Query psy14886
Match_columns 505
No_of_seqs 263 out of 2781
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 23:20:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jll_A NCAM2, neural cell adhe 100.0 1.3E-45 4.5E-50 349.3 41.7 365 98-486 9-386 (389)
2 2jll_A NCAM2, neural cell adhe 100.0 8.6E-39 2.9E-43 302.5 34.4 353 2-381 13-384 (389)
3 2v5y_A Receptor-type tyrosine- 100.0 1.5E-38 5E-43 324.2 37.3 442 3-485 90-562 (731)
4 3b43_A Titin; I-SET IG fold, e 100.0 2.9E-36 1E-40 298.5 40.6 430 1-477 17-469 (570)
5 3b43_A Titin; I-SET IG fold, e 100.0 1.9E-36 6.6E-41 299.8 36.4 341 2-371 114-467 (570)
6 2v5y_A Receptor-type tyrosine- 100.0 4E-34 1.4E-38 291.5 39.4 356 104-485 91-458 (731)
7 1e07_A Carcinoembryonic antige 100.0 5.4E-33 1.8E-37 280.1 46.7 414 1-482 215-638 (642)
8 1e07_A Carcinoembryonic antige 100.0 4.4E-32 1.5E-36 273.4 47.0 412 1-476 123-548 (642)
9 3kld_A Contactin 4, axcam, BIG 100.0 5.1E-34 1.8E-38 268.5 30.4 338 2-371 21-374 (384)
10 3dmk_A DOWN syndrome cell adhe 100.0 1.1E-33 3.9E-38 292.9 34.8 441 1-482 260-711 (816)
11 2rik_A Titin; I-SET IG fold, p 100.0 2.5E-33 8.4E-38 252.9 32.2 258 1-276 17-283 (284)
12 3laf_A Deleted in colorectal c 100.0 7.7E-33 2.6E-37 263.0 34.3 341 1-371 33-392 (403)
13 2ocw_A Polymeric-immunoglobuli 100.0 1.2E-30 4E-35 260.2 46.8 464 1-487 12-548 (585)
14 1cs6_A Axonin-1; neural cell a 100.0 1.9E-32 6.6E-37 258.2 31.2 336 2-371 20-373 (382)
15 2v5m_A Dscam; neurobiology SPL 100.0 5.5E-33 1.9E-37 262.5 27.4 338 1-371 16-380 (388)
16 2nzi_A Titin; IG-domain, FNIII 100.0 2.3E-32 7.8E-37 249.3 29.9 281 87-387 4-297 (305)
17 3dmk_A DOWN syndrome cell adhe 100.0 2.5E-32 8.6E-37 282.8 33.6 438 1-485 355-810 (816)
18 3p3y_A Neurofascin; IG domains 100.0 4.2E-33 1.4E-37 265.0 25.2 341 1-371 29-394 (404)
19 2yd9_A Receptor-type tyrosine- 100.0 1.1E-32 3.9E-37 251.0 25.1 259 1-281 18-295 (304)
20 3qs7_E FL cytokine receptor; i 100.0 1E-32 3.4E-37 261.3 23.1 336 1-372 60-406 (423)
21 2wim_A N-CAM 2, NCAM2, neural 100.0 1.1E-31 3.9E-36 243.0 27.1 260 1-279 16-286 (291)
22 1qz1_A Neural cell adhesion mo 100.0 1.4E-31 4.8E-36 242.3 26.8 264 1-277 14-290 (291)
23 2ec8_A MAST/stem cell growth f 100.0 9.7E-32 3.3E-36 264.1 27.5 268 1-279 126-413 (524)
24 1bih_A Hemolin; insect immunit 100.0 1.2E-31 4.1E-36 254.1 26.0 341 1-371 18-387 (395)
25 2ec8_A MAST/stem cell growth f 100.0 2.5E-31 8.6E-36 261.2 28.5 334 1-371 48-402 (524)
26 3laf_A Deleted in colorectal c 100.0 1.4E-31 4.7E-36 254.4 25.4 263 2-279 134-403 (403)
27 3oq3_B IFN-alpha/beta binding 100.0 5.3E-32 1.8E-36 249.2 20.8 261 1-275 41-328 (329)
28 1itb_B Type 1 interleukin-1 re 100.0 2.4E-32 8.2E-37 250.4 18.1 270 1-276 17-313 (315)
29 1ry7_B FGFR-3, fibroblast grow 100.0 1.5E-32 5E-37 254.0 16.2 270 1-281 20-331 (334)
30 2y25_A Myomesin; structural pr 100.0 4.9E-32 1.7E-36 248.7 17.9 259 1-277 18-315 (317)
31 1i1r_A GP130, interleukin-6 re 100.0 4E-31 1.4E-35 240.2 23.5 275 187-485 11-300 (303)
32 3qs9_E FL cytokine receptor; i 100.0 1.1E-30 3.7E-35 254.0 26.9 253 3-280 153-417 (527)
33 3qs9_E FL cytokine receptor; i 100.0 1.5E-30 5.3E-35 252.9 27.4 336 1-371 60-405 (527)
34 3kld_A Contactin 4, axcam, BIG 100.0 7.2E-31 2.5E-35 247.0 24.0 256 2-276 115-382 (384)
35 1wio_A CD4, T-cell surface gly 100.0 7.2E-31 2.5E-35 245.3 23.3 310 1-367 6-351 (363)
36 2rcj_C Light chain; immunoglob 100.0 2.4E-29 8.1E-34 247.1 32.8 294 1-301 12-343 (523)
37 2o26_X MAST/stem cell growth f 100.0 1.1E-30 3.9E-35 236.1 21.2 256 1-279 24-290 (290)
38 3p3y_A Neurofascin; IG domains 100.0 6.3E-30 2.2E-34 243.0 26.5 263 1-277 128-403 (404)
39 4dep_C Interleukin-1 receptor 100.0 1.5E-30 5.1E-35 242.0 20.7 274 1-277 19-333 (349)
40 2y23_A Myomesin; structural pr 100.0 4.8E-30 1.6E-34 234.8 22.9 256 1-276 13-311 (312)
41 2ocw_A Polymeric-immunoglobuli 100.0 9.9E-29 3.4E-33 246.3 33.5 356 1-372 124-537 (585)
42 2d9q_B Granulocyte colony-stim 100.0 2.2E-29 7.7E-34 229.6 26.1 276 188-486 8-307 (313)
43 1bih_A Hemolin; insect immunit 100.0 1.6E-29 5.5E-34 239.4 24.1 264 1-275 112-394 (395)
44 3ejj_X Macrophage colony-stimu 100.0 5.5E-30 1.9E-34 231.7 19.9 261 1-279 16-283 (289)
45 3qs7_E FL cytokine receptor; i 100.0 1.5E-29 5.2E-34 239.5 23.3 257 3-284 153-421 (423)
46 4fqp_A Poliovirus receptor; im 100.0 1.3E-29 4.5E-34 231.7 22.1 264 2-279 13-306 (313)
47 2rcj_C Light chain; immunoglob 100.0 1.3E-28 4.3E-33 241.9 29.4 268 2-274 127-417 (523)
48 1cs6_A Axonin-1; neural cell a 100.0 2.1E-29 7.2E-34 237.4 22.8 256 1-276 113-381 (382)
49 3rjd_A High affinity immunoglo 100.0 7.5E-29 2.6E-33 220.7 24.4 230 1-267 13-249 (262)
50 4fom_A Poliovirus receptor-rel 100.0 1.3E-30 4.4E-35 238.0 10.8 268 2-280 12-303 (308)
51 2v5m_A Dscam; neurobiology SPL 100.0 9.5E-29 3.2E-33 233.5 23.6 254 1-275 115-387 (388)
52 1z7z_I Intercellular adhesion 100.0 4.4E-29 1.5E-33 240.5 21.7 317 1-371 98-440 (450)
53 3o4o_C Interleukin-1 receptor 100.0 2.1E-30 7.3E-35 239.9 11.8 269 1-275 30-333 (339)
54 3u83_A Poliovirus receptor-rel 100.0 3.6E-29 1.2E-33 231.0 19.6 267 1-281 26-324 (331)
55 1n26_A IL-6 receptor alpha cha 100.0 3.1E-28 1.1E-32 222.9 24.9 267 189-481 15-289 (325)
56 1z7z_I Intercellular adhesion 100.0 8E-29 2.7E-33 238.7 21.5 317 1-368 11-351 (450)
57 3v2a_R Vascular endothelial gr 100.0 7.8E-31 2.7E-35 270.5 7.6 458 1-486 236-758 (772)
58 2oz4_A Intercellular adhesion 100.0 1.7E-28 5.9E-33 218.5 21.8 237 1-277 15-264 (265)
59 1cfb_A Drosophila neuroglian; 100.0 7.1E-28 2.4E-32 205.5 24.1 198 275-485 2-202 (205)
60 4dkd_C Macrophage colony-stimu 100.0 1.5E-29 5.1E-34 229.1 14.0 260 1-281 16-285 (292)
61 1wio_A CD4, T-cell surface gly 100.0 1.3E-28 4.5E-33 230.0 18.1 226 1-275 108-361 (363)
62 1qgc_4 Protein (immunoglobulin 100.0 3.1E-28 1E-32 233.9 19.7 297 1-301 13-367 (438)
63 2wng_A Tyrosine-protein phosph 100.0 2E-28 6.8E-33 225.3 16.8 260 1-267 15-309 (327)
64 3l5h_A Interleukin-6 receptor 100.0 1.3E-28 4.5E-33 245.4 12.8 352 97-482 11-394 (589)
65 3mjg_X Beta-type platelet-deri 100.0 9.9E-28 3.4E-32 216.7 16.9 257 1-282 12-283 (289)
66 2nzi_A Titin; IG-domain, FNIII 100.0 4.8E-27 1.6E-31 214.0 19.9 254 1-268 16-281 (305)
67 3vh8_G Killer cell immunoglobu 99.9 7.1E-28 2.4E-32 220.4 13.5 258 1-279 35-315 (316)
68 3v2a_R Vascular endothelial gr 99.9 1.5E-27 5E-32 246.0 14.2 282 2-301 139-447 (772)
69 2q7n_A Leukemia inhibitory fac 99.9 1.4E-25 4.8E-30 212.4 20.7 272 185-487 208-487 (488)
70 1qgc_4 Protein (immunoglobulin 99.9 6.8E-27 2.3E-31 224.5 12.0 263 3-273 130-435 (438)
71 2ibg_A CG9211-PA, GH03927P; IH 99.9 5.4E-25 1.8E-29 189.1 22.1 205 279-487 2-213 (214)
72 3p4l_A Neogenin; iron homeosta 99.9 3E-25 1E-29 190.0 20.3 196 277-489 3-207 (211)
73 2vkw_A Neural cell adhesion mo 99.9 2.6E-25 8.8E-30 190.2 19.5 201 273-487 3-204 (209)
74 2rik_A Titin; I-SET IG fold, p 99.9 7.3E-24 2.5E-28 190.8 29.1 264 87-371 5-275 (284)
75 1iga_A IGA1; immunoglobulin; N 99.9 2.6E-24 9E-29 208.2 27.5 268 1-274 13-342 (475)
76 1igt_B IGG2A intact antibody - 99.9 5.5E-26 1.9E-30 218.3 15.4 263 1-267 12-331 (444)
77 3l5h_A Interleukin-6 receptor 99.9 1E-25 3.5E-30 224.6 17.6 428 1-484 15-491 (589)
78 1hzh_H IGG, immunoglobulin hea 99.9 3.1E-25 1E-29 213.8 15.0 259 1-267 12-340 (457)
79 1za6_B IGG heavy chain; immuno 99.9 9.7E-26 3.3E-30 208.6 10.7 258 1-266 12-330 (344)
80 3lcy_A Titin; A-BAND, IG tande 99.9 4E-24 1.4E-28 181.2 19.5 170 1-178 19-196 (197)
81 2wqr_A IG epsilon chain C regi 99.9 1E-25 3.4E-30 206.7 9.7 258 5-266 25-309 (323)
82 2yd1_A Tyrosine-protein phosph 99.9 7.1E-24 2.4E-28 181.8 19.9 171 1-180 18-202 (212)
83 2iep_A Muscle-specific kinase 99.9 2.4E-24 8.3E-29 181.8 16.6 170 1-180 19-192 (192)
84 3lpw_A A77-A78 domain from tit 99.9 8.2E-24 2.8E-28 179.3 19.7 191 276-484 3-194 (197)
85 3l5i_A Interleukin-6 receptor 99.9 9.8E-24 3.4E-28 190.4 20.5 217 246-486 66-290 (290)
86 2a38_A Titin; Z1Z2, structural 99.9 4.2E-24 1.4E-28 180.6 16.6 170 1-176 17-193 (194)
87 1igt_B IGG2A intact antibody - 99.9 1.2E-25 4.2E-30 215.8 7.6 260 2-265 136-433 (444)
88 1igy_B IGG1 intact antibody MA 99.9 7.7E-27 2.6E-31 223.4 -1.4 261 1-267 11-321 (434)
89 2wv3_A Neuroplastin; igcam, me 99.9 3.1E-23 1.1E-27 174.5 20.6 163 2-177 15-189 (190)
90 2yd6_A PTPRD protein; hydrolas 99.9 1.7E-23 5.8E-28 179.4 19.0 170 1-180 18-206 (212)
91 1iga_A IGA1; immunoglobulin; N 99.9 3.3E-23 1.1E-27 200.5 22.3 260 2-266 139-443 (475)
92 2j8h_A Titin, connectin; cardi 99.9 1.7E-23 6E-28 177.3 17.7 169 1-177 16-196 (197)
93 2v9r_A Roundabout homolog 1; p 99.9 3.2E-23 1.1E-27 177.9 19.1 180 1-184 21-208 (212)
94 2vr9_A Roundabout 1, ROBO; imm 99.9 3.1E-23 1.1E-27 178.6 18.1 172 1-178 21-206 (217)
95 3fl7_A Ephrin receptor; ATP-bi 99.9 4E-24 1.4E-28 203.7 13.3 225 250-487 304-534 (536)
96 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.6E-23 5.6E-28 176.2 15.6 170 1-177 14-187 (189)
97 2v44_A NCAM2, neural cell adhe 99.9 6.7E-23 2.3E-27 172.4 19.1 164 1-176 14-185 (189)
98 3rbs_A Myomesin-1; immunoglobu 99.9 9.1E-24 3.1E-28 179.3 12.9 165 1-176 14-205 (207)
99 3f7q_A Integrin beta-4, GP150; 99.9 2.3E-23 7.8E-28 181.2 15.0 190 277-486 4-199 (234)
100 1fnf_A Fibronectin; RGD, extra 99.9 9E-21 3.1E-25 177.3 33.7 296 143-478 59-359 (368)
101 3t1w_A Four-domain fibronectin 99.9 7.5E-21 2.6E-25 178.3 33.0 299 142-479 59-362 (375)
102 2c5d_C AXL oncogene, tyrosine- 99.9 6.4E-23 2.2E-27 173.4 16.9 163 1-176 14-191 (195)
103 2va4_A NCAM2, N-CAM 2, neural 99.9 2.3E-22 7.8E-27 169.6 19.2 164 1-176 16-191 (192)
104 1bqu_A Protein (GP130); cytoki 99.9 8.8E-23 3E-27 175.3 16.9 196 275-486 4-205 (215)
105 1zvo_C Myeloma immunoglobulin 99.9 5E-21 1.7E-25 186.3 31.2 264 1-268 12-388 (512)
106 2r15_A Myomesin-1; sarcomeric 99.9 1.5E-22 5.1E-27 173.7 17.7 166 3-177 16-209 (212)
107 1hzh_H IGG, immunoglobulin hea 99.9 3.4E-24 1.2E-28 206.5 8.2 258 1-266 144-443 (457)
108 1epf_A NCAM, protein (neural c 99.9 1.4E-22 4.8E-27 170.7 16.8 166 1-176 14-189 (191)
109 2yd9_A Receptor-type tyrosine- 99.9 1.2E-21 4E-26 178.2 23.6 261 86-371 5-282 (304)
110 2yd1_A Tyrosine-protein phosph 99.9 1.1E-21 3.7E-26 168.2 21.7 186 87-282 6-205 (212)
111 1igy_B IGG1 intact antibody MA 99.9 3.2E-25 1.1E-29 212.2 -0.9 261 2-266 132-424 (434)
112 1zlg_A Anosmin 1; insulin-like 99.9 7.1E-22 2.4E-26 198.4 23.0 217 250-485 132-374 (680)
113 1n26_A IL-6 receptor alpha cha 99.9 1E-20 3.4E-25 173.1 28.7 260 97-380 14-292 (325)
114 4fa8_A Secreted protein BARF1; 99.9 1.2E-23 3.9E-28 177.5 8.1 165 2-170 6-194 (203)
115 1rhf_A Tyrosine-protein kinase 99.9 3.5E-22 1.2E-26 166.9 17.0 159 1-176 14-181 (182)
116 2wim_A N-CAM 2, NCAM2, neural 99.9 3.7E-21 1.3E-25 173.7 25.0 263 87-373 4-277 (291)
117 3n06_B PRL-R, prolactin recept 99.9 1.2E-21 4E-26 167.3 20.0 195 277-485 2-203 (210)
118 1i1r_A GP130, interleukin-6 re 99.9 4.9E-21 1.7E-25 173.6 25.3 259 98-377 13-293 (303)
119 1f97_A Junction adhesion molec 99.9 2.9E-22 1E-26 171.9 16.3 173 1-177 13-206 (212)
120 1tdq_A Tenascin-R; extracellul 99.9 1.2E-20 4.2E-25 169.5 27.3 253 194-480 27-280 (283)
121 1qz1_A Neural cell adhesion mo 99.9 2.3E-21 8E-26 175.0 22.6 254 97-371 10-281 (291)
122 2d9q_B Granulocyte colony-stim 99.9 2.5E-21 8.6E-26 176.3 22.8 273 98-387 9-311 (313)
123 3ojm_B Fibroblast growth facto 99.9 4.7E-22 1.6E-26 173.1 17.0 179 1-182 31-225 (231)
124 3grw_A Fibroblast growth facto 99.9 2.5E-22 8.6E-27 176.0 15.2 179 1-182 27-222 (241)
125 2va4_A NCAM2, N-CAM 2, neural 99.9 4.3E-21 1.5E-25 161.7 22.1 186 87-276 2-192 (192)
126 3r8q_A Fibronectin; heparin, F 99.9 7.2E-21 2.5E-25 171.5 24.9 251 194-477 33-284 (290)
127 3r4d_A CEA-related cell adhesi 99.9 8.7E-22 3E-26 168.3 16.9 177 1-181 11-203 (208)
128 3rjd_A High affinity immunoglo 99.9 1.6E-20 5.5E-25 166.7 24.9 236 97-370 9-249 (262)
129 3k0w_A Mucosa-associated lymph 99.9 1.2E-21 4E-26 168.6 16.8 157 1-178 30-202 (218)
130 2iep_A Muscle-specific kinase 99.9 2.9E-21 9.9E-26 162.8 18.9 182 87-279 7-192 (192)
131 2gee_A Hypothetical protein; f 99.9 3.1E-21 1.1E-25 163.6 18.6 179 276-480 21-200 (203)
132 3sgj_C Human FCG3A receptor; r 99.9 8.9E-22 3.1E-26 166.9 15.1 156 1-181 19-177 (204)
133 3lcy_A Titin; A-BAND, IG tande 99.9 4.4E-21 1.5E-25 162.4 19.2 182 87-277 7-196 (197)
134 1zvo_C Myeloma immunoglobulin 99.9 1.8E-20 6.2E-25 182.3 25.4 252 4-266 150-492 (512)
135 1cd9_B G-CSF-R, protein (G-CSF 99.9 9.3E-21 3.2E-25 162.5 20.5 194 277-486 3-213 (215)
136 1qr4_A Protein (tenascin); fib 99.9 1.2E-20 4.1E-25 157.8 20.5 181 276-486 4-184 (186)
137 2yd6_A PTPRD protein; hydrolas 99.9 3.4E-21 1.2E-25 165.0 17.5 189 87-279 6-206 (212)
138 2a38_A Titin; Z1Z2, structural 99.9 5.2E-21 1.8E-25 161.5 18.1 181 87-276 5-194 (194)
139 3rbs_A Myomesin-1; immunoglobu 99.9 8.1E-21 2.8E-25 161.1 19.1 168 97-275 10-205 (207)
140 1zlg_A Anosmin 1; insulin-like 99.9 6.2E-19 2.1E-23 177.1 36.0 332 142-485 223-630 (680)
141 1nbq_A JAM, junctional adhesio 99.9 3.9E-22 1.3E-26 170.7 10.9 172 1-176 16-207 (209)
142 1itb_B Type 1 interleukin-1 re 99.9 1.9E-21 6.6E-26 177.7 16.2 168 2-177 116-313 (315)
143 1fnl_A Low affinity immunoglob 99.9 4.1E-21 1.4E-25 158.9 16.6 152 1-177 19-173 (175)
144 3oq3_B IFN-alpha/beta binding 99.9 3.2E-21 1.1E-25 177.1 17.5 167 1-176 140-328 (329)
145 2wv3_A Neuroplastin; igcam, me 99.9 1.3E-20 4.5E-25 158.4 19.8 170 99-276 12-189 (190)
146 2x1w_L Vascular endothelial gr 99.9 1.2E-21 4.2E-26 167.8 13.6 171 1-181 19-210 (213)
147 2j8h_A Titin, connectin; cardi 99.9 6.1E-21 2.1E-25 161.5 17.7 181 87-276 4-196 (197)
148 1vca_A VCAM-D1,2, human vascul 99.9 3.8E-22 1.3E-26 168.9 10.1 167 2-181 14-200 (202)
149 2ha1_A Fibronectin; beta sandw 99.9 5.2E-21 1.8E-25 162.2 17.0 182 281-482 2-199 (201)
150 2v9r_A Roundabout homolog 1; p 99.9 4.3E-21 1.5E-25 164.6 16.7 190 82-281 4-206 (212)
151 3s97_C Contactin-1; carbonic a 99.9 1.1E-21 3.8E-26 166.7 12.8 168 1-177 20-200 (201)
152 3b5h_A Cervical EMMPRIN, HAB18 99.9 4.1E-21 1.4E-25 160.6 15.9 160 1-177 10-182 (184)
153 3jz7_A MCAR, CAR, coxsackievir 99.9 7.7E-22 2.6E-26 169.5 11.7 171 1-178 12-212 (214)
154 2fbo_J V1V2;, variable region- 99.9 1.2E-21 4E-26 172.8 13.1 166 1-168 14-239 (250)
155 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.5E-20 5E-25 158.0 18.8 173 97-276 10-187 (189)
156 2x1w_L Vascular endothelial gr 99.9 7.6E-21 2.6E-25 162.8 17.2 182 97-279 15-209 (213)
157 2ny1_B T-cell surface glycopro 99.9 1.6E-21 5.5E-26 163.0 12.3 162 1-181 7-182 (184)
158 1ugn_A LIR1, leukocyte immunog 99.9 1.5E-21 5E-26 165.3 11.9 156 1-166 16-181 (198)
159 3grw_A Fibroblast growth facto 99.9 1.5E-20 5.2E-25 164.6 18.9 196 86-283 10-224 (241)
160 2y25_A Myomesin; structural pr 99.9 3.5E-21 1.2E-25 176.2 15.1 168 2-178 111-315 (317)
161 1ry7_B FGFR-3, fibroblast grow 99.9 2.1E-21 7.2E-26 179.1 13.5 176 2-181 136-330 (334)
162 2wng_A Tyrosine-protein phosph 99.9 3.9E-20 1.3E-24 169.9 21.7 171 96-266 10-205 (327)
163 1jbj_A CD3 epsilon and gamma e 99.9 2E-21 6.7E-26 162.3 11.7 144 3-168 13-179 (186)
164 3ojm_B Fibroblast growth facto 99.9 2E-20 6.7E-25 162.8 18.4 186 97-284 27-228 (231)
165 2y23_A Myomesin; structural pr 99.9 3.6E-20 1.2E-24 169.0 20.9 255 97-371 9-303 (312)
166 3t1w_A Four-domain fibronectin 99.9 3.6E-19 1.2E-23 166.8 28.0 226 239-492 57-284 (375)
167 2c5d_C AXL oncogene, tyrosine- 99.9 3.9E-20 1.3E-24 156.2 19.1 175 87-275 2-191 (195)
168 3sgj_C Human FCG3A receptor; r 99.9 1.2E-20 4.2E-25 159.9 15.9 162 99-283 17-180 (204)
169 1f2q_A High affinity immunoglo 99.9 4E-21 1.4E-25 159.2 12.4 156 1-181 16-174 (176)
170 1rhf_A Tyrosine-protein kinase 99.9 6.4E-20 2.2E-24 153.0 19.8 172 88-275 3-181 (182)
171 3p2t_A Leukocyte immunoglobuli 99.9 1.1E-21 3.7E-26 165.8 8.9 156 1-166 16-179 (196)
172 2c1o_A IGK-C protein; FAB frag 99.9 5.3E-21 1.8E-25 168.9 13.6 203 55-266 11-244 (254)
173 1vca_A VCAM-D1,2, human vascul 99.9 2E-20 6.9E-25 158.2 16.5 179 99-280 11-200 (202)
174 1hng_A CD2; T lymphocyte adhes 99.9 2E-21 6.9E-26 160.5 10.0 157 2-175 9-173 (176)
175 1uct_A Immunoglobulin alpha FC 99.8 3.5E-21 1.2E-25 164.9 11.1 166 1-178 20-198 (218)
176 2d3v_A Leukocyte immunoglobuli 99.8 1E-21 3.5E-26 165.9 7.7 156 1-166 16-180 (196)
177 2r15_A Myomesin-1; sarcomeric 99.8 1.8E-19 6.2E-24 154.3 21.8 171 100-277 13-210 (212)
178 4dep_C Interleukin-1 receptor 99.8 4E-20 1.4E-24 171.6 18.7 264 97-373 15-326 (349)
179 3mtr_A N-CAM-1, NCAM-1, neural 99.8 1.7E-19 5.9E-24 154.7 21.3 184 186-382 24-210 (215)
180 2vr9_A Roundabout 1, ROBO; imm 99.8 3.7E-20 1.3E-24 159.3 17.1 189 85-277 7-206 (217)
181 3bp6_B Programmed cell death 1 99.8 5.3E-21 1.8E-25 162.5 11.5 165 1-178 14-193 (202)
182 1fnf_A Fibronectin; RGD, extra 99.8 6E-19 2.1E-23 164.9 26.6 218 239-485 56-275 (368)
183 3o4o_C Interleukin-1 receptor 99.8 9.5E-21 3.3E-25 175.0 14.2 275 88-373 19-328 (339)
184 2o26_X MAST/stem cell growth f 99.8 1.6E-19 5.6E-24 162.8 21.7 257 87-371 12-279 (290)
185 2v44_A NCAM2, neural cell adhe 99.8 9.5E-20 3.3E-24 153.0 18.8 169 97-273 10-183 (189)
186 2gi7_A GPVI protein; IG-like d 99.8 5.1E-21 1.7E-25 159.7 10.6 146 1-166 19-168 (184)
187 3mj6_A Junctional adhesion mol 99.8 2E-20 6.8E-25 166.7 15.2 188 1-197 17-256 (268)
188 2ifg_A High affinity nerve gro 99.8 1E-21 3.5E-26 181.7 6.3 167 1-180 170-347 (347)
189 3k0w_A Mucosa-associated lymph 99.8 2E-19 6.7E-24 154.6 20.0 162 97-278 26-203 (218)
