E
Sbjct: 453 ----PPRILTSA--NTLYQVIADRPALLDCAFFGSPLPTIEWFKGAKGSALH----EDIY 502
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVG 265
+ + G LEI A G Y CV ++ +G
Sbjct: 503 VLHENGTLEIPVAQKDSTGTYTCVARNKLG 532
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 114/315 (36%), Gaps = 47/315 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T + P P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLILPCRPPLGLP 174
Query: 118 KPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSG-IYSCTATNVH---------- 165
P W + + R NG+L S V +D+ Y C A H
Sbjct: 175 PPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPI 234
Query: 166 -----GMDESKGRLIV-LHGPSYY-----EQLPPKITI----AAHRN------LQLRCSA 204
+DE + L +Y + PP A+H+ L L C A
Sbjct: 235 SVKVISVDELNDTIAANLSDTEFYSAKSNRERPPTFLTPEGNASHKEELRGNVLSLECIA 294
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
E L W G + +N N L+I S AD+G Y+C+ K+ +
Sbjct: 295 --EGLPTPIIYWIKED---GTLPINRTFYRNFK---KTLQIIQVSEADSGNYQCIAKNAL 346
Query: 265 GKISTKTTVIVEGPP 279
G I TV V+ P
Sbjct: 347 GAIHHTITVTVKAAP 361
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 16/138 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQGSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPYSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEPLPR 412
+ L++ W+P R
Sbjct: 960 IVNPTLDSLTLEWDPPSR 977
>gi|301762171|ref|XP_002916515.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1-like [Ailuropoda
melanoleuca]
Length = 2143
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 199/478 (41%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ + + L++ + L I+ L PE D ++QC A N
Sbjct: 343 CQAMGVPLPTLQWYKDAVSIGT----LQNPRYKLLSSGGLRIQGLRPE-DSGIFQCFASN 397
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F + P++ T +G + C APKP W++ +I+
Sbjct: 398 EGGEIQTYTYLDVTNVAPAFTQLPVD--TTVTDGMTAVLRCEVSGAPKPAITWRRGKHIL 455
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 456 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASAALTVWNRTSIVNPP 515
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I + L C A + + + Y+W + I + + + DG LL I+
Sbjct: 516 EDRVVIKGTTAM-LHCGATHDPRITLRYVWKKDNTVITPSSSSRIV---VEKDGSLL-IS 570
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + H + + W
Sbjct: 571 QTWSGDIGDYTCEIISEGGNDSRTARLEVIELPHSPQNLLASLNSSHSHTVVLSWVRPFD 630
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y + N NS W V +G E+ R L P TY+F+V A
Sbjct: 631 GNSPVLYYIVEVSEN-NSPW-KVHLSNVGPEMTGVAVRG-------LTPARTYQFRVCAV 681
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 682 NQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 741
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E Q + + + + +T+YE++V A N G G S VT
Sbjct: 742 RYRLAGLPGEHQQRNIT---SPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVFSRAVT 796
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 86/226 (38%), Gaps = 21/226 (9%)
Query: 60 DPAMYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA 116
D +Y C A + + A L ++ P F P ES A V I C
Sbjct: 291 DTGLYVCEATLRGSAFNAATAEAFLSIIE-PPYFTAEP-ESRMLAEVEDTVDIACQAMGV 348
Query: 117 PKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
P P W KD IG+ R K+ +G L I + +DSGI+ C A+N G ++ L
Sbjct: 349 PLPTLQWYKDAVSIGTLQNPRYKLLSSGGLRIQGLRPEDSGIFQCFASNEGGEIQTYTYL 408
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLN 229
V + + QLP T+ LRC + +I VRI L
Sbjct: 409 DVTNVAPAFTQLPVDTTVTDGMTAVLRCEVSGAPKPAITWRRGKHILASGSVRIPRFML- 467
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ + V
Sbjct: 468 --------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASAALTV 505
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1835 EGSPGSPRDVLVTK-SASELTLQWTEGNAGRTPTTGYVIEARPSDEGLW-----DMFVKD 1888
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1889 IPRSATSYTVSLDK-LRQGVTYEFRVVAVNQAGYGEPSSPSTAVSAQVETPF 1939
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 116/285 (40%), Gaps = 47/285 (16%)
Query: 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
++ NG R+ + N + I GLL +T + A V S ++T +T+
Sbjct: 946 VYGRNGSRLTHTLSNTTQEYKIK---GLLSLTTYTIDVAA-----VXSPGAGLATSSTIS 997
Query: 275 VEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 331
PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 998 SGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG-----------A 1046
Query: 332 IGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 384
IG E V Y E + + L P++ Y F++ N +G S S T
Sbjct: 1047 IGDEEEWVSLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNVVGASPFSQSSRVIQTLQA 1106
Query: 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKE 441
P AP+ I L + W PLP + N ++ Y+I +WR + Q+ L +
Sbjct: 1107 PPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIGYWRP----DLQAPVLAQ 1162
Query: 442 YGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVV 480
N R+ EF +TEYE+++QA N +G GP SE V
Sbjct: 1163 VIND-----RLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSETV 1202
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 99/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L + T + +Y I +++ L D Y+C
Sbjct: 57 LVLTCLAEGSWPLEFKWMHNDRELTTYT----SEYKYIIP----SLQRL----DAGFYRC 104
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +F G + + P + P+P+ W
Sbjct: 105 VVRNRMGALLQRRSEVQVAYMG---NFMDADQRKTVSQGHAAVLNLLPIP-SCPRPQVTW 160
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + DSG Y A N + LI +
Sbjct: 161 FREGHKIIPSNRIAITLENQLVILATTVGDSGAYYAQAVNERNGENKTSPLIHLSIARDV 220
Query: 181 SYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I I A + L C A+ + ++ W NGV++
Sbjct: 221 GTPETMAPVIVIPPGNRSVVAGSNEITLECIANARPVEELHVNWKRNGVKV--------- 271
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I + + AD G Y C
Sbjct: 272 TSGLHSFGRRLTIGSPTSADTGLYVC 297
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 25/254 (9%)
Query: 239 DGGLLEITNASFADAGEYEC----VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKT 293
D +LEI N + + VV ++ S++ ++ PP + P + V +T
Sbjct: 1064 DAQMLEIPNLTPYTHYRFRMRQVNVVGASPFSQSSRVIQTLQAPPDVAPTSITVRTASET 1123
Query: 294 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
S ++W D NG P + Y+I R + + V VI ++R E +IE
Sbjct: 1124 SLRLRWVPLPDSQYNGNPESVGYRIGYWRPDLQAP---VLAQVINDRLER-----EFTIE 1175
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L W+ YE ++ A N +G G P S + + T P AP + + ++W
Sbjct: 1176 G-LEEWTEYELQMQAFNAIGAG-PWSETVRGRTRESVPSAAPENVSAEAVSSTQILLTWA 1233
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+P + QN + YKI +R K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1234 LVPEQDQNGLILGYKILFRAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVLYELQVLA 1290
Query: 468 INDVGPG-PESEVV 480
+G G P S ++
Sbjct: 1291 FTRIGNGVPSSPLI 1304
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYTGRKE 344
EV S +QW G+ PI ++ + R W + +VS V+R
Sbjct: 1424 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSVSHEATACAVER------ 1477
Query: 345 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
L P+++Y+ ++ A N++G + S + T D P + PS + +
Sbjct: 1478 ------LRPFTSYKLRLKATNDIGDSDFSGETDAVTTLQDVPGEPPSFVSVTPHTTSSVL 1531
Query: 405 ISWEPLPREKQNAPNIYYKIFWRK 428
I W P E N Y+I++R+
Sbjct: 1532 IQWRPPRDESLNGLLQGYRIYYRE 1555
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP I L ++W+P P E QN
Sbjct: 1608 YELILTAYNIIGESPASAPVEVFVGEA-APAMAPQNIQVTPLTASQLEVTWDPPPPESQN 1666
Query: 417 APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
YK+++ +N+TE F ET VV++ + +T+Y V + A
Sbjct: 1667 GNIQGYKVYYWEAGSQNETEKMKVLFLPET----------VVKLKNLTSHTQYLVSISAF 1716
Query: 469 NDVGPGPES 477
N G GP+S
Sbjct: 1717 NAAGDGPQS 1725
>gi|184185488|gb|ACC68891.1| neural cell adhesion molecule L1 precursor (predicted) [Rhinolophus
ferrumequinum]
Length = 1260
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 203/481 (42%), Gaps = 42/481 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 356 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQHGALILSNVQPS-DTMVTQCE 407
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A EG + C AP P W K
Sbjct: 408 ARNRHGLLLANAYIYVVQL-PAKILTP-DNETYLAVEGSTAYLLCKAFGAPVPSVQWLDK 465
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+G + R + NG L I + +D+G Y C A N L V ++
Sbjct: 466 EGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVKDATQIIQE 525
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLE 244
I R + C A + L + W +G +L EL ++ I+ L
Sbjct: 526 PQNAIEKKGSR-VTFTCQASFDPSLQHSITWRRDG-----RNLQELGDSDKYFIEDERLV 579
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTD 301
I + ++D G Y CV + + + + ++V G PG +++ + H + + W+
Sbjct: 580 IHSLDYSDQGNYSCVASTKLDVVERRAKLLVVGSPGPVPRLELSDHHPPKQNQVQLSWSP 639
Query: 302 GATNGRPITHYKIIARTNWN--STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ PI Y I W+++ + V G + S L P+ Y F
Sbjct: 640 ADDHNSPIEKYDIEFEDQEMEPDKWYSLGK-VPGNQT---------STTLKLSPYVRYTF 689
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP
Sbjct: 690 RVTAINKYGPGEPSPASEPVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQ 749
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
+ Y++ WR + E + V + + + + YE+KVQAIN G GPE +V
Sbjct: 750 VQYRVQWRLQGTRGAWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAINSHGKGPEPQV 804
Query: 480 V 480
Sbjct: 805 T 805
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 182/492 (36%), Gaps = 62/492 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C A G P T W R + + ++ ++ L +R + E D Y+C
Sbjct: 262 LVLECIAEGFPTPTIKWLRPSGPMPPNRVTYQNHNK------TLQLRDVR-EEDDGEYRC 314
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N L + + + V P + +P +S Y G G + C + P+P+ W+ +
Sbjct: 315 VAENSLGSDRHAYYVTV-EAAPYWLHKP-QSRLY-GPGETARLDCQVQGRPQPEVTWRIN 371
Query: 127 GNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
G + + + + ++G L++S V D+ + C A N HG L++ + Y
Sbjct: 372 GIPVEELAKDQKYRIQHGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYVV 424
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
QLP KI + L T LL A+ G + ++ + E + D
Sbjct: 425 QLPAKI-LTPDNETYLAVEGSTAYLLCKAF-----GAPVPSVQWLDKEGKTVLQDERFFP 478
Query: 245 ITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE-----VHK 292
TN + D G Y C + ++ + V+ Q+++ + K
Sbjct: 479 YTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVANLQVK------DATQIIQEPQNAIEK 532
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+ + +T A+ + H W N+ E +G + D+Y E + + L
Sbjct: 533 KGSRVTFTCQASFDPSLQH-----SITWRRDGRNLQE--LG-DSDKYFIEDERLVIHSLD 584
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
+ +A +L E + +P P S K + +SW P
Sbjct: 585 YSDQGNYSCVASTKLDVVERRAKLLVVGSPGPVPRLELS--DHHPPKQNQVQLSWSPA-- 640
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV-GIAVVRIPSEFYYTEYEVKVQAINDV 471
+ N+P Y I + D E + + G V G Y Y +V AIN
Sbjct: 641 DDHNSPIEKYDIEFE---DQEMEPDKWYSLGKVPGNQTSTTLKLSPYVRYTFRVTAINKY 697
Query: 472 GPG---PESEVV 480
GPG P SE V
Sbjct: 698 GPGEPSPASEPV 709
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 115/300 (38%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAM 63
D++ CEA G P+V + W R+G E L + +T N +R
Sbjct: 54 DISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVHQAPHSGSFTITGNNSNFAQRFQGT 113
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 114 YRCFASNKLGTAMSHEIQLMAEGAPKWPKETVKPVEVE----EGESVILPCHPPPSAEPL 169
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 170 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDL 229
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M + + RL+ S + + + L L C A + ++
Sbjct: 230 RVKATNSMIDRRPRLLFPANASSH------LVALQEQTLVLECIAEGFPTPTIKWLRPS- 282
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M N + N N L++ + D GEY CV ++++G V VE P
Sbjct: 283 ----GPMPPNRVTYQNHN---KTLQLRDVREEDDGEYRCVAENSLGSDRHAYYVTVEAAP 335
>gi|339247417|ref|XP_003375342.1| putative fibronectin type III domain protein [Trichinella spiralis]
gi|316971327|gb|EFV55122.1| putative fibronectin type III domain protein [Trichinella spiralis]
Length = 954
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 204/478 (42%), Gaps = 52/478 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL----NPERDPA 62
+ + C A G P ++++NG + + DRY I VLTI+ L + D A
Sbjct: 285 VEFRCNARGKPTPNITFYKNGHKIVPD-------DRYSIDGEVLTIQNLRKAPDGAGDNA 337
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC+A+N +++ L +L+ + P E G+ C +PKPK
Sbjct: 338 VYQCKAENAYGYVWANFYLNILSFPAVILEGPGNREAVVGQRS--VHKCRVFGSPKPKIE 395
Query: 123 WKKDGNIIGSGGRRKIFENGN----LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W+ ++ R N L++ V + + C A+N +G G L+V
Sbjct: 396 WRSP--VLTGALYRYTPLNAEGISELVLYEVDKKHEASFECHASNKYGEASEIGSLVVRG 453
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
++QL C A+ + LL V Y W +G+ +GN+ P+I +
Sbjct: 454 N-----------------SIQLPCKAYHDNLLKVKYTWLIDGIPLGNLQ------PHIKV 490
Query: 239 DGGL-LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT- 296
D L I N +D+ +Y CV ++ + K T++V+ P P V V + +A
Sbjct: 491 DENYTLIIENPKASDSADYTCVAETKLDKAERVATILVKDVPLPPFFVGVTCSERNAAVR 550
Query: 297 IQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
Q D P+ + + +N W H+ V + +I L PW
Sbjct: 551 FQHRDRPRTAAPVESFWVQYNSNDAEPDAW-----HIYPVPVTTRADKDWWTITVPLHPW 605
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ F+ +A NE+G PS S Q T A P P+ + G +L +SW+P+ R
Sbjct: 606 GNFSFRAVARNEVGDSAPSLASTQCTTAAALPELNPANVVVRGTSPDNLVVSWDPVERVD 665
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
N P+ +Y + ++ +D + + ET + + + +P + Y Y+V+VQ+ N +G
Sbjct: 666 WNGPDFHYVVEMKRADDDDSRWETAI-VTDPNESQLVVPDQPTYEPYDVRVQSANSLG 722
>gi|296471082|tpg|DAA13197.1| TPA: L1 cell adhesion molecule isoform 2 [Bos taurus]
Length = 1253
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 209/489 (42%), Gaps = 58/489 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y I L + L P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELGKDQKYRIHHGALVLSNLQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVEL-PAKILTP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDR 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
+G + R + NG L I + +D+G Y C A N D+S ++ + +
Sbjct: 464 EGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAAN----DQSNVTIVANLQVKDATR 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W R +DL EL ++ I+
Sbjct: 520 IMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTW-----RRDALDLQELGDSDKYFIEDE 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG +++ + H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
NAP + Y++ WR +K +Q + + + VV S F YE+KVQ +N
Sbjct: 741 MDWNAPQVQYRVQWRPQKMQGAWQEQIVSD----PFLVVSNTSTF--VPYEIKVQTVNSQ 794
Query: 472 GPGPESEVV 480
G GPE ++
Sbjct: 795 GKGPEPQIT 803
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 189/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LILECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSDRHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + G+ + + +G L++S + D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+LP KI + + T LL A+ G + ++ + E + D
Sbjct: 422 VELPAKI-LTPDNETYMAVQGSTAYLLCKAF-----GAPVPSVQWLDREGKTVLQDERFF 475
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
TN + D G Y C + ++ + V+ + G + + K +
Sbjct: 476 PYTNGTLGIRDLQTNDTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSA-IEKRGSR 534
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H T W ++ E +G + D+Y E + + L
Sbjct: 535 VMFTCQASFDPSLQH-----STTWRRDALDLQE--LG-DSDKYFIEDERLVIHSLDYSDQ 586
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A +L E + +P P S K + +SW P + N
Sbjct: 587 GNYSCVASTKLDVVESRAELLVVGSPGPVPQLELS--DHHLLKQSQVRLSWSPA--DDHN 642
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 643 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 699
Query: 475 --PESEVV 480
P+SE V
Sbjct: 700 PSPDSETV 707
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 115/300 (38%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLN--SETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
D++ CEA G P+V + W R+G L E + +Q + ++ +
Sbjct: 52 DVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSSNFAQSFQGT 111
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 112 YRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVE----EGESVILPCHPPPSAEPL 167
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 168 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDL 227
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M + K L+ S + + + L L C A + ++
Sbjct: 228 RVKATNSMMDRKPHLLFPTNSSSH------LVALQGQPLILECIAEGFPTPTIKWLRPS- 280
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 281 ----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAP 333
>gi|300794021|ref|NP_001179364.1| neural cell adhesion molecule L1 precursor [Bos taurus]
gi|296471081|tpg|DAA13196.1| TPA: L1 cell adhesion molecule isoform 1 [Bos taurus]
Length = 1257
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 209/489 (42%), Gaps = 58/489 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y I L + L P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELGKDQKYRIHHGALVLSNLQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVEL-PAKILTP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDR 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
+G + R + NG L I + +D+G Y C A N D+S ++ + +
Sbjct: 464 EGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAAN----DQSNVTIVANLQVKDATR 519
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W R +DL EL ++ I+
Sbjct: 520 IMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTW-----RRDALDLQELGDSDKYFIEDE 574
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG +++ + H ++ +
Sbjct: 575 RLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLS 634
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 635 WSPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 680
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 681 PYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRW 740
Query: 413 EKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
NAP + Y++ WR +K +Q + + + VV S F YE+KVQ +N
Sbjct: 741 MDWNAPQVQYRVQWRPQKMQGAWQEQIVSD----PFLVVSNTSTF--VPYEIKVQTVNSQ 794
Query: 472 GPGPESEVV 480
G GPE ++
Sbjct: 795 GKGPEPQIT 803
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 189/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 260 LILECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSDRHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + G+ + + +G L++S + D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+LP KI + + T LL A+ G + ++ + E + D
Sbjct: 422 VELPAKI-LTPDNETYMAVQGSTAYLLCKAF-----GAPVPSVQWLDREGKTVLQDERFF 475
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
TN + D G Y C + ++ + V+ + G + + K +
Sbjct: 476 PYTNGTLGIRDLQTNDTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSA-IEKRGSR 534
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H T W ++ E +G + D+Y E + + L
Sbjct: 535 VMFTCQASFDPSLQH-----STTWRRDALDLQE--LG-DSDKYFIEDERLVIHSLDYSDQ 586
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A +L E + +P P S K + +SW P + N
Sbjct: 587 GNYSCVASTKLDVVESRAELLVVGSPGPVPQLELS--DHHLLKQSQVRLSWSPA--DDHN 642
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 643 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 699
Query: 475 --PESEVV 480
P+SE V
Sbjct: 700 PSPDSETV 707
