BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14886
(505 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VN14|CONT_DROME Contactin OS=Drosophila melanogaster GN=Cont PE=1 SV=2
Length = 1390
Score = 540 bits (1392), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 343/481 (71%), Gaps = 7/481 (1%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +D+T+ CEAF +PD Y+W++N E L+ + ++DRY IQDNVLTI++L ++D
Sbjct: 673 DYNSDVTFICEAFAIPDANYTWYKNAERLDPANI---NRDRYIIQDNVLTIKFLEKDKDD 729
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
AMYQC A+NQLKT +SSAQLRVL++KPSFKK PLESE YA GN TI C+PEAAP+PKF
Sbjct: 730 AMYQCGAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCDPEAAPRPKF 789
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
WKKDG +IGSGG R+I +G L ISP SRDD GIY+C A+N G DES R+IVL
Sbjct: 790 QWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTCIASNQAGTDESHARVIVLQEIR 849
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E P +I H + L C A +ELLD+AY+W HNG + N N T I +D
Sbjct: 850 FIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHNGEVLKN---NHDGTGRIIVDWN 906
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
L + N S DAG+YECVVKS V +IS+KT+V +EG PG PGGVQV+++ KT A I+W D
Sbjct: 907 RLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAPGAPGGVQVIQISKTKAIIEWVD 966
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G+ NGR I +Y I+ RTNWN TW NVS HV +EVDRYT R++A + N L PWS YEF V
Sbjct: 967 GSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRYTSRQQAEVVN-LTPWSAYEFSV 1025
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+LG G PS+PSP Y+T DKPY AP +GGGGGKIGDL+I+W+PL ++Q++ I+
Sbjct: 1026 TAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHGIH 1085
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
YK+FW+ K E+ S+ +K+ ++G+AVV IP YYTEYEVKVQAIN VG GPESE+
Sbjct: 1086 YKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAV 1145
Query: 482 I 482
I
Sbjct: 1146 I 1146
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 39/277 (14%)
Query: 6 DLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D+T +C A G P +Y+W+R + L + + QDRY I L I D
Sbjct: 383 DVTLSCLANGYPTPSYTWYREVYVDDRLEYQKIDPLAQDRYTISGGNLIIYEPKQALDQG 442
Query: 63 MYQCRAKNQL-KTRYSSAQLRV-LTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKP 119
Y C A+N+ + R SA L ++ + K+ SE G+ +IFC+ P+ P
Sbjct: 443 AYHCVAENKFGRIRSESAHLNFGFIMEFNLKRSAETSEMNWGK----SIFCDPPQHYPDV 498
Query: 120 KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR---- 173
++ W +D N + R + +G L S + D YSCT V + GR
Sbjct: 499 RYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---VQTLVSDTGRNGPF 555
Query: 174 --LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
L V +Y + ++ P+ +A ++L C A + +Y WT G+ +
Sbjct: 556 FPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI--PSYNWTRQGLPL 612
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 260
+ IN G +L I NA+ D GEY C +
Sbjct: 613 ------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 642
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1122 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
Query: 414 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233
Query: 467 AINDVGPGPESE 478
A N G GPESE
Sbjct: 1234 AYNAAGEGPESE 1245
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 19/222 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
PDV Y W R+ EDQ + +D L ++ D A Y C + +
Sbjct: 496 PDVRYYWARDY----FPNFVEEDQRVFVSRDGALYFSFIE-TVDRANYSCTVQTLVSDTG 550
Query: 77 SSAQLRVLTLKPSFKKRPL-ESETYAG-------EGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ L + P+ + L + T+ G + + C P P + W + G
Sbjct: 551 RNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDEIRLECMAFGYPIPSYNWTRQGL 610
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ I L+I + +D+G YSCT TN + + P + +P
Sbjct: 611 PLQRNAY-TINYGRVLIIQNATTNDNGEYSCTITNPRKTLMKSIYINIQMRPQF--TIPL 667
Query: 189 KITIAAHR-NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
K I + ++ C A + D Y W N R+ ++N
Sbjct: 668 KDMIKDYNSDVTFICEAFA--IPDANYTWYKNAERLDPANIN 707
>sp|Q8IWV2|CNTN4_HUMAN Contactin-4 OS=Homo sapiens GN=CNTN4 PE=1 SV=1
Length = 1026
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 240/481 (49%), Gaps = 16/481 (3%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ W C+A G P TY W +NGE PL +DR I+ L I +N D M
Sbjct: 330 EENVFWECKANGRPKPTYKWLKNGE-------PLLTRDRIQIEQGTLNITIVNLS-DAGM 381
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
YQC A+N+ +S+A+L V+ + P F + L+ T GG V I C P+A+PKP + W
Sbjct: 382 YQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTW 441
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
KK +I+ R I E+GNL I V++ D+G Y+C ATN G S G L+V P+
Sbjct: 442 KKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTRV 500
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 242
P + + ++ L C + LD+ + W+ NG I + D + E G
Sbjct: 501 MVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGD 560
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G
Sbjct: 561 LMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPG 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PIT Y I ART ++ W VS + + +D G+ + L PW YEF+ +
Sbjct: 621 PDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPWVEYEFRTV 675
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y
Sbjct: 676 AANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGY 735
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R + L + V R S ++ +EVKV N+ G GP S +
Sbjct: 736 VVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVV 794
Query: 483 W 483
+
Sbjct: 795 Y 795
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 102 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 161 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 353
Query: 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 121/317 (38%), Gaps = 32/317 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P W NG +++ RY + + L I N +D YQC A N
Sbjct: 50 CEVKGNPKPHIRWKLNGTDVDTGM-----DFRYSVVEGSLLINNPNKTQDAGTYQCTATN 104
Query: 71 QLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGN 128
T S A+L+ L +FK R S G + + C P + + + W +
Sbjct: 105 SFGTIVSREAKLQFAYLD-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEY 162
Query: 129 IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVL------- 177
RR + E GNL I+ V + D G Y+C TN H + LI+
Sbjct: 163 PSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 222
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNI 236
+ P Q P + A ++L C A + + IW +G I
Sbjct: 223 YEPKIEVQFPETVPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR------- 273
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
+ G+LEI N DAG YECV +++ GK + + P + + V
Sbjct: 274 HKSNGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEEN 332
Query: 297 IQWTDGATNGRPITHYK 313
+ W + NGRP YK
Sbjct: 333 VFW-ECKANGRPKPTYK 348
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFE 140
+ +PS PL+SE V + C + PKP WK +G + +G R + E
Sbjct: 27 IFIQEPSPVMFPLDSEE-----KKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y CTATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCTATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 171/490 (34%), Gaps = 42/490 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + ++L ++ +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPKPVYTWKKGRDIL-------KENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N T S+ L V+ P + GE + + + F W +G++
Sbjct: 481 NHFGTASSTGNL-VVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHL 539
Query: 130 IGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I FE G+L+I + +G Y C + LIV P
Sbjct: 540 IDFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGP 599
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + L R + + I +G ++ + P + IDG
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-IDGKT 656
Query: 243 LEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
T EYE V + +G + S K P P V K+
Sbjct: 657 FTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSEL 716
Query: 296 TIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I W + NGR Y + R W + + RY R E+ +
Sbjct: 717 VITWETVPEELQNGRGF-GYVVAFRPYGKMIWMLTV--LASADASRYVFRNES-----VH 768
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W P
Sbjct: 769 PFSPFEVKVGVFNNKGEG-PFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWAS-PL 826
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
EK Y++ + + D E + ++ GN +I + Y + V+A N G
Sbjct: 827 EKNRGRIQGYEVKYWRHEDKEENARKIRTVGNQ--TSTKITNLKGSVLYHLAVKAYNSAG 884
Query: 473 PGPESEVVTI 482
GP S V +
Sbjct: 885 TGPSSATVNV 894
>sp|Q90W79|CNTN5_CHICK Contactin-5 OS=Gallus gallus GN=CNTN5 PE=1 SV=1
Length = 1027
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 237/483 (49%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C+A G P TY W +NG +PL Q R + ++VL IR +N D
Sbjct: 328 LDSGEQLRWECKATGKPRPTYRWLKNG-------VPLWPQSRIEMINSVLMIRTVNIS-D 379
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ T Y+SA+L++L P+F + +G V I C P+A+PKP
Sbjct: 380 AGMYQCLAENKYGTIYASAELKILASAPTFPLNQMRKTIIITKGQEVVIECKPQASPKPT 439
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I G+L I S+ D G YSC NV G E + V P
Sbjct: 440 ITWKKGDKALRESKRVTILPQGSLRILNASKSDEGRYSCRGVNVFGSAEIVASVSVKE-P 498
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P KI + ++ L C A + LDV + WT NG I + + E+
Sbjct: 499 TRIELTPKKIELTVGESIVLSCKALHDSTLDVTFYWTLNGQPIDFDKEDGHFESIKAQAS 558
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++ +S +T ++V GPPG PG V V E+ T+AT+ W
Sbjct: 559 SADLMIRNILLMHAGRYGCRVQTAADAVSDETELLVRGPPGPPGVVIVEEITDTTATLSW 618
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ GA N PI+ Y + AR+ ++ W + D +G E+++ L PW YEF
Sbjct: 619 SPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPDVISGDMESAMAVELNPWVEYEF 673
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N++G G+PS+PS T P P+ + G G+ +L I+WEP+ E QN
Sbjct: 674 RVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEG 733
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S +
Sbjct: 734 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSPI 792
Query: 480 VTI 482
V I
Sbjct: 793 VVI 795
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 108/279 (38%), Gaps = 33/279 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C+A G P TY W RNG ++ +E RY + + L I N +D
Sbjct: 43 EKKVSLNCQAHGSPTPTYRWLRNGTEID-----VESDYRYSLIEGSLIISNPNEMKDSGQ 97
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFV 122
YQC N + S + +F R S EG V + C+P +P+ +
Sbjct: 98 YQCLTTNMFGSILSREAVLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPLHSPEIIYS 156
Query: 123 W--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
W + + + RR I E GNL IS V D G Y C T TN + +
Sbjct: 157 WVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNGVRIGNMD 227
G P P +T A +++ C A + +++ + HN +
Sbjct: 217 RNDGVMGEYEPKIEVHFPYTVTAARGTTVKMECFALGNPVPTISWKKVNGHNPSKA---- 272
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ +LEI N DAG YEC +++ G+
Sbjct: 273 -------RLRKSQAVLEIPNVQLEDAGMYECKAENSRGR 304
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 102/276 (36%), Gaps = 26/276 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 151 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 206
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKK-DG 127
+ LTL+ E + A G V + C P P WKK +G
Sbjct: 207 VLSPPTPLTLRNDGVMGEYEPKIEVHFPYTVTAARGTTVKMECFALGNPVPTISWKKVNG 266
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
+ RK L I V +D+G+Y C A N G + +G+L V P + E+L
Sbjct: 267 HNPSKARLRK--SQAVLEIPNVQLEDAGMYECKAENSRGRNVFRGQLQVYTYPQWVEKL- 323
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + L+ C A + Y W NGV + I + +L I
Sbjct: 324 NDTELDSGEQLRWECKATGKP--RPTYRWLKNGVPLWPQS-------RIEMINSVLMIRT 374
Query: 248 ASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 282
+ +DAG Y+C+ ++ G I + I+ P P
Sbjct: 375 VNISDAGMYQCLAENKYGTIYASAELKILASAPTFP 410
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 160
E V++ C +P P + W ++G I S R + E ++ +P DSG Y C
Sbjct: 42 EEKKVSLNCQAHGSPTPTYRWLRNGTEIDVESDYRYSLIEGSLIISNPNEMKDSGQYQCL 101
Query: 161 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 217
TN+ G S+ ++ + ++ + +++ + + L CS H+ E++ Y W
Sbjct: 102 TTNMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEII---YSWV 158
Query: 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
N + E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 159 FNEF---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 202
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD---LSISWEPLPRE 413
Y V A N GYG PS+ + + T P QAPS + I D +S+ WEP+
Sbjct: 873 YHLTVRAYNAAGYGPPST-AVRVATKKSPPSQAPSNVMW----IQDGSHVSLGWEPVRPL 927
Query: 414 KQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ + YK+ R++ + Q ET K AVV +P Y ++V A+++ G
Sbjct: 928 ANESEVMGYKVLLRQEGQSNSQVIETQKTS-----AVVILPDVGVYI---IEVCAVSEGG 979
Query: 473 PGPESEVVTI 482
G S + +
Sbjct: 980 DGTASPQIRV 989
>sp|Q69Z26|CNTN4_MOUSE Contactin-4 OS=Mus musculus GN=Cntn4 PE=2 SV=2
Length = 1026
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 231/476 (48%), Gaps = 16/476 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL +DR I+ L I +N D MYQC A
Sbjct: 335 WECKANGRPKPTYRWLKNGD-------PLLTRDRIQIEQGTLNITIVNLS-DAGMYQCVA 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ +SSA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 387 ENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +IV P+ P
Sbjct: 447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVIV-KDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W + D G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGW-----QAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 741 PHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVY 795
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 278 P 278
P
Sbjct: 406 P 406
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 34/319 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + D L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKINGTDVD-----IGMDFRYSVVDGSLLINNPNKTQDAGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYE 184
RR + E GNL I+ V + D G Y+C TN + G ++L
Sbjct: 162 YPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMG 221
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I
Sbjct: 222 EYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR------ 273
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTS 294
+ G+LEI N DAG YECV +++ GK K + P VQ++ ++H
Sbjct: 274 -HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAM 329
Query: 295 ATIQWTDGATNGRPITHYK 313
+ + NGRP Y+
Sbjct: 330 EESVFWECKANGRPKPTYR 348
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 38/209 (18%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + +
Sbjct: 27 VFVQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVD 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P D+G Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASF 250
L C H+ EL +Y W N E P+ ++ + G L I
Sbjct: 142 LLCGPPPHSGEL---SYAWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEK 186
Query: 251 ADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+D G Y CVV +TV T V GPP
Sbjct: 187 SDVGNYTCVVTNTV------TNHKVLGPP 209
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 173/491 (35%), Gaps = 44/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + E+L + +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPRPVYTWRKGREIL-------RENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N T S+ V+ P+ P S + GE + + + F W +G+
Sbjct: 481 NHFGTASSTGN--VIVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGH 538
Query: 129 IIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+I FE G+L+I + +G Y C LIV P
Sbjct: 539 LIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPG 598
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L R + + I +G +N + P++ +DG
Sbjct: 599 PPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTV--PDL-VDGK 655
Query: 242 LLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
T EYE V + +G + S K P P V K+
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 295 ATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
I W + NGR Y + R + W + + RY R E+ +
Sbjct: 716 LVITWETVPEELQNGRGF-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----V 767
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W
Sbjct: 768 RPFSPFEVKVGVFNNKGEG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPI 826
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ + Y +WR +D E ++ ++ GN +I + Y + V+A N
Sbjct: 827 GKNRGRIQGYEVKYWRH-DDKEENAKKIRTVGNQ--TSTKITNLKGSALYHLSVKAYNSA 883
Query: 472 GPGPESEVVTI 482
G GP S V +
Sbjct: 884 GTGPSSATVNV 894
>sp|Q62845|CNTN4_RAT Contactin-4 OS=Rattus norvegicus GN=Cntn4 PE=1 SV=1
Length = 1026
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 235/476 (49%), Gaps = 16/476 (3%)
Query: 9 WTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
W C+A G P TY W +NG+ PL ++R I+ L I +N D MYQC A
Sbjct: 335 WECKANGRPKPTYRWLKNGD-------PLLTRERIQIEQGTLNITIVNLS-DAGMYQCVA 386
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+N+ Y+SA+L V+ P F + L+ T GG V I C P+A+P+P + W+K
Sbjct: 387 ENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I+ R I E+GNL I V++ D+G Y+C ATN G S G +V+ P+ P
Sbjct: 447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGN-VVVKDPTKVMVPPS 505
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITN 247
+ + ++ L C + LD+ + WT NG I + D + E G L I N
Sbjct: 506 SMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLIDFDKDGDHFERVGGQDSAGDLMIRN 565
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 307
AG+Y C+V+++V K+S +IV GPPG P V + E+ T+A + W G N
Sbjct: 566 IQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHS 625
Query: 308 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 367
PIT Y I ART ++ W VS + + VD G+ + L PW YEF+ +A N +
Sbjct: 626 PITMYVIQARTPFSVGWQAVS--TVPELVD---GKTFTATVVGLNPWVEYEFRTVAANVI 680
Query: 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 427
G GEPS PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 681 GIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR 740
Query: 428 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ L + V R S ++ +EVKV N+ G GP S ++
Sbjct: 741 PHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVY 795
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 129/319 (40%), Gaps = 34/319 (10%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
+CE G P W NG ++ + RY + + L I N +D YQC A
Sbjct: 49 SCEVKGNPKPHIRWKLNGTDVD-----IGMDFRYSVVEGSLLINNPNKTQDSGTYQCIAT 103
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDG 127
N T S A+L+ L+ +FK R S G + + C P + + + W +
Sbjct: 104 NSFGTIVSREAKLQFAYLE-NFKTR-TRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNE 161
Query: 128 NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYE 184
+ RR + E GNL I+ V + D G Y+C TN + G ++L
Sbjct: 162 HPSYQDNRRFVSQETGNLYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMG 221
Query: 185 QLPPKI------TIAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPN 235
+ PKI T+ A + ++L C A + + +W +G I +
Sbjct: 222 EYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTI--LWRRADGKPIARKARRHKSS-- 277
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTS 294
G+LEI N DAG YECV +++ GK K V P VQ++ ++H
Sbjct: 278 -----GILEIPNFQQEDAGSYECVAENSRGKNIAKGQVTFYAQPNW---VQIINDIHVAM 329
Query: 295 ATIQWTDGATNGRPITHYK 313
+ + NGRP Y+
Sbjct: 330 EESVFWECKANGRPKPTYR 348
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 84/202 (41%), Gaps = 24/202 (11%)
Query: 83 VLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFE 140
V +PS PL+SE V + C + PKP WK +G IG R + E
Sbjct: 27 VFVQEPSHVMFPLDSEE-----KKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVE 81
Query: 141 NGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
L+ +P DSG Y C ATN G S+ +L + ++ + +++ + +
Sbjct: 82 GSLLINNPNKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMV 141
Query: 200 LRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257
L C H+ E L A+I+ + N ET N L I AD G Y
Sbjct: 142 LLCGPPPHSGE-LSYAWIFNEHPSYQDNRRFVSQETGN-------LYIAKVEKADVGNYT 193
Query: 258 CVVKSTVGKISTKTTVIVEGPP 279
CVV +TV T+ V GPP
Sbjct: 194 CVVTNTV------TSHQVLGPP 209
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 172/491 (35%), Gaps = 44/491 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAK 69
C+ P Y+W + E+L + +R I ++ +R +N + D Y C A
Sbjct: 429 CKPKASPRPVYTWRKGREIL-------RENERITISEDG-NLRIINVTKSDAGSYTCIAT 480
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
N T S+ V+ P+ P S + GE + + + F W +G+
Sbjct: 481 NHFGTASSTGN--VVVKDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGH 538
Query: 129 IIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+I FE G+L+I + +G Y C + LIV P
Sbjct: 539 LIDFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPG 598
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L R + + I +G ++ + P + +DG
Sbjct: 599 PPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTV--PEL-VDGK 655
Query: 242 LLEITNASFADAGEYE--CVVKSTVG-----KISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
T EYE V + +G + S K P P V K+
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 295 ATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351
I W + NGR Y + R + W + + RY R E+ +
Sbjct: 716 LVITWETVPEELQNGRGF-GYVVAFRPHGKMIWMLTV--LASADASRYVFRNES-----V 767
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+S +E KV N G G P SP+ + ++P + P+ I D+ + W
Sbjct: 768 RPFSPFEVKVGVFNNKGEG-PFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFWASPI 826
Query: 412 REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 471
+ + Y +WR +D E + ++ GN +I + Y + V+A N
Sbjct: 827 GKNRGRIQGYEVKYWRH-DDKEENARKIRTVGNQ--TSTKITNLKGNALYHLSVKAYNSA 883
Query: 472 GPGPESEVVTI 482
G GP S V +
Sbjct: 884 GTGPSSAAVNV 894
>sp|P97528|CNTN6_RAT Contactin-6 OS=Rattus norvegicus GN=Cntn6 PE=1 SV=1
Length = 1028
Score = 254 bits (650), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ +Y+W +NGE LN+E +R ++ L I LN D +YQ
Sbjct: 334 SLFWECKASGNPNPSYTWLKNGERLNTE-------ERIQTENGTLIITMLNVS-DSGIYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRVL P F K P++ + GG+++I C P A PK WK+
Sbjct: 386 CAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R E+G+L I V+R D+G Y+C ATN G +S G LIV +
Sbjct: 446 GTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGQTYNATVIGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WEP+P E QN Y
Sbjct: 677 AGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVITWEPIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + + R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWMKEKVALVESSKF-IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVSIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 187/505 (37%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + +F++D L I + D Y
Sbjct: 425 GDISIECKPNAFPKASISWKRGTENLK------QSKRVFFLEDGSLKICNVT-RSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ SS L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCVATNQFGNGKSSGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPTM 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 530 EVLFVWYFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V + +G + TK ++ P
Sbjct: 650 --PEI-LNGQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW + E V E
Sbjct: 707 INGGGG----SRSELVITWEPIPEELQNGEGF-GYIIMFRPVGSTTW--MKEKVALVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++ R E+ ++P S +E KV N G G S+ S Y+ D+P AP
Sbjct: 760 KFIYRNES-----IMPLSPFEVKVGVYNNEGEGSLSTVSIVYSG-EDEPRLAPRGTSVQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
D+ +SW + + + Y++ + N E ++ GNV I
Sbjct: 814 FSASDMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 108/295 (36%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ +C A G P Y W +NG ++ Y + L I ++D
Sbjct: 42 SRSEIILSCTASGYPSPHYRWKQNGTDID-----FSMTYHYRLDGGSLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
+YQC A N + T S F+ + S EG V + C P P F
Sbjct: 97 IYQCLATNPVGTILSRKAKLQFAYIEDFETKS-RSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + +N GNL I+ V D G Y+C TN +G
Sbjct: 152 ELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPMPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ + + LEI D G YECV + G+ K +I PP
Sbjct: 272 KVKYSNSQ--------ATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLIFYAPP 318
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 28/256 (10%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
+++Y W N L +++ R F+ N L I + P D Y C N+ R
Sbjct: 152 ELSYDW-----TFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPS-DVGNYTCFVTNKEAHR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
G + L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 265 DGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECVAGNLRGRNLAKGQLI-FYAPPEWEQK 323
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ + +L C A + +Y W NG R+ + I + G L IT
Sbjct: 324 IQNTYLSIYDSLFWECKASGNP--NPSYTWLKNGERLNTEE-------RIQTENGTLIIT 374
Query: 247 NASFADAGEYECVVKS 262
+ +D+G Y+C ++
Sbjct: 375 MLNVSDSGIYQCAAEN 390
>sp|Q9UQ52|CNTN6_HUMAN Contactin-6 OS=Homo sapiens GN=CNTN6 PE=1 SV=1
Length = 1028
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+L W C+A G P+ Y+W +NGE LN E +R I++ L I LN D +YQ
Sbjct: 334 NLLWECKASGKPNPWYTWLKNGERLNPE-------ERIQIENGTLIITMLNVS-DSGVYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ + Y++A+LRVL P F K P++ +++ GG++ I C P A P+ WK+
Sbjct: 386 CAAENKYQIIYANAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + E+G+L I ++R D+G Y+C ATN G ++ G LIV +
Sbjct: 446 GTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVKER-TVITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ +S +IV GPPG P VQV ++ T++ + W G
Sbjct: 562 LMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPGPPEDVQVEDISSTTSQLSWRAG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGKTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
I +R T + E + + V R S + +EVKV N+ G G S V +
Sbjct: 737 IIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ C A G P Y W +NG ++ Y + L I + ++D
Sbjct: 42 SKSEVILNCAANGYPSPHYRWKQNGTDID-----FTMSYHYRLDGGSLAINSPHTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
MYQC A N L T S F+ + S EG V + C P P F
Sbjct: 97 MYQCLATNLLGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLC----GPPPHFG 151
Query: 122 ----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
W + N + RR + E GNL I+ V D G Y+C TN +G
Sbjct: 152 DLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRSVQGPP 211
Query: 175 IVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
L + P + P I A +++L C A + D+++ G
Sbjct: 212 TPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGSPLPG 271
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ ++ + +LEI N D G YEC+ + G+ K +I PP
Sbjct: 272 KVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLRGRNLAKGQLIFYAPP 318
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 186/505 (36%), Gaps = 60/505 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D+ C+ P SW R E L + + + ++D L I Y D Y
Sbjct: 425 GDIVIGCKPNAFPRAAISWKRGTETLR------QSKRIFLLEDGSLKI-YNITRSDAGSY 477
Query: 65 QCRAKNQLKTRYSSAQL-----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
C A NQ T ++ L V+T+ PS + + GE ++ + C P
Sbjct: 478 TCIATNQFGTAKNTGSLIVKERTVITVPPS------KMDVTVGE--SIVLPCQVSHDPSI 529
Query: 120 K--FVWKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171
+ FVW +G++I FE G+L+I + SG Y CT +
Sbjct: 530 EVVFVWFFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAV 589
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+IV P E + + + L R + + I T +G + +
Sbjct: 590 ADIIVRGPPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATV 649
Query: 232 ETPNINIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPG 280
P I ++G T + EYE V +++G + TK +V V P
Sbjct: 650 --PEI-LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVN 706
Query: 281 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 337
+ GG ++ I W + NG Y I+ R ++TW E V E
Sbjct: 707 IHGGGG----SRSELVITWESIPEELQNGEGF-GYIIMFRPVGSTTW--SKEKVSSVESS 759
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
R+ R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 760 RFVYRNES-----IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSLQS 813
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
++ +SW + + + Y++ + + E ++ GNV I
Sbjct: 814 FSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNV--TTKNITGLKA 871
Query: 458 YTEYEVKVQAINDVGPGPESEVVTI 482
T Y V+A N G GP S V +
Sbjct: 872 NTIYFASVRAYNTAGTGPSSPPVNV 896
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQLKTR 75
D++Y+W N L +++ +R F+ L I + P D Y C N+ R
Sbjct: 152 DLSYAW-----TFNDNPLYVQEDNRRFVSQETGNLYIAKVEPS-DVGNYTCFITNKEAQR 205
Query: 76 YSSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK- 125
L + P + R E+ A + +V + C P P W++
Sbjct: 206 SVQGPPTPLVQRTDGVMGEYEPKIEVRFPET-IQAAKDSSVKLECFALGNPVPDISWRRL 264
Query: 126 DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
DG+ + G+ K ++ +L P ++D G Y C A+N+ G + +KG+LI + P +E
Sbjct: 265 DGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYECIASNLRGRNLAKGQLI-FYAPPEWE 321
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q ++ + NL C A + + Y W NG R LN E I I+ G L
Sbjct: 322 QKIQNTHLSIYDNLLWECKASGKP--NPWYTWLKNGER-----LNPEE--RIQIENGTLI 372
Query: 245 ITNASFADAGEYECVVKS 262
IT + +D+G Y+C ++
Sbjct: 373 ITMLNVSDSGVYQCAAEN 390
>sp|Q62682|CNTN3_RAT Contactin-3 OS=Rattus norvegicus GN=Cntn3 PE=1 SV=1
Length = 1028
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/496 (33%), Positives = 246/496 (49%), Gaps = 20/496 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L E +R I++ LTI LN D M+QC
Sbjct: 335 LYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENGALTIANLNVS-DSGMFQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+L+VL P F + P++ G V + C P A+P+ WKK
Sbjct: 387 IAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRALSFWKKG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R + +G L I V++ D+GIY+C A N G +L+V P+
Sbjct: 447 DTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTE-PTRIILA 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + +A ++ L C + LLD+ + W NG D + E + G L+ I
Sbjct: 506 PSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGSSSGDLM-I 564
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + WT+G +
Sbjct: 565 RNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDS 624
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+ Y + ART ++ W NV + + +D T R +E L PW YEF+V+A N