190 1tdq_A Tenascin-R; extracellul 99.8 5.9E-19 2E-23 158.5 23.6 188 274-487 10-198 (283)
191 4fqp_A Poliovirus receptor; im 99.8 1.5E-20 5.2E-25 171.5 13.4 174 1-181 129-307 (313)
192 3ry4_A Low affinity immunoglob 99.8 4.1E-20 1.4E-24 152.3 14.1 151 1-176 16-169 (170)
193 1epf_A NCAM, protein (neural c 99.8 2.7E-19 9.2E-24 150.5 19.4 172 97-275 10-189 (191)
194 3s97_C Contactin-1; carbonic a 99.8 2.7E-19 9.4E-24 151.8 19.1 170 97-276 16-200 (201)
195 1sy6_A T-cell surface glycopro 99.8 3.8E-20 1.3E-24 156.7 13.5 146 1-168 15-193 (204)
196 3ejj_X Macrophage colony-stimu 99.8 1.8E-19 6.2E-24 162.5 18.8 250 96-372 11-273 (289)
197 3r8q_A Fibronectin; heparin, F 99.8 7.7E-19 2.6E-23 158.2 22.7 184 278-488 20-204 (290)
198 4fa8_A Secreted protein BARF1; 99.8 4.2E-20 1.4E-24 155.6 12.9 167 99-270 3-195 (203)
199 3jz7_A MCAR, CAR, coxsackievir 99.8 1.9E-19 6.5E-24 154.5 16.9 172 97-278 8-213 (214)
200 1fnl_A Low affinity immunoglob 99.8 2.9E-19 9.8E-24 147.8 16.6 157 98-277 16-174 (175)
201 1oll_A NK receptor; immune sys 99.8 4E-20 1.4E-24 154.8 11.2 154 1-165 15-172 (188)
202 3vh8_G Killer cell immunoglobu 99.8 5.6E-19 1.9E-23 161.3 19.8 262 87-375 24-303 (316)
203 1f2q_A High affinity immunoglo 99.8 2.3E-19 7.8E-24 148.6 15.6 169 87-280 4-174 (176)
204 4f80_A Butyrophilin subfamily 99.8 2.1E-19 7.2E-24 155.5 16.0 170 2-178 17-213 (226)
205 2dtg_E Insulin receptor; IR ec 99.8 2.8E-21 9.7E-26 199.4 4.6 244 240-488 548-890 (897)
206 1mq8_A ICAM-1, intercellular a 99.8 2.4E-20 8.1E-25 164.7 9.7 257 1-281 11-286 (291)
207 4i0k_A CD276 antigen; immunogl 99.8 2.6E-20 8.8E-25 160.9 9.4 178 1-183 7-211 (222)
208 1f97_A Junction adhesion molec 99.8 2.9E-19 9.9E-24 153.1 15.9 177 97-277 9-207 (212)
209 3e0g_A Leukemia inhibitory fac 99.8 3.3E-19 1.1E-23 167.5 17.2 270 185-486 203-481 (483)
210 1b6u_A KIR2DL3, P58 killer cel 99.8 3.6E-20 1.2E-24 162.1 10.0 195 1-205 18-228 (257)
211 3sbw_C Programmed cell death 1 99.8 2.5E-19 8.6E-24 154.7 15.0 175 2-181 14-214 (222)
212 4frw_A Poliovirus receptor-rel 99.8 8.2E-20 2.8E-24 157.2 11.4 173 1-176 11-209 (218)
213 3u83_A Poliovirus receptor-rel 99.8 4.9E-20 1.7E-24 169.7 10.5 173 2-181 145-323 (331)
214 4go6_B HCF C-terminal chain 1; 99.8 1.1E-19 3.6E-24 157.0 11.8 167 305-486 18-201 (232)
215 1hng_A CD2; T lymphocyte adhes 99.8 4.2E-19 1.4E-23 146.5 14.8 156 98-275 5-174 (176)
216 3s98_A Interferon alpha/beta r 99.8 7.5E-19 2.6E-23 158.4 17.6 186 279-484 4-197 (306)
217 3bp6_B Programmed cell death 1 99.8 3.9E-19 1.3E-23 151.0 14.8 170 97-278 10-194 (202)
218 3r4d_A CEA-related cell adhesi 99.8 8.2E-19 2.8E-23 149.7 16.4 174 99-282 9-205 (208)
219 2ny1_B T-cell surface glycopro 99.8 7E-19 2.4E-23 146.9 15.4 161 97-281 3-183 (184)
220 2oz4_A Intercellular adhesion 99.8 8.8E-19 3E-23 155.6 16.8 227 100-371 14-255 (265)
221 3ry4_A Low affinity immunoglob 99.8 1.5E-18 5.2E-23 142.8 16.6 156 97-275 12-169 (170)
222 2pet_A Lutheran blood group gl 99.8 6.1E-20 2.1E-24 159.6 8.2 163 1-164 12-211 (231)
223 1nkr_A P58-CL42 KIR; inhibitor 99.8 1.9E-19 6.4E-24 152.6 11.0 152 1-164 19-183 (201)
224 2ghw_B Anti-SARS SCFV antibody 99.8 1.9E-18 6.3E-23 151.8 17.5 174 1-177 14-241 (247)
225 2zg1_A Sialic acid-binding IG- 99.8 1.4E-18 4.9E-23 148.9 16.4 162 1-171 12-206 (214)
226 3mj8_L Stimulatory hamster ant 99.8 6.3E-20 2.1E-24 157.3 7.7 168 1-171 12-206 (213)
227 4fom_A Poliovirus receptor-rel 99.8 4.6E-20 1.6E-24 167.9 7.1 172 2-181 127-303 (308)
228 2if7_A SLAM family member 6; N 99.8 5E-19 1.7E-23 148.6 12.8 157 2-171 11-185 (193)
229 2ed9_A Netrin receptor DCC; tu 99.8 2.2E-19 7.7E-24 138.9 9.8 121 360-486 3-123 (124)
230 4dkd_C Macrophage colony-stimu 99.8 6.7E-19 2.3E-23 159.0 14.4 258 87-371 4-272 (292)
231 2ifg_A High affinity nerve gro 99.8 6.2E-21 2.1E-25 176.5 0.8 206 60-279 136-347 (347)
232 3d9a_L Light chain of hyhel10 99.8 1.4E-19 4.8E-24 155.1 9.1 165 1-168 13-203 (213)
233 1dr9_A B7-1 (CD80), T lymphocy 99.8 5.9E-19 2E-23 149.7 12.8 169 1-174 6-197 (201)
234 3bpo_C Interleukin-13 receptor 99.8 1.4E-17 4.7E-22 151.5 22.6 232 242-486 54-312 (314)
235 1hnf_A CD2; T lymphocyte adhes 99.8 1.9E-18 6.4E-23 142.5 15.1 156 2-174 12-177 (182)
236 1f3r_B FV antibody fragment; I 99.8 8.8E-19 3E-23 154.6 13.4 164 1-165 12-232 (257)
237 3d85_D IL-12B, interleukin-12 99.8 5.4E-18 1.9E-22 152.0 18.6 257 192-482 18-303 (306)
238 3b5h_A Cervical EMMPRIN, HAB18 99.8 4.6E-18 1.6E-22 142.0 16.8 168 99-277 8-183 (184)
239 1lk3_L 9D7 light chain; antige 99.8 3.2E-19 1.1E-23 152.4 10.0 164 1-167 12-201 (210)
240 3p2t_A Leukocyte immunoglobuli 99.8 5.8E-19 2E-23 149.0 11.3 159 100-265 15-179 (196)
241 1p6f_A NKP46, natural cytotoxi 99.8 1.1E-18 3.7E-23 151.5 12.7 168 1-179 18-192 (242)
242 1ugn_A LIR1, leukocyte immunog 99.8 1.1E-18 3.7E-23 147.6 12.2 160 100-265 15-181 (198)
243 2if7_A SLAM family member 6; N 99.8 2.7E-17 9.3E-22 138.0 20.7 161 97-272 6-187 (193)
244 3se4_A Interferon alpha/beta r 99.8 1.9E-18 6.4E-23 163.5 15.1 227 239-486 161-409 (414)
245 3umt_A SCFV heavy chain and li 99.8 3.4E-18 1.1E-22 150.9 15.8 176 1-179 14-246 (256)
246 1nqb_A Single-chain antibody f 99.8 4E-18 1.4E-22 150.1 16.2 174 1-178 12-233 (256)
247 3mjg_X Beta-type platelet-deri 99.8 7.8E-18 2.7E-22 151.7 18.2 246 96-371 7-269 (289)
248 2q7n_A Leukemia inhibitory fac 99.8 2.7E-17 9.2E-22 155.8 21.9 254 97-376 211-477 (488)
249 2fbo_J V1V2;, variable region- 99.8 4E-18 1.4E-22 150.1 15.1 176 97-274 10-249 (250)
250 3l5i_A Interleukin-6 receptor 99.8 7.1E-18 2.4E-22 152.0 16.7 179 277-484 2-192 (290)
251 3nl4_L Antigen binding fragmen 99.8 1.1E-18 3.7E-23 149.6 10.6 159 1-162 13-198 (213)
252 1uct_A Immunoglobulin alpha FC 99.8 3.5E-18 1.2E-22 146.2 13.7 178 87-278 9-199 (218)
253 2p1y_A Bispecific alpha/beta T 99.8 2.7E-18 9.4E-23 149.8 13.3 161 1-165 12-222 (238)
254 2d3v_A Leukocyte immunoglobuli 99.8 1.2E-18 4.2E-23 146.9 10.1 157 100-265 15-180 (196)
255 3mj8_L Stimulatory hamster ant 99.8 6E-18 2.1E-22 144.9 14.2 173 98-271 9-207 (213)
256 1nbq_A JAM, junctional adhesio 99.8 7E-19 2.4E-23 150.3 8.2 168 97-268 12-198 (209)
257 3esu_F Antibody 14B7* light ch 99.8 9.5E-18 3.3E-22 147.5 15.6 160 1-163 16-231 (250)
258 3uzq_A Anti-dengue MAB 4E11; d 99.8 4E-18 1.4E-22 150.1 12.9 178 1-181 13-247 (253)
259 3auv_A SC-DSFV derived from th 99.8 8.8E-18 3E-22 149.9 15.2 163 1-165 24-236 (276)
260 3juy_B 3B3 single chain varian 99.8 1.6E-17 5.4E-22 146.6 16.6 163 1-166 18-244 (256)
261 3s96_B 3B5H10 FAB light chain; 99.8 5.1E-19 1.8E-23 152.2 6.5 167 1-170 12-212 (218)
262 2gi7_A GPVI protein; IG-like d 99.8 2E-18 6.7E-23 143.9 9.8 147 100-265 18-168 (184)
263 3gkz_A Anti-methamphetamine si 99.8 1.9E-17 6.5E-22 146.2 16.6 175 1-178 20-249 (257)
264 3pv7_A B7-H6, IG-like domain-c 99.8 1.9E-18 6.5E-23 151.8 10.0 171 1-176 15-224 (248)
265 1jbj_A CD3 epsilon and gamma e 99.8 7.8E-18 2.7E-22 140.4 13.0 145 100-267 10-179 (186)
266 2dbj_A Proto-oncogene tyrosine 99.8 7.1E-18 2.4E-22 130.0 11.8 114 368-487 1-118 (124)
267 3d9a_L Light chain of hyhel10 99.8 8.4E-18 2.9E-22 144.0 13.4 169 97-267 9-203 (213)
268 1ccz_A Protein (CD58); LFA-3, 99.8 4.5E-18 1.5E-22 139.3 11.1 153 2-174 8-167 (171)
269 2dru_A Chimera of CD48 antigen 99.8 6.6E-18 2.3E-22 139.6 12.1 153 1-172 11-175 (180)
270 1qok_A MFE-23 recombinant anti 99.8 2E-17 6.7E-22 148.0 16.1 175 1-177 38-267 (282)
271 1lk3_L 9D7 light chain; antige 99.7 1.7E-17 5.8E-22 141.7 14.8 169 97-266 8-201 (210)
272 1q0x_L FAB 9B1, light chain; a 99.7 2E-18 6.9E-23 147.7 9.0 164 1-167 12-204 (212)
273 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 1.1E-18 3.6E-23 150.6 7.1 168 1-172 12-217 (222)
274 3d85_D IL-12B, interleukin-12 99.7 2.9E-16 1E-20 140.7 23.1 250 101-376 18-301 (306)
275 3sbw_C Programmed cell death 1 99.7 4E-17 1.4E-21 140.8 16.8 175 97-279 9-213 (222)
276 3lqm_A Interleukin-10 receptor 99.7 2.3E-17 7.8E-22 138.7 14.6 182 281-487 4-196 (201)
277 3n1f_C Cell adhesion molecule- 99.7 1E-17 3.6E-22 123.5 10.9 96 385-484 3-101 (102)
278 3sob_L Antibody light chain; b 99.7 4.1E-18 1.4E-22 148.6 10.1 165 1-168 36-226 (237)
279 4frw_A Poliovirus receptor-rel 99.7 1.4E-17 4.7E-22 143.2 13.3 175 97-275 7-209 (218)
280 3s98_A Interferon alpha/beta r 99.7 3.2E-17 1.1E-21 147.7 16.1 211 249-485 69-301 (306)
281 4f80_A Butyrophilin subfamily 99.7 1.2E-16 4E-21 138.1 19.1 172 97-277 12-213 (226)
282 1wj3_A KIAA1496 protein; beta 99.7 1.2E-17 4.1E-22 126.6 11.1 110 368-486 1-110 (117)
283 1gsm_A Madcam-1, mucosal addre 99.7 8.9E-17 3E-21 133.7 17.3 163 97-266 15-194 (210)
284 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 4E-17 1.4E-21 143.9 16.0 173 1-177 15-247 (256)
285 2c1o_A IGK-C protein; FAB frag 99.7 3.5E-18 1.2E-22 150.7 9.1 165 1-168 50-245 (254)
286 4fmk_A Poliovirus receptor-rel 99.7 3.4E-18 1.2E-22 147.8 8.9 170 2-175 14-214 (225)
287 1oll_A NK receptor; immune sys 99.7 8.4E-18 2.9E-22 140.6 11.0 152 100-264 14-172 (188)
288 3r06_A Anti-mouse CD3epsilon a 99.7 6.5E-18 2.2E-22 144.7 10.4 164 1-167 13-202 (213)
289 2xzc_L FAB A.17 light chain; i 99.7 5.4E-18 1.9E-22 145.5 9.8 165 1-168 12-205 (216)
290 1c1e_H Catalytic antibody 1E9 99.7 2E-18 6.7E-23 148.6 7.1 167 1-171 12-213 (219)
291 1nfd_E H57 FAB; complex (immun 99.7 3.5E-19 1.2E-23 152.5 2.2 167 1-170 11-204 (212)
292 3tv3_L PGT128 light chain, IG 99.7 2.5E-18 8.4E-23 147.1 7.5 166 1-171 12-204 (211)
293 2dtg_E Insulin receptor; IR ec 99.7 8.1E-18 2.8E-22 173.7 12.7 145 281-430 471-636 (897)
294 1axi_B HGHBP, growth hormone r 99.7 2.1E-17 7.2E-22 142.5 13.0 193 276-485 27-234 (236)
295 3shs_A HOC head outer capsid p 99.7 3.4E-15 1.2E-19 124.6 25.0 236 1-261 14-278 (304)
296 2j6e_L IGM, FAB light chain; a 99.7 3.5E-18 1.2E-22 148.7 7.3 167 1-170 31-227 (234)
297 3bkj_L WO2 IGG2A FAB fragment 99.7 4.6E-18 1.6E-22 149.6 8.1 164 1-167 46-240 (252)
298 3se4_A Interferon alpha/beta r 99.7 2.1E-16 7.1E-21 149.4 19.9 213 247-484 71-304 (414)
299 1moe_A Anti-CEA MAB T84.66; an 99.7 2.2E-17 7.4E-22 144.3 12.2 161 1-163 13-219 (240)
300 1wfo_A Sidekick 2; FN3, cell a 99.7 1E-17 3.6E-22 130.6 9.0 120 361-487 3-124 (130)
301 3eow_R Poliovirus receptor; im 99.7 1.3E-18 4.5E-23 149.9 3.9 169 1-174 11-208 (221)
302 1q0x_L FAB 9B1, light chain; a 99.7 7.6E-17 2.6E-21 137.9 14.9 173 97-270 8-208 (212)
303 4dzb_B Vbeta2 (MAIT T cell rec 99.7 5.5E-18 1.9E-22 148.7 7.9 163 1-169 13-222 (246)
304 3mtr_A N-CAM-1, NCAM-1, neural 99.7 8.8E-17 3E-21 137.8 15.3 168 1-179 30-210 (215)
305 2pet_A Lutheran blood group gl 99.7 2.6E-17 8.9E-22 142.9 12.1 165 96-263 7-211 (231)
306 3lb6_C IL-13, interleukin-13 r 99.7 4.3E-16 1.5E-20 144.6 20.9 222 253-494 9-248 (380)
307 1hnf_A CD2; T lymphocyte adhes 99.7 3.4E-16 1.2E-20 129.0 17.9 155 97-273 7-177 (182)
308 3ux9_B SCFV antibody; five hel 99.7 5.9E-17 2E-21 143.0 14.1 163 1-165 14-236 (256)
309 3tv3_L PGT128 light chain, IG 99.7 2.9E-17 1E-21 140.4 11.6 171 98-271 9-205 (211)
310 4i0k_A CD276 antigen; immunogl 99.7 1.4E-17 4.9E-22 143.6 9.5 175 99-280 5-209 (222)
311 3qib_D 2B4 beta chain; IG doma 99.7 4.9E-17 1.7E-21 144.6 13.0 199 58-266 5-244 (270)
312 1gsm_A Madcam-1, mucosal addre 99.7 4.6E-17 1.6E-21 135.4 11.4 153 1-168 19-195 (210)
313 1svz_A Immunoglobulin;, single 99.7 7.4E-17 2.5E-21 141.5 13.2 162 1-164 13-228 (247)
314 3pv7_A B7-H6, IG-like domain-c 99.7 8E-17 2.7E-21 141.4 13.4 177 97-276 11-225 (248)
315 2znx_A SCFV; fluorotryptohpan, 99.7 8.2E-17 2.8E-21 140.6 13.4 162 1-164 13-222 (242)
316 2edx_A Protein tyrosine phosph 99.7 9E-17 3.1E-21 126.2 12.3 117 368-486 1-117 (134)
317 1p6f_A NKP46, natural cytotoxi 99.7 5.2E-17 1.8E-21 140.9 11.8 170 100-282 17-196 (242)
318 2haz_A N-CAM 1, neural cell ad 99.7 5.9E-17 2E-21 120.7 10.4 100 383-486 4-104 (105)
319 1dee_B IGM RF 2A2; FAB-IBP com 99.7 9E-17 3.1E-21 138.3 12.8 166 1-171 12-220 (223)
320 2vol_A Murine IGG FC; FC, zinc 99.7 1.2E-17 4E-22 142.1 7.0 162 1-167 15-197 (207)
321 1sy6_A T-cell surface glycopro 99.7 1.1E-16 3.6E-21 135.5 12.9 156 101-275 15-202 (204)
322 1pz5_B Heavy chain of FAB (SYA 99.7 2.5E-17 8.5E-22 141.8 9.1 168 1-172 12-215 (220)
323 3mj6_A Junctional adhesion mol 99.7 3.6E-16 1.2E-20 139.0 16.8 175 97-277 13-237 (268)
324 2gki_A Nuclease; anti-DNA anti 99.7 1.1E-16 3.8E-21 143.7 13.4 176 1-179 34-273 (291)
325 3d9a_H Heavy chain of hyhel10 99.7 9.4E-18 3.2E-22 143.3 6.0 164 1-169 12-205 (210)
326 3s96_B 3B5H10 FAB light chain; 99.7 1.1E-16 3.9E-21 137.5 12.8 172 98-270 9-213 (218)
327 1mju_H Immunoglobulin MS6-12; 99.7 5E-18 1.7E-22 146.6 4.2 173 1-177 12-216 (227)
328 1dr9_A B7-1 (CD80), T lymphocy 99.7 3.4E-16 1.2E-20 132.6 15.5 165 99-273 4-197 (201)
329 2ee2_A Contactin-1; neural cel 99.7 1.4E-16 4.8E-21 121.9 11.9 110 368-486 1-112 (119)
330 1x4y_A Biregional cell adhesio 99.7 1.1E-16 3.8E-21 121.3 11.2 100 383-486 5-107 (114)
331 2xzc_L FAB A.17 light chain; i 99.7 2.6E-16 9E-21 134.9 14.8 170 97-267 8-205 (216)
332 2fbj_H IGA-kappa J539 FAB (hea 99.7 9E-17 3.1E-21 138.0 11.8 165 1-169 12-212 (220)
333 3r06_A Anti-mouse CD3epsilon a 99.7 1.9E-16 6.5E-21 135.5 13.7 169 97-266 9-202 (213)
334 1v5j_A KIAA1355 protein, RSGI 99.7 3.3E-17 1.1E-21 120.6 7.5 95 386-486 7-101 (108)
335 3bqu_C 3H6 FAB light chain; be 99.7 3E-18 1E-22 149.0 2.1 163 1-166 35-223 (233)
336 4fmk_A Poliovirus receptor-rel 99.7 1.6E-16 5.4E-21 137.2 12.9 178 97-276 9-218 (225)
337 4dzb_B Vbeta2 (MAIT T cell rec 99.7 2E-16 6.7E-21 138.7 13.7 172 97-268 9-222 (246)
338 3lb6_C IL-13, interleukin-13 r 99.7 1.2E-15 3.9E-20 141.7 19.5 224 244-485 91-334 (380)
339 1za6_B IGG heavy chain; immuno 99.7 1E-16 3.5E-21 148.0 12.4 170 98-269 9-209 (344)
340 3bkj_L WO2 IGG2A FAB fragment 99.7 2.1E-16 7.3E-21 138.9 13.6 169 97-266 42-240 (252)
341 1mju_H Immunoglobulin MS6-12; 99.7 1.4E-16 4.9E-21 137.4 12.2 183 97-282 8-222 (227)
342 2rgs_A I, IG gamma-2B heavy ch 99.7 6.9E-18 2.4E-22 144.7 3.7 162 1-167 23-205 (218)
343 1va9_A DOWN syndrome cell adhe 99.7 1.5E-16 5.2E-21 122.6 10.9 109 378-486 7-116 (122)
344 3omz_A Human vdelta1 gamma del 99.7 5.7E-16 2E-20 136.8 16.1 161 1-164 14-231 (259)
345 3bae_H WO2 IGG2A FAB fragment 99.7 5.1E-17 1.7E-21 140.5 9.0 166 1-170 12-218 (228)
346 2gjj_A A21 single-chain antibo 99.7 1.2E-16 4.1E-21 141.3 11.2 162 1-164 17-239 (264)
347 2edy_A Receptor-type tyrosine- 99.7 6.5E-17 2.2E-21 120.4 8.1 100 381-486 3-102 (103)
348 3fku_X Neutralizing antibody F 99.7 4.5E-16 1.6E-20 138.9 14.4 161 1-165 12-234 (280)
349 4ei6_B Vbeta16 XV19 type II na 99.7 1.1E-16 3.7E-21 140.3 10.1 161 1-167 14-219 (245)
350 3sob_L Antibody light chain; b 99.7 4.2E-16 1.4E-20 135.8 13.8 170 97-267 32-226 (237)
351 1x5h_A Neogenin; RGM binding, 99.7 5E-17 1.7E-21 127.2 7.0 115 368-486 1-115 (132)
352 2dru_A Chimera of CD48 antigen 99.7 3.7E-15 1.3E-19 123.1 18.5 153 97-272 7-176 (180)
353 1ccz_A Protein (CD58); LFA-3, 99.7 7.3E-16 2.5E-20 126.1 14.0 151 98-273 4-167 (171)
354 2ede_A Netrin receptor DCC; tu 99.7 7.2E-16 2.5E-20 117.1 12.8 100 381-486 3-107 (114)
355 2zg1_A Sialic acid-binding IG- 99.7 9.8E-16 3.4E-20 131.2 15.2 166 97-273 8-211 (214)
356 1op3_H FAB 2G12, heavy chain; 99.7 6.4E-17 2.2E-21 139.5 7.7 163 1-167 12-214 (225)
357 3nl4_L Antigen binding fragmen 99.7 5.5E-16 1.9E-20 132.6 13.2 162 97-261 9-198 (213)
358 3eow_R Poliovirus receptor; im 99.7 8E-17 2.7E-21 138.7 7.9 179 98-282 8-215 (221)
359 3m8o_H Immunoglobulin A1 heavy 99.7 2.4E-16 8.3E-21 135.6 10.8 161 1-168 12-213 (221)
360 2wqr_A IG epsilon chain C regi 99.7 4.7E-17 1.6E-21 148.9 6.6 162 105-267 25-204 (323)
361 1dn0_B IGM-kappa cold agglutin 99.7 4.2E-16 1.4E-20 134.9 12.2 173 1-176 12-225 (232)
362 1c1e_H Catalytic antibody 1E9 99.7 3.1E-16 1E-20 134.8 11.2 173 98-273 9-216 (219)
363 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 9E-16 3.1E-20 136.2 14.5 162 1-164 27-254 (268)
364 1nkr_A P58-CL42 KIR; inhibitor 99.7 2.1E-16 7.1E-21 133.7 9.6 154 99-263 17-183 (201)
365 3q5y_A TCR N15 beta; IG, T cel 99.7 3E-16 1E-20 136.9 10.7 160 1-167 14-213 (240)
366 1eer_B Epobp, erythropoietin r 99.7 5.6E-16 1.9E-20 133.3 12.2 195 280-489 22-225 (227)
367 2dlh_A Receptor-type tyrosine- 99.7 1.3E-16 4.4E-21 122.8 7.3 111 368-486 1-114 (121)
368 1uen_A KIAA0343 protein; immun 99.7 2.4E-16 8.3E-21 122.0 8.9 105 378-486 6-118 (125)
369 3auv_A SC-DSFV derived from th 99.7 1.9E-15 6.4E-20 134.7 15.6 183 97-279 20-256 (276)
370 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 2.5E-16 8.4E-21 135.7 9.3 171 99-273 10-219 (222)
371 4doh_R Interleukin-20 receptor 99.7 1.1E-14 3.9E-19 123.6 19.2 191 281-488 11-215 (221)
372 2ghw_B Anti-SARS SCFV antibody 99.7 1.8E-15 6.2E-20 132.6 14.9 176 99-276 12-241 (247)
373 3pl6_D MBP peptide / T-cell re 99.6 2E-16 6.8E-21 140.6 8.6 161 1-167 38-241 (268)
374 1x5f_A Neogenin; RGM binding, 99.6 1.4E-15 4.7E-20 116.7 12.1 104 378-486 10-113 (120)
375 1nqb_A Single-chain antibody f 99.6 3.4E-15 1.2E-19 131.3 16.2 178 98-276 9-232 (256)
376 3pl6_D MBP peptide / T-cell re 99.6 2.3E-15 7.8E-20 133.7 15.2 169 97-266 34-241 (268)
377 1b6u_A KIR2DL3, P58 killer cel 99.6 4.6E-16 1.6E-20 136.0 10.4 173 99-280 16-204 (257)
378 3d9a_H Heavy chain of hyhel10 99.6 3.7E-16 1.3E-20 133.3 9.5 168 99-270 10-207 (210)
379 1x4z_A Biregional cell adhesio 99.6 8.8E-16 3E-20 117.8 10.7 104 378-485 9-113 (121)