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 115/300 (38%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLN--SETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
D++ CEA G P+V + W R+G L E + +Q + ++ +
Sbjct: 52 DVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSSNFAQSFQGT 111
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 112 YRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVE----EGESVILPCHPPPSAEPL 167
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 168 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDL 227
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M + K L+ S + + + L L C A + ++
Sbjct: 228 RVKATNSMMDRKPHLLFPTNSSSH------LVALQGQPLILECIAEGFPTPTIKWLRPS- 280
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 281 ----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAP 333
>gi|296471083|tpg|DAA13198.1| TPA: L1 cell adhesion molecule isoform 3 [Bos taurus]
Length = 1248
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 209/489 (42%), Gaps = 58/489 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y I L + L P D + QC
Sbjct: 349 CQVQGRPQPEVTWRING-------IPVEELGKDQKYRIHHGALVLSNLQPS-DTMVTQCE 400
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L P+ P ++ETY A +G + C AP P W +
Sbjct: 401 ARNRHGLLLANAYIYVVEL-PAKILTP-DNETYMAVQGSTAYLLCKAFGAPVPSVQWLDR 458
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSY 182
+G + R + NG L I + +D+G Y C A N D+S ++ + +
Sbjct: 459 EGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAAN----DQSNVTIVANLQVKDATR 514
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGG 241
Q P + C A + L + W R +DL EL ++ I+
Sbjct: 515 IMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTW-----RRDALDLQELGDSDKYFIEDE 569
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQ 298
L I + ++D G Y CV + + + ++ ++V G PG +++ + H ++ +
Sbjct: 570 RLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLS 629
Query: 299 WTDGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
W+ + PI Y I +A W S +GK + S L
Sbjct: 630 WSPADDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLS 675
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+ Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 676 PYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRW 735
Query: 413 EKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
NAP + Y++ WR +K +Q + + + VV S F YE+KVQ +N
Sbjct: 736 MDWNAPQVQYRVQWRPQKMQGAWQEQIVSD----PFLVVSNTSTF--VPYEIKVQTVNSQ 789
Query: 472 GPGPESEVV 480
G GPE ++
Sbjct: 790 GKGPEPQIT 798
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 189/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ LN E D Y+
Sbjct: 255 LILECIAEGFPTPTIKWLRP-----SGPMP---ADRVTYQNHNKTLQLLNVGEEDDGEYR 306
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 307 CLAENSLGSDRHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 363
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + G+ + + +G L++S + D+ + C A N HG L++ + Y
Sbjct: 364 NGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHG-------LLLANAYIYV 416
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+LP KI + + T LL A+ G + ++ + E + D
Sbjct: 417 VELPAKI-LTPDNETYMAVQGSTAYLLCKAF-----GAPVPSVQWLDREGKTVLQDERFF 470
Query: 244 EITNASFA-------DAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
TN + D G Y C + ++ + V+ + G + + K +
Sbjct: 471 PYTNGTLGIRDLQTNDTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSA-IEKRGSR 529
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + H T W ++ E +G + D+Y E + + L
Sbjct: 530 VMFTCQASFDPSLQH-----STTWRRDALDLQE--LG-DSDKYFIEDERLVIHSLDYSDQ 581
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A +L E + +P P S K + +SW P + N
Sbjct: 582 GNYSCVASTKLDVVESRAELLVVGSPGPVPQLELS--DHHLLKQSQVRLSWSPA--DDHN 637
Query: 417 APNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
AP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 638 APIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 694
Query: 475 --PESEVV 480
P+SE V
Sbjct: 695 PSPDSETV 702
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 115/300 (38%), Gaps = 44/300 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLN--SETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
D++ CEA G P+V + W R+G L E + +Q + ++ +
Sbjct: 47 DVSLKCEASGKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSSNFAQSFQGT 106
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKK---RPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y+C A N+L T S + P + K +P+E E EG +V + C+P + +P
Sbjct: 107 YRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVE----EGESVILPCHPPPSAEPL 162
Query: 121 FVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA---------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 163 RIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDL 222
Query: 162 --TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
+ M + K L+ S + + + L L C A + ++
Sbjct: 223 RVKATNSMMDRKPHLLFPTNSSSH------LVALQGQPLILECIAEGFPTPTIKWLRPS- 275
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 276 ----GPMPADRVTYQNHN---KTLQLLNVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAP 328
>gi|339247401|ref|XP_003375334.1| putative fibronectin type III domain protein [Trichinella spiralis]
gi|316971331|gb|EFV55124.1| putative fibronectin type III domain protein [Trichinella spiralis]
Length = 1151
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 204/478 (42%), Gaps = 52/478 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL----NPERDPA 62
+ + C A G P ++++NG + + DRY I VLTI+ L + D A
Sbjct: 298 VEFRCNARGKPTPNITFYKNGHKIVPD-------DRYSIDGEVLTIQNLRKAPDGAGDNA 350
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+YQC+A+N +++ L +L+ + P E G+ C +PKPK
Sbjct: 351 VYQCKAENAYGYVWANFYLNILSFPAVILEGPGNREAVVGQRS--VHKCRVFGSPKPKIE 408
Query: 123 WKKDGNIIGSGGRRKIFENGN----LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
W+ ++ R N L++ V + + C A+N +G G L+V
Sbjct: 409 WRSP--VLTGALYRYTPLNAEGISELVLYEVDKKHEASFECHASNKYGEASEIGSLVV-- 464
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
++QL C A+ + LL V Y W +G+ +GN+ P+I +
Sbjct: 465 ---------------RGNSIQLPCKAYHDNLLKVKYTWLIDGIPLGNLQ------PHIKV 503
Query: 239 DGGL-LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT- 296
D L I N +D+ +Y CV ++ + K T++V+ P P V V + +A
Sbjct: 504 DENYTLIIENPKASDSADYTCVAETKLDKAERVATILVKDVPLPPFFVGVTCSERNAAVR 563
Query: 297 IQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
Q D P+ + + +N W H+ V + +I L PW
Sbjct: 564 FQHRDRPRTAAPVESFWVQYNSNDAEPDAW-----HIYPVPVTTRADKDWWTITVPLHPW 618
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ F+ +A NE+G PS S Q T A P P+ + G +L +SW+P+ R
Sbjct: 619 GNFSFRAVARNEVGDSAPSLASTQCTTAAALPELNPANVVVRGTSPDNLVVSWDPVERVD 678
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
N P+ +Y + ++ +D + + ET + + + +P + Y Y+V+VQ+ N +G
Sbjct: 679 WNGPDFHYVVEMKRADDDDSRWETAI-VTDPNESQLVVPDQPTYEPYDVRVQSANSLG 735
>gi|47220665|emb|CAG06587.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2095
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 203/491 (41%), Gaps = 44/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P W+++ ++ P++ + L + L P+ D M+QC A+N
Sbjct: 170 CQARGTPQPDIVWYKDALPID----PVKMLRYRVLVGGSLQVNGLLPD-DTGMFQCFARN 224
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
++ L V ++ P+ P S++ +G ++ + C AP+P W+K ++
Sbjct: 225 VAGEVQTNTYLAVTSIAPNITAGP--SDSTVIDGMSIILHCETSGAPRPAITWQKGERVL 282
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C A+N G+DE+ L+V +
Sbjct: 283 ASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEAAADLVVW-ARTRITTP 341
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + V +IW G I N P + D G L I
Sbjct: 342 PQDQSVIKGTKAFMTCGVTHDPSVTVKHIWEKEGTAI-----NVQAIPRMRTDPDGTLHI 396
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVE------------GPPGLPGGVQVVEVHKT 293
+ D G Y C V S G S + V PP P V + K
Sbjct: 397 SQTWSGDIGTYTCRVTSVGGNDSRSAHLRVSCPVPPYPRRQLPHPPENPTAV-LSTSEKR 455
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353
+ + W P+ Y + N N+ W + + + E ++ N L+P
Sbjct: 456 AINLAWAKPFDGNSPLIRYILEVSEN-NAPWAILLASIEPEST-------EVTV-NGLIP 506
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
+Y+F++ A N++G G+ S + + + P + P P + G + I W+P P
Sbjct: 507 ARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSIMIQWQPPPES 566
Query: 414 KQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
QN Y + +R ++Q LK + + + + +T YE++V A N G
Sbjct: 567 HQNGILRGYVVRYRLTGLPVDYQ---LKNISSPDVTNLLLEDLIIWTNYEIEVAAFNGAG 623
Query: 473 PGPESEVVTIW 483
G S VT W
Sbjct: 624 LGAFSHKVTEW 634
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 110/269 (40%), Gaps = 25/269 (9%)
Query: 5 ADLTWTCEAFGVPDVTYS--WFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++T C A P + S W +NG L++ L D R LTI + D
Sbjct: 71 SEVTMECVANARPLIKLSIVWRKNGVLVSGG---LSDFSRR------LTI-FGPALSDAG 120
Query: 63 MYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y+C A + + + + A L V P F K P E A V I C P+P
Sbjct: 121 YYECEAILRSSSVPSVSAGAYLHVYE-PPQFIKEP-EKHITAEMEKVVDIPCQARGTPQP 178
Query: 120 KFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
VW KD I R ++ G+L ++ + DD+G++ C A NV G ++ L V
Sbjct: 179 DIVWYKDALPIDPVKMLRYRVLVGGSLQVNGLLPDDTGMFQCFARNVAGEVQTNTYLAVT 238
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
P T+ ++ L C T A W G R+ + ++ P
Sbjct: 239 SIAPNITAGPSDSTVIDGMSIILHC--ETSGAPRPAITW-QKGERV--LASGSVQLPRFT 293
Query: 238 -IDGGLLEITNASFADAGEYECVVKSTVG 265
++ G L I+ + +DAG Y C+ ++ G
Sbjct: 294 LLESGSLLISPSHISDAGTYTCMASNSRG 322
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 48/242 (19%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR----TNWNSTWFNVSEHVIG 333
PP P V EV + W G+ P+ +Y + R +NW+ +VS
Sbjct: 1281 PPSRPV-VPQKEVQARQVLLSWEPGSDGLSPVRYYTVQLRELPESNWSVHSASVSHEATS 1339
Query: 334 KEVDRYTGRKEA---------------SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 378
V R +E+ + + L P+++Y+F+V A N++G E S+ S
Sbjct: 1340 YIVSRLLLTQESRWRLGPSAGVPHPPSASSDRLKPFTSYQFRVKATNDIGDSEYSAESEA 1399
Query: 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 438
T D P + P+ + + I W+P EK N + ++I +R E +
Sbjct: 1400 ITTLQDAPDEVPAILSVTPHTTTSVLICWKPPSEEKINGILLGFRIRYR-----ELLYDR 1454
Query: 439 LKEYGNVGIAVVRIPSEFY-----------------------YTEYEVKVQAINDVGPGP 475
L+ Y I+ + ++ + YE+++ N VG GP
Sbjct: 1455 LRGYSAHAISSISAWADLSAPYSIRNLTDSSLIQYELDKLSKHKRYEIRMSVYNAVGEGP 1514
Query: 476 ES 477
S
Sbjct: 1515 SS 1516
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 121/317 (38%), Gaps = 79/317 (24%)
Query: 220 GVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTK 270
G RI + N T PN+ ++ GL +T + AG + S + +
Sbjct: 776 GYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAG-----MTSKGQGLLSS 830
Query: 271 TTVIVEGPPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTW 324
+T+ PP LPG + + + S T+Q+ G I+ +++ A+ N W
Sbjct: 831 STISSGVPPELPGPPTNLAISNIGPRSVTLQFKPGYDGKTSISRWQVEAQVGVVGENEDW 890
Query: 325 FNVSEHVIGKEVDR-------------YTGRKEASIEN-------VLVPWST-----YEF 359
V H + E + Y ++ ++ V+ P T + F
Sbjct: 891 VMV--HQVSNEPEARSLEVPGLNPYTAYRSQRPVQLDQNPFGFAYVIAPVVTTMPRPFRF 948
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN--A 417
++ N +G PS PS + T P AP+ + L + W PLP + N A
Sbjct: 949 RMHQVNIVGSSPPSQPSRKIQTLPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYNGNA 1008
Query: 418 PNIYYKIFWRK--------------KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463
+ Y++ + + + + EF E L+E+ EYEV
Sbjct: 1009 EQVGYRVQYSRAGAPSRPLIHIITDRQEREFTIEDLEEW----------------MEYEV 1052
Query: 464 KVQAINDVGPGPESEVV 480
+VQA+N +G GP S+ V
Sbjct: 1053 RVQALNGIGAGPWSQPV 1069
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P P + L ++W+P P + QN
Sbjct: 1500 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQN 1558
Query: 417 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YK+ FW ++KN+TE ++ + E G V++ + YT Y + V N G
Sbjct: 1559 GDIQGYKVYFWEFQRKNETERLRTLFMPEGG------VKLKNLTGYTTYMISVAPFNAAG 1612
Query: 473 PGPES 477
GP S
Sbjct: 1613 DGPRS 1617
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
+ T+ TI W+ G PIT Y I AR + W ++ I KEV +T + + V
Sbjct: 1752 YGTALTIHWSSGDPGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSHTFNLDILKQGV 1810
Query: 351 LVPWSTYEFKVIAGNELGYGEP 372
TY+F+VIA N+ GYG P
Sbjct: 1811 -----TYDFRVIAVNDYGYGSP 1827
>gi|350398908|ref|XP_003485347.1| PREDICTED: Down syndrome cell adhesion molecule-like protein
CG42256-like [Bombus impatiens]
Length = 1890
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 219/512 (42%), Gaps = 50/512 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++A +T T + +P + +SW ++GE L S +L +E++ F ++L + L+ R
Sbjct: 554 SRAQVTCTVTSGDLP-IYFSWLKDGEPLPS-SLRIEERVAEFF--SLLVFKELS-SRHSG 608
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N +A+L ++ + P + P + T G NV C + P P+
Sbjct: 609 KYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQDVATLLGNPLNV--HCEAKGFPPPRVT 665
Query: 123 W----KKDGN-----IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W ++ N + GS GR I NG+L + D G Y C A N G SK
Sbjct: 666 WLRARERTSNDYQPLVDGSDGRLTILPNGSLWTASAGPQDEGHYLCRANNGIGSGLSKVI 725
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ +H P+ +E +TI ++ L C+ + ++V W HN R+ + + + L
Sbjct: 726 YVSVHEPARFEFQSKNVTIRRGESVTLDCTVIGDNPIEVQ--WMHNSDRL-DTNSHRLSI 782
Query: 234 PNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I D GL L I ++ D+G Y C + G+ + V+ P P ++V+E+
Sbjct: 783 SQIKTDNGLKSQLSIASSDRQDSGVYRCTADNAYGRSEHLIYLAVQERPDPPASLEVIEI 842
Query: 291 HKTSATIQWTDGATNGRPITHYKIIART-------NWNSTWFNVSEHVIGKE-------- 335
S + W PI +Y I R+ +WN + + G
Sbjct: 843 GSRSIRLLWKRAFDGNSPIRNYVIQYRSLNHGLADDWNPAKTHNVTYTPGSSNNGNNIHP 902
Query: 336 -------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
+ + +E ++ L P TY F++ A N + P+ P T + P +
Sbjct: 903 TQNGLSPFETTSDDQEVALVGGLHPAVTYTFRIFAINSIDVSVPTDPV-VAKTQEEAPTE 961
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---QSETLKEYGNV 445
P I G+L +SW+P P+E N + Y + W + + + QS++L G
Sbjct: 962 PPQNIKVQSAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSSTSGVNQSKSLTVNG-W 1020
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
V++ +T+Y++ ++A N + GP S
Sbjct: 1021 ATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 1052
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 34/294 (11%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ +D+ TC A G P ++W+R+ +N ++P+E R + +++ IR ++ + D
Sbjct: 264 ESGSDVHLTCSAQGTPPPQFTWYRD---VNGHSIPVESFGRIQLWGDLMQIRRVDAQ-DA 319
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y CRA NQ+ + + L V T K + + +P +GE + T+ C E P
Sbjct: 320 GRYICRASNQVGEQRAETHLSV-TSKLNARIQPRVQIINSGE--SATMNCTVEGYPVESV 376
Query: 122 VWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT----NVHGMDESK-GRL 174
W DG + R ++ L+I V R D G+Y C N E K G
Sbjct: 377 EWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRKDKGMYQCLVRSDKENAQATAELKLGDT 436
Query: 175 IVLHGPSYYEQL----PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ ++ EQ PP + LRCSA ++ W +G + +
Sbjct: 437 VPELQYTFIEQALRPGPP---------VSLRCSATGSP--PPSFTWLLDGEPLSEIASGH 485
Query: 231 LETPNINIDG-----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D L I++A D G Y CV +T+ + K + + GPP
Sbjct: 486 RYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNIYGPP 539
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 25/284 (8%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T C G P + W +G L +D + VL I + +D MYQC
Sbjct: 363 TMNCTVEGYPVESVEWLHDG----VPVLTAQDTRIRLLAPLVLVIGSVG-RKDKGMYQCL 417
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
++ + ++A+L++ P + +E G V++ C+ +P P F W DG
Sbjct: 418 VRSDKENAQATAELKLGDTVPELQYTFIEQALRPGP--PVSLRCSATGSPPPSFTWLLDG 475
Query: 128 ---NIIGSGGRRKIFE----NGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+ I SG R I + +G+++ IS +D G+Y+C A N E K RL +
Sbjct: 476 EPLSEIASGHRYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNI 535
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPN 235
+GP + Q+ C+ + + L + + W +G + ++ + E
Sbjct: 536 -YGPPVMSPFNFPSNLQEGSRAQVTCTVTSGD-LPIYFSWLKDGEPLPSSLRIEE----R 589
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ LL S +G+Y CV ++ K++ ++V+ PP
Sbjct: 590 VAEFFSLLVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 633
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 22 SWFRNGELLNSETLP--LEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQL---KTR 75
SWFR+ +L LP + R+ + L IR PE A Y C + L + R
Sbjct: 179 SWFRDDAIL----LPGSTDTGGRFVVTSQGDLHIRAARPEDGRATYSCLTFHALTGERRR 234
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYA---GEGGNVTIFCNPEAAPKPKFVWKKDGN---- 128
A L V S R ++ A G +V + C+ + P P+F W +D N
Sbjct: 235 SEPATLTVAEPTGSMPPRLMQRSQIAISAESGSDVHLTCSAQGTPPPQFTWYRDVNGHSI 294
Query: 129 IIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ S GR +++ G+L+ I V D+G Y C A+N G ++ L V ++
Sbjct: 295 PVESFGRIQLW--GDLMQIRRVDAQDAGRYICRASNQVGEQRAETHLSVTS--KLNARIQ 350
Query: 188 PKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P++ I + + + C+ + V W H+GV + L +T + +L I
Sbjct: 351 PRVQIINSGESATMNCTVEGYPVESVE--WLHDGVPV----LTAQDTRIRLLAPLVLVIG 404
Query: 247 NASFADAGEYECVVKS 262
+ D G Y+C+V+S
Sbjct: 405 SVGRKDKGMYQCLVRS 420
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 102/289 (35%), Gaps = 33/289 (11%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLP-----LEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+C A G P +W + + + +P L + YF + E A Y
Sbjct: 63 SCSAHGSPTPHVTWITSPDQRSVTAVPGLRQLLGNGTLYFPP---FLAQDFRAEVHNARY 119
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV- 122
+CRA + + T S LR + P + R S EG N + C K
Sbjct: 120 RCRATSSVGTVLSREVTLRAVLTVPGYDVRVNRSPVV--EGCNAVLSCTAREDVKEHLTV 177
Query: 123 --WKKDGNII-----GSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRL 174
W +D I+ +GGR + G+L I +D YSC + + +
Sbjct: 178 TSWFRDDAILLPGSTDTGGRFVVTSQGDLHIRAARPEDGRATYSCLTFHALTGERRRSEP 237
Query: 175 IVLHGPSYYEQLPPK------ITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L +PP+ I I+A ++ L CSA + NG I
Sbjct: 238 ATLTVAEPTGSMPPRLMQRSQIAISAESGSDVHLTCSAQGTPPPQFTWYRDVNGHSIPVE 297
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I + G L++I DAG Y C + VG+ +T + V
Sbjct: 298 SFGR-----IQLWGDLMQIRRVDAQDAGRYICRASNQVGEQRAETHLSV 341
>gi|340712210|ref|XP_003394656.1| PREDICTED: Down syndrome cell adhesion molecule-like protein
CG42256-like [Bombus terrestris]
Length = 1992
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 219/512 (42%), Gaps = 50/512 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++A +T T + +P + +SW ++GE L S +L +E++ F ++L + L+ R
Sbjct: 644 SRAQVTCTVTSGDLP-IYFSWLKDGEPLPS-SLRIEERVAEFF--SLLVFKELS-SRHSG 698
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N +A+L ++ + P + P + T G NV C + P P+
Sbjct: 699 KYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQDVATLLGNPLNV--HCEAKGFPPPRVT 755
Query: 123 W----KKDGN-----IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W ++ N + GS GR I NG+L + D G Y C A N G SK
Sbjct: 756 WLRARERTSNDYQPLVDGSDGRLTILPNGSLWTASAGPQDEGHYLCRANNGIGSGLSKVI 815
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ +H P+ +E +TI ++ L C+ + ++V W HN R+ + + + L
Sbjct: 816 YVSVHEPARFEFQSKNVTIRRGESVTLDCTVIGDNPIEVQ--WMHNSDRL-DTNSHRLSI 872
Query: 234 PNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I D GL L I ++ D+G Y C + G+ + V+ P P ++V+E+