Sbjct: 625 HSPVISYAVQARTPFSVGWQNV--RTVPEAIDGKT-RTATVVE--LNPWVEYEFRVVASN 679
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y +
Sbjct: 680 KIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVA 739
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW-- 483
+R T + + N V R S ++ YEVKV N+ G GP S V T++
Sbjct: 740 FRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSA 798
Query: 484 -HDPLVIISYVCQGDL 498
+P V S++ L
Sbjct: 799 EEEPTVAPSHISAHSL 814
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSL-----DHRYKLNGGNLIV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK R + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKSR-MRSRVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+V+ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R M
Sbjct: 217 RSDGVMGEYEPKIELQFPETLPAAKGSTVKLECFALGNPVPQI------NWRRSDGMPFP 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+++ N G+LEI N D G YEC+ +++ GK
Sbjct: 271 TKIKLRKFN---GVLEIPNFQQEDTGSYECIAENSRGK 305
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIKLRKF-NGVLEIPNFQQEDTGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P Y+ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWVQLLKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G D LE I I+ G L I N + +D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 174/478 (36%), Gaps = 60/478 (12%)
Query: 33 ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKK 92
+T+ E + D L I + + D +Y C A+NQ + QL V+T
Sbjct: 447 DTVVREQARISLLNDGGLKIMNVT-KADAGIYTCIAENQFGKANGTTQL-VVTEPTRIIL 504
Query: 93 RPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFE------NGNL 144
P + GE ++ + C + P F W +G + FE +G+L
Sbjct: 505 APSNMDVAVGE--SIILPCQVQHDPLLDIMFAWYFNGTLTDFKKDGSHFEKVGGSSSGDL 562
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
+I + SG Y C S LIV P E + K+ QL +
Sbjct: 563 MIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDEITDTTAQLSWTE 620
Query: 205 HTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE--CVV 260
T+ V + +G ++ + IDG T EYE V
Sbjct: 621 GTDSHSPVISYAVQARTPFSVGWQNVRTVPEA---IDGKTRTATVVELNPWVEYEFRVVA 677
Query: 261 KSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW-------TDGAT 304
+ +G K+ T+ P + GG ++ I W +G
Sbjct: 678 SNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGG----SRSELVITWDPVPEELQNGGG 733
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
G + ++ + T W + V + RY R E+ +VP+S YE KV
Sbjct: 734 FGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IVPFSPYEVKVGVY 781
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N G G P SP + ++P APS I ++ +SW +P + N + Y++
Sbjct: 782 NNKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSNGRLLGYEV 840
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAINDVGPGPESEVV 480
+ E S +K GN AV+R + S YYT V+A N G GP S V
Sbjct: 841 RYWNNGGEEESSSKVKVAGNQTSAVLRGLKSNLAYYT----AVRAYNTAGAGPFSATV 894
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I + R
Sbjct: 21 LLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ ++++ + +
Sbjct: 81 GGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWVFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>sp|Q9JMB8|CNTN6_MOUSE Contactin-6 OS=Mus musculus GN=Cntn6 PE=2 SV=2
Length = 1028
Score = 251 bits (642), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 238/481 (49%), Gaps = 21/481 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C+A G P+ +Y+W +NG+ LN+E +R I++ L I LN D +YQ
Sbjct: 334 SLFWECKASGNPNPSYTWLKNGQRLNTE-------ERIQIENGTLIITMLNIS-DSGIYQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ +T Y++A+LRVL P F K P++ + GG+++I C P A PK WK+
Sbjct: 386 CAAENKYQTIYANAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKR 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R E+G+L I V+R D+G Y+C ATN G +S G L+V +
Sbjct: 446 GTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKER-TIITV 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GL 242
P K+ + ++ L C + ++V ++W NG I DL + I G G
Sbjct: 505 PPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII---DLKKGVAHFERIGGESVGD 561
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 302
L I N +G+Y C V++T+ ++S +IV GPPG P V+V + T++ + W G
Sbjct: 562 LMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPEDVKVEHISSTTSQLSWRPG 621
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
N PI + I RT ++ W + + G+ + L PW YEF+V+
Sbjct: 622 PDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILNGQTYNATVVGLSPWVEYEFRVV 676
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
AGN +G GEPS PS T A P AP I GGGG +L I+WE +P E QN Y
Sbjct: 677 AGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVITWEAIPEELQNGEGFGY 736
Query: 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
+ +R T + E + + + R S + +EVKV N+ G G S V +
Sbjct: 737 IVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIV 795
Query: 483 W 483
+
Sbjct: 796 Y 796
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
+++Y+W N L +++ R F+ + + + E D Y C N+ R
Sbjct: 152 ELSYAW-----TFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS 206
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-D 126
L L+ P + R E+ A + ++ + C P P WK+ D
Sbjct: 207 VQGPPTPLVLRTDGVMGEYEPKIEVRFPET-IQAAKDSSIKLECFALGNPVPDISWKRLD 265
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
G+ + G+ K ++ +L I ++D G Y C A N+ G + +KG+LI + P +EQ
Sbjct: 266 GSPMP--GKIKYSKSQAILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLI-FYAPPEWEQ 322
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
++ + +L C A + +Y W NG R+ + I I+ G L I
Sbjct: 323 KIQNTYLSIYDSLFWECKASGNP--NPSYTWLKNGQRLNTEE-------RIQIENGTLII 373
Query: 246 TNASFADAGEYECVVKS 262
T + +D+G Y+C ++
Sbjct: 374 TMLNISDSGIYQCAAEN 390
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 182/503 (36%), Gaps = 56/503 (11%)
Query: 5 ADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ C+ P + SW R E L + + F++D L I + D Y
Sbjct: 425 GDISIECKPNAFPKASISWKRGTENLK------QSKRVLFLEDGSLKICNVT-RADAGSY 477
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A NQ SS L V+ + P + + GE ++ + C P + FV
Sbjct: 478 TCVATNQFGNGKSSGGL-VVKERTIITVPPSKMDVTVGE--SIVLPCQVSHDPTMEVLFV 534
Query: 123 WKKDGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
W +G+II FE G+L+I + SG Y CT + +IV
Sbjct: 535 WYFNGDIIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIV 594
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
P E + + + L R + + I T +G + + P I
Sbjct: 595 RGPPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATV--PEI 652
Query: 237 NIDGGLLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGV 285
++G T + EYE V + +G + TK +V P PG +
Sbjct: 653 -LNGQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASV----PNVAPGNI 707
Query: 286 QVVEVHKTSATIQWT---DGATNGRP---ITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 339
++ I W + NG I ++ + T W + E V E ++
Sbjct: 708 NGGGGSRSELVITWEAIPEELQNGEGFGYIVMFRPVGTTAW------MKERVALVESSKF 761
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
R E+ ++P S +E KV N G G S+ + Y+ D+P AP
Sbjct: 762 IYRNES-----IMPLSPFEVKVGVYNNEGEGSLSTVTIVYSG-EDEPQLAPRGTSVQSFS 815
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
++ +SW + + + Y++ + N E ++ GNV I T
Sbjct: 816 ASEMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESMIGKIRVSGNV--TTKNITGLRANT 873
Query: 460 EYEVKVQAINDVGPGPESEVVTI 482
Y V+A N G GP S V +
Sbjct: 874 IYFASVRAYNTAGTGPSSLPVNV 896
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 28/291 (9%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+++++ TC A G P Y W +NG ++ Y + L I ++D
Sbjct: 42 SRSEIILTCTANGYPSPHYRWKQNGTDID-----FGMTYHYRLDGGSLAISSPRTDQDIG 96
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKF 121
+YQC A N + T S F+ + S EG V + C P + +
Sbjct: 97 IYQCLATNPVGTILSRKAKLQFAYIEDFETK-TRSTVSVREGQGVVLLCGPPPHFGELSY 155
Query: 122 VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIV 176
W D + +R+ + GNL + V D G Y+C TN +G +V
Sbjct: 156 AWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRSVQGPPTPLV 215
Query: 177 L--------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + P + P I A +++L C A + D+++ G +
Sbjct: 216 LRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNPVPDISWKRLDGSPMPGKIKY 275
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
++ + +LEI D G YEC+ + G+ K +I PP
Sbjct: 276 SKSQ--------AILEIPKFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPP 318
>sp|Q12860|CNTN1_HUMAN Contactin-1 OS=Homo sapiens GN=CNTN1 PE=1 SV=1
Length = 1018
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 246/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG+ +L+I+W PL RE N
Sbjct: 680 RVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRNRELTITWAPLSREYHYGNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S V
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLV 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTYGAI 400
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 110/499 (22%), Positives = 190/499 (38%), Gaps = 67/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
EYE V +T+G+ G P +P ++ + + +
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGR----------GEPSIPS--NRIKTDGAAPNVAPS 711
Query: 301 D-GATNGR---------PIT---HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G GR P++ HY I+A ++ W V+ V + RY
Sbjct: 712 DVGGGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 769
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 KDE-----TMSPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 823
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ WE + + + I Y K+ T +EY R+ + T+Y
Sbjct: 824 EISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYS------ARLENLLPDTQY 877
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+++
Sbjct: 878 FIEVGACNSAGCGPPSDMI 896
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDVDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
>sp|Q7ZW34|CNTN5_DANRE Contactin-5 OS=Danio rerio GN=cntn5 PE=2 SV=1
Length = 1056
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 238/495 (48%), Gaps = 40/495 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ L W C A G P TY W RNGE PL Q R + + LTI L + D
Sbjct: 359 LDSGEQLRWECRATGKPRPTYRWLRNGE-------PLSTQSRVEMVNGELTIHRLQ-QAD 410
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ YSSA+L++L P F P+ A G +V++ C P A+PKP+
Sbjct: 411 SGMYQCIAENKYGAIYSSAELKILASAPMFNNNPVR--LIATVGKDVSLECRPRASPKPR 468
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K+ + R + N L I SR D G Y C A N G E L+V P
Sbjct: 469 ISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKE-P 527
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
E P ++ + ++ L C + LDV+++W N N LN + DG
Sbjct: 528 MRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN-----NQPLNTQQ------DG 576
Query: 241 GLLEI--TNASFAD----------AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 288
G E T +S AD AG+Y C +++ + + ++V GPPG PG V V
Sbjct: 577 GHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVE 636
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
E+ ++AT+ W+ G N PIT Y + AR+ + W + + D TG E+++
Sbjct: 637 EITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QTVKTDPDPVTGSMESAMA 691
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L PW YEF+V+A N +G G+PS PS T P AP+ + GG G+ +L ISWE
Sbjct: 692 VDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWE 751
Query: 409 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
P+ E QN Y + +R N T E + + R + T +EV+V
Sbjct: 752 PVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYRDETFPPLTPFEVRVGVY 810
Query: 469 NDVGPGPESEVVTIW 483
N+ G GP SEVVT++
Sbjct: 811 NNKGDGPFSEVVTVF 825
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 106/271 (39%), Gaps = 33/271 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P TYSW NG +++E RY + D L I + D YQCRA+N
Sbjct: 81 CEARGNPVPTYSWLINGTNVDTEA-----DFRYSLIDGNLIIHNASEVIDYGRYQCRAEN 135
Query: 71 QLKTRYS-SAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVW--KK 125
+ S A L+ L P S K R S EG V + C P + +P+ + W +
Sbjct: 136 SIGIVLSRDALLQFAYLGPFSGKTRGAVS---VREGQGVVLMCAPPSHSPEIIYSWVFNE 192
Query: 126 DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHG- 179
+ + RR I E GNL I V D G Y C T TN + + G
Sbjct: 193 LPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLSPPTPLTLKTDGV 252
Query: 180 -----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
P P + A ++L C A + + + M N +
Sbjct: 253 MGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPVPTITW---------RKMSGNIPKKA 303
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVG 265
+ +LEI N D+G YEC ++T G
Sbjct: 304 RLRKSQAVLEIPNIQLEDSGSYECKAENTRG 334
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 182/509 (35%), Gaps = 71/509 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
D++ C P SW +N L + +++N T+R +N R D Y
Sbjct: 454 DVSLECRPRASPKPRISWRKNDRRLQP------SRRIMLLRNN--TLRIINSSRSDEGSY 505
Query: 65 QCRAKNQLKTRYSSAQLR-VLTLKPSFKKR--PLESETYAGEGGNVTIFCNPEAAPK--P 119
CRA+NQ + SA+L VL +K + PL E GE +V + C P
Sbjct: 506 VCRAENQ----FGSAELTTVLLVKEPMRVELSPLRVEVTVGE--SVVLSCKVTHDPSLDV 559
Query: 120 KFVWKKDG---NIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMDESKG 172
F+W + N GG + + +L+I + +G Y C A ++
Sbjct: 560 SFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEA 619
Query: 173 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
L+V P PP + I + + + + + I T+N + L +
Sbjct: 620 ELLVRGPPG-----PPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLG-WQ 673
Query: 233 TPNINIDGGLLEITNASFADAG-----EYECVVKSTVG---------KISTKTTVIVEGP 278
T + D + +A D E+ V +++G + TK V P
Sbjct: 674 TVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAP 733
Query: 279 PGLPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
+ GG + I W ++ NG Y + R N W + V +
Sbjct: 734 ANVRGG----NGRRHELVISWEPVSEEYQNGEGF-GYIVAFRVNGTRGW--KEKMVTSAD 786
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
Y R E P + +E +V N G G P S + +P + PS +
Sbjct: 787 STTYKYRDE-----TFPPLTPFEVRVGVYNNKGDG-PFSEVVTVFSAEGEPREPPSEVQA 840
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF--QSETLKEYGNVGIAVVRIP 453
++ + W+P P P Y FW+ E + TL N+ ++ +
Sbjct: 841 FAVSSSEIKVLWKP-PSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLD-- 897
Query: 454 SEFYYTEYEVKVQAINDVGPGPESEVVTI 482
T+Y V V+ N G GP S V I
Sbjct: 898 ---GNTQYLVSVKGFNSAGQGPSSTAVKI 923
>sp|Q07409|CNTN3_MOUSE Contactin-3 OS=Mus musculus GN=Cntn3 PE=2 SV=2
Length = 1028
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/496 (32%), Positives = 243/496 (48%), Gaps = 20/496 (4%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L W C A G P +Y W +NG+ L E +R I++ LTI LN D M+QC
Sbjct: 335 LYWECRASGKPKPSYRWLKNGDALVLE-------ERIQIENGALTITNLN-VTDSGMFQC 386
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A+N+ YSSA+L+V+ P F + P++ G V + C P A+P+ WKK
Sbjct: 387 IAENKHGLIYSSAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKG 446
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
++ R +G L I V++ D+G Y+CTA N G L+V P+
Sbjct: 447 DMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTE-PTRIILA 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 245
P + +A ++ L C + LLD+ + W NG D + E + G L+ I
Sbjct: 506 PSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDLM-I 564
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 305
N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + WT+G +
Sbjct: 565 RNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDS 624
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 365
P+ Y + ART ++ W +V + + +D G+ + L PW YEF+++A N
Sbjct: 625 HSPVISYAVQARTPFSVGWQSV--RTVPEVID---GKTHTATVVELNPWVEYEFRIVASN 679
Query: 366 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 425
++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y +
Sbjct: 680 KIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVA 739
Query: 426 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW-- 483
+R T + + N V R S ++ YEVKV N+ G GP S V T++
Sbjct: 740 FRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSA 798
Query: 484 -HDPLVIISYVCQGDL 498
+P V S++ L
Sbjct: 799 EEEPTVAPSHISAHSL 814
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 159
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKF-NGMLEIQNFQQEDTGSYEC 297
Query: 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219
A N G + ++GRL P Y+ QL + IA +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWLQLLRDVEIAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277
G D LE I I+ G L ITN + D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 407
Query: 278 P 278
P
Sbjct: 408 P 408
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG +++ RY + L + +NP R D Y
Sbjct: 46 ITLNCEARGNPSPHYRWQLNGSDIDTSL-----DHRYKLNGGNLIV--INPNRNWDTGSY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK R + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTR-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLI 175
+V+ + + + RR + E G+L I+ V D G Y+C T TN + ++
Sbjct: 157 WVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVL 216
Query: 176 VLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL- 228
G P Q P + A ++L C A + + N R M
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPQI------NWRRSDGMPFP 270
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
N+++ N G+LEI N D G YEC+ +++ GK
Sbjct: 271 NKIKLRKFN---GMLEIQNFQQEDTGSYECIAENSRGK 305
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 182/490 (37%), Gaps = 67/490 (13%)
Query: 22 SWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80
S+++ G+++ + +Q R F+ D L I + + D Y C A+NQ +
Sbjct: 441 SFWKKGDMM------VREQARVSFLNDGGLKIMNVT-KADAGTYTCTAENQFGKANGTTH 493
Query: 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKI 138
L V+T P + GE +V + C + P F W +G +
Sbjct: 494 L-VVTEPTRIILAPSNMDVAVGE--SVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSH 550
Query: 139 FE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 192
FE +G+L+I + SG Y C S LIV P E + K+
Sbjct: 551 FEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENV--KVDE 608
Query: 193 AAHRNLQLRCSAHTEELLDVA--YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 250
QL + T+ V + +G + + P + IDG T
Sbjct: 609 ITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSVRTV--PEV-IDGKTHTATVVEL 665
Query: 251 ADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
EYE V + +G K+ T+ P + GG ++ I W
Sbjct: 666 NPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGG----SRSELVITW 721
Query: 300 -------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+G G + ++ + T W + V + RY R E+ +V
Sbjct: 722 DPVPEELQNGGGFGY-VVAFRPLGVTTW------IQTVVTSPDNPRYVFRNES-----IV 769
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P+S YE KV N G G P SP + ++P APS I ++ +SW +P
Sbjct: 770 PFSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPW 828
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQAIND 470
+ N + Y++ + E S +K GN AV+R + S YYT V+A N
Sbjct: 829 KLSNGHLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYT----AVRAYNS 884
Query: 471 VGPGPESEVV 480
G GP S V
Sbjct: 885 AGAGPFSATV 894
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLES-ETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE 140
+L P F K P S E +T+ C P P + W+ +G +I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVDSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWVFNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV STV
Sbjct: 195 TCVVTSTV 202
>sp|O94779|CNTN5_HUMAN Contactin-5 OS=Homo sapiens GN=CNTN5 PE=2 SV=2
Length = 1100
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 22/486 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG +PL Q R + + VL I +N + D
Sbjct: 401 LDSGSPLRWECKATGKPRPTYRWLKNG-------VPLSPQSRVEMVNGVLMIHNVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L P+F L+ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASAPTFALNQLKKTIIVTKDQEVVIECKPQGSPKPT 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
WKK + R I +G+L I S+ D G Y C NV G E L V P
Sbjct: 513 ISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNI 236
+ E P + + ++ L C A + LDV + WT G I D E E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRA 628
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT
Sbjct: 629 QASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTAT 688
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ W+ A N PI+ Y + AR+ ++ W + + TG E+++ L PW
Sbjct: 689 LSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMESAMAVDLNPWVE 743
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I+WEP+ E QN
Sbjct: 744 YEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQN 803
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R N T E + + R S T +EVKV N+ G GP
Sbjct: 804 GEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPF 862
Query: 477 SEVVTI 482
S++V I
Sbjct: 863 SQIVVI 868
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 109/283 (38%), Gaps = 29/283 (10%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG ++ LE RY + D I + +D
Sbjct: 114 SDEKKVALNCEVRGNPVPSYRWLRNGTEID-----LESDYRYSLIDGTFIISNPSEAKDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
YQC A N + + S +F R S EG V + C+P +P+
Sbjct: 169 GHYQCLATNTVGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C T TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKAR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270
L + + +LEI N DAG YEC +++ GK S +
Sbjct: 347 LRKSQ--------AVLEIPNVQLDDAGIYECRAENSRGKNSFR 381
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 105/272 (38%), Gaps = 25/272 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNAR 279
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I V DD+GIY C A N G + +G+L V P + E+L
Sbjct: 340 YIPSKARLRK-SQAVLEIPNVQLDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKL-N 397
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + L+ C A + Y W NGV + E+ +N G+L I N
Sbjct: 398 DTQLDSGSPLRWECKATGKP--RPTYRWLKNGVPLSPQSRVEM----VN---GVLMIHNV 448
Query: 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGP 278
+ +DAG Y+C+ ++ G I S + ++ P
Sbjct: 449 NQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y F V A N GYG PSS T P QAPS R G ++ S+ WEP+
Sbjct: 946 YHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNLRWEQQGSQV---SLGWEPVIPLA 1001
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1002 NESEVVGYKVFYRQEGHSNSQVIETQKLQ-----AVVPLPDAGVYI---IEVRAYSEGGD 1053
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1054 GTASSQIRV 1062
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 165 HGMDESKGRLIVLHGPSYYEQLPPKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221
H D K V +GP + ++ P I T + + + L C + +Y W NG
Sbjct: 84 HSSDAFKQDESVDYGPVFVQE-PDDIIFPTDSDEKKVALNCEVRGNPV--PSYRWLRNGT 140
Query: 222 RIGNMDLNELETPNINIDGGLLEITNASFA-DAGEYECVVKSTVGKISTKTTVI 274
I DL E + IDG + I+N S A D+G Y+C+ +TVG I ++ +
Sbjct: 141 EI---DL-ESDYRYSLIDGTFI-ISNPSEAKDSGHYQCLATNTVGSILSREATL 189
>sp|Q63198|CNTN1_RAT Contactin-1 OS=Rattus norvegicus GN=Cntn1 PE=1 SV=2
Length = 1021
Score = 245 bits (626), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 250/485 (51%), Gaps = 26/485 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYAYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N T Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENAYGTIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ + P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITN-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELE-TPNINI 238
+ P I N ++C+A + LD+ ++W+ NG I N ++ + N +
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPSLDLTFVWSFNGYVIDFNKEITNIHYQRNFML 564
Query: 239 DG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
D G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS +
Sbjct: 565 DANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVAL 624
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W+ G+ N PI+ Y I +T + W + E G E++ L+PW Y
Sbjct: 625 TWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMESAKAVDLIPWMEY 679
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
EF+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE
Sbjct: 680 EFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYG 739
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
N Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 NNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798
Query: 478 EVVTI 482
+ I
Sbjct: 799 LIAVI 803
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEDRPEVKVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 97/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D+ + R+ V P +
Sbjct: 282 MPTTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGYAYHK---------------GE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++ G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENAYGTI 400
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 187/501 (37%), Gaps = 69/501 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
N S+ L V+T P+ ++ GE N T+ C P FVW +G
Sbjct: 488 NNRGKANSTGTL-VITNPTRIILAPINADITVGE--NATMQCAASFDPSLDLTFVWSFNG 544
Query: 128 NIIGSGG--------RRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178
+I R + + NG LLI +G Y+CTA + + L+V
Sbjct: 545 YVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
P L +I ++ L S ++ ++ +T I + D + +T I
Sbjct: 605 PPGPPGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPII 661
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
+G + EYE V T + G P +P ++ + +
Sbjct: 662 EGNMESAKAVDLIPWMEYEFRV--------VATNTLGTGEPSIPS--NRIKTDGAAPNVA 711
Query: 299 WTD---GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRY 339
+D G R +T HY I+A ++ W V+ V + RY
Sbjct: 712 PSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRY 769
Query: 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 399
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 770 VHKDET-----MTPSTAFQVKVKAFNNKGDG-PYSLIAVINSAQDAPSEAPTEVGVKVLS 823
Query: 400 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
++S+ W+ + + + I Y K+ T +EY R+ + T
Sbjct: 824 SSEISVHWKHVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDT 877
Query: 460 EYEVKVQAINDVGPGPESEVV 480
+Y ++V A N G GP S+V+
Sbjct: 878 QYFIEVGACNSAGCGPSSDVI 898
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 119/322 (36%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W +N+ + L + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKW-----RMNNGDVDLTN-DRYSMVGGNLVINNPDKQKDAGI 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P + RP E EG + + C+P
Sbjct: 112 YYCLASNNYGMVRSTEATLSFGYLDPFPPEDRP---EVKVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D +R +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPD---------IRWRKVL 279
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 280 EPMPTTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCVAT-GKPI 359
>sp|P12960|CNTN1_MOUSE Contactin-1 OS=Mus musculus GN=Cntn1 PE=1 SV=1
Length = 1020
Score = 244 bits (624), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 164/485 (33%), Positives = 250/485 (51%), Gaps = 26/485 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCIATGKPIPTIRWLKNGYSYHKGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N + Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKPK
Sbjct: 387 -GMYQCIAENAYGSIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPK 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F W K + + R I+E+G+L I+ ++R+D GIY+C A N G S G L++ + P
Sbjct: 446 FSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITN-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELE-TPNINI 238
+ P I N ++C+A + LD+ ++W+ NG I N ++ + N +
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKEITHIHYQRNFML 564
Query: 239 DG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 297
D G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS +
Sbjct: 565 DANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVAL 624
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W+ G+ N PI+ Y I +T + W + E G E++ L+PW Y
Sbjct: 625 TWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMESAKAVDLIPWMEY 679
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
EF+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE
Sbjct: 680 EFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYG 739
Query: 418 PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
N Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 NNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYS 798
Query: 478 EVVTI 482
V I
Sbjct: 799 LVAVI 803
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + + R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+G+Y C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGVYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVKVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD 250
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESET-------YAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ Y G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D G+Y C A N+ G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGLYECEAENIRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCIATGKPIPTIR--WLKNGY---------------SYHKGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++ G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENAYGSI 400
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 186/499 (37%), Gaps = 65/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + E L+NS + +D L I + D +Y C A+
Sbjct: 436 CKPKAAPKPKFSWSKGTEWLVNSSRI-------LIWEDGSLEINNIT-RNDGGIYTCFAE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N S+ L V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NNRGKANSTGTL-VITNPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGG--------RRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
I R + + NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 606
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L +I ++ L S ++ ++ +T I + D + +T I+G
Sbjct: 607 GPPGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEG 663
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
+ EYE V T + G P +P ++ + + +
Sbjct: 664 NMESAKAVDLIPWMEYEFRV--------VATNTLGTGEPSIPS--NRIKTDGAAPNVAPS 713
Query: 301 D---GATNGRPIT----------HYK-----IIARTNWN-STWFNVSEHVIGKEVDRYTG 341
D G R +T HY I+A ++ W V+ V + RY
Sbjct: 714 DVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVH 771
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
+ E + P + ++ KV A N G G P S N+ D P +AP+ +G
Sbjct: 772 KDET-----MTPSTAFQVKVKAFNNKGDG-PYSLVAVINSAQDAPSEAPTEVGVKVLSSS 825