380 2djs_A Ephrin type-B receptor 99.6 3.4E-16 1.2E-20 117.5 8.1 100 381-487 3-102 (108)
381 2edd_A Netrin receptor DCC; tu 99.6 1.4E-15 4.7E-20 116.3 11.6 102 378-487 10-117 (123)
382 3esu_F Antibody 14B7* light ch 99.6 3E-15 1E-19 131.5 15.5 166 97-262 12-231 (250)
383 4ei6_B Vbeta16 XV19 type II na 99.6 3.4E-15 1.2E-19 130.7 15.7 169 97-266 10-219 (245)
384 1x5i_A Neogenin; RGM binding, 99.6 1.1E-15 3.8E-20 117.7 10.9 109 365-482 2-115 (126)
385 1hxm_B Gamma-delta T-cell rece 99.6 4E-16 1.4E-20 136.1 9.5 171 1-176 13-227 (242)
386 1f3r_B FV antibody fragment; I 99.6 7.9E-16 2.7E-20 135.6 11.4 180 99-280 10-248 (257)
387 3o3u_N Maltose-binding peripla 99.6 4.4E-16 1.5E-20 154.7 10.9 163 2-167 379-566 (581)
388 1x5g_A Neogenin; RGM binding, 99.6 1.2E-15 4.1E-20 116.2 10.8 107 371-486 2-109 (116)
389 2j6e_L IGM, FAB light chain; a 99.6 3.7E-16 1.3E-20 135.9 8.9 173 97-270 27-228 (234)
390 3nfj_J T cell receptor beta ch 99.6 2.8E-16 9.4E-21 137.7 8.1 167 1-169 13-221 (245)
391 2vol_A Murine IGG FC; FC, zinc 99.6 1.3E-16 4.6E-21 135.5 5.8 164 101-266 15-197 (207)
392 3liz_H 4C3 monoclonal antibody 99.6 2E-16 6.9E-21 139.0 7.0 170 1-176 12-218 (253)
393 2crm_A Fibronectin type-III do 99.6 8.8E-16 3E-20 117.6 9.7 111 368-486 1-113 (120)
394 1i1c_A IGG2A, IG gamma-2A chai 99.6 1.5E-16 5.3E-21 137.9 6.0 163 1-167 29-211 (239)
395 1nfd_E H57 FAB; complex (immun 99.6 1.7E-16 6E-21 135.6 6.2 168 97-266 7-201 (212)
396 1bpv_A Titin, A71, connectin; 99.6 4.6E-16 1.6E-20 116.4 7.6 99 384-486 8-107 (112)
397 2e7h_A Ephrin type-B receptor 99.6 8.1E-16 2.8E-20 115.5 8.9 95 383-486 5-102 (109)
398 3nfj_J T cell receptor beta ch 99.6 2.6E-15 9E-20 131.4 13.6 171 97-267 9-220 (245)
399 1moe_A Anti-CEA MAB T84.66; an 99.6 3E-15 1E-19 130.6 13.6 166 97-262 9-219 (240)
400 1wis_A KIAA1514 protein; FNIII 99.6 9.5E-16 3.2E-20 118.0 9.2 100 383-485 14-117 (124)
401 1x3d_A Fibronectin type-III do 99.6 1.1E-15 3.9E-20 116.6 9.5 110 368-486 1-111 (118)
402 1l6x_A Immunoglobulin gamma-1 99.6 1.8E-16 6E-21 134.8 5.4 162 2-167 16-197 (207)
403 2wbj_D OB TCR; transmembrane, 99.6 4.7E-16 1.6E-20 138.9 8.4 166 1-168 36-246 (279)
404 1x5l_A Ephrin type-A receptor 99.6 1.6E-15 5.6E-20 114.4 10.1 102 378-486 3-104 (111)
405 1wfn_A Sidekick 2; FN3, cell a 99.6 9.5E-16 3.2E-20 117.3 8.9 112 368-487 1-113 (119)
406 2crz_A Fibronectin type-III do 99.6 1.6E-15 5.4E-20 114.1 9.9 97 384-486 6-103 (110)
407 1x4x_A Fibronectin type-III do 99.6 1.8E-15 6.1E-20 112.8 10.0 97 383-487 4-100 (106)
408 2ed7_A Netrin receptor DCC; tu 99.6 3E-15 1E-19 114.6 11.4 99 383-486 14-112 (119)
409 2e3v_A Neural cell adhesion mo 99.6 1.3E-15 4.5E-20 116.6 9.3 100 383-486 5-105 (122)
410 2p1y_A Bispecific alpha/beta T 99.6 7.9E-15 2.7E-19 127.7 15.5 165 97-264 8-222 (238)
411 1pz5_B Heavy chain of FAB (SYA 99.6 1.9E-15 6.5E-20 129.9 11.3 169 98-272 9-216 (220)
412 3nl4_H Antigen binding fragmen 99.6 6.1E-15 2.1E-19 126.2 14.5 170 98-274 8-211 (215)
413 1c5d_H Monoclonal antibody aga 99.6 5.8E-16 2E-20 132.5 8.0 166 1-170 12-208 (215)
414 4doh_B Interleukin-20 receptor 99.6 1.7E-14 5.9E-19 121.1 16.9 186 281-488 9-202 (206)
415 3uzq_A Anti-dengue MAB 4E11; d 99.6 7E-15 2.4E-19 129.3 15.1 185 97-281 9-248 (253)
416 3knb_B Obscurin-like protein 1 99.6 9.1E-16 3.1E-20 114.1 8.0 92 87-180 13-107 (107)
417 2ed8_A Netrin receptor DCC; tu 99.6 2.5E-15 8.7E-20 112.2 10.3 93 387-487 8-100 (106)
418 2xqy_G A13-D6.3 monoclonal ant 99.6 4.4E-16 1.5E-20 137.0 7.1 163 1-167 18-214 (261)
419 3v6o_A Leptin receptor; recept 99.6 1.2E-14 4E-19 122.8 15.6 191 281-481 3-200 (206)
420 3bqu_C 3H6 FAB light chain; be 99.6 7.3E-17 2.5E-21 140.2 2.0 168 97-265 31-223 (233)
421 3bn9_D E2 FAB heavy chain; ant 99.6 6E-16 2E-20 135.5 7.5 163 1-167 12-219 (257)
422 2w59_A IGY FCU3-4; immunoglobu 99.6 1.3E-16 4.5E-21 137.9 3.3 160 2-167 26-217 (231)
423 3q5y_A TCR N15 beta; IG, T cel 99.6 9.8E-15 3.3E-19 127.3 15.1 169 97-266 10-213 (240)
424 2kbg_A N-CAM 2, neural cell ad 99.6 2.9E-15 9.9E-20 111.3 9.7 95 384-485 6-100 (114)
425 3umt_A SCFV heavy chain and li 99.6 7.6E-15 2.6E-19 129.3 14.2 179 99-279 12-247 (256)
426 3ux9_B SCFV antibody; five hel 99.6 2.4E-14 8.1E-19 126.2 17.4 168 97-264 10-236 (256)
427 2dm4_A Sortilin-related recept 99.6 4E-15 1.4E-19 111.5 10.6 91 387-485 8-100 (108)
428 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 8.3E-15 2.9E-19 129.0 14.4 168 97-267 11-236 (256)
429 3nl4_H Antigen binding fragmen 99.6 2.6E-16 9E-21 134.7 4.6 169 1-173 11-209 (215)
430 2rgs_A I, IG gamma-2B heavy ch 99.6 1.9E-16 6.5E-21 135.7 3.4 161 101-266 23-205 (218)
431 1x5z_A Receptor-type tyrosine- 99.6 2.2E-15 7.6E-20 114.6 8.9 108 368-486 1-108 (115)
432 1svz_A Immunoglobulin;, single 99.6 8.3E-15 2.8E-19 128.4 13.7 167 97-263 9-228 (247)
433 1dee_B IGM RF 2A2; FAB-IBP com 99.6 1.9E-14 6.5E-19 123.7 15.7 172 98-271 9-221 (223)
434 2ic2_A CG9211-PA, GH03927P; IH 99.6 5.1E-15 1.7E-19 111.4 10.5 92 385-481 4-104 (115)
435 2db8_A Tripartite motif protei 99.6 1.4E-15 4.7E-20 114.0 7.3 98 383-487 7-104 (110)
436 2znx_A SCFV; fluorotryptohpan, 99.6 6.4E-15 2.2E-19 128.5 12.7 167 97-263 9-222 (242)
437 3liz_H 4C3 monoclonal antibody 99.6 4E-15 1.4E-19 130.7 11.4 175 99-276 10-219 (253)
438 3bae_H WO2 IGG2A FAB fragment 99.6 2.5E-15 8.7E-20 129.8 9.9 171 99-272 10-221 (228)
439 1op3_H FAB 2G12, heavy chain; 99.6 3.6E-15 1.2E-19 128.5 10.7 168 99-268 10-216 (225)
440 3to4_D NKT vbeta2 (mouse varia 99.6 1.3E-15 4.6E-20 133.8 7.9 163 1-165 13-217 (253)
441 3qib_D 2B4 beta chain; IG doma 99.6 1E-15 3.4E-20 136.1 6.8 165 1-168 39-245 (270)
442 1wfu_A Unnamed protein product 99.6 4.5E-15 1.5E-19 111.7 9.3 103 379-487 8-114 (120)
443 2fbj_H IGA-kappa J539 FAB (hea 99.6 2.1E-14 7.1E-19 123.2 14.6 168 98-268 9-212 (220)
444 3gkz_A Anti-methamphetamine si 99.6 2.4E-14 8.2E-19 126.2 15.2 180 99-279 18-251 (257)
445 1x5j_A Neogenin; RGM binding, 99.6 3.8E-15 1.3E-19 111.9 7.7 99 383-487 5-107 (113)
446 2yux_A Myosin-binding protein 99.6 6E-15 2.1E-19 112.8 8.9 93 383-480 14-106 (120)
447 2yuw_A Myosin binding protein 99.6 3.9E-15 1.3E-19 112.0 7.7 98 384-485 5-102 (110)
448 1uey_A KIAA0343 protein; immun 99.6 8.6E-15 2.9E-19 113.3 9.9 118 269-396 7-126 (127)
449 1qok_A MFE-23 recombinant anti 99.6 3.4E-14 1.2E-18 126.9 15.2 177 98-277 35-268 (282)
450 1dn0_B IGM-kappa cold agglutin 99.6 4.9E-14 1.7E-18 121.9 15.6 175 99-275 10-225 (232)
451 1l6x_A Immunoglobulin gamma-1 99.6 1.3E-15 4.5E-20 129.4 5.5 160 102-266 16-197 (207)
452 1oga_E TRBC1, T-cell receptor 99.6 4.1E-15 1.4E-19 130.5 8.9 165 1-168 15-219 (252)
453 2xqy_G A13-D6.3 monoclonal ant 99.6 1.6E-14 5.5E-19 127.0 12.5 169 97-268 14-216 (261)
454 1bec_A 14.3.D T cell antigen r 99.6 7.3E-15 2.5E-19 127.8 10.2 163 1-166 11-211 (238)
455 3knb_B Obscurin-like protein 1 99.6 5.9E-15 2E-19 109.7 8.1 77 1-85 25-105 (107)
456 1x5y_A Myosin binding protein 99.6 4.3E-15 1.5E-19 111.9 7.2 98 383-484 5-102 (111)
457 1hxm_B Gamma-delta T-cell rece 99.6 1.9E-14 6.4E-19 125.5 12.3 177 97-275 9-227 (242)
458 2aty_A Complement receptor chi 99.6 1.3E-14 4.5E-19 135.0 11.9 161 2-166 181-361 (376)
459 2dn7_A Receptor-type tyrosine- 99.6 1.3E-14 4.6E-19 108.6 9.6 96 381-485 3-98 (107)
460 2yrz_A Integrin beta-4; GP150, 99.6 8.8E-15 3E-19 111.7 8.7 100 378-484 10-110 (118)
461 2gjj_A A21 single-chain antibo 99.6 2.3E-14 7.9E-19 126.6 12.7 167 97-263 13-239 (264)
462 3g9v_A Interleukin 22 receptor 99.6 1.5E-14 5E-19 121.8 10.7 183 282-482 11-208 (211)
463 3m8o_H Immunoglobulin A1 heavy 99.6 5.5E-14 1.9E-18 120.8 14.5 167 98-267 9-213 (221)
464 3o3u_N Maltose-binding peripla 99.6 2.3E-14 7.9E-19 142.3 13.7 168 97-266 374-566 (581)
465 1x5x_A Fibronectin type-III do 99.6 1.1E-14 3.7E-19 109.3 8.7 95 386-487 7-103 (109)
466 3knb_A Titin; IG-like, titin, 99.5 1.8E-14 6.1E-19 105.7 9.1 79 1-85 17-99 (100)
467 3juy_B 3B3 single chain varian 99.5 5E-14 1.7E-18 124.0 13.7 168 97-265 14-244 (256)
468 3knb_A Titin; IG-like, titin, 99.5 2.3E-14 7.8E-19 105.2 9.5 89 87-177 5-98 (100)
469 2wbj_D OB TCR; transmembrane, 99.5 6.2E-14 2.1E-18 125.1 14.2 170 97-266 32-245 (279)
470 1i1c_A IGG2A, IG gamma-2A chai 99.5 3.1E-15 1.1E-19 129.7 5.2 161 101-266 29-211 (239)
471 1x5a_A Ephrin type-A receptor 99.5 3.1E-14 1.1E-18 105.9 9.9 94 381-486 5-100 (107)
472 2edb_A Netrin receptor DCC; tu 99.5 4.6E-14 1.6E-18 106.8 11.0 99 378-485 9-107 (116)
473 3to4_D NKT vbeta2 (mouse varia 99.5 7.6E-14 2.6E-18 122.6 14.1 167 97-264 9-217 (253)
474 1uey_A KIAA0343 protein; immun 99.5 3.6E-14 1.2E-18 109.8 10.5 97 383-485 13-112 (127)
475 4acp_A IG gamma-1 chain C regi 99.5 1.6E-15 5.6E-20 130.9 3.1 198 62-265 1-217 (240)
476 2w59_A IGY FCU3-4; immunoglobu 99.5 3.2E-15 1.1E-19 129.2 4.8 164 100-266 24-217 (231)
477 3f7q_A Integrin beta-4, GP150; 99.5 2.3E-13 8E-18 117.9 16.5 205 195-428 19-231 (234)
478 3fku_X Neutralizing antibody F 99.5 3.1E-14 1.1E-18 126.9 10.8 183 97-280 8-253 (280)
479 3omz_A Human vdelta1 gamma del 99.5 8.9E-14 3E-18 122.7 13.6 165 97-262 10-230 (259)
480 1c5d_H Monoclonal antibody aga 99.5 4.9E-14 1.7E-18 120.4 11.6 167 99-270 10-209 (215)
481 1ypz_F T-cell receptor gamma c 99.5 1.5E-14 5.1E-19 124.9 8.4 164 1-168 13-217 (230)
482 2ee3_A Collagen alpha-1(XX) ch 99.5 4.2E-14 1.4E-18 104.5 9.4 92 384-485 5-96 (108)
483 3tv3_H PGT128 heavy chain, IG 99.5 2.7E-15 9.4E-20 130.4 3.5 170 1-174 12-233 (239)
484 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 7.7E-14 2.6E-18 123.7 12.8 167 97-263 23-254 (268)
485 1uem_A KIAA1568 protein; immun 99.5 2E-14 7E-19 109.5 7.8 97 383-485 12-110 (117)
486 3shs_A HOC head outer capsid p 99.5 6.5E-12 2.2E-16 105.0 23.2 243 100-364 13-278 (304)
487 3t04_D Monobody 7C12; engineer 99.5 7.9E-14 2.7E-18 102.8 10.5 90 385-481 6-98 (103)
488 3bpo_C Interleukin-13 receptor 99.5 4.1E-13 1.4E-17 121.9 17.4 180 279-478 4-189 (314)
489 3bn9_D E2 FAB heavy chain; ant 99.5 5.3E-14 1.8E-18 123.1 10.8 167 99-268 10-221 (257)
490 3b83_A Ten-D3; beta sheet, com 99.5 1.3E-13 4.5E-18 101.1 11.2 87 387-482 2-89 (100)
491 3qhz_H Human monoclonal antibo 99.5 1.7E-14 5.6E-19 125.0 7.3 169 1-175 12-226 (232)
492 2cqv_A MLCK, myosin light chai 99.5 1.2E-13 4.2E-18 104.6 11.0 95 87-183 7-104 (114)
493 1ypz_E T cell receptor delta, 99.5 4.7E-14 1.6E-18 119.5 9.2 160 1-168 13-199 (207)
494 1oga_E TRBC1, T-cell receptor 99.5 5E-13 1.7E-17 117.2 16.1 169 97-266 11-218 (252)
495 2rb8_A Tenascin; beta sheet,lo 99.5 1.6E-13 5.3E-18 101.5 10.9 94 386-489 2-96 (104)
496 1wf5_A Sidekick 2 protein; FNI 99.5 5.3E-14 1.8E-18 107.9 8.1 96 385-485 16-114 (121)
497 2cqv_A MLCK, myosin light chai 99.5 1.6E-13 5.3E-18 104.0 10.5 77 1-85 19-99 (114)
498 2dju_A Receptor-type tyrosine- 99.5 1.2E-13 4E-18 103.2 9.5 93 385-486 6-99 (106)
499 2gys_A Cytokine receptor commo 99.5 1.5E-12 5E-17 123.3 19.2 205 253-472 84-312 (419)
500 2edj_A Roundabout homolog 2; K 99.5 1.6E-13 5.3E-18 101.3 9.9 91 87-179 8-99 (100)
No 1
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=1.3e-45 Score=349.27 Aligned_cols=365 Identities=23% Similarity=0.356 Sum_probs=287.7
Q ss_pred eEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEEecC-----CCcEEEee---CCCEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIGS-----GGRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~~~~-----~~~~~~~~---~~~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
+..+.+|+++.|.|.+.|.|.+.+.|+++ |..+.. +.++.+.. .+.|.|.++..+|+|.|+|.|.|..|.
T Consensus 9 ~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 88 (389)
T 2jll_A 9 NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGG 88 (389)
T ss_dssp CEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred ceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCC
Confidence 35678899999999999999999999999 888764 34555543 346999999999999999999999999
Q ss_pred eeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeee--ecCCeEEE
Q psy14886 168 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN--IDGGLLEI 245 (505)
Q Consensus 168 ~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i 245 (505)
....+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|++++..+....... .... .....|.|
T Consensus 89 ~~~~~~l~V~~~P~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~--~i~W~~~g~~l~~~~~~~---~~~~~~~~~~~L~i 162 (389)
T 2jll_A 89 HQKSMYLDIEYAPKFIS-NQTIYYSWEGNPINISCDVKSNPPA--SIHWRRDKLVLPAKNTTN---LKTYSTGRKMILEI 162 (389)
T ss_dssp EEEEEEEEEEEEEEECC-SCCEEEECTTCCEEEEECEEEESCC--EEEEEETTEESSCTTCTT---EEEEECSSCEEEEE
T ss_pred cceEEEEEEEeCCEEec-CcceEEeccCCEEEEEEEEEecCCC--eEEEEECCccCCcccCce---EEEeccCCEEEEEE
Confidence 88889999987776643 2334467889999999999998764 667999998886532111 1111 12357999
Q ss_pred ecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCC-CCCCCCceEEEEEEeCCCCCe
Q psy14886 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTW 324 (505)
Q Consensus 246 ~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~-~~~~~i~~y~v~~~~~~~~~w 324 (505)
..+...|.|.|+|.|.|..|.....+.+.+..+|.+|..+.+......++.|+|.++. .++.++..|.++++..+...|
T Consensus 163 ~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~ 242 (389)
T 2jll_A 163 APTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIW 242 (389)
T ss_dssp CCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCC
T ss_pred CCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCccc
Confidence 9999999999999999999999889999999999999888888889999999999876 445688899999999888888
Q ss_pred EEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEE
Q psy14886 325 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 404 (505)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~ 404 (505)
....... ....+.+.+ |.+++.|.|+|.|.|..|.+.++... .+.+.+..|+.+|. +.......+++.
T Consensus 243 ~~~~~~~---------~~~~~~i~~-l~~~~~y~~~v~A~N~~G~~~~s~~~-~~~t~~~~~p~~p~-~~~~~~~~~~v~ 310 (389)
T 2jll_A 243 KIVRSHG---------VQTMVVLNN-LEPNTTYEIRVAAVNGKGQGDYSKIE-IFQTLPVREPSPPS-IHGQPSSGKSFK 310 (389)
T ss_dssp EEEECST---------TCSEEEECS-CCTTCEEEEEEEEEESSCBCCCCCCE-EEECCCCCCCCCCC-EEEEEETTTEEE
T ss_pred EEeeccC---------CcceEEECC-ccCCCEEEEEEEEEcCCccCCCCcce-EEEecCCCCCCCCc-cccccCcCCEEE
Confidence 7543321 123445555 99999999999999999999888764 56777777778885 555557889999
Q ss_pred EEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEee
Q psy14886 405 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWH 484 (505)
Q Consensus 405 l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t 484 (505)
|.|++ +.+.+++|++|.|+|+..+...|...... .. ....+.|.+|.|++.|.|+|+|+|.+|.|++|++ .+.|
T Consensus 311 l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~--~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T 384 (389)
T 2jll_A 311 LSITK--QDDGGAPILEYIVKYRSKDKEDQWLEKKV-QG--NKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSM 384 (389)
T ss_dssp EEECC--CCCCSSCCCEEEEEEEC-----CCBCCEE-CT--TCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEEC
T ss_pred EEEEC--CCCCCCcccEEEEEEEeCCCCcceeEeec-cC--CcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecC
Confidence 99998 56788999999999999776667632211 12 2356889999999999999999999999999977 5555
Q ss_pred cc
Q psy14886 485 DP 486 (505)
Q Consensus 485 ~p 486 (505)
.|
T Consensus 385 ~~ 386 (389)
T 2jll_A 385 PP 386 (389)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 2
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=8.6e-39 Score=302.50 Aligned_cols=353 Identities=21% Similarity=0.281 Sum_probs=254.3
Q ss_pred CCCCceEEEEEEeccCCCeEEEEEC--CEECcCCCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 2 DNQADLTWTCEAFGVPDVTYSWFRN--GELLNSETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
.+|++++|.|.+.|.|.+.|+|+|+ +..+..... ...+++.+. .++|.|.+++ .+|+|.|+|.|.|..|..
T Consensus 13 ~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~a~n~~g~~ 89 (389)
T 2jll_A 13 YENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDK--SLDGRIEVKGQHGSSSLHIKDVK-LSDSGRYDCEAASRIGGH 89 (389)
T ss_dssp ETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--C--CSSSSEEEEECSSEEEEEEESCC-GGGCEEEEEEEECSSCEE
T ss_pred eCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcC--CCCCeEEEeccCCcceEEEcccC-hhhCEEEEEEEEeCCCCc
Confidence 4799999999999999999999999 888763211 123566553 3589999999 999999999999999988
Q ss_pred EeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCC--cEEEeeCC---CEEEcCCC
Q psy14886 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENG---NLLISPVS 150 (505)
Q Consensus 76 ~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~--~~~~~~~~---~l~i~~v~ 150 (505)
...+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.... +..+..++ .|.|.++.
T Consensus 90 ~~~~~l~V~~-~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~ 166 (389)
T 2jll_A 90 QKSMYLDIEY-APKFISNQ--TIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTS 166 (389)
T ss_dssp EEEEEEEEEE-EEEECCSC--CEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCS
T ss_pred ceEEEEEEEe-CCEEecCc--ceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCC
Confidence 8889999985 66665433 33468899999999999999999999999999887543 44444333 59999999
Q ss_pred CCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeec----CCCCeEEEEEeCCEEecCC
Q psy14886 151 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE----ELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~~~~~~w~~~~~~~~~~ 226 (505)
..|.|.|+|.|.|..|.....+.+.+...|..... .......+..+.|.|..... +...+.+.|.+++.....