Sbjct: 873 SQIKTDNGLKSQLSIASSDRQDSGVYRCTADNAYGRSEHLIYLAVQERPDPPASLEVIEI 932
Query: 291 HKTSATIQWTDGATNGRPITHYKIIART-------NWNSTWFNVSEHVIGKE-------- 335
S + W PI +Y I R+ +WN + + G
Sbjct: 933 GSRSIRLLWKRAFDGNSPIRNYVIQYRSLNHGLADDWNPAKTHNVTYTPGSSNNGNNIHP 992
Query: 336 -------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
+ + +E ++ L P TY F++ A N + P+ P T + P +
Sbjct: 993 TQNGLSPFETTSDDQEVALVGGLHPAVTYTFRIFAINSIDVSVPTDPV-VAKTQEEAPTE 1051
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---QSETLKEYGNV 445
P I G+L +SW+P P+E N + Y + W + + + QS++L G
Sbjct: 1052 PPQNIKVQSAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSSTSGVNQSKSLTVNG-W 1110
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
V++ +T+Y++ ++A N + GP S
Sbjct: 1111 ATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 1142
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 34/294 (11%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ +D+ TC A G P ++W+R+ +N ++P+E R + +++ IR ++ + D
Sbjct: 264 ESGSDVHLTCSAQGTPPPQFTWYRD---VNGHSIPVESFGRIQLWGDLMQIRRVDAQ-DA 319
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y CRA NQ+ + + L V T K + + +P +GE + T+ C E P
Sbjct: 320 GRYICRASNQVGEQRAETHLSV-TSKLNARIQPRVQIINSGE--SATMNCTVEGYPVESV 376
Query: 122 VWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT----NVHGMDESK-GRL 174
W DG + R ++ L+I V R D G+Y C N E K G
Sbjct: 377 EWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRKDKGMYQCLVRSDKENAQATAELKLGDT 436
Query: 175 IVLHGPSYYEQL----PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ ++ EQ PP + LRCSA ++ W +G + +
Sbjct: 437 VPELQYTFIEQALRPGPP---------VSLRCSATGSP--PPSFTWLLDGEPLSEIASGH 485
Query: 231 LETPNINIDG-----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D L I++A D G Y CV +T+ + K + + GPP
Sbjct: 486 RYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNIYGPP 539
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 111/278 (39%), Gaps = 22/278 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY----FIQDNVLTIRYLNPE----RDPA 62
C A G P +++W +GE L+ + RY ++ + I +LN D
Sbjct: 459 CSATGSPPPSFTWLLDGEPLSE----IASGHRYAIGQYVDQSGDVISHLNISSAGAEDGG 514
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+Y C A N L T A+L + P + + AG + TI C P
Sbjct: 515 LYACVAANTLATVEHKARLNIY--GPPYIRSIGPVRAIAGV--DTTIACPYSGYPITSVE 570
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
W + G + R ++ G+L I+ V +D+GIY+C G S+ + + P
Sbjct: 571 WSRGGVALPLDIRHRVDSEGHLTIANVDPNDAGIYTCMVKARSGETASRDIRLTVSSPPV 630
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGG 241
+ Q+ C+ + + L + + W +G + ++ + E +
Sbjct: 631 MSPFNFPSNLQEGSRAQVTCTVTSGD-LPIYFSWLKDGEPLPSSLRIEE----RVAEFFS 685
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
LL S +G+Y CV ++ K++ ++V+ PP
Sbjct: 686 LLVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 723
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 22 SWFRNGELLNSETLP--LEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQL---KTR 75
SWFR+ +L LP + R+ + L IR PE A Y C + L + R
Sbjct: 179 SWFRDDAIL----LPGSTDTGGRFVVTSQGDLHIRAARPEDGRATYSCLTFHALTGERRR 234
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYA---GEGGNVTIFCNPEAAPKPKFVWKKDGN---- 128
A L V S R ++ A G +V + C+ + P P+F W +D N
Sbjct: 235 SEPATLTVAEPTGSMPPRLMQRSQIAISAESGSDVHLTCSAQGTPPPQFTWYRDVNGHSI 294
Query: 129 IIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ S GR +++ G+L+ I V D+G Y C A+N G ++ L V ++
Sbjct: 295 PVESFGRIQLW--GDLMQIRRVDAQDAGRYICRASNQVGEQRAETHLSVTS--KLNARIQ 350
Query: 188 PKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P++ I + + + C+ + V W H+GV + L +T + +L I
Sbjct: 351 PRVQIINSGESATMNCTVEGYPVESVE--WLHDGVPV----LTAQDTRIRLLAPLVLVIG 404
Query: 247 NASFADAGEYECVVKS 262
+ D G Y+C+V+S
Sbjct: 405 SVGRKDKGMYQCLVRS 420
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 14/203 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C G P + W R G LPL+ + R + + LTI ++P D +Y
Sbjct: 554 DTTIACPYSGYPITSVEWSRGG-----VALPLDIRHRVDSEGH-LTIANVDPN-DAGIYT 606
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWK 124
C K + +S +R+ P P + EG + C + P F W
Sbjct: 607 CMVKAR-SGETASRDIRLTVSSPPVMS-PFNFPSNLQEGSRAQVTCTVTSGDLPIYFSWL 664
Query: 125 KDGNIIGSGGR--RKIFENGNLLI-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
KDG + S R ++ E +LL+ +S SG Y+C ATN L+V P
Sbjct: 665 KDGEPLPSSLRIEERVAEFFSLLVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPPQ 724
Query: 182 YYEQLPPKITIAAHRNLQLRCSA 204
+ + P + L + C A
Sbjct: 725 WIFE-PQDVATLLGNPLNVHCEA 746
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 102/289 (35%), Gaps = 33/289 (11%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLP-----LEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+C A G P +W + + + +P L + YF + E A Y
Sbjct: 63 SCSAHGSPTPHVTWITSPDQRSVTAVPGLRQLLGNGTLYFPP---FLAQDFRAEVHNARY 119
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV- 122
+CRA + + T S LR + P + R S EG N + C K
Sbjct: 120 RCRATSSVGTVLSREVTLRAVLTVPGYDVRVNRSPVV--EGCNAVLSCTAREDVKEHLTV 177
Query: 123 --WKKDGNII-----GSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRL 174
W +D I+ +GGR + G+L I +D YSC + + +
Sbjct: 178 TSWFRDDAILLPGSTDTGGRFVVTSQGDLHIRAARPEDGRATYSCLTFHALTGERRRSEP 237
Query: 175 IVLHGPSYYEQLPPK------ITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L +PP+ I I+A ++ L CSA + NG I
Sbjct: 238 ATLTVAEPTGSMPPRLMQRSQIAISAESGSDVHLTCSAQGTPPPQFTWYRDVNGHSIPVE 297
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I + G L++I DAG Y C + VG+ +T + V
Sbjct: 298 SFGR-----IQLWGDLMQIRRVDAQDAGRYICRASNQVGEQRAETHLSV 341
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 106 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 165
++T+ C P P+ +W + + +G ++ +G+L I + + +G Y+C+A+N+
Sbjct: 1376 SITLSCLVVGNPTPRPIWTYRNSQVSTGRHYELTADGHLNIRGLEQSVAGNYTCSASNLF 1435
Query: 166 GMDESKGRLIVLHGP 180
G D L+V+ P
Sbjct: 1436 GDDSITYTLVVVMPP 1450
>gi|196010355|ref|XP_002115042.1| hypothetical protein TRIADDRAFT_59150 [Trichoplax adhaerens]
gi|190582425|gb|EDV22498.1| hypothetical protein TRIADDRAFT_59150 [Trichoplax adhaerens]
Length = 1451
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 212/482 (43%), Gaps = 33/482 (6%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
Q++ W C A G +TY WF NG +++ +Y + N + + D +
Sbjct: 332 QSEFRWPCIASG-SSITYLWFANGN-------EIKNNSKYSVFPNGNLVISSVTKDDSKI 383
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+ C AKN S +L V++ P F + ++T+ ++ + C P+P +
Sbjct: 384 FTCIAKNNFDNIASYGRLNVISSSPKFISSVM-AQTFFLHTTDI-LQCAVFGGPRPDMEY 441
Query: 124 KKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+D N I + R+ + ++NGNL + V +D G+Y C A N HG ++V +
Sbjct: 442 YRDTNYINTTNRKFEKYQNGNLKLHDVVLEDQGVYRCMARNSHGESSKLINVVVRNQTIL 501
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
++ I + + L CS + L + W + V + N + + +I+ L
Sbjct: 502 SINSSKEVLIRRYYSFALTCSVTKDARLLMQLEWRKDDVNLSN--CSGIIIYHISPLVSL 559
Query: 243 LEITNASFADAGEYECVVKSTVGK-----ISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
L ++NA+F G Y C+VK + I+ KT +IV P + E+ S I
Sbjct: 560 LTVSNATFNYTGIYSCIVKLYDDRFLNKYIANKTKLIVVDIPDPVRNITYHELTAKSVFI 619
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W G+ N +P+ + ++ + N N+T F V+ I ++ T + S PW+ Y
Sbjct: 620 SWVPGSENFKPLIRFIVLYQVN-NNTSFKVANPDISPNMN--TAKLNLS------PWNRY 670
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK-IGD-LSISWEPLPREKQ 415
V+A N +G + S+ + T P P+ + G K + D +S+ W PLPRE
Sbjct: 671 RITVVAENGVGRSK-SNQIIELQTKGSVPIYLPNIVRATGSKSMPDVISVRWTPLPREYH 729
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
P I Y + +++++ + ++ + + + S YEV++Q N G G
Sbjct: 730 CGPGIQYFLLHKERDNRGQKYTRIRLLSHYQTMIHGLRSNII---YEVRMQTKNYYGEGN 786
Query: 476 ES 477
S
Sbjct: 787 MS 788
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 16/192 (8%)
Query: 107 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG--NLLISPVSRDDSGIYSCTATNV 164
V + C P P W + G + R +EN L++ V+ DS Y C + NV
Sbjct: 244 VVLDCIAVGRPLPLIYWDRSGGPLPFD--RYNYENNGRRLILKTVTSKDSDRYRCHSRNV 301
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
+G D +L V P + + + C A + Y+W NG I
Sbjct: 302 YGEDTVIYKLQVERRPQWISPVRDVFVAVQQSEFRWPCIASGSS---ITYLWFANGNEIK 358
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST--KTTVIVEGPPGLP 282
N + PN G L I++ + D+ + C+ K+ I++ + VI P +
Sbjct: 359 NNSKYSV-FPN-----GNLVISSVTKDDSKIFTCIAKNNFDNIASYGRLNVISSSPKFIS 412
Query: 283 GGV-QVVEVHKT 293
+ Q +H T
Sbjct: 413 SVMAQTFFLHTT 424
>gi|134085228|emb|CAM60094.1| nadl1.1 [Danio rerio]
Length = 1125
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 206/496 (41%), Gaps = 59/496 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCR 67
C+A G+P +W NG +P+ D R + L + + D A+YQC
Sbjct: 359 CQADGIPAPNITWSING-------VPVSGTDVDPRRRVSSGKLILSNVE-FSDTAVYQCE 410
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
A N+ + + + ++ L P+ P E A G V + C +P PK W+
Sbjct: 411 AVNKHGSILINTHVHIVEL-PAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILD 469
Query: 128 NIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGPSYY 183
+I S + NG+L IS VS +DS Y+C+ + + ++ ++ + GP
Sbjct: 470 SIPALSNAKISQMTNGSLKISNVSEEDSNRYTCSVSETNKSISAELEVLNRTKIVGP--- 526
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRI----GNMDLNELETPNINI 238
P + + + L C + L + W +G +I N +E+E
Sbjct: 527 ---PQNLHVIRGSDAILHCKYTVDHNLKSPTVQWKKDGHKITASTSNDKYHEIE------ 577
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L++ + D G Y C V +T+ + + V+ P P +++ E + S TI
Sbjct: 578 --GSLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITVQDKPDPPQSLKLSEKMERSVTIS 635
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE--ASIENVLVPWST 356
W N P+T Y I N E + +Y + +E L P+S
Sbjct: 636 WMPSVENNSPVTEYVI---------EMNEGETPDEGQWQKYRSVSQDIRQLEIHLQPYSK 686
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
Y F++ A N +G PS S Y+ PA KP + P + + ISW+ + R + N
Sbjct: 687 YHFQIRAVNSIGTSAPSEFSLSYSIPAAKPDRNPENVMTLSTDPKSMIISWQEMDRRQFN 746
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
P YK+FWR+ D S +V + + + + +E+KVQA+ND+G PE
Sbjct: 747 GPGFQYKVFWRRAAD----SGAHWTESSVSNPPLLVNNTGTFVSFEIKVQAVNDLGAAPE 802
Query: 477 SEVVTIWHDPLVIISY 492
PL +I Y
Sbjct: 803 ---------PLTVIGY 809
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 18/255 (7%)
Query: 25 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 84
R+G L + + + +D Y + + + P+ ++Y + + +K R R
Sbjct: 193 RDGNLYFANLIANDSRDDYTCNAHYINASIILPKEPMSIYVTPSNSVVKNR------RAK 246
Query: 85 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 144
P+ + S G +T+ C PE P P+ W + + + +K++ N L
Sbjct: 247 LHHPAGAR----SSYLVLRGQTLTLECIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWL 302
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
I V D G Y CTA N + + V P Y+ + P + A ++L C A
Sbjct: 303 QIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAP-YWTRRPEEHLYAPGETVRLDCQA 361
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
++ W+ NGV + D++ P + G L ++N F+D Y+C +
Sbjct: 362 DGIPAPNIT--WSINGVPVSGTDVD----PRRRVSSGKLILSNVEFSDTAVYQCEAVNKH 415
Query: 265 GKISTKTTV-IVEGP 278
G I T V IVE P
Sbjct: 416 GSILINTHVHIVELP 430
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 196/510 (38%), Gaps = 89/510 (17%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C FG P W E+L+S +P L + + + L I ++ E D Y C
Sbjct: 453 CRTFGSPLPKIHW----EILDS--IPALSNAKISQMTNGSLKISNVS-EEDSNRYTCSVS 505
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN---PEAAPKPKFVWKKD 126
K+ SA+L VL + P + G + + C P WKKD
Sbjct: 506 ETNKS--ISAELEVLN-RTKIVGPP--QNLHVIRGSDAILHCKYTVDHNLKSPTVQWKKD 560
Query: 127 GN-IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
G+ I S K E G+L + V +D GIYSC + D + G + V P
Sbjct: 561 GHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITVQDKPD--- 617
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAY---IWTHNGVRIGNMDLNELETPN------ 235
PP+ L+ S E + +++ + ++ V +++NE ETP+
Sbjct: 618 --PPQ---------SLKLSEKMERSVTISWMPSVENNSPVTEYVIEMNEGETPDEGQWQK 666
Query: 236 ---INIDGGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVEGPPGLPGGVQV 287
++ D LEI ++ ++ +++G + S ++ P P V
Sbjct: 667 YRSVSQDIRQLEIHLQPYSKY-HFQIRAVNSIGTSAPSEFSLSYSIPAAKPDRNPENVMT 725
Query: 288 VEVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 345
+ S I W D P YK+ R + D E+
Sbjct: 726 LSTDPKSMIISWQEMDRRQFNGPGFQYKVFWR----------------RAADSGAHWTES 769
Query: 346 SIEN--VLV----PWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKPYQAPSRIGGG 396
S+ N +LV + ++E KV A N+LG ++P P + D P +APS +
Sbjct: 770 SVSNPPLLVNNTGTFVSFEIKVQAVNDLG----AAPEPLTVIGYSGEDFPLEAPSALSVT 825
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGI------AV 449
+ + + W P+ E + YKI+ R K + ++ GN + A
Sbjct: 826 ELQKTSVMVRWSPVRPESVRGHLLGYKIYLRMKGPSGRLRAGRSPAVGNPTVIEVPADAA 885
Query: 450 VRIPSEF-YYTEYEVKVQAINDVGPGPESE 478
+I S+ YY++Y + + A N G GP SE
Sbjct: 886 EKIVSDLQYYSDYTLTITAFNSKGEGPHSE 915
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 117/304 (38%), Gaps = 61/304 (20%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGE-----LLNSETL-PLEDQDRYFIQDNVLTIRYLNPER 59
D+ CEA G P ++ W ++G+ L S TL P D +F Q
Sbjct: 66 DVNLACEASGDPSPSFRWVKDGKQFGEVLSESGTLTPHPTMDLHFYQ------------- 112
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y+C A N+L T S+ PS K + G + + CN P+++
Sbjct: 113 --GTYRCYAANELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVT 170
Query: 119 PKFVW-KKDGNIIGSGGRRKIFENGNL----LISPVSRDDSGIYSCTATNVHGMDESKGR 173
PK W + I R I +GNL LI+ SRDD Y+C N H ++ S
Sbjct: 171 PKIHWMDMQFHHIPLNERVTISRDGNLYFANLIANDSRDD---YTC---NAHYINAS--- 221
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLR--CSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
I+L + P ++ +R +L A + L+ T + G L
Sbjct: 222 -IILPKEPMSIYVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLECIPEG------L 274
Query: 232 ETPNIN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
TP ++ ID L L+I N +D GEY C +++ + TV V
Sbjct: 275 PTPEVHWDRIDSALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTV 334
Query: 276 EGPP 279
E P
Sbjct: 335 EAAP 338
>gi|29466306|emb|CAD65848.1| NrCAM protein [Mus musculus]
gi|162318336|gb|AAI57008.1| Neuron-glia-CAM-related cell adhesion molecule [synthetic
construct]
gi|162319098|gb|AAI56236.1| Neuron-glia-CAM-related cell adhesion molecule [synthetic
construct]
Length = 1251
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 199/493 (40%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 368 TLICRANGNPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQC 421
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 422 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 477
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 478 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 534
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + P + + C + L +W + + N + + D
Sbjct: 535 TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDK 587
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ S + V P P P +++
Sbjct: 588 DHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 647
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 648 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQ 697
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P + G G + +L I+W+
Sbjct: 698 LKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWK 757
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 758 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 812
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 813 LNDVGFAPEPAAV 825
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NVLTIRYLNPERDPAMY 64
L+ C A G+P W + +L + +R F ++ L I +++ E D Y
Sbjct: 277 LSLECIAEGLPTPIIYWIKEDGMLPA--------NRTFYRNFKKTLQITHVS-EADSGNY 327
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 328 QCIAKNALGAVHHTISVTV-KAAPYWIVAPQNLVLSPGENG--TLICRANGNPKPRISWL 384
Query: 125 KDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 385 TNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVL---- 439
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 440 ---AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDI 490
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 491 YVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 534
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 124/311 (39%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 47 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 103
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 104 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IVLQNGQSLVLPCRPPIGL 162
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 163 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 222
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW-----THNGVRIGNMDLN 229
I L S E TIAA+ + A + + ++ +H GN+
Sbjct: 223 ISLKVISVDEL---NDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSL 279
Query: 230 E-----LETPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
E L TP I DG L L+IT+ S AD+G Y+C+ K+ +G +
Sbjct: 280 ECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQITHVSEADSGNYQCIAKNALGAVH 339
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 340 HTISVTVKAAP 350
>gi|225637533|ref|NP_795904.3| neuronal cell adhesion molecule isoform 1 precursor [Mus musculus]
gi|38372441|sp|Q810U4.2|NRCAM_MOUSE RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
AltName: Full=Neuronal surface protein Bravo;
Short=mBravo; AltName: Full=NgCAM-related cell adhesion
molecule; Short=Ng-CAM-related; Flags: Precursor
Length = 1256
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 199/493 (40%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQC 426
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 427 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 482
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 483 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 539
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + P + + C + L +W + + N + + D
Sbjct: 540 TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDK 592
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ S + V P P P +++
Sbjct: 593 DHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 652
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 653 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQ 702
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P + G G + +L I+W+
Sbjct: 703 LKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWK 762
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 763 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 817
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 818 LNDVGFAPEPAAV 830
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NVLTIRYLNPERDPAMY 64
L+ C A G+P W + +L + +R F ++ L I +++ E D Y
Sbjct: 282 LSLECIAEGLPTPIIYWIKEDGMLPA--------NRTFYRNFKKTLQITHVS-EADSGNY 332
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 333 QCIAKNALGAVHHTISVTV-KAAPYWIVAPQNLVLSPGENG--TLICRANGNPKPRISWL 389
Query: 125 KDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 390 TNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVL---- 444
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 445 ---AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDI 495