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++S+ W+ + + + I Y K+ T +EY R+ + T+Y
Sbjct: 826 EISVHWKHVLEKIVESYQIRYWAGHDKEAAAHRVQVTSQEYS------ARLENLLPDTQY 879
Query: 462 EVKVQAINDVGPGPESEVV 480
++V A N G GP S+V+
Sbjct: 880 FIEVGACNSAGCGPSSDVI 898
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 120/322 (37%), Gaps = 36/322 (11%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ ++ C A P Y W +N+ + L + DRY + L I + ++D +
Sbjct: 58 EGKVSLNCRARASPFPVYKW-----RMNNGDVDLTN-DRYSMVGGNLVINNPDKQKDAGV 111
Query: 64 YQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 112 YYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVKVKEGKGMVLLCDPPYHFPDDL 168
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 169 SYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNYSCFVSSPSITKSVFSKFIP 228
Query: 177 LHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
L P I +N+ L C A + D +R +
Sbjct: 229 LIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNPVPD---------IRWRKVL 279
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 280 EPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKDKHQARIYVQAFPEWVEHIND 339
Query: 288 VEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 340 TEV-DIGSDLYWPCIAT-GKPI 359
>sp|P97527|CNTN5_RAT Contactin-5 OS=Rattus norvegicus GN=Cntn5 PE=1 SV=1
Length = 1099
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 231/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG PL Q R + VL I +N + D
Sbjct: 401 LDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTANGVLAIHSVN-QSD 452
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L PSF+ ++ + V I C P+ +PKP
Sbjct: 453 AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDREVLIECKPQGSPKPA 512
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + R I +G+L I S+ D G Y C N+ G E + V P
Sbjct: 513 ISWRKGDKAVRGNKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASVSVKE-P 571
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E+
Sbjct: 572 TRIELTPKRTELTVGESIVLNCKAMHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQAS 631
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 632 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 691
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 692 SPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 746
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + GG G+ +L I+WEP+ E QN
Sbjct: 747 RVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGGSGRRHELVIAWEPVSEEFQNGEG 806
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + + R S T +EVKV N+ G GP S++
Sbjct: 807 FGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 865
Query: 480 VTI 482
V I
Sbjct: 866 VVI 868
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 125/326 (38%), Gaps = 31/326 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P TY W RNG ++ LE RY + D I + RD
Sbjct: 114 SDEKKVALNCEVRGNPSPTYRWLRNGTEID-----LESDYRYSMIDGTFIINNPSESRDS 168
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
+YQC A N + S +F R S EG V + C+P +P+
Sbjct: 169 GLYQCLATNTFGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 227
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C TN +
Sbjct: 228 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPL 287
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 288 TLRNDGVMGEYEPKIEVHFPTTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSR 346
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L + + +LEI N DAG YEC +++ GK S + + + P +
Sbjct: 347 LRKSQ--------AVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKLND 398
Query: 288 VEVHKTSATIQWTDGATNGRPITHYK 313
++ S +QW AT G+P Y+
Sbjct: 399 TQLDSGSP-LQWECKAT-GKPRPTYR 422
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 105/275 (38%), Gaps = 26/275 (9%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 224 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNAR 279
Query: 77 SSAQLRVLTLK---------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
+ LTL+ P + + A +G V + C P P W K
Sbjct: 280 VLSPPTPLTLRNDGVMGEYEPKIEVH-FPTTVTAAKGTTVKMECFALGNPVPTITWMKVN 338
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
I S R + L I + DD+GIY CTA N G + +G+L + P + ++L
Sbjct: 339 GYIPSKSRLRK-SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKL- 396
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
+ + LQ C A + Y W NG + L ++ G+L I +
Sbjct: 397 NDTQLDSGSPLQWECKATGKP--RPTYRWLKNGAPL-------LPQSRVDTANGVLAIHS 447
Query: 248 ASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+ +DAG Y+C+ ++ G I + I+ PP
Sbjct: 448 VNQSDAGMYQCLAENKYGAIYASAELKILASPPSF 482
>sp|Q9P232|CNTN3_HUMAN Contactin-3 OS=Homo sapiens GN=CNTN3 PE=1 SV=3
Length = 1028
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 242/497 (48%), Gaps = 20/497 (4%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
L W C A G P +Y W +NG L E +R I++ LTI L+ D M+Q
Sbjct: 334 SLYWECRASGKPKPSYRWLKNGAALVLE-------ERTQIENGALTISNLS-VTDSGMFQ 385
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N+ YSSA+L+V+ P F K P++ G V++ C P A+P+ WKK
Sbjct: 386 CIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKK 445
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ R + +G L I+ V++ D+G Y+C A N G L+V P+
Sbjct: 446 GDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTE-PTRITL 504
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLE 244
P + ++ ++ L C + LLD+ + W NG D + E + G L+
Sbjct: 505 APSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLM- 563
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + W +G
Sbjct: 564 IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKD 623
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
N P+ Y I ART ++ W V+ + + +D G+ + L PW YEF+V+A
Sbjct: 624 NHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GKTHTATVVELNPWVEYEFRVVAS 678
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G GEPS PS + T P PS + GGGG +L I+W+P+P E QN Y +
Sbjct: 679 NKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVV 738
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW- 483
+R T + +T+ + V R S Y+ YEVKV N+ G GP S V T++
Sbjct: 739 AFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFS 797
Query: 484 --HDPLVIISYVCQGDL 498
+P V S V L
Sbjct: 798 AEEEPTVAPSQVSANSL 814
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER--DPAMY 64
+T CEA G P Y W NG ++ + + RY + L + +NP R D Y
Sbjct: 46 ITLHCEARGNPSPHYRWQLNGSDID-----MSMEHRYKLNGGNLVV--INPNRNWDTGTY 98
Query: 65 QCRAKNQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPK 120
QC A N L T S A+L+ L+ +FK + + S EG V + C P
Sbjct: 99 QCFATNSLGTIVSREAKLQFAYLE-NFKTK-MRSTVSVREGQGVVLLCGPPPHSGELSYA 156
Query: 121 FVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL-- 177
+++ + + + RR + E G+L IS V D G Y+C T++ G L
Sbjct: 157 WIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVL 216
Query: 178 --------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229
+ P Q P + A ++L C A + + + + + L
Sbjct: 217 RSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLR 276
Query: 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266
+ G+LEI N DAG YEC+ +++ GK
Sbjct: 277 KFS--------GVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 115/497 (23%), Positives = 180/497 (36%), Gaps = 56/497 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P SW + G++ +++ +R + D L I + + D Y C A+
Sbjct: 431 CKPRASPRALSSW-KKGDV------SVQEHERISLLNDGGLKIANVT-KADAGTYTCMAE 482
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDG 127
NQ + L V+T P + GE +V + C + P F W +G
Sbjct: 483 NQFGKANGTTHL-VVTEPTRITLAPSNMDVSVGE--SVILPCQVQHDPLLDIIFTWYFNG 539
Query: 128 NIIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+ FE +G+L+I + SG Y C S LIV P
Sbjct: 540 ALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
E + L + + I +G + + P + IDG
Sbjct: 600 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTV--PEV-IDGK 656
Query: 242 LLEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEV 290
T EYE V + +G K+ T+ V P + GG
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGG---- 712
Query: 291 HKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ I W + NG Y + R +TW + V + RY R E+
Sbjct: 713 SRSELVITWDPVPEELQNGEGF-GYVVAFRPLGVTTW--IQTVVTSPDTPRYVFRNES-- 767
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+VP+S YE KV N G G P SP + ++P APS++ ++ +SW
Sbjct: 768 ---IVPYSPYEVKVGVYNNKGEG-PFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSW 823
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKV 465
+P + N + Y++ + E S +K GN A +R + S YYT V
Sbjct: 824 NTIPWKLSNGHLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYT----AV 879
Query: 466 QAINDVGPGPESEVVTI 482
+A N G GP S V +
Sbjct: 880 RAYNSAGAGPFSATVNV 896
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 83 VLTLKPSFKKRPLESETYAG-EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE 140
+L P F K P S G E +T+ C P P + W+ +G+ I S R
Sbjct: 21 LLLQGPVFIKEPSNSIFPVGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLN 80
Query: 141 NGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNL 198
GNL++ +R+ D+G Y C ATN G S+ +L + ++ ++ +++ + +
Sbjct: 81 GGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGV 140
Query: 199 QLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256
L C H+ EL +Y W N + E ++ + G L I+ +D G Y
Sbjct: 141 VLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNY 194
Query: 257 ECVVKSTV 264
CVV S V
Sbjct: 195 TCVVTSMV 202
>sp|P68500|CNTN5_MOUSE Contactin-5 OS=Mus musculus GN=Cntn5 PE=1 SV=2
Length = 1098
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 230/483 (47%), Gaps = 16/483 (3%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D+ + L W C+A G P TY W +NG PL Q R + +L I+ +N + D
Sbjct: 400 LDSGSPLQWECKATGKPRPTYRWLKNGA-------PLLPQSRVDTVNGILAIQSVN-QSD 451
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ Y+SA+L++L PSF+ ++ + V I C P+ +PKP
Sbjct: 452 AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPA 511
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W+K + + R I +G+L I S+ D G Y C N+ G E L V P
Sbjct: 512 ISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-P 570
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ E P + + ++ L C A + LDV + WT G I + E
Sbjct: 571 TRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEKEGGHFENIRAQAS 630
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
L I N AG Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W
Sbjct: 631 SADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSW 690
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ N PI+ Y + AR+ ++ W + + TG E+++ L PW YEF
Sbjct: 691 SPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMESAMAVDLNPWVEYEF 745
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N +G G+PS PS T P APS + G G+ +L I+WEP+ E QN
Sbjct: 746 RVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEG 805
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +R N T E + + R S T +EVKV N+ G GP S++
Sbjct: 806 FGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQI 864
Query: 480 VTI 482
V I
Sbjct: 865 VVI 867
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 124/326 (38%), Gaps = 31/326 (9%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
++ + CE G P +Y W RNG + LE RY + D I + RD
Sbjct: 113 SDEKKVALNCEVRGNPSPSYRWLRNGT-----EIALESDYRYSLIDGTFIISNPSELRDS 167
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPK 120
+YQC A N + S +F R S EG V + C+P +P+
Sbjct: 168 GLYQCLATNSFGSILSREATLQFAYLGNFSGR-TRSAVSVREGQGVVLMCSPPPHSPEII 226
Query: 121 FVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGR 173
+ W + + + RR I E GNL IS V D G Y C TN +
Sbjct: 227 YSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPL 286
Query: 174 LIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227
+ G P P +T A +++ C A + + ++ NG
Sbjct: 287 TLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKV-NGYIPSKSR 345
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 287
L + + +LEI N DAG YEC +++ GK S + + + P +
Sbjct: 346 LRKSQ--------AVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKLND 397
Query: 288 VEVHKTSATIQWTDGATNGRPITHYK 313
++ S +QW AT G+P Y+
Sbjct: 398 TQLDSGSP-LQWECKAT-GKPRPTYR 421
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 104/274 (37%), Gaps = 24/274 (8%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76
P++ YSW N + ED R+ Q+ D Y C KN +
Sbjct: 223 PEIIYSWVFN----EFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNAR 278
Query: 77 SSAQLRVLTLKPSFKKRPLESE--------TYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128
+ LTL+ E + A +G V + C P P W K
Sbjct: 279 VLSPPTPLTLRNDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKVNG 338
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
I S R + L I + DD+GIY CTA N G + +G+L + P + ++L
Sbjct: 339 YIPSKSRLRK-SQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIFTYPHWVQKL-N 396
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248
+ + LQ C A + Y W NG + L ++ G+L I +
Sbjct: 397 DTQLDSGSPLQWECKATGKP--RPTYRWLKNGAPL-------LPQSRVDTVNGILAIQSV 447
Query: 249 SFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
+ +DAG Y+C+ ++ G I + I+ PP
Sbjct: 448 NQSDAGMYQCLAENKYGAIYASAELKILASPPSF 481
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREK 414
Y V A N GYG PS + T P + P R G ++ S+ WEP+
Sbjct: 945 YHLTVRAYNGAGYGPPSREA-STTTKRHPPREPPGNLRWEQQGSQV---SLGWEPVRPLA 1000
Query: 415 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
+ + YK+F+R++ +E Q ET K AVV +P Y ++V+A ++ G
Sbjct: 1001 NESEVMGYKVFYRQEGHSEGQVIETQKPQ-----AVVPLPEAGVYI---IEVRAYSEGGD 1052
Query: 474 GPESEVVTI 482
G S + +
Sbjct: 1053 GTASSQIRV 1061
>sp|Q28106|CNTN1_BOVIN Contactin-1 OS=Bos taurus GN=CNTN1 PE=2 SV=1
Length = 1018
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 242/483 (50%), Gaps = 24/483 (4%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D +DL W C A G P T W +NG + L L D + + N
Sbjct: 342 VDIGSDLYWPCVATGKPIPTIRWLKNGYSYHRGELRLYD------------VTFENA--- 386
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N Y++A+L++L L P+F+ P++ + A +GG V I C P+AAPKP
Sbjct: 387 -GMYQCIAENTHGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPT 445
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
F+W K + + R I+E+G+L I+ ++R D G+Y+C N G S G L++ P
Sbjct: 446 FLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITD-P 504
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ P I N ++C+A + LD+ ++W+ NG I N N +D
Sbjct: 505 TRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDS 564
Query: 241 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W
Sbjct: 565 NGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTW 624
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G+ N PI+ Y I +T + W + E G EA+ L+PW YEF
Sbjct: 625 SRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAARAVDLIPWMEYEF 679
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 680 RVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYFNN 739
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S
Sbjct: 740 FGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLT 798
Query: 480 VTI 482
I
Sbjct: 799 AVI 801
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 20/222 (9%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+ + Y E G V++ C A+P P + W+ + I R GNL+
Sbjct: 41 PIFEEQPINT-IYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLV 99
Query: 146 I-SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQL 200
I +P + D+GIY C A+N +GM S + Y + P P++ + + + L
Sbjct: 100 INNPDKQKDAGIYYCLASNNYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVL 156
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + MD ++ G L I N +D G Y C
Sbjct: 157 LCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCF 212
Query: 260 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTD 301
V S S +V + P +P + + + +Q+ D
Sbjct: 213 VSSP----SITKSVFSKFIPLIPLPERTTKPYPADIVVQFKD 250
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 99/265 (37%), Gaps = 46/265 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 167 DLSYRW-----LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 221
Query: 77 SSAQLRVLTLKPSFKKRPLESE-------TYAGEGGNVTIFCNPEAAPKPKFVWKK---- 125
++ L P +P ++ YA G NVT+ C P P W+K
Sbjct: 222 VFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 281
Query: 126 ---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I SG KIF + +D GIY C A N G D+ + R+ V P +
Sbjct: 282 MPSTAEISTSGAVLKIFN--------IQLEDEGIYECEAENNRGKDKHQARIYVQAFPEW 333
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
E + + +L C A + + + W NG + G
Sbjct: 334 VEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLKNGY---------------SYHRGE 375
Query: 243 LEITNASFADAGEYECVVKSTVGKI 267
L + + +F +AG Y+C+ ++T G I
Sbjct: 376 LRLYDVTFENAGMYQCIAENTHGAI 400
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 120/324 (37%), Gaps = 40/324 (12%)
Query: 4 QADLTWTCEAFGVPDVTYSW-FRNGEL-LNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
+ ++ C A P Y W NG++ L S DRY + L I + ++D
Sbjct: 58 EGKVSLNCRARASPFPVYKWRMNNGDIDLTS--------DRYSMVGGNLVINNPDKQKDA 109
Query: 62 AMYQCRAKNQL-KTRYSSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y C A N R + A L L P ++RP E EG + + C+P
Sbjct: 110 GIYYCLASNNYGMVRSTEATLSFGYLDPFPPEERP---EVRVKEGKGMVLLCDPPYHFPD 166
Query: 120 KFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174
++ N I RR + + NGNL I+ V D G YSC ++ +
Sbjct: 167 DLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 226
Query: 175 IVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
I L P I +N+ L C A + D +R
Sbjct: 227 IPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPD---------IRWRK 277
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 285
+ T I+ G +L+I N D G YEC ++ GK + + V+ P +
Sbjct: 278 VLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI 337
Query: 286 QVVEVHKTSATIQWTDGATNGRPI 309
EV + + W AT G+PI
Sbjct: 338 NDTEV-DIGSDLYWPCVAT-GKPI 359
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 184/490 (37%), Gaps = 51/490 (10%)
Query: 11 CEAFGVPDVTYSWFRNGE-LLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P T+ W + E L+NS + +D L I + D +Y C +
Sbjct: 436 CKPKAAPKPTFLWSKGTERLVNSSRI-------LIWEDGSLEINNIT-RSDGGVYTCFVE 487
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N K + +S V+T P+ ++ GE + + + A FVW +G +
Sbjct: 488 NN-KGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYV 546
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I ++ NG LLI +G Y+CTA + + L+V P
Sbjct: 547 IDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGP 606
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
L +I ++ L S ++ ++ +T I + D + +T I+G +
Sbjct: 607 PGGL--RIEDIRATSVALTWSRGSDNHSPISK-YTIQTKTILSDDWKDAKTDPPIIEGNM 663
Query: 243 LEITNASFADAGEYE--CVVKSTVG---------KISTKTTVIVEGPPGLPGGVQVVEVH 291
EYE V +T+G KI T P + GG
Sbjct: 664 EAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGG----S 719
Query: 292 KTSATIQWTDGATNGRPITHYK-IIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W + ++ I+A ++ W V+ V + RY + E
Sbjct: 720 NRELTITWAPLSREYHYFNNFGYIVAFKPFDGEEWKKVT--VTNPDTGRYVHKDE----- 772
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + ++ KV A N G G P S + ++ D P +AP+ +G ++S+ WE
Sbjct: 773 TMRPSTAFQVKVKAFNNKGDG-PYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHWEH 831
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + + I Y K+ +EY R+ + T+Y V+V+A N
Sbjct: 832 VVEKIVESYQIRYWASHDKEAAAHRVQVASQEYS------ARLENLLPDTQYFVEVRACN 885
Query: 470 DVGPGPESEV 479
G GP S++
Sbjct: 886 SAGCGPPSDM 895
>sp|P14781|CNTN1_CHICK Contactin-1 OS=Gallus gallus GN=CNTN1 PE=1 SV=1
Length = 1010
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 239/483 (49%), Gaps = 24/483 (4%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W C A G P T W +NG L ++ LT D
Sbjct: 334 DIGSDLYWPCVATGKPIPTIRWLKNGVSFRKGELRIQG----------LTFE------DA 377
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N Y++A+L+++ P+F+ P++ + A +GG V I C P+AAPKPKF
Sbjct: 378 GMYQCIAENAHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKF 437
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
W K ++ +G R I+++G+L I V++ D G Y+C A N G S G L + +
Sbjct: 438 SWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEA-T 496
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DG 240
P + + N ++C A + LD+ +IW+ NG I +E N+ I
Sbjct: 497 RITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSN 556
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I N AG Y C ++ V S ++V GPPG PGG+++ E+ T+ + W+
Sbjct: 557 GELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGIRIEEIRDTAVALTWS 616
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI+ Y I ++T + W + E G E++ L+PW YEF+
Sbjct: 617 RGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDIEGNMESARVIDLIPWMEYEFR 671
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+IA N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 672 IIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNF 731
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + ++ + E++ T+ +G V + S T+Y+VKV+A N G GP S
Sbjct: 732 GYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPSTQYQVKVKAFNSKGDGPFSLTA 790
Query: 481 TIW 483
I+
Sbjct: 791 VIY 793
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 103/279 (36%), Gaps = 50/279 (17%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRY 76
D++Y W LLN + + R F+ + N E D Y C + T+
Sbjct: 159 DLSYRW-----LLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITK- 212
Query: 77 SSAQLRVLTLKPSFKKRPLE--------SETYAGEGGNVTIFCNPEAAPKPKFVWKK--- 125
S + + L P + + +TYA G NVT+ C P P+ W K
Sbjct: 213 -SVFSKFIPLIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLE 271
Query: 126 ----DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I SG KIF + +D G+Y C A N G D+ + R+ V P
Sbjct: 272 PMPATAEISMSGAVLKIFN--------IQYEDEGLYECEAENYKGKDKHQARVYVQASPE 323
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ E + +L C A + + + W NGV + G
Sbjct: 324 WVEHI-NDTEKDIGSDLYWPCVATGKPIPTIR--WLKNGV---------------SFRKG 365
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 279
L I +F DAG Y+C+ ++ G I + IV PP
Sbjct: 366 ELRIQGLTFEDAGMYQCIAENAHGIIYANAELKIVASPP 404
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 112/292 (38%), Gaps = 33/292 (11%)
Query: 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
+ ++ C A VP TY W LN+ + L +DRY + L I RD
Sbjct: 49 SDGQVSMNCRARAVPFPTYKW-----KLNNWDIDL-TKDRYSMVGGRLVISNPEKSRDAG 102
Query: 63 MYQCRAKNQLKT-RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
Y C N T R S A L L P + E + G G + C P
Sbjct: 103 KYVCVVSNIFGTVRSSEATLSFGYLDPFPPEEHYEVKVREGVGA--VLLCEPPYHYPDDL 160
Query: 122 VWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
++ N I RR + + NGNL I+ V D G YSC ++ + I
Sbjct: 161 SYRWLLNEFPVFIALDRRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP 220
Query: 177 LHGPSYYEQLPP-------KITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + ++ P K T A +N+ L C A + ++ + + L
Sbjct: 221 LIPQADRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRW----------SKYL 270
Query: 229 NEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ T I++ G +L+I N + D G YEC ++ GK + V V+ P
Sbjct: 271 EPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASP 322
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 178/493 (36%), Gaps = 51/493 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELL-NSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK 69
C+ P +SW + ELL N + + D D L I + + D Y C A+
Sbjct: 427 CKPKAAPKPKFSWSKGTELLVNGSRIHIWD-------DGSLEIINVT-KLDEGRYTCFAE 478
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N + + +S + +T PL + GE + + + F+W +G +
Sbjct: 479 NN-RGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNGFV 537
Query: 130 IGSGGRRKIFE-------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
I + +E NG LLI V +G Y+CTA + + L+V P
Sbjct: 538 IDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPPGP 597
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 242
+ +I + L S T+ ++ +T + + + +T +I+G +
Sbjct: 598 PGGI--RIEEIRDTAVALTWSRGTDNHSPISK-YTIQSKTFLSEEWKDAKTEPSDIEGNM 654
Query: 243 LEITNASFADAGEYECVVKST----VGKISTKTTVI-VEG-PPGL-PGGVQVVEVHKTSA 295
EYE + +T G+ S + I EG PP + P V
Sbjct: 655 ESARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNREL 714
Query: 296 TIQWT------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349
TI W N I +K W V E+ RY + E+
Sbjct: 715 TITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRV------TVTNPEIGRYVHKDES---- 764
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ P + Y+ KV A N G G P S + + D P + P+ + ++S+SW
Sbjct: 765 -MPPSTQYQVKVKAFNSKGDG-PFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHH 822
Query: 410 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469
+ + I Y K+ + + +EY ++ + T Y + V A N
Sbjct: 823 VTEKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYST------KLENLKPNTRYHIDVSAFN 876
Query: 470 DVGPGPESEVVTI 482
G GP S + I
Sbjct: 877 SAGYGPPSRTIDI 889
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 73/183 (39%), Gaps = 16/183 (8%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145
P F+++P+++ Y E G V++ C A P P + WK + I R G L+
Sbjct: 33 PVFEEQPIDT-IYPEESSDGQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLV 91
Query: 146 IS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQL 200
IS P D+G Y C +N+ G S + Y + PP ++ + L
Sbjct: 92 ISNPEKSRDAGKYVCVVSNIFGTVRSSEATLSF---GYLDPFPPEEHYEVKVREGVGAVL 148
Query: 201 RCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECV 259
C D++Y W N + +D ++ G L I N +D G Y C
Sbjct: 149 LCEPPYHYPDDLSYRWLLNEFPVFIALDRRRF----VSQTNGNLYIANVEASDKGNYSCF 204
Query: 260 VKS 262
V S
Sbjct: 205 VSS 207
>sp|Q61330|CNTN2_MOUSE Contactin-2 OS=Mus musculus GN=Cntn2 PE=2 SV=2
Length = 1040
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 236/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L LN E D
Sbjct: 341 DIGSNLRWGCAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLNLE-DS 392
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 393 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATI 452
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 453 LWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 511
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + + + ++
Sbjct: 512 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETI 571
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 572 GDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 631
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + + E G E + L+PW YEF+
Sbjct: 632 RGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEFR 686
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPS PS + T P APS + GGGG G+L+I+W P+ RE QN
Sbjct: 687 VSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGF 746
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ + +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 747 GYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTA 805
Query: 481 TIW 483
++
Sbjct: 806 IVY 808
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 119/291 (40%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG +N LE R+ + L I +D +YQC
Sbjct: 59 VTLACRARASPPATYRWKMNGTEMN-----LEPGSRHQLMGGNLVIMSPTKAQDAGVYQC 113
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 114 LASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 171
Query: 124 -KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ +D S +
Sbjct: 172 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HLDFSTKSVFSKFAQL 229
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + PP+ + + L C A + RI +
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 278
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 279 DGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 329
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 112/274 (40%), Gaps = 34/274 (12%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + L
Sbjct: 164 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHLDF 217
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C P P+ W+
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFGNPVPRIKWR 276
Query: 125 K-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
K DG++ G + L I VS +D G Y C A N G D +GR+IV P +
Sbjct: 277 KVDGSLSPQWGTAE----PTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWL 332
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ + NL+ C+A + V W NG + + + + + G L
Sbjct: 333 KVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDL 382
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ + D+G Y+CV ++ G I + V+
Sbjct: 383 RFSKLNLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 190/496 (38%), Gaps = 54/496 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMY 64
+++ C+ P T W + E+L + T R + D L IR ++ D Y
Sbjct: 437 EISIPCQPRAAPKATILWSKGTEILGNST-------RVTVTLDGTLIIRNIS-RSDEGKY 488
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FV 122
C A+N + S+ +L+++ + K S G N+T+ C+ P F
Sbjct: 489 TCFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFT 545
Query: 123 WKKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175
W D + G RR + G+L I G Y+C A V +D +
Sbjct: 546 WTLDDFPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTV--VDGASKEAT 603
Query: 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
VL + +QL S + +A +T + ++ T
Sbjct: 604 VLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWKQVRTNP 662
Query: 236 INIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLPGG 284
+NI+G +YE V ++ +I TK V P P G
Sbjct: 663 VNIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAV----PSVAPSG 718
Query: 285 VQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ TI WT + NG Y + R +S+W + V G + +
Sbjct: 719 LSGGGGAPGELTINWTPMSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGADTQYFVY 775
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
++ + P++ +E K+ + N G G P S + + ++P AP+++ G
Sbjct: 776 SNDS-----IHPYTPFEVKIRSYNRRGDG-PESLTAIVYSAEEEPKVAPAKVWAKGSSSS 829
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++++SWEP+ + N + Y+I + K D E ++ ++ G A R+ + T+Y
Sbjct: 830 EMNVSWEPV-LQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSA--RVTGLYPNTKY 886
Query: 462 EVKVQAINDVGPGPES 477
V V+A N G GP S
Sbjct: 887 HVTVRAYNRAGTGPAS 902
>sp|P22063|CNTN2_RAT Contactin-2 OS=Rattus norvegicus GN=Cntn2 PE=1 SV=1
Length = 1040
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 236/490 (48%), Gaps = 30/490 (6%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P W RNGE PL Q+R + L L+ E D