T Consensus 167 ~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~--~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~- 243 (389)
T 2jll_A 167 DNDFGRYNCTATNHIGTRFQEYILALADVPSSPYG--VKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWK- 243 (389)
T ss_dssp TTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEE--EEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCE-
T ss_pred hhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcc--eEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccE-
Confidence 99999999999999999888888877555442211 01122345678899975322 222346678776532110
Q ss_pred CCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc----CCCCCCCceEEEEEeCCeEEEEeecC
Q psy14886 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDG 302 (505)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~----~~p~~p~~~~~~~~~~~~v~l~w~~~ 302 (505)
..........+.|..+...+.|.|+|.|.|..|....+..+.+. .+|.+|. +.......+++.|+|.++
T Consensus 244 ------~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p~-~~~~~~~~~~v~l~W~~p 316 (389)
T 2jll_A 244 ------IVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPS-IHGQPSSGKSFKLSITKQ 316 (389)
T ss_dssp ------EEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCCC-EEEEEETTTEEEEEECCC
T ss_pred ------EeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCCc-cccccCcCCEEEEEEECC
Confidence 00011123679999999999999999999999875433322222 2566664 666667899999999999
Q ss_pred CCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccC
Q psy14886 303 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 381 (505)
Q Consensus 303 ~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t 381 (505)
.++++++.+|.|+|+..+...|..... .......+.+.+|.+++.|.|+|+|.|..|.|.+|.. .+.|
T Consensus 317 ~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~--~~~T 384 (389)
T 2jll_A 317 DDGGAPILEYIVKYRSKDKEDQWLEKK---------VQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY--EFSM 384 (389)
T ss_dssp CCCSSCCCEEEEEEEC-----CCBCCE---------ECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE--EEEC
T ss_pred CCCCCcccEEEEEEEeCCCCcceeEee---------ccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee--EecC
Confidence 888899999999999876666653211 1123333444459999999999999999999988765 3444
No 3
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=324.19 Aligned_cols=442 Identities=16% Similarity=0.153 Sum_probs=301.7
Q ss_pred CCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEee-EEE
Q psy14886 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS-AQL 81 (505)
Q Consensus 3 ~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l 81 (505)
.++.+.|.|.+.|.|.+.+.|.|+|..+.. .. ...+.|..+......+.|.|.+.+..|..... +.+
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~-------~~-----~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~ 157 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRT-------WN-----RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKV 157 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSS-------CE-----EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEE
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCc-------ee-----EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEe
Confidence 356899999999999999999999987652 11 13455555420334578888777766654332 222
Q ss_pred EEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEE-EE--ECCEEecCCCcEEEe---eCCCEEEcCCCCCC
Q psy14886 82 RVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFV-WK--KDGNIIGSGGRRKIF---ENGNLLISPVSRDD 153 (505)
Q Consensus 82 ~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~-W~--~~g~~~~~~~~~~~~---~~~~l~i~~v~~~d 153 (505)
.+.. .+|.+. .+ .+..+.+|+++.|.|.+.|.|.+.+. |+ ++|..+.......+. ..++|.|.++...|
T Consensus 158 ~~~~~~~~p~~~-~~--~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d 234 (731)
T 2v5y_A 158 LGHPCTRTPHFL-RI--QNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRD 234 (731)
T ss_dssp ESSCCSSSCEEC-CC--CCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTT
T ss_pred eecccccccccc-cc--cceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEccccccc
Confidence 2211 345554 22 45789999999999999999999887 87 677766432211111 12479999999999
Q ss_pred CEEEEEEEEcCCCc-eeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeec----CCCCeEEEEEeCCEEecCCCC
Q psy14886 154 SGIYSCTATNVHGM-DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE----ELLDVAYIWTHNGVRIGNMDL 228 (505)
Q Consensus 154 ~G~y~C~~~~~~g~-~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~~~~~~w~~~~~~~~~~~~ 228 (505)
.|.|+|.|.|..|. ....+.|.|..+|.... +..........+.|.|..... +...+.+.|...+. .+
T Consensus 235 ~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~--~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~-----~~ 307 (731)
T 2v5y_A 235 AGKYRCMIRTEGGVGISNYAELVVKEPPVPIA--PPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASG-----SW 307 (731)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEECCCCBSS--CCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSS-----SC
T ss_pred CeEEEEEEECCCCCcceeeEEEEEecCCCCCC--CcceeccCCceEEEEeCCcccCCCCccEEEEEEEEECCC-----Cc
Confidence 99999999999997 56668888877665432 222333445678888876432 22234556655321 11
Q ss_pred CcccCCeeeecCCeEEEecCCCCCCEEEEEEEE--ecCCcEEEEEEEEE----cCCCCCCCceEEEEEeCCeEEEEeecC
Q psy14886 229 NELETPNINIDGGLLEITNASFADAGEYECVVK--STVGKISTKTTVIV----EGPPGLPGGVQVVEVHKTSATIQWTDG 302 (505)
Q Consensus 229 ~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~--n~~g~~~~~~~l~v----~~~p~~p~~~~~~~~~~~~v~l~w~~~ 302 (505)
. .........+.|..+.....+.|+|.|. |..|....+..+.+ ..+|.+|.++.+.....+++.|+|+++
T Consensus 308 ~----~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p 383 (731)
T 2v5y_A 308 N----DRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPF 383 (731)
T ss_dssp E----EEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECC
T ss_pred e----EEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECC
Confidence 0 1112234688999999999999999999 99887543322222 345678888999999999999999998
Q ss_pred CCC--CCCCceEEEEEEeCCCCCeEEeee-ccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCc
Q psy14886 303 ATN--GRPITHYKIIARTNWNSTWFNVSE-HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 379 (505)
Q Consensus 303 ~~~--~~~i~~y~v~~~~~~~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~ 379 (505)
... ...+.+|.|+|+......|..... ... .......+.+.+ |.|++.|.|+|.|.|..|.+. |... .+
T Consensus 384 ~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~-L~p~t~Y~~~V~A~n~~G~s~-S~~~-~~ 455 (731)
T 2v5y_A 384 GYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWD-----TENSHPQHTITN-LSPYTNVSVKLILMNPEGRKE-SQEL-IV 455 (731)
T ss_dssp CHHHHCSSSCEEEEEEEEESSSSEEEEEEEECC-----SSCSSCEEEECS-CCSSCEEEEEEEEECSSCEEE-CCCE-EE
T ss_pred CcccccceeeeEEEEEEEccCCCCccceeEEEE-----ecCCcceEEECC-CCCCCEEEEEEEEEcCCCCCC-CceE-EE
Confidence 632 456789999998876544432211 000 001223444554 999999999999999999985 5443 67
Q ss_pred cCCCCCCCCCC-ceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCC-------cEEEEeeecCceeeEEEE
Q psy14886 380 NTPADKPYQAP-SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-------FQSETLKEYGNVGIAVVR 451 (505)
Q Consensus 380 ~t~~~~p~~~P-~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 451 (505)
.|.+..|..+| .++.... ..++|.|.|++ +...+|.|++|+|+|+..+... +.... .... ..+.+.
T Consensus 456 ~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~--P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~ 529 (731)
T 2v5y_A 456 QTDEDLPGAVPTESIQGST-FEEKIFLQWRE--PTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRV-SKLG--NETHFL 529 (731)
T ss_dssp ECCCCCCCCCCTTTCEEEE-ETTEEEEECCC--CSCCSSCCCEEEEEEEEEEECC---CCCCCEEEE-EEET--TCCEEE
T ss_pred EccCCCCCCCCcceEEeee-cCCeEEEEEcC--CCCCCCCccceEEEEEECcCCCccccccCcceEE-eecC--CcceEE
Confidence 78787777665 3555543 46799999998 4567889999999999876221 11111 1111 345789
Q ss_pred cCCccceeeEEEEEEEecCCCCCCCCceEEEeec
Q psy14886 452 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 452 l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
|.+|.|++.|.|+|.|+|.+|.|++|. +.+.|.
T Consensus 530 i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~ 562 (731)
T 2v5y_A 530 FFGLYPGTTYSFTIRASTAKGFGPPAT-NQFTTK 562 (731)
T ss_dssp ECSCCTTEEEEEEEEEEETTEEEEEEE-EEEECC
T ss_pred ecCCCCCCEEEEEEEEEeCCccCCCcc-cEEEcC
Confidence 999999999999999999999999995 556554
No 4
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=2.9e-36 Score=298.55 Aligned_cols=430 Identities=20% Similarity=0.315 Sum_probs=289.4
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
+.+|+.++|.|.+.|.|.+.|+|+|++..+.. ..++.+. ..+|.|.+++ .+|+|.|+|.|.|..|...
T Consensus 17 v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~-------~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~N~~g~~~ 88 (570)
T 3b43_A 17 AAIGEPITLQCKVDGTPEIRIAWYKEHTKLRS-------APAYKMQFKNNVASLVINKVD-HSDVGEYTCKAENSVGAVA 88 (570)
T ss_dssp ECTTSCEEEEEEEESSSSCEEEEECSSSBCCC-------CSSEEEECCTTEEEEEESSCC-GGGCEEEEEEEEETTEEEE
T ss_pred EcCCCEEEEEEEEccCCCCEEEEEECCEEccC-------CCCEEEEEECCEEEEEEccCC-hhhCEEEEEEEEeCCceEE
Confidence 46899999999999999999999999998863 3444432 2579999999 9999999999999998887
Q ss_pred eeEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe---eCCCEEEcCCCC
Q psy14886 77 SSAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSR 151 (505)
Q Consensus 77 ~~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~---~~~~l~i~~v~~ 151 (505)
..+.+.|.. .+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....+.... ...+|.|.++..
T Consensus 89 ~~~~l~v~~~~~~p~~~~~~--~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~ 166 (570)
T 3b43_A 89 SSAVLVIKERKLPPSFARKL--KDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQ 166 (570)
T ss_dssp EEEEEEECCCCCCCEESSCC--CCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCG
T ss_pred EEEEEEECCCCCCCcccccC--CCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCCh
Confidence 777777754 345555443 4466789999999999999999999999999998765554332 234699999999
Q ss_pred CCCEEEEEEEEcCCCceeeeEEEEEEe--CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCC
Q psy14886 152 DDSGIYSCTATNVHGMDESKGRLIVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~~~~~~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~ 229 (505)
+|+|.|+|.|.|..|.....+.+.|.. .|+.....+....+..|+.+.|.|.+.+.|.+ .+.|++++..+.....
T Consensus 167 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p--~i~W~k~g~~i~~~~~- 243 (570)
T 3b43_A 167 SHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPI--KITWAKDNREIRPGGN- 243 (570)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCC--EEEEEETTEECCTTSS-
T ss_pred HHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCC--EEEEEECCEECcCCCc-
Confidence 999999999999999888777777754 34444444556677899999999999988765 6679999998865321
Q ss_pred cccCCeee--ecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCc--eEEEEEeCCeEEEEeecCCCC
Q psy14886 230 ELETPNIN--IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATN 305 (505)
Q Consensus 230 ~~~~~~~~--~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~--~~~~~~~~~~v~l~w~~~~~~ 305 (505)
.... .....|.|..+..+|.|.|+|.|.|..|..+..+.|.|..+|..... .......+..+.|.|...
T Consensus 244 ----~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~--- 316 (570)
T 3b43_A 244 ----YKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIG--- 316 (570)
T ss_dssp ----EEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEE---
T ss_pred ----EEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEe---
Confidence 1111 12357999999999999999999999999988999988876642111 111234567788888742
Q ss_pred CCCCceEEEEEEeCCCCCeEEeeeccccc---eeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCC
Q psy14886 306 GRPITHYKIIARTNWNSTWFNVSEHVIGK---EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382 (505)
Q Consensus 306 ~~~i~~y~v~~~~~~~~~w~~~~~~~~~~---~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~ 382 (505)
+.|...+.|. .....+... ..........+.+.+ +...+.+.|+|.|.|..|....+... .+...
T Consensus 317 g~P~p~v~W~----------k~~~~l~~~~~~~~~~~~~~~~L~i~~-v~~~D~G~Y~C~a~N~~g~~~~~~~l-~V~~~ 384 (570)
T 3b43_A 317 GSPEIKVLWY----------KDETEIQESSKFRMSFVESVAVLEMYN-LSVEDSGDYTCEAHNAAGSASSSTSL-KVKEP 384 (570)
T ss_dssp SSSSCEEEEE----------ETTEECCCSSSEEEEEETTEEEEEEES-CCGGGCEEEEEEEEBTTBCCEEEEEE-CEECC
T ss_pred eCCCCEEEEe----------ECCEECCCCCcEEEEEECCEEEEEECC-CCcccCEEEEEEEEeCCCEEEEEEEE-EecCC
Confidence 2333333332 211111100 000111223344445 99999999999999999976433221 22211
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcC-----CCCcEEEEeeecCceeeEEEEcCCccc
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-----DTEFQSETLKEYGNVGIAVVRIPSEFY 457 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~L~p 457 (505)
+.. ...|..+.+. ....+.|.+.. . +..+ -.|.|...+ +..+. .... .....+.|.++.+
T Consensus 385 P~~-~~~~~~~~~~--~G~~v~l~C~~--~--g~P~---p~v~W~k~g~~l~~~~~~~--~~~~---~~~~~L~i~~v~~ 449 (570)
T 3b43_A 385 PVF-RKKPHPVETL--KGADVHLECEL--Q--GTPP---FQVSWHKDKRELRSGKKYK--IMSE---NFLTSIHILNVDS 449 (570)
T ss_dssp CEE-CSCCCCEEEC--TTCCEEEEEEE--E--SSSS---CCCEEEETTEECCSSSSEE--EEEE---TTEEEEEECSCCG
T ss_pred Cee-ecCCCceeec--CCCEEEEEEEE--e--cCCC---CEEEEEECCEECcCCCCEE--EEEc---CCEEEEEECCCCh
Confidence 111 1233444433 24556777654 1 1111 134555554 11111 1111 1123556777776
Q ss_pred eeeEEEEEEEecCCCCCCCC
Q psy14886 458 YTEYEVKVQAINDVGPGPES 477 (505)
Q Consensus 458 ~~~Y~~~v~a~n~~G~g~~s 477 (505)
.-.-.++..|.|.+|....+
T Consensus 450 ~D~G~Y~C~A~N~~G~~~~~ 469 (570)
T 3b43_A 450 ADIGEYQCKASNDVGSDTCV 469 (570)
T ss_dssp GGCEEEEEEEECSSCEEEEE
T ss_pred hhCEEEEEEEEECCCeEEEE
Confidence 66677788999999975543
No 5
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.9e-36 Score=299.84 Aligned_cols=341 Identities=22% Similarity=0.359 Sum_probs=251.3
Q ss_pred CCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE----ECCeEEEEcCCCCCCCeEEEEEEEcccCceEe
Q psy14886 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI----QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~----~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~ 77 (505)
.+|+.++|.|.+.|.|.+.|+|+|||..+.. ..++.. ...+|.|.+++ .+|+|.|+|.|.|..|....
T Consensus 114 ~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~-------~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~a~n~~g~~~~ 185 (570)
T 3b43_A 114 TLGFPVAFECRINGSEPLQVSWYKDGELLKD-------DANLQTSFIHNVATLQILQTD-QSHVGQYNCSASNPLGTASS 185 (570)
T ss_dssp ETTSCEEEEEEEESSSSCEEEEEETTEECCC-------CSSEEEEEETTEEEEEESSCC-GGGCEEEEEEEEETTEEEEE
T ss_pred cCCCeEEEEEEEccCCCCEEEEEECCEECcC-------CCCEEEEEECCEEEEEECcCC-hHHCEEEEEEEEeCCcEEEE
Confidence 3699999999999999999999999999873 223221 23689999999 99999999999999888877
Q ss_pred eEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEee---CCCEEEcCCCCC
Q psy14886 78 SAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRD 152 (505)
Q Consensus 78 ~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~---~~~l~i~~v~~~ 152 (505)
.+.+.|.. .+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+..+.++.+.. ...|.|.++..+
T Consensus 186 ~~~l~v~~~~~pp~~~~~p--~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~ 263 (570)
T 3b43_A 186 SAKLTLSEHEVPPFFDLKP--VSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKG 263 (570)
T ss_dssp EEEEEEECCCCCCEEEECC--CCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGG
T ss_pred EEEEEEcCCCCCCccccCC--ceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcc
Confidence 77777764 345555444 33457899999999999999999999999999987766554432 246999999999
Q ss_pred CCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCccc
Q psy14886 153 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232 (505)
Q Consensus 153 d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 232 (505)
|+|.|+|.|.|..|.....+.|.|..+|.+.........+..|+.+.|.|.+.+.|.+ .+.|++++..+.......
T Consensus 264 D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p--~v~W~k~~~~l~~~~~~~-- 339 (570)
T 3b43_A 264 DAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEI--KVLWYKDETEIQESSKFR-- 339 (570)
T ss_dssp GCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSC--EEEEEETTEECCCSSSEE--
T ss_pred cCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCC--EEEEeECCEECCCCCcEE--
Confidence 9999999999999998888999998888776655555567899999999999988765 667999999886532100
Q ss_pred CCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCce-EEEEEeCCeEEEEeecCCCCCCCCce
Q psy14886 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV-QVVEVHKTSATIQWTDGATNGRPITH 311 (505)
Q Consensus 233 ~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~-~~~~~~~~~v~l~w~~~~~~~~~i~~ 311 (505)
.........|.|.++..+|.|.|+|.|.|..|.......|.|..+|.....+ .+....+..+.|.|... +.|...
T Consensus 340 -~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~---g~P~p~ 415 (570)
T 3b43_A 340 -MSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQ---GTPPFQ 415 (570)
T ss_dssp -EEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEE---SSSSCC
T ss_pred -EEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEe---cCCCCE
Confidence 0111123579999999999999999999999999999999998877422111 12334567788888742 222222
Q ss_pred EEEEEEeCCCCCeEEeeeccccce---eeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 312 YKIIARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 312 y~v~~~~~~~~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
+.| ......+.... ...........+.+ +...+.+.|+|.|.|..|...
T Consensus 416 v~W----------~k~g~~l~~~~~~~~~~~~~~~~L~i~~-v~~~D~G~Y~C~A~N~~G~~~ 467 (570)
T 3b43_A 416 VSW----------HKDKRELRSGKKYKIMSENFLTSIHILN-VDSADIGEYQCKASNDVGSDT 467 (570)
T ss_dssp CEE----------EETTEECCSSSSEEEEEETTEEEEEECS-CCGGGCEEEEEEEECSSCEEE
T ss_pred EEE----------EECCEECcCCCCEEEEEcCCEEEEEECC-CChhhCEEEEEEEEECCCeEE
Confidence 332 22211111000 00000112344444 899999999999999999764
No 6
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=291.55 Aligned_cols=356 Identities=18% Similarity=0.247 Sum_probs=267.8
Q ss_pred CCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCC-CCCCCEEEEEEEEcCCCceeee-EEEEEE---e
Q psy14886 104 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPV-SRDDSGIYSCTATNVHGMDESK-GRLIVL---H 178 (505)
Q Consensus 104 g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v-~~~d~G~y~C~~~~~~g~~~~~-~~l~v~---~ 178 (505)
...+.|.|.+.|.|.+.+.|.++|..+..-. ...+.|..+ .....+.|.|.+.+..|..... +.+.+. .
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~ 164 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWN------RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTR 164 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCE------EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSS
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCcee------EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccc
Confidence 4589999999999999999999997653211 123555554 2333478999887777765543 222221 2
Q ss_pred CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEE--eCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEE
Q psy14886 179 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256 (505)
Q Consensus 179 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~--~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 256 (505)
+|.+. .+....+..|+.+.|.|.+.+.|.|.+. .|. ++|..+........... ...+.|.|..+...|.|.|
T Consensus 165 ~p~~~--~~~~~~v~~G~~v~l~C~~~g~P~p~i~-~W~~~~~g~~l~~~~~~~~~~~---~~~~~l~I~~~~~~d~g~Y 238 (731)
T 2v5y_A 165 TPHFL--RIQNVEVNAGQFATFQCSAIGRTVAGDR-LWLQGIDVRDAPLKEIKVTSSR---RFIASFNVVNTTKRDAGKY 238 (731)
T ss_dssp SCEEC--CCCCEEEETTSCEEEEEEEESCCCTTCE-EEEEESSSCCEEEEEEEECCSS---EEEEEEEECSCCTTTCEEE
T ss_pred ccccc--cccceEEeCCCcEEEEEEeCCCCCCcee-EEEecCCCccccccceEEeccc---cceEEEEEcccccccCeEE
Confidence 34433 3457888999999999999999988765 255 67765543211000000 1135899999999999999
Q ss_pred EEEEEecCCc-EEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCC-CCCCCCceEEEEEEeCCCCCeEEeeeccccc
Q psy14886 257 ECVVKSTVGK-ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTWFNVSEHVIGK 334 (505)
Q Consensus 257 ~C~~~n~~g~-~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~-~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~ 334 (505)
+|.|.|..|. .+....|.|..+|.+|..+.+.....+.+.|+|.++. .++.++..|.|+|+.. ...|......
T Consensus 239 ~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~-~~~~~~~~~~---- 313 (731)
T 2v5y_A 239 RCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTA-SGSWNDRQPV---- 313 (731)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEES-SSSCEEEEEC----
T ss_pred EEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEEC-CCCceEEecc----
Confidence 9999999998 6677889999999998888888889999999999876 3458899999999886 4567654321
Q ss_pred eeeeecCceeeEEeeeccCCceeEEEEEEE--cCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCc
Q psy14886 335 EVDRYTGRKEASIENVLVPWSTYEFKVIAG--NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 412 (505)
Q Consensus 335 ~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~--n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~ 412 (505)
....+.+.+ |.+++.|.|+|.|. |..|.+.+|... .+.+.+..|+.+|.++.+...+.++|.|.|+++..
T Consensus 314 ------~~~~~~i~~-L~p~t~Y~~~V~A~~~N~~G~s~~S~~~-~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~ 385 (731)
T 2v5y_A 314 ------DSTSYKIGH-LDPDTEYEISVLLTRPGEGGTGSPGPAL-RTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGY 385 (731)
T ss_dssp ------CSSEEEECS-CCTTCEEEEEEEEECSSTTCSCCBCCCE-EEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCH
T ss_pred ------CcceEEEeC-CCCCCEEEEEEEEEecCCCccccCCCcE-EeeecCCCCCCCCceeEEEeccCCeEEEEEECCCc
Confidence 223455555 99999999999999 999999888764 67888889999999999998899999999999655
Q ss_pred cccCCCCceEEEEEEEcCCCCcEEEEe-eecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeec
Q psy14886 413 EKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 413 ~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
...++.+.+|.|+|+..+...+..... ..........+.|.+|.|++.|.|+|.|+|..|.|+ |+.+.+.|.
T Consensus 386 ~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~ 458 (731)
T 2v5y_A 386 NVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTD 458 (731)
T ss_dssp HHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECC
T ss_pred ccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEcc
Confidence 556788999999999877444432211 112223456789999999999999999999999995 888888774
No 7
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=5.4e-33 Score=280.05 Aligned_cols=414 Identities=19% Similarity=0.237 Sum_probs=280.0
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEe--e
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS--S 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~--~ 78 (505)
+.+|+.++|.|.+.+.|.+.++|+|+|..+.. +..|.|.+++ .+|+|.|+|.+.|..|.... .
T Consensus 215 ~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~--------------~~~L~i~~~~-~~d~G~Y~C~a~n~~g~~~~s~~ 279 (642)
T 1e07_A 215 YRSGENLNLSCHAASNPPAQYSWFVNGTFQQS--------------TQELFIPNIT-VNNSGSYTCQAHNSDTGLNRTTV 279 (642)
T ss_pred cccCCEEEEEEEcCCCCCcEEEEEECCeEccc--------------CCceEEeccc-ccCCeEEEEEEEeCCCceEEeee
Confidence 46899999999999899999999999998752 4679999999 99999999999998876544 3
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe-eCCCEEEcCCCCCCCEEE
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~-~~~~l~i~~v~~~d~G~y 157 (505)
+.|.|...++...+.. .....+..|+.+.|.|.+.+.| +.+.|+++|..+....+..+. .++.|.|.++..+|+|.|
T Consensus 280 ~~v~v~~~~~~p~i~~-~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 357 (642)
T 1e07_A 280 TTITVYAEPPKPFITS-NNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPY 357 (642)
T ss_pred EEEEEEccCCCCEEEc-CCceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeE
Confidence 5566654332222222 2334466788899999999886 699999999988766666554 346799999999999999
Q ss_pred EEEEEcCCCcee-eeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCee
Q psy14886 158 SCTATNVHGMDE-SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236 (505)
Q Consensus 158 ~C~~~~~~g~~~-~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 236 (505)
+|.|.|..|... ..+.|.|...|......+....+..|+.+.|.|.+.+.|.+ .+.|+++|..+..
T Consensus 358 ~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~i~W~~~g~~~~~----------- 424 (642)
T 1e07_A 358 ECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPA--QYSWLIDGNIQQH----------- 424 (642)
T ss_pred EEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCC--eEEEEECCEEcCC-----------
Confidence 999999988754 34788888777655445566778899999999999988765 5679999987643
Q ss_pred eecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE--EEEEEcCCCCCCCc---eEEEEEeCCeEEEEeecCCCCCCCCce
Q psy14886 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTK--TTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITH 311 (505)
Q Consensus 237 ~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~--~~l~v~~~p~~p~~---~~~~~~~~~~v~l~w~~~~~~~~~i~~ 311 (505)
...|.|..+..+|.|.|+|.|.|..|....+ +.+.+..++.+|.. .......+..+.|.|... + +...
T Consensus 425 ---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~---~-~~~~ 497 (642)
T 1e07_A 425 ---TQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPE---A-QNTT 497 (642)
T ss_pred ---CceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECC---C-CCcE
Confidence 2469999999999999999999999875544 55666554433321 122334678899999854 1 2233
Q ss_pred EEEEEEeCCCCCeEEeeeccccceeeee-cCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCC
Q psy14886 312 YKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390 (505)
Q Consensus 312 y~v~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P 390 (505)
+.+... ...+........ .....+.+.+ +...+.+.|+|.|.|..|..........+...+..+...|
T Consensus 498 i~W~~~----------g~~l~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~ 566 (642)
T 1e07_A 498 YLWWVN----------GQSLPVSPRLQLSNGNRTLTLFN-VTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISP 566 (642)
T ss_pred EEEEEC----------CEeCCCCCcEEEcCCCcEEEEee-cChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecC
Confidence 333321 111110000011 1223455555 9999999999999999986532212112222222222334
Q ss_pred ceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecC
Q psy14886 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 470 (505)
Q Consensus 391 ~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~ 470 (505)
....+. ....+.|.+.. .+..+. .+.|...+.. +.. ...+.|.++.+...-.+++.|.|.
T Consensus 567 ~~~~v~--~g~~~~l~C~~----~g~p~p---~v~W~~~g~~------i~~-----~~~L~i~~~~~~d~G~Y~C~a~N~ 626 (642)
T 1e07_A 567 PDSSYL--SGANLNLSCHS----ASNPSP---QYSWRINGIP------QQH-----TQVLFIAKITPNNNGTYACFVSNL 626 (642)
T ss_pred CceeEE--cCCcEEEEEEe----ccCCCC---eEEEEECCEE------Ccc-----CceEEECcccccCCeEEEEEEEec
Confidence 444443 24567777764 111112 5666665511 111 124566666667777888999999
Q ss_pred CCCCCCCceEEE
Q psy14886 471 VGPGPESEVVTI 482 (505)
Q Consensus 471 ~G~g~~s~~~~~ 482 (505)
+|....+..+.+
T Consensus 627 ~G~~~~s~~l~V 638 (642)
T 1e07_A 627 ATGRNNSIVKSI 638 (642)
T ss_pred ccCcceeEEEEE
Confidence 998766554443
No 8
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=4.4e-32 Score=273.38 Aligned_cols=412 Identities=18% Similarity=0.274 Sum_probs=273.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEEcccCceE-e
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRY-S 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~-~ 77 (505)
+++|+.++|.|.+.+ |.+.+.|+|+|..+.. ..++.+ .+++|.|.+++ .+|+|.|+|.+.|..+... .
T Consensus 123 v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~-------~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~a~n~~~~~~s~ 193 (642)
T 1e07_A 123 VEDKDAVAFTCEPET-QDATYLWWVNNQSLPV-------SPRLQLSNGNRTLTLFNVT-RNDTASYKCETQNPVSARRSD 193 (642)
T ss_pred EecCCcEEEEEECCC-CCeeEEEEECCeECCC-------CCceEEcCCCCEEEEeCCC-cccCeeEEEEEecCCCCcccc
Confidence 357999999999988 8899999999998873 344443 45799999999 9999999999999877643 3
Q ss_pred eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEE
Q psy14886 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 78 ~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y 157 (505)
.+.|.|...++.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|+++|..+.. ...|.|.++..+|+|.|
T Consensus 194 ~~~l~V~~~p~~~~~~~--~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~--------~~~L~i~~~~~~d~G~Y 263 (642)
T 1e07_A 194 SVILNVLYGPDAPTISP--LNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQS--------TQELFIPNITVNNSGSY 263 (642)
T ss_pred eEEEEEEeCCCCcEEec--CCcccccCCEEEEEEEcCCCCCcEEEEEECCeEccc--------CCceEEecccccCCeEE
Confidence 57788885444443333 345688999999999999999999999999987743 45699999999999999
Q ss_pred EEEEEcCCCceeee--EEEEEEeCCe-eeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCC
Q psy14886 158 SCTATNVHGMDESK--GRLIVLHGPS-YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234 (505)
Q Consensus 158 ~C~~~~~~g~~~~~--~~l~v~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 234 (505)
+|.|.|..|..... +.|.|...+. ..........+..|+.+.|.|.+.+.+ + .+.|+++|..+.... ..
T Consensus 264 ~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~~p-~--~v~W~~~g~~l~~~~-----~~ 335 (642)
T 1e07_A 264 TCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQN-T--TYLWWVNNQSLPVSP-----RL 335 (642)
T ss_pred EEEEEeCCCceEEeeeEEEEEEccCCCCEEEcCCceeEecCCcEEEEEECCCCC-c--cEEEEECCccCCCcC-----CE
Confidence 99999988866543 4566654322 222223334455677899999998864 3 677999988775422 12
Q ss_pred eeeecCCeEEEecCCCCCCEEEEEEEEecCCcE-EEEEEEEEcCCCCCCCc--eEEEEEeCCeEEEEeecCCCCCCCCce
Q psy14886 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITH 311 (505)
Q Consensus 235 ~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~-~~~~~l~v~~~p~~p~~--~~~~~~~~~~v~l~w~~~~~~~~~i~~ 311 (505)
.....+..|.|..+..+|.|.|+|.|.|..|.. +..+.|.|..+|..+.. .......+..+.|.|... +.|...