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 496 YVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 124/311 (39%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IVLQNGQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 168 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW-----THNGVRIGNMDLN 229
I L S E TIAA+ + A + + ++ +H GN+
Sbjct: 228 ISLKVISVDEL---NDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSL 284
Query: 230 E-----LETPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
E L TP I DG L L+IT+ S AD+G Y+C+ K+ +G +
Sbjct: 285 ECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQITHVSEADSGNYQCIAKNALGAVH 344
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 345 HTISVTVKAAP 355
>gi|301755691|ref|XP_002913689.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion
molecule-like [Ailuropoda melanoleuca]
Length = 1304
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 196/487 (40%), Gaps = 49/487 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P SW NG + E P +D R D ++ ER +YQC A N
Sbjct: 382 CRANGNPKPRISWLSNGVPI--EIAP-DDPSRKIDGDTIIFSSVQ--ERSSVVYQCNASN 436
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIF-CNPEAAPKPKFVWKKDGNI 129
+ ++A + VL P + Y + C +P P W K
Sbjct: 437 EYGYLLANAFVNVLAEPPRILT--AANTLYQVIADRPALLDCAFFGSPLPTIEWFKGAK- 493
Query: 130 IGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G+ R + +NG+L I +D +G Y+C A N GM +++ L + +Q
Sbjct: 494 -GNALREDSYVFHKNGSLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATRIIKQ- 551
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + + C + + L W + + N +D L +
Sbjct: 552 PEYAVVQRGGTVSFECRVNHDHTLIPTITWLKDNGELPN-------DGRFTVDKDHLVVA 604
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSAT 296
+ D G Y CV +T+ +S + V P P P +++ + S
Sbjct: 605 DVRDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYDVPNPPFDLELTDQLDKSVQ 664
Query: 297 IQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ WT G N PIT + I + W + +E + + + L P+
Sbjct: 665 LSWTPGNDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGMQTTAQLKLSPY 714
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V+A N LG PS S QY T A +P P+ + G G + +L I+W+PL +
Sbjct: 715 VNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDTNPTAVEGLGSEPDNLVITWKPLNGFE 774
Query: 415 QNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+NDVG
Sbjct: 775 SNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQALNDVGF 829
Query: 474 GPESEVV 480
PE VV
Sbjct: 830 APEPAVV 836
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 25/272 (9%)
Query: 104 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
G +++ C E P P W K+DG + + K F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYKNFKK-TLQIIQVSEADSGNYQCIAK 343
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N G + V P Y+ P + ++ + +L C A+ ++ W NGV
Sbjct: 344 NSLGAIHHTISVTVKAAP-YWIMAPQNLVLSPGEDGRLICRANGNPKPRIS--WLSNGVP 400
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGPPG 280
I + P+ IDG + ++ + Y+C + G + + V+ E P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSSVQERSSVVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 281 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 340
L + +V + D A G P+ + WF ++ +E D Y
Sbjct: 457 LTAANTLYQVIADRPAL--LDCAFFGSPLPTIE----------WFKGAKGNALRE-DSYV 503
Query: 341 GRKEASIE-NVLVPWSTYEFKVIAGNELGYGE 371
K S+E V ST + +A N+LG +
Sbjct: 504 FHKNGSLEIPVAQKDSTGTYTCVARNKLGMAK 535
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 116/315 (36%), Gaps = 47/315 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL LTI ++
Sbjct: 58 IDPRENIVIQCEAKGKPAPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLTINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T + P P
Sbjct: 115 ETYEGVYQCTARNERGAAISNNIVVRPSRSPLWTKEKLEPITLRNGQSLILPCRPPLGLP 174
Query: 118 KPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSG-IYSCTATNVH---------- 165
P W + + R NG+L S V +D+ Y C A H
Sbjct: 175 PPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQPI 234
Query: 166 -----GMDESKGRLIV-LHGPSYY-----EQLPPKITI----AAHRN------LQLRCSA 204
+DE + L+ +Y + PP A+H+ L L C A
Sbjct: 235 SVKVISVDELNDTIAANLNDTEFYSAKSSRERPPTFLTPEGNASHKEELRGNVLSLECIA 294
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
E L W G + +N N L+I S AD+G Y+C+ K+++
Sbjct: 295 --EGLPTPIIYWIKED---GTLPINRTFYKNFK---KTLQIIQVSEADSGNYQCIAKNSL 346
Query: 265 GKISTKTTVIVEGPP 279
G I +V V+ P
Sbjct: 347 GAIHHTISVTVKAAP 361
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 16/138 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N + K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKAQSSSKRN-------RRHLEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEPLPR 412
+ L++ W+P R
Sbjct: 960 IVNPTLDSLTLEWDPPSR 977
>gi|410898986|ref|XP_003962978.1| PREDICTED: neural cell adhesion molecule L1-like [Takifugu
rubripes]
Length = 1258
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 209/479 (43%), Gaps = 53/479 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G+P + +W NG + +E++ R + VL +R + D A+YQC A N
Sbjct: 343 CQAEGIPTPSITWSINGRNITE----VEEEPRRSVSGGVLILRDVV-FADTAVYQCEATN 397
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY---AGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ + + L V+ L P L S+ EG N+ + C +P+P
Sbjct: 398 KHGSALLNTFLHVVELPPQI----LTSDGLLYRVTEGRNILMDCEVFGSPRPHIT----- 448
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ +IF+ V DD+G+YSC+ H + S + ++ + P
Sbjct: 449 -CCYHTRKTQIFDLC------VDHDDAGVYSCSVK--HNNNVSINAHLEVYNRTVIPAPP 499
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRI-GNMDLNELETPNINIDGGLLEI 245
+ N L C +T+ L A +W +G ++ G+ N+ + G L++
Sbjct: 500 QNLRFLRGTNALLTCGFYTDPRLPPAQVVWRRDGHKLMGSETANKYSV----FEDGTLKV 555
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
+N F D+ +Y C V S + + ++ V P P + + EV + T+ WT G+ +
Sbjct: 556 SNIQFNDSAQYSCEVISLLDHVKAMGSITVVDRPDPPKYLSLAEVTDHNLTLNWTPGSAH 615
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK-EASIENV---LVPWSTYEFKV 361
P+ + + F +H GK+ +K A +++V L P+ TY F+V
Sbjct: 616 NSPMIDFIV---------EFREEQHTEGKKWKWEEMKKVPADVQHVQLSLRPFCTYRFRV 666
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
IA NE+G +PS PS Y T P + P+ + L I+W+ + + N
Sbjct: 667 IAVNEVGRSDPSEPSDTYRTSPAVPDRNPTGVRSESADPDSLVITWDEMDKMYHNGHGFL 726
Query: 422 YKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
Y++ WR +K D + S +K + + YT +E+KV+A+N +G GP E
Sbjct: 727 YEVSWREARKRDARWNSAEVKS------PPFLVQNTGTYTPFEIKVKAVNSLGSGPAPE 779
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 19/230 (8%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPS-----------FKKRPLESETYAGEGGNVTIFCN 112
Y C A+ + + LT+ PS FK S A G VT+ C
Sbjct: 195 YMCNAQYLAARTILTESVISLTVVPSNDVAQARKPHFFKHTGPHSSVLALRGHKVTLECI 254
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
P+ P PK WKK +G + N + +D G Y C A N HG
Sbjct: 255 PKGLPTPKVEWKKKDGRLGETSGQLDKHNRWFHFESIGLNDDGEYECKAWNSHGFTTHSF 314
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ V P Y+ + P + ++L C A E + + W+ NG I ++ E
Sbjct: 315 TVTVEAAP-YWVKKPASQLYSPGETVRLDCQA--EGIPTPSITWSINGRNITEVE----E 367
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
P ++ GG+L + + FAD Y+C + G T + +VE PP +
Sbjct: 368 EPRRSVSGGVLILRDVVFADTAVYQCEATNKHGSALLNTFLHVVELPPQI 417
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 41/293 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNS----ETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D+ C+A G P T+ W ++G L+ S TL E+++ ++
Sbjct: 52 DIHLPCKAKGNPPPTFHWMKDGVLIRSGLHLGTLKAEEEEPL--------------QQFE 97
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSF-KKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y+C A N T + + ++ +P K++ + E+Y GE ++ + CN PE++ P
Sbjct: 98 GHYRCYASNDYGTAMTQSVQVIVEAQPVLPKQQQVHKESYEGE--SIILSCNPPESSTPP 155
Query: 120 KFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATNVHG---MDESKGRL 174
W + I R + +G L S + R+DS Y C A + + ES L
Sbjct: 156 VIHWMDKLMVHISQSERVLVGLDGKLYFSNLLRNDSRTDYMCNAQYLAARTILTESVISL 215
Query: 175 IVL--------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
V+ P +++ P ++ A R ++ + L W R+G
Sbjct: 216 TVVPSNDVAQARKPHFFKHTGPHSSVLALRGHKVTLECIPKGLPTPKVEWKKKDGRLGET 275
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + D GEYEC ++ G + TV VE P
Sbjct: 276 ------SGQLDKHNRWFHFESIGLNDDGEYECKAWNSHGFTTHSFTVTVEAAP 322
>gi|195439078|ref|XP_002067458.1| GK16432 [Drosophila willistoni]
gi|194163543|gb|EDW78444.1| GK16432 [Drosophila willistoni]
Length = 2188
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 200/491 (40%), Gaps = 50/491 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C+ G P W+RN E + S+ RY + DN L I+ L+ + D AM+QC A
Sbjct: 334 CDVVGEPAPQVQWYRNAESVESQI----KNGRYSLSADNTLIIKKLSLD-DAAMFQCLAI 388
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
N+ +S LRV T P ++ P A +G + TI C AP P W +
Sbjct: 389 NEAGENSASTWLRVKTSAPVLEQPP--QNVTALDGKDATILCRAIGAPNPNITWIYNETQ 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
++ R +I E+G+LLIS + D+G+Y C N G + + L VL Q P
Sbjct: 447 LVEISSRVQILESGDLLISNIRASDAGLYICVRANEAGSVKGEAFLSVLVRTQII-QPPV 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
T+ L+C ++ + W G + ++ + + DG L EI
Sbjct: 506 DTTVLLGLTATLQCKVSSDPSVPYNIDWYREG---QSAPISNSQRIGVQADGQL-EIQAV 561
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV---VEVHKTSATIQWTDGATN 305
+D G Y CVV S G + + V P P V+V E + S + WT G
Sbjct: 562 RASDVGSYACVVTSPGGNETRSARLSVIELPFPPSNVKVERLPEPQQRSINVSWTPGFDG 621
Query: 306 GRPITHYKIIAR----------------TNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
PI+ + I R NW + NVS ++ +EN
Sbjct: 622 NSPISKFIIQRREVSELEKFVGPVPDPLLNWITELSNVS-----------ADQRSIVLEN 670
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L + Y+F+V A N +G G PS PS P + P P G + ++ W+P
Sbjct: 671 -LKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQP 729
Query: 410 LPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
E +N + Y + +R N+ + + + + + + +Y V++ A
Sbjct: 730 PLEEHRNGQILGYILRYRLFGYNNVPWSYQNITNEAQRNFLIQEL---ITWKDYIVQIAA 786
Query: 468 INDVGPGPESE 478
N++G G +E
Sbjct: 787 YNNMGVGVYTE 797
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 134
SA ++ L+P P +ETY GG V + C+ P P+ W ++ + S G
Sbjct: 301 SASAKIQILEPPAFFTPTRAETYGDFGGQVQLPCDVVGEPAPQVQWYRNAESVESQIKNG 360
Query: 135 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 194
R + + L+I +S DD+ ++ C A N G + + L V EQ P +T
Sbjct: 361 RYSLSADNTLIIKKLSLDDAAMFQCLAINEAGENSASTWLRVKTSAPVLEQPPQNVTALD 420
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 254
++ + C A ++ +I+ L E+ + ++ G L I+N +DAG
Sbjct: 421 GKDATILCRAIGAPNPNITWIYNET-------QLVEISSRVQILESGDLLISNIRASDAG 473
Query: 255 EYECVVKSTVGKI 267
Y CV + G +
Sbjct: 474 LYICVRANEAGSV 486
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 19/226 (8%)
Query: 256 YECVVKSTVGKISTKTTVIVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 311
+E + VG + KT I G P P + + + S +Q+T G IT
Sbjct: 991 FEIFAWTRVGSGAPKTATIQSGVEPVLPHPPTNLALSNIEAFSVVLQFTPGFDGNSSITK 1050
Query: 312 YKIIARTNWNSTWFNVSE-HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
+K+ A+T N TWF + E E TG LVP++ Y ++ A N +G
Sbjct: 1051 WKVEAQTARNMTWFTICEISDPDAETLTVTG---------LVPFTQYRLRLSATNVVGSS 1101
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK----QNAPNIYYKIFW 426
S + + T +P AP + L + W PL + + NI Y+
Sbjct: 1102 RASDATKDFQTIQARPMHAPFNVTVRAMSAQQLRVRWIPLQQTEWFGNPRGYNITYRQLE 1161
Query: 427 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
R + T+ + + V + S +T YEV + A NDVG
Sbjct: 1162 RTSGPVKSVPRTVVIEDHTANSHV-LESLEEWTVYEVIMNACNDVG 1206
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 103/286 (36%), Gaps = 32/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P TY W ++G +P+ D T R D YQC AKN
Sbjct: 46 CHALGYPQPTYRWLKDG-------IPVGDYSTSQFYRIPSTRR-----EDAGSYQCIAKN 93
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVWKKDGN 128
+ +S V+ F+ + + G+ IF P E+ P P VW+ +
Sbjct: 94 DAGSIFSEKSTVVVAYMGIFEN--ITEGRLSVISGHPAIFDMPIIESVPAPSVVWQSEDG 151
Query: 129 IIGSGGRRKIFENGN-LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH--GPSYYEQ 185
+ + N L+I +D Y A N E + L+ G Y E
Sbjct: 152 PLSYDIKYAFTSPSNQLIILSADENDRKGYRARAINTQLGKEEISAFVHLNISGDPYVEV 211
Query: 186 LPPKITIAAHRN-------LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P I ++L+C A+ L ++ +W +G+ + + N
Sbjct: 212 APEIIVRPQDMKVKLGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDPWNR 271
Query: 239 DGGLLEITNASFADAGEYECVVKSTVG---KISTKTTVIVEGPPGL 281
LL+ A+ + +GEY C V+ G +S + + PP
Sbjct: 272 TLALLQ---ANSSHSGEYTCQVRLRSGGYDTVSASAKIQILEPPAF 314
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 24/215 (11%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
PP +P V ++ T WT G P+ Y + R N W ++ EHV +
Sbjct: 1439 PPSMPQ-VSRSQIQAHQITFSWTPGRDGFAPLRFYTVQMREN-EGPWQSLPEHV-DPALS 1495
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
YT L P + Y+F++ A N+LG PS+ S + P A +G GG
Sbjct: 1496 SYTAVG-------LKPHTIYQFRIQATNDLG---PSAFSQESIVVRTLP--AAPAVGVGG 1543
Query: 398 GKIGDLSIS-----WEPLPREKQN--APNIYYKIFWRKKND--TEFQSETLKEYGNVGIA 448
K+ ++I+ W L N A Y+I +++ +D T QS + + +
Sbjct: 1544 LKVVPITITSVRVHWNALETGMWNGDAATGGYRILYQQLSDFPTALQSTPKTDVMGINVN 1603
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
V + YE+ V N GPGP + ++
Sbjct: 1604 SVVLSDLQQDRNYEIVVLPFNSQGPGPATPPAAVY 1638
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 116/531 (21%), Positives = 201/531 (37%), Gaps = 94/531 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMY 64
D T C A G P+ +W N ET +E R ++ L I + D +Y
Sbjct: 423 DATILCRAIGAPNPNITWIYN------ETQLVEISSRVQILESGDLLISNIR-ASDAGLY 475
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV-- 122
C N+ + A L VL ++ + P+++ G T+ C + P +
Sbjct: 476 ICVRANEAGSVKGEAFLSVL-VRTQIIQPPVDTTVLLGL--TATLQCKVSSDPSVPYNID 532
Query: 123 WKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W ++G I + R + +G L I V D G Y+C T+ G + RL V+ P
Sbjct: 533 WYREGQSAPISNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRSARLSVIELP 592
Query: 181 SYYEQLPPKITIAAHRNLQL-RCSAHTEELLDVAYIWTHNG------VRIGNMDLNELET 233
PP N+++ R + ++V++ +G I +++ELE
Sbjct: 593 -----FPPS-------NVKVERLPEPQQRSINVSWTPGFDGNSPISKFIIQRREVSELEK 640
Query: 234 ----------------PNINIDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVE 276
N++ D + + N A ++ + VG+ S ++ + +VE
Sbjct: 641 FVGPVPDPLLNWITELSNVSADQRSIVLENLKAATVYQFRVSAVNRVGEGSPSEPSNVVE 700
Query: 277 GPPGLPGG--VQVVEVHKTSATI--QWT---DGATNGRP---ITHYKIIARTNWNSTWFN 326
P P G V V ++ + I QW + NG+ I Y++ N ++ N
Sbjct: 701 LPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLFGYNNVPWSYQN 760
Query: 327 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 386
++ E R +E L+ W Y ++ A N +G G + S + T P
Sbjct: 761 IT-----NEAQRNFLIQE------LITWKDYIVQIAAYNNMGVGVYTEGS-KIKTKEGVP 808
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKK------NDTEFQSET- 438
P+++ I+W P ++ N N YKI W+K+ D E + T
Sbjct: 809 EAPPTQVKVKALNSTAAKINWTPPNPQQINGINQGYKIQAWQKRLIESEWRDVERRMITV 868
Query: 439 -------LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
L E G + + + + EY + V D G G S+ V +
Sbjct: 869 PPSLIDPLAEQGAILSGLDK------FAEYNISVLCFTDPGDGVASQQVYV 913
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147
P F P S + EG + C+ P+P + W KDG +G + + I
Sbjct: 23 PRFTTHPSSSGSIVSEGSTKILQCHALGYPQPTYRWLKDGIPVGDYSTSQFYR-----IP 77
Query: 148 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
R+D+G Y C A N G S+ +V+ +E +
Sbjct: 78 STRREDAGSYQCIAKNDAGSIFSEKSTVVVAYMGIFENI 116
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 25/209 (11%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
E PG P V +V + A I W + I Y++ N +S E
Sbjct: 1336 EDTPGAPSNVSFPDVTFSMARIIWDEPEDPNGEILAYQVTYTLNGSSNLNYSREFSPSDR 1395
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
+ R T L+P Y F V A LG+G+ ++ ++P Q PS
Sbjct: 1396 LFRATQ---------LLPERYYSFSVTAQTRLGWGKTATVLVYTTNNRERP-QPPSMPQV 1445
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS------ETLKEYGNVGIAV 449
+I I++ P AP +Y + R+ N+ +QS L Y VG+
Sbjct: 1446 SRSQIQAHQITFSWTPGRDGFAPLRFYTVQMRE-NEGPWQSLPEHVDPALSSYTAVGLKP 1504
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPGPESE 478
+T Y+ ++QA ND+GP S+
Sbjct: 1505 --------HTIYQFRIQATNDLGPSAFSQ 1525
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 92/241 (38%), Gaps = 46/241 (19%)
Query: 269 TKTTVIVEGPPGLP----GGVQVVEVHKTSATIQWT---------DGATNGRPITHYKII 315
++ +++V P P GG++VV + TS + W D AT G I + ++
Sbjct: 1524 SQESIVVRTLPAAPAVGVGGLKVVPITITSVRVHWNALETGMWNGDAATGGYRILYQQLS 1583
Query: 316 AR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 374
T ST V+G V+ N YE V+ N G G +
Sbjct: 1584 DFPTALQST---PKTDVMGINVNSVVLSDLQQDRN-------YEIVVLPFNSQGPGPATP 1633
Query: 375 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW-------- 426
P+ Y A P P + ++ + WEP + QN + YKIF+
Sbjct: 1634 PAAVYVGEA-VPTGEPREVDAAPISSTEVRLRWEPPKQSMQNGDILGYKIFYLVTYSPQA 1692
Query: 427 ----RK-KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
RK + + E S T + V + +TEY +++ A N G GP S +T
Sbjct: 1693 LEPGRKWEEEIEVVSATATSHSLVFLD--------KFTEYRIQLLAFNPAGDGPRSSPIT 1744
Query: 482 I 482
+
Sbjct: 1745 V 1745
>gi|307206268|gb|EFN84333.1| Protein sidekick [Harpegnathos saltator]
Length = 2141
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 203/485 (41%), Gaps = 33/485 (6%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERD 60
D + +T +C+ G P +WFRN E + + + RY I QD LTI+ L + D
Sbjct: 307 DYGSTVTLSCDVDGTPVPKITWFRNAESVGNL-----KESRYVIEQDGSLTIKKLTMD-D 360
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
M+QC A N+ S LR T KP + P +G + T+ CN AAPKP
Sbjct: 361 SGMFQCLASNEAGEASSYTWLRAKTSKPIMENGP--QNLTVLDGKDATLSCNAVAAPKPN 418
Query: 121 FVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
W D ++ GR ++ +NG+LLI+ V +D+G Y+C N G G L V+
Sbjct: 419 TTWYYNDTILVEIAGRVQVLDNGDLLIAAVKPNDAGKYTCIRANEAGSVNGSGLLTVMVR 478
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
+ Q P ++ + +L+CS + + W HN I ++ +
Sbjct: 479 -TRIVQPPVDTSVLLGQTAKLQCSVVNDPSVVYDMAWFHNAQVINTQASQRVKMRH---- 533
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA---T 296
G LEI +D GEY C V S G + + V P P V V + S
Sbjct: 534 DGTLEIVAVRASDVGEYMCSVVSPGGNETRSARLSVIELPFAPINVVATRVERISPRTIN 593
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV--DRYTGRKEASIENVLVPW 354
+ W G P + + R +S +S+ ++ ++ + + + + L
Sbjct: 594 VTWVPGFDGNSPTKKFTVEKREVSDSA--PISDSLVNWDIVCNNVSADTRWVLLSNLKAA 651
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ Y+F+V A N +G G S PS P + P P G ++ W+ LP E+
Sbjct: 652 AAYQFRVYAENSVGKGMSSEPSNIVVLPQEPPSGPPVGFVGSARSSSEIITQWQ-LPLEE 710
Query: 415 QNAPNIY-----YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+I Y++F N Q+ T + N I + + +YEV++ A N
Sbjct: 711 YRNGHILGYILRYRLFGYSVNPWMTQNITNEAQRNYLITDL-----ITWKDYEVQIAAYN 765
Query: 470 DVGPG 474
D G G
Sbjct: 766 DKGVG 770
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 74 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS- 132
T +SA++ V KP+F L+ ET + G VT+ C+ + P PK W ++ +G+
Sbjct: 281 TLSASAEVTVYE-KPTFNTE-LKKETLSDYGSTVTLSCDVDGTPVPKITWFRNAESVGNL 338
Query: 133 -GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT 191
R I ++G+L I ++ DDSG++ C A+N G S L E P +T
Sbjct: 339 KESRYVIEQDGSLTIKKLTMDDSGMFQCLASNEAGEASSYTWLRAKTSKPIMENGPQNLT 398
Query: 192 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 251