Sbjct: 341 DIGSNLRWGCAAAGKPRPMVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 392
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F++ P+ A GG ++I C P AAPK
Sbjct: 393 GMYQCVAENKHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATI 452
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+G+ R + +G L+I +SR D G Y+C A N G S G L V +
Sbjct: 453 LWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDA-T 511
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + +
Sbjct: 512 KITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRASAKETI 571
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 572 GDLTILNAHVRHGGKYTCMAQTVVDGTSKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWS 631
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART + W V + + E G E + L+PW YEF+
Sbjct: 632 RGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEFR 686
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V A N LG GEPS PS + T P APS + GGGG G+L I+W P+ RE QN
Sbjct: 687 VSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVSREYQNGDGF 746
Query: 421 YYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
Y + +R++ + +Q+ + YGN I YT +EVK+++ N G
Sbjct: 747 GYLLSFRRQGSSSWQTARVPGADAQYFVYGNDSIQP--------YTPFEVKIRSYNRRGD 798
Query: 474 GPESEVVTIW 483
GPES ++
Sbjct: 799 GPESLTALVY 808
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 119/291 (40%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T C A P TY W NG +N LE R+ + L I +D +YQC
Sbjct: 59 VTLACRARASPPATYRWKMNGTDMN-----LEPGSRHQLMGGNLVIMSPTKTQDAGVYQC 113
Query: 67 RAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW- 123
A N + T S A LR L+ K+ +T+ EG V + CNP A P + W
Sbjct: 114 LASNPVGTVVSKEAVLRFGFLQEFSKEERDPVKTH--EGWGVMLPCNPPAHYPGLSYRWL 171
Query: 124 -KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV----- 176
+ N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 172 LNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQL 229
Query: 177 --------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L PS + PP+ + + L C A + RI +
Sbjct: 230 NLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV-----------PRIKWRKV 278
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 279 DGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 329
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 164 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTN-ASDLGNYSCLATSHMDF 217
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R ETYA G VT+ C P P+ W+
Sbjct: 218 STKSVFSKFAQLNLAAEDPRLFAPSIKAR-FPPETYALVGQQVTLECFAFGNPVPRIKWR 276
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 277 K---VDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 333
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 334 VI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRNGEPLASQN-------RVEVLAGDLR 383
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 384 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 186/495 (37%), Gaps = 52/495 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
+++ C+ P T W + E+L + T D L IR ++ D Y
Sbjct: 437 EISILCQPRAAPKATILWSKGTEILGNST------RVTVTSDGTLIIRNIS-RSDEGKYT 489
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVW 123
C A+N + S+ +L+++ + K S G N+T+ C+ P F W
Sbjct: 490 CFAENFMGKANSTG---ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTW 546
Query: 124 KKDGNII-----GSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
D I G RR + G+L I G Y+C A V +D + V
Sbjct: 547 TLDDFPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTV--VDGTSKEATV 604
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
L + +QL S + +A +T + ++ T +
Sbjct: 605 LVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAK-YTLQARTPPSGKWKQVRTNPV 663
Query: 237 NIDGGLLEITNASFADAGEYECVVKST-----------VGKISTKTTVIVEGPPGLPGGV 285
NI+G +YE V ++ KI TK V P P G+
Sbjct: 664 NIEGNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAV----PSVAPSGL 719
Query: 286 QVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342
I WT + NG Y + R +S+W + V G + +
Sbjct: 720 SGGGGAPGELIINWTPVSREYQNGDGF-GYLLSFRRQGSSSW--QTARVPGADAQYFVYG 776
Query: 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 402
++ + P++ +E K+ + N G G P S + + ++P AP+++ G +
Sbjct: 777 NDS-----IQPYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPAKVWAKGSSSSE 830
Query: 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462
+++SWEP+ + N + Y+I + K D E ++ ++ G A R+ T+Y
Sbjct: 831 MNVSWEPV-LQDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSA--RVTGLNPNTKYH 887
Query: 463 VKVQAINDVGPGPES 477
V V+A N G GP S
Sbjct: 888 VTVRAYNRAGTGPAS 902
>sp|P28685|CNTN2_CHICK Contactin-2 OS=Gallus gallus GN=CNTN2 PE=1 SV=1
Length = 1036
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 236/484 (48%), Gaps = 18/484 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D +DL W+C A G P W R+G+ PL Q+R + L L E D
Sbjct: 334 DIGSDLRWSCVASGKPRPAVRWLRDGQ-------PLASQNRIEVSGGELRFSKLVLE-DS 385
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P++ A G V I C P AAPK
Sbjct: 386 GMYQCVAENKHGTVYASAELTVQALAPDFRLNPVKRLIPAARSGKVIIPCQPRAAPKATV 445
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K ++ + R I +G L++ +S+ D G Y+C A N G S G ++ + +
Sbjct: 446 LWTKGTELLTNSSRVTITADGTLILQNISKSDEGKYTCFAENFMGKANSTG-ILSVRDAT 504
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE--LETPNINID 239
P I NL L+C A + +D+ + W+ + I ++D +E ++
Sbjct: 505 KITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDFPI-DLDKSEGHYRRASVKEA 563
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299
G L I NA +G Y C ++ V S T+ V GPPG PGGV V ++ T+ + W
Sbjct: 564 VGDLAIVNAQLKHSGRYTCTAQTVVDSTSESATLTVRGPPGPPGGVVVRDIGDTTVQLSW 623
Query: 300 TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEF 359
+ G N PI Y I ART ++ W + + + E G E + L+PW YEF
Sbjct: 624 SRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIE-----GNAETAQVVNLIPWMDYEF 678
Query: 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419
+V+A N LG GEPS PS + T P APS +GGGGG +L I+W P R+ QN
Sbjct: 679 RVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNELIINWTPTLRDYQNGDG 738
Query: 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y + +RKK + + + ++ V R S YT +EVK++A N G GPES
Sbjct: 739 FGYILSFRKKGTQGWLTARVPHAESLHY-VYRNESIGPYTPFEVKIKAYNRKGEGPESLT 797
Query: 480 VTIW 483
++
Sbjct: 798 AIVY 801
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLK-- 73
P ++Y W LLN + R F+ + E D Y C A + +
Sbjct: 157 PALSYRW-----LLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFI 211
Query: 74 TRYSSAQLRVLTLK--------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
T+ ++ L+L PS K + ++TYA G VT+ C P P+ W+K
Sbjct: 212 TKSVFSKFSQLSLAAEDARQYAPSIKAK-FPADTYALTGQMVTLECFAFGNPVPQIKWRK 270
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ GS + + L I V +D G Y C A N+ G D +GR+I+ P + +
Sbjct: 271 ---LDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDV 327
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ A LR S A W +G + + + I + GG L
Sbjct: 328 I---TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQN-------RIEVSGGELRF 377
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ D+G Y+CV ++ G + + V+
Sbjct: 378 SKLVLEDSGMYQCVAENKHGTVYASAELTVQA 409
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 110/291 (37%), Gaps = 38/291 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
+T TC A P TY W NG L + RY + L I +D YQC
Sbjct: 52 VTLTCRARANPPATYRWKMNG-----TELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQC 106
Query: 67 RAKNQLKT---RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFV 122
A N T R +S + L + ++ P++ EG V C+P P +
Sbjct: 107 VATNARGTVVSREASLRFGFLQEFSAEERDPVK----ITEGWGVMFTCSPPPHYPALSYR 162
Query: 123 WKKDG--NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATN----VHGMDESKGRLI 175
W + N I + GRR + + GNL I+ D G YSC AT+ + SK +
Sbjct: 163 WLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQL 222
Query: 176 VL-------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228
L + PS + P + + L C A + + + L
Sbjct: 223 SLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKW-----------RKL 271
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ +T LL I N F D G YEC ++ G+ + + +I+ P
Sbjct: 272 DGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQP 322
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 178/488 (36%), Gaps = 37/488 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ P T W + ELL + + D I N+ + D Y C A+N
Sbjct: 435 CQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNI-------SKSDEGKYTCFAEN 487
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK--FVWKKDGN 128
+ S+ +L+++ + K S G N+T+ C+ P F W D
Sbjct: 488 FMGKANSTG---ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDDF 544
Query: 129 II------GSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
I G R + E G+L I SG Y+CTA V +D + +
Sbjct: 545 PIDLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTV--VDSTSESATLTVRGP 602
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ +QL S + +A + N ++ T +NI+G
Sbjct: 603 PGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSN-KWKQMRTNPVNIEGN 661
Query: 242 LLEITNASFADAGEYECVVKST----VGKISTKTTVIV---EGPPGLPGGVQVVEVHKTS 294
+ +YE V ++ VG+ S ++ I P P G+
Sbjct: 662 AETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNE 721
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
I WT + + + I T ++ V E Y R E+ + P+
Sbjct: 722 LIINWTPTLRDYQNGDGFGYILSFRKKGTQGWLTARVPHAESLHYVYRNES-----IGPY 776
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+ +E K+ A N G G P S + + ++P AP R+ ++ +SWEP+ +
Sbjct: 777 TPFEVKIKAYNRKGEG-PESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGD 835
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
+ Y+I + K D E ++ ++ G V A + T+Y V V+A N G G
Sbjct: 836 MTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSA--HVTGLNPNTKYHVSVRAYNRAGAG 893
Query: 475 PESEVVTI 482
P S I
Sbjct: 894 PPSPSTNI 901
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 84/212 (39%), Gaps = 38/212 (17%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG---NVTIFCNPEAAPKPKFVWKKDGNIIGS 132
+ AQ + + P F+++P + T EG VT+ C A P + WK +G +
Sbjct: 20 WCQAQSGMRSYGPVFEEQP--AHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKM 77
Query: 133 G-GRRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLP 187
G R G+L+IS PV D+G Y C ATN G E+ R L S E+ P
Sbjct: 78 GPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDP 137
Query: 188 PKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG---- 240
KIT + CS H L +Y W N E PN I DG
Sbjct: 138 VKIT--EGWGVMFTCSPPPHYPAL---SYRWLLN------------EFPNFIPADGRRFV 180
Query: 241 ----GLLEITNASFADAGEYECVVKSTVGKIS 268
G L I +D G Y C S + I+
Sbjct: 181 SQTTGNLYIAKTEASDLGNYSCFATSHIDFIT 212
>sp|Q02246|CNTN2_HUMAN Contactin-2 OS=Homo sapiens GN=CNTN2 PE=1 SV=1
Length = 1040
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 233/483 (48%), Gaps = 16/483 (3%)
Query: 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDP 61
D ++L W C A G P T W RNGE PL Q+R + L L+ E D
Sbjct: 339 DIGSNLRWGCAAAGKPRPTVRWLRNGE-------PLASQNRVEVLAGDLRFSKLSLE-DS 390
Query: 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121
MYQC A+N+ T Y+SA+L V L P F+ P+ A GG + I C P AAPK
Sbjct: 391 GMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEILIPCQPRAAPKAVV 450
Query: 122 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+W K I+ + R + +G L+I +SR D G Y+C A N G S G ++ + +
Sbjct: 451 LWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTG-ILSVRDAT 509
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDG 240
P I NL L+C A + +D+ + WT + I + N+
Sbjct: 510 KITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDDFPIDFDKPGGHYRRTNVKETI 569
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
G L I NA G+Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+
Sbjct: 570 GDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRDIGDTTIQLSWS 629
Query: 301 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360
G N PI Y + ART W V + E G E + L PW YEF+
Sbjct: 630 RGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE-----GNAETAQVLGLTPWMDYEFR 684
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
VIA N LG GEPS PS + T P APS + GGGG G+L ++W P+ RE QN
Sbjct: 685 VIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMSREYQNGDGF 744
Query: 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y + +R++ T +Q+ + + V S YT +EVK+++ N G GPES
Sbjct: 745 GYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTA 803
Query: 481 TIW 483
++
Sbjct: 804 LVY 806
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 111/273 (40%), Gaps = 32/273 (11%)
Query: 17 PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNV--LTIRYLNPERDPAMYQCRAKNQL-- 72
P ++Y W LLN + R+F+ L I N D Y C A + +
Sbjct: 162 PGLSYRW-----LLNEFPNFIPTDGRHFVSQTTGNLYIARTNAS-DLGNYSCLATSHMDF 215
Query: 73 --KTRYSS-AQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
K+ +S AQL + PS K R +ETYA G VT+ C P P+ W+
Sbjct: 216 STKSVFSKFAQLNLAAEDTRLFAPSIKAR-FPAETYALVGQQVTLECFAFGNPVPRIKWR 274
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
K + GS + L I VS +D G Y C A N G D +GR+IV P + +
Sbjct: 275 K---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLK 331
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
+ NL+ C+A + V W NG + + + + + G L
Sbjct: 332 VI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRNGEPLASQN-------RVEVLAGDLR 381
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277
+ S D+G Y+CV ++ G I + V+
Sbjct: 382 FSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 110/286 (38%), Gaps = 36/286 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A P TY W NG + LE R+ + L I +D +YQC A N
Sbjct: 61 CRARASPPATYRWKMNGTEMK-----LEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVW--KKDG 127
+ T S + F K + A EG V + CNP A P + W +
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP-VKAHEGWGVMLPCNPPAHYPGLSYRWLLNEFP 174
Query: 128 NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---------- 176
N I + GR + + GNL I+ + D G YSC AT+ MD S +
Sbjct: 175 NFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--HMDFSTKSVFSKFAQLNLAAE 232
Query: 177 ---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
L PS + P + + + L C A + RI ++ +
Sbjct: 233 DTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPV-----------PRIKWRKVDGSLS 281
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
P L+I + SF D G YEC +++ G+ + + +IV+ P
Sbjct: 282 PQWTTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRIIVQAQP 327
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 780 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPV-Q 837
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 838 QDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 895
Query: 473 PGPES 477
GP S
Sbjct: 896 TGPAS 900
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 41/216 (18%)
Query: 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGG--NVTIFCNPEAAPKPKFVWKKDGNIIG-S 132
+SSA T P F+ +PL S + E V + C A+P + WK +G +
Sbjct: 25 WSSALGSQTTFGPVFEDQPL-SVLFPEESTEEQVLLACRARASPPATYRWKMNGTEMKLE 83
Query: 133 GGRRKIFENGNLLI-SPVSRDDSGIYSCTATNVHGM---DESKGRLIVLHGPSYYEQLPP 188
G R GNL+I +P D+G+Y C A+N G E+ R L S E+ P
Sbjct: 84 PGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNPVGTVVSREAILRFGFLQEFSKEERDP- 142
Query: 189 KITIAAHR--NLQLRCS--AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDG--- 240
+ AH + L C+ AH L +Y W N E PN I DG
Sbjct: 143 ---VKAHEGWGVMLPCNPPAHYPGL---SYRWLLN------------EFPNFIPTDGRHF 184
Query: 241 -----GLLEITNASFADAGEYECVVKSTVGKISTKT 271
G L I + +D G Y C+ S + STK+
Sbjct: 185 VSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>sp|Q8AXZ4|CNT1A_DANRE Contactin-1a OS=Danio rerio GN=cntn1a PE=2 SV=1
Length = 1032
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 228/488 (46%), Gaps = 27/488 (5%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D D +C+A G P + +NG + +++ + + L E D
Sbjct: 351 VDIGGDYIMSCQASGKPKPHVHFLKNGHM--------------YMKGHEVRFSRLGFE-D 395
Query: 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120
MYQC A+N+ +++A+LRV PSF+ P++ + G V C P AAP+P
Sbjct: 396 SGMYQCVAENRHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPN 455
Query: 121 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
W K ++ + R I+ +G+L + +S+ D G Y+C A N G S G L +
Sbjct: 456 ITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFAENDRGRANSTGSLSITDA- 514
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINID 239
+ P ++ + ++ C A + LD+ +IW+ +G I D + +
Sbjct: 515 TKITLAPSNADVSVGEDARMECVASHDPGLDLTFIWSLDGHTINLQRDAQHYQRKMDSAS 574
Query: 240 G---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L IT+ AG Y C ++ V + ++V GPPG PGGV+V EV S
Sbjct: 575 GTSSSELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPGPPGGVRVDEVTSDSVR 634
Query: 297 IQWTDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ W+ G N PI+ Y + R + W + + + E G E + L+PW+
Sbjct: 635 VLWSHGTDNLSPISRYTVQLRESAAQQDWRDAATSPVNVE-----GNAEMATVVNLLPWT 689
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
YEF+VIA N LG G PS PSP+ T +P APS IGGGGG +L+I+W P+ +
Sbjct: 690 EYEFRVIATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGTSRELTITWTPVQSQYY 749
Query: 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
N Y I ++ ND E+ T+ + V + P T +EVK++A N G GP
Sbjct: 750 YGSNFGYIIAFKPHNDPEWLRVTVTD-PEAQKYVHKDPKIPPSTRFEVKMKAFNSQGEGP 808
Query: 476 ESEVVTIW 483
S I+
Sbjct: 809 FSNSAFIY 816
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 125/331 (37%), Gaps = 48/331 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNPERDPAMYQ 65
+T TC P +Y W N N+E + E D Y + + L I + + Y
Sbjct: 66 ITLTCRTRANPPASYRWRLN----NAELVLAEGSDPHYSVSEGNLLISSPDKSKHAGNYT 121
Query: 66 CRAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
C A NQ + +R + Q L + + ++ + Y EG + C AP P F
Sbjct: 122 CVASNQYGSVTSRRARVQFGYLDMFSTDEREAV----YVKEGQGAVLLC----APPPHFP 173
Query: 122 -------VWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
+ + I RR + ++ GNL IS V DSG YSC ++ +
Sbjct: 174 EDLSFRWMLNEFPEFIPLDQRRFVSQSTGNLYISTVRSTDSGNYSCFVSSPAIAKSVFSK 233
Query: 174 LIVLH--GPSYYEQLPPKITIAA-------HRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224
I L + P I + + +N+ L C A + + +
Sbjct: 234 FIPLVPIAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNPIPQIRW---------- 283
Query: 225 NMDLNELETP---NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281
L+ + P ++++ G LL + + + D G YEC ++ GK KT + VEG P
Sbjct: 284 -RKLDGVLPPLRHDVSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHLYVEGAPDW 342
Query: 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHY 312
+ EV I + +P H+
Sbjct: 343 LEQISSSEVDIGGDYIMSCQASGKPKPHVHF 373
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 38/270 (14%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDN----VLTIRYLNPERDPAMYQCRAKNQL- 72
D+++ W N E +PL DQ R+ Q + T+R D Y C +
Sbjct: 175 DLSFRWMLNE---FPEFIPL-DQRRFVSQSTGNLYISTVR----STDSGNYSCFVSSPAI 226
Query: 73 -KTRYSSAQLRVLTLKPSFKKRPLE-----SETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
K+ +S V + S +K P + +++A G NVT+ C P P+ W+K
Sbjct: 227 AKSVFSKFIPLVPIAERSLRKYPADIKVKSPDSWALLGQNVTLECFALGNPIPQIRWRKL 286
Query: 127 GNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
++ R + +G LL + + +D G+Y C A N G D K L V P + EQ
Sbjct: 287 DGVLPPL-RHDVSMSGALLHLYSLQYEDEGLYECEADNSKGKDWHKTHLYVEGAPDWLEQ 345
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
+ + +E + YI + ++ L+ ++ + G +
Sbjct: 346 I-----------------SSSEVDIGGDYIMSCQASGKPKPHVHFLKNGHMYMKGHEVRF 388
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIV 275
+ F D+G Y+CV ++ G I + V
Sbjct: 389 SRLGFEDSGMYQCVAENRHGVIHANAELRV 418
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 15/184 (8%)
Query: 88 PSFKKRPLESETYAGEG--GNVTIFCNPEAAPKPKFVWKKDGNII----GSGGRRKIFEN 141
P F+++PL++ Y E +T+ C A P + W+ + + GS + E
Sbjct: 46 PVFEEQPLDT-IYPEESPEEKITLTCRTRANPPASYRWRLNNAELVLAEGSDPHYSVSE- 103
Query: 142 GNLLIS-PVSRDDSGIYSCTATNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 199
GNLLIS P +G Y+C A+N +G + + R+ + + + + +
Sbjct: 104 GNLLISSPDKSKHAGNYTCVASNQYGSVTSRRARVQFGYLDMFSTDEREAVYVKEGQGAV 163
Query: 200 LRCSAHTEELLDVAYIWTHNGV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 258
L C+ D+++ W N +D ++ G L I+ D+G Y C
Sbjct: 164 LLCAPPPHFPEDLSFRWMLNEFPEFIPLDQRRF----VSQSTGNLYISTVRSTDSGNYSC 219
Query: 259 VVKS 262
V S
Sbjct: 220 FVSS 223
>sp|P20241|NRG_DROME Neuroglian OS=Drosophila melanogaster GN=Nrg PE=1 SV=2
Length = 1302
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 30/470 (6%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPER-DPAMY 64
++ + C A GVP+ SW NG+ + T R + DN TIR +N + D Y
Sbjct: 355 EVVFECRAAGVPEPKISWIHNGKPIEQST----PNPRRTVTDN--TIRIINLVKGDTGNY 408
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
C A N L Y L V P+ + P T +G NVTI C +PKP W
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWL 466
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
+ N + +GGR + NG+L I V+ D+G Y+C A N G ++ G L+V +
Sbjct: 467 RASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEH-TRIT 524
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244
Q P +AA ++ RC+ ++ L++ W +G I D E + + + L
Sbjct: 525 QEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSI---DF-EAQPRFVKTNDNSLT 580
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT 304
I D+GEY CV ++ + + + + +IV+ P P + + A I W
Sbjct: 581 IAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPK-LTGITCQADKAEIHWEQQGD 639
Query: 305 NGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
N PI HY I T++ ++W E V ++S + PW+ Y F+VIA
Sbjct: 640 NRSPILHYTIQFNTSFTPASWDAAYEKV---------PNTDSSFVVQMSPWANYTFRVIA 690
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G PS+ S T D P++ P + G G + +L ISW P+P + NAPN +Y
Sbjct: 691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYY 750
Query: 424 IFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ W++ +++ + ++ I + P+ + +Y +KV AIND G
Sbjct: 751 VSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVKYLIKVVAINDRG 797
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 117/286 (40%), Gaps = 33/286 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNP-ERDPAMYQCRAK 69
CEA G P+ YSW +NG+ + + +R Q T+ P + D YQC A
Sbjct: 59 CEADGQPEPEYSWIKNGKKFDWQAY----DNRMLRQPGRGTLVITIPKDEDRGHYQCFAS 114
Query: 70 NQLKTRYS-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFC-NPEAAPKPKFVWKKDG 127
N+ T S S +R L +FK ++ A EG + C P+ P P W
Sbjct: 115 NEFGTATSNSVYVRKAELN-AFKDEAAKT-LEAVEGEPFMLKCAAPDGFPSPTVNWMIQE 172
Query: 128 NIIGS-----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDESKGRLIVLH- 178
+I GS R + GNL S V+R+D+ Y+C+AT+V + G ++L
Sbjct: 173 SIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV 232
Query: 179 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-------AYIWTHNGVRIGNMDL 228
G S + P + R L EL + +W+ +G RI D
Sbjct: 233 KQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD- 291
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274
+ + G L I +F DAG Y C V + VG + + ++
Sbjct: 292 -RITQGHY---GKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIIL 333
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 107/275 (38%), Gaps = 31/275 (11%)
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCN 112
Y C A + ++ Y +L +K P ++ ++ A G + +FC
Sbjct: 210 YACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCI 269
Query: 113 PEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESK 171
P P+ VW KDG I R G +L+I + DD+G Y+C +N G +S
Sbjct: 270 YGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSF 329
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
++ ++ Y+ + P T A + C A + + W HNG I E
Sbjct: 330 SIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHNGKPI------EQ 381
Query: 232 ETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGL---PGGV 285
TPN + + I N D G Y C +++G + + V+ PP + P V
Sbjct: 382 STPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAV 441
Query: 286 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 320
V+ + + NG P K + +NW
Sbjct: 442 STVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
>sp|O00533|CHL1_HUMAN Neural cell adhesion molecule L1-like protein OS=Homo sapiens
GN=CHL1 PE=1 SV=4
Length = 1208
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 218/480 (45%), Gaps = 35/480 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG +++ D F ++ ++ L P A+YQC A N
Sbjct: 352 CEAEGEPQPTIKWRVNGSPVDNHPFA---GDVVFPRE--ISFTNLQPNHT-AVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWKKDGNI 129
T ++A + V+ ++P + + + E YA G + + C A+P+ W+K +
Sbjct: 406 VHGTILANANIDVVDVRPLIQTK--DGENYATVVGYSAFLHCEFFASPEAVVSWQKVEEV 463
Query: 130 IGSGGRR-KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
GRR I+ENG L I+ + +D+G YSC N G L + + + P
Sbjct: 464 KPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDGEA---FEINGTEDGRIIIDGANLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C + + + T V V P P + + E S + W GA +
Sbjct: 580 NVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDPPENLHLSERQNRSVRLTWEAGADHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G+K I L P+ Y+F+VIA
Sbjct: 640 SNISEYIVEFEGNKEEPGRW---------EELTRVQGKKTTVILP-LAPFVRYQFRVIAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G +PS PS + TP P + P I + ++ I WEPL +QN P + Y++
Sbjct: 690 NEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYRV 749
Query: 425 FWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E++ ET+ + +R+ + Y Y+VKVQAIN +G GP+ + VT++
Sbjct: 750 TWKPQGAPVEWEEETVTNH------TLRVMTPAVYAPYDVKVQAINQLGSGPDPQSVTLY 803
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 190/495 (38%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P+ SW + E PLE + + ++ L I E D Y C +N
Sbjct: 445 CEFFASPEAVVSWQKV-----EEVKPLEGRRYHIYENGTLQINRTT-EEDAGSYSCWVEN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
+ +A L + L + P K P + + E + C+ K W K
Sbjct: 499 AIGKTAVTANLDIRNATKLRVSP---KNPRIPKLHMLEL-HCESKCDSHLKHSLKLSWSK 554
Query: 126 DGN---IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
DG I G+ R I + NL IS V+ +D GIY C+A ++ VL P
Sbjct: 555 DGEAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPDP 614
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVA-YIWTHNGVRIGNMDLNELETPNINIDGG 241
E L ++ +R+++L A + +++ YI G + EL
Sbjct: 615 PENL--HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTV 672
Query: 242 LLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPG----GVQVVEVHKTSAT 296
+L + A F ++ + + VG+ ++ + E PP P ++V
Sbjct: 673 ILPL--APFVRY-QFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMI 729
Query: 297 IQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLV 352
I+W P Y++ TW V +E V +T R V+
Sbjct: 730 IKWEPLKSMEQNGPGLEYRV--------TWKPQGAPVEWEEETVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAPSRIGGGGGKIGDLSISW 407
P ++ Y+ KV A N+LG G P PQ T D P AP G + ++W
Sbjct: 775 PAVYAPYDVKVQAINQLGSG----PDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTW 830
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEYEV 463
+P+++ + Y+I W K KE + + R +PS ++E+ +
Sbjct: 831 STVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHL 890
Query: 464 KVQAINDVGPGPESE 478
V A N G GPESE
Sbjct: 891 TVLAYNSKGAGPESE 905
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 111/294 (37%), Gaps = 44/294 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ T+SW ++G P D I +N T R N Y+C
Sbjct: 57 CEAKGNPEPTFSWTKDGN-------PFYFTDHRIIPSNNSGTFRIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
A N+L S ++ P F K PLE E EG + + CNP P ++
Sbjct: 110 FASNKLGIAMSEEIEFIVPSVPKFPKEKIDPLEVE----EGDPIVLPCNPPKGLPPLHIY 165
Query: 124 KKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLH 178
+ + I R + + G+L + V DS Y C A + + + + ++
Sbjct: 166 WMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCCFAAFPRLRTIVQKMPMKLTVN 225
Query: 179 GPSYYEQLPPK-------------ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+ +Q PK ITI L L C A E L W G G+
Sbjct: 226 SSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA--EGLPTPQVDWNKIG---GD 280
Query: 226 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N G L+I N S+ D G Y C + +G + VIVE PP
Sbjct: 281 LPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFLGTATHDFHVIVEEPP 331
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 63/172 (36%), Gaps = 18/172 (10%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAG----EGGNVTIFCNP 113
++ P + N +K R KP P ES + + +G + + C
Sbjct: 216 QKMPMKLTVNSSNSIKQR-----------KPKLLLPPTESGSESSITILKGEILLLECFA 264
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173
E P P+ W K G + G K L I VS D G Y CTA+N G
Sbjct: 265 EGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATHDFH 324
Query: 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225
+IV P + ++ P + N L C A E + W NG + N
Sbjct: 325 VIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPVDN 373
>sp|P70232|CHL1_MOUSE Neural cell adhesion molecule L1-like protein OS=Mus musculus
GN=Chl1 PE=1 SV=2
Length = 1209
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 206/479 (43%), Gaps = 33/479 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CEA G P T W NG + P + F+ ++ L P +YQC A N
Sbjct: 352 CEAEGEPQPTIKWRLNGLPIEKHPFPGD-----FMFPREISFTNLLPNHT-GVYQCEASN 405
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVWK-KDGN 128
T ++A + V+ + P K + E YA G + + C A+PK VW+ D
Sbjct: 406 IHGTILANANIDVIDVIPLIKTK--NEENYATVVGYSAFLHCEYFASPKATVVWEVADET 463
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
G R ENG L I + +D+G YSC N G L + + + P
Sbjct: 464 HPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVDNAMGKAVITANLDIRNA-TKLRVSPK 522
Query: 189 KITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
I L+L C + + L + W+ +G ++N E I IDG L I+
Sbjct: 523 NPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDGEA---FEMNGTEDGRIVIDGAYLTIS 579
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 306
N + D G Y C ++++ S KT V V G P PG + + E S + W G +
Sbjct: 580 NITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPDPPGNLHLSERQNRSVRLSWEAGDDHN 639
Query: 307 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
I+ Y + N W +E+ R G +E + L P+ Y+F+V A
Sbjct: 640 SKISEYIVEFEGNREEPGKW---------EELTRVQG-EETDVVLSLAPYVRYQFRVTAV 689
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G S PS + TP P + P I + ++ I WEPL +QN P + YK+
Sbjct: 690 NEVGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPGLEYKV 749