T Consensus 336 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~---g~p~~~ 412 (642)
T 1e07_A 336 QLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAA---SNPPAQ 412 (642)
T ss_pred EEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcC---ccCCCe
Confidence 223346789999999999999999999999874 45678888766654321 122334677888998742 223233
Q ss_pred EEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCc
Q psy14886 312 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 391 (505)
Q Consensus 312 y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~ 391 (505)
+. |......+. ....+.+.+ +.+.+.+.|+|.|.|..|....+... .+... .++.+|.
T Consensus 413 i~----------W~~~g~~~~--------~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~s~~~-~v~v~--~~~~~p~ 470 (642)
T 1e07_A 413 YS----------WLIDGNIQQ--------HTQELFISN-ITEKNSGLYTCQANNSASGHSRTTVK-TITVS--AELPKPS 470 (642)
T ss_pred EE----------EEECCEEcC--------CCceEEEcc-CChhhCeEEEEEEEcCCCCCcccceE-EEEEe--ccCCCce
Confidence 33 333222221 223445555 99999999999999999876544321 11111 1111221
Q ss_pred ee---eeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCC--cEEEEeeecCceeeEEEEcCCccceeeEEEEEE
Q psy14886 392 RI---GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE--FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466 (505)
Q Consensus 392 ~~---~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~ 466 (505)
.. .........+.|.+... ++ .-.+.|...+..- -....... ....+.|.++.+.....+++.
T Consensus 471 i~~~~~~~v~~g~~v~l~C~~~------~~--~~~i~W~~~g~~l~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~ 538 (642)
T 1e07_A 471 ISSNNSKPVEDKDAVAFTCEPE------AQ--NTTYLWWVNGQSLPVSPRLQLSN----GNRTLTLFNVTRNDARAYVCG 538 (642)
T ss_pred EecCCceeecCCCeEEEEEECC------CC--CcEEEEEECCEeCCCCCcEEEcC----CCcEEEEeecChhcCceEEEE
Confidence 10 01112356788888762 11 2345565554110 00011111 113556666666666677888
Q ss_pred EecCCCCCCC
Q psy14886 467 AINDVGPGPE 476 (505)
Q Consensus 467 a~n~~G~g~~ 476 (505)
|.|..|....
T Consensus 539 a~n~~g~~~s 548 (642)
T 1e07_A 539 IQNSVSANRS 548 (642)
T ss_pred eEcCCCCccC
Confidence 9999997543
No 9
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=5.1e-34 Score=268.49 Aligned_cols=338 Identities=23% Similarity=0.359 Sum_probs=233.5
Q ss_pred CCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcC-CCCCCCeEEEEEEEcccCceEe-eE
Q psy14886 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL-NPERDPAMYQCRAKNQLKTRYS-SA 79 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~-~~~~d~G~Y~C~~~~~~~~~~~-~~ 79 (505)
.+|+.+.|.|.+.|.|.+.|+|+|||.++... ...++...+++|.|.++ + .+|+|.|+|.|.|..|...+ .+
T Consensus 21 ~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~-----~~~~~~~~~g~l~i~~~~~-~~D~G~Y~C~A~N~~G~~~s~~~ 94 (384)
T 3kld_A 21 SEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIG-----MDFRYSVVDGSLLINNPNK-TQDAGTYQCIATNSFGTIVSREA 94 (384)
T ss_dssp CSCSEEEECCEEEEESCCEEEEEETTEECCC---------CEEEETTEEEEESCCH-HHHCEEEEEEEEETTEEEECCCE
T ss_pred CCCCeEEEEeEecCCCCCEEEEEECCEECcCC-----CCccEEEECCEEEEcCCCC-cccCEEEEEEEEcCcccEEecce
Confidence 47999999999999999999999999998742 23466777889999887 6 88999999999999887544 56
Q ss_pred EEEEEecCCCccCCCCCceEEeeCCCeEEEEeecC-CCCCCeEEEEECCEEecCCCcEEE-eeCCCEEEcCCCCCCCEEE
Q psy14886 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~y 157 (505)
.+.+... +.+...+ .....+.+|+.+.|.|.+. +.|.+.+.|++++..+....+... ..++.|.|.++..+|+|.|
T Consensus 95 ~l~v~~~-~~~~~~~-~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 172 (384)
T 3kld_A 95 KLQFAYL-ENFKTRT-RSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNY 172 (384)
T ss_dssp EEEEEEE-CCCSCCC-CCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEE
T ss_pred EEEEecc-cccccCC-CCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceE
Confidence 6666643 3333332 2446788999999999764 346679999999988765554443 3456899999999999999
Q ss_pred EEEEEcCCCceeee---EEEEEE-------eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeC-CEEecCC
Q psy14886 158 SCTATNVHGMDESK---GRLIVL-------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN-GVRIGNM 226 (505)
Q Consensus 158 ~C~~~~~~g~~~~~---~~l~v~-------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~-~~~~~~~ 226 (505)
+|.|.|..+..... ..+.+. ..|.+....+....+..|+.+.|.|.+.+.|.| .+.|+++ +..+...
T Consensus 173 ~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p--~i~W~k~~~~~~~~~ 250 (384)
T 3kld_A 173 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVP--TILWRRADGKPIARK 250 (384)
T ss_dssp EEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCC--EEEEEETTCCCCCTT
T ss_pred EEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCC--cEEEEeCCCcccccc
Confidence 99999988754321 223222 133343444556678899999999999999876 4569884 4333221
Q ss_pred CCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCce-EEEEEeCCeEEEEeecCCCC
Q psy14886 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV-QVVEVHKTSATIQWTDGATN 305 (505)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~-~~~~~~~~~v~l~w~~~~~~ 305 (505)
......+..|.|.++..+|.|.|+|.|.|..|.......|.|..+|.....+ ......+..+.|.|..
T Consensus 251 -------~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~---- 319 (384)
T 3kld_A 251 -------ARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKA---- 319 (384)
T ss_dssp -------CEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEE----
T ss_pred -------ceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeEC----
Confidence 2223345689999999999999999999999998888888887655321111 1223345566677653
Q ss_pred CCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 306 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 306 ~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
...+.....|......+........ ....+.+.. +...+.+.|+|.|.|.+|...
T Consensus 320 ---------~g~P~p~i~W~k~g~~l~~~~~~~~-~~~~L~i~~-v~~~D~G~Y~C~A~N~~G~~~ 374 (384)
T 3kld_A 320 ---------NGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITI-VNLSDAGMYQCVAENKHGVIF 374 (384)
T ss_dssp ---------EEESCCEEEEEETTEECCCBTTEEE-ETTEEEESS-CCGGGCEEEEEEEEETTEEEE
T ss_pred ---------CccCCCeEEEEECCEECCCCccEEE-eCCEEEEee-cChhhCEEEEEEEEeCCceEE
Confidence 2222222233332222211111111 122445555 889999999999999999764
No 10
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.1e-33 Score=292.91 Aligned_cols=441 Identities=19% Similarity=0.220 Sum_probs=291.7
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|+.++|.|.+.|.|.+.+.|+|++....... ......++...+++|.|.+++ .+|+|.|+|.+.|..|.....+.
T Consensus 260 v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~-~~~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~a~n~~g~~~~~~~ 337 (816)
T 3dmk_A 260 YSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQ-AVVLNDRVKQVSGTLIIKDAV-VEDSGKYLCVVNNSVGGESVETV 337 (816)
T ss_dssp ECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEE-ECCCSSSEEEETTEEEECSCC-GGGCEEEEEEEECSSCEEEEEEE
T ss_pred EeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCc-ceecCCceEeccceEEECCCC-HhHCEEEEEEEEcCCCceEEEEE
Confidence 3689999999999999999999999543221100 011334666678899999999 99999999999999888777788
Q ss_pred EEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEE
Q psy14886 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 160 (505)
Q Consensus 81 l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~ 160 (505)
|.|.. ++.+...+ ....+.+|+++.|.|.+.+.|.+.+.|+++|..+... ++.|.|.++..+|+|.|+|.
T Consensus 338 l~V~~-~~~~~~~~--~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~-------~~~L~i~~v~~~d~G~Y~C~ 407 (816)
T 3dmk_A 338 LTVTA-PLSAKIDP--PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-------ESVLRIESVKKEDKGMYQCF 407 (816)
T ss_dssp EEECE-EEEEEEES--SEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEE
T ss_pred EEEcC-CCceeeCC--CceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCC-------CCEEEEcCCCHHHCEEEEEE
Confidence 88875 44444433 4567899999999999999999999999999988643 35699999999999999999
Q ss_pred EEcCCCceeeeEEEEEEe--CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeee
Q psy14886 161 ATNVHGMDESKGRLIVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238 (505)
Q Consensus 161 ~~~~~g~~~~~~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 238 (505)
+.|..|.....+.+.|.. .|+.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+......... .....
T Consensus 408 a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p--~v~W~~~g~~l~~~~~~~~~-~~~~~ 484 (816)
T 3dmk_A 408 VRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTP--EISWELDGKKIANNDRYQVG-QYVTV 484 (816)
T ss_dssp EECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCC--EEEEEETTEECCSCTTEEEE-EEECT
T ss_pred EECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCC--EEEEEECCEECCCCCCcccc-cEEec
Confidence 999999887777777742 34444444556678899999999999987765 66799999888653211000 00001
Q ss_pred c---CCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEE
Q psy14886 239 D---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII 315 (505)
Q Consensus 239 ~---~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~ 315 (505)
. ...|.|..+..+|.|.|+|.|.|..|.....+.|.|..+|............+..+.|.|... +.+...+.+.
T Consensus 485 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~---g~p~~~i~W~ 561 (816)
T 3dmk_A 485 NGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVA---GYPIDSIVWE 561 (816)
T ss_dssp TSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEE---CSSEEEEEEE
T ss_pred CCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEec---CCCCCEEEEE
Confidence 1 135999999999999999999999999999999999887743332333455778899999742 2333333322
Q ss_pred EEeCCCCCeEEeeeccccceeeeecCceeeEEeeecc-CCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceee
Q psy14886 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV-PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 394 (505)
Q Consensus 316 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~ 394 (505)
.....+.............+.+.+ +. ..+.+.|+|.|.|..|.+........+...+...+..+....
T Consensus 562 ----------k~~~~l~~~~~~~~~~~~~l~i~~-v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~ 630 (816)
T 3dmk_A 562 ----------RDNRALPINRKQKVFPNGTLIIEN-VERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGP 630 (816)
T ss_dssp ----------ETTEESCCSTTEEECTTSEEEESS-CCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSC
T ss_pred ----------ECCeEcccCCceEEecCCeEEEEe-cCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccc
Confidence 221111111111111233445554 65 578999999999998864321111111111211111112222
Q ss_pred eeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC-----CcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEec
Q psy14886 395 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-----EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 469 (505)
Q Consensus 395 ~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n 469 (505)
+ .....+.|.+... ++.+ ...+.|...+.. .+.... . ......+.|.++.+.....++..|.|
T Consensus 631 ~--~~G~~v~L~C~~~----~~~~--~~~i~W~~~g~~l~~~~~~~~~~--~--~~~~~~L~i~~v~~~d~G~Y~C~a~N 698 (816)
T 3dmk_A 631 A--QVGQYLTLHCSVP----GGDL--PLNIDWTLDGQAISEDLGITTSR--V--GRRGSVLTIEAVEASHAGNFTCHARN 698 (816)
T ss_dssp E--ESSCEEEEEEBCC----CSSS--CCEEEEEETTBCCCGGGTCEEEE--E--TTTEEEEEEESCCGGGCEEEEEEEEC
T ss_pred c--CCCCeEEEEEEEe----CCCC--CCEEEEEECCeEcCCCCCeeEEE--c--CCCeeEEEEccCChhhCEEEEEEEEe
Confidence 2 2356788888651 1111 124566665511 111111 1 11234677888888888999999999
Q ss_pred CCCCCCCCceEEE
Q psy14886 470 DVGPGPESEVVTI 482 (505)
Q Consensus 470 ~~G~g~~s~~~~~ 482 (505)
.+|....+..+.+
T Consensus 699 ~~g~~~~~~~l~V 711 (816)
T 3dmk_A 699 LAGHQQFTTPLNV 711 (816)
T ss_dssp SSCEEEEEEEECE
T ss_pred CCccEEEEEEEEE
Confidence 9998755544433
No 11
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=2.5e-33 Score=252.94 Aligned_cols=258 Identities=22% Similarity=0.364 Sum_probs=209.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE--E--CCeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--Q--DNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~--~--~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
+.+|++++|.|.+.+.|.+.++|+|++..+.. ..++.+ . ..+|.|.+++ .+|+|.|+|.+.|..+...
T Consensus 17 ~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~-------~~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~~~n~~g~~~ 88 (284)
T 2rik_A 17 LALGESGTFKCHVTGTAPIKITWAKDNREIRP-------GGNYKMTLVENTATLTVLKVT-KGDAGQYTCYASNVAGKDS 88 (284)
T ss_dssp EETTCCEEEEEEEESSSCCEEEEEETTEECCS-------SSSEEEEEETTEEEEEESSCC-GGGCEEEEEEEEETTEEEE
T ss_pred ecCCCcEEEEEEEEcCCCCEEEEEECCEECcC-------CCcEEEEEcCCEEEEEEecCC-cccCEEEEEEEEECCceEE
Confidence 35899999999999988899999999999873 233333 2 3689999999 9999999999999888877
Q ss_pred eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEee---CCCEEEcCCCCCC
Q psy14886 77 SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRDD 153 (505)
Q Consensus 77 ~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~---~~~l~i~~v~~~d 153 (505)
..+.|.|.. +|.+.... .....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..... ...|.|.++..+|
T Consensus 89 ~~~~l~V~~-~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 166 (284)
T 2rik_A 89 CSAQLGVQE-PPRFIKKL-EPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVED 166 (284)
T ss_dssp EEEEEEEEC-CCEEEECC-CSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGG
T ss_pred EEEEEEccC-CCcccccC-CCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCccc
Confidence 788888885 56554433 344568899999999999999999999999999987665554432 2359999999999
Q ss_pred CEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccC
Q psy14886 154 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233 (505)
Q Consensus 154 ~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 233 (505)
+|.|+|.+.|..|.....+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|++++..+.....
T Consensus 167 ~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~~----- 238 (284)
T 2rik_A 167 SGDYTCEAHNAAGSASSSTSLKVKEPPVFRK-KPHPVETLKGADVHLECELQGTPPF--QVSWHKDKRELRSGKK----- 238 (284)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCBCCS-CCCCEEECTTCCEEEEEECBSSSCC--EEEEEETTEEECBTTT-----
T ss_pred CEEEEEEEEcCCCceeEEEEEEEecCCccee-CCCcceecCCCeEEEEEEEEecCCC--EEEEEECCEECcCCCC-----
Confidence 9999999999999988889999987776543 3455678899999999999987764 6779999998865321
Q ss_pred Ceeeec--CCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 234 PNINID--GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 234 ~~~~~~--~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
...... ...|.|..+..+|.|.|+|.|.|..|.....+.|.|+
T Consensus 239 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 239 YKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 111111 2478899999999999999999999999988888875
No 12
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=7.7e-33 Score=262.97 Aligned_cols=341 Identities=21% Similarity=0.315 Sum_probs=241.3
Q ss_pred CCCCCceEEEEEEec-cCCCeEEEEECCEECcCCCCCCCCCCcEEE-ECCeEEEEcC-----CCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFG-VPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYL-----NPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~-~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~-----~~~~d~G~Y~C~~~~~~~ 73 (505)
|.+|+.++|.|.+.+ .|.+.+.|+|+|..+... ...++.. .+++|.|.++ + .+|+|.|+|.+.+..+
T Consensus 33 v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~-----~~~~~~~~~~~~l~i~~~~~~~~~-~~D~G~Y~C~~~~~~~ 106 (403)
T 3laf_A 33 TMRGGNVLLNCSAESDRGVPVIKWKKDGLILALG-----MDDRKQQLPNGSLLIQNILHSRHH-KPDEGLYQCEASLGDS 106 (403)
T ss_dssp ECTTCCEEECCEEECTTCCCEEEEEETTEECCTT-----SCTTEEECTTSCEEECSCCCBTTB-CSSCEEEEEEEECGGG
T ss_pred EecCCcEEEEEEcCCCCCCceEEEEECCEECccC-----CcccEEEecCCcEEEeeeeccCCC-CCcceEEEEEEEeCCC
Confidence 468999999999986 578899999999998643 2334443 5678888887 6 7799999999986543
Q ss_pred ceE--eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEec---CCCcEEEeeCCCEEEcC
Q psy14886 74 TRY--SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG---SGGRRKIFENGNLLISP 148 (505)
Q Consensus 74 ~~~--~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~---~~~~~~~~~~~~l~i~~ 148 (505)
... ..+.+.|.. +|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+. ...+.....++.|.|.+
T Consensus 107 ~~~~s~~~~l~v~~-p~~~~~~~--~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 183 (403)
T 3laf_A 107 GSIISRTAKVMVAG-PLRFLSQT--ESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISR 183 (403)
T ss_dssp CEEECCCEEEEECC-CCEECSCC--CCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECS
T ss_pred ccEEEEEEEEEecC-CCccccCC--CcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcc
Confidence 332 245566654 55554443 45678999999999999999999999999998774 34455556677899999
Q ss_pred CCCCCCEEEEEEEEcCCCcee-eeEEEEEEeCCee-----eeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEE
Q psy14886 149 VSRDDSGIYSCTATNVHGMDE-SKGRLIVLHGPSY-----YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222 (505)
Q Consensus 149 v~~~d~G~y~C~~~~~~g~~~-~~~~l~v~~~p~~-----~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~ 222 (505)
+..+|+|.|+|.+.|..+... ..+.+.|...|.. ....+....+..|+.+.|.|.+.+.|.+ .+.|++++..
T Consensus 184 ~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~ 261 (403)
T 3laf_A 184 LQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPP--SFTWLRGEEV 261 (403)
T ss_dssp CCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCC--EEEEEETTEE
T ss_pred cccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCC--eEEEEECCee
Confidence 999999999999999877644 3477777665532 2234556678899999999999998766 6779999988
Q ss_pred ecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCc-eEEEEEeCCeEEEEeec
Q psy14886 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG-VQVVEVHKTSATIQWTD 301 (505)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~-~~~~~~~~~~v~l~w~~ 301 (505)
+.... .......+..|.|..+..+|.|.|+|.|.|..|..+..+.|.|..+|..... .......+..+.|.|..
T Consensus 262 ~~~~~-----~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~ 336 (403)
T 3laf_A 262 IQLRS-----KKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAV 336 (403)
T ss_dssp CCCSS-----SSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEE
T ss_pred ccCCC-----ceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEE
Confidence 76432 1223345678999999999999999999999999888888888765532110 01122345567777653
Q ss_pred CCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 302 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 302 ~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
...+.....|......+.............+.+.. +...+.+.|+|.|.|..|...
T Consensus 337 -------------~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 392 (403)
T 3laf_A 337 -------------SGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILG-VVKSDEGFYQCVAENEAGNAQ 392 (403)
T ss_dssp -------------EEESCCEEEEEETTEECCCSSSEEEETTTEEEESS-CCGGGCEEEEEEEEETTEEEE
T ss_pred -------------eeccCCEEEEEECCEECCCCCcEEEecCccEEEec-cccccCEEEEEEEEcCCceEE
Confidence 22222222333332222111111112333455555 889999999999999999864
No 13
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=1.2e-30 Score=260.24 Aligned_cols=464 Identities=16% Similarity=0.149 Sum_probs=281.5
Q ss_pred CCCCCceEEEEEEeccCC---CeEEEEECCEECc-----CC--CCCCCCCCcEEEEC------CeEEEEcCCCCCCCeEE
Q psy14886 1 MDNQADLTWTCEAFGVPD---VTYSWFRNGELLN-----SE--TLPLEDQDRYFIQD------NVLTIRYLNPERDPAMY 64 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~---~~~~W~~~~~~l~-----~~--~~~~~~~~~~~~~~------~~L~i~~~~~~~d~G~Y 64 (505)
+.+|++++|.|.+.+.|. ..+.|+|++..+. .. .......+|+.+.. .+|.|.+++ .+|+|.|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~-~~D~G~Y 90 (585)
T 2ocw_A 12 SVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLS-QDDSGRY 90 (585)
T ss_pred EecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCC-cccCEEE
Confidence 468999999999988653 4899999976331 10 00011234555532 369999999 9999999
Q ss_pred EEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCC-CCeEEEEECCEEec----C-------
Q psy14886 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIG----S------- 132 (505)
Q Consensus 65 ~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~i~W~~~g~~~~----~------- 132 (505)
+|.+.|..+.....+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.+ .+.+.|++++.... .
T Consensus 91 ~C~~~n~~~~~~~~~~l~V~~-~p~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~ 167 (585)
T 2ocw_A 91 KCGLGINSRGLSFDVSLEVSQ-GPGLLNDT--KVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNP 167 (585)
T ss_pred EEEcccCCCCceEEEEEEEec-CccccCCC--ccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCc
Confidence 999998887777788888885 66665543 556789999999999998654 56899999875321 1
Q ss_pred --CCcEEEeeCC------CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEe
Q psy14886 133 --GGRRKIFENG------NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 204 (505)
Q Consensus 133 --~~~~~~~~~~------~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 204 (505)
..+..+..++ +|.|.++..+|+|.|+|.|.|..|.....+.|.|..++ +..+.+..|+.+.|.|.+
T Consensus 168 ~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~------p~~~~~~~G~~v~l~C~~ 241 (585)
T 2ocw_A 168 NYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE------PELVYEDLRGSVTFHCAL 241 (585)
T ss_pred cccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC------CceeEEcCCCcEEEEEEc
Confidence 2344444333 59999999999999999999999988888888886644 234457789999999997
Q ss_pred eecCCCC-eEEEEE-eCCEE---ecCCCCC--cccCCeeeec----CC--eEEEecCCCCCCEEEEEEEEecCCcEE---
Q psy14886 205 HTEELLD-VAYIWT-HNGVR---IGNMDLN--ELETPNINID----GG--LLEITNASFADAGEYECVVKSTVGKIS--- 268 (505)
Q Consensus 205 ~~~~~~~-~~~~w~-~~~~~---~~~~~~~--~~~~~~~~~~----~~--~l~i~~~~~~~~g~y~C~~~n~~g~~~--- 268 (505)
+.+.+. +.|.|. +++.. +...... .......... .+ .|.|..+..+|.|.|+|.|.|. |...
T Consensus 242 -~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~ 319 (585)
T 2ocw_A 242 -GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGS 319 (585)
T ss_pred -CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccC
Confidence 444433 788997 77731 1110000 0000111111 23 7999999999999999999995 4433
Q ss_pred --EEEEEEEcCCCCCCCce-EEEEEeCCeEEEEeecCCCCCCCCceEEEEEEe--CCCCCeEEeeec-c---ccceeee-
Q psy14886 269 --TKTTVIVEGPPGLPGGV-QVVEVHKTSATIQWTDGATNGRPITHYKIIART--NWNSTWFNVSEH-V---IGKEVDR- 338 (505)
Q Consensus 269 --~~~~l~v~~~p~~p~~~-~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~--~~~~~w~~~~~~-~---~~~~~~~- 338 (505)
..+.|.|..+|..+..+ .+....+..+.|.|.... ...+...|.+.+.. .+.......... . .......
T Consensus 320 ~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~-~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~ 398 (585)
T 2ocw_A 320 PIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNR-KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLL 398 (585)
T ss_pred ceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCC-CCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEe
Confidence 77888888776544322 234457788999998532 12222334333322 211000000000 0 0000000
Q ss_pred ---ecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCC-CCCCceeeeeccccccEEEEEEeCCccc
Q psy14886 339 ---YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP-YQAPSRIGGGGGKIGDLSISWEPLPREK 414 (505)
Q Consensus 339 ---~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p-~~~P~~~~~~~~~~~~v~l~W~~~~~~~ 414 (505)
..+...+.+.+ +...+.+.|+|.| |..|....+.. +......| ...|..+.+. ....+.|.|... ...
T Consensus 399 ~~~~~g~~~L~I~~-v~~~D~G~Y~C~a-n~~g~~~~~~~---l~V~~~~p~~~~~~~~~v~--~G~~v~L~C~~~-~~~ 470 (585)
T 2ocw_A 399 EEPGNGTFTVILNQ-LTSRDAGFYWCLT-NGDTLWRTTVE---IKIIEGEPNLKVPGNVTAV--LGETLKVPCHFP-CKF 470 (585)
T ss_pred ccCCCcEEEEEECC-CChhhCEEEEEcc-cCCCccceeEE---EEEecCccccccCCceeEe--cCCcEEEEEEec-CCC
Confidence 00112244444 8999999999999 98876533222 11111111 1123444443 346788888761 111
Q ss_pred cCCCCceEEEEEEEcCCCCcEE-------EEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 415 QNAPNIYYKIFWRKKNDTEFQS-------ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 415 ~~~~i~~Y~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
.+ .-.+.|.|...+...... .......+.....+.|.++...-.=.++..|.|.+|.+....+......|+
T Consensus 471 ~~--~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 471 SS--YEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CC--CccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 11 234677777766211000 001111122234677777776666667788999999876553444444333
No 14
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.9e-32 Score=258.19 Aligned_cols=336 Identities=24% Similarity=0.330 Sum_probs=236.4
Q ss_pred CCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCC-CCCeEEEEEEEcccCceEe-eE
Q psy14886 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPE-RDPAMYQCRAKNQLKTRYS-SA 79 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~-~d~G~Y~C~~~~~~~~~~~-~~ 79 (505)
.+|+.++|.|.+.|.|.+.+.|+|+|..+... ...++...+++|.|.++. . +|+|.|+|.+.|..|...+ .+
T Consensus 20 ~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~-----~~~~~~~~~~~L~i~~~~-~~~D~G~Y~C~a~n~~g~~~s~~~ 93 (382)
T 1cs6_A 20 SAEEKVTLTCRARANPPATYRWKMNGTELKMG-----PDSRYRLVAGDLVISNPV-KAKDAGSYQCVATNARGTVVSREA 93 (382)
T ss_dssp CSCCEEEECCEEEEESCCEEEEEETTEECCCS-----TTSSEEEETTEEEEESCC-HHHHCEEEEEEEEETTEEEECCCE
T ss_pred CCCCcEEEEEEecCCCCCEEEEEECCEECCcC-----CCccEEeeCCeEEEeccc-ccccCEEEEEEEEcCCcEEEecce
Confidence 58999999999999999999999999998743 346778888999999998 7 9999999999998876544 57
Q ss_pred EEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEec--CCCcEEEe-eCCCEEEcCCCCCCCE
Q psy14886 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIG--SGGRRKIF-ENGNLLISPVSRDDSG 155 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~--~~~~~~~~-~~~~l~i~~v~~~d~G 155 (505)
.|.|... +.+.... .....+.+|+.+.|.|.+ .+.|.+.+.|++++..+. .+.+.... ..+.|.|.++..+|+|
T Consensus 94 ~l~v~~~-~~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 171 (382)
T 1cs6_A 94 SLRFGFL-QEFSAEE-RDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLG 171 (382)
T ss_dssp EEEEEEE-CCCCSSC-CCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCE
T ss_pred EEEeecc-ccccccC-CCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCe
Confidence 7777753 4333332 345678999999999996 455788999999987642 33333333 3468999999999999
Q ss_pred EEEEEEEcCCCceeee-----EEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEec
Q psy14886 156 IYSCTATNVHGMDESK-----GRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224 (505)
Q Consensus 156 ~y~C~~~~~~g~~~~~-----~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~ 224 (505)
.|+|.+.+..|..... +.+.+.. +|.+....+....+..|+.+.|.|.+.+.|.+ .+.|++++..+.