+ ++ L C+A + W +N + L E+ +D G L I
Sbjct: 399 VLDGKDATLSCNAVAAPKPNTT--WYYN-----DTILVEIAGRVQVLDNGDLLIAAVKPN 451
Query: 252 DAGEYECVVKSTVGKIS 268
DAG+Y C+ + G ++
Sbjct: 452 DAGKYTCIRANEAGSVN 468
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG----PPGLPGG 284
+ L+ N D ++ + ++E ++VG K VI G P P
Sbjct: 938 DSLQVKNFTADVLSTKVEHLQAMTHYKFEVAAWTSVGPGKAKVAVIQSGIEPVLPEPPTK 997
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 344
+ + + S +Q+T G IT + + A+T NSTW+N+ E +
Sbjct: 998 LALSNIDAFSVVLQFTPGFDGNSSITKWTVQAQTARNSTWYNIYE----------VSDPD 1047
Query: 345 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
A V L P++ Y+ ++IA N +G +PS P+ ++ T P P + +
Sbjct: 1048 ACTVTVDGLTPFTQYKLRLIANNVVGASQPSEPTKEFQTIQAPPSHPPKNVTVRAMSATE 1107
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
L + W PL + + Y + +++ +S T++++ V+ EF +YE
Sbjct: 1108 LRVRWIPLQQVEWYGNPRGYNVTYKEVRTNLSKSITIEDH-TANSYVLENMEEF--ADYE 1164
Query: 463 VKVQAINDVG 472
+ +QA NDVG
Sbjct: 1165 IVMQAFNDVG 1174
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 129/374 (34%), Gaps = 45/374 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P Y+WF++ + ++ + + IQ +D +Y C A N
Sbjct: 29 CQARGNPQPKYTWFKDWQAVSRPNIA---PGSFRIQSTR--------RKDTGVYHCVATN 77
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVW-KKDG 127
+ + +S + F L E GN + P E+ P P W DG
Sbjct: 78 DVGSIFSDRIAFSVAYMGKFDD--LTDRVVTVEYGNAAVLELPPIESNPSPGVSWFSSDG 135
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH--------- 178
+ GR+ + L I + D G Y A N E L
Sbjct: 136 TEL--YGRKYATTDHKLFILDAMKSDEGSYRARAFNTQLGKEENSPFFKLQVTGDPNAEV 193
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
PS + + I + C A+ L ++ +W +G+ I N + + N
Sbjct: 194 APSIIVKPQDTLIIKDQNAAHMYCIANARALHELRILWMKDGIPIENSRVAYSFNDSWN- 252
Query: 239 DGGLLEITNASFADAGEYECVVKSTVG---KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
L + +A+ G Y C V G +S V V P ++ + +
Sbjct: 253 --RTLMLISANMTYTGTYSCHVDLKSGGYPTLSASAEVTVYEKPTFNTELKKETLSDYGS 310
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPW 354
T+ + +G P+ TWF +E V + RY ++ S+ L
Sbjct: 311 TVTLS-CDVDGTPVPKI----------TWFRNAESVGNLKESRYVIEQDGSLTIKKLTMD 359
Query: 355 STYEFKVIAGNELG 368
+ F+ +A NE G
Sbjct: 360 DSGMFQCLASNEAG 373
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 86 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
L+P F +P S E + C P+PK+ W KD + R G+
Sbjct: 4 LEPRFIIQPSNSGNILSENRTKILQCQARGNPQPKYTWFKDWQAVS----RPNIAPGSFR 59
Query: 146 ISPVSRDDSGIYSCTATNVHG 166
I R D+G+Y C ATN G
Sbjct: 60 IQSTRRKDTGVYHCVATNDVG 80
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 75/199 (37%), Gaps = 13/199 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
E PG P V +V T+A I W I YK++ N N E
Sbjct: 1289 EDAPGPPSNVSFPDVSFTTARIIWDTPEDPNGEIFAYKVVFHLNSNQDRQFSKEFPASDR 1348
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
TG L P Y F V A LG+G+ + ++P QAPS
Sbjct: 1349 TFTATG---------LEPEKYYMFSVTAQTRLGWGKTAYALVFTTNNRERP-QAPSMPQV 1398
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 455
++ I++ P AP YY + + +N FQ T+ E + +
Sbjct: 1399 SKSQVQSRQITFSWTPGRDGFAPLRYYTV-QQSENSGPFQ--TIPERVEPTLTSYTANNL 1455
Query: 456 FYYTEYEVKVQAINDVGPG 474
YT Y+ ++QA ND+GP
Sbjct: 1456 KPYTLYQFRIQATNDIGPS 1474
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 4/129 (3%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE V+ N G G S P Y A P P + ++ + W+P QN
Sbjct: 1569 YEIIVLPFNSEGEGPLSPPVTVYVGEA-VPTGEPQHLKADPISSTEVHLRWKPPQANMQN 1627
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---YTEYEVKVQAINDVGP 473
+ YKIF+ + + + +E V A S + YTEY ++V A N G
Sbjct: 1628 GDLLGYKIFYLVTDSPQQLEKKQEEEIEVVPASCLAHSLVFLDKYTEYRIQVLAFNPAGD 1687
Query: 474 GPESEVVTI 482
GP S +T+
Sbjct: 1688 GPRSRPITV 1696
>gi|345307999|ref|XP_001505279.2| PREDICTED: contactin-3-like [Ornithorhynchus anatinus]
Length = 475
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 110/218 (50%), Gaps = 9/218 (4%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ +L W C+A G P +Y W +NGE L E R I++ LTI LN D M
Sbjct: 190 EENLYWECKASGKPKPSYRWLKNGETLVVE-------GRIQIENGALTITSLNL-TDSGM 241
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ YSSA+L+VL P F K P++ G V C P+A+PK + W
Sbjct: 242 YQCIAENKHGLMYSSAELKVLAFAPDFSKNPMKKLIQVQVGSLVNFECKPKASPKAVYSW 301
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K+ ++ R I + G L I+ V++ D G Y+C A N G+ S +LIV P+
Sbjct: 302 KRGDELLHENARITILKEGELRIANVTKLDIGTYTCVAENQFGVASSTTKLIVAE-PTRI 360
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
P + ++ ++ L C + LLD+ + W NGV
Sbjct: 361 ILGPSNMDVSVGESVILPCQVQYDPLLDIMFTWYLNGV 398
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 108/268 (40%), Gaps = 17/268 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A G P SW R S+ LP + + + +L I E D Y+C +N
Sbjct: 107 CFALGNPVPQISWRR------SDGLPFSSKIKTMKANGILEIPNFQQE-DSGSYECITEN 159
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ +L KP + + E E N+ C PKP + W K+G +
Sbjct: 160 SRGKNIAKGRLTYYA-KPHWLQIIQNVEATMEE--NLYWECKASGKPKPSYRWLKNGETL 216
Query: 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI 190
GR +I ENG L I+ ++ DSG+Y C A N HG+ S L VL + + P K
Sbjct: 217 VVEGRIQI-ENGALTITSLNLTDSGMYQCIAENKHGLMYSSAELKVLAFAPDFSKNPMKK 275
Query: 191 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
I + + Y W G+ L+E I + G L I N +
Sbjct: 276 LIQVQVGSLVNFECKPKASPKAVYSWKR-----GDELLHENARITI-LKEGELRIANVTK 329
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGP 278
D G Y CV ++ G S+ T +IV P
Sbjct: 330 LDIGTYTCVAENQFGVASSTTKLIVAEP 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+ V + C P P+ W++ + S + + NG L I ++DSG Y C
Sbjct: 97 VAKDSTVQLECFALGNPVPQISWRRSDGLPFSSKIKTMKANGILEIPNFQQEDSGSYECI 156
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
N G + +KGRL P ++ Q+ + NL C A + +Y W NG
Sbjct: 157 TENSRGKNIAKGRLTYYAKP-HWLQIIQNVEATMEENLYWECKASGKP--KPSYRWLKNG 213
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ + I I+ G L IT+ + D+G Y+C+ ++ G
Sbjct: 214 ETL-------VVEGRIQIENGALTITSLNLTDSGMYQCIAENKHG 251
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 29/194 (14%)
Query: 136 RKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSY 182
R++F E G+L I+ V D G Y+C T+ + G L + P
Sbjct: 28 RRLFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNSQVFGSPTPLVLRTDGVMGEYEPKI 87
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN---GVRIGNMDLNELETPNINID 239
Q P + +A +QL C A + +++ + +I M N
Sbjct: 88 EVQFPETLPVAKDSTVQLECFALGNPVPQISWRRSDGLPFSSKIKTMKAN---------- 137
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G+LEI N D+G YEC+ +++ GK K + P +Q VE + W
Sbjct: 138 -GILEIPNFQQEDSGSYECITENSRGKNIAKGRLTYYAKPHWLQIIQNVEA-TMEENLYW 195
Query: 300 TDGATNGRPITHYK 313
A+ G+P Y+
Sbjct: 196 ECKAS-GKPKPSYR 208
>gi|395539191|ref|XP_003771556.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule
[Sarcophilus harrisii]
Length = 1306
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 211/517 (40%), Gaps = 59/517 (11%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C A G P SW NG + E P +D R D +L E A+YQ
Sbjct: 379 DGTLICRANGNPKPKISWLTNGVPI--EMAP-DDPSRKIDGDTILFSDVQ--ESSSAVYQ 433
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPS-FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N+ ++A + VL P L + + C +P P F W
Sbjct: 434 CNASNEYGYLLANAFVNVLAEPPRILTDANLHYQVITDRPA--MLDCAFFGSPIPTFKWF 491
Query: 125 K--DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K G+++ IF +NG L I +D +G Y+C N GM ++ L + P+
Sbjct: 492 KGTKGSVLQENTY--IFHDNGTLEIPVAQKDSAGTYTCVVRNKLGMAKNDVHLEI-KDPT 548
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ P + + C + L W + + N +ID
Sbjct: 549 RIIKHPEYKVVQRGGKVSFECKVKHDPTLIATLTWLKDNGELPN-------DGRFSIDND 601
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L I N S D Y CV +++ +S + V P P P +++ +
Sbjct: 602 HLVIMNISDEDDATYTCVANTSLDIVSASAVLRVVAPSPTPAPVYDRPNPPFDLELTSLL 661
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
+ S + W G N PIT + I + + W + S+ V G + + E
Sbjct: 662 ERSVQLSWIPGDENNSPITDFIIEYEDSLHEPGIWHHHSD-VPGTQ---------TTAEL 711
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+VIA N +G PS S Y T A +P + P+ + G G + +L I+W+P
Sbjct: 712 KLSPYVKYSFRVIAVNSIGRSLPSEVSEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQP 771
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L N P + YK+ WR+K+ D E+ S + NV +V F Y VKVQA+
Sbjct: 772 LKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQAL 826
Query: 469 NDVGPGPESEVVTIWHDPLVIISYVCQGDLKLCLPRD 505
NDVG PE P++II + + DL + P +
Sbjct: 827 NDVGFAPE---------PVIIIGHSGE-DLPMVAPSN 853
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L+ C A G+P + +W + +GEL P+ ++ Y L I ++ E D Y+
Sbjct: 290 LSLECIAEGLPTPSITWTKEDGEL------PI-NRTSYTNFRKTLNINLVS-EADSGKYK 341
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + V P + P GE G T+ C PKPK W
Sbjct: 342 CTARNPLGFVEHTISVTV-KAAPYWITAPKNLVLSPGEDG--TLICRANGNPKPKISWLT 398
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G + RKI + +L S V S +Y C A+N +G + + VL
Sbjct: 399 NGVPIEMAPDDPSRKI-DGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVL----- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I A NL + +LD A+ + G + + N
Sbjct: 453 --AEPPRILTDA--NLHYQVITDRPAMLDCAFFGSPIPTFKWFKGTKGSVLQENTY---- 504
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
I D G LEI A AG Y CVV++ +G + ++ P
Sbjct: 505 IFHDNGTLEIPVAQKDSAGTYTCVVRNKLGMAKNDVHLEIKDP 547
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 120/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P ++SW RNG + + PL + L I
Sbjct: 60 IDPRENIEIQCEAKGKPPPSFSWTRNGTHFDIDKDPLV---KMLPNSGTLVISITIEGKA 116
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T +G ++ + C P
Sbjct: 117 ETYEGVYQCTARNERGAAISNNIIIRPSRSPLWTKEKLEQITIL-KGQSLVLPCRPPLGL 175
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTA------------- 161
P ++ D + ++ + NG+L S V +D+ Y C A
Sbjct: 176 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYVCYARFNHTQTIQQKQP 235
Query: 162 --TNVHGMDESKGRLIV------LHGPSYYEQLPPKITIAAHRN----------LQLRCS 203
VH MDE + +G Y + PPK+ R L L C
Sbjct: 236 ISVKVHSMDELNDTITANLSDSEFYGAKSYIERPPKLLSPEGRTSHKEELRENVLSLECI 295
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L + WT G + +N N L I S AD+G+Y+C ++
Sbjct: 296 A--EGLPTPSITWTKED---GELPINRTSYTNFR---KTLNINLVSEADSGKYKCTARNP 347
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 348 LGFVEHTISVTVKAAP 363
>gi|322789026|gb|EFZ14484.1| hypothetical protein SINV_07406 [Solenopsis invicta]
Length = 779
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 19/343 (5%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147
P+ + P + T +G + I C PKP+ W KDG + +G R KI + G+L I
Sbjct: 24 PNITQSPSDLSTV--DGKIIQITCRVFGTPKPEVKWVKDG-LELTGSRYKILDVGDLEIE 80
Query: 148 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN--LQLRCSAH 205
V+ D+GIY+C A+N+ G + L V ++ P +A N + RC A
Sbjct: 81 NVTFQDAGIYTCYASNIFGEVNASACLTVKEHTKITDE-PEDYEVARGSNSIAKFRCKAI 139
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ L + W NG I D + + I I+ L I + D+G Y C+ ++ +
Sbjct: 140 ADPTLPLTIDWLSNGEPI---DFKK-QPRFIQINKYTLIIIGITELDSGVYTCIARTDLD 195
Query: 266 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325
++ + T++V+ P P V + + SA ++W N PI HY I T + +
Sbjct: 196 EVRAQATLMVQTVPNAPRLVST-KCNPNSAIVEWIPMGDNRAPILHYIIQYNTTFTPDIW 254
Query: 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
S + + RY E + PW+ Y F V+A N++G PS T AD
Sbjct: 255 ETSTNYVPATDLRY--------EVPMSPWANYTFHVLALNKIGLSLPSPHGDVCTTEADV 306
Query: 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 428
PY+ P + G G +L ISW + + N P YKIF+++
Sbjct: 307 PYKNPDNVMGKGTTPQNLVISWTTMQEIEHNGPKFLYKIFYKR 349
>gi|47209404|emb|CAF90870.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1319
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 127/539 (23%), Positives = 220/539 (40%), Gaps = 102/539 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G+P T +W NG+ + ++++ R + VL +R + D A+YQC A N
Sbjct: 323 CQAEGIPTPTITWSINGQPITE----VDEEPRRSVSGGVLILRDVV-FSDTAVYQCEATN 377
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY---AGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ + + L V+ L P L S+ EG NV + C +P+P W+ +
Sbjct: 378 KHGSALLNTFLHVVELPPQI----LTSDGLLYKVTEGKNVLMDCEAFGSPRPHITWEAED 433
Query: 128 NI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN-----VHGMDESKGRLIVLHGPS 181
+ + S R + NG L++S V DD+G+YSC+ + ++ E R ++L P
Sbjct: 434 RLPLLSNPRVSLMTNGTLVMSEVDHDDAGVYSCSVKHNNNISINAHLEVYNRTVILKPPE 493
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNIN--- 237
+ I ++ L C T+ L A +W +G+++ +E+ N
Sbjct: 494 -------DLLILRGTSVLLPCKFSTDPRLPKAQVVWKKDGIKL-------MESKAANKYS 539
Query: 238 -IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+D L +++ F+D+ Y C V S + ++ ++ V P P + + EV S T
Sbjct: 540 FLDTDTLIVSDVQFSDSAPYSCEVISALDHVTATGSITVVDRPDPPKHLFLSEVTDDSLT 599
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ WT G ++ PIT + + +R ++ E +E + + ++ L P+ T
Sbjct: 600 LNWTPGPSHNSPITEFIVESREEQHTE----QEKWKWEETQKVPPNSQ-HLKLSLRPYCT 654
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADK--------------------------PYQAP 390
Y F+VI NE+G +PS PS + TP P Q P
Sbjct: 655 YRFRVITVNEVGRSDPSEPSDSHRTPPAGTCSYLQPFIGITKEPGINLPLHFPPVPDQNP 714
Query: 391 SRIGGGGGKIGDLSISW--------------------------EPLPREKQNAPNIYYKI 424
S + L I+W + + + N + YK+
Sbjct: 715 SGVRSESTDPDTLLITWDVSGLVQVSAFTSDQILFFKKKNMFLQEMDQLSHNGHDFLYKV 774
Query: 425 FWRK--KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
WR+ D + S +K + YT +E+ VQA+N +G GP E T
Sbjct: 775 SWREAGAQDARWNSAEVKS------PPFLVEKTGTYTPFEITVQAVNSLGSGPAPEPKT 827
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
Query: 115 AAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
+ P P+ WKK DG++ + GR + N + D G Y C A N HG
Sbjct: 237 SEPTPEVEWKKKDGSLEETSGRGDKY-NRWFHFESIGLKDDGEYECKARNSHGFTTHSFT 295
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ V P Y+ + P + ++L C A E + W+ NG I +D E
Sbjct: 296 VTVEAAP-YWVKEPTSQLYSPGETVRLDCQA--EGIPTPTITWSINGQPITEVD----EE 348
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
P ++ GG+L + + F+D Y+C + G T + +VE PP +
Sbjct: 349 PRRSVSGGVLILRDVVFSDTAVYQCEATNKHGSALLNTFLHVVELPPQI 397
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 83/214 (38%), Gaps = 29/214 (13%)
Query: 59 RDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK 118
+D Y+C+A+N S + V P + K P S+ Y+ G V + C E P
Sbjct: 274 KDDGEYECKARNSHGFTTHSFTVTV-EAAPYWVKEPT-SQLYS-PGETVRLDCQAEGIPT 330
Query: 119 PKFVWKKDGNIIGSGGR--RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W +G I R+ G L++ V D+ +Y C ATN HG L V
Sbjct: 331 PTITWSINGQPITEVDEEPRRSVSGGVLILRDVVFSDTAVYQCEATNKHGSALLNTFLHV 390
Query: 177 LHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
+ +LPP+I + +N+ + C A + + L
Sbjct: 391 V-------ELPPQILTSDGLLYKVTEGKNVLMDCEAFGSPRPHITW--------EAEDRL 435
Query: 229 NELETPNINI-DGGLLEITNASFADAGEYECVVK 261
L P +++ G L ++ DAG Y C VK
Sbjct: 436 PLLSNPRVSLMTNGTLVMSEVDHDDAGVYSCSVK 469
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D++ CEA G P T+ W ++G+ + S+ Q + +D++L ++ Y+
Sbjct: 69 DISLPCEATGNPPPTFEWVKDGQRIRSDLASGTLQAK---EDDLL-------QQFEGHYR 118
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N T + ++ +P K+ + A EG ++ + CNP + P F+
Sbjct: 119 CYASNIYGTAMTQIVHVIVEAQPVLLKQ-QKDHKRAYEGESLILSCNPPESSTPPFIHWM 177
Query: 126 DGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGM---DESKGRLIVL 177
D + I R + +GNL S + + DS Y C A + M ES L VL
Sbjct: 178 DKQMIHISQSDRVMVGLDGNLYFSNLLKSDSRKDYMCNAQYLAVMTTLTESAISLTVL 235
>gi|149051181|gb|EDM03354.1| rCG62174, isoform CRA_c [Rattus norvegicus]
Length = 880
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 182/432 (42%), Gaps = 38/432 (8%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPE 114
E A+YQC A N+ ++A + VL P R L S Y + C
Sbjct: 7 ESSSAVYQCNASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFF 62
Query: 115 AAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+P P W K GS I+ +NG L I +D +G Y+C A N GM +++
Sbjct: 63 GSPMPTIEWFK--GTKGSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNE 120
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
L + P+ + + P + + C + L +W + + N +
Sbjct: 121 VHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE---- 175
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 291
++D L +++ D G Y C +T+ +S + V P P +++
Sbjct: 176 ---RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVDVPNPPFDLELTNQL 232
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 233 DKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQL 282
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+P
Sbjct: 283 KLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWKP 342
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 343 LNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 397
Query: 469 NDVGPGPESEVV 480
NDVG PE V
Sbjct: 398 NDVGFAPEPAAV 409
>gi|380029950|ref|XP_003698626.1| PREDICTED: Down syndrome cell adhesion molecule-like protein
Dscam2-like [Apis florea]
Length = 1848
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 219/512 (42%), Gaps = 50/512 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++A +T T + +P + +SW ++GE L S +L +E++ F ++L + L+ R
Sbjct: 536 SRAQVTCTVTSGDLP-IYFSWLKDGEPLPS-SLRIEERVAEFF--SLLVFKELS-SRHSG 590
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N +A+L ++ + P + P + T G NV C + P P+
Sbjct: 591 KYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQDVATLLGNPLNV--HCEAKGFPPPRVT 647
Query: 123 W----KKDGN-----IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W ++ N I G+ GR I NG+L + D G Y C A N G SK
Sbjct: 648 WLRARERTSNDYQPLIDGTDGRLTILPNGSLWTASAGPQDEGHYLCRANNGIGSGLSKVI 707
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ +H P+ +E +TI ++ L C+ + ++V W HN R+ + + + L
Sbjct: 708 YVSVHEPARFEFQSKNVTIRRGESVTLDCTVIGDNPIEVQ--WMHNSDRL-DTNNHRLSI 764
Query: 234 PNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I D GL L I ++ D+G Y C + G+ + V+ P P ++V+E+
Sbjct: 765 SQIKTDNGLKSQLSIGSSDRQDSGVYRCTADNAYGRSEHLIYLAVQERPDPPASLEVIEI 824
Query: 291 HKTSATIQWTDGATNGRPITHYKIIART-------NWNSTWFNVSEHVIGKE-------- 335
S + W PI +Y I R+ +WN + + G
Sbjct: 825 GSRSIRLLWRRAFDGNSPIRNYVIQYRSLNHGLADDWNPAKTHNVTYTPGHSNNGNTIHP 884
Query: 336 -------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
+ + +E ++ L P TY F++ A N + P+ P T + P +
Sbjct: 885 TQNGLSPFETTSDDQEVALVGGLHPAVTYTFRIFAINSIDVSVPTDPV-VAKTQEEAPTE 943
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---QSETLKEYGNV 445
P I G+L +SW+P P+E N + Y + W + + + QS++L G
Sbjct: 944 PPQNIKVQSAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSSTSGVNQSKSLTVNG-W 1002
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
V++ +T+Y++ ++A N + GP S
Sbjct: 1003 ATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 1034
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 34/294 (11%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ +D+ TC A G P ++W+R+ +N ++P+E R + +++ IR ++ + D
Sbjct: 246 ESGSDVHLTCSAQGNPAPQFAWYRD---VNGHSIPVESFGRIQLWGDLMQIRRVDAQ-DA 301
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y CRA NQ+ + + L V T K + + +P +GE + T+ C E P
Sbjct: 302 GRYICRASNQIGEQRAETHLSV-TSKLNARIQPRVQIINSGE--SATMNCTVEGYPVESV 358