Query: 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
W+ + E E + V +R+ + Y Y+VKVQAIN +G P+ + VT++
Sbjct: 750 SWKPQGAPEEWEEEI-----VTNHTLRVMTPTVYAPYDVKVQAINQLGSSPDPQPVTLY 803
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 179/497 (36%), Gaps = 65/497 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE F P T W + ET PLE DRY +N Y E D Y C N
Sbjct: 445 CEYFASPKATVVW-----EVADETHPLEG-DRYHTHENGTLEIYRTTEEDAGSYSCWVDN 498
Query: 71 QLKTRYSSAQLRV-----LTLKPSFKKRPLES--ETYAGEGGNVTIFCNPEAAPKPKFVW 123
+ +A L + L + P + P E Y C+ K W
Sbjct: 499 AMGKAVITANLDIRNATKLRVSPKNPRIPKSHVLELYCESQ------CDSHLKHSLKLSW 552
Query: 124 KKDGNII---GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
KDG G+ R + + L IS ++ +D G+YSC+A K ++ VL P
Sbjct: 553 SKDGEAFEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVP 612
Query: 181 SYYEQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGN-MDLNELETP 234
P + ++ +N +R S H ++ + + N G +L ++
Sbjct: 613 D----PPGNLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKWEELTRVQGE 668
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
++ L F E V +S S P P ++V
Sbjct: 669 ETDVVLSLAPYVRYQFRVTAVNE-VGRSHASLPSDHHETPPAAPDKNPQNIRVQASQPKE 727
Query: 295 ATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
I+W P YK+ +W E + V +T R V+
Sbjct: 728 MIIKWEPLKSMEQNGPGLEYKV----SWKPQ--GAPEEWEEEIVTNHTLR-------VMT 774
Query: 353 P--WSTYEFKVIAGNELGYGEPSSPSPQYNT---PADKPYQAP--SRIGGGGGKIGDLSI 405
P ++ Y+ KV A N+LG SSP PQ T D P AP R+ + + +
Sbjct: 775 PTVYAPYDVKVQAINQLG----SSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTL--VKV 828
Query: 406 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR----IPSEFYYTEY 461
+W +P+E + Y+I W K KE + + R +PS ++E+
Sbjct: 829 TWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEF 888
Query: 462 EVKVQAINDVGPGPESE 478
+ V A N G GPESE
Sbjct: 889 HLTVLAYNSKGAGPESE 905
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 113/292 (38%), Gaps = 40/292 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD-RYFIQDNVLTIRYLNP---ERDPAMYQC 66
CEA G P+ +SW ++ + P + D R +N T + N Y+C
Sbjct: 57 CEAKGNPEPIFSWTKDDK-------PFDLSDPRIIAANNSGTFKIPNEGHISHFQGKYRC 109
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
A N+L T S ++ P F K +E EG ++ + CNP P ++ +
Sbjct: 110 FASNRLGTAVSEEIEFIVPGVPKFPKEKIEP-IDVEEGDSIVLPCNPPKGLPPLHIYWMN 168
Query: 127 GNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSCTAT--NVHGMDESKGRLIVLHGPS 181
+ I R + + G+L + V +DS Y C A + + + + ++ +
Sbjct: 169 IELEHIEQDERVYMSQRGDLYFANVEENDSRNDYCCFAAFPKLRTIVQKMPMKLTVNSSN 228
Query: 182 YYEQLPPKI-------------TIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMD 227
+Q PK+ T+ L L C A E L +I W+ G +
Sbjct: 229 SIKQRKPKLLLPPAQMGSLSAKTVLKGDTLLLECFA---EGLPTPHIQWSKPGSELPEG- 284
Query: 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
I + L+I N S+ D G Y C + +GK S V VE PP
Sbjct: 285 -----RATIEVHEKTLKIENISYQDRGNYRCTANNLLGKASHDFHVTVEEPP 331
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 61/173 (35%), Gaps = 8/173 (4%)
Query: 103 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162
+G + + C E P P W K G+ + G L I +S D G Y CTA
Sbjct: 254 KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTAN 313
Query: 163 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222
N+ G S + + P +++ P + + L C A E + W NG+
Sbjct: 314 NLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLP 370
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
I P + + TN G Y+C + G I + V
Sbjct: 371 IEKHPF-----PGDFMFPREISFTNLLPNHTGVYQCEASNIHGTILANANIDV 418
>sp|Q58EX2|SDK2_HUMAN Protein sidekick-2 OS=Homo sapiens GN=SDK2 PE=1 SV=3
Length = 2172
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 210/483 (43%), Gaps = 37/483 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP + +W+++ ++ E L Q D L I L P+ D M+QC A+N
Sbjct: 330 CQAKGVPPPSITWYKDAAVVEVEKLTRFRQR----NDGGLQISGLVPD-DTGMFQCFARN 384
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 385 AAGEVQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 442
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 443 ASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 501
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLEI 245
P ++ + C + + + YIW +G +G P I +D G L I
Sbjct: 502 PQDQSVIKGTQASMVCGVTHDPRVTIRYIWEKDGATLGTES-----HPRIRLDRNGSLHI 556
Query: 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGA 303
+ D G Y C V S G S + V P P + V + + + WT
Sbjct: 557 SQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPF 616
Query: 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 363
P+ Y I+ + N+ W V+ VD + + LVP +Y+F++ A
Sbjct: 617 DGNSPLIRY-ILEMSENNAPW-----TVLLASVD---PKATSVTVKGLVPARSYQFRLCA 667
Query: 364 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 423
N++G G+ S + + + P + P P + G + I W+P P QN Y
Sbjct: 668 VNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILKGYI 727
Query: 424 IFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
I + +F++ T + N+ + + I +T YE++V A N G G S V
Sbjct: 728 IRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYSSKV 782
Query: 481 TIW 483
T W
Sbjct: 783 TEW 785
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 177/489 (36%), Gaps = 50/489 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L +++ +++ D Y C A N
Sbjct: 423 CETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHIS---DAGTYTCLATN 479
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128
+SA L V+ + K P + +G ++ C P+ +++W+KDG
Sbjct: 480 SRGVDEASADL-VVWARTRITKPPQDQSVI--KGTQASMVCGVTHDPRVTIRYIWEKDGA 536
Query: 129 IIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
+G S R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 537 TLGTESHPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQLPHAPEHP 596
Query: 187 PPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGG 241
++ R + L + + + YI ++++E P ++D
Sbjct: 597 VATLSTVERRAINLTWTKPFDGNSPLIRYI----------LEMSENNAPWTVLLASVDPK 646
Query: 242 LLEITNASFADAGEYE---CVV----KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+T A Y+ C V K K + + ++ E P P V S
Sbjct: 647 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQS 706
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL-- 351
IQW P +H I + + + + G V ++ +A + N+L
Sbjct: 707 IMIQW-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLE 755
Query: 352 --VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
+ W+ YE +V A N G G SS ++ T P P + + +W
Sbjct: 756 DLIIWTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 410 LPREKQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
+ N N YK I W + + E T + I V + +TEY V
Sbjct: 815 PSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCF 874
Query: 469 NDVGPGPES 477
G GP S
Sbjct: 875 TTPGDGPRS 883
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 136/379 (35%), Gaps = 52/379 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 44 LVLTCMAEGSWPLEFKWLHNNRELTKFSL----EYRYMITSLDRT--------HAGFYRC 91
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF++ GE + P A P+P+ W
Sbjct: 92 IVRNRMGALLQRQTEVQVAYMGSFEEGEKHQSVSHGEAA---VIRAPRIASFPQPQVTWF 148
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 149 RDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGG 208
Query: 180 PSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ I +A + L C A+ L+ + IW +GV L +
Sbjct: 209 PADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLS 259
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
I+ L I N + +DAG YEC + S+V + + V PP V+ E
Sbjct: 260 GGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPER 316
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V +++ R+ R + ++ +
Sbjct: 317 HITAEMEKVVDIPCQAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRNDGGLQIS 368
Query: 350 VLVPWSTYEFKVIAGNELG 368
LVP T F+ A N G
Sbjct: 369 GLVPDDTGMFQCFARNAAG 387
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 33/262 (12%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 458
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1168
Query: 459 TEYEVKVQAINDVGPGPESEVV 480
TEY V+VQA N +G GP S+ V
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQTV 1190
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 474 GPES 477
GP S
Sbjct: 1709 GPRS 1712
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSS 1611
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N + E V+ +
Sbjct: 1301 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE-VLAPSARQ 1359
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P S Y F++ A G+GE + D+P Q PSR +
Sbjct: 1360 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSRPMVQQE 1411
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWE P +P YY I R+ + + N +V F
Sbjct: 1412 DVRARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASSFIVDRLKPF 1469
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1470 --TSYKFRVKATNDIG 1483
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1261 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1289
>sp|Q8AV57|SDK2_CHICK Protein sidekick-2 OS=Gallus gallus GN=SDK2 PE=2 SV=2
Length = 2177
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 205/482 (42%), Gaps = 35/482 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
C+A GVP +W+++ L++ E L R+ + D L I L P+ D M+QC A+
Sbjct: 335 CQAKGVPPPDMAWYKDASLIHPEQL-----SRFQLLADGSLQISGLLPD-DTGMFQCFAR 388
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI 129
N ++ L V ++ P+ + P +S +G +V + C AP+P W+K I
Sbjct: 389 NAAGEVQTTTYLAVTSIAPNITRGPQDSTVI--DGMSVILNCETSGAPRPAITWQKGERI 446
Query: 130 IGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ SG R + E+G+LL+SP D+G Y+C ATN G+DE+ L+V +
Sbjct: 447 LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVVW-ARTRITD 505
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-GGLLE 244
P ++ + C + +DV YIW +G +G P + +D G L
Sbjct: 506 PPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEKDGAPLGTES-----GPRLRLDETGTLH 560
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P V + K + + W
Sbjct: 561 ISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQLPHAPESPVAVLSPLEKRAINLTWAKP 620
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
P+ Y + N N+ W V + E+ R LVP +Y+F++
Sbjct: 621 FDGNSPLLRYLVEISEN-NAPW-TVLLASVDPELTWVVVRG-------LVPARSYQFRLC 671
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N++G + S + + + P + P+ P + G + I W+P P QN Y
Sbjct: 672 AVNDVGRSQFSKDTERVSLPEEPPFAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLKGY 731
Query: 423 KI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
I + +Q K N + + + +T YE++V A N G G S VT
Sbjct: 732 IIRYCLAGLPVGYQ---FKNITNADVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSMKVT 788
Query: 482 IW 483
W
Sbjct: 789 EW 790
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 96/238 (40%), Gaps = 14/238 (5%)
Query: 45 IQDNVLTIRYLNPER-DPAMYQCRA---KNQLKTRYSSAQLRVLTLKPSFKKRPLESETY 100
I D + LNP D Y+C A + + A L VL P F K P E
Sbjct: 267 ISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLE-PPQFVKEP-ERHIT 324
Query: 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYS 158
A V I C + P P W KD ++I R ++ +G+L IS + DD+G++
Sbjct: 325 AEMEKVVAIPCQAKGVPPPDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQ 384
Query: 159 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
C A N G ++ L V + P T+ ++ L C T A W
Sbjct: 385 CFARNAAGEVQTTTYLAVTSIAPNITRGPQDSTVIDGMSVILNC--ETSGAPRPAITW-Q 441
Query: 219 NGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
G RI + ++ P ++ G L ++ A DAG Y C+ ++ G ++V
Sbjct: 442 KGERI--LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVV 497
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 105/289 (36%), Gaps = 40/289 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 49 LVLTCMAEGSWPLEFKWLHNSRELTKFSL----EYRYMITSLDRT--------HAGFYRC 96
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWK 124
+N++ + SF+ + GE + P A P+P+ W
Sbjct: 97 IVRNRMGALLQRQTEVQVAYMGSFEDSETQQSVSHGEAA---VIRAPRIASFPQPQVTWF 153
Query: 125 KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----G 179
+DG I R I L+I D+G Y A N D + I L G
Sbjct: 154 RDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVANVGG 213
Query: 180 PSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233
P+ +PP+ T +A + + C A+ L+ + IW +GV I +
Sbjct: 214 PADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPISS-------- 265
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 279
I+ L I N + D+G YEC + S+V ++ + V PP
Sbjct: 266 -GISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVAEGAYLSVLEPP 313
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + ++ TI WT G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1838 ISRYGSAITIHWTSGDPGQGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMDILK 1896
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ V +Y+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1897 QGV-----SYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1931
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G PS P + A P AP + L ++WEP P E QN
Sbjct: 1600 YEIRMSVYNAVGEGPPSPPQEVFVGEA-MPTGAPQNVAVKAATATQLDVTWEPPPTESQN 1658
Query: 417 APNIYYKI-FW---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
YKI FW R+ ++ L E G V++ + YT Y V + A N G
Sbjct: 1659 GDIQGYKIHFWEAQRQNESARVKTLFLPETG------VKLKNLTGYTSYWVSIAAFNAAG 1712
Query: 473 PGPESEVVT 481
GP S VT
Sbjct: 1713 DGPRSTPVT 1721
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 37/264 (14%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ ++ I G PP LPG + +
Sbjct: 952 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSSSTISSGVPPELPGAPTNLGISN 1008
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNWN---STWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ +++ A+ N W V H + E D +
Sbjct: 1009 IGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLV--HQLANEPDA----RSLE 1062
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ N L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1063 VPN-LNPYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRTASETSLWLR 1121
Query: 407 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV--RIPSEFY----- 457
W PL ++ N ++ Y+I + + + G + V+ R+ E+
Sbjct: 1122 WMPLLEQEYNGNPDSVGYRIRYLRSDGQ----------GRAVVHVIHDRVEREYTIEDLE 1171
Query: 458 -YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S +V
Sbjct: 1172 EWTEYRVQVQAFNAIGSGPWSHLV 1195
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W I Y++ R N + VSE V+G +
Sbjct: 1306 PGPPVGMLFPEVRTTSVRLIWQPPTAPNGIILAYQLTHRLNTTTANAAVSE-VLGPSTRQ 1364
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
YT L P +TY F + A G+GE + D+P Q PS+ +
Sbjct: 1365 YTATG-------LQPEATYLFSITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPLVRQE 1416
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
+ + +SWEP +P +Y + R+ E+ N VV F
Sbjct: 1417 DVRARSVLLSWEP--GSDGLSPVRFYTVQTRELPSGEWALHPASISHNATAFVVDRLKPF 1474
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1475 --TSYKFRVKATNDIG 1488
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P V+ +V S + W G+ P+ Y + R + W ++S +
Sbjct: 1407 PPSKPL-VRQEDVRARSVLLSWEPGSDGLSPVRFYTVQTRELPSGEWALHPASISHNATA 1465
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1466 FVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESESLTTLQAAPEEAPTIL 1513
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG------- 446
+ I W+P +K N + +++ +R+ + TL GN G
Sbjct: 1514 SVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYRELLYDSLRGFTLHGIGNPGATWAELT 1573
Query: 447 -IAVVRIPSEFYYTE-----------YEVKVQAINDVGPGPES 477
+ V SE T+ YE+++ N VG GP S
Sbjct: 1574 PVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVYNAVGEGPPS 1616
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 24/253 (9%)
Query: 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGV 285
D LE PN+N T SF +V ++ + ++ ++ PP + P V
Sbjct: 1057 DARSLEVPNLN------PYTYYSFR--MRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANV 1108
Query: 286 QVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 341
+ +TS ++W + NG P + Y+I R + HVI V+R
Sbjct: 1109 TLRTASETSLWLRWMPLLEQEYNGNPDSVGYRI--RYLRSDGQGRAVVHVIHDRVER--- 1163
Query: 342 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E +IE+ L W+ Y +V A N +G G P S T P PS +
Sbjct: 1164 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHLVLGRTRESVPSSGPSNVSAQATSSS 1219
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
++ + W +P N + YK+ +++K D+E +++ GN + ++ + Y
Sbjct: 1220 NMLVRWSDIPEADCNGLILGYKVMFKEK-DSEARAQFWLAEGNTSRS-AQLTGLGKFMLY 1277
Query: 462 EVKVQAINDVGPG 474
E++V A +G G
Sbjct: 1278 EIRVLAFTRIGDG 1290
>sp|Q810U3|NFASC_MOUSE Neurofascin OS=Mus musculus GN=Nfasc PE=1 SV=1
Length = 1240
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 216/499 (43%), Gaps = 69/499 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NGE L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
N+ ++A + VL + P S + + + Y + C +P P W
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLSARNQLIRVILY----NRTRLDCPFFGSPIPTLRW 464
Query: 124 KKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P
Sbjct: 465 FKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDP 521
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINI 238
+ ++P +QL C + L + W + + IGN E ++
Sbjct: 522 TRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS----- 576
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPG 283
L I + D G Y C+ + + + K + V +G P P
Sbjct: 577 ----LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPR 632
Query: 284 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
+++ ++ + S + W G N PIT Y + + F + + R+ G
Sbjct: 633 DLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSV 685
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++
Sbjct: 686 NSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNM 744
Query: 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEY 461
I+W P+ PN+ Y + WR++ ET + + NV + R + Y Y
Sbjct: 745 EITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPY 797
Query: 462 EVKVQAINDVGPGPESEVV 480
E++VQA ND G GPE + +
Sbjct: 798 EIRVQAENDFGKGPEPDTI 816
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ N+ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSNKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 103/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP++ A RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSNKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>sp|O94856|NFASC_HUMAN Neurofascin OS=Homo sapiens GN=NFASC PE=1 SV=4
Length = 1347
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 208/495 (42%), Gaps = 61/495 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ---DRYFIQDNVLTIRYLNPERDPAMYQCR 67
C A G P T W NGE L S + D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR--------AVYQCN 409
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
N+ ++A + VL + P P + C +P P W K+G
Sbjct: 410 TSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG 468
Query: 128 NIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 469 Q--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIY 525
Query: 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGL 242
++P +QL C + L + W + + IGN E ++
Sbjct: 526 RMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS--------- 576
Query: 243 LEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQV 287
L I + D G Y CV + + + K + V +G P P +++
Sbjct: 577 LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLEL 636
Query: 288 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 347
++ + S + W G N PIT Y + + F + + +Y G +++
Sbjct: 637 TDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNSAV 689
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I+W
Sbjct: 690 LR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITW 748
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKV 465
P+ PN+ Y + WR++ ET + + NV + R + Y YE++V
Sbjct: 749 TPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEIRV 801
Query: 466 QAINDVGPGPESEVV 480
QA ND G GPE E V
Sbjct: 802 QAENDFGKGPEPESV 816
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWMV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 196/519 (37%), Gaps = 98/519 (18%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C FG P T WF+NG+ N L+ + + ++ L I+ + E D +Y C A N
Sbjct: 452 CPFFGSPIPTLRWFKNGQGSN-----LDGGNYHVYENGSLEIKMIRKE-DQGIYTCVATN 505
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV--WKKDGN 128
L + Q+R+ P+ R + + A G V + C + P K W KD
Sbjct: 506 ILGK--AENQVRLEVKDPTRIYR-MPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDE 562
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG---PSYYEQ 185
+ G R K E+ +L I V+ D G Y+C A+ D +K L VL P+
Sbjct: 563 PLYIGNRMKK-EDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLA 621
Query: 186 LPPK----------ITIAAHRNLQLR---CSAHTEELLDVAY----------IWTHNGVR 222
PK +T A R+++L A+ + D +W +
Sbjct: 622 ALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKY 681
Query: 223 IGNMDLNELE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP-G 280
G+++ L +P +N ++ I V S+ + ++ PP
Sbjct: 682 PGSVNSAVLRLSPYVNYQFRVIAINE------------VGSSHPSLPSERYRTSGAPPES 729
Query: 281 LPGGVQVVEVHKTSATIQWT--DGATNGRPITHYKII-----ARTNWNSTWFNVSEHVIG 333
PG V+ K + I WT + + P Y + R WN+ S +V+G
Sbjct: 730 NPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVG 789
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
+ V VP YE +V A N+ G G P S + D P AP+ +
Sbjct: 790 QTP-------------VYVP---YEIRVQAENDFGKG-PEPESVIGYSGEDYPRAAPTEV 832
Query: 394 GGGGGKIGDLSISWEPLPREK-QNAPNIYYKIFWR------------KKNDTEFQSETLK 440
+S+ W + + Q Y +WR K+ F + L+
Sbjct: 833 KVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLR 892
Query: 441 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
G+ V R+ F Y+ Y++++ +N G GP SE
Sbjct: 893 -----GV-VSRL---FPYSNYKLEMVVVNGRGDGPRSET 922
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>sp|P97685|NFASC_RAT Neurofascin OS=Rattus norvegicus GN=Nfasc PE=1 SV=2
Length = 1240
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 212/496 (42%), Gaps = 63/496 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQ----DRYFIQDNVLTIRYLNPERDPAMYQC 66
C A G P T W NG+ L S P ++ D +D ++ R A+YQC
Sbjct: 358 CRANGNPKPTVQWLVNGDPLQSAP-PNPNREVAGDTIIFRDTQISSR--------AVYQC 408
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
N+ ++A + VL + P P + C +P P W K+
Sbjct: 409 NTSNEHGYLLANAFVSVLDVPPRMLS-PRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKN 467
Query: 127 GNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G GS GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 468 GQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
++P +QL C + L + W + + IGN E ++
Sbjct: 525 YRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS-------- 576
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQ 286
L I + D G Y C+ + + + K + V +G P P ++
Sbjct: 577 -LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLE 635
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ ++ + S + W G N PIT Y + + F + + ++ G ++
Sbjct: 636 LTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNSA 688
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+
Sbjct: 689 VLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEIT 747
Query: 407 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVK 464
W P+ PN+ Y + WR++ ET + + NV + R + Y YE++
Sbjct: 748 WTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIR 800
Query: 465 VQAINDVGPGPESEVV 480
VQA ND G GPE E V
Sbjct: 801 VQAENDFGKGPEPETV 816
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++ W RN N P R + L I + + P
Sbjct: 53 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRR---RSGTLVIDFRSGGRP 109
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116
E YQC A+N+ T S+ ++ P + K L+ EG +T+ CNP
Sbjct: 110 EEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDP-VVVQEGAPLTLQCNPPPGL 168
Query: 117 PKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTAT--NVHGMDESKG 172
P P W I R NG+L S V D YSC A H + +
Sbjct: 169 PSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNP 228
Query: 173 -RLIVLHGPSYYEQLP----PKITIAAH-----RNLQLRCSAHTEELLDVAYIWTHNGVR 222
L VL E+ P P+ T ++ +L L C A D+A W G
Sbjct: 229 FTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIA--WYKKG-- 284
Query: 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
G++ ++ + N N L ITN S D+GEY C+ + +G I +V V+ P
Sbjct: 285 -GDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 337
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 105/283 (37%), Gaps = 34/283 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP +W++ G L S+ E+ ++ NV E D Y
Sbjct: 263 DLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNV-------SEEDSGEYF 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 316 CLASNKMGSIRHTISVRV-KAAPYWLDEPKNLILAPGEDGR--LVCRANGNPKPTVQWLV 372
Query: 126 DGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G+ + S + ++ +Y C +N HG + + VL
Sbjct: 373 NGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL------ 426
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELETPN 235
+PP+ + + RN +R + LD + W NG + N+D
Sbjct: 427 -DVPPR--MLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNG-QGSNLDGGNYHV-- 480
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G LEI D G Y CV + +GK + + V+ P
Sbjct: 481 --YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDP 521
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 22/231 (9%)
Query: 64 YQCRAKNQLK---TRYSSAQLRVLTLK------PSFK-KRPLESETYAGEGGNVTIFCNP 113
Y C A+ + + L+VLT + PSF + S G ++ + C
Sbjct: 211 YSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQMVLRGMDLLLECIA 270
Query: 114 EAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESK 171
P P W K G + S + FEN N L I+ VS +DSG Y C A+N G
Sbjct: 271 SGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 328
Query: 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 231
+ V P Y+ P + +A + +L C A+ V W NG + + N
Sbjct: 329 ISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGDPLQSAPPN-- 383
Query: 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
PN + G + + + Y+C + G + V +++ PP +
Sbjct: 384 --PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 432
>sp|P35331|NRCAM_CHICK Neuronal cell adhesion molecule OS=Gallus gallus PE=1 SV=1
Length = 1284
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 211/491 (42%), Gaps = 46/491 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
D T C A G P + SW NG + + ED R D + I ER A+YQ
Sbjct: 353 DGTLICRANGNPKPSISWLTNGVPI---AIAPEDPSRKVDGDTI--IFSAVQERSSAVYQ 407
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL P P I C +PKP+ W +
Sbjct: 408 CNASNEYGYLLANAFVNVLAEPPRILT-PANKLYQVIADSPALIDCAYFGSPKPEIEWFR 466
Query: 126 --DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G+I+ G +NG L I +D +G Y+C A N G +++ +L V P+
Sbjct: 467 GVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEV-KDPTMI 524
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243
+ P I C + L IW + N +L + E + D L
Sbjct: 525 IKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-----NNELPDDERFLVGKDN--L 577
Query: 244 EITNASFADAGEYECVVKSTVGKISTK----------TTVIVEGPPGLPGGVQVVEVHKT 293
I N + D G Y C+V +T+ +S T I+ P P +++ +
Sbjct: 578 TIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLER 637
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
S + W G N PIT++ I + W +E V G +++ L
Sbjct: 638 SIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGSH---------TTVQLKL 687
Query: 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLP 411
P+ Y F+VIA NE+G +PS PS QY T + P + PS + G G + +L I+WE L
Sbjct: 688 SPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQGIGSEPDNLVITWESLK 747
Query: 412 REKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+ N P + YK+ WR+K+ D E+ S + NV +V F YE+KVQA+ND
Sbjct: 748 GFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGTPTF--VPYEIKVQALND 802
Query: 471 VGPGPE-SEVV 480
+G PE SEV+
Sbjct: 803 LGYAPEPSEVI 813
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G+P W + G L + +R F ++ T++ ++ E D Y+
Sbjct: 264 LLLECIAAGLPTPVIRWIKEGGELPA--------NRTFFENFKKTLKIIDVSEADSGNYK 315
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + P GE G T+ C PKP W
Sbjct: 316 CTARNTLGSTHHVISVTV-KAAPYWITAPRNLVLSPGEDG--TLICRANGNPKPSISWLT 372
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RK+ + ++ S V S +Y C A+N +G + + VL
Sbjct: 373 NGVPIAIAPEDPSRKV-DGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAE--- 428
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I A++ Q+ A + L+D AY + GV+ + NE
Sbjct: 429 ----PPRILTPANKLYQV--IADSPALIDCAYFGSPKPEIEWFRGVKGSILRGNEY---- 478
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +GK + + V+ P
Sbjct: 479 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDP 521
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 26/295 (8%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD 60
+D + ++ CEA G P ++SW RNG + + + Q L + +N +
Sbjct: 53 VDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDK---DAQVTMKPNSGTLVVNIMNGVKA 109
Query: 61 PA---MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
A +YQC A+N+ S+ + + P + K LE + EG ++ + C P
Sbjct: 110 EAYEGVYQCTARNERGAAISNNIVIRPSRSPLWTKEKLEP-NHVREGDSLVLNCRPPVGL 168
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGI-YSCTATNVHGMDESKGRL 174
P ++ D ++ + NG+L S V +D+ + Y C A H + +
Sbjct: 169 PPPIIFWMDNAFQRLPQSERVSQGLNGDLYFSNVQPEDTRVDYICYARFNHTQTIQQKQP 228
Query: 175 I---VLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAY-----IWTHNGVRIG 224
I V E+ P +T + ++LR + E + W G G
Sbjct: 229 ISVKVFSTKPVTERPPVLLTPMGSTSNKVELRGNVLLLECIAAGLPTPVIRWIKEG---G 285
Query: 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ N N L+I + S AD+G Y+C ++T+G +V V+ P
Sbjct: 286 ELPANRTFFENFK---KTLKIIDVSEADSGNYKCTARNTLGSTHHVISVTVKAAP 337
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 90/241 (37%), Gaps = 38/241 (15%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG VQV ++ T A + W G G + ++K+ + + S+ + K
Sbjct: 825 PGNVQVHVINSTLAKVHWDPVPLKSVRGHLQGYKVYYWKVQSLSRR-------SKRHVEK 877
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S+Y+ V N G G P+SP + TP P PS +
Sbjct: 878 KILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEG-PASPDKVFKTPEGVP-SPPSFLK 935
Query: 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454
+ L++ W P Y F N E + +RIP+
Sbjct: 936 ITNPTLDSLTLEWGS-PTHPNGVLTSYILKFQPINNTHELGP----------LVEIRIPA 984
Query: 455 E---------FYYTEYEVKVQAINDVGPGPE--SEVVTIWHDPLVIISYVCQGDLKLCLP 503
Y T Y+ A VG G + E VTI + ++ V G ++ P