T Consensus 172 ~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~--~i~W~~~~~~~~ 249 (382)
T 1cs6_A 172 NYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVP--QIKWRKLDGSQT 249 (382)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCC--EEEEEECCSCCS
T ss_pred eEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCC--EEEEEECCcccc
Confidence 9999999887543322 3444432 34343334556778899999999999998765 567998776543
Q ss_pred CCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCc-eEEEEEeCCeEEEEeecCC
Q psy14886 225 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG-VQVVEVHKTSATIQWTDGA 303 (505)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~-~~~~~~~~~~v~l~w~~~~ 303 (505)
. ........|.|..+..+|.|.|+|.|.|..|.....+.|.|..+|..... .......+..+.|.|...
T Consensus 250 ~---------~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~- 319 (382)
T 1cs6_A 250 S---------KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVAS- 319 (382)
T ss_dssp C---------CCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEE-
T ss_pred c---------EEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEee-
Confidence 2 11234568999999999999999999999999888888888765532111 112234566777777631
Q ss_pred CCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 304 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 304 ~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
+.|...+. |......+........ ....+.+.+ +...+.+.|+|.|.|..|...
T Consensus 320 --g~p~p~v~----------W~~~g~~~~~~~~~~~-~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 373 (382)
T 1cs6_A 320 --GKPRPAVR----------WLRDGQPLASQNRIEV-SGGELRFSK-LVLEDSGMYQCVAENKHGTVY 373 (382)
T ss_dssp --EESCCEEE----------EEETTEECCCCSSEEE-ETTEEEESS-CCGGGCEEEEEEEEETTEEEE
T ss_pred --eecCCEEE----------EEECCEECCCCceEEE-ECCEEEECc-CCcccCEEEEEEEEeCCCeEE
Confidence 22222222 3332222211100011 122445554 999999999999999999764
No 15
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=5.5e-33 Score=262.52 Aligned_cols=338 Identities=18% Similarity=0.268 Sum_probs=233.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEE-CCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCC------CeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERD------PAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~-~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d------~G~Y~C~~~~~~~ 73 (505)
+.+|+.++|.|.+.|.|.+.|+|+| ||..+... ...+....+++|.|.+++ .+| +|.|+|.|.|..|
T Consensus 16 ~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~-----~~~~~~~~~~~L~i~~~~-~~d~~~~~d~G~Y~C~a~n~~g 89 (388)
T 2v5m_A 16 FSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDV-----PGLRQISSDGKLVFPPFR-AEDYRQEVHAQVYACLARNQFG 89 (388)
T ss_dssp EETTTCEEEECEEEEESCCEEEEEETTSCBCCCB-----TTTBEECSTTEEEECCCC-GGGCCHHHHEEEEEEEEEETTE
T ss_pred EEcCccEEEEEECCCCCCCEEEEEcCCCCccccC-----CCceEEcCCceEEecccC-hhhccccccCceEEEEEEccCC
Confidence 3589999999999999999999999 78777632 122333467899999999 887 9999999999887
Q ss_pred ceE-eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCC---CeEEEEECCEEecC-----CCcEEEeeCCCE
Q psy14886 74 TRY-SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK---PKFVWKKDGNIIGS-----GGRRKIFENGNL 144 (505)
Q Consensus 74 ~~~-~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~---~~i~W~~~g~~~~~-----~~~~~~~~~~~l 144 (505)
... ..+.|.+.. +|.+...+ ....+.+|+.+.|.|.+.+.+. +.+.|++++..+.. ..+.....++.|
T Consensus 90 ~~~s~~~~v~v~~-~p~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L 166 (388)
T 2v5m_A 90 SIISRDVHVRAVV-AQYYEADV--NKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGEL 166 (388)
T ss_dssp EEECCCEEEEEEC-CCCCCCBC--CCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCE
T ss_pred eEEecceEEEEcc-ccccccCc--cceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcE
Confidence 643 356677764 55555443 3467899999999999988653 69999998876532 346666677899
Q ss_pred EEcCCCCCCC-EEEEEEEEcCCCceee-e---EEEEEEeC-----CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEE
Q psy14886 145 LISPVSRDDS-GIYSCTATNVHGMDES-K---GRLIVLHG-----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214 (505)
Q Consensus 145 ~i~~v~~~d~-G~y~C~~~~~~g~~~~-~---~~l~v~~~-----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~ 214 (505)
.|.+++.+|. |.|+|.+.+..+.... . ..+.|..+ |...........+..|+.+.|.|.+.+.|.+ .+
T Consensus 167 ~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v 244 (388)
T 2v5m_A 167 HIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAP--SF 244 (388)
T ss_dssp EESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCC--EE
T ss_pred EEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCC--EE
Confidence 9999999999 9999999987643322 1 35566543 2111112234567889999999999998766 46
Q ss_pred EEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCc-eEEEEEeCC
Q psy14886 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG-VQVVEVHKT 293 (505)
Q Consensus 215 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~-~~~~~~~~~ 293 (505)
.|++++......... ............|.|..+..+|.|.|+|.|.|..|..+..+.|.|..+|..... .......+.
T Consensus 245 ~W~~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~ 323 (388)
T 2v5m_A 245 RWYKFIEGTTRKQAV-VLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGR 323 (388)
T ss_dssp EEEEECTTSSCEEEC-CCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTS
T ss_pred EEEecCCCCcccccc-cccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCC
Confidence 698864322110000 001223344678999999999999999999999999888888888765532110 112233455
Q ss_pred eEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 294 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 294 ~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
.+.|.|.. ...+.....|......+. .+...+.+.. +...+.+.|+|.|.|..|...
T Consensus 324 ~~~l~C~~-------------~g~p~p~i~W~~~g~~i~-------~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 380 (388)
T 2v5m_A 324 PAVFTCQY-------------TGNPIKTVSWMKDGKAIG-------HSESVLRIES-VKKEDKGMYQCFVRNDRESAE 380 (388)
T ss_dssp CEEEEEEE-------------EEECCCEEEEEETTEECS-------CCSSEEEESS-CCGGGCEEEEEEEECSSCEEE
T ss_pred CEEEEEEe-------------ccccCCeEEEEECCEECc-------cCCCEEEEec-CChhhCEEEEEEEEcCCCcEE
Confidence 66677653 222222334544333222 1223444554 999999999999999999764
No 16
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=249.32 Aligned_cols=281 Identities=25% Similarity=0.345 Sum_probs=221.7
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC-CcEEEe--eCC--CEEEcCCCCCCCEEEEEEE
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIF--ENG--NLLISPVSRDDSGIYSCTA 161 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~-~~~~~~--~~~--~l~i~~v~~~d~G~y~C~~ 161 (505)
+|.|...+ ....+.+|+++.|.|.+.+.|.+.+.|+++|..+... .++.+. .++ .|.|.+++.+|+|.|+|.|
T Consensus 4 ~P~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 4 APHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCEEEECC--CCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred CCeeeecc--cceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 56665554 4577999999999999999999999999999988653 334332 233 6999999999999999999
Q ss_pred EcCCCceeeeEEEEEEeCCeeeee----CCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeee
Q psy14886 162 TNVHGMDESKGRLIVLHGPSYYEQ----LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237 (505)
Q Consensus 162 ~~~~g~~~~~~~l~v~~~p~~~~~----~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 237 (505)
.|..|.....+.|.|..+|.+... .+....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~-----~~~~ 154 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGH-----YQVI 154 (305)
T ss_dssp EETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCC--EEEEEESSSBCCSSSS-----CEEE
T ss_pred EcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCC--EEEEEECCEECCCCCc-----EEEE
Confidence 999998888888888765544221 1235667889999999999998766 6679998877654321 1111
Q ss_pred --ecCCeEEEec-CCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCC-CCCCCCceEE
Q psy14886 238 --IDGGLLEITN-ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYK 313 (505)
Q Consensus 238 --~~~~~l~i~~-~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~-~~~~~i~~y~ 313 (505)
.....|.|.. +...|.|.|+|.|.|..|.....+.|.+..+|.+|..+.+.......+.|+|.++. +++.++..|.
T Consensus 155 ~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~ 234 (305)
T 2nzi_A 155 VTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYI 234 (305)
T ss_dssp ECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEE
T ss_pred EcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEE
Confidence 1235788888 99999999999999999999999999999999999999888889999999999875 4566889999
Q ss_pred EEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCC
Q psy14886 314 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 387 (505)
Q Consensus 314 v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~ 387 (505)
++++......|....... ...+.+.+ |.+++.|.|+|.|.|..|.+.+|..+..+.+.+..|.
T Consensus 235 v~~~~~~~~~w~~~~~~~----------~~~~~i~~-l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~~~p~ 297 (305)
T 2nzi_A 235 VEKCATTAERWLRVGQAR----------ETRYTVIN-LFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKTR 297 (305)
T ss_dssp EEEEETTSCCEEEEEEES----------SSEEEECS-CCSSCEEEEEEEEEETTEECCCCCCCCCEECCC----
T ss_pred EEEecCCCCccEECcccc----------CceEEecC-CCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCCcccc
Confidence 999999889998865432 23445555 9999999999999999999999988766666555443
No 17
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=2.5e-32 Score=282.84 Aligned_cols=438 Identities=21% Similarity=0.286 Sum_probs=286.7
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
+.+|++++|.|.+.+.|.+.+.|+|+|..+... .+.|.|.+++ .+|+|.|+|.+.|..+.....+.
T Consensus 355 v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~-------------~~~L~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~ 420 (816)
T 3dmk_A 355 VDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-------------ESVLRIESVK-KEDKGMYQCFVRNDRESAEASAE 420 (816)
T ss_dssp CCTTSCEEEEEEEEEECCCEEEEEETTEECSCC-------------SSEEEESSCC-GGGCEEEEEEEECSSCEEEECCE
T ss_pred ecCCCCEEEEEEEeccCCCEEEEEECCEECCCC-------------CCEEEEcCCC-HHHCEEEEEEEECCCCcEEEEEE
Confidence 568999999999999999999999999988631 4689999999 99999999999998887777777
Q ss_pred EEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe----eCC----CEEEcCCC
Q psy14886 81 LRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF----ENG----NLLISPVS 150 (505)
Q Consensus 81 l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~----~~~----~l~i~~v~ 150 (505)
+.|.. .+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+....+.... .++ .|.|.++.
T Consensus 421 l~v~~~~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 498 (816)
T 3dmk_A 421 LKLGGRFDPPVIRQAF--QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVH 498 (816)
T ss_dssp EECCCSSCCCEEEEEC--CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCC
T ss_pred EEEccccCCCceEecC--cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeecc
Confidence 77752 345444433 3456889999999999999999999999999998766655432 122 49999999
Q ss_pred CCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc
Q psy14886 151 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 230 (505)
.+|+|.|+|.|.|..|.....+.|.|...|.+. ......+..|+.+.|.|.+.+.|.+ .+.|++++..+....
T Consensus 499 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~--~~~~~~v~~G~~v~l~C~~~g~p~~--~i~W~k~~~~l~~~~--- 571 (816)
T 3dmk_A 499 ANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIR--QMEKKAIVAGETLIVTCPVAGYPID--SIVWERDNRALPINR--- 571 (816)
T ss_dssp TTTCEEEEEEEEETTEEEEEEEEEEECSSCEEC--CCCCEEEETTCCEEEECCEECSSEE--EEEEEETTEESCCST---
T ss_pred ccCCEEEEEEEEECCCeEEEEEEEEEecCCeeE--ccCCeEEecCCeEEEEEEecCCCCC--EEEEEECCeEcccCC---
Confidence 999999999999999998888999997766442 3445678899999999999987654 677999998876432
Q ss_pred ccCCeeeecCCeEEEecCC-CCCCEEEEEEEEecCCcE-EEEEEEEEcCCCCCCC--ceEEEEEeCCeEEEEeecCCCCC
Q psy14886 231 LETPNINIDGGLLEITNAS-FADAGEYECVVKSTVGKI-STKTTVIVEGPPGLPG--GVQVVEVHKTSATIQWTDGATNG 306 (505)
Q Consensus 231 ~~~~~~~~~~~~l~i~~~~-~~~~g~y~C~~~n~~g~~-~~~~~l~v~~~p~~p~--~~~~~~~~~~~v~l~w~~~~~~~ 306 (505)
......++.|.|..+. .+|.|.|+|.|.|..|.. ...+.+.+..+|.... ........+..++|.|.... +
T Consensus 572 ---~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~--~ 646 (816)
T 3dmk_A 572 ---KQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPG--G 646 (816)
T ss_dssp ---TEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCC--S
T ss_pred ---ceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeC--C
Confidence 2223356789999997 589999999999999864 4566777766654321 11123456789999998532 2
Q ss_pred CCCceEEEEEEeCCCCCeEEeeeccccceeeeecC-ceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCC
Q psy14886 307 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG-RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 385 (505)
Q Consensus 307 ~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~ 385 (505)
.+...+.+.. .+... ... .......... ...+.+.. +...+.+.|+|.|.|..|....+... .+..++..
T Consensus 647 ~~~~~i~W~~--~g~~l----~~~-~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~g~~~~~~~l-~V~~~P~~ 717 (816)
T 3dmk_A 647 DLPLNIDWTL--DGQAI----SED-LGITTSRVGRRGSVLTIEA-VEASHAGNFTCHARNLAGHQQFTTPL-NVYVPPRW 717 (816)
T ss_dssp SSCCEEEEEE--TTBCC----CGG-GTCEEEEETTTEEEEEEES-CCGGGCEEEEEEEECSSCEEEEEEEE-CEEEEEEE
T ss_pred CCCCEEEEEE--CCeEc----CCC-CCeeEEEcCCCeeEEEEcc-CChhhCEEEEEEEEeCCccEEEEEEE-EEEeCCce
Confidence 2222344332 11100 000 0000011112 23444555 99999999999999999987543322 12111110
Q ss_pred CCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC---CcEEEEeeecCceeeEEEEcCCccceeeEE
Q psy14886 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---EFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462 (505)
Q Consensus 386 p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 462 (505)
...|....+. ....+.|.+.. .+..+. .|.|...+.. .................+.|.++.+.-.=.
T Consensus 718 -~~~~~~~~v~--~G~~v~l~C~~----~g~P~p---~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 787 (816)
T 3dmk_A 718 -ILEPTDKAFA--QGSDAKVECKA----DGFPKP---QVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGY 787 (816)
T ss_dssp -EECCCCEEEE--TTCCEEEECEE----EEESCC---EEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEE
T ss_pred -eeecccceec--CCCcEEEEEEE----ecCCCC---eEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeE
Confidence 1122233332 23445555543 111111 3444443210 000000000000011145666666666666
Q ss_pred EEEEEecCCCCCCCCceEEEeec
Q psy14886 463 VKVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 463 ~~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
++..|.|.+|.+..+-...+.-.
T Consensus 788 Y~C~a~N~~G~~~~~v~~~~~~~ 810 (816)
T 3dmk_A 788 YLCEAINGIGSGLSAVIMISVQA 810 (816)
T ss_dssp EEEEEECSSSSCEEEEEEEEEEC
T ss_pred EEEEEEeCCCCCcEEEEEEEeec
Confidence 78889999999876655555443
No 18
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=4.2e-33 Score=264.96 Aligned_cols=341 Identities=23% Similarity=0.322 Sum_probs=235.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEE--EECCeEEEE----cCCCCCCCeEEEEEEEcccCc
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF--IQDNVLTIR----YLNPERDPAMYQCRAKNQLKT 74 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~--~~~~~L~i~----~~~~~~d~G~Y~C~~~~~~~~ 74 (505)
|.+|++++|.|.+.|.|.+.|.|+|+|..+.... ..++. ..+++|.|. +++ .+|+|.|+|.+.|..|.
T Consensus 29 v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~-----~~~~~~~~~~~~l~i~~~~~~~~-~~D~G~Y~C~a~n~~g~ 102 (404)
T 3p3y_A 29 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAK-----DPRVSMRRRSGTLVIDFRSGGRP-EEYEGEYQCFARNKFGT 102 (404)
T ss_dssp ECSSSCCCCCEEECCSSCCEEEEEETTEECCGGG-----CSSCBCCSSSCCCBCCCTTTCCT-TSSCEEEEEEEECSSCE
T ss_pred EcCCCCEEEEEEecCCCCCeEEEEECCEEeeeec-----CCcceEecCCceEEEEeccCCCC-ccCCEEEEEEEEcCCCe
Confidence 4689999999999999999999999999886321 12222 235667665 788 89999999999998887
Q ss_pred eE-eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCE-EecCCCcEEEeeCCCEEEcCCCC
Q psy14886 75 RY-SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGN-IIGSGGRRKIFENGNLLISPVSR 151 (505)
Q Consensus 75 ~~-~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~-~~~~~~~~~~~~~~~l~i~~v~~ 151 (505)
.. ..+.|.|.. +|.+.... .....+.+|+.+.|.|.+ .+.|.+.+.|++++. .+....+.....++.|.|.++..
T Consensus 103 ~~s~~~~l~V~~-~p~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~ 180 (404)
T 3p3y_A 103 ALSNRIRLQVSK-SPLWPKEN-LDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVML 180 (404)
T ss_dssp EEEEEEEEEECC-CCCCCCCC-CCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCS
T ss_pred EeeeeEEEEEec-cCccccCC-CCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeee
Confidence 65 457778875 44433322 233678999999999998 778889999999874 44445566666778999999999
Q ss_pred CC-CEEEEEEEEcCCCceee---eEEEEEEeCCe-------eeeeC--CCceEEEeeccEEEEEEeeecCCCCeEEEEEe
Q psy14886 152 DD-SGIYSCTATNVHGMDES---KGRLIVLHGPS-------YYEQL--PPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218 (505)
Q Consensus 152 ~d-~G~y~C~~~~~~g~~~~---~~~l~v~~~p~-------~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~ 218 (505)
.| +|.|+|.+.|..+.... .+.+.+...+. +.... .....+..|+.+.|.|.+.+.|.+ .+.|++
T Consensus 181 ~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~--~v~W~~ 258 (404)
T 3p3y_A 181 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTP--DIAWYK 258 (404)
T ss_dssp GGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCC--EEEEEE
T ss_pred ccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCC--cEEEEE
Confidence 99 59999999998776432 24555543222 11110 123457889999999999887765 677999
Q ss_pred CCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCce-EEEEEeCCeEEE
Q psy14886 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV-QVVEVHKTSATI 297 (505)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~-~~~~~~~~~v~l 297 (505)
++..+.... ......+..|.|..+..+|.|.|+|.|.|..|.....+.|.|..+|...... ......+..+.|
T Consensus 259 ~~~~~~~~~------~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l 332 (404)
T 3p3y_A 259 KGGDLPSDK------AKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRL 332 (404)
T ss_dssp TTBCCCTTT------EEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEE
T ss_pred CCEECCCCc------ccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEE
Confidence 988775432 2334446789999999999999999999999998888999887665311111 122334566777
Q ss_pred EeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccce--eeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 298 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 298 ~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~--~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
.|... +.|.. ...|......+.... .........+.+.. +...+.+.|+|.|.|..|...
T Consensus 333 ~C~~~---g~p~p----------~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 394 (404)
T 3p3y_A 333 VCRAN---GNPKP----------TVQWMVNGEPLQSAPPNPNREVAGDTIIFRD-TQISSRAVYQCNTSNEHGYLL 394 (404)
T ss_dssp ECEEE---EESCC----------EEEEEETTEEGGGSCCCTTEEEETTEEEESS-CCSSCCCEEEEEEEETTEEEE
T ss_pred EEEcc---ccCCC----------ceEEEECCEecCCCCCCceEEecCCEEEEee-cCHHHCEEEEEEEEeCCCcEE
Confidence 77631 12222 223333222221100 00000122444554 999999999999999999764
No 19
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=251.02 Aligned_cols=259 Identities=27% Similarity=0.457 Sum_probs=189.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE---EC---CeEEEEcCCCC-CCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI---QD---NVLTIRYLNPE-RDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~---~~---~~L~i~~~~~~-~d~G~Y~C~~~~~~~ 73 (505)
+.+|++++|.|.+.|.|.+.|+|+|+|..+.. .++.. .+ ..|.|.+++ . +|+|.|+|.+.|..|
T Consensus 18 v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~--------~~~~~~~~~~~~~~~L~i~~~~-~~~D~G~Y~C~a~n~~g 88 (304)
T 2yd9_A 18 GVSGGVASFVCQATGDPKPRVTWNKKGKKVNS--------QRFETIEFDESAGAVLRIQPLR-TPRDENVYECVAQNSVG 88 (304)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEC-------C--------TTEEEEEETTTTEEEEEECSCC-TTTTCSEEEEEEECSSC
T ss_pred ecCCCeEEEEEEEEEeCCCeEEEEECCEECCC--------CceEEEEecCCCceEEEEeccc-ccCCCeEEEEEEECCCC
Confidence 35899999999999999999999999998752 23322 22 579999999 8 999999999999988
Q ss_pred ceEeeEEEEEEecC------CCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC---CcEEEeeCCCE
Q psy14886 74 TRYSSAQLRVLTLK------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNL 144 (505)
Q Consensus 74 ~~~~~~~l~v~~~~------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~---~~~~~~~~~~l 144 (505)
.....+.|.|...+ |.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .+.....++.|
T Consensus 89 ~~~~~~~l~V~~~~~~p~~~p~i~~~~--~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L 166 (304)
T 2yd9_A 89 EITVHAKLTVLREDQLPSGFPNIDMGP--QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGAL 166 (304)
T ss_dssp EECCEEEEEEECGGGCCTTCCEEEECC--CCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCE
T ss_pred eEEEEEEEEEeccccCCCCCCeeecCC--ccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEE
Confidence 87778888888532 3333333 4466889999999999999999999999999987643 24445566789
Q ss_pred EEcCCCCCCCEEEEEEEEcCCCceeee-EEEEEEe--CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCE
Q psy14886 145 LISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221 (505)
Q Consensus 145 ~i~~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~ 221 (505)
.|.++..+|+|.|+|.|.|..|..... +.+.|.. .++.+...+....+..|+.+.|.|.+.+.|.| .+.|++++.
T Consensus 167 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~~~~~ 244 (304)
T 2yd9_A 167 QIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMP--YVKWMQGAE 244 (304)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCC--EEEEEETTE
T ss_pred EEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCC--EEEEEECCE
Confidence 999999999999999999998876644 5555542 23333334555667889999999999998876 567999998
Q ss_pred EecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCC
Q psy14886 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281 (505)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~ 281 (505)
.+..... .......|.+..+ +|+|.|+|.|.|..|.....+.|.|..++..
T Consensus 245 ~l~~~~~-------~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 245 DLTPEDD-------MPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLPKA 295 (304)
T ss_dssp ECSCSSS-------CCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-------
T ss_pred ECCCccc-------ccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCccc
Confidence 8865321 1112224555544 6899999999999999999999999876643
No 20
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=261.30 Aligned_cols=336 Identities=13% Similarity=0.094 Sum_probs=210.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|++++|.|.+.+.|.+.|.|++++..+..... .....+. ..+|.|.+++ .+|+|.|+|.|.|..|.....+.
T Consensus 60 V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~-~~~~~~~---~~sL~I~~v~-~~D~G~Y~C~a~N~~g~~~~~~~ 134 (423)
T 3qs7_E 60 VDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPH-FDLQNRG---VVSMVILKMT-ETQAGEYLLFIQSEATNYTILFT 134 (423)
T ss_dssp ECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCB-C-----C---EEEEEESSCC-SSSCSEEEEEEEC--CEEEEEEE
T ss_pred EecCCcEEEEEEEEcCCCCeEEEEECCCccCccce-eccccce---EEEEEEeecC-cccCEEEEEEEEcCCCcEEEEEE
Confidence 57999999999999999999999999987753211 0011111 1369999999 99999999999999888777788
Q ss_pred EEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC---CcEEEeeCCCEEEcCCCCCCCEEE
Q psy14886 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 81 l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~---~~~~~~~~~~l~i~~v~~~d~G~y 157 (505)
|.|.. +|.+. +..+ ..+..|+.+.|.|.+.|.|.|.|.|++++..+... ....+.....+ + ...|+|.|
T Consensus 135 l~V~~-~p~~~--~~~p-~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~-l---~~~d~G~Y 206 (423)
T 3qs7_E 135 VSIRN-TLLYT--LRRP-YFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKV-L---HELFGTDI 206 (423)
T ss_dssp EEEC------C--EEEE-EEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSE-E---CCCCSSCE
T ss_pred EEEec-Ccccc--ccCC-cEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceE-E---ecccCeEE
Confidence 88874 44332 1112 33566888899999999999999999988754321 00111111111 1 57899999
Q ss_pred EEEEEcCCCceeee-EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeee-cCCCCeEEEEEeCCEEecCCCCC---ccc
Q psy14886 158 SCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMDLN---ELE 232 (505)
Q Consensus 158 ~C~~~~~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~~~w~~~~~~~~~~~~~---~~~ 232 (505)
+|.|.|..|..... +.|.|...|.. .+....+..|+.+.|.|.+.+ .+.+ .+.|++++..+...... ...
T Consensus 207 ~C~A~N~~G~~~~~~~~l~V~~~p~~---~~~~~~v~~G~~v~L~C~~~g~~p~p--~i~W~k~g~~l~~~~~~~~~~~~ 281 (423)
T 3qs7_E 207 RCCARNELGRECTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGF--GLTWELENKALEEGNYFEMSTYS 281 (423)
T ss_dssp EEEEECSSCEEEEECEEEESSSCCCS---STTEEEEETTSCEEEEEEEEESSSCC--CEEEEESSSBCCGGGEEEEEEEE
T ss_pred EEEEEcCCCCcceeeEEEEEecCCcc---CCCceEEeCCCeEEEEEEEEcCCCCc--EEEEEECCEEccccceeeccccc
Confidence 99999999876553 56666554443 344667889999999999998 4444 45699998766432100 000
Q ss_pred CCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCC---CceEEEEEeCCeEEEEeecCCCCCCCC
Q psy14886 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP---GGVQVVEVHKTSATIQWTDGATNGRPI 309 (505)
Q Consensus 233 ~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p---~~~~~~~~~~~~v~l~w~~~~~~~~~i 309 (505)
..........|.|..+..+|+|.|+|.|.|. ....+.|.|..+|... ....+....+..+.
T Consensus 282 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~------------- 345 (423)
T 3qs7_E 282 TNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFC------------- 345 (423)
T ss_dssp TTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCC-------------
T ss_pred CCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEE-------------
Confidence 0011222347999999999999999999997 6777888887665311 00011111223333
Q ss_pred ceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCC
Q psy14886 310 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 372 (505)
Q Consensus 310 ~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~ 372 (505)
..|.+...+.....|......+..... ............ ....+.+.|.|.|.|..|....