Query: 122 VWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT----NVHGMDESK-GRL 174
W DG + R ++ L+I V R D G+Y C N E K G
Sbjct: 359 EWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRKDKGMYQCLVRSDKENAQATAELKLGDT 418
Query: 175 IVLHGPSYYEQL----PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ ++ EQ PP + LRCSA ++ W +G + +
Sbjct: 419 VPELQYTFIEQALRPGPP---------VSLRCSATGSP--PPSFTWLLDGEPLSEIASGH 467
Query: 231 LETPNINIDG-----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D L I++A D G Y CV +T+ + K + + GPP
Sbjct: 468 RYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNIYGPP 521
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 25/284 (8%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T C G P + W +G L +D + VL I + +D MYQC
Sbjct: 345 TMNCTVEGYPVESVEWLHDG----VPVLTAQDTRIRLLAPLVLVIGSVG-RKDKGMYQCL 399
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
++ + ++A+L++ P + +E G V++ C+ +P P F W DG
Sbjct: 400 VRSDKENAQATAELKLGDTVPELQYTFIEQALRPGP--PVSLRCSATGSPPPSFTWLLDG 457
Query: 128 ---NIIGSGGRRKIFE----NGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+ I SG R I + +G+++ IS +D G+Y+C A N E K RL +
Sbjct: 458 EPLSEIASGHRYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNI 517
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPN 235
+GP + Q+ C+ + + L + + W +G + ++ + E
Sbjct: 518 -YGPPVMSPFNFPSNLQEGSRAQVTCTVTSGD-LPIYFSWLKDGEPLPSSLRIEE----R 571
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ LL S +G+Y CV ++ K++ ++V+ PP
Sbjct: 572 VAEFFSLLVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 615
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 31/257 (12%)
Query: 22 SWFRNGELLNSETLP--LEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQL---KTR 75
SWFR+ +L LP + R+ + L IR P+ A Y C + L + R
Sbjct: 161 SWFRDDAIL----LPGSTDTGGRFVVTSQGDLHIRATRPDDGRATYSCLTFHALTGERRR 216
Query: 76 YSSAQLRVL----TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--- 128
A L V T+ P +R + A G +V + C+ + P P+F W +D N
Sbjct: 217 SEPATLTVTEPTGTMPPRLMQRS-QIAISAESGSDVHLTCSAQGNPAPQFAWYRDVNGHS 275
Query: 129 -IIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ S GR +++ G+L+ I V D+G Y C A+N G ++ L V ++
Sbjct: 276 IPVESFGRIQLW--GDLMQIRRVDAQDAGRYICRASNQIGEQRAETHLSVTS--KLNARI 331
Query: 187 PPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P++ I + + + C+ + V W H+GV + L +T + +L I
Sbjct: 332 QPRVQIINSGESATMNCTVEGYPVESVE--WLHDGVPV----LTAQDTRIRLLAPLVLVI 385
Query: 246 TNASFADAGEYECVVKS 262
+ D G Y+C+V+S
Sbjct: 386 GSVGRKDKGMYQCLVRS 402
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 103/289 (35%), Gaps = 33/289 (11%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLP-----LEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+C A G P +W + + + +P L + YF + E A Y
Sbjct: 45 SCSAHGSPTPHVTWITSPDQRSVTAVPGLRQLLGNGTLYFPP---FLAQDFRAEVHNARY 101
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV- 122
+CRA + + T S LR + P + R S EG N + C K
Sbjct: 102 RCRATSSVGTVLSREVTLRAVLTVPGYDVRVNRSPVL--EGCNAVLSCTAREDVKEHLTV 159
Query: 123 --WKKDGNII-----GSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRL 174
W +D I+ +GGR + G+L I DD YSC + + +
Sbjct: 160 TSWFRDDAILLPGSTDTGGRFVVTSQGDLHIRATRPDDGRATYSCLTFHALTGERRRSEP 219
Query: 175 IVLHGPSYYEQLPPK------ITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L +PP+ I I+A ++ L CSA A+ NG I
Sbjct: 220 ATLTVTEPTGTMPPRLMQRSQIAISAESGSDVHLTCSAQGNPAPQFAWYRDVNGHSIPVE 279
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I + G L++I DAG Y C + +G+ +T + V
Sbjct: 280 SFGR-----IQLWGDLMQIRRVDAQDAGRYICRASNQIGEQRAETHLSV 323
>gi|328783969|ref|XP_396307.4| PREDICTED: LOW QUALITY PROTEIN: immunoglobulin-like and fibronectin
type III domain containing 6 [Apis mellifera]
Length = 1895
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 219/512 (42%), Gaps = 50/512 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++A +T T + +P + +SW ++GE L S +L +E++ F ++L + L+ R
Sbjct: 554 SRAQVTCTVTSGDLP-IYFSWLKDGEPLPS-SLRIEERVAEFF--SLLVFKELS-SRHSG 608
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
Y C A N +A+L ++ + P + P + T G NV C + P P+
Sbjct: 609 KYTCVATNSAAKVNHTAEL-LVKVPPQWIFEPQDVATLLGNPLNV--HCEAKGFPPPRVT 665
Query: 123 W----KKDGN-----IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
W ++ N I G+ GR I NG+L + D G Y C A N G SK
Sbjct: 666 WLRARERTSNDYQPLIDGTDGRLTILPNGSLWTASAGPQDEGHYLCRANNGIGSGLSKVI 725
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ +H P+ +E +TI ++ L C+ + ++V W HN R+ + + + L
Sbjct: 726 YVSVHEPARFEFQSKNVTIRRGESVTLDCTVIGDNPIEVQ--WMHNSDRL-DTNNHRLSI 782
Query: 234 PNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I D GL L I ++ D+G Y C + G+ + V+ P P ++V+E+
Sbjct: 783 SQIKTDNGLKSQLSIGSSDRQDSGVYRCTADNAYGRSEHLIYLAVQERPDPPASLEVIEI 842
Query: 291 HKTSATIQWTDGATNGRPITHYKIIART-------NWNSTWFNVSEHVIGKE-------- 335
S + W PI +Y I R+ +WN + + G
Sbjct: 843 GSRSIRLLWRRAFDGNSPIRNYVIQYRSLNHGLADDWNPAKTHNVTYTPGHSNNGNTIHP 902
Query: 336 -------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
+ + +E ++ L P TY F++ A N + P+ P T + P +
Sbjct: 903 TQNGLSPFETTSDDQEVALVGGLHPAVTYTFRIFAINSIDVSVPTDPV-VAKTQEEAPTE 961
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---QSETLKEYGNV 445
P I G+L +SW+P P+E N + Y + W + + + QS++L G
Sbjct: 962 PPQNIKVQSAGPGELMVSWQPPPKESCNGDLLGYIVTWSEHSSSTSGVNQSKSLTVNG-W 1020
Query: 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
V++ +T+Y++ ++A N + GP S
Sbjct: 1021 ATTKVQLTGLRKFTKYDISIRAFNSIASGPAS 1052
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 123/294 (41%), Gaps = 34/294 (11%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ +D+ TC A G P ++W+R+ +N ++P+E R + +++ IR ++ + D
Sbjct: 264 ESGSDVHLTCSAQGNPAPQFAWYRD---VNGHSIPVESFGRIQLWGDLMQIRRVDAQ-DA 319
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y CRA NQ+ + + L V T K + + +P +GE + T+ C E P
Sbjct: 320 GRYICRASNQVGEQRAETHLSV-TSKLNARIQPRVQIINSGE--SATMNCTVEGYPVESV 376
Query: 122 VWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT----NVHGMDESK-GRL 174
W DG + R ++ L+I V R D G+Y C N E K G
Sbjct: 377 EWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRKDKGMYQCLVRSDKENAQATAELKLGDT 436
Query: 175 IVLHGPSYYEQL----PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230
+ ++ EQ PP + LRCSA ++ W +G + +
Sbjct: 437 VPELQYTFIEQALRPGPP---------VSLRCSATGSP--PPSFTWLLDGEPLSEIASGH 485
Query: 231 LETPNINIDG-----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D L I++A D G Y CV +T+ + K + + GPP
Sbjct: 486 RYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNIYGPP 539
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 25/284 (8%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T C G P + W +G L +D + VL I + +D MYQC
Sbjct: 363 TMNCTVEGYPVESVEWLHDG----VPVLTAQDTRIRLLAPLVLVIGSVG-RKDKGMYQCL 417
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
++ + ++A+L++ P + +E G V++ C+ +P P F W DG
Sbjct: 418 VRSDKENAQATAELKLGDTVPELQYTFIEQALRPGP--PVSLRCSATGSPPPSFTWLLDG 475
Query: 128 ---NIIGSGGRRKIFE----NGNLL----ISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+ I SG R I + +G+++ IS +D G+Y+C A N E K RL +
Sbjct: 476 EPLSEIASGHRYAIGQYVDQSGDVISHLNISSAGAEDGGLYACVAANTLATVEHKARLNI 535
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPN 235
+GP + Q+ C+ + + L + + W +G + ++ + E
Sbjct: 536 -YGPPIMTPFNFPSNLQEGSRAQVTCTVTSGD-LPIYFSWLKDGEPLPSSLRIEE----R 589
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ LL S +G+Y CV ++ K++ ++V+ PP
Sbjct: 590 VAEFFSLLVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 633
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 31/257 (12%)
Query: 22 SWFRNGELLNSETLP--LEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQL---KTR 75
SWFR+ +L LP + R+ + L IR P+ A Y C + L + R
Sbjct: 179 SWFRDDAIL----LPGSTDTGGRFVVTSQGDLHIRAARPDDGRATYSCLTFHALTGERRR 234
Query: 76 YSSAQLRVL----TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--- 128
A L V T+ P +R + A G +V + C+ + P P+F W +D N
Sbjct: 235 SEPATLTVTEPTGTMPPRLMQRS-QIAISAESGSDVHLTCSAQGNPAPQFAWYRDVNGHS 293
Query: 129 -IIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+ S GR +++ G+L+ I V D+G Y C A+N G ++ L V ++
Sbjct: 294 IPVESFGRIQLW--GDLMQIRRVDAQDAGRYICRASNQVGEQRAETHLSVTS--KLNARI 349
Query: 187 PPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
P++ I + + + C+ + V W H+GV + L +T + +L I
Sbjct: 350 QPRVQIINSGESATMNCTVEGYPVESVE--WLHDGVPV----LTAQDTRIRLLAPLVLVI 403
Query: 246 TNASFADAGEYECVVKS 262
+ D G Y+C+V+S
Sbjct: 404 GSVGRKDKGMYQCLVRS 420
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 103/289 (35%), Gaps = 33/289 (11%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLP-----LEDQDRYFIQDNVLTIRYLNPERDPAMY 64
+C A G P +W + + + +P L + YF + E A Y
Sbjct: 63 SCSAHGSPTPHVTWITSPDQRSVTAVPGLRQLLGNGTLYFPP---FLAQDFRAEVHNARY 119
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV- 122
+CRA + + T S LR + P + R S EG N + C K
Sbjct: 120 RCRATSSVGTVLSREVTLRAVLTVPGYDVRVNRSPVL--EGCNAVLSCTAREDVKEHLTV 177
Query: 123 --WKKDGNII-----GSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRL 174
W +D I+ +GGR + G+L I DD YSC + + +
Sbjct: 178 TSWFRDDAILLPGSTDTGGRFVVTSQGDLHIRAARPDDGRATYSCLTFHALTGERRRSEP 237
Query: 175 IVLHGPSYYEQLPPK------ITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226
L +PP+ I I+A ++ L CSA A+ NG I
Sbjct: 238 ATLTVTEPTGTMPPRLMQRSQIAISAESGSDVHLTCSAQGNPAPQFAWYRDVNGHSIPVE 297
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I + G L++I DAG Y C + VG+ +T + V
Sbjct: 298 SFGR-----IQLWGDLMQIRRVDAQDAGRYICRASNQVGEQRAETHLSV 341
>gi|37537817|sp|Q90478.1|L1CA1_DANRE RecName: Full=Neural cell adhesion molecule L1.1; Short=N-CAM-L1.1;
Short=NCAM-L1.1
gi|1065714|emb|CAA61490.1| adhesion molecule L1.1 [Danio rerio]
Length = 1197
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 204/500 (40%), Gaps = 68/500 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCR 67
C+A G+P +W NG +P+ D R + L + + D A+YQC
Sbjct: 289 CKADGIPAPNITWSING-------VPVSGTDVDPRRRVSSGKLILSNVE-FSDTAVYQCE 340
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
A N+ + + + V+ L P+ P E A G V + C +P PK W+
Sbjct: 341 AVNKHGSILINTHVHVVEL-PAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILD 399
Query: 128 NIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGPSYY 183
+I S + NG+L IS VS +DS Y+C+ + + + ++ + GP
Sbjct: 400 SIPALSNAKISQTTNGSLKISNVSEEDSNRYTCSVSETNKSISADVEVLNRTKIVGP--- 456
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRI----GNMDLNELETPNINI 238
P + + + L C + L + W +G +I N +E+E
Sbjct: 457 ---PQNLHVIRGSDAILHCKYTVDHNLKSPTVQWNKDGHKITASTSNDKYHEIE------ 507
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L++ + D G Y C V +T+ + + V+ P P +++ E + S TI
Sbjct: 508 --GSLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITVQDKPDPPQSLKLSEKMERSVTIS 565
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW---- 354
W N P+T Y I E G+ D +K S+ + W
Sbjct: 566 WMPSVENNSPVTEYVI--------------EMNEGETPDEGQWQKYRSVSQDIDSWRSIC 611
Query: 355 --STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
S Y F++ A N +G P+ S Y+TPA KP P + + ISW+ + R
Sbjct: 612 SYSKYHFQIRAVNSIGTSAPTESSLSYSTPAAKPDTNPENVMTLSTDPKSMIISWQEMDR 671
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N P YK+FWR+ D S +V + + + + +E+KVQA+ND+G
Sbjct: 672 RQFNGPGFQYKVFWRRAAD----SGAHWTESSVSNPPLMVNNTGTFVSFEIKVQAVNDLG 727
Query: 473 PGPESEVVTIWHDPLVIISY 492
PE PL +I Y
Sbjct: 728 AAPE---------PLTVIGY 738
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 27/297 (9%)
Query: 25 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 84
R+G L + + + +D Y + + + P+ ++Y + + +K R R
Sbjct: 123 RDGNLYFANLIANDSRDDYTCNAHYINASIILPKEPMSIYVTPSNSVVKNR------RAK 176
Query: 85 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 144
P+ + S G +T+ C PE P P+ W + + + +K++ N L
Sbjct: 177 LHHPAGAR----SSYLVLRGQTLTLQCIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWL 232
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
I V D G Y CTA N + + V P Y+ + P + A ++L C A
Sbjct: 233 QIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAP-YWTRSPEEHLYAPGETVRLDCKA 291
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
++ W+ NGV + D++ P + G L ++N F+D Y+C +
Sbjct: 292 DGIPAPNIT--WSINGVPVSGTDVD----PRRRVSSGKLILSNVEFSDTAVYQCEAVNKH 345
Query: 265 GKISTKTTV-IVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI--THYKII 315
G I T V +VE LP + + AT T D T G P+ H++I+
Sbjct: 346 GSILINTHVHVVE----LPAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL 398
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 150/400 (37%), Gaps = 78/400 (19%)
Query: 119 PKFVWKKDGN-IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KDG+ I S K E G+L + V +D GIYSC + D + G + V
Sbjct: 483 PTVQWNKDGHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITV 542
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY---IWTHNGVRIGNMDLNELET 233
P PP+ L+ S E + +++ + ++ V +++NE ET
Sbjct: 543 QDKPD-----PPQ---------SLKLSEKMERSVTISWMPSVENNSPVTEYVIEMNEGET 588
Query: 234 PNINIDGGLLEITNASFADAGEYECV------------VKSTVGKISTKTTVIVEGPPGL 281
P D G + + D + + V S T++++ P
Sbjct: 589 P----DEGQWQKYRSVSQDIDSWRSICSYSKYHFQIRAVNSIGTSAPTESSLSYSTPAAK 644
Query: 282 PG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
P V + S I W D P YK+ R +
Sbjct: 645 PDTNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWR----------------RA 688
Query: 336 VDRYTGRKEASIEN--VLV----PWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKP 386
D E+S+ N ++V + ++E KV A N+LG ++P P + D P
Sbjct: 689 ADSGAHWTESSVSNPPLMVNNTGTFVSFEIKVQAVNDLG----AAPEPLTVIGYSGEDFP 744
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNV 445
+APS + + + + W P+ E + YKI+ R K E + GN
Sbjct: 745 LEAPSALSVTELQKTSVMVRWSPVRPESVRGHLLGYKIYLRMKGSQWETPGRAVSSSGNP 804
Query: 446 GI------AVVRIPSEF-YYTEYEVKVQAINDVGPGPESE 478
+ A +I S+ +Y++Y + + A N G GP SE
Sbjct: 805 TVIEVPADAAEKIVSDLQFYSDYTLTITAFNSKGEGPHSE 844
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 61/293 (20%)
Query: 17 PDVTYSWFRNGE-----LLNSETL-PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
P ++ W ++G+ L S TL P D +F Q Y+C A N
Sbjct: 7 PSPSFRWVKDGKQFGEVLSESGTLTPHPTMDLHFYQ---------------GTYRCYAAN 51
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW-KKDGN 128
+L T S+ PS K + G + + CN P+++ PK W +
Sbjct: 52 ELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVTPKIHWMDMQFH 111
Query: 129 IIGSGGRRKIFENGNL----LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
I R I +GNL LI+ SRDD Y+C N H ++ S I+L
Sbjct: 112 HIPLNERVTISRDGNLYFANLIANDSRDD---YTC---NAHYINAS----IILPKEPMSI 161
Query: 185 QLPPKITIAAHRNLQLR--CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN---ID 239
+ P ++ +R +L A + L+ T + G L TP ++ ID
Sbjct: 162 YVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLQCIPEG------LPTPEVHWDRID 215
Query: 240 GGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
L L+I N +D GEY C +++ + TV VE P
Sbjct: 216 SALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAP 268
>gi|405960111|gb|EKC26058.1| Neuroglian [Crassostrea gigas]
Length = 1279
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 204/478 (42%), Gaps = 43/478 (8%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
T C A G P T W+ +G+ + +P + +IQ+NV+ I LN +++ + QC
Sbjct: 360 TVNCTAVGNPTPTVEWYIDGKPFKA--IP----GKRYIQNNVIHIDNLN-KKESTVVQCN 412
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
A N + +S + VL L P + AG + C P P W +
Sbjct: 413 ATNSHGSLFSDVYINVLALPPEITNWTKSLKVAAGRSA--VLSCEHNGYPTPTLEWMRGP 470
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV--------LHG 179
++ G R F ++ I VS++D G++ C + N G ++ + LIV L G
Sbjct: 471 QLLN--GDRYNFTQTSITILNVSKNDEGVFICISKNNQGREQKENMLIVRDKTSIKDLTG 528
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
+ E+ I + + +++ C A T+ V Y+W NG I + P++ +
Sbjct: 529 ITETEEGKTSIEVDSDEDVKFTCIAMTDPREMVRYVWKKNGKVI-----KDFGDPHVRCE 583
Query: 240 GG--LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
G +L + A +G Y CV + + + + V+ P P V++ +
Sbjct: 584 EGCSVLRVQEADATQSGNYTCVANNGIDEDQRTIELRVKAAPDRPDDVKLTSCGDWKLGL 643
Query: 298 QWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
QW+ G N PI +Y I T+++ W + + D T + S+ ++
Sbjct: 644 QWSAGFHNYMPIINYTIEYSTSFDWDKW-----TTLYQTSDSNTKVSDVSLSAGVI---- 694
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG-GKIGDLSISWEPLPREKQ 415
Y+F++ A N+ GY EPS P+ T +P + P+ + K G L + WE + +
Sbjct: 695 YKFRIKALNQKGYSEPSEPTNTCKTDPKRPARHPTGVKVKDYKKDGFLYVEWEAISPMEH 754
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYEVKVQAINDVG 472
N + YK+ R D + K Y G + I ++ Y +Y V+V A N VG
Sbjct: 755 NGEDFKYKLSVRNIAD-----DNTKSYIVAGDKTSKEIETKDTYQKYGVRVAAENSVG 807
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 108/297 (36%), Gaps = 34/297 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+ + C G P T SW R G + E+ E L I + P D Y C
Sbjct: 273 VKFMCIFSGYPTPTISWRRVGRA-SEESSGYE-----------LVISAVKPS-DKGEYVC 319
Query: 67 RAKNQLKTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
N + + V + KP++ PL++ GE G T+ C P P W
Sbjct: 320 SGTNSVTGNPQEVKFMVDVQAKPTWVSPPLDTRVSVGESG--TVNCTAVGNPTPTVEWYI 377
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + ++ +N + I +++ +S + C ATN HG S + VL P
Sbjct: 378 DGKPFKAIPGKRYIQNNVIHIDNLNKKESTVVQCNATNSHGSLFSDVYINVLALPPEITN 437
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNINIDGG 241
+ +AA R+ L C HNG ++ L N
Sbjct: 438 WTKSLKVAAGRSAVLSCE--------------HNGYPTPTLEWMRGPQLLNGDRYNFTQT 483
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
+ I N S D G + C+ K+ G+ + +IV + + E + +I+
Sbjct: 484 SITILNVSKNDEGVFICISKNNQGREQKENMLIVRDKTSIKDLTGITETEEGKTSIE 540
>gi|195132705|ref|XP_002010783.1| GI21512 [Drosophila mojavensis]
gi|193907571|gb|EDW06438.1| GI21512 [Drosophila mojavensis]
Length = 2220
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 200/487 (41%), Gaps = 42/487 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRAK 69
C+ G P WFRN E ++++ L Y ++ DN L I+ L E D M+QC A
Sbjct: 380 CDVVGDPTPQVQWFRNAERIDAQLL----SGGYSVKADNTLIIKKLTLE-DEGMFQCLAT 434
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
N+ + + LRV T P ++ P A +G + TI C AP P W +
Sbjct: 435 NEAGEKSAYTWLRVKTSAPIMEQPP--QNVTALDGKDATISCRAAGAPNPNITWIYNETQ 492
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
++ R +I E+G+LLIS + D+G+Y C N G + + L VL Q P
Sbjct: 493 LVELSSRVQILESGDLLISSIRAADAGLYICVRANEAGSVKGEAYLSVLVRTQII-QPPV 551
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
T+ L+C ++ + W G ++ + + DG L EI
Sbjct: 552 DTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQSTPIVNSQRV---GVQADGQL-EIQAV 607
Query: 249 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV---EVHKTSATIQWTDGATN 305
+D G Y CVV S G + + V P P V+V E H+ S + WT G
Sbjct: 608 RASDVGSYACVVTSPGGNETRSAMLSVIELPFPPSNVRVERLPEPHQRSINVSWTPGFDG 667
Query: 306 GRPITHYKIIARTNWNSTWF--NVSEHVIG--KEVDRYTGRKEASIENVLVPWSTYEFKV 361
PI + I R F V + ++ E+ + + + + L + Y+F+V
Sbjct: 668 NSPIAKFIIQRREVSELEKFVGPVPDPLLNWITELTNVSADQRWIVLDNLKAATVYQFRV 727
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N +G G PS PS P + P P G + ++ W+P E +N +
Sbjct: 728 SAVNRVGEGSPSEPSNIVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILG 787
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE----------FYYTEYEVKVQAINDV 471
Y + +R L Y NV + I +E + +Y V++ A N++
Sbjct: 788 YILRYR-----------LYGYNNVPWSYQNITNEAQRNFLIQELITWKDYIVQIAAYNNM 836