Sbjct: 985 NESSLILKNLNYSTRYKFYFNAQTSVGSGSQITEEAVTIMDEAGILRPAVGAGKVQPLYP 1044
Query: 504 R 504
R
Sbjct: 1045 R 1045
>sp|Q6V4S5|SDK2_MOUSE Protein sidekick-2 OS=Mus musculus GN=Sdk2 PE=2 SV=1
Length = 2176
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 209/486 (43%), Gaps = 43/486 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP + +W+++ L+ L Q D L I L P+ D M QC A N
Sbjct: 334 CRAKGVPPPSITWYKDAALVEVGKLTRFKQR----SDGGLQISGLLPD-DTGMLQCFAHN 388
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+S L V ++ P+ + PL+S +G +V + C AP+P W+K I+
Sbjct: 389 AAGEAQTSTYLAVTSIAPNITRGPLDSTVI--DGMSVVLACETSGAPRPAITWQKGERIL 446
Query: 131 GSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G+LLISP D+G Y+C ATN G+DE+ L+V + +
Sbjct: 447 ASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVVW-ARTRITKP 505
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINID-GGLLE 244
P ++ + C + + V Y+W +G + +ET P I +D G L
Sbjct: 506 PQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATLA------VETNPRIRLDRNGSLH 559
Query: 245 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDG 302
I+ D G Y C V S G S + V P P + V + + + W
Sbjct: 560 ISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVATLSTVERRAINLTWAKP 619
Query: 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFK 360
P+ Y + N N+ W ++ VD EA+ V LVP +Y+F+
Sbjct: 620 FDGNSPLMRYVLEMSEN-NAPW-----TILLASVD-----PEATSVMVKGLVPARSYQFR 668
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
+ A N++G G+ S + + + P + P P + G + I W+P P QN
Sbjct: 669 LCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESHQNGILK 728
Query: 421 YYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y I + +F++ T + N+ + + I +T YE++V A N G G S
Sbjct: 729 GYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII-----WTNYEIEVAAYNSAGLGVYS 783
Query: 478 EVVTIW 483
VT W
Sbjct: 784 SKVTEW 789
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 174/485 (35%), Gaps = 42/485 (8%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
CE G P +W + +L S ++ L R+ + ++ + D Y C A N
Sbjct: 427 CETSGAPRPAITWQKGERILASGSVQLP---RFTLLESGSLLISPTHISDAGTYTCLATN 483
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+SA L V+ + K P + G ++ + ++VW+KDG +
Sbjct: 484 SRGVDEASADL-VVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEKDGATL 542
Query: 131 G--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R ++ NG+L IS D G Y+C + G D L V P E
Sbjct: 543 AVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVRQLPHAPEHPVA 602
Query: 189 KITIAAHRNLQLRCSA----------HTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238
++ R + L + + E+ + WT + + ++D E ++ +
Sbjct: 603 TLSTVERRAINLTWAKPFDGNSPLMRYVLEMSENNAPWT---ILLASVDP---EATSVMV 656
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L+ + F + V K K + + ++ E P P V S IQ
Sbjct: 657 KG-LVPARSYQFRLCAVND-VGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQ 714
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD-RYTGRKEASIENVL----VP 353
W P +H I + + + + G V ++ +A + N+L +
Sbjct: 715 W-----QPPPESHQNGILKG------YIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 763
Query: 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 413
W+ YE +V A N G G SS ++ T P P + + +W +
Sbjct: 764 WTNYEIEVAAYNSAGLGVYSSKVTEW-TLQGVPTVPPGNVHAEATNSTTIRFTWNAPSPQ 822
Query: 414 KQNAPNIYYK-IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
N N YK I W + E T + I V + +TEY V G
Sbjct: 823 FINGINQGYKLIAWEPAQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVLCFTTPG 882
Query: 473 PGPES 477
GP S
Sbjct: 883 DGPRS 887
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 136/385 (35%), Gaps = 52/385 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N L +L + RY I T Y+C
Sbjct: 48 LVLTCMAEGSWPLEFKWLHNNRELTRFSL----EYRYMITSLDRT--------HAGFYRC 95
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+N++ + SF++ GE V + P+P+ W +D
Sbjct: 96 IVRNRMGALLQRQTEVQVAYMGSFEEGEKRQSVNHGEAA-VIRAPRISSFPRPQVTWFRD 154
Query: 127 GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPS 181
G I R I L+I D+G Y A N D + I L GP+
Sbjct: 155 GRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPA 214
Query: 182 YYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELET 233
I +A + + C A+ L+ + +W +G + G D N
Sbjct: 215 DPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPLSSGISDYNR--- 271
Query: 234 PNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 290
L I N + +DAG YEC + S+V ++ + V PP V+ E
Sbjct: 272 --------RLTIANPTVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQF---VREPER 320
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-N 349
H T+ + D + + I TW+ + V ++ R+ R + ++ +
Sbjct: 321 HITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVGKLTRFKQRSDGGLQIS 372
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSS 374
L+P T + A N G + S+
Sbjct: 373 GLLPDDTGMLQCFAHNAAGEAQTST 397
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 289
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 951 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1007
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 346
+ S T+Q+ G I+ + + A+ W + + +G E D +
Sbjct: 1008 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQ--LGNEPDA----RSME 1061
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 406
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1062 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLR 1120
Query: 407 WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 457
W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 1121 WMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIEDLEE 1171
Query: 458 YTEYEVKVQAINDVGPGPESEVV 480
+TEY V+VQA N +G GP S+ V
Sbjct: 1172 WTEYRVQVQAFNAIGSGPWSQAV 1194
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 287 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 346
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1836 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1892
Query: 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1893 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1926
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 333
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1406 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1464
Query: 334 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 393
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1465 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1512
Query: 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 453
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1513 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1572
Query: 454 SEFY-------------------YTEYEVKVQAINDVGPGPES 477
S + + YE+++ N VG GP S
Sbjct: 1573 SLYSMRNLTRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLS 1615
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 9/124 (7%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1599 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1657
Query: 417 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 473
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1658 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1712
Query: 474 GPES 477
GP S
Sbjct: 1713 GPRS 1716
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 77/196 (39%), Gaps = 15/196 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338
PG P G+ EV TS + W A I Y+I R N +T + V+ +
Sbjct: 1305 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLN-ATTANTATVEVLAPSARQ 1363
Query: 339 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 396
Y + L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1364 Y-------MATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVQQE 1415
Query: 397 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 456
K + +SWE P +P YY I R+ + + N V F
Sbjct: 1416 DVKARSVLLSWE--PGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASAFTVDRLKPF 1473
Query: 457 YYTEYEVKVQAINDVG 472
T Y+ +V+A ND+G
Sbjct: 1474 --TSYKFRVKATNDIG 1487
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 275 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 328
++ PP + P V + +TS ++W + NG P + YKI R++ + +
Sbjct: 1096 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 1153
Query: 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 388
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1154 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1205
Query: 389 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 448
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1206 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1264
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
++ Y YEV+V A +G G S
Sbjct: 1265 -AQLTGLGKYVLYEVQVLAFTRIGDGSPSH 1293
>sp|O42414|NFASC_CHICK Neurofascin OS=Gallus gallus GN=NFASC PE=1 SV=1
Length = 1369
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 217/493 (44%), Gaps = 62/493 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLE----DQDRYFIQDNVLTIRYLNPE-RDPAMYQ 65
C A G P + W NGE P+E + R D TI + + + A+YQ
Sbjct: 376 CRANGNPKPSIQWLVNGE-------PIEGSPPNPSREVAGD---TIVFRDTQIGSSAVYQ 425
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N+ ++A + VL + P P + + C +P P W K
Sbjct: 426 CNASNEHGYLLANAFVSVLDVPPRILA-PRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFK 484
Query: 126 DG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G N++ GG K ENG+L +S ++D GIY+C ATN+ G E++ RL V P+
Sbjct: 485 NGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEV-KDPTRI 542
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGG 241
+ P + +L C + L + W + + IGN E D G
Sbjct: 543 VRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKE--------DDG 594
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------EGPPGLPGGVQVVE 289
L I + D G+Y CV + + K S K + V + P P +++ +
Sbjct: 595 LT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELSD 653
Query: 290 VHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKEASI 347
+ + S + W G N PIT Y + + TW N S RY G +++
Sbjct: 654 LAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVNSAL 704
Query: 348 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 407
+ L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++ I+W
Sbjct: 705 LS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITW 763
Query: 408 EPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+KVQ
Sbjct: 764 TPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEIKVQ 817
Query: 467 AINDVGPGPESEV 479
A ND G PE E
Sbjct: 818 AENDFGRAPEPET 830
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 186/500 (37%), Gaps = 89/500 (17%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQ 65
DL C A GVP W++ G L + LE+ ++ NV E D Y
Sbjct: 281 DLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNV-------SEEDSGEYF 333
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A N++ + + +RV P + P GE G + C PKP W
Sbjct: 334 CLASNKMGSIRHTISVRV-KAAPYWLDEPQNLILAPGEDGR--LVCRANGNPKPSIQWLV 390
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I E I V RD S +Y C A+N HG + + VL
Sbjct: 391 NGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVYQCNASNEHGYLLANAFVSVL---- 444
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTHNGVRIGNMDLNELET 233
+PP+ I A RN ++ + LD + W NG GNM L+
Sbjct: 445 ---DVPPR--ILAPRNQLIKVIQYNRTRLDCPFFGSPIPTLRWFKNGQ--GNM----LDG 493
Query: 234 PNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK 292
N + G LE++ A D G Y CV + +GK+ + + V+ P + G + V +
Sbjct: 494 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQVRLEVKDPTRIVRGPEDQVVKR 553
Query: 293 TSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 350
S P H ++ TW + + Y G + ++
Sbjct: 554 GSM------------PRLHCRVKHDPTLKLTVTW-------LKDDAPLYIGNRMKKEDDG 594
Query: 351 LVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPA----DKPYQAPSRIGGGGGKIG 401
L + E + +A EL + PA D P + P R ++
Sbjct: 595 LTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDLPKERPDR--PRDLELS 652
Query: 402 DLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GNVGIAVVRI 452
DL+ ++W +P + N+P Y + + + FQ T + GNV A++ +
Sbjct: 653 DLAERSVKLTW--IPGDDNNSPITDYIVQFE---EDRFQPGTWHNHSRYPGNVNSALLSL 707
Query: 453 PSEFYYTEYEVKVQAINDVG 472
Y Y+ +V A+NDVG
Sbjct: 708 SP---YVNYQFRVIAVNDVG 724
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 119/314 (37%), Gaps = 47/314 (14%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NP 57
+D + ++ CEA G P T+SW RNG+ N P R + L I + P
Sbjct: 54 VDPRDNIFIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRR---RSGTLVIDFHGGGRP 110
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
+ YQC A+N T SS ++ P + K ++ EG +++ CNP
Sbjct: 111 DDYEGEYQCFARNDYGTALSSKIHLQVSRSPLWPKEKVDV-IEVDEGAPLSLQCNPPPGL 169
Query: 118 KPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGI-YSCTA------------- 161
P ++ ++ I R +NG+L S V D+ YSC A
Sbjct: 170 PPPVIFWMSSSMEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNP 229
Query: 162 -------------TNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAH 205
T++ D R + PS+ + R +L L C A
Sbjct: 230 YTLKVKTKKPHNETSLRNHTDMYSARGVTETTPSFMYPYGTSSSQMVLRGVDLLLECIAS 289
Query: 206 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265
D+ +W G G + + + N N L I+N S D+GEY C+ + +G
Sbjct: 290 GVPAPDI--MWYKKG---GELPAGKTKLENFN---KALRISNVSEEDSGEYFCLASNKMG 341
Query: 266 KISTKTTVIVEGPP 279
I +V V+ P
Sbjct: 342 SIRHTISVRVKAAP 355
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 281
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 396 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 450
>sp|Q98902|L1CAM_TAKRU Neural cell adhesion molecule L1 OS=Takifugu rubripes GN=l1cam PE=3
SV=1
Length = 1277
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 205/486 (42%), Gaps = 54/486 (11%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETL----PLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
C+A G+P T +W NG L++ +L L + ++D + D A+YQC
Sbjct: 370 CQADGIPSPTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFG--------DTAIYQC 421
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
+A N+ T ++ + V+ L P + T+ EG + C +PKPK W+
Sbjct: 422 QASNKHGTILANTNVYVIELPPQILTENGNTYTFV-EGQKALLECETFGSPKPKVTWESS 480
Query: 127 G-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC----TATNVHGMDESKGRLIVLHGPS 181
+++ + R + NG L I+ VS DD GIY+C + +V+ E R ++L P
Sbjct: 481 SISLLLADPRVNLLTNGGLEIANVSHDDEGIYTCLVQGSNISVNAEVEVLNRTVILSPPQ 540
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDG 240
P K I C T+ L + W N +I ++ T DG
Sbjct: 541 ALRLQPGKTAI-------FTCLYVTDPKLSSPLLQWRKNDQKIFESHSDKKYT----FDG 589
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 300
L I+N D G Y C + + + + +T+ + P P +QV T+ WT
Sbjct: 590 PGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTLCDRPDPPVHLQVTNAKHRVVTLNWT 649
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
G N PI Y + + W +E+ R K+ + L P+
Sbjct: 650 PGDDNNSPILEYVVEFEDQDMKENGW-------------EELKRVAADKK-HVNLPLWPY 695
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+Y F+VIA N+ G +PS S Y TPAD P P + L I+WE + +
Sbjct: 696 MSYRFRVIAINDQGKSDPSKLSDLYKTPADAPDSNPEDVRSESTDPDTLVITWEEMDKRN 755
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N P+ Y + WR+ + + +EY +V F + +E+KVQA+N G G
Sbjct: 756 FNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFIVTDVQNF--SAFEIKVQAVNKKGLG 811
Query: 475 PESEVV 480
PE + +
Sbjct: 812 PEPDPI 817
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 11/193 (5%)
Query: 93 RPLESET--YAGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPV 149
RP S + +A G + + C + P PK W +KDG + S + +F+ L + +
Sbjct: 260 RPTGSHSTYHALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRISKDMFDR-RLQFTNI 318
Query: 150 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 209
S D G Y CTA NV G + V P Y+ P A ++L C A + +
Sbjct: 319 SESDGGEYQCTAENVQGRTFHTYTVTVEASP-YWTNAPVSQLYAPGETVKLDCQA--DGI 375
Query: 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269
WT NGV + LE + G L + + F D Y+C + G I
Sbjct: 376 PSPTITWTVNGVPLS---ATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILA 432
Query: 270 KTTV-IVEGPPGL 281
T V ++E PP +
Sbjct: 433 NTNVYVIELPPQI 445
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 127/304 (41%), Gaps = 51/304 (16%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY-LNPERDP--- 61
DL CEA G P T+ W ++GE + P D + ++ ++ Y L+ D
Sbjct: 67 DLVMRCEASGNPSPTFHWTKDGEEFD----PSSDPEMKVTEEAGSSVFYTLSNTMDTLKQ 122
Query: 62 --AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPK 118
Y C A N+L T S+A + ++ P +K +E A G ++ + CN P+++ +
Sbjct: 123 YQGKYICYASNELGTAVSNAAVLMIDAPPVQQKEKKVTEK-AEAGHSIALSCNPPQSSMQ 181
Query: 119 PKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRLIV 176
P W + I R + ++GNL + + +DS Y+C N+ + R I+
Sbjct: 182 PIIHWMDNRLRHIRLSDRVMVGKDGNLYFANLLTEDSRNDYTC---NIQYL---ATRTIL 235
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLR-CSAHTEELLDVAYIWTHNGVRIGNMDL----NEL 231
P P + R +R +H+ T++ +R ++L L
Sbjct: 236 AKEPITLTVNPSNLVPRNRRPQMMRPTGSHS----------TYHALRGQTLELECIVQGL 285
Query: 232 ETPNIN---IDGGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
TP ++ DG + L+ TN S +D GEY+C ++ G+ TV V
Sbjct: 286 PTPKVSWLRKDGEMSESRISKDMFDRRLQFTNISESDGGEYQCTAENVQGRTFHTYTVTV 345
Query: 276 EGPP 279
E P
Sbjct: 346 EASP 349
>sp|Q92823|NRCAM_HUMAN Neuronal cell adhesion molecule OS=Homo sapiens GN=NRCAM PE=1 SV=3
Length = 1304
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 208/492 (42%), Gaps = 49/492 (9%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMY 64
D T C A G P SW NG + E P +D R D TI + N ER A+Y
Sbjct: 377 DGTLICRANGNPKPRISWLTNGVPI--EIAP-DDPSRKIDGD---TIIFSNVQERSSAVY 430
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC A N+ ++A + VL P P + + C +P P W
Sbjct: 431 QCNASNEYGYLLANAFVNVLAEPPRILT-PANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 125 KDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
K GS I+ ENG L I +D +G Y+C A N GM +++ L + P+
Sbjct: 490 KGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDPT 546
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241
+ + P + + C + L + +W + N +L E +D
Sbjct: 547 WIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRELPSDE--RFTVDKD 599
Query: 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVH 291
L + + S D+G Y CV +T+ +S + V P P P +++ +
Sbjct: 600 HLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQL 659
Query: 292 KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIEN 349
S + WT G N PIT + I + W + +E + + +
Sbjct: 660 DKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQTTAQL 709
Query: 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 409
L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I+W+P
Sbjct: 710 KLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKP 769
Query: 410 LPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 468
L + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA+
Sbjct: 770 LNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQAL 824
Query: 469 NDVGPGPESEVV 480
ND+G PE VV
Sbjct: 825 NDMGFAPEPAVV 836
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 26/278 (9%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L+ C A G+P W + +L +++ Y + L I +++ E D YQC
Sbjct: 288 LSLECIAEGLPTPIIYWAKEDGMLP------KNRTVYKNFEKTLQIIHVS-EADSGNYQC 340
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD 126
AKN L + + +RV P + P GE G T+ C PKP+ W +
Sbjct: 341 IAKNALGAIHHTISVRV-KAAPYWITAPQNLVLSPGEDG--TLICRANGNPKPRISWLTN 397
Query: 127 G---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
G I RKI + ++ S V S +Y C A+N +G + + VL P
Sbjct: 398 GVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 184 EQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
L P T + A+R L C+ L + + G + + D+ L +
Sbjct: 457 --LTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSAL-HEDIYVLH------EN 507
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G LEI A G Y CV ++ +G + + ++ P
Sbjct: 508 GTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 960 IVNPTLDSLTLEWDP 974
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GTGTLIINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE T G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQS-GQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVH--------- 165
P ++ D + ++ + NG+L S V +D+ Y C A H
Sbjct: 174 PPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 166 ------GMDESKGRLIV------LHGPSYYEQLPPKITI----AAHRN------LQLRCS 203
+DE + +G + PP A+++ L L C
Sbjct: 234 ISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGNASNKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + N N L+I + S AD+G Y+C+ K+
Sbjct: 294 A--EGLPTPIIYWAKED---GMLPKNRTVYKNFE---KTLQIIHVSEADSGNYQCIAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G I +V V+ P
Sbjct: 346 LGAIHHTISVRVKAAP 361
>sp|Q7Z5N4|SDK1_HUMAN Protein sidekick-1 OS=Homo sapiens GN=SDK1 PE=1 SV=3
Length = 2213
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 202/478 (42%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+A GVP T W+++ ++ L++ + L I+ L PE D ++QC A N
Sbjct: 408 CQAMGVPLPTLQWYKDAISISR----LQNPRYKVLASGGLRIQKLRPE-DSGIFQCFASN 462
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P F +RP++ T +G + C APKP WK++ +I+
Sbjct: 463 EGGEIQTHTYLDVTNIAPVFTQRPVD--TTVTDGMTAILRCEVSGAPKPAITWKRENHIL 520
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N G + L V + S
Sbjct: 521 ASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNRTSIVHP- 579
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
P + L C A + + + Y+W + V + + + + DG LL I+
Sbjct: 580 PEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIV---VEKDGSLL-IS 635
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + V H + + W
Sbjct: 636 QTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPFD 695
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
PI +Y I+ + NS W V +G E+ T + L P TY+F+V A
Sbjct: 696 GNSPILYY-IVELSENNSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 746
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
NE+G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 747 NEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 806
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E+Q + + + + +T+YE++V A N G G S VT
Sbjct: 807 RYRLAGLPGEYQQRNIT---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 861
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 105/283 (37%), Gaps = 33/283 (11%)
Query: 5 ADLTWTCEAFGVP--DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
++ T C A P D++ +W RNG + S L R N + D
Sbjct: 309 SETTLECIASARPVEDLSVTWKRNGVRITSG---LHSFGRRLTISNPTSA-------DTG 358
Query: 63 MYQCRAK---NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
Y C A + + ++A L ++ P F P ES A V I C P P
Sbjct: 359 PYVCEAALPGSAFEPARATAFLFIIE-PPYFTAEP-ESRISAEVEETVDIGCQAMGVPLP 416
Query: 120 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W KD I R K+ +G L I + +DSGI+ C A+N G ++ L V
Sbjct: 417 TLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVT 476
Query: 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGVRIGNMDLNELE 232
+ + Q P T+ LRC + +I VRI L
Sbjct: 477 NIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFML---- 532
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275
++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 533 -----LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 570
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 100/266 (37%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W R+ +SE + +Y I +++ L D Y+C
Sbjct: 122 LVLTCLAEGSWPLEFKWMRD----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 169
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ A + I + P+P+ W
Sbjct: 170 VVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAILNLLPI----TSYPRPQVTW 225
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I +
Sbjct: 226 FREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIHLSIARDV 285
Query: 181 SYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
E + P I +A L C A + D++ W NGVRI
Sbjct: 286 GTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI--------- 336
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L I+N + AD G Y C
Sbjct: 337 TSGLHSFGRRLTISNPTSADTGPYVC 362
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 189/511 (36%), Gaps = 83/511 (16%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
CE G P +W R +L S ++ + R+ ++ L I + + D Y C A
Sbjct: 501 CEVSGAPKPAITWKRENHILASGSVRI---PRFMLLESGGLQIAPVFIQ-DAGNYTCYAA 556
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDG 127
N + +SA L V + S P + +G T+ C P+ ++VWKKD
Sbjct: 557 NTEGSLNASATLTVWN-RTSIVHPP--EDHVVIKGTTATLHCGATHDPRVSLRYVWKKDN 613
Query: 128 NII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ S R + ++G+LLIS D G YSC + G D RL V+ P
Sbjct: 614 VALTPSSTSRIVVEKDGSLLISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPH---- 669
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---VRIGNMDLNELETP----NINI 238
+ +NL + ++ + ++++ +G + ++L+E +P N+
Sbjct: 670 --------SPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYYIVELSENNSPWKVHLSNV 721
Query: 239 DGGLLEITNASFADAGEYE---CVVKST-VGKISTKTTVIV--EGPPGLPGGVQVVEVHK 292
+ +T + A Y+ C V G+ S +T+ ++ E PP P +V +
Sbjct: 722 GPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPK-NIVASGR 780
Query: 293 T--SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-- 348
T S +QW P T + + R + + + Y R S E
Sbjct: 781 TNQSIMVQW-----QPPPETEHNGVLRGY-------ILRYRLAGLPGEYQQRNITSPEVN 828
Query: 349 ----NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404
L+ W+ YE +V A N G G S +Y T P P + +
Sbjct: 829 YCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEY-TLQGVPTAPPQNVQTEAVNSTTIQ 887
Query: 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------- 457
W P P++ N N YK+ + E + VV I +F+
Sbjct: 888 FLWNPPPQQFINGINQGYKLLAWPADAPE------------AVTVVTIAPDFHGVHHGHI 935
Query: 458 -----YTEYEVKVQAINDVGPGPESEVVTIW 483
+T Y V G GP S +W
Sbjct: 936 TNLKKFTAYFTSVLCFTTPGDGPPSTPQLVW 966
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 85/223 (38%), Gaps = 36/223 (16%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1542
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 444
+ I W+P E N Y+I++R+ KN +E + +
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKT 1652
Query: 445 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIW 483
V + E Y YEV + A N +G P S V ++
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1695
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1673 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1731
Query: 417 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP+
Sbjct: 1732 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPK 1789
Query: 477 SE 478
S+
Sbjct: 1790 SD 1791
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G P SPS
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1162
Query: 377 PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 432
+ T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1163 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1218
Query: 433 EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVV 480
+ QS + + + R+ EF + EYE+++QA N VG GP SEVV
Sbjct: 1219 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVV 1267
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 18/238 (7%)
Query: 255 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 310
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1350 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1409
Query: 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1410 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1461
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1462 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELP 1520
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
E+Q+ + VV F T Y+++++A ND+G E+E VT D
Sbjct: 1521 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQD 1576
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 24/247 (9%)
Query: 239 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 293
D +LEI N + + + VG S++ ++ PP + P V V +T
Sbjct: 1129 DAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASET 1188
Query: 294 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIE 348
S ++W D NG P + Y+I W S ++ + + V DR +E +IE
Sbjct: 1189 SLRLRWVPLPDSQYNGNPESVGYRI---KYWRS---DLQSSAVAQVVSDRL--EREFTIE 1240
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1241 ELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWT 1298
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+P + QN + YKI +R K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1299 SVPEQDQNGLILGYKILFRAKDLDPEPRSHIVR--GNHTQSAL-LAGLRKFVLYELQVLA 1355
Query: 468 INDVGPG 474
+G G
Sbjct: 1356 FTRIGNG 1362
>sp|Q05695|L1CAM_RAT Neural cell adhesion molecule L1 OS=Rattus norvegicus GN=L1cam PE=2
SV=3
Length = 1259
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 208/479 (43%), Gaps = 38/479 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG + + +Y I+ L + + P D + QC A+N
Sbjct: 353 CQVQGRPQPEVTWRINGMSIEK----VNKDQKYRIEQGSLILSNVQPS-DTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 408 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG+L I + +D+G Y C A N L V + P
Sbjct: 466 TVLQDERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQG--P 523
Query: 189 KITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEIT 246
+ TI + C A + L + W +G DL E ++ I+ G L I
Sbjct: 524 RSTIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGQLVIK 578
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGA 303
+ ++D G+Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 579 SLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAE 638
Query: 304 TNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 639 DHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRV 688
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I
Sbjct: 689 TAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQ 748
Query: 422 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y++ WR + ET KE V + + + + YE+KVQA+N+ G GPE +V
Sbjct: 749 YRVQWRPLG----KQETWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVT 802
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 186/488 (38%), Gaps = 54/488 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 259 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 367