T Consensus 346 l~C~~~g~P~p~i~W~k~g~~l~~~~~-~~~~~~~~~~~~-~~~~D~G~YtC~A~N~~G~~~~ 406 (423)
T 3qs7_E 346 FSVRFKAYPQIRCTWTFSRKSFPCEQK-GLDNGYSISKFC-NHKHQPGEYIFHAENDDAQFTK 406 (423)
T ss_dssp EEEEEEEESCCEEEEEETTEEEECBCC-BCSSSSEEEEEC-CCTTCCSCEEEEEEETTEEEEE
T ss_pred EEEEEEEcCCCeEEEEECCEECCCccc-cccCCcEEEEEe-cccccCEEEEEEEEcCCceEEE
Confidence 345555555555666665444321100 000111111133 6678999999999999998753
No 21
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=242.98 Aligned_cols=260 Identities=22% Similarity=0.360 Sum_probs=196.4
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEE-CCEECcCCCCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~-~~~~l~~~~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
|.+|+.++|.|.+.+.|. .+.|+| ++..+. ...++... + .+|.|.+++ .+|+|.|+|.+.|..+..
T Consensus 16 v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~-------~~~~~~~~~~~~~~~L~i~~~~-~~D~G~Y~C~~~n~~g~~ 86 (291)
T 2wim_A 16 LSVGESKFFTCTAIGEPE-SIDWYNPQGEKII-------STQRVVVQKEGVRSRLTIYNAN-IEDAGIYRCQATDAKGQT 86 (291)
T ss_dssp EETTCCEEEEEEEESCCS-EEECBCTTCCBCC-------CBTTEEEEEETTEEEEEECSCC-GGGCEEEEEEEECSSSCE
T ss_pred ecCCCcEEEEEEEeCCCC-ceEEECCCCcCcc-------CCCcEEEecCCCEEEEEEccCC-cccCEEEEEEEecccCce
Confidence 468999999999998775 899999 676665 33455442 2 489999999 999999999999988776
Q ss_pred E-eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecC--CCcEEEeeCCCEEEcCCCCC
Q psy14886 76 Y-SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRD 152 (505)
Q Consensus 76 ~-~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~--~~~~~~~~~~~l~i~~v~~~ 152 (505)
. ..+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++....++.|.|.++...
T Consensus 87 ~~~~~~l~v~~-~~~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 163 (291)
T 2wim_A 87 QEATVVLEIYQ-KLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKS 163 (291)
T ss_dssp EEEEEEEEEEC-CCBCCSCC--CSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGG
T ss_pred EEEEEEEEecC-CcceEeCC--CChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchh
Confidence 4 356677764 55555444 445689999999999999999999999999987753 45566666788999999999
Q ss_pred CCEEEEEEEEcCCCcee--eeEEEEEEeCCeeeeeCCC-ceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCC
Q psy14886 153 DSGIYSCTATNVHGMDE--SKGRLIVLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229 (505)
Q Consensus 153 d~G~y~C~~~~~~g~~~--~~~~l~v~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~ 229 (505)
|.|.|+|.+.+..+... ..+.+.+..+|.+...... ...+..|+.+.|.|.+.+.|.+ .+.|+++|..+.....
T Consensus 164 d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~g~~~~~~~~- 240 (291)
T 2wim_A 164 DEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP--AISWFRNGKLIEENEK- 240 (291)
T ss_dssp GCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCC--EEEEEETTEECCCTTT-
T ss_pred hCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCC--eEEEEECCEECcCCcc-
Confidence 99999999998875543 3356666666655432211 3345679999999999988765 5679999998865321
Q ss_pred cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 230 ~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
......+..|.|..+..+|.|.|+|.|.|..|.....+.|.|..++
T Consensus 241 ----~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 241 ----YILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp ----EEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred ----EEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 1222345689999999999999999999999999999999988765
No 22
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=1.4e-31 Score=242.35 Aligned_cols=264 Identities=24% Similarity=0.391 Sum_probs=200.3
Q ss_pred CCCCCceEEEEEEeccC-CCeEEEEE-CCEECcCCCCCCCCCCcEEE-----ECCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFGVP-DVTYSWFR-NGELLNSETLPLEDQDRYFI-----QDNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-~~~~~W~~-~~~~l~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
|.+|+.++|.|.+.+.| .+.+.|+| +|..+.. ...++.. ..++|.|.+++ .+|+|.|+|.+.|..+
T Consensus 14 v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~------~~~~~~~~~~~~~~~~L~i~~~~-~~D~G~Y~C~~~n~~g 86 (291)
T 1qz1_A 14 ISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSP------NQQRISVVWNDDDSSTLTIYNAN-IDDAGIYKCVVTAEDG 86 (291)
T ss_dssp EETTCCEEEEEEESSCCSCCEEEEECTTSCBCCS------SCSSEEEEEEETTEEEEEECSCC-GGGCEEEEEEEECTTS
T ss_pred EeCCCeEEEEEEeCCCCCCcEeEEECCCCeECcc------CCceEEEEEcCCCeEEEEEecCC-CCCCEEEEEEEEcCCC
Confidence 46899999999999876 69999999 7777763 2344443 23589999999 9999999999999875
Q ss_pred c-eEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecC--CCcEEEeeCCCEEEcCCC
Q psy14886 74 T-RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVS 150 (505)
Q Consensus 74 ~-~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~--~~~~~~~~~~~l~i~~v~ 150 (505)
. ....+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++....++.|.|.++.
T Consensus 87 ~~~~~~~~l~v~~-~~~~~~~~--~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 163 (291)
T 1qz1_A 87 TQSEATVNVKIFQ-KLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK 163 (291)
T ss_dssp CEEEEEEEEEEEC-CSEEEECC--SSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCC
T ss_pred CeeEEEEEEEeec-cccccCCC--CcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCc
Confidence 4 34456777764 55555444 345688999999999999999999999999987653 345556667789999999
Q ss_pred CCCCEEEEEEEEcCCCce--eeeEEEEEEeCCeeeeeCC-CceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCC
Q psy14886 151 RDDSGIYSCTATNVHGMD--ESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~--~~~~~l~v~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~ 227 (505)
.+|+|.|+|.+.|..+.. ...+.+.|..+|.+..... ....+..|+.+.|.|.+.+.|.| .+.|++++..+....
T Consensus 164 ~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~i~W~~~g~~~~~~~ 241 (291)
T 1qz1_A 164 KTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEP--TMSWTKDGEPIENEE 241 (291)
T ss_dssp GGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCC--EEEEEETTEECCCC-
T ss_pred cccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCC--cEEEEECCEECcCCC
Confidence 999999999999876433 2346677766665543322 13456689999999999998776 567999999886532
Q ss_pred CCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 228 ~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
... ...........|.|..+..+|.|.|+|.|.|..|..+..+.|.|..
T Consensus 242 ~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 242 EDD-EKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp -CC-SSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCC-cceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 100 0112222356899999999999999999999999999888888854
No 23
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=9.7e-32 Score=264.13 Aligned_cols=268 Identities=16% Similarity=0.161 Sum_probs=204.4
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEE-CCEECcCCCCCCCCCCcEEE-ECCeEEEEcCCCCCCCe-EEEEEEEcccCceEe
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPA-MYQCRAKNQLKTRYS 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~-~~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G-~Y~C~~~~~~~~~~~ 77 (505)
+.+|+.++|.|.+.+.+.+.|+|++ ++..+. ...++.. .++.|.|.+++ .+|+| .|+|.+.|..+...+
T Consensus 126 v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~-------~~~~~~~~~~~~L~i~~~~-~~d~G~~Y~C~a~n~~~~~~s 197 (524)
T 2ec8_A 126 GKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLP-------KDLRFIPDPKAGIMIKSVK-RAYHRLCLHCSVDQEGKSVLS 197 (524)
T ss_dssp EETTSCEEECCCBSCCCCSCEEEECSSSCCCC-------SSCEEEEETTTEEEEESCC-GGGTTCEEEEEEC----CCCC
T ss_pred EEcCCeEEEECcCCCCccceEEEEccCCcCcC-------CCCceeECCCccEEEeccc-hhhCCceEEEEEEECCceEEE
Confidence 3579999999999886679999998 787775 3455655 46799999999 99999 999999987766544
Q ss_pred -eEEEEEE---ecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCe-EEEEECCEEe--cCCCcEE------EeeCCCE
Q psy14886 78 -SAQLRVL---TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK-FVWKKDGNII--GSGGRRK------IFENGNL 144 (505)
Q Consensus 78 -~~~l~v~---~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-i~W~~~g~~~--~~~~~~~------~~~~~~l 144 (505)
.+.|.|. ..+|.+...+ ....+.+|+++.|.|.+.+.|.+. +.|++++..+ ....+.. ....+.|
T Consensus 198 ~~~~l~V~~~~~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 275 (524)
T 2ec8_A 198 EKFILKVRPAFKAVPVVSVSK--ASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATL 275 (524)
T ss_dssp CCEECCEECCCCSCCEEECSC--SEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEE
T ss_pred EEEEEEEEeCCCCCCcEEecC--CcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEE
Confidence 6778776 3466666654 445789999999999999988775 9999998873 2221111 1224579
Q ss_pred EEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCC--CceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEE
Q psy14886 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP--PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222 (505)
Q Consensus 145 ~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~--~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~ 222 (505)
.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+. ....+..|+.+.|.|.+.+.|.|. .+.|++++..
T Consensus 276 ~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~-~v~W~k~g~~ 354 (524)
T 2ec8_A 276 TISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPE-HQQWIYMNRT 354 (524)
T ss_dssp EESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCC-EEEEESSSCB
T ss_pred EECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCc-EEEEEECCee
Confidence 9999999999999999999999998889999988777655432 357788999999999999988775 3679999887
Q ss_pred ecCCCCCc--ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 223 IGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 223 ~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
+....... ............|.|..+..+|.|.|+|.|.|..|..+..+.|.|..+|
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 413 (524)
T 2ec8_A 355 FTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKP 413 (524)
T ss_dssp CSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEE
T ss_pred ccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCC
Confidence 76532100 0000000123579999999999999999999999999999999987655
No 24
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.2e-31 Score=254.06 Aligned_cols=341 Identities=20% Similarity=0.221 Sum_probs=231.0
Q ss_pred CCCCCceEEEEEEec-cCCCeEEEEECCEECcCCCCCCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEEcccCceEe
Q psy14886 1 MDNQADLTWTCEAFG-VPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~~-~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~ 77 (505)
+.+|+.++|.|.+.+ .|.+.++|+|+|..+... ..++.. .+++|.|.+++ .+|+|.|+|.+.|..|...+
T Consensus 18 v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~------~~~~~~~~~~~~L~i~~~~-~~D~G~Y~C~a~n~~g~~~s 90 (395)
T 1bih_A 18 FRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQ------EHNAALRKDEGSLVFLRPQ-ASDEGHYQCFAETPAGVASS 90 (395)
T ss_dssp EETTSCEEECCCEESCCSSCEEEEEESSSBCCTT------TTTEEECTTSCCEEESSCC-GGGCEEEEEEEEETTEEEEC
T ss_pred EeCCCEEEEEEEEecCCCCceEEEEECCcCcccc------cceEEEecCCceEEEecCC-CCCCcEEEEEEEeCCCeEEe
Confidence 368999999999998 788999999999988743 112322 45789999999 99999999999998776553
Q ss_pred -eEEEEEEec-CCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECC---EEecC----CCcEEEeeCCCEEEc
Q psy14886 78 -SAQLRVLTL-KPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDG---NIIGS----GGRRKIFENGNLLIS 147 (505)
Q Consensus 78 -~~~l~v~~~-~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g---~~~~~----~~~~~~~~~~~l~i~ 147 (505)
.+.+.|... .|.+ . .....+.+|+.+.|.|.+ .+.|.+.+.|++++ .+... ..+.....++.|.|.
T Consensus 91 ~~~~l~v~~~~~p~~--~--~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 166 (395)
T 1bih_A 91 RVISFRKTYLIASPA--K--THEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFT 166 (395)
T ss_dssp CCEEEEEEEEECCCC--E--EEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEE
T ss_pred EEEEEEEEEeecCCc--C--CcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEE
Confidence 355555532 2222 2 234567899999999996 67788999999976 22211 345666667889999
Q ss_pred CCCCCCCE---EEEEEEEcCCCceeeeEEEEEEe---CC-------eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEE
Q psy14886 148 PVSRDDSG---IYSCTATNVHGMDESKGRLIVLH---GP-------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214 (505)
Q Consensus 148 ~v~~~d~G---~y~C~~~~~~g~~~~~~~l~v~~---~p-------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~ 214 (505)
++...|.| .|+|.+.|..+............ .+ ......+....+..|+.+.|.|.+.+.|.+. +
T Consensus 167 ~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~--i 244 (395)
T 1bih_A 167 IVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGY--P 244 (395)
T ss_dssp EECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCC--C
T ss_pred EEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCCCe--E
Confidence 99999999 99999999988755443222211 00 0011124567788999999999999887765 5
Q ss_pred EEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEE-EEEEEEcCCCCCCCce--EEEEEe
Q psy14886 215 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST-KTTVIVEGPPGLPGGV--QVVEVH 291 (505)
Q Consensus 215 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~-~~~l~v~~~p~~p~~~--~~~~~~ 291 (505)
.|++++..+.......... .....+..|.|..+..+|.|.|+|.|.|..|.... .+.|.|..+|.....+ ......
T Consensus 245 ~W~~~g~~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~ 323 (395)
T 1bih_A 245 NYFKNGKDVNGNPEDRITR-HNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQ 323 (395)
T ss_dssp EEEETTEECCCCTTSSEES-CSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECT
T ss_pred EEEECCEEcCCCCceeEEE-EecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecC
Confidence 6999998876532111100 00112347999999999999999999999998655 8888887655321111 123345
Q ss_pred CCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 292 KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 292 ~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
+..+.|.|.. ...+.....|......+....... ....+.+.+ +...+.+.|+|.|.|..|...
T Consensus 324 g~~~~l~C~~-------------~g~p~p~v~W~~~g~~~~~~~~~~--~~~~L~i~~-~~~~d~G~Y~C~a~N~~G~~~ 387 (395)
T 1bih_A 324 GQDVTIPCKV-------------TGLPAPNVVWSHNAKPLSGGRATV--TDSGLVIKG-VKNGDKGYYGCRATNEHGDKY 387 (395)
T ss_dssp TSCEEEECEE-------------EEESCCCCEEEETTEECCSSSEEE--ETTEEEESS-CCSTTCEEEEEEEEETTEEEE
T ss_pred CCeEEEEEEE-------------CcccCCeeEEEECCEECCCCceEE--ECCEEEEee-CCcccCEEEEEEEEccCCCce
Confidence 5667777763 222222334444333222111111 112445555 999999999999999999754
No 25
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=2.5e-31 Score=261.21 Aligned_cols=334 Identities=13% Similarity=0.082 Sum_probs=232.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|+.++|.|.+.+ .++|+|++.++. .....++|.|.+++ .+|+|.|+|.+.| |. ...+.
T Consensus 48 v~~G~~v~l~C~~~~----~v~W~~~~~~~~-----------~~~~~~~L~I~~~~-~~D~G~Y~C~a~n--g~-~~~~~ 108 (524)
T 2ec8_A 48 VRVGDEIRLLCTDPG----FVKWTFEILDET-----------NENKQNEWITEKAE-ATNTGKYTCTNKH--GL-SNSIY 108 (524)
T ss_dssp CCTTSCEEEEEECTT----EEEEEEESSSCC-----------EEECSSEEEESSCC-STTCEEEEEEETT--SC-EEEEE
T ss_pred EeCCCeEEEEEeCCc----eEEEcCCCcccc-----------ccCccceEEEcccc-hhhCEEEEEeecC--Cc-ceEEE
Confidence 578999999999976 899999987551 23356899999999 9999999999998 43 55677
Q ss_pred EEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEE-CCEEecCCCcEEEeeCCCEEEcCCCCCCCE-EEE
Q psy14886 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSG-IYS 158 (505)
Q Consensus 81 l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~-~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~y~ 158 (505)
|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.+.+.+.|++ +|..+..+.++....++.|.|.++..+|+| .|+
T Consensus 109 l~V~~-p~~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~ 185 (524)
T 2ec8_A 109 VFVRD-PAKLFLVD--RSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLH 185 (524)
T ss_dssp EECCC-SSCSBCCC--CCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEE
T ss_pred EEECC-CCcccccc--cceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEE
Confidence 77774 44444333 44568899999999999987778999988 888887777777777788999999999999 999
Q ss_pred EEEEcCCCceee-eEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEe--cCCCCCccc
Q psy14886 159 CTATNVHGMDES-KGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELE 232 (505)
Q Consensus 159 C~~~~~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~--~~~~~~~~~ 232 (505)
|.|.|..+.... .+.|.|.. .|+.+...+....+..|+.+.|.|.+.+.+.+. .+.|++++..+ .........
T Consensus 186 C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~-~i~W~~~~~~~~~~~~~~~~~~ 264 (524)
T 2ec8_A 186 CSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSV-YSTWKRENSQTKLQEKYNSWHH 264 (524)
T ss_dssp EEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTC-EEEEEETTCSCCCCEEEEEEEC
T ss_pred EEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcE-EEEEEeCCCCCccccccccccc
Confidence 999998776644 57788862 333344445566789999999999999877653 46799988763 211100000
Q ss_pred CCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCc----eEEEEEeCCeEEEEeecCCCCCCC
Q psy14886 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG----VQVVEVHKTSATIQWTDGATNGRP 308 (505)
Q Consensus 233 ~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~----~~~~~~~~~~v~l~w~~~~~~~~~ 308 (505)
..........|.|..+..+|.|.|+|.|.|..|.....+.|.|..+|..... .......+..+.|.|... +.|
T Consensus 265 ~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~---g~P 341 (524)
T 2ec8_A 265 GDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYE---AFP 341 (524)
T ss_dssp SSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEE---EES
T ss_pred cCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEe---ecC
Confidence 0001233468999999999999999999999999888999999876643211 123344566788888731 112
Q ss_pred Cce-EEEEEEeCCCCCeEEeeeccccce--eeeec------CceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 309 ITH-YKIIARTNWNSTWFNVSEHVIGKE--VDRYT------GRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 309 i~~-y~v~~~~~~~~~w~~~~~~~~~~~--~~~~~------~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
... +. |......+.... ..... ....+.+.+ +...+.+.|+|.|.|..|...
T Consensus 342 ~p~~v~----------W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~g~~~ 402 (524)
T 2ec8_A 342 KPEHQQ----------WIYMNRTFTDKWEDYPKSENESNIRYVSELHLTR-LKGTEGGTYTFLVSNSDVNAA 402 (524)
T ss_dssp CCCEEE----------EESSSCBCSSSBCCEESCCSSSCCEEEEEEEECS-CCGGGCEEEEEEEECSSCEEE
T ss_pred CCcEEE----------EEECCeeccCCccceeEEccCCCceeEEEEEEee-cCcccCeEEEEEEEecCceEE
Confidence 211 22 222221111100 00000 112444444 899999999999999999853
No 26
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-31 Score=254.36 Aligned_cols=263 Identities=26% Similarity=0.450 Sum_probs=209.6
Q ss_pred CCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE-ECCeEEEEcCCCCCCCeEEEEEEEcccCceE-eeE
Q psy14886 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRY-SSA 79 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~-~~~ 79 (505)
.+|++++|.|.+.+.|.+.+.|+|++..+.... ...+... .+++|.|.+++ .+|+|.|+|.+.|..+... ..+
T Consensus 134 ~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~----~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~~~~~~~~~~ 208 (403)
T 3laf_A 134 FMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIP----GDSRVVVLPSGALQISRLQ-PGDSGVYRCSARNPASTRTGNEA 208 (403)
T ss_dssp ETTSCEEECCCEECSSCCEEEEEESSSBCCCCT----TCCSEEECTTSCEEECSCC-GGGCEEEEEEEECSSCCCBCCCE
T ss_pred EcCCeEEEEEEEcccCCCeEEEEECCEeccccC----CceEEEEcCCceEEEcccc-cccCEEEEEEEEcCCCceeccce
Confidence 579999999999999999999999998875221 2233333 46789999999 9999999999999877644 357
Q ss_pred EEEEEecCCCcc----CCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC-CcEEEeeCCCEEEcCCCCCCC
Q psy14886 80 QLRVLTLKPSFK----KRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLISPVSRDDS 154 (505)
Q Consensus 80 ~l~v~~~~p~~~----~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~-~~~~~~~~~~l~i~~v~~~d~ 154 (505)
.+.|.. .|.+. .........+.+|+.+.|.|.+.+.|.+.+.|++++..+... .+.....++.|.|.++..+|+
T Consensus 209 ~l~v~~-~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 287 (403)
T 3laf_A 209 EVRILS-DPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDS 287 (403)
T ss_dssp EEEEEC-CCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGC
T ss_pred eEEEec-CCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHC
Confidence 777775 33221 111124466889999999999999999999999999988643 344455567899999999999
Q ss_pred EEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCC
Q psy14886 155 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234 (505)
Q Consensus 155 G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 234 (505)
|.|+|.|.|..|.....+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|+++|..+.... .
T Consensus 288 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~p--~v~W~~~g~~~~~~~------~ 358 (403)
T 3laf_A 288 GTYTCVVTYKNENISASAELTVLVPPWFLN-HPSNLYAYESMDIEFECAVSGKPVP--TVNWMKNGDVVIPSD------Y 358 (403)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEEEEE-CCCCEECCTTCCEEECCEEEEESCC--EEEEEETTEECCCSS------S
T ss_pred EEEEEEEEcCCCceEEEEEEEEECCCcEee-cCcceEEecCCeEEEEEEEeeccCC--EEEEEECCEECCCCC------c
Confidence 999999999999888889999987766544 3556677889999999999998876 567999998876533 2
Q ss_pred eeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 235 ~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
.....+..|.|..+..+|.|.|+|.|.|..|.....+.|.|..||
T Consensus 359 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 359 FQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp EEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred EEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 223356789999999999999999999999999999999998764
No 27
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=100.00 E-value=5.3e-32 Score=249.21 Aligned_cols=261 Identities=18% Similarity=0.236 Sum_probs=194.7
Q ss_pred CCCCCceEEEEEEecc---------CCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCe-EEEEEEEc
Q psy14886 1 MDNQADLTWTCEAFGV---------PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA-MYQCRAKN 70 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~---------p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G-~Y~C~~~~ 70 (505)
|.+|++++|.|.+.+. |.+.|.|+|++..+.. ..+. ..+++|.|.+++ .+|+| .|+|.|.|
T Consensus 41 v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~-------~~~~-~~~~~L~i~~v~-~~D~Gs~Y~C~a~n 111 (329)
T 3oq3_B 41 AALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRP-------LNRR-VKNGDLWIANYT-SNDSHRRYLCTVTT 111 (329)
T ss_dssp ECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEE-------CSTT-EETTEEEESSCC-GGGGGCCEEEEEEC
T ss_pred EECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccc-------cCce-eecceEEEcCCC-hHhCCCcEEEEEEe
Confidence 4689999999999873 5689999999987652 1222 568899999999 99999 99999999
Q ss_pred ccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCC-CCeEEEEECCEEecCC-CcEEEeeCCCEEEcC
Q psy14886 71 QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGSG-GRRKIFENGNLLISP 148 (505)
Q Consensus 71 ~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~i~W~~~g~~~~~~-~~~~~~~~~~l~i~~ 148 (505)
..|.......+.|...+|.+.... ....+.+|+.+.|.|.+.+.| .+.+.|++++..+... .++.. .++.|.|.+
T Consensus 112 ~~g~~~~~~~~~v~~~~p~~~~~~--~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~-~~~~L~I~~ 188 (329)
T 3oq3_B 112 KNGDCVQGIVRSHIRKPPSCIPET--YELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQ-SGQNLIIHN 188 (329)
T ss_dssp TTSCEEEEEEEEEECCCCSCEEEE--EETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEE-ETTEEEECS
T ss_pred CCCceeeEEEEEEEcCCCcEeccc--cceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEec-CCCEEEEee
Confidence 887655544445554455432221 122356799999999999999 8999999999988633 33333 378899999
Q ss_pred CCCCCCEEEEEEEEcC--CCceeee----EEEEEEeCC----eeeeeCCCceEEEeeccEEEEEEeeecC--CCCeEEEE
Q psy14886 149 VSRDDSGIYSCTATNV--HGMDESK----GRLIVLHGP----SYYEQLPPKITIAAHRNLQLRCSAHTEE--LLDVAYIW 216 (505)
Q Consensus 149 v~~~d~G~y~C~~~~~--~g~~~~~----~~l~v~~~p----~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~~~w 216 (505)
+..+|+|.|+|.|.|. .|..... +.|.|..+| +.+ .+....+..|+.+.|.|.+.+.| .+.+.+.|
T Consensus 189 v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~--~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W 266 (329)
T 3oq3_B 189 PELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI--LDPKINVTIGEPANITCTAVSTSLLVDDVLIDW 266 (329)
T ss_dssp CCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE--CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEE
T ss_pred cChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee--cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEE
Confidence 9999999999999987 6544443 667777665 333 45667888999999999999987 33347789
Q ss_pred EeCCEEecCCCCCcccC--CeeeecCCeEEEecCCCCCCE-EEEEEEEecCCcEEEEEEEEE
Q psy14886 217 THNGVRIGNMDLNELET--PNINIDGGLLEITNASFADAG-EYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 217 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~~~g-~y~C~~~n~~g~~~~~~~l~v 275 (505)
++++..+.......... .........|.|..+..+|.| .|+|.|.|..|.....+.|.|
T Consensus 267 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 267 ENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp ECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred EECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 99987753221100000 000013568999999999999 999999999999888888776
No 28
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=100.00 E-value=2.4e-32 Score=250.36 Aligned_cols=270 Identities=17% Similarity=0.178 Sum_probs=202.9
Q ss_pred CCCCCceEEEEEEeccC-CCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 1 MDNQADLTWTCEAFGVP-DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
|.+|+.++|.|.+.+.| .+.|.|+|++..+... .....++...+++|.|.+++ .+|+|.|+|.+.|..+......