Query: 472 GPGPESE 478
G G +E
Sbjct: 837 GVGVYTE 843
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 64 YQCRAKNQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y C+ + L++ R +A V L+P P+ +ET+ GG V + C+ P P+
Sbjct: 332 YTCQVR--LRSGGFRTVTASAHVYILEPPMFFTPMRAETFGDFGGQVMLPCDVVGDPTPQ 389
Query: 121 FVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W ++ I + G + + L+I ++ +D G++ C ATN G + L V
Sbjct: 390 VQWFRNAERIDAQLLSGGYSVKADNTLIIKKLTLEDEGMFQCLATNEAGEKSAYTWLRVK 449
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237
EQ P +T ++ + C A ++ +I+ L EL +
Sbjct: 450 TSAPIMEQPPQNVTALDGKDATISCRAAGAPNPNITWIYNET-------QLVELSSRVQI 502
Query: 238 IDGGLLEITNASFADAGEYECVVKSTVGKI 267
++ G L I++ ADAG Y CV + G +
Sbjct: 503 LESGDLLISSIRAADAGLYICVRANEAGSV 532
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 21/227 (9%)
Query: 256 YECVVKSTVGKISTKTTVIVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 311
+E + +G+ + KT I G P P + + + S +Q+T G IT
Sbjct: 1037 FEICAWTRIGRGTPKTATIQSGVEPVLPHAPTNLALSNIEAFSVVLQFTPGFDGNSSITK 1096
Query: 312 YKIIARTNWNSTWFNVSE-HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
+K+ A+T N TWF + E E TG L+P++ Y ++ A N +G
Sbjct: 1097 WKVEAQTARNMTWFTICEISDPDAETLTVTG---------LMPFTQYRLRLSATNVVGSS 1147
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK----QNAPNIYYKIFW 426
PS P+ + T +P AP + L + W PL + + NI Y+
Sbjct: 1148 RPSEPTKDFQTIQARPMHAPYNVTVRAMSAQQLRVRWIPLQQTEWFGNPRGYNITYRQVE 1207
Query: 427 RKKNDTEF-QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
K TL E V+ E +T YEV + A NDVG
Sbjct: 1208 HKAGTIRHPPRSTLIEDHTANSHVLDGLEE--WTLYEVLINACNDVG 1252
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 37/278 (13%)
Query: 10 TCEAF-GVPDVTYSWFRNGELLNSETLPLED--QDRYFIQDNVLTIRYLNPER-DPAMYQ 65
+C + G P TY W ++G +P+ D +++ R N +R D YQ
Sbjct: 91 SCSCYAGSPQPTYRWLKDG-------IPVADYSSSQFY--------RIHNTKREDAGSYQ 135
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGE-GGNVTIFCNP--EAAPKPKFV 122
C A+N+ + +S V++ +F+ + +E Y G+ IF P ++ PKP
Sbjct: 136 CIARNEAGSIFSEKSEVVVSYMGTFENK---NEGYLTVVSGHPAIFDMPAIDSVPKPSVS 192
Query: 123 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH-GMDESKGRL-IVLHGP 180
W+ + + + + + L++ D Y A N G +E+ + + + G
Sbjct: 193 WQAENRTLNYDIKYALTQANQLIVLSADEQDRHAYRAHAMNTQLGREEASAPIHLNVTGD 252
Query: 181 SYYEQLPPKITIAAHRNL-------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
+ E P I L +L+C A+ L ++ IW +G+ + N + L T
Sbjct: 253 PFVEVAPEIIVPPQDLKLKRGEGVAELQCIANARPLHELETIWLKDGLPVENAGI--LHT 310
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 271
N N L + A+ + AGEY C V+ G T T
Sbjct: 311 LN-NPWNRTLALLQANSSHAGEYTCQVRLRSGGFRTVT 347
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 46/241 (19%)
Query: 269 TKTTVIVEGPPGLP----GGVQVVEVHKTSATIQWT---------DGATNGRPITHYKII 315
++ +++V P P GG++VV + TS + W+ D AT G I + ++
Sbjct: 1556 SRESIVVRTLPAAPAVGVGGLKVVPITTTSVRVHWSALETGMWNGDAATGGYRILYQQLS 1615
Query: 316 AR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 374
T ST V+G V+ + + + L YE V+ N G G +
Sbjct: 1616 DFPTALQST---PKTDVMGINVN-------SVVLSDLTQDRNYEIVVLPFNSQGPGPATP 1665
Query: 375 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW-------- 426
P+ Y A P P + ++ + W+P + QN + YKIF+
Sbjct: 1666 PAAVYVGEA-VPTGEPRAVDAAAISSTEVRLRWKPPKQSMQNGDILGYKIFYLVTYSPQA 1724
Query: 427 ----RK-KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
RK + + E S T + V + YTEY +++ A N G GP S VT
Sbjct: 1725 LEPGRKWEEEIEVVSATATSHSLVFLD--------KYTEYRIQLLAFNPAGDGPRSAPVT 1776
Query: 482 I 482
+
Sbjct: 1777 V 1777
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 24/214 (11%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
P +P V ++ T WT G P+ +Y + R N W + E V V
Sbjct: 1472 PSVPQ-VSRSQIQAHQITFSWTPGRDGFAPLRYYTVQMREN-EGPWQPLPERV-DPLVSS 1528
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 398
YT L P++TY+F++ A N+LG PS+ S + P AP+ +G GG
Sbjct: 1529 YTAVG-------LKPYTTYQFRIQATNDLG---PSAFSRESIVVRTLP-AAPA-VGVGGL 1576
Query: 399 KI-----GDLSISWEPLPREKQN--APNIYYKIFWRKKND--TEFQSETLKEYGNVGIAV 449
K+ + + W L N A Y+I +++ +D T QS + + +
Sbjct: 1577 KVVPITTTSVRVHWSALETGMWNGDAATGGYRILYQQLSDFPTALQSTPKTDVMGINVNS 1636
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
V + YE+ V N GPGP + ++
Sbjct: 1637 VVLSDLTQDRNYEIVVLPFNSQGPGPATPPAAVY 1670
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 77/205 (37%), Gaps = 25/205 (12%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
E PG P V +V + A I W I Y++ N ++ E
Sbjct: 1368 EDTPGAPSNVSFPDVTFSMARIIWDVPDDPNGEILAYQVTYTLNGSANLNYSREFPPSDR 1427
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
R T L+P Y F V A LG+G+ +S D+P QAPS
Sbjct: 1428 TFRATQ---------LLPERYYTFSVTAQTRLGWGKTASVLVYTTNNRDRP-QAPSVPQV 1477
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ------SETLKEYGNVGIAV 449
+I I++ P AP YY + R+ N+ +Q + Y VG+
Sbjct: 1478 SRSQIQAHQITFSWTPGRDGFAPLRYYTVQMRE-NEGPWQPLPERVDPLVSSYTAVGLKP 1536
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPG 474
YT Y+ ++QA ND+GP
Sbjct: 1537 --------YTTYQFRIQATNDLGPS 1553
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 113/534 (21%), Positives = 201/534 (37%), Gaps = 100/534 (18%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN----VLTIRYLNPERDP 61
D T +C A G P+ +W N ET +E R I ++ + +IR D
Sbjct: 469 DATISCRAAGAPNPNITWIYN------ETQLVELSSRVQILESGDLLISSIR----AADA 518
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
+Y C N+ + A L VL ++ + P+++ G T+ C + P +
Sbjct: 519 GLYICVRANEAGSVKGEAYLSVL-VRTQIIQPPVDTTVLLGL--TATLQCKVSSDPSVPY 575
Query: 122 V--WKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W ++G I + R + +G L I V D G Y+C T+ G + L V+
Sbjct: 576 NIDWYREGQSTPIVNSQRVGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRSAMLSVI 635
Query: 178 HGPSYYEQLPPKITIAAHRNLQL-RCSAHTEELLDVAYIWTHNG------VRIGNMDLNE 230
P PP N+++ R + ++V++ +G I +++E
Sbjct: 636 ELP-----FPPS-------NVRVERLPEPHQRSINVSWTPGFDGNSPIAKFIIQRREVSE 683
Query: 231 LET----------------PNINIDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTV 273
LE N++ D + + N A ++ + VG+ S ++ +
Sbjct: 684 LEKFVGPVPDPLLNWITELTNVSADQRWIVLDNLKAATVYQFRVSAVNRVGEGSPSEPSN 743
Query: 274 IVEGPPGLPGG--VQVVEVHKTSATI--QWT---DGATNGRP---ITHYKIIARTNWNST 323
IVE P P G V V ++ + I QW + NG+ I Y++ N +
Sbjct: 744 IVELPQEAPSGPPVGFVGSARSMSEIITQWQPPLEEHRNGQILGYILRYRLYGYNNVPWS 803
Query: 324 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 383
+ N++ E R +E L+ W Y ++ A N +G G + + T
Sbjct: 804 YQNIT-----NEAQRNFLIQE------LITWKDYIVQIAAYNNMGVGV-YTEGAKIKTKE 851
Query: 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 443
P P+ + + ISW P ++ N N YKI +++ E EY
Sbjct: 852 GVPEAPPTNLRVLALNSTAVQISWTPPNPQQINGINQGYKIQAWQQHLIE------GEYQ 905
Query: 444 NVGIAVVRIPSEFY---------------YTEYEVKVQAINDVGPGPESEVVTI 482
++ ++ +P Y +Y + V D G G S+ V++
Sbjct: 906 DLEKRMITVPPSLIDPLAEQTATLNGLDKYAKYNITVLCFTDPGDGVISQKVSV 959
>gi|242003928|ref|XP_002422911.1| protein sidekick precursor, putative [Pediculus humanus corporis]
gi|212505804|gb|EEB10173.1| protein sidekick precursor, putative [Pediculus humanus corporis]
Length = 2095
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 194/483 (40%), Gaps = 39/483 (8%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T CEA G+P +W+RN E LN LP Q +D L I+ L E D M+QC
Sbjct: 284 ITLPCEAVGIPVPKITWYRNSEKLN--ILPNGGQQYTLQEDGSLLIKKLRME-DTGMFQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK-K 125
A N+ + L+V T P + P+ +G + + C AP P W +
Sbjct: 341 LASNEAGEDSAYTWLKVKTAAPVMENPPVNVTIL--DGKDAIMSCGAVGAPTPNVTWYYR 398
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
D + + GR +I E+G+LLI+ D+G Y+C N G ++ L +L Q
Sbjct: 399 DLDQVEPSGRIQILESGDLLIADTREFDAGKYTCVRMNEAGSVQASAYLGILVRTQII-Q 457
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINIDGGLLE 244
P + L+C + + W HN +I + + T P+ G LE
Sbjct: 458 PPVDTRVLLGHTATLQCKVSGDPSVPYNITWYHNEEKIVEGSSSRIFTHPD-----GTLE 512
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE---VHKTSATIQWTD 301
I +D GEY C ++S G + + V P P V+ V + + + WT
Sbjct: 513 IQAVRASDVGEYSCSLRSPGGNETRNGKLNVIELPFAPLNVKAERFPSVSQRAVNVSWTP 572
Query: 302 GATNGRPITHYKIIAR----------TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
G I Y I R NW + NVS +K + N L
Sbjct: 573 GFDGNSAIVKYIIQKREVSDLGSEIFMNWVTELSNVS-----------ADQKWVLLTN-L 620
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
S+Y F+V A N +G G PS PS P + P P G ++ + W+P
Sbjct: 621 KAASSYHFRVSAVNSVGEGSPSEPSNLVILPQEAPSGPPLGFVGSARSSSEIIVQWQPPL 680
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
E +N + Y I +R E T++ N IP + +Y V++ A N+
Sbjct: 681 EEHRNGHILGYIIRFRLFGYNE-SPWTVRNITNEAQKNYLIPDLITWKDYVVQIAAYNNK 739
Query: 472 GPG 474
G G
Sbjct: 740 GVG 742
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 185/456 (40%), Gaps = 93/456 (20%)
Query: 64 YQCRAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
Y C+ + + T SSA + V+ KPSF +++ET G +T+ C P PK
Sbjct: 240 YTCQVRLRTGGFPTVTSSANV-VVYEKPSFASN-MKTETLGEYGSPITLPCEAVGIPVPK 297
Query: 121 FVWKKDG---NIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W ++ NI+ +GG++ + E+G+LLI + +D+G++ C A+N G D + L V
Sbjct: 298 ITWYRNSEKLNILPNGGQQYTLQEDGSLLIKKLRMEDTGMFQCLASNEAGEDSAYTWLKV 357
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE-TPN 235
E P +TI ++ + C A +V + + DL+++E +
Sbjct: 358 KTAAPVMENPPVNVTILDGKDAIMSCGAVGAPTPNVTWYY---------RDLDQVEPSGR 408
Query: 236 INI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT-------TVIVEGPPGLPGGVQV 287
I I + G L I + DAG+Y CV + G + T I++ P V
Sbjct: 409 IQILESGDLLIADTREFDAGKYTCVRMNEAGSVQASAYLGILVRTQIIQPP------VDT 462
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ +AT+Q +G P Y I TW++ E ++ E S
Sbjct: 463 RVLLGHTATLQ---CKVSGDPSVPYNI--------TWYHNEEKIV-----------EGSS 500
Query: 348 ENVLV-PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ P T E + + +++G +Y+ P +R GK+ + +
Sbjct: 501 SRIFTHPDGTLEIQAVRASDVG---------EYSCSLRSPGGNETR----NGKLNVIELP 547
Query: 407 WEPL-------PREKQNAPNIYY-----------KIFWRKKNDTEFQSET----LKEYGN 444
+ PL P Q A N+ + K +K+ ++ SE + E N
Sbjct: 548 FAPLNVKAERFPSVSQRAVNVSWTPGFDGNSAIVKYIIQKREVSDLGSEIFMNWVTELSN 607
Query: 445 VGIAV--VRIPSEFYYTEYEVKVQAINDVGPGPESE 478
V V + + + Y +V A+N VG G SE
Sbjct: 608 VSADQKWVLLTNLKAASSYHFRVSAVNSVGEGSPSE 643
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 256 YECVVKSTVGKISTKTTVIVEGP----PGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 311
+E ++VG +K I G P P + V + S +Q+T G IT
Sbjct: 932 FEVSAWTSVGSGPSKVATIQSGVEPVLPTPPTRLAVTNIEAFSVVLQFTPGFDGNSSITK 991
Query: 312 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGY 369
+ + +T N +WFNV E +AS V LVP++TY ++IA N +G
Sbjct: 992 WIVEGQTARNLSWFNVFE----------VSDPDASTITVTDLVPFTTYRLRLIAKNVVGT 1041
Query: 370 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429
EPS P+ ++ T P P + +L + W PL + + Y I + +
Sbjct: 1042 SEPSEPTKEFQTIQAPPAHPPRNVTVRAMSATELRVRWIPLQQIEWFGNPRGYNITFTEI 1101
Query: 430 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
N + +S ++++ ++ EF YE+ + + NDVG
Sbjct: 1102 NSSNQRSVIIEDH-TANSHILEHLEEFAL--YEITMSSFNDVG 1141
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 98/258 (37%), Gaps = 23/258 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A G P Y W ++G L + D F + I + E D YQC AKN
Sbjct: 34 CQARGFPQPEYKWLKDG-------LSISD----FSSELFYRIHGIKRE-DAGSYQCIAKN 81
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVWKKDGN 128
+ + +S + F+ L T + E G I P E+ P+P +WK D
Sbjct: 82 DVGSIFSQKSDVSVAYMGGFED--LTERTMSVESGEAAILNLPQIESHPQPSVIWKSDSG 139
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH-GMDESKGRLIVLHGPSYYEQLP 187
+ + + + L+I S +D Y TN G +E G + +L ++
Sbjct: 140 SLPYDRKFAVTTDHRLVILSTSSEDQKSYRAHVTNTQLGKEEMSGFIRLLVTGDDNREIA 199
Query: 188 PKITIAAHRNLQLRCSAHT------EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
P+I I ++ ++T + L ++ TH G + L P +
Sbjct: 200 PEIIIKPQNLTIVKGISYTFTDPWNKTLSLLSVNLTHTGKYTCQVRLRTGGFPTVTSSAN 259
Query: 242 LLEITNASFADAGEYECV 259
++ SFA + E +
Sbjct: 260 VVVYEKPSFASNMKTETL 277
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE V+ N G G PS P Y A P P + ++ + W P + +QN
Sbjct: 1536 YEIIVVPFNSQGDGPPSPPVTVYVGEA-VPTGEPRNLECEPVSSTEVRLKWIPPIQSQQN 1594
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---YTEYEVKVQAINDVGP 473
+ YKIF+ N + +E V A S + +TEY +++ A N G
Sbjct: 1595 GDLLGYKIFYLVTNSPQEIDRKTEEEIEVVPATYNSHSLVFLDKFTEYRIQMLAFNPAGD 1654
Query: 474 GPESEVVTI 482
GP S VT+
Sbjct: 1655 GPRSAPVTV 1663
>gi|241738292|ref|XP_002414055.1| cell adhesion molecule, putative [Ixodes scapularis]
gi|215507909|gb|EEC17363.1| cell adhesion molecule, putative [Ixodes scapularis]
Length = 958
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 216/493 (43%), Gaps = 44/493 (8%)
Query: 15 GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 74
G P V W ++G L + + F LT + P+ Y C A+N
Sbjct: 312 GDPPVFIGWLKDGRPLTQDLGAHTEMLNTFTSS--LTFHSVGPKHS-GNYTCVARNPAAA 368
Query: 75 RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-------DG 127
SA + V + P ++K+P++ GE +V I C + P P+ WKK +
Sbjct: 369 VNRSATMTV-KVPPYWRKQPMDKAGILGE--SVLIDCQADGVPHPQIRWKKMIPGPPVES 425
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
I S +I ENG+L++ + +D+G Y C ATN S+ + +H P++++
Sbjct: 426 QTIISNPYIQILENGSLVLREIGLNDAGEYMCQATNNVKPSLSEVIKLRVHVPAFFKTQF 485
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL----NELET--PNINIDGG 241
+ ++++RC A+ E+ +++ WT + +I N D E T P +
Sbjct: 486 SSQNVRKGEDVRIRCEAYGEKPINIT--WTKDR-QILNFDTETRYKETSTTFPERLVSEI 542
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L++ T+ D+ + C+ + G+ T ++V+ P P + + EV S + W
Sbjct: 543 LVKATDRR--DSSLFTCMASNAYGRDETNFQIVVQEKPDSPRNLNIKEVTSQSVAMAWMQ 600
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV----PWSTY 357
+ P+T Y I + + + W D + R S +V+V P +TY
Sbjct: 601 PYSGNLPLTSYVIQYKKD-SEQW----------TPDVMSARNSPSDLSVVVRNLNPVTTY 649
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
F+V+A N LG+G PS T + P P+ I + I W+ P E++ +
Sbjct: 650 NFRVLAENSLGHGNPSE-VVSVITKEEAPSNPPTEIQIEPTSSKSIKIKWKAPPSEERRS 708
Query: 418 P-NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
P YY + ++ ++ +TL+ N I + + TEY +++QA N G GP
Sbjct: 709 PVKGYYLGYKLHRSGEQYVYKTLESARNGEIEEFLLSNLRRNTEYSIRLQAFNSAGSGPA 768
Query: 477 SEVV---TIWHDP 486
SE + T+ HDP
Sbjct: 769 SEEIVAKTLEHDP 781
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 32/277 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L C G P SW ++ PL DR I N + + +D MYQC
Sbjct: 19 LRLNCSTEGYPVREVSWTKDSR-------PLYTSDRIKIIYNEVLVVNGVKRQDRGMYQC 71
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLES---ETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ +T +++++ ++ + + + LE+ E+ GG+V++ C P P+ W
Sbjct: 72 FVRNRFETVQAASEV-IINGENTHEPPVLENIFPESIHKPGGSVSLRCTATGNPLPQVTW 130
Query: 124 KKDGNIIGSGGRRKIFEN--------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
DG + R ++ + + IS V +D GIY C A+N G+ R+
Sbjct: 131 DLDGRHLPETIRYRVGDYVTRDNRVVSYVNISSVRTEDGGIYRCRASNDVGLASHMARVN 190
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELET 233
V P+ +L +T + NL + C L A W +G + G+ L
Sbjct: 191 VYGPPTI--RLMGNVTALSGGNLVVHCPVGGYPL--TAIRWERDGRTLPSGHRQL----- 241
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
++ +G L+ AD G YECV ++ G I+ +
Sbjct: 242 --VHANGTLVVSEVNRKADEGTYECVAENGRGDIARR 276
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 107/508 (21%), Positives = 196/508 (38%), Gaps = 79/508 (15%)
Query: 11 CEAFGVPDVTYSWFRN--GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
C+A GVP W + G + S+T+ + + +++ L +R + D Y C+A
Sbjct: 402 CQADGVPHPQIRWKKMIPGPPVESQTI-ISNPYIQILENGSLVLREIG-LNDAGEYMCQA 459
Query: 69 KNQLKTRYSSA-QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N +K S +LRV P+F K S+ +G +V I C W KD
Sbjct: 460 TNNVKPSLSEVIKLRVHV--PAFFKTQFSSQN-VRKGEDVRIRCEAYGEKPINITWTKDR 516
Query: 128 NIIGSGGRRKIFENGN---------LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
I+ + E +L+ R DS +++C A+N +G DE+ +++V
Sbjct: 517 QILNFDTETRYKETSTTFPERLVSEILVKATDRRDSSLFTCMASNAYGRDETNFQIVVQE 576
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL---------- 228
P + RNL ++ T + + +A++ ++G N+ L
Sbjct: 577 KPD------------SPRNLNIK--EVTSQSVAMAWMQPYSG----NLPLTSYVIQYKKD 618
Query: 229 NELETPNI----NIDGGL-LEITNASFADAGEYECVVKSTVGKISTKTTVIV----EGPP 279
+E TP++ N L + + N + + + ++++G + V V E P
Sbjct: 619 SEQWTPDVMSARNSPSDLSVVVRNLNPVTTYNFRVLAENSLGHGNPSEVVSVITKEEAPS 678
Query: 280 GLPGGVQVVEVHKTSATIQWTDGATNGR--PITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
P +Q+ S I+W + R P+ Y + + + + ++V
Sbjct: 679 NPPTEIQIEPTSSKSIKIKWKAPPSEERRSPVKGYYLGYKLHRSG-----EQYVYKTLES 733
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
G E + + L + Y ++ A N G G S D P +P I
Sbjct: 734 ARNGEIEEFLLSNLRRNTEYSIRLQAFNSAGSGPASEEIVAKTLEHDPP--SPPSIRVQS 791
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIF---WRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ + WEP P N ++YK W K++ Q + E G
Sbjct: 792 TTATSVHLVWEP-PDIPVNGYVLHYKEDQNDWVKQHVPGTQQSIVLEQLRCG-------- 842
Query: 455 EFYYTEYEVKVQAINDVGPGPESEVVTI 482
T Y++ ++A ND G G ++V+++
Sbjct: 843 ----TRYQLYMEAFNDAGKGDPTQVLSV 866
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
A G ++ + C+ E P + W KD + + R KI N L+++ V R D G+Y C
Sbjct: 13 ASIGHSLRLNCSTEGYPVREVSWTKDSRPLYTSDRIKIIYNEVLVVNGVKRQDRGMYQCF 72
Query: 161 ATNVHGMDESKGRLIV----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 216
N ++ +I+ H P E + P+ ++ LRC+A L V W
Sbjct: 73 VRNRFETVQAASEVIINGENTHEPPVLENIFPESIHKPGGSVSLRCTATGNPLPQVT--W 130
Query: 217 THNG--------VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268
+G R+G+ + N + I++ D G Y C + VG S
Sbjct: 131 DLDGRHLPETIRYRVGDYVTRD------NRVVSYVNISSVRTEDGGIYRCRASNDVGLAS 184
Query: 269 TKTTVIVEGPPGL 281
V V GPP +
Sbjct: 185 HMARVNVYGPPTI 197
>gi|198467771|ref|XP_002133856.1| GA27700 [Drosophila pseudoobscura pseudoobscura]
gi|198146100|gb|EDY72483.1| GA27700 [Drosophila pseudoobscura pseudoobscura]
Length = 2227
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 205/492 (41%), Gaps = 52/492 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAK 69
C+ G P WFRN E + + RY + +DN L I+ L + D AM+QC A+
Sbjct: 386 CDVVGEPTPQVEWFRNAESVEANV----QSGRYSLGEDNTLIIKKLILD-DAAMFQCLAR 440
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
N+ +S LRV T P F++ P A +G + TI C +P P W +
Sbjct: 441 NEAGENSASTWLRVKTSAPVFEQPP--QNVTALDGKDATISCRAIGSPNPNVTWIYNETQ 498
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
++ R +I E+G+LLIS + D+G+Y C N G + + L VL + PP
Sbjct: 499 LVEISSRVQILESGDLLISNIRPSDAGLYICVRANEAGSVKGEALLSVLVRTQIIQ--PP 556
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD-LNELETPNINIDGGLLEITN 247
TI L L + + D + + + R G M ++ + + DG L EI
Sbjct: 557 VDTIVL---LGLTATLQCKVSSDPSVPYNIDWYREGQMAPISNSQRIGVQADGQL-EIQA 612
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV---EVHKTSATIQWTDGAT 304
+D G Y CVV S G + + V P P V+V E + S + WT G
Sbjct: 613 VRASDVGSYSCVVTSPGGNETRAARLSVIELPFPPSNVRVERLPEPQQRSINVSWTPGFD 672
Query: 305 NGRPITHYKIIAR----------------TNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
PI+ + I R NW + NVS + ++ +E
Sbjct: 673 GNSPISKFIIQRREVSELEKFVGPVPDPLLNWITELSNVSAN-----------QRWILLE 721
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
N L + Y+F+V A N +G G PS PS P + P P G + ++ W+