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G I + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 368 NGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHG-------LLLANAYIYV 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 421 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 474
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 475 PYANGHLGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRST-IEKKGAR 533
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 534 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGQLVIKSLDYSDQ 585
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
++ +A EL E + +P P+ S K + +SW P E N
Sbjct: 586 GDYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 641
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 474
+P Y I F K+ E K GN +++ Y Y +V AIN GPG
Sbjct: 642 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 698
Query: 475 --PESEVV 480
P SE V
Sbjct: 699 PSPVSETV 706
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 185/501 (36%), Gaps = 73/501 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
C+AFG P + W L+ E + +R+F N L IR L D Y C+A
Sbjct: 447 CKAFGAPVPSVQW------LDEEGTTVLQDERFFPYANGHLGIRDLQ-ANDTGRYFCQAA 499
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG 127
N A L+V K + + T +G VT C P + W+ DG
Sbjct: 500 NDQNNVTILANLQV---KEATQITQGPRSTIEKKGARVTFTCQASFDPSLQASITWRGDG 556
Query: 128 NIIGSGGR--RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ G + E+G L+I + D G YSC A+ ES+ +L+V+ P
Sbjct: 557 RDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPH 616
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
L + R+L + H L + HN + +E +I + E+
Sbjct: 617 LE-----LSDRHLLKQSQVH----LSWSPAEDHN---------SPIEKYDIEFEDK--EM 656
Query: 246 TNASFADAGEYECVVKSTVGKIST------KTTVIVEGPPGLPGGVQVVEV------HKT 293
+ G+ ST K+S + T I + PG P V V K
Sbjct: 657 APEKWFSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKN 716
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
++ TN IT +K + +WN+ + V +GK+ T +++ + L
Sbjct: 717 PVDVRGEGNETNNMVIT-WKPLRWMDWNAPQIQYRVQWRPLGKQ---ETWKEQTVSDPFL 772
Query: 352 VPWST-----YEFKVIAGNELGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDL 403
V +T YE KV A N G G P PQ + D P +P +
Sbjct: 773 VVSNTSTFVPYEIKVQAVNNQGKG----PEPQVTIGYSGEDYPQVSPELEDITIFNSSTV 828
Query: 404 SISWEPLPREKQNAPNIYYKI-FW-----RKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ W P+ + Y + +W RK + + N A+ +
Sbjct: 829 LVRWRPVDLAQVKGHLRGYNVTYWWKGSQRKHSKRHVHKSHMVVPANTTSAI--LSGLRP 886
Query: 458 YTEYEVKVQAINDVGPGPESE 478
Y+ Y V+VQA N G GP SE
Sbjct: 887 YSSYHVEVQAFNGRGLGPASE 907
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 110/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 52 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 112 RCYASNNLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPLRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 171 MNSKILHIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S + + ++L L C A E W H
Sbjct: 231 TNSMIDRKPRLLFPTNSSSH------LVALQGQSLILECIA--EGFPTPTIKWLHPS--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 280 DPMPTDRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 332
>sp|P11627|L1CAM_MOUSE Neural cell adhesion molecule L1 OS=Mus musculus GN=L1cam PE=1 SV=1
Length = 1260
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 212/479 (44%), Gaps = 38/479 (7%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C+ G P +W NG ++ ET+ +DQ +Y I+ L + + P D + QC A+N
Sbjct: 353 CQVQGRPQPEITWRING--MSMETVN-KDQ-KYRIEQGSLILSNVQP-TDTMVTQCEARN 407
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KKDGN 128
Q ++A + V+ L + +++TY A EG + C AP P W ++G
Sbjct: 408 QHGLLLANAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGT 465
Query: 129 IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188
+ R + NG L I + +D+G Y C A N L V + Q P
Sbjct: 466 TVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEA-TQITQGPR 524
Query: 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITN 247
+ C A + L + W +G DL E ++ I+ G L I +
Sbjct: 525 SAIEKKGARVTFTCQASFDPSLQASITWRGDG-----RDLQERGDSDKYFIEDGKLVIQS 579
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGAT 304
++D G Y CV + + ++ ++ ++V G PG +++ + H ++ + W+
Sbjct: 580 LDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAED 639
Query: 305 NGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 362
+ PI Y I + WF++ + V G + S L P+ Y F+V
Sbjct: 640 HNSPIEKYDIEFEDKEMAPEKWFSLGK-VPGNQT---------STTLKLSPYVHYTFRVT 689
Query: 363 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 422
A N+ G GEPS S TP P + P + G G + ++ I+W+PL NAP I Y
Sbjct: 690 AINKYGPGEPSPVSESVVTPEAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQY 749
Query: 423 KIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ WR + E ++ +T+ + VV S F YE+KVQA+N+ G GPE +V
Sbjct: 750 RVQWRPQGKQETWRKQTVSD----PFLVVSNTSTF--VPYEIKVQAVNNQGKGPEPQVT 802
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 184/484 (38%), Gaps = 51/484 (10%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W L S+ +P DR Q++ T++ LN E D Y
Sbjct: 259 LILECIAEGFPTPTIKW-----LHPSDPMPT---DRVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + ++P +S Y G G + C + P+P+ W+
Sbjct: 311 CLAENSLGSARHAYYVTV-EAAPYWLQKP-QSHLY-GPGETARLDCQVQGRPQPEITWRI 367
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + E G+L++S V D+ + C A N HG L++ + Y
Sbjct: 368 NGMSMETVNKDQKYRIEQGSLILSNVQPTDTMVTQCEARNQHG-------LLLANAYIYV 420
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---- 239
QLP +I + + T LL A+ G + ++ + E + D
Sbjct: 421 VQLPARI-LTKDNQTYMAVEGSTAYLLCKAF-----GAPVPSVQWLDEEGTTVLQDERFF 474
Query: 240 ---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT 296
G L I + D G Y C + ++ + V+ + G + + K A
Sbjct: 475 PYANGTLSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSA-IEKKGAR 533
Query: 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356
+ +T A+ + A W ++ E + D+Y + L
Sbjct: 534 VTFTCQASFDPSLQ-----ASITWRGDGRDLQER---GDSDKYFIEDGKLVIQSLDYSDQ 585
Query: 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 416
+ +A EL E + +P P+ S K + +SW P E N
Sbjct: 586 GNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS--DRHLLKQSQVHLSWSPA--EDHN 641
Query: 417 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 475
+P Y I F K+ E K GN +++ Y Y +V AIN GPG
Sbjct: 642 SPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGE 698
Query: 476 ESEV 479
S V
Sbjct: 699 PSPV 702
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 184/501 (36%), Gaps = 73/501 (14%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN-VLTIRYLNPERDPAMYQCRAK 69
C+AFG P + W L+ E + +R+F N L+IR L D Y C+A
Sbjct: 447 CKAFGAPVPSVQW------LDEEGTTVLQDERFFPYANGTLSIRDLQ-ANDTGRYFCQAA 499
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG 127
N A L+V K + + +G VT C P + W+ DG
Sbjct: 500 NDQNNVTILANLQV---KEATQITQGPRSAIEKKGARVTFTCQASFDPSLQASITWRGDG 556
Query: 128 NIIGSGGR--RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+ G + E+G L+I + D G YSC A+ ES+ +L+V+ P
Sbjct: 557 RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPH 616
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245
L + R+L + H L + HN + +E +I + E+
Sbjct: 617 LE-----LSDRHLLKQSQVH----LSWSPAEDHN---------SPIEKYDIEFEDK--EM 656
Query: 246 TNASFADAGEYECVVKSTVGKIST------KTTVIVEGPPGLPGGVQVVEV------HKT 293
+ G+ ST K+S + T I + PG P V V K
Sbjct: 657 APEKWFSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSESVVTPEAAPEKN 716
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVL 351
++ TN IT +K + +WN+ + V GK+ T RK+ + L
Sbjct: 717 PVDVRGEGNETNNMVIT-WKPLRWMDWNAPQIQYRVQWRPQGKQ---ETWRKQTVSDPFL 772
Query: 352 VPWST-----YEFKVIAGNELGYGEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDL 403
V +T YE KV A N G G P PQ + D P +P +
Sbjct: 773 VVSNTSTFVPYEIKVQAVNNQGKG----PEPQVTIGYSGEDYPQVSPELEDITIFNSSTV 828
Query: 404 SISWEPLPREKQNAPNIYYKI-FW-----RKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ W P+ + Y + +W RK + + N A+ +
Sbjct: 829 LVRWRPVDLAQVKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSAI--LSGLRP 886
Query: 458 YTEYEVKVQAINDVGPGPESE 478
Y+ Y V+VQA N G GP SE
Sbjct: 887 YSSYHVEVQAFNGRGLGPASE 907
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 37/296 (12%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMY 64
D++ CEA G P V + W ++G E L + + + + +R +Y
Sbjct: 52 DISLKCEARGRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIY 111
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
+C A N+L T S V P + K ++ EG +V + CNP + P ++
Sbjct: 112 RCYASNKLGTAMSHEIQLVAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAAPPRIYW 170
Query: 125 KDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA------------------TN 163
+ I I R + +NG+L + V + D+ Y C A
Sbjct: 171 MNSKIFDIKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKP 230
Query: 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223
+ M + K RL+ S ++ ++L L C A E W H
Sbjct: 231 TNSMIDRKPRLLFPTNSS------SRLVALQGQSLILECIA--EGFPTPTIKWLHPS--- 279
Query: 224 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
M + + N N L++ N D GEY C+ ++++G V VE P
Sbjct: 280 DPMPTDRVIYQNHN---KTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAP 332
>sp|Q8AV58|SDK1_CHICK Protein sidekick-1 OS=Gallus gallus GN=SDK1 PE=2 SV=1
Length = 2169
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 200/485 (41%), Gaps = 31/485 (6%)
Query: 4 QADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAM 63
+ D+ C+A GVP + W+++ L+ L++ + L I L P+ D +
Sbjct: 353 EKDVDILCQAMGVPIPSLVWYKDSVPLSK----LQNPRYKVLLSGGLRIHALRPQ-DAGI 407
Query: 64 YQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+QC A N+ + L V +KP+F + P +T EG + C APKP W
Sbjct: 408 FQCFASNKAGEIQTYTYLDVTNIKPAFIQPP--EDTTVTEGMTAMLTCEVSGAPKPAISW 465
Query: 124 KKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179
KK I+ SG R + E+G L I+PV D+G Y+C A N G + L V +
Sbjct: 466 KKGNQILASGSVQIPRFVLLESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTVWNR 525
Query: 180 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239
++ P T+ LRC A + + + Y+W + V I + + + D
Sbjct: 526 -TFIVHPPENSTVIKGTTATLRCEATHDPRISIRYVWKKDSVVINPSSSSRI---TVEKD 581
Query: 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV--EVHKTSATI 297
G LL I+ D G+Y C V S G S + V P P + + S +
Sbjct: 582 GTLL-ISQTWSGDIGDYTCEVISFGGNDSRMARLEVIELPHSPQNLLATLNSSYSRSVVL 640
Query: 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357
W P+ +Y + N NS W + + + + L P TY
Sbjct: 641 SWVRPFDGNSPVLYYMVELSEN-NSPW--------KVHLSNLDPKMTSVTVSGLTPARTY 691
Query: 358 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA 417
+F+V A N++G G+ SS + + P + P P I G + + W+P P + N
Sbjct: 692 QFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPESEHNG 751
Query: 418 PNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476
Y + +R E+Q K + I + +T+YE++V + N G G
Sbjct: 752 VLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLVTDLIIWTQYEIQVASYNGAGLGAF 808
Query: 477 SEVVT 481
S VT
Sbjct: 809 SRPVT 813
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 175/442 (39%), Gaps = 59/442 (13%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDN---VLTIRYLNPERDPAMYQC 66
TCE G P SW + ++L S ++ + R+ + ++ +T +L +D Y C
Sbjct: 452 TCEVSGAPKPAISWKKGNQILASGSVQI---PRFVLLESGGLQITPVFL---QDAGNYTC 505
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWK 124
A N + L V +F P E+ T +G T+ C P+ ++VWK
Sbjct: 506 HAVNSEGALNAFVMLTVWNR--TFIVHPPENSTVI-KGTTATLRCEATHDPRISIRYVWK 562
Query: 125 KDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
KD +I S R + ++G LLIS D G Y+C + G D RL V+ P
Sbjct: 563 KDSVVINPSSSSRITVEKDGTLLISQTWSGDIGDYTCEVISFGGNDSRMARLEVIELPHS 622
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP----NINI 238
+ L + + R++ L + V Y ++L+E +P N+
Sbjct: 623 PQNLLATLNSSYSRSVVLSWVRPFDGNSPVLYYM---------VELSENNSPWKVHLSNL 673
Query: 239 DGGLLEITNASFADAGEYE---CVVKST-VGKISTKTTVIV--EGPPGLPGGVQVVEVHK 292
D + +T + A Y+ C V G+ S++T+ ++ E PP P +V +
Sbjct: 674 DPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPK-NIVASGR 732
Query: 293 T--SATIQWT-------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
T S +QW +G +G I Y++ A + N++ I
Sbjct: 733 TNQSIMVQWQPPPESEHNGVLHGY-ILRYRL-AGLPGEYQYKNITSAEINY--------- 781
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
+ L+ W+ YE +V + N G G S P +Y T P P + +
Sbjct: 782 --CLVTDLIIWTQYEIQVASYNGAGLGAFSRPVTEY-TLQGVPTAPPQNVQVEAVNSTTI 838
Query: 404 SISWEPLPREKQNAPNIYYKIF 425
W P P++ N N YK+
Sbjct: 839 QFLWSPPPQQFINGINQGYKLL 860
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 114/306 (37%), Gaps = 45/306 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W N +SE + +Y I D YQC
Sbjct: 74 LVLTCLAEGSWPLEFKWLHN----DSEITTYSSEYKYIIP--------ALQRSDAGFYQC 121
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +F + GE V F + + P+P+ W
Sbjct: 122 IVRNRMGALLQRRSEVQVAYMG---NFMDANQKKTVTEGEAA-VLNFMHIFSYPRPQVTW 177
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+DG+ I R I L+I S D+G Y A N + LI L S
Sbjct: 178 FRDGHKIIPSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSPLIHLSIASAT 237
Query: 184 EQ---------LPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ +PP K + + L C A + ++ +W NG++I
Sbjct: 238 DPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIKI--------- 288
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL---PGGVQ 286
T I+ G L ITN + AD G Y C K ST K + + PP P GV
Sbjct: 289 TSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFTAEPEGVI 348
Query: 287 VVEVHK 292
+ EV K
Sbjct: 349 LAEVEK 354
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
EG PG P + V + + T+QWT+G + +P T Y I AR + W + K+
Sbjct: 1852 EGSPGSPHEILVTK-SASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLW-----DMFVKD 1905
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
+ R S++ L TYEF+V+A NE GYGEPS PS + + P+
Sbjct: 1906 IPRSATSYTVSLDK-LKQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPF 1956
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 269 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNS 322
T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1009 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSICKWIVEGQVGVLGEEE 1068
Query: 323 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382
W VS H EVD + + N L P++ Y F++ N +G S PS T
Sbjct: 1069 EW--VSLH----EVDNEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGASPLSQPSRVIQTL 1121
Query: 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ-SET 438
P AP + L + W PLP + N ++ Y+I FWR + Q S
Sbjct: 1122 QAPPDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWR----VDLQPSAL 1177
Query: 439 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
LK + I +TEYE+++QA N +G GP +EVV +
Sbjct: 1178 LKVISDRLERECTIQDLEEWTEYELQIQAFNAIGAGPWNEVVGV 1221
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 25/255 (9%)
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI--VEGPPGL-PGGVQVVEVHKT 293
D +LE+ N + + + VG +S + VI ++ PP + PG V V ++
Sbjct: 1081 DAQMLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVSVRTASES 1140
Query: 294 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
S ++W D NG P + Y+I R + + VI ++R E +I+
Sbjct: 1141 SLRMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSAL---LKVISDRLER-----ECTIQ 1192
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
+ L W+ YE ++ A N +G G P + T P P + + ++W
Sbjct: 1193 D-LEEWTEYELQIQAFNAIGAG-PWNEVVGVRTRESVPSAPPENVSAEAVSSTQILLTWS 1250
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
+P +QN + YKI ++ K+ D+E +S+T++ GN + + + Y YE++V A
Sbjct: 1251 AVPESEQNGLILGYKILYKAKDLDSEPRSQTVR--GNHTQSCL-LSGLRKYVLYEIRVLA 1307
Query: 468 INDVGPG-PESEVVT 481
+G G P S V+T
Sbjct: 1308 FTRIGDGVPSSPVLT 1322
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 289 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
+V S + W G+ PI ++ + R N W S + + + I
Sbjct: 1441 DVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSI--------SHEATSCII 1492
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+++Y+ +V A N++G + S+ + T D P + PS + + + W+
Sbjct: 1493 ESLNPFTSYKLRVKATNDIGDSDYSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQ 1552
Query: 409 PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEY------GNVGIA 448
P E N + Y+I++R+ KN + ++E + + +
Sbjct: 1553 PPKAESLNGLLLGYRIYYRELDYDAGSATESKAVKNPSALRAELTPQSSFKTVNSSSALT 1612
Query: 449 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483
+ Y YEV + A N +G P S V ++
Sbjct: 1613 TYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVF 1647
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 16/211 (7%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 337
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1330 PGPPIRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVE--VGSTVR 1387
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++T L P S Y F+ A G+GEP + ++P P ++
Sbjct: 1388 QFTATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPQQLTTPQ 1439
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457
+ S+ +P ++P Y+ + R+ + ++Q+ + ++ + F
Sbjct: 1440 SDVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSISHEATSCIIESLNPF- 1498
Query: 458 YTEYEVKVQAINDVGP---GPESEVVTIWHD 485
T Y+++V+A ND+G E+E VT D
Sbjct: 1499 -TSYKLRVKATNDIGDSDYSAETEAVTTLQD 1528
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L + YE + A N +G S+P + A P AP I L ++W+P
Sbjct: 1619 LKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEA-APAMAPQNIQVNSLSASQLELTWDPP 1677
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
P + QN YKI++ + D + +E +K + ++ + + +T Y V + A N
Sbjct: 1678 PADSQNGNIQGYKIYYW-EGDVQNDTEKVKVFSSLR-QLSASKNLTSHTRYLVCISAFNA 1735
Query: 471 VGPGPES 477
G GP S
Sbjct: 1736 AGDGPRS 1742
>sp|P97686|NRCAM_RAT Neuronal cell adhesion molecule OS=Rattus norvegicus GN=Nrcam PE=1
SV=2
Length = 1214
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 203/493 (41%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 379 TLICRANGNPKPRISWLTNGVPVE---IALDDPSRKIDGD---TIMFSNVQESSSAVYQC 432
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 433 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 488
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 489 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 545
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + + P + + C + L +W + + N + ++D
Sbjct: 546 TRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE-------RFSVDK 598
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ +S + V P P P +++
Sbjct: 599 DHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 658
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 659 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQTTAQ 708
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I+W+
Sbjct: 709 LKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVITWK 768
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 769 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 823
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 824 LNDVGFAPEPAAV 836
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 36/283 (12%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L+ C A G+P W + TLP+ +R F ++ T++ ++ E D YQ
Sbjct: 288 LSLECIAEGLPTPVIYWIKE-----DGTLPV---NRTFYRNFKKTLQIIHVSEADSGNYQ 339
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 340 CIAKNALGAVHHTISVTV-KAAPYWIVAPHNLVLSPGENG--TLICRANGNPKPRISWLT 396
Query: 126 DG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 397 NGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAE--- 452
Query: 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETPN 235
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 453 ----PPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDIY 502
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 503 VLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 545
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 49/316 (15%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 58 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 114
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 115 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IILRSGQSLVLPCRPPIGL 173
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 174 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 233
Query: 175 IVL---------------------HGPSYYEQLPPKITIA----AHRN------LQLRCS 203
I L +G ++ PP +H+ L L C
Sbjct: 234 ISLKVISVDELNDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSLECI 293
Query: 204 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 263
A E L W G + +N N L+I + S AD+G Y+C+ K+
Sbjct: 294 A--EGLPTPVIYWIKED---GTLPVNRTFYRNFK---KTLQIIHVSEADSGNYQCIAKNA 345
Query: 264 VGKISTKTTVIVEGPP 279
+G + +V V+ P
Sbjct: 346 LGAVHHTISVTVKAAP 361
>sp|P32004|L1CAM_HUMAN Neural cell adhesion molecule L1 OS=Homo sapiens GN=L1CAM PE=1 SV=2
Length = 1257
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 205/486 (42%), Gaps = 52/486 (10%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED---QDRYFIQDNVLTIRYLNPERDPAMYQCR 67
C+ G P +W NG +P+E+ +Y IQ L + + P D + QC
Sbjct: 354 CQVQGRPQPEVTWRING-------IPVEELAKDQKYRIQRGALILSNVQPS-DTMVTQCE 405
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETY-AGEGGNVTIFCNPEAAPKPKFVW-KK 125
A+N+ ++A + V+ L K +++TY A +G + C AP P W +
Sbjct: 406 ARNRHGLLLANAYIYVVQLPA--KILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDE 463
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
DG + R + NG L I + +D+G Y C A N L V +
Sbjct: 464 DGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQG 523
Query: 186 LPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 243
P+ TI + C A + L + W +G DL EL ++ I+ G L
Sbjct: 524 --PRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDG-----RDLQELGDSDKYFIEDGRL 576
Query: 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH---KTSATIQWT 300
I + ++D G Y CV + + + ++ ++V G PG + + ++H ++ + W+
Sbjct: 577 VIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWS 636
Query: 301 DGATNGRPITHYKI------IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
+ PI Y I +A W S +GK + S L P+
Sbjct: 637 PAEDHNAPIEKYDIEFEDKEMAPEKWYS---------LGK-----VPGNQTSTTLKLSPY 682
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
Y F+V A N+ G GEPS S TP P + P + G G + ++ I+W+PL
Sbjct: 683 VHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMD 742
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP + Y++ WR + E + V + + + + YE+KVQA+N G G
Sbjct: 743 WNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 797
Query: 475 PESEVV 480
PE +V
Sbjct: 798 PEPQVT 803
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 187/489 (38%), Gaps = 56/489 (11%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQ 65
L C A G P T W R S +P DR Q++ T++ L E D Y+
Sbjct: 260 LVLECIAEGFPTPTIKWLRP-----SGPMPA---DRVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 66 CRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK 125
C A+N L + + + V P + +P +S Y G G + C + P+P+ W+
Sbjct: 312 CLAENSLGSARHAYYVTV-EAAPYWLHKP-QSHLY-GPGETARLDCQVQGRPQPEVTWRI 368
Query: 126 DGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183
+G + + + + + G L++S V D+ + C A N HG L++ + Y
Sbjct: 369 NGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-------LLLANAYIYV 421
Query: 184 EQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235
QLP KI A ++ L C A + V ++ +G + +E P
Sbjct: 422 VQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDGTTVLQ---DERFFPY 477
Query: 236 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 295
N G L I + D G Y C+ + ++ + V+ + G + + K +
Sbjct: 478 AN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQITQGPRST-IEKKGS 533
Query: 296 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355
+ +T A+ + W ++ E +G + D+Y + + L
Sbjct: 534 RVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYFIEDGRLVIHSLDYSD 585
Query: 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 415
+ +A EL E + +P P S + + +SW P E
Sbjct: 586 QGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDL--HLLTQSQVRVSWSPA--EDH 641
Query: 416 NAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
NAP Y I + K + +L K GN +++ Y Y +V AIN GPG
Sbjct: 642 NAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPG 698
Query: 475 ---PESEVV 480
P SE V
Sbjct: 699 EPSPVSETV 707
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 46/301 (15%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DNVLTIRYLN---PER 59
D++ CEA G P+V + W R+G P E+ Q TI N +R
Sbjct: 52 DISLKCEASGKPEVQFRWTRDGVHFK----PKEELGVTVYQSPHSGSFTITGNNSNFAQR 107
Query: 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP 119
+Y+C A N+L T S + P + K ++ EG +V + CNP + +P
Sbjct: 108 FQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVE-EGESVVLPCNPPPSAEP 166
Query: 120 KFVWKKDGNI--IGSGGRRKIFENGNLLISPV-SRDDSGIYSCTA--------------- 161
++ + I I R + +NGNL + V + D+ Y C A
Sbjct: 167 LRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPID 226
Query: 162 ---TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218
+ M + K RL+ S + + + L L C A + ++
Sbjct: 227 LRVKATNSMIDRKPRLLFPTNSSSH------LVALQGQPLVLECIAEGFPTPTIKWLRPS 280
Query: 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
G M + + N N LL++ D GEY C+ ++++G V VE
Sbjct: 281 -----GPMPADRVTYQNHNKTLQLLKVGE---EDDGEYRCLAENSLGSARHAYYVTVEAA 332
Query: 279 P 279
P
Sbjct: 333 P 333
>sp|Q3UH53|SDK1_MOUSE Protein sidekick-1 OS=Mus musculus GN=Sdk1 PE=2 SV=1
Length = 2193
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 199/478 (41%), Gaps = 31/478 (6%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
C A GVP T W+++ L+ L++ + L I+ L+PE D ++QC A N
Sbjct: 390 CRAMGVPLPTLQWYKDAVPLSK----LQNPRYKVLPSGGLHIQKLSPE-DSGIFQCFASN 444
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130
+ + L V + P+F +RP++ T +G + C APKP WK+ +I+
Sbjct: 445 EGGEVQTHTYLDVTNIAPAFTQRPVD--TTVTDGMTAVLRCEVSGAPKPAITWKRGNHIL 502
Query: 131 GSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL 186
SG R + E+G L I+PV D+G Y+C A N + L V + S
Sbjct: 503 ASGSVRIPRFMLLESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSIVHPP 562
Query: 187 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
++ I L C A + + Y+W + V I + + + DG L+ I+
Sbjct: 563 EDRVVIKG-TTATLCCGATHDPRTSLRYVWKKDNVVITASSSSRIV---VEKDGSLV-IS 617
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGAT 304
D G+Y C + S G S + V P P + + S T+ W
Sbjct: 618 QTWSGDIGDYTCEIISEGGSDSRTARLEVIELPHPPQNLLASLSPARSHSVTLSWVRPFD 677
Query: 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364
P+ +Y + N NS W V +G E+ T + L P TY+F+V A
Sbjct: 678 GNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEMTGVT-------VSGLTPARTYQFRVCAV 728
Query: 365 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424
N++G G+ S+ + + P + P P I G + + W+P P + N Y +
Sbjct: 729 NQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYIL 788
Query: 425 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481
+R E Q + + + + +T+YE++V A N G G S VT
Sbjct: 789 RYRLAGLPGEHQQRNIS---SPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVT 843
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 39/266 (14%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQC 66
L TC A G + + W RN +SE + +Y I +++ L D Y+C
Sbjct: 104 LVLTCLAEGSWPLEFKWIRN----DSELTTYSSEYKYIIP----SLQKL----DAGFYRC 151
Query: 67 RAKNQ---LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123
+N+ L R S Q+ + +R S+ +A + I + P+P+ W
Sbjct: 152 VVRNRMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIV----SCPQPQVTW 207
Query: 124 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGP 180
++G+ I R I L+I + D+G Y A N + I V
Sbjct: 208 FREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIHLSVARDT 267
Query: 181 SYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 268 GTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL--------- 318
Query: 233 TPNINIDGGLLEITNASFADAGEYEC 258
T ++ G L ITN + AD G Y C
Sbjct: 319 TSGLHSYGRRLTITNPTSADTGMYVC 344
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 189/502 (37%), Gaps = 65/502 (12%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY-FIQDNVLTIRYLNPERDPAMYQCRAK 69
CE G P +W R +L S ++ + R+ ++ L I + + D Y C A
Sbjct: 483 CEVSGAPKPAITWKRGNHILASGSVRI---PRFMLLESGGLRIAPVFIQ-DAGNYTCYAA 538
Query: 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDG 127
N + +SA L V + S P + +G T+ C P+ ++VWKKD
Sbjct: 539 NTEASVNASAMLTVWN-RTSIVHPP--EDRVVIKGTTATLCCGATHDPRTSLRYVWKKDN 595
Query: 128 NIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ 185
+I + +I ++G+L+IS D G Y+C + G D RL V+ P
Sbjct: 596 VVITASSSSRIVVEKDGSLVISQTWSGDIGDYTCEIISEGGSDSRTARLEVIELPH---- 651
Query: 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---VRIGNMDLNELETP----NINI 238
PP+ NL S + ++++ +G V + ++E +P N+
Sbjct: 652 -PPQ-------NLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSENNSPWKVHLSNV 703
Query: 239 DGGLLEITNASFADAGEYE---CVVKST-VGKISTKTTVIV--EGPPGLPGGVQVVEVHK 292
+ +T + A Y+ C V G+ ST+T+ ++ E PP P +V +
Sbjct: 704 GPEMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPK-NIVASGR 762
Query: 293 T--SATIQWT-------DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 343
T S +QW +G G I Y++ + G+ R
Sbjct: 763 TNQSIMVQWQPPPETEHNGVLRGY-ILRYRLAG--------------LPGEHQQRNISSP 807
Query: 344 EAS--IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 401
E + + L+ W+ YE +V A N G G S +Y T P P +
Sbjct: 808 EVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEY-TLQGVPTAPPQNVQAEAVNST 866
Query: 402 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461
+ W P P++ N N YK+ + E + GI I + +T Y
Sbjct: 867 TVHFLWNPPPQQFINGINQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAY 926
Query: 462 EVKVQAINDVGPGPESEVVTIW 483
V G GP S +W
Sbjct: 927 FTSVLCFTTPGDGPPSSPQLVW 948
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1881 AEGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAK 1934
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1935 DIPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1986
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 21/158 (13%)
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 340
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1467 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1524
Query: 341 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 400
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1525 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1574
Query: 401 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 438
+ I W+P E N Y+I++R E +SET
Sbjct: 1575 SSVLIQWQPPRDESLNGLLQGYRIYYR-----ELESET 1607
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 269 TKTTVIVEGPPGLPGGVQVVEVHKTSAT-IQWT---DGATNGRPITHYKIIARTNWNSTW 324
T+ ++ PG P G H TS+ IQW D + NG + Y+I R + T
Sbjct: 1550 TEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL-LQGYRIYYRELESETG 1608
Query: 325 FN------VSEHVIGKEVDRYTGRKEASIENVLVPWST--------YEFKVIAGNELGYG 370
+ S + E+ + K + + L + YE + A N +G
Sbjct: 1609 MSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGES 1668
Query: 371 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430
S P + A P AP + L ++W+P P E QN YK+++ +
Sbjct: 1669 PASVPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKVYYWEA- 1726
Query: 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE 478
D+ ++E +K + VV+I +T+Y + + A N G GP+S+
Sbjct: 1727 DSRNETEKMKVL-FLPEPVVKIKDLTSHTKYLISISAFNAAGDGPKSD 1773
Score = 39.7 bits (91), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 267 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1037 VTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 1092
Query: 324 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 376
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1093 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSS 1145
Query: 377 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 433
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 1146 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 1205
Query: 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
++ + + + I +TEYE+++QA N +G GP SE+V
Sbjct: 1206 ALAQVVSDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELV 1249
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 18/212 (8%)
Query: 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVD 337
PG P + EV T+ I W I Y+I R S F E +G V
Sbjct: 1360 PGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVE--VGATVR 1417
Query: 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1418 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1469
Query: 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 456
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1470 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVERLRP-- 1527
Query: 457 YYTEYEVKVQAINDVGP---GPESEVVTIWHD 485
+T Y+++++A ND+G E+E VT D
Sbjct: 1528 -FTSYKLRLKATNDIGDSDFSAETEAVTTLQD 1558
>sp|Q810U4|NRCAM_MOUSE Neuronal cell adhesion molecule OS=Mus musculus GN=Nrcam PE=1 SV=2
Length = 1256
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 199/493 (40%), Gaps = 55/493 (11%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN-PERDPAMYQC 66
T C A G P SW NG + + L+D R D TI + N E A+YQC
Sbjct: 373 TLICRANGNPKPRISWLTNGVPIE---IALDDPSRKIDGD---TIIFSNVQESSSAVYQC 426
Query: 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESET--YAGEGGNVTIF-CNPEAAPKPKFVW 123
A N+ ++A + VL P R L S Y + C +P P W
Sbjct: 427 NASNKYGYLLANAFVNVLAEPP----RILTSANTLYQVIANRPALLDCAFFGSPMPTIEW 482
Query: 124 KKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180
K GS I+ +NG L I +D +G Y+C A N GM +++ L + P
Sbjct: 483 FKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI-KDP 539
Query: 181 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240
+ + P + + C + L +W + + N + + D
Sbjct: 540 TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE-------RFSTDK 592
Query: 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEV 290
L +++ D G Y C +T+ S + V P P P +++
Sbjct: 593 DHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPTPTPAPIYDVPNPPFDLELTNQ 652
Query: 291 HKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIE 348
S + WT G N PIT + I + W + +E + + +
Sbjct: 653 LDKSVQLTWTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQTTAQ 702
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
L P+ Y F+V+A N +G PS S QY T A +P Q P + G G + +L I+W+
Sbjct: 703 LKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVITWK 762
Query: 409 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 467
PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQA
Sbjct: 763 PLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQA 817
Query: 468 INDVGPGPESEVV 480
+NDVG PE V
Sbjct: 818 LNDVGFAPEPAAV 830
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 113/284 (39%), Gaps = 38/284 (13%)
Query: 7 LTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NVLTIRYLNPERDPAMY 64
L+ C A G+P W + +L + +R F ++ L I +++ E D Y
Sbjct: 282 LSLECIAEGLPTPIIYWIKEDGMLPA--------NRTFYRNFKKTLQITHVS-EADSGNY 332
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124
QC AKN L + + + V P + P GE G T+ C PKP+ W
Sbjct: 333 QCIAKNALGAVHHTISVTV-KAAPYWIVAPQNLVLSPGENG--TLICRANGNPKPRISWL 389
Query: 125 KDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
+G I RKI + ++ S V S +Y C A+N +G + + VL
Sbjct: 390 TNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVL---- 444
Query: 182 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-------HNGVRIGNMDLNELETP 234
PP+I +A N + A+ LLD A+ + G + + E
Sbjct: 445 ---AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMPTIEWFKGTKGSALH----EDI 495
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ D G LEI A G Y CV ++ +G + + ++ P
Sbjct: 496 YVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDP 539
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 124/311 (39%), Gaps = 39/311 (12%)
Query: 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLN---P 57
+D + ++ CEA G P ++SW RNG + + PL L I ++
Sbjct: 52 IDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKP---GSGTLVINIMSEGKA 108
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E +YQC A+N+ S+ + + P + K LE G ++ + C P
Sbjct: 109 ETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKERLEP-IVLQNGQSLVLPCRPPIGL 167
Query: 118 KPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRL 174
P ++ D + ++ + NG+L S V +D+ Y C A H + +
Sbjct: 168 PPAIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYICYARFNHTQTIQQKQP 227
Query: 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW-----THNGVRIGNMDLN 229
I L S E TIAA+ + A + + ++ +H GN+
Sbjct: 228 ISLKVISVDEL---NDTIAANLSDTEFYGAKSSKERPPTFLTPEGNESHKEELRGNVLSL 284
Query: 230 E-----LETPN---INIDGGL-------------LEITNASFADAGEYECVVKSTVGKIS 268
E L TP I DG L L+IT+ S AD+G Y+C+ K+ +G +
Sbjct: 285 ECIAEGLPTPIIYWIKEDGMLPANRTFYRNFKKTLQITHVSEADSGNYQCIAKNALGAVH 344
Query: 269 TKTTVIVEGPP 279
+V V+ P
Sbjct: 345 HTISVTVKAAP 355
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 16/135 (11%)
Query: 282 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 843 PGNVRVSVVNSTLAEVHWDPVPPKSVRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 895
Query: 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394
++ + G K + L P+S Y V N G G P+S ++TP P APS +
Sbjct: 896 KILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEG-PASTDRGFHTPEGVP-SAPSSLK 953
Query: 395 GGGGKIGDLSISWEP 409
+ L++ W+P
Sbjct: 954 IVNPTLDSLTLEWDP 968
>sp|Q90478|L1CA1_DANRE Neural cell adhesion molecule L1.1 (Fragment) OS=Danio rerio
GN=nadl1.1 PE=2 SV=1
Length = 1197
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 204/500 (40%), Gaps = 68/500 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLEDQD---RYFIQDNVLTIRYLNPERDPAMYQCR 67
C+A G+P +W NG +P+ D R + L + + D A+YQC
Sbjct: 289 CKADGIPAPNITWSING-------VPVSGTDVDPRRRVSSGKLILSNVE-FSDTAVYQCE 340
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG 127
A N+ + + + V+ L P+ P E A G V + C +P PK W+
Sbjct: 341 AVNKHGSILINTHVHVVEL-PAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEILD 399
Query: 128 NIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI---VLHGPSYY 183
+I S + NG+L IS VS +DS Y+C+ + + + ++ + GP
Sbjct: 400 SIPALSNAKISQTTNGSLKISNVSEEDSNRYTCSVSETNKSISADVEVLNRTKIVGP--- 456
Query: 184 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRI----GNMDLNELETPNINI 238
P + + + L C + L + W +G +I N +E+E
Sbjct: 457 ---PQNLHVIRGSDAILHCKYTVDHNLKSPTVQWNKDGHKITASTSNDKYHEIE------ 507
Query: 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298
G L++ + D G Y C V +T+ + + V+ P P +++ E + S TI
Sbjct: 508 --GSLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITVQDKPDPPQSLKLSEKMERSVTIS 565
Query: 299 WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW---- 354
W N P+T Y I E G+ D +K S+ + W
Sbjct: 566 WMPSVENNSPVTEYVI--------------EMNEGETPDEGQWQKYRSVSQDIDSWRSIC 611
Query: 355 --STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412
S Y F++ A N +G P+ S Y+TPA KP P + + ISW+ + R
Sbjct: 612 SYSKYHFQIRAVNSIGTSAPTESSLSYSTPAAKPDTNPENVMTLSTDPKSMIISWQEMDR 671
Query: 413 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 472
+ N P YK+FWR+ D S +V + + + + +E+KVQA+ND+G
Sbjct: 672 RQFNGPGFQYKVFWRRAAD----SGAHWTESSVSNPPLMVNNTGTFVSFEIKVQAVNDLG 727
Query: 473 PGPESEVVTIWHDPLVIISY 492
PE PL +I Y
Sbjct: 728 AAPE---------PLTVIGY 738
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 27/297 (9%)
Query: 25 RNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQLRVL 84
R+G L + + + +D Y + + + P+ ++Y + + +K R R
Sbjct: 123 RDGNLYFANLIANDSRDDYTCNAHYINASIILPKEPMSIYVTPSNSVVKNR------RAK 176
Query: 85 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL 144
P+ + S G +T+ C PE P P+ W + + + +K++ N L
Sbjct: 177 LHHPAGAR----SSYLVLRGQTLTLQCIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWL 232
Query: 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204
I V D G Y CTA N + + V P Y+ + P + A ++L C A
Sbjct: 233 QIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAP-YWTRSPEEHLYAPGETVRLDCKA 291
Query: 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264
++ W+ NGV + D++ P + G L ++N F+D Y+C +
Sbjct: 292 DGIPAPNIT--WSINGVPVSGTDVD----PRRRVSSGKLILSNVEFSDTAVYQCEAVNKH 345
Query: 265 GKISTKTTV-IVEGPPGLPGGVQVVEVHKTSATIQWT---DGATNGRPI--THYKII 315
G I T V +VE LP + + AT T D T G P+ H++I+
Sbjct: 346 GSILINTHVHVVE----LPAQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL 398
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 150/400 (37%), Gaps = 78/400 (19%)
Query: 119 PKFVWKKDGN-IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
P W KDG+ I S K E G+L + V +D GIYSC + D + G + V
Sbjct: 483 PTVQWNKDGHKITASTSNDKYHEIEGSLKVLDVQMEDMGIYSCEVSTTLDSDTASGYITV 542
Query: 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY---IWTHNGVRIGNMDLNELET 233
P PP+ L+ S E + +++ + ++ V +++NE ET
Sbjct: 543 QDKPD-----PPQ---------SLKLSEKMERSVTISWMPSVENNSPVTEYVIEMNEGET 588
Query: 234 PNINIDGGLLEITNASFADAGEYECV------------VKSTVGKISTKTTVIVEGPPGL 281
P D G + + D + + V S T++++ P
Sbjct: 589 P----DEGQWQKYRSVSQDIDSWRSICSYSKYHFQIRAVNSIGTSAPTESSLSYSTPAAK 644
Query: 282 PG----GVQVVEVHKTSATIQW--TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
P V + S I W D P YK+ R +
Sbjct: 645 PDTNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWR----------------RA 688
Query: 336 VDRYTGRKEASIEN--VLV----PWSTYEFKVIAGNELGYGEPSSPSPQY---NTPADKP 386
D E+S+ N ++V + ++E KV A N+LG ++P P + D P
Sbjct: 689 ADSGAHWTESSVSNPPLMVNNTGTFVSFEIKVQAVNDLG----AAPEPLTVIGYSGEDFP 744
Query: 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNV 445
+APS + + + + W P+ E + YKI+ R K E + GN
Sbjct: 745 LEAPSALSVTELQKTSVMVRWSPVRPESVRGHLLGYKIYLRMKGSQWETPGRAVSSSGNP 804
Query: 446 GI------AVVRIPSEF-YYTEYEVKVQAINDVGPGPESE 478
+ A +I S+ +Y++Y + + A N G GP SE
Sbjct: 805 TVIEVPADAAEKIVSDLQFYSDYTLTITAFNSKGEGPHSE 844
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 111/293 (37%), Gaps = 61/293 (20%)
Query: 17 PDVTYSWFRNGE-----LLNSETL-PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKN 70
P ++ W ++G+ L S TL P D +F Q Y+C A N
Sbjct: 7 PSPSFRWVKDGKQFGEVLSESGTLTPHPTMDLHFYQ---------------GTYRCYAAN 51
Query: 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVW-KKDGN 128
+L T S+ PS K + G + + CN P+++ PK W +
Sbjct: 52 ELGTAVSNLVHLTTEPVPSLAKVKKQKRRAYEVGESAVLRCNPPKSSVTPKIHWMDMQFH 111
Query: 129 IIGSGGRRKIFENGNL----LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYE 184
I R I +GNL LI+ SRDD Y+C N H ++ S I+L
Sbjct: 112 HIPLNERVTISRDGNLYFANLIANDSRDD---YTC---NAHYINAS----IILPKEPMSI 161
Query: 185 QLPPKITIAAHRNLQLR--CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN---ID 239
+ P ++ +R +L A + L+ T + G L TP ++ ID
Sbjct: 162 YVTPSNSVVKNRRAKLHHPAGARSSYLVLRGQTLTLQCIPEG------LPTPEVHWDRID 215
Query: 240 GGL-------------LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
L L+I N +D GEY C +++ + TV VE P
Sbjct: 216 SALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARNSENSVKHHYTVTVEAAP 268
>sp|O97394|SDK_DROME Protein sidekick OS=Drosophila melanogaster GN=sdk PE=1 SV=2
Length = 2224
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 200/492 (40%), Gaps = 49/492 (9%)
Query: 10 TCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMYQCRA 68
TC+ G P WFRN E +++ + RY + DN L I+ L + D AM+QC A
Sbjct: 381 TCDVVGEPTPQVKWFRNAESVDAHI----ESGRYTLNTDNTLVIKKLILD-DAAMFQCLA 435
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW-KKDG 127
N+ +S LRV T P + P A +G + TI C +P P W +
Sbjct: 436 INEAGENSASTWLRVKTSAPIMELPP--QNVTALDGKDATISCRAVGSPNPNITWIYNET 493
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
++ R +I E+G+LLIS + D+G+Y C N G + + L VL Q P
Sbjct: 494 QLVDISSRVQILESGDLLISNIRSVDAGLYICVRANEAGSVKGEAYLSVLVRTQII-QPP 552
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247
T+ L+C ++ + W G + ++ + + DG L EI
Sbjct: 553 VDTTVLLGLTATLQCKVSSDPSVPYNIDWYREGQ--SSTPISNSQRIGVQADGQL-EIQA 609
Query: 248 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV---VEVHKTSATIQWTDGAT 304
+D G Y CVV S G + + V P P V+V E + S + WT G
Sbjct: 610 VRASDVGSYACVVTSPGGNETRAARLSVIELPFPPSNVKVERLPEPQQRSINVSWTPGFD 669
Query: 305 NGRPITHYKIIAR----------------TNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 348
PI+ + I R NW + NVS ++ +E
Sbjct: 670 GNSPISKFIIQRREVSELEKFVGPVPDPLLNWITELSNVS-----------ADQRWILLE 718
Query: 349 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 408
N L + Y+F+V A N +G G PS PS P + P P G + ++ W+
Sbjct: 719 N-LKAATVYQFRVSAVNRVGEGSPSEPSNVVELPQEAPSGPPVGFVGSARSMSEIITQWQ 777
Query: 409 PLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466
P E +N + Y + +R N+ + + + + + + +Y V++
Sbjct: 778 PPLEEHRNGQILGYILRYRLFGYNNVPWSYQNITNEAQRNFLIQEL---ITWKDYIVQIA 834
Query: 467 AINDVGPGPESE 478
A N++G G +E
Sbjct: 835 AYNNMGVGVYTE 846
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 10/193 (5%)
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GG 134
SA R+ L+P P+ +ET+ GG V + C+ P P+ W ++ + + G
Sbjct: 349 SASARLQILEPPLFFTPMRAETFGEFGGQVQLTCDVVGEPTPQVKWFRNAESVDAHIESG 408
Query: 135 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 194
R + + L+I + DD+ ++ C A N G + + L V E P +T
Sbjct: 409 RYTLNTDNTLVIKKLILDDAAMFQCLAINEAGENSASTWLRVKTSAPIMELPPQNVTALD 468
Query: 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 254
++ + C A ++ +I+ L ++ + ++ G L I+N DAG
Sbjct: 469 GKDATISCRAVGSPNPNITWIYNET-------QLVDISSRVQILESGDLLISNIRSVDAG 521
Query: 255 EYECVVKSTVGKI 267
Y CV + G +
Sbjct: 522 LYICVRANEAGSV 534
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 19/259 (7%)
Query: 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP----PGLPGG 284
+ L++ N+ D L + +E V + VG KT I G P P
Sbjct: 1013 DTLKSFNLTADDTELTVNQLQATTHYWFEIVAWTRVGSGIPKTATIQSGVEPVLPHAPTA 1072
Query: 285 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE-HVIGKEVDRYTGRK 343
+ + + S +Q+T G IT +K+ +T N TWF + E + E TG
Sbjct: 1073 LALSNIEAFSVVLQFTPGFDGNSSITKWKVEGQTARNMTWFTICEINDPDAETLTVTG-- 1130
Query: 344 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 403
LVP++ Y ++ A N +G +PS + + T +P P + L
Sbjct: 1131 -------LVPFTQYRLRLSASNVVGSSKPSEATKDFQTIQARPKHPPFNVTVRAMSAQQL 1183
Query: 404 SISWEPLPREK----QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459
+ W PL + + NI YK + ++ ++ + + V + S +T
Sbjct: 1184 RVRWIPLQQTEWYGNPRGYNISYKQLVKTPGTIKYVPRSVVIEDHTANSHV-LDSLEEWT 1242
Query: 460 EYEVKVQAINDVGPGPESE 478
YEVK+ A NDVG ES+
Sbjct: 1243 LYEVKMNACNDVGCSKESD 1261
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 142/383 (37%), Gaps = 50/383 (13%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLED--QDRYFIQDNVLTIRYLNPER-DPAMYQCR 67
C A G P TY W ++G +P+ D +++ R+ + R D YQC
Sbjct: 95 CHALGYPQPTYRWLKDG-------VPVGDFSSSQFY--------RFHSTRREDAGSYQCI 139
Query: 68 AKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP--EAAPKPKFVWKK 125
A+N + +S V+ F+ T G+ IF P E+ P P +W+
Sbjct: 140 ARNDAGSIFSEKSDVVVAYMGIFENTTEGRLTVI--SGHPAIFDMPPIESIPVPSVMWQS 197
Query: 126 DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH-GMDESKGRLIVLHGPSYYE 184
+ + + L+I +D Y A N G +ES + + Y
Sbjct: 198 EDGPLNYDIKYAFTHANQLIILSADENDRKGYRAKAINTQLGKEESSAFVHLNVSGDPYI 257
Query: 185 QLPPKITIAAH--------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236
++ P+I + ++L+C A+ L ++ +W +G+ + +
Sbjct: 258 EVAPEIIVRPQDVKVKVGTGVVELQCIANARPLHELETLWLKDGLAVETAGVRHTLNDPW 317
Query: 237 NIDGGLLEITNASFADAGEYECVVKSTVG---KISTKTTVIVEGPPGLPGGVQVVEVHKT 293
N LL+ A+ + +GEY C V+ G +S + + PP ++ +
Sbjct: 318 NRTLALLQ---ANSSHSGEYTCQVRLRSGGYPAVSASARLQILEPPLFFTPMRAETFGEF 374
Query: 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-EVDRYTGRKEAS-IENVL 351
+Q T G P K WF +E V E RYT + + + L
Sbjct: 375 GGQVQLTCDVV-GEPTPQVK----------WFRNAESVDAHIESGRYTLNTDNTLVIKKL 423
Query: 352 VPWSTYEFKVIAGNELGYGEPSS 374
+ F+ +A NE G S+
Sbjct: 424 ILDDAAMFQCLAINEAGENSAST 446
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELL---NSETLPLEDQDRYFIQDNVLTIRYLNPERDPA 62
D T +C A G P+ +W N L +S LE D + N+ ++ D
Sbjct: 471 DATISCRAVGSPNPNITWIYNETQLVDISSRVQILESGD--LLISNIRSV-------DAG 521
Query: 63 MYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF- 121
+Y C N+ + A L VL ++ + P+++ G T+ C + P +
Sbjct: 522 LYICVRANEAGSVKGEAYLSVL-VRTQIIQPPVDTTVLLGL--TATLQCKVSSDPSVPYN 578
Query: 122 -VWKKDGNI---IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177
W ++G I + R + +G L I V D G Y+C T+ G + RL V+
Sbjct: 579 IDWYREGQSSTPISNSQRIGVQADGQLEIQAVRASDVGSYACVVTSPGGNETRAARLSVI 638
Query: 178 HGP 180
P
Sbjct: 639 ELP 641
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 22/118 (18%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147
P F P S + EG + C+ P+P + W KDG +G + +
Sbjct: 72 PRFTTHPSSSGSIVSEGSTKILQCHALGYPQPTYRWLKDGVPVGDFSSSQFYR-----FH 126
Query: 148 PVSRDDSGIYSCTATNVHGM-----------------DESKGRLIVLHGPSYYEQLPP 188
R+D+G Y C A N G + ++GRL V+ G +PP
Sbjct: 127 STRREDAGSYQCIARNDAGSIFSEKSDVVVAYMGIFENTTEGRLTVISGHPAIFDMPP 184
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 78/205 (38%), Gaps = 25/205 (12%)
Query: 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335
E PG+P V +V T A I W I Y++ N S N S
Sbjct: 1371 EDTPGVPSNVSFPDVSLTMARIIWDVPVDPNGKILAYQVTYTLN-GSAMLNYSREF--PP 1427
Query: 336 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395
DR E L+P Y F A LG+G+ ++ ++P QAPS
Sbjct: 1428 SDRTFRATE------LLPGKYYSFSCTAQTRLGWGKIATALVYTTNNRERP-QAPSVPQI 1480
Query: 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ------SETLKEYGNVGIAV 449
+I I++ P AP YY + R+ N+ +Q +L + VG+
Sbjct: 1481 SRSQIQAHQITFSWTPGRDGFAPLRYYTVEMRE-NEGRWQPLPERVDPSLSSFTAVGLRP 1539
Query: 450 VRIPSEFYYTEYEVKVQAINDVGPG 474
Y Y+ ++QA ND+GP
Sbjct: 1540 --------YMTYQFRIQATNDLGPS 1556
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 44/240 (18%)
Query: 269 TKTTVIVEGPPGLP----GGVQVVEVHKTSATIQWT---------DGATNGRPITHYKII 315
++ +VIV P P GG++VV + TS +QW+ D +T G I + ++
Sbjct: 1559 SRESVIVRTLPAAPAVGVGGLKVVPITTTSVRVQWSALETALWNGDASTGGYRILYQQL- 1617
Query: 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 375
+ F + K D + + + + + L YE V+ N G G + P
Sbjct: 1618 -------SDFPTALQSTPK-TDVHGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPP 1669
Query: 376 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW--------- 426
+ Y A P P + ++ + W+P + QN + YKI++
Sbjct: 1670 AAVYVGEA-VPTGEPRAVDAAPISSTEVRLLWKPPKQSMQNGDILGYKIYYLVTYSPQAL 1728
Query: 427 ---RK-KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482
RK + + E S T + V + +TEY +++ A N G GP S +T+
Sbjct: 1729 EPGRKWEEEIEVVSATATSHSLVFLD--------KFTEYRIQLLAFNPAGDGPRSAPITV 1780
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 100/244 (40%), Gaps = 31/244 (12%)
Query: 256 YECVVKSTVG--KISTK---TTVIVEGP--PGLPGGVQVVEVHKTSATIQWTDGATNGRP 308
+ C ++ +G KI+T TT E P P +P + ++ T WT G P
Sbjct: 1445 FSCTAQTRLGWGKIATALVYTTNNRERPQAPSVPQ-ISRSQIQAHQITFSWTPGRDGFAP 1503
Query: 309 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 368
+ +Y + R N W + E V + +T L P+ TY+F++ A N+LG
Sbjct: 1504 LRYYTVEMREN-EGRWQPLPERV-DPSLSSFTAVG-------LRPYMTYQFRIQATNDLG 1554
Query: 369 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI-----GDLSISWEPLPREKQN--APNIY 421
PS+ S + P AP+ +G GG K+ + + W L N A
Sbjct: 1555 ---PSAFSRESVIVRTLP-AAPA-VGVGGLKVVPITTTSVRVQWSALETALWNGDASTGG 1609
Query: 422 YKIFWRKKND--TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV 479
Y+I +++ +D T QS + + V + YE+ V N GPGP +
Sbjct: 1610 YRILYQQLSDFPTALQSTPKTDVHGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPP 1669
Query: 480 VTIW 483
++
Sbjct: 1670 AAVY 1673
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 293 TSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352
+S + W +G + PI Y I A+ +S W + + G D ++L+
Sbjct: 1899 SSVEMHWINGPSGRGPILGYLIEAKKRDDSRWTKIEQTRKGMMQDFTVSY------HILM 1952
Query: 353 PWSTYEFKVIAGNELGYGEP 372
P + Y F+VIA N G P
Sbjct: 1953 PSTAYTFRVIAYNRYGISFP 1972
>sp|Q03696|NGCA_CHICK Neuronal-glial cell adhesion molecule OS=Gallus gallus PE=1 SV=2
Length = 1266
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 193/480 (40%), Gaps = 46/480 (9%)
Query: 11 CEAFGVPDVTYSWFRNGELLNSETLPLE--DQDRYFIQDNVLTIRYLNPERDPAMYQCRA 68
CE G P W NG +P+E +R +++ L + L P D A+ QC A
Sbjct: 348 CEVGGKPRPQIQWSING-------VPIEAAGAERRWLRGGALVLPELRPN-DSAVLQCEA 399
Query: 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG- 127
+N+ ++A L V+ L P E E V + C AP P W
Sbjct: 400 RNRHGPLLANAFLHVVEL-PLRMLTADEQRYEVVENQTVFLHCRTFGAPAPNVEWLTPTL 458
Query: 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 187
R +F NG+L +S V D G+Y+C A N H + S L+ + P+ P
Sbjct: 459 EPALQDDRSFVFTNGSLRVSAVRGGDGGVYTCMAQNAHS-NGSLTALLEVRAPTRISAPP 517
Query: 188 PKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGVRIGNMDLNELETPNINIDGGLLEIT 246
T + C A + + + W G + + P ++ + ++
Sbjct: 518 RSATAKKGETVTFHCGATFDPAVTPGELRWLRGGQPLPD-------DPRYSV-AAEMTVS 569
Query: 247 NASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGGVQVVEVHKTSATIQWTDGATN 305
N + D G +C + + + + V G PP +QV+EV + + WT G +
Sbjct: 570 NVDYGDEGTIQCRASTPLDSAEAEAQLRVVGRPPSR--DLQVMEVDEHRVRLSWTPGDDH 627
Query: 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN-----VLVPWSTYEFK 360
PI F V E +++ R G + + L P+ + F+
Sbjct: 628 NSPIEK-------------FVVEEEEEREDLQRGFGAADVPGQPWTPPLPLSPYGRFPFR 674
Query: 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 420
V+A N G GE +PS TP P + P + G G + G+L I+WEPLP + NAP
Sbjct: 675 VVAVNAYGRGEHHAPSAPIETPPAAPERNPGGVHGEGNETGNLVITWEPLPPQAWNAPWA 734
Query: 421 YYKIFWRKKNDTEFQSETLKEY---GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477
Y++ WR + + V V + ++ ++++VQA+N G GPE+
Sbjct: 735 RYRVQWRPLEEPGGGGPSGGFPWAESTVDAPPVVVGGLPPFSPFQIRVQAVNGAGKGPEA 794
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 18/226 (7%)
Query: 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP 117
E D Y+C A+N T + + V P + +RP +S + G G + C P
Sbjct: 298 ESDDGEYECVAENGRGTARGTHSVTV-EAAPYWVRRP-QSGVF-GPGETARLDCEVGGKP 354
Query: 118 KPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176
+P+ W +G I +G R+ G L++ + +DS + C A N HG + L V
Sbjct: 355 RPQIQWSINGVPIEAAGAERRWLRGGALVLPELRPNDSAVLQCEARNRHGPLLANAFLHV 414
Query: 177 LHGP----SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232
+ P + EQ + + ++ + L C +V ++ ++ +
Sbjct: 415 VELPLRMLTADEQ---RYEVVENQTVFLHCRTFGAPAPNVEWL-------TPTLEPALQD 464
Query: 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278
+ G L ++ D G Y C+ ++ S + V P
Sbjct: 465 DRSFVFTNGSLRVSAVRGGDGGVYTCMAQNAHSNGSLTALLEVRAP 510
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 103/295 (34%), Gaps = 41/295 (13%)
Query: 6 DLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DNVLTIRYLNPERDPAMY 64
D+ C A G P V Y W R + +P E + L I R +
Sbjct: 53 DIVLKCVATGNPPVQYRWSREDQPF----VPEEHGGVSVVPGSGTLVINATLAARLQGRF 108
Query: 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKR---PLESETYAGEGGNVTIFCN-PEAAPKPK 120
+C A N L T S + P + K P+E E EG V + C+ PE+A PK
Sbjct: 109 RCFATNALGTAVSPEANVIAENTPQWPKEKVTPVEVE----EGDPVVLPCDPPESAVPPK 164
Query: 121 FVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATNVHGMDESKGRLIVLH 178
W D I R + ++GNL S DS Y C A H + R I+
Sbjct: 165 IYWLNSDIVHIAQDERVSMGQDGNLYFSNAMVGDSHPDYICHA---HFLGP---RTIIQK 218
Query: 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN- 237
P P + L L T I G + L TP +
Sbjct: 219 EPLDLRVAPSNAVRSRRPRLLLPRDPQT------TTIALRGGSVVLECIAEGLPTPWVRW 272
Query: 238 -------IDGGL------LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279
+ GG+ L + + +D GEYECV ++ G +V VE P
Sbjct: 273 RRLNGPLLPGGVGNFNKTLRLWGVTESDDGEYECVAENGRGTARGTHSVTVEAAP 327
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 77/206 (37%), Gaps = 16/206 (7%)
Query: 18 DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77
D S ++G L S + + Y + L R + +++P + N +++R
Sbjct: 178 DERVSMGQDGNLYFSNAMVGDSHPDYICHAHFLGPRTII-QKEPLDLRVAPSNAVRSR-- 234
Query: 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK 137
R L P R ++ T A GG+V + C E P P W++ + GG
Sbjct: 235 ----RPRLLLP----RDPQTTTIALRGGSVVLECIAEGLPTPWVRWRRLNGPLLPGGVGN 286
Query: 138 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 197
N L + V+ D G Y C A N G + V P Y+ + P
Sbjct: 287 F--NKTLRLWGVTESDDGEYECVAENGRGTARGTHSVTVEAAP-YWVRRPQSGVFGPGET 343
Query: 198 LQLRCSAHTEELLDVAYIWTHNGVRI 223
+L C + + W+ NGV I
Sbjct: 344 ARLDCEVGGKPRPQIQ--WSINGVPI 367
>sp|A4IFW2|PTPRF_DANRE Receptor-type tyrosine-protein phosphatase F OS=Danio rerio
GN=ptprf PE=2 SV=1
Length = 1909
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 203/488 (41%), Gaps = 47/488 (9%)
Query: 8 TWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67
++ C+A G P +W + G+ ++S+ + + D +VL I+ L RD A+Y+C
Sbjct: 53 SFVCQAAGEPKPRITWMKKGKKVSSQRFEVIEFDDG--SGSVLRIQPLRTHRDEAIYECT 110
Query: 68 AKNQLKTRYSSAQLRVL---TLKPSFKKRPLESETYAGEGG-NVTIFCNPEAAPKPKFVW 123
A N L +SA+L VL + F + + E T+ C P P+ W
Sbjct: 111 ATNSLGEINTSAKLTVLEENQIPHGFPTIDMGPQLKVVERTRTTTMLCAASGNPDPEITW 170
Query: 124 KKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181
KD I GR K +G L I D G Y C ATN G S + +
Sbjct: 171 FKDFLPVDINGNGRIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVR--- 227
Query: 182 YYEQLPPKITIAAHRN-------LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234
++PP+ +I + + L C A + V ++ G ++L + E
Sbjct: 228 -VRRVPPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWM-------TGEVELTKDE-- 277
Query: 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 294
+ + +LE+TN + Y CV S++G I V V+ P P + V E TS
Sbjct: 278 EMPVGRNVLELTN--IRQSTNYTCVAISSLGMIEATAQVSVKALPKPPTSLTVTETTATS 335
Query: 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354
T+ W G N P+++Y I R + T F + V G RY SI L P+
Sbjct: 336 VTLTWDSG--NPEPVSYYIIQYRAKTSDTNF---QEVDGVATTRY------SIGG-LSPY 383
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
S YEF+V+A N +G G PS P + T P P + + + WE P E+
Sbjct: 384 SEYEFRVMAVNNIGRGPPSEPV-ETRTGEQAPSSPPLHVQARMLSASTMLVQWE--PPEE 440
Query: 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 474
N Y+I++ D + +++ + I S Y ++V VG G
Sbjct: 441 PNGQIRGYRIYYTSDLDAPLSA--WQKHNTDDSRLTTISSLTTGITYSLRVLGFTSVGDG 498
Query: 475 PESEVVTI 482
P S+V+ +
Sbjct: 499 PPSDVLQV 506
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 169/420 (40%), Gaps = 76/420 (18%)
Query: 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGN--- 143
P+F + P E +T GG + C PKP+ W K G + S I F++G+
Sbjct: 35 PNFVRSP-EDQT-GISGGVASFVCQAAGEPKPRITWMKKGKKVSSQRFEVIEFDDGSGSV 92
Query: 144 LLISPV-SRDDSGIYSCTATNVHGMDESKGRLIVL------HGPSYYEQLPPKITIAAHR 196
L I P+ + D IY CTATN G + +L VL HG + P + R
Sbjct: 93 LRIQPLRTHRDEAIYECTATNSLGEINTSAKLTVLEENQIPHGFPTIDMGPQLKVVERTR 152
Query: 197 NLQLRCSAHTEELLDVAYIWTHNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGE 255
+ C+A ++ + V I GN + +L + G L+I N+ +D G+
Sbjct: 153 TTTMLCAASGNPDPEITWFKDFLPVDINGNGRIKQLRS-------GALQIENSEESDQGK 205
Query: 256 YECVVKSTVG-KISTKTTVIVEG---------PPG----LPGGVQVVEVHKTSATIQWTD 301
YECV ++ G + S + V PP +PGG V+ T +
Sbjct: 206 YECVATNSAGTRYSAPANLYVRVRRVPPRFSIPPTNHEVMPGG----SVNLTCVAV---- 257
Query: 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 361
G P+ + K W E + K+ + GR + N+ + +
Sbjct: 258 ----GAPMPYVK----------WMT-GEVELTKDEEMPVGRNVLELTNIR---QSTNYTC 299
Query: 362 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 421
+A + LG E ++ P KP P+ + ++++W+ P Y
Sbjct: 300 VAISSLGMIEATAQVSVKALP--KP---PTSLTVTETTATSVTLTWD----SGNPEPVSY 350
Query: 422 YKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480
Y I +R K +DT FQ E V I Y+EYE +V A+N++G GP SE V
Sbjct: 351 YIIQYRAKTSDTNFQ-----EVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSEPV 405
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 410
L P + Y+F + A +E+G G + P + T P P + + +SW
Sbjct: 572 LKPDTLYKFSLAARSEMGQGVFTHPI-EARTAQSAPSAPPQDVHLLSLSSTSIKVSWVAP 630
Query: 411 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
P ++ + Y + ++ N + + + + G + V E +TEY+V V+A D
Sbjct: 631 PAASRHGAIVRYTVSYQAVNGEDTERHEVPDIGADASSCVLEGLE-KWTEYQVWVRAHTD 689
Query: 471 VGPGPESEVVTI 482
VGPGPES V I
Sbjct: 690 VGPGPESTAVRI 701
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 414
+TY F + A N G GE TP D P P + G ++WEP +
Sbjct: 886 ATYSFHLSARNRAGLGEEYVKD--IGTPEDVPSGFPLNLQVVGLTTSTTRLTWEPPALSE 943
Query: 415 QNAPNIYYKIFWR----KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470
+N I+Y + +R K+N T S+T + I +R P T Y+++VQA
Sbjct: 944 RNGRIIHYIVVYRDINSKQNSTNRTSDT-----QMTIQGLR-PD----TTYDIRVQAFTS 993
Query: 471 VGPGPESEVV---TIWHDPLVIISYVCQGDLK 499
G GP S + T+ P S+ + +K
Sbjct: 994 KGGGPISPSIQSRTMSTSPAFATSFGVKAVMK 1025
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,914,723
Number of Sequences: 539616
Number of extensions: 10050890
Number of successful extensions: 23254
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 420
Number of HSP's that attempted gapping in prelim test: 16918
Number of HSP's gapped (non-prelim): 3415
length of query: 505
length of database: 191,569,459
effective HSP length: 122
effective length of query: 383
effective length of database: 125,736,307
effective search space: 48157005581
effective search space used: 48157005581
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)