Sbjct: 722 N-LKAATVYQFRVSAINRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQ 780
Query: 409 PLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
P E +N + Y + +R N+ + + + + + + +Y V++
Sbjct: 781 PPQEEHRNGQILGYILRYRLFGYNNVPWSYQNITNEAQRNFLIQEL---ITWKDYIVQIA 837
Query: 467 AINDVGPGPESE 478
A N++G G +E
Sbjct: 838 AFNNMGVGVYTE 849
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 134
SA RV L+P P+ +ET+ GG V + C+ P P+ W ++ + + G
Sbjct: 353 SASARVQILEPPVFFTPMRAETFGEFGGQVQLPCDVVGEPTPQVEWFRNAESVEANVQSG 412
Query: 135 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 194
R + E+ L+I + DD+ ++ C A N G + + L V +EQ P +T
Sbjct: 413 RYSLGEDNTLIIKKLILDDAAMFQCLARNEAGENSASTWLRVKTSAPVFEQPPQNVTALD 472
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 254
++ + C A +V +I+ L E+ + ++ G L I+N +DAG
Sbjct: 473 GKDATISCRAIGSPNPNVTWIYNET-------QLVEISSRVQILESGDLLISNIRPSDAG 525
Query: 255 EYECVVKSTVGKI 267
Y CV + G +
Sbjct: 526 LYICVRANEAGSV 538
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 99/252 (39%), Gaps = 21/252 (8%)
Query: 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----PGLPGGVQ 286
+++ N+ D L + +E + VG KT I G P P +
Sbjct: 1018 MKSFNLTADDNELTVNQLQATTHYWFEVCAWTRVGSGPPKTATIQSGVEPVLPHAPTTLA 1077
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE-HVIGKEVDRYTGRKEA 345
+ + S +Q+T G IT +K+ A+T N TWF + E E TG
Sbjct: 1078 LSNIEAFSVVLQFTPGFDGNSSITKWKVEAQTARNMTWFTICEISDPDAETLTVTG---- 1133
Query: 346 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 405
L+P++ Y ++ A N +G PS P+ + T KP AP + L +
Sbjct: 1134 -----LMPFTQYRLRLSATNVVGSSRPSDPTKDFQTIQAKPMHAPFNVTVRAMSALQLRV 1188
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE-----TLKEYGNVGIAVVRIPSEFYYTE 460
W PL + + Y + +R+ T S+ + E V+ E +T
Sbjct: 1189 RWIPLQQMEWFGNPRGYNVTYRQMERTGKPSKHPPRSVMIEDHTANSHVLEGLEE--WTL 1246
Query: 461 YEVKVQAINDVG 472
YEV + A NDVG
Sbjct: 1247 YEVIMNACNDVG 1258
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 110/287 (38%), Gaps = 39/287 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED--QDRYFIQDNVLTIRYLNPER-DPAMYQCR 67
C A G P TY W ++G+ P+ D +++ R+ + R D YQC
Sbjct: 99 CHALGYPQPTYRWLKDGK-------PVGDFSSSQFY--------RFHSTRREDAGSYQCI 143
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVWKK 125
AKN + +S V+ F+ T G+ IF P E+ P P +W+
Sbjct: 144 AKNDAGSIFSEKSDVVVAYMGIFENVTEGRLTVV--SGHPAIFDMPAIESVPTPSVLWQS 201
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH--GPSYY 183
+ + + L+I V +D Y A N E + L+ G Y
Sbjct: 202 ADGSLNYDIKYAFTQANQLIILSVDENDRKGYRARAINTQLGKEEISAFVHLNVSGDPYI 261
Query: 184 EQLPPKITIAAHR--------NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
E + P+I + L+L+C A+ L ++ IW +G+ + +
Sbjct: 262 E-VAPEIIVRPQDVKVKTGTGVLELQCIANARPLHELETIWLKDGLAVDTAGVRHTLNDP 320
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVG---KISTKTTVIVEGPP 279
N LL+ A+ + +GEY C V+ G +S V + PP
Sbjct: 321 WNRTLALLQ---ANSSHSGEYTCQVRLRSGGYPTVSASARVQILEPP 364
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 15/180 (8%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMY 64
D T +C A G P+ +W N ET +E R ++ L I + P D +Y
Sbjct: 475 DATISCRAIGSPNPNVTWIYN------ETQLVEISSRVQILESGDLLISNIRPS-DAGLY 527
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV-- 122
C N+ + A L VL ++ + P+ +T G T+ C + P +
Sbjct: 528 ICVRANEAGSVKGEALLSVL-VRTQIIQPPV--DTIVLLGLTATLQCKVSSDPSVPYNID 584
Query: 123 WKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W ++G + I + R + +G L I V D G YSC T+ G + RL V+ P
Sbjct: 585 WYREGQMAPISNSQRIGVQADGQLEIQAVRASDVGSYSCVVTSPGGNETRAARLSVIELP 644
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 79/204 (38%), Gaps = 25/204 (12%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
E PG P V +V + A I W I Y++ N ++ E
Sbjct: 1374 EDTPGSPSNVSFPDVTFSMARIIWDVPMDPNGEILAYQVTYTLNGSANLNYSREFPPSDR 1433
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
R TG L+P Y F V A LG+G+ +S D+P QAPS
Sbjct: 1434 TFRATG---------LMPERYYSFSVTAQTRLGWGKTASVLVYTTNNRDRP-QAPSGPQV 1483
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ------SETLKEYGNVGIAV 449
+I I++ P AP YY + R+ N+ +Q TL Y +G+
Sbjct: 1484 SRSQIQAHQITFNWTPGRDGFAPLRYYTVEMRE-NEGRWQPLPERVDPTLSSYTALGLRP 1542
Query: 450 VRIPSEFYYTEYEVKVQAINDVGP 473
YT Y+ ++QA ND+GP
Sbjct: 1543 --------YTTYQFRIQATNDLGP 1558
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147
P F P S + EG + C+ P+P + W KDG +G + +
Sbjct: 76 PRFTTHPSSSGSIVSEGSTKILQCHALGYPQPTYRWLKDGKPVGDFSSSQFYR-----FH 130
Query: 148 PVSRDDSGIYSCTATNVHG 166
R+D+G Y C A N G
Sbjct: 131 STRREDAGSYQCIAKNDAG 149
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 44/240 (18%)
Query: 269 TKTTVIVEGPPGLP----GGVQVVEVHKTSATIQW---------TDGATNGRPITHYKII 315
++ +++V P P GG++VV + TS +QW D AT G I + ++
Sbjct: 1562 SRESIVVRTLPAAPAVGVGGLKVVPITTTSVRVQWGALETGMWNGDAATGGYRILYQQL- 1620
Query: 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 375
+ F + K D + + + + L YE V+ N G G + P
Sbjct: 1621 -------SDFAPALQSTPK-TDVMGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPP 1672
Query: 376 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW--------- 426
+ Y A P P + ++ + W+P + QN + YKIF+
Sbjct: 1673 TAVYVGEA-VPTGEPRGVDATAISSTEVRLRWKPPKQSSQNGEILGYKIFYLVTWSPQAL 1731
Query: 427 ---RK-KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
RK + + E S T + V + +TEY +++ A N G GP S VT+
Sbjct: 1732 EPGRKFEEEIEVVSATATSHSLVFLD--------KFTEYRIQLLAFNPAGDGPRSAPVTV 1783
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 25/216 (11%)
Query: 279 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 336
P P G QV ++ T WT G P+ +Y + R N W + E V +
Sbjct: 1475 PQAPSGPQVSRSQIQAHQITFNWTPGRDGFAPLRYYTVEMREN-EGRWQPLPERV-DPTL 1532
Query: 337 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 396
YT L P++TY+F++ A N+LG PS+ S + P A +G G
Sbjct: 1533 SSYTALG-------LRPYTTYQFRIQATNDLG---PSAFSRESIVVRTLP--AAPAVGVG 1580
Query: 397 GGKI-----GDLSISWEPLPREKQN--APNIYYKIFWRKKND--TEFQSETLKEYGNVGI 447
G K+ + + W L N A Y+I +++ +D QS + +
Sbjct: 1581 GLKVVPITTTSVRVQWGALETGMWNGDAATGGYRILYQQLSDFAPALQSTPKTDVMGINE 1640
Query: 448 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
V + YE+ V N GPGP + ++
Sbjct: 1641 NSVVLSDLQQDRNYEIVVLPFNSQGPGPATPPTAVY 1676
>gi|195564479|ref|XP_002105682.1| GD16523 [Drosophila simulans]
gi|194203207|gb|EDX16783.1| GD16523 [Drosophila simulans]
Length = 2222
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 202/494 (40%), Gaps = 53/494 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRA 68
TC+ G P WFRN E +++ + RY + DN L I+ L + D AM+QC A
Sbjct: 379 TCDVVGEPTPQVKWFRNAESVDAHI----ESGRYTLNTDNTLVIKKLILD-DAAMFQCLA 433
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDG 127
N+ +S LRV T P + P A +G + TI C +P P W +
Sbjct: 434 INEAGENSASTWLRVKTSAPIMELPP--QNVTALDGKDATISCRAVGSPNPNITWIYNET 491
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
++ R +I E+G+LLIS + D+G+Y C N G + + L VL Q P
Sbjct: 492 QLVDISSRVQILESGDLLISNIRSVDAGLYICVRANEAGSVKGEAYLSVLVRTQII-QPP 550
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
T+ L+C ++ + W G + ++ + + DG L EI
Sbjct: 551 VDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQ--SSTPISNSQRIGVQADGQL-EIQA 607
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV---VEVHKTSATIQWTDGAT 304
+D G Y CVV S G + + V P P V+V E + S + WT G
Sbjct: 608 VRASDVGSYACVVTSPGGNETRAARLSVIELPFPPSNVKVERLPEPQQRSINVSWTPGFD 667
Query: 305 NGRPITHYKIIAR----------------TNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
PI+ + I R NW + NVS ++ +E
Sbjct: 668 GNSPISKFIIQRREVSELEKFVGPVPDPLLNWITELSNVS-----------ADQRWILLE 716
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
N L + Y+F+V A N +G G PS PS P + P P G + ++ W+
Sbjct: 717 N-LKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQ 775
Query: 409 PLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464
P E +N + Y++F +Q+ T +E N I + + +Y V+
Sbjct: 776 PPLEEHRNGQILGYILRYRLFGYNNVPWSYQNITNEEQRNFLIQEL-----ITWKDYIVQ 830
Query: 465 VQAINDVGPGPESE 478
+ A N++G G +E
Sbjct: 831 IAAYNNMGVGVYTE 844
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 10/193 (5%)
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 134
SA R+ L+P P+ +ET+ GG V + C+ P P+ W ++ + + G
Sbjct: 347 SASARLQILEPPLFFTPMRAETFGEFGGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESG 406
Query: 135 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 194
R + + L+I + DD+ ++ C A N G + + L V E P +T
Sbjct: 407 RYTLNTDNTLVIKKLILDDAAMFQCLAINEAGENSASTWLRVKTSAPIMELPPQNVTALD 466
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 254
++ + C A ++ +I+ L ++ + ++ G L I+N DAG
Sbjct: 467 GKDATISCRAVGSPNPNITWIYNET-------QLVDISSRVQILESGDLLISNIRSVDAG 519
Query: 255 EYECVVKSTVGKI 267
Y CV + G +
Sbjct: 520 LYICVRANEAGSV 532
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 19/259 (7%)
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----PGLPGG 284
+ L++ N+ D L + +E + VG KT I G P P
Sbjct: 1011 DTLKSFNLTADDTELTVNQLQATTHYWFEIFAWTRVGSGIPKTATIQSGVEPVLPHAPTA 1070
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE-HVIGKEVDRYTGRK 343
+ + + S +Q+T G IT +K+ +T N TWF + E + E TG
Sbjct: 1071 LALSNIEAFSVVLQFTPGFDGNSSITKWKVEGQTARNMTWFTICEINDPDAETLTVTG-- 1128
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
LVP++ Y ++ A N +G +PS + + T +P P + L
Sbjct: 1129 -------LVPFTQYRLRLSASNVVGSSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQL 1181
Query: 404 SISWEPLPREK----QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
+ W PL + + NI YK + ++ ++ + + V + S +T
Sbjct: 1182 RVRWIPLQQTEWYGNPRGYNISYKQLVKTPGTIKYVPRSVVIEDHTANSHV-LDSLEEWT 1240
Query: 460 EYEVKVQAINDVGPGPESE 478
YEVK+ A NDVG ES+
Sbjct: 1241 LYEVKMNACNDVGCSKESD 1259
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELL---NSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D T +C A G P+ +W N L +S LE D + N+ ++ D
Sbjct: 469 DATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGD--LLISNIRSV-------DAG 519
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
+Y C N+ + A L VL ++ + P+++ G T+ C + P +
Sbjct: 520 LYICVRANEAGSVKGEAYLSVL-VRTQIIQPPVDTTVLLGL--TATLQCKVSSDPSVPYN 576
Query: 122 -VWKKDGNI---IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W ++G I + R + +G L I V D G Y+C T+ G + RL V+
Sbjct: 577 IDWYREGQSSTPISNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRAARLSVI 636
Query: 178 HGP 180
P
Sbjct: 637 ELP 639
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 78/204 (38%), Gaps = 25/204 (12%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
E PG+P V +V T A I W I Y++ N S N S
Sbjct: 1369 EDTPGVPSNVSFPDVSLTMARIIWDVPVDPNGKILAYQVTYTLN-GSAMLNYSREF--PP 1425
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
DR E L+P Y F A LG+G+ ++ ++P QAPS
Sbjct: 1426 SDRTFRATE------LLPGKYYSFSCTAQTRLGWGKIATALVYTTNNRERP-QAPSVPQI 1478
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ------SETLKEYGNVGIAV 449
+I I++ P AP YY + R+ N+ +Q +L + VG+
Sbjct: 1479 SRSQIQAHQITFSWTPGRDGFAPLRYYTVEMRE-NEGRWQPLPERVDPSLSSFTAVGLRP 1537
Query: 450 VRIPSEFYYTEYEVKVQAINDVGP 473
Y Y+ ++QA ND+GP
Sbjct: 1538 --------YMTYQFRIQATNDLGP 1553
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 44/240 (18%)
Query: 269 TKTTVIVEGPPGLP----GGVQVVEVHKTSATIQWT---------DGATNGRPITHYKII 315
++ +VIV P P GG++VV + TS +QW+ D +T G I + ++
Sbjct: 1557 SRESVIVRTLPAAPAVGVGGLKVVPITTTSVRVQWSALETALWNGDASTGGYRILYQQL- 1615
Query: 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 375
+ F + K D + + + + + L YE V+ N G G + P
Sbjct: 1616 -------SDFPTALQSTPK-TDVHGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPP 1667
Query: 376 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW--------- 426
+ Y A P P + ++ + W+P + QN + YKI++
Sbjct: 1668 AAVYVGEA-VPTGEPRAVDAAPISSTEVRLLWKPPKQSMQNGDILGYKIYYLVTYSPQAL 1726
Query: 427 ---RK-KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
RK + + E S T + V + +TEY +++ A N G GP S +T+
Sbjct: 1727 EPGRKWEEEIEVVSATATSHSLVFLD--------KFTEYRIQLLAFNPAGDGPRSAPITV 1778
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 31/244 (12%)
Query: 256 YECVVKSTVG--KISTK---TTVIVEGP--PGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
+ C ++ +G KI+T TT E P P +P + ++ T WT G P
Sbjct: 1443 FSCTAQTRLGWGKIATALVYTTNNRERPQAPSVPQ-ISRSQIQAHQITFSWTPGRDGFAP 1501
Query: 309 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 368
+ +Y + R N W + E V + +T L P+ TY+F++ A N+LG
Sbjct: 1502 LRYYTVEMREN-EGRWQPLPERV-DPSLSSFTAVG-------LRPYMTYQFRIQATNDLG 1552
Query: 369 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI-----GDLSISWEPLPREKQN--APNIY 421
PS+ S + P A +G GG K+ + + W L N A
Sbjct: 1553 ---PSAFSRESVIVRTLP--AAPAVGVGGLKVVPITTTSVRVQWSALETALWNGDASTGG 1607
Query: 422 YKIFWRKKND--TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y+I +++ +D T QS + + V + YE+ V N GPGP +
Sbjct: 1608 YRILYQQLSDFPTALQSTPKTDVHGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPP 1667
Query: 480 VTIW 483
++
Sbjct: 1668 AAVY 1671
>gi|195347440|ref|XP_002040261.1| GM19085 [Drosophila sechellia]
gi|194121689|gb|EDW43732.1| GM19085 [Drosophila sechellia]
Length = 1249
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 200/492 (40%), Gaps = 49/492 (9%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRA 68
TC+ G P WFRN E +++ + RY + DN L I+ L + D AM+QC A
Sbjct: 381 TCDVVGEPTPQVKWFRNAESVDAHI----ESGRYTLNTDNTLVIKKLILD-DAAMFQCLA 435
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDG 127
N+ +S LRV T P + P A +G + TI C +P P W +
Sbjct: 436 INEAGENSASTWLRVKTSAPIMELPP--QNVTALDGKDATISCRAVGSPNPNITWIYNET 493
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
++ R +I E+G+LLIS + D+G+Y C N G + + L VL Q P
Sbjct: 494 QLVDISSRVQILESGDLLISNIRSVDAGLYICVRANEAGSVKGEAYLSVLVRTQII-QPP 552
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
T+ L+C ++ + W G + ++ + + DG L EI
Sbjct: 553 VDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQ--SSTPISNSQRIGVQADGQL-EIQA 609
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV---EVHKTSATIQWTDGAT 304
+D G Y CVV S G + + V P P V+V E + S + WT G
Sbjct: 610 VRASDVGSYACVVTSPGGNETRAARLSVIELPFPPSNVKVERLPEPQQRSINVSWTPGFD 669
Query: 305 NGRPITHYKIIAR----------------TNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
PI+ + I R NW + NVS ++ +E
Sbjct: 670 GNSPISKFIIQRREVSELEKFVGPVPDPLLNWITELSNVS-----------ADQRWILLE 718
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
N L + Y+F+V A N +G G PS PS P + P P G + ++ W+
Sbjct: 719 N-LKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQ 777
Query: 409 PLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
P E +N + Y + +R N+ + + + + + + +Y V++
Sbjct: 778 PPLEEHRNGQILGYILRYRLFGYNNVPWSYQNITNEAQRNFLIQEL---ITWKDYIVQIA 834
Query: 467 AINDVGPGPESE 478
A N++G G +E
Sbjct: 835 AYNNMGVGVYTE 846
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 10/193 (5%)
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 134
SA R+ L+P P+ +ET+ GG V + C+ P P+ W ++ + + G
Sbjct: 349 SASARLQILEPPLFFTPMRAETFGEFGGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESG 408
Query: 135 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 194
R + + L+I + DD+ ++ C A N G + + L V E P +T
Sbjct: 409 RYTLNTDNTLVIKKLILDDAAMFQCLAINEAGENSASTWLRVKTSAPIMELPPQNVTALD 468
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 254
++ + C A ++ +I+ L ++ + ++ G L I+N DAG
Sbjct: 469 GKDATISCRAVGSPNPNITWIYNET-------QLVDISSRVQILESGDLLISNIRSVDAG 521
Query: 255 EYECVVKSTVGKI 267
Y CV + G +
Sbjct: 522 LYICVRANEAGSV 534
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 142/383 (37%), Gaps = 50/383 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED--QDRYFIQDNVLTIRYLNPER-DPAMYQCR 67
C A G P TY W ++G +P+ D +++ R+ + R D YQC
Sbjct: 95 CHALGYPQPTYRWLKDG-------VPVGDFSSSQFY--------RFHSTRREDAGSYQCI 139
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVWKK 125
A+N + +S V+ F+ T G+ IF P E+ P P +W+
Sbjct: 140 ARNDAGSIFSEKSDVVVAYMGIFENTTEGRLTVV--SGHPAIFDMPPIESVPVPSVMWQS 197
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH-GMDESKGRLIVLHGPSYYE 184
+ + + L+I +D Y A N G +ES + + Y
Sbjct: 198 EDGPLNYDIKYAFTHANQLIILSADENDRKGYRAKAINTQLGKEESSAFVHLNVSGDPYI 257
Query: 185 QLPPKITIAAH--------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
++ P+I + ++L+C A+ L ++ +W +G+ + +
Sbjct: 258 EVAPEIIVRPQDVKVKVGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDPW 317
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVG---KISTKTTVIVEGPPGLPGGVQVVEVHKT 293
N LL+ A+ + +GEY C V+ G +S + + PP ++ +
Sbjct: 318 NRTLALLQ---ANSSHSGEYTCQVRLRSGGYPAVSASARLQILEPPLFFTPMRAETFGEF 374
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-EVDRYTGRKEAS-IENVL 351
+Q T G P K WF +E V E RYT + + + L
Sbjct: 375 GGQVQLTCDVV-GEPTPQVK----------WFRNAESVDAHIESGRYTLNTDNTLVIKKL 423
Query: 352 VPWSTYEFKVIAGNELGYGEPSS 374
+ F+ +A NE G S+
Sbjct: 424 ILDDAAMFQCLAINEAGENSAST 446
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 71/184 (38%), Gaps = 14/184 (7%)
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----PGLPGG 284
+ L++ N+ D L + +E + VG KT I G P P
Sbjct: 1013 DTLKSFNLTADDTELTVNQLQATTHYWFEIFAWTRVGSGIPKTATIQSGVEPVLPHAPTA 1072
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE-HVIGKEVDRYTGRK 343
+ + + S +Q+T G IT +K+ +T N TWF + E + E TG
Sbjct: 1073 LALSNIEAFSVVLQFTPGFDGNSSITKWKVEGQTARNMTWFTICEINDPDAETLTVTG-- 1130
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
LVP++ Y ++ A N +G +PS + + T +P P + L
Sbjct: 1131 -------LVPFTQYRLRLSASNVVGSSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQL 1183
Query: 404 SISW 407
+ W
Sbjct: 1184 RVRW 1187
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELL---NSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D T +C A G P+ +W N L +S LE D + N+ ++ D
Sbjct: 471 DATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGD--LLISNIRSV-------DAG 521
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV 122
+Y C N+ + A L VL ++ + P+++ G T+ C + P +
Sbjct: 522 LYICVRANEAGSVKGEAYLSVL-VRTQIIQPPVDTTVLLGL--TATLQCKVSSDPSVPYN 578
Query: 123 --WKKDGNI---IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W ++G I + R + +G L I V D G Y+C T+ G + RL V+
Sbjct: 579 IDWYREGQSSTPISNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRAARLSVI 638
Query: 178 HGP 180
P
Sbjct: 639 ELP 641
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 22/118 (18%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147
P F P S + EG + C+ P+P + W KDG +G + +
Sbjct: 72 PRFTTHPSSSGSIVSEGSTKILQCHALGYPQPTYRWLKDGVPVGDFSSSQFYR-----FH 126
Query: 148 PVSRDDSGIYSCTATNVHGM-----------------DESKGRLIVLHGPSYYEQLPP 188
R+D+G Y C A N G + ++GRL V+ G +PP
Sbjct: 127 STRREDAGSYQCIARNDAGSIFSEKSDVVVAYMGIFENTTEGRLTVVSGHPAIFDMPP 184
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,109,265,734
Number of Sequences: 23463169
Number of extensions: 428402484
Number of successful extensions: 970093
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3625
Number of HSP's successfully gapped in prelim test: 11965
Number of HSP's that attempted gapping in prelim test: 798858
Number of HSP's gapped (non-prelim): 94954
length of query: 505
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 358
effective length of database: 8,910,109,524
effective search space: 3189819209592
effective search space used: 3189819209592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)