T Consensus 17 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~---~~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~a~n~~g~~~~~~ 92 (315)
T 1itb_B 17 SSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVS---TEQASRIHQHKEKLWFVPAK-VEDSGHYYCVVRNSSYCLRIKI 92 (315)
T ss_dssp EETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSC---CCTTSSSEECSSBEECTTCC-GGGCSCCEECCCSSSCCCCEEC
T ss_pred EcCCCcEEEEeeccCcCCCceEEEEeCCCcCccc---cccCCcEeccCCeEEECCCC-hhhCEEEEEEEeCCceEEEEEE
Confidence 46899999999998876 7899999998654321 12345677777899999999 9999999999999888776666
Q ss_pred EEEEEecCCCccCCCCC-ceEEeeCCCeEEEEeec------CCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCC
Q psy14886 80 QLRVLTLKPSFKKRPLE-SETYAGEGGNVTIFCNP------EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 152 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~-~~~~v~~g~~v~l~C~~------~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~ 152 (505)
.+.+...+|.+...+.. ....+.+|+++.|.|.+ .+.|.+.+.|++++..+..........++.|.|.++..+
T Consensus 93 ~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~ 172 (315)
T 1itb_B 93 SAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEK 172 (315)
T ss_dssp CCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGG
T ss_pred EEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceeh
Confidence 77766656665443311 23568899999999998 888999999999999986544444556778999999999
Q ss_pred CCEEEEEEEE-cCCCcee---eeEEEEEE-----eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEe
Q psy14886 153 DSGIYSCTAT-NVHGMDE---SKGRLIVL-----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223 (505)
Q Consensus 153 d~G~y~C~~~-~~~g~~~---~~~~l~v~-----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~ 223 (505)
|+|.|+|.|. |..|... ..+.+.+. .+|.+.........+..|+.+.|.|.+.+.|.| .+.|+++|..+
T Consensus 173 d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p--~i~W~~~g~~i 250 (315)
T 1itb_B 173 HRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSD--IAYWKWNGSVI 250 (315)
T ss_dssp GCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTS--EEEEEETTEEC
T ss_pred hCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCC--eeEEEECCEEC
Confidence 9999999999 7777763 33444444 234333222222467899999999999998776 56799999988
Q ss_pred cCCCCCcccCCe---------eeecCCeEEEecCCCCC-CEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 224 GNMDLNELETPN---------INIDGGLLEITNASFAD-AGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 224 ~~~~~~~~~~~~---------~~~~~~~l~i~~~~~~~-~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
............ .......|.|..+..+| .|.|+|.|.|..|.....+.|.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 251 DEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp CTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 764311110000 01123489999999999 999999999999999999888774
No 29
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.5e-32 Score=253.99 Aligned_cols=270 Identities=20% Similarity=0.355 Sum_probs=139.1
Q ss_pred CCCCCceEEEEEEecc-CCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 1 MDNQADLTWTCEAFGV-PDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~-p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
|.+|++++|.|.+.+. |.+.+.|+|+|..+. ...++...+++|.|.+++ .+|+|.|+|.+.|. +.....+
T Consensus 20 v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~-------~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~a~n~-~~~~~~~ 90 (334)
T 1ry7_B 20 FGSGDAVELSCPPPGGGPMGPTVWVKDGTGLV-------PSERVLVGPQRLQVLNAS-HEDSGAYSCRQRLT-QRVLCHF 90 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EecCCcEEEEeeCCCCCCCcceEEEECCeeCC-------CcccEEeccceEEEeecc-cccCEEEEEEEEeC-CeEEEEE
Confidence 5689999999999875 578999999999886 345666677899999999 99999999999988 6666667
Q ss_pred EEEEEec---------------------CCCccCCC--CCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcE
Q psy14886 80 QLRVLTL---------------------KPSFKKRP--LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR 136 (505)
Q Consensus 80 ~l~v~~~---------------------~p~~~~~~--~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~ 136 (505)
.|.|... +|.+.... ......+.+|+.+.|.|.+.+.|.+.+.|++++..+....+.
T Consensus 91 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~ 170 (334)
T 1ry7_B 91 SVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRI 170 (334)
T ss_dssp ----------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSST
T ss_pred EEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccc
Confidence 7777642 23332211 123456889999999999999999999999999887654322
Q ss_pred E----EeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCC----eeeeeCCCceEEEeeccEEEEEEeeecC
Q psy14886 137 K----IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP----SYYEQLPPKITIAAHRNLQLRCSAHTEE 208 (505)
Q Consensus 137 ~----~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p----~~~~~~~~~~~~~~g~~~~l~C~~~~~~ 208 (505)
. ......|.|.++...|+|.|+|.+.|..|.....+.|.|...+ .+....+....+..|+.+.|.|.+.+.|
T Consensus 171 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p 250 (334)
T 1ry7_B 171 GGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDA 250 (334)
T ss_dssp TCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSS
T ss_pred cceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCC
Confidence 1 1123469999999999999999999999988888888887632 2222234567788999999999998877
Q ss_pred CCCeEEEEEe----CCEEecCCCCCcc---cCC---eeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCC
Q psy14886 209 LLDVAYIWTH----NGVRIGNMDLNEL---ETP---NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278 (505)
Q Consensus 209 ~~~~~~~w~~----~~~~~~~~~~~~~---~~~---~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~ 278 (505)
.+ .+.|++ +|..+........ ... ........|.|..+..+|.|.|+|.|.|..|.....+.|.|...
T Consensus 251 ~p--~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 328 (334)
T 1ry7_B 251 QP--HIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPA 328 (334)
T ss_dssp CE--EEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECS
T ss_pred CC--eEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEEC
Confidence 65 677998 5555543221000 000 00111247999999999999999999999999999999999876
Q ss_pred CCC
Q psy14886 279 PGL 281 (505)
Q Consensus 279 p~~ 281 (505)
|.+
T Consensus 329 ~~~ 331 (334)
T 1ry7_B 329 EEE 331 (334)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 30
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.98 E-value=4.9e-32 Score=248.66 Aligned_cols=259 Identities=19% Similarity=0.258 Sum_probs=194.1
Q ss_pred CCCCCceEEEEEEecc-CCCeEEEEECCEECcCCCCCCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEEcccCceEe
Q psy14886 1 MDNQADLTWTCEAFGV-PDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~-p~~~~~W~~~~~~l~~~~~~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~ 77 (505)
|.+|+.++|.|.+.+. |.+.+.|+|++..+.. ..++.. ...+|.|.+++ .+|+|.|+|.+.|..+....
T Consensus 18 v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~-------~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~~g~~~~ 89 (317)
T 2y25_A 18 VTGECNVLLKCKVANIKKETHIVWYKDEREISV-------DEKHDFKDGICTLLITEFS-KKDAGIYEVILKDDRGKDKS 89 (317)
T ss_dssp EETTTEEEEEEEEESCCTTCEEEEEETTEEECC-------SCC-----CCEEEEETTCC-STTCSCEEEEEESSSCEEEE
T ss_pred ECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCC-------CCcEEEECCeEEEEEccCC-cccCeEEEEEEECCCCcEEE
Confidence 4689999999999886 7799999999998873 233333 34689999999 99999999999998887665
Q ss_pred eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCC----------CCCCeEEEEECCEEecCCCcEEEeeCC---CE
Q psy14886 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA----------APKPKFVWKKDGNIIGSGGRRKIFENG---NL 144 (505)
Q Consensus 78 ~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~----------~p~~~i~W~~~g~~~~~~~~~~~~~~~---~l 144 (505)
.+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+....+......+ .|
T Consensus 90 ~~~l~v~~-~~~~~~~~--~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L 166 (317)
T 2y25_A 90 RLKLVDEA-FKELMMEV--CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWL 166 (317)
T ss_dssp EECCSTHH-HHHHHHHH--HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEE
T ss_pred EEEEEEec-CccccccC--CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEE
Confidence 55555543 22111111 1223456666677776665 688899999999988776666665444 39
Q ss_pred EEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe--------------------CCeeeeeCCCceEEEeeccEEEEEEe
Q psy14886 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH--------------------GPSYYEQLPPKITIAAHRNLQLRCSA 204 (505)
Q Consensus 145 ~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~ 204 (505)
.|.++..+|+|.|+|.|.|..|.....+.+.+.. .|.+....+....+..|+.+.|.|.+
T Consensus 167 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~ 246 (317)
T 2y25_A 167 QINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV 246 (317)
T ss_dssp EEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEE
T ss_pred EECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEE
Confidence 9999999999999999999988887777766531 24444444556788899999999999
Q ss_pred eecCCCCeEEEEEeCCEEecCCCCCcccCCeeeec---CCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 205 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
.+.|.+ .+.|++++..+..... ...... ...|.|..+..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 247 ~g~p~p--~i~W~~~g~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 247 WGDPPP--EVSWLKNEKALASDDH-----CNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp ECSSCC--EEEEEESSSEECCCSS-----EEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ecCCCC--EEEEEECCEeCCCCCc-----EEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 988765 5679999988865321 111111 13899999999999999999999999999999998874
No 31
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.98 E-value=4e-31 Score=240.16 Aligned_cols=275 Identities=15% Similarity=0.197 Sum_probs=199.6
Q ss_pred CCceEEEeeccEEEEEEeeec-----CCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEE
Q psy14886 187 PPKITIAAHRNLQLRCSAHTE-----ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 261 (505)
Q Consensus 187 ~~~~~~~~g~~~~l~C~~~~~-----~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 261 (505)
+....+..|+.++|.|.+.+. ..+...+.|.++|..+..... .......+.|.|.++... .|.|+|.|.
T Consensus 11 P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~~~-----~~~~~~~~~L~i~~~~~~-~g~Y~C~a~ 84 (303)
T 1i1r_A 11 PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQY-----TIINRTASSVTFTDIASL-NIQLTCNIL 84 (303)
T ss_dssp SSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGGGC-----EEEETTEEEEEECSCCCS-EEEEEEEEE
T ss_pred cCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChhhe-----eeeCCcEEEEEEcCcCCC-ceEEEEecc
Confidence 456778999999999999864 123345679999988754211 111112347999999877 599999998
Q ss_pred ecCCcE---EEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeee
Q psy14886 262 STVGKI---STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 338 (505)
Q Consensus 262 n~~g~~---~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~ 338 (505)
+. |.. ...+.+.+..+|.+|.++.+.....+++.|+|.++.+.+. +.+|.|+|+......|.-..
T Consensus 85 ~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~-~~~Y~v~~~~~~~~~~~~~~---------- 152 (303)
T 1i1r_A 85 TF-GQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKA---------- 152 (303)
T ss_dssp ET-TTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEEC----------
T ss_pred cC-CCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCCC-CcCEEEEEEecCCCCccCCC----------
Confidence 74 432 2345677888999999999988888999999999887654 57999999876433222111
Q ss_pred ecC-ceeeEEeeec-cCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeecc--ccccEEEEEEeCCccc
Q psy14886 339 YTG-RKEASIENVL-VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG--KIGDLSISWEPLPREK 414 (505)
Q Consensus 339 ~~~-~~~~~~~~~L-~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~--~~~~v~l~W~~~~~~~ 414 (505)
... ...+.+.+ | .+++.|.|+|.|.|..|.+.++.. .+.+....++.||.++.+... +.+++.|+|++ +..
T Consensus 153 ~~~~~~~~~i~~-L~~p~t~Y~f~V~A~N~~G~~~s~~~--~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~--p~~ 227 (303)
T 1i1r_A 153 KRDTPTSCTVDY-STVYFVNIEVWVEAENALGKVTSDHI--NFDPVYKVKPNPPHNLSVINSEELSSILKLTWTN--PSI 227 (303)
T ss_dssp CSSCTTEEECSS-CCCTTSCEEEEEEEEETTEEEECCCE--EECGGGGEECCCCEEEEEECCSSSSSCEEEEEEC--CGG
T ss_pred cCCCceEEEECC-cCcccccEEEEEEEEcCCCCcccCCE--EECHHHeEecCCCcceEEEEecCCCCEEEEEECC--CCC
Confidence 112 23444444 9 899999999999999999864332 333444467789999988643 67899999998 345
Q ss_pred cCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCc---eEEEeec
Q psy14886 415 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE---VVTIWHD 485 (505)
Q Consensus 415 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~---~~~~~t~ 485 (505)
.++++++|.|+|+..+...|....... .......+.|.+|.|++.|.|+|+|+|.+|.|++|+ .+.+.|.
T Consensus 228 ~~~~i~~Y~v~y~~~~~~~w~~~~~~~-~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~ 300 (303)
T 1i1r_A 228 KSVIILKYNIQYRTKDASTWSQIPPED-TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY 300 (303)
T ss_dssp GGTSCEEEEEEEEETTCSSCEECCGGG-GCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECC
T ss_pred CCcccEEEEEEEEeCCCCCceEEcccc-CCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCC
Confidence 678999999999999877887543211 012345789999999999999999999999988765 4445553
No 32
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.98 E-value=1.1e-30 Score=253.96 Aligned_cols=253 Identities=13% Similarity=0.152 Sum_probs=182.3
Q ss_pred CCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEee-EEE
Q psy14886 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS-AQL 81 (505)
Q Consensus 3 ~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l 81 (505)
.|+.+.|.|.+.|.|.+.|+|++++..+... .......-......+. .+|+|.|+|.|.|..|..... +.|
T Consensus 153 ~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~d~G~Y~C~A~N~~G~~~~~~~~l 224 (527)
T 3qs9_E 153 MENQDALVCISESVPEPIVEWVLCDSQGESC-------KEESPAVVKKEEKVLH-ELFGTDIRCCARNELGRECTRLFTI 224 (527)
T ss_dssp CSSSSCEEEEEEESSCCEEEEEEC--------------------CEEECCSEEC-CCCSSCEEEEEECSSCEEEEECEEE
T ss_pred cCCceEEEEEEceecCCeEEEEECCCCCccc-------cccCCcEEEEeeeecc-ccCCEEEEEEEEeCCCcccceEEEE
Confidence 5778899999999999999999998765421 0000011111223345 789999999999998887654 667
Q ss_pred EEEecCCCccCCCCCceEEeeCCCeEEEEeecC-CCCCCeEEEEECCEEecCCCcEE---------EeeCCCEEEcCCCC
Q psy14886 82 RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRK---------IFENGNLLISPVSR 151 (505)
Q Consensus 82 ~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~---------~~~~~~l~i~~v~~ 151 (505)
.|.. +|.+ . +....+.+|+.+.|.|.+. +.|.+.+.|+++|..+....... ....++|.|.++..
T Consensus 225 ~V~~-~p~~--~--p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 299 (527)
T 3qs9_E 225 DLNQ-TPQT--T--LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVAR 299 (527)
T ss_dssp ESSS-CCCC--S--CCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCG
T ss_pred EEec-cCcc--C--CCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCc
Confidence 7764 4444 2 2467789999999999996 88999999999998775432221 11234599999999
Q ss_pred CCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeC-CCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc
Q psy14886 152 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 230 (505)
+|+|.|+|.|.|. ....+.|.|..+|.+.... .....+..|+.+.|.|.+.+.|.| .+.|+++|..+.....
T Consensus 300 ~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p--~i~W~k~g~~l~~~~~-- 372 (527)
T 3qs9_E 300 NDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI--RCTWTFSRKSFPCEQK-- 372 (527)
T ss_dssp GGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCC--EEEEEETTEEEECBCC--
T ss_pred ccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCC--EEEEEECCEECcCCcc--
Confidence 9999999999987 5666788887766543322 123556789999999999999876 4679999998865321
Q ss_pred ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCC
Q psy14886 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 280 (505)
Q Consensus 231 ~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~ 280 (505)
.......|.|..+..+|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 373 -----~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~ 417 (527)
T 3qs9_E 373 -----GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQ 417 (527)
T ss_dssp -----BCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCE
T ss_pred -----cccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCe
Confidence 122456899999999999999999999999998899999987663
No 33
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.98 E-value=1.5e-30 Score=252.86 Aligned_cols=336 Identities=13% Similarity=0.083 Sum_probs=209.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|++++|.|.+.+.|...+.|++++..+..... +....|. ..+|.|.+++ .+|+|.|+|.+.|..+.....+.
T Consensus 60 v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~-~~~~~r~---~~SL~I~~v~-~~D~G~Y~C~~~n~~~~~~~~~~ 134 (527)
T 3qs9_E 60 VDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPH-FDLQNRG---VVSMVILKMT-ETQAGEYLLFIQSEATNYTILFT 134 (527)
T ss_dssp ECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCB-C-----C---EEEEEESSCC-SSSCSEEEEEEEC--CEEEEEEE
T ss_pred EeccccEEEEEEEecCCceeEEEEecCCccCcccc-cCCCcce---EEEEEECcCC-hhhCeeEEEEEEeccccEEEEEE
Confidence 57999999999998878899999999997653211 1111111 1259999999 99999999999998776655555
Q ss_pred EEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCE--EEcCCCCCCCEEEE
Q psy14886 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNL--LISPVSRDDSGIYS 158 (505)
Q Consensus 81 l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l--~i~~v~~~d~G~y~ 158 (505)
|.|. |.+...+ ........|+.+.|.|.+.|.|.|.|.|++++..+.... ......+ ....+...|+|.|+
T Consensus 135 v~v~---~~~~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~G~Y~ 207 (527)
T 3qs9_E 135 VSIR---NTLLYTL-RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCK---EESPAVVKKEEKVLHELFGTDIR 207 (527)
T ss_dssp EEEC--------CE-EEEEEEECSSSSCEEEEEEESSCCEEEEEEC----------------CEEECCSEECCCCSSCEE
T ss_pred EEEC---Cceeecc-CCCcEEecCCceEEEEEEceecCCeEEEEECCCCCcccc---ccCCcEEEEeeeeccccCCEEEE
Confidence 5554 2222222 122334567788999999999999999999887653211 1111111 12234578999999
Q ss_pred EEEEcCCCceeee-EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEee-ecCCCCeEEEEEeCCEEecCCCCCc---ccC
Q psy14886 159 CTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNE---LET 233 (505)
Q Consensus 159 C~~~~~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~~~w~~~~~~~~~~~~~~---~~~ 233 (505)
|.|.|..|..... +.|.|...|.. .+....+..|+.+.|.|.+. +.|.+ .+.|++++..+....... ...
T Consensus 208 C~A~N~~G~~~~~~~~l~V~~~p~~---~p~~~~v~~G~~v~L~C~~~~g~p~p--~i~W~k~g~~l~~~~~~~~~~~~~ 282 (527)
T 3qs9_E 208 CCARNELGRECTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGF--GLTWELENKALEEGNYFEMSTYST 282 (527)
T ss_dssp EEEECSSCEEEEECEEEESSSCCCC---SCCEEEECTTSCEEEEEEEEESSSCC--CEEEECSSSCCCGGGEEEEEEEET
T ss_pred EEEEeCCCcccceEEEEEEeccCcc---CCCceEEeCCCeEEEEEEEccCCCCe--EEEEEECCEECCCCceeeeeeecc
Confidence 9999999987665 67777655554 34567788999999999997 66655 566999987664321000 000
Q ss_pred CeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCC---CCceEEEEEeCCeEEEEeecCCCCCCCCc
Q psy14886 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPIT 310 (505)
Q Consensus 234 ~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~---p~~~~~~~~~~~~v~l~w~~~~~~~~~i~ 310 (505)
.........|.|..+..+|+|.|+|.|.|. ....+.|.|..+|.. +.........+..+.|.
T Consensus 283 ~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~------------ 347 (527)
T 3qs9_E 283 NRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFS------------ 347 (527)
T ss_dssp TTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEE------------
T ss_pred CcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEE------------
Confidence 111122346999999999999999999987 667778888765521 11111112223344444
Q ss_pred eEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 311 ~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
|.+...+.....|......+..... .......+.+.+ +...+.+.|+|.|.|..|...
T Consensus 348 -C~~~g~P~p~i~W~k~g~~l~~~~~-~~~~~~~L~I~~-v~~~D~G~YtC~A~N~~g~~~ 405 (527)
T 3qs9_E 348 -VRFKAYPQIRCTWTFSRKSFPCEQK-GLDNGYSISKFC-NHKHQPGEYIFHAENDDAQFT 405 (527)
T ss_dssp -EEEEEESCCEEEEEETTEEEECBCC-BCSSSSEEEEEC-CCTTCCSCEEEEEEETTEEEE
T ss_pred -EEEEecCCCEEEEEECCEECcCCcc-cccCCcEEEEec-CCcccCEEEEEEEEeCCCcEE
Confidence 4444444444556554333321111 111233445555 999999999999999999764
No 34
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.98 E-value=7.2e-31 Score=247.02 Aligned_cols=256 Identities=25% Similarity=0.440 Sum_probs=197.2
Q ss_pred CCCCceEEEEEEe-ccCCCeEEEEECCEECcCCCCCCCCCCcEEE-ECCeEEEEcCCCCCCCeEEEEEEEcccCceEe--
Q psy14886 2 DNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-- 77 (505)
Q Consensus 2 ~~G~~~~l~C~~~-~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~-- 77 (505)
.+|+.+.|.|.+. +.|.+.+.|++++.++.. ...++.. .+++|.|.+++ .+|+|.|+|.|.|..+....
T Consensus 115 ~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~------~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~n~~~~~~~~~ 187 (384)
T 3kld_A 115 RRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQ------DNRRFVSQETGNLYIAKVE-KSDVGNYTCVVTNTVTNHKVLG 187 (384)
T ss_dssp EETCCEEECCCCCSEESCEEEEEEETTEECCC------SSSEEECTTTCCEEESSCC-GGGCEEEEEEEEETTTTEEEEC
T ss_pred EcCCCeEEecCCCCCCCCeEEEEEECCCCCEe------eccEEEEcCCCcEEEeecC-HHHCceEEEEEecccccceeeC
Confidence 5799999999764 456789999999998752 2223322 45789999999 99999999999998765432
Q ss_pred -eEEEEEEe------cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEEC-CEEecCCCcEEEeeCCCEEEcCC
Q psy14886 78 -SAQLRVLT------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD-GNIIGSGGRRKIFENGNLLISPV 149 (505)
Q Consensus 78 -~~~l~v~~------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~-g~~~~~~~~~~~~~~~~l~i~~v 149 (505)
...+.+.. .+|.+.... +....+.+|+++.|.|.+.|.|.+.+.|+++ +..+... ......++.|.|.++
T Consensus 188 ~~~~~~v~~~~~~~~~~p~~~~~~-~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~-~~~~~~~~~L~I~~v 265 (384)
T 3kld_A 188 PPTPLILRNDGVMGEYEPKIEVQF-PETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK-ARRHKSNGILEIPNF 265 (384)
T ss_dssp CCEEEEEEEEEECCCEEEEEEEEC-CSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT-CEECTTSCEEEECSC
T ss_pred CceEEEEccCCcccccCCceeecC-CCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc-ceecCCCcEEEECCC
Confidence 12222221 122222221 2456688999999999999999999999994 4444432 222334567999999
Q ss_pred CCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCC
Q psy14886 150 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 229 (505)
Q Consensus 150 ~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~ 229 (505)
..+|+|.|+|.|.|..|.......|.|..+|.+... +....+..|+.+.|.|.+.+.|.| .+.|+++|..+....
T Consensus 266 ~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~-~~~~~v~~g~~v~l~C~~~g~P~p--~i~W~k~g~~l~~~~-- 340 (384)
T 3kld_A 266 QQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQI-INDIHVAMEESVFWECKANGRPKP--TYRWLKNGDPLLTRD-- 340 (384)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEC-CCCEEECTTCCEEEECEEEEESCC--EEEEEETTEECCCBT--
T ss_pred ChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccC-CCceEecCCCCEEEEeECCccCCC--eEEEEECCEECCCCc--
Confidence 999999999999999999888899999887776543 456778899999999999998876 566999999886532
Q ss_pred cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 230 ~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
.....++.|.|..+..+|.|.|+|.|.|..|....+..|.|.
T Consensus 341 -----~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 341 -----RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp -----TEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred -----cEEEeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 233456789999999999999999999999999999988885
No 35
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.98 E-value=7.2e-31 Score=245.33 Aligned_cols=310 Identities=15% Similarity=0.135 Sum_probs=212.0
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCC-------CCCCCCCcEEEE-------CCeEEEEcCCCCCCCeEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSET-------LPLEDQDRYFIQ-------DNVLTIRYLNPERDPAMYQC 66 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~-------~~~~~~~~~~~~-------~~~L~i~~~~~~~d~G~Y~C 66 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+.... .......|+.+. ..+|.|.+++ .+|+|.|+|
T Consensus 6 ~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C 84 (363)
T 1wio_A 6 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLK-IEDSDTYIC 84 (363)
T ss_dssp EETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCC-GGGCEEEEE
T ss_pred EeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCC-HHHCEEEEE
Confidence 4689999999999988899999999985321100 000123455442 5679999999 999999999
Q ss_pred EEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEE
Q psy14886 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 146 (505)
Q Consensus 67 ~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i 146 (505)
.+.|.. ..+.|.|... ...+ ...+.+|+++.|.|.+.+.|.+.+.|+++|..+ ......|.|
T Consensus 85 ~~~n~~----~~~~l~V~~~----~~~~---~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-------~~~~~~L~i 146 (363)
T 1wio_A 85 EVEDQK----EEVQLLVFGL----TANS---DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGGKTLSV 146 (363)
T ss_dssp EETTEE----EEEEEEEEEE----EESS---CSSEESBSCEEEEEECCTTCCCCEEEECSSSCE-------EEESSEEEE
T ss_pred EEEECC----CcEEEEEEeC----CCCC---ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc-------cccceEEEE
Confidence 998763 2556666642 1222 124789999999999999999999999987543 234667999
Q ss_pred cCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecC---CCCeEEEEEeCCEEe
Q psy14886 147 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE---LLDVAYIWTHNGVRI 223 (505)
Q Consensus 147 ~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~---~~~~~~~w~~~~~~~ 223 (505)
.++..+|+|.|+|.|.+..+.....+.+.|...|... ....+..|+.+.|.|.+.+.+ .|...+.|+++|..+
T Consensus 147 ~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~----~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~ 222 (363)
T 1wio_A 147 SQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS----SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASS 222 (363)
T ss_dssp CSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE----EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCC
T ss_pred eeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC----CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCc
Confidence 9999999999999999987776667778776555432 345677899999999887732 234577899988776
Q ss_pred cCCCCCcc-cCCeeee------------c--CCeEEEecCCCCCCEEEEEEEEec--CCcEEEEEEEEEcCCCCCCCceE
Q psy14886 224 GNMDLNEL-ETPNINI------------D--GGLLEITNASFADAGEYECVVKST--VGKISTKTTVIVEGPPGLPGGVQ 286 (505)
Q Consensus 224 ~~~~~~~~-~~~~~~~------------~--~~~l~i~~~~~~~~g~y~C~~~n~--~g~~~~~~~l~v~~~p~~p~~~~ 286 (505)
........ ....... . ...|.|..+..+|.|.|+|.|.|. .|.....+.|.|...++.+..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~~~l~ 302 (363)
T 1wio_A 223 SKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLT 302 (363)
T ss_dssp CCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEECCCSSSEE
T ss_pred cceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEecCCCeeEE
Confidence 54200000 0011111 2 348999999999999999999999 99988888888875443333333
Q ss_pred EEEEeCC--eEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEE
Q psy14886 287 VVEVHKT--SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364 (505)
Q Consensus 287 ~~~~~~~--~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~ 364 (505)
+...+.. .+.+.|. .....+. ......+.. +.+.+.+.|+|.|.
T Consensus 303 C~~~g~p~p~~~i~W~-------------------------~~~~~~~--------~~~~l~i~~-v~~~d~G~Y~C~a~ 348 (363)
T 1wio_A 303 CEVWGPTSPKLMLSLK-------------------------LENKEAK--------VSKREKAVW-VLNPEAGMWQCLLS 348 (363)
T ss_dssp EEEESSCCTTCCEEEE-------------------------CSSSSCS--------EEESSSEEE-ESSCCSEEEEEEEC
T ss_pred EEEccccCCCccEEEE-------------------------eCCCcee--------eeeeeeeee-eccccceeEEEEEe
Confidence 3332221 1223443 1111111 011233444 88999999999999
Q ss_pred cCC
Q psy14886 365 NEL 367 (505)
Q Consensus 365 n~~ 367 (505)
|..
T Consensus 349 ~~~ 351 (363)
T 1wio_A 349 DSG 351 (363)
T ss_dssp SSS
T ss_pred cCC
Confidence 754
No 36
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=2.4e-29 Score=247.10 Aligned_cols=294 Identities=17% Similarity=0.239 Sum_probs=193.1
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EECc---CC--CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELLN---SE--TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l~---~~--~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
|.+|++++|.|.+.+.|.+.+.|+|++ ..+. .. .......+|+... ..+|.|.+++ .+|+|.|+|.+.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~ 90 (523)
T 2rcj_C 12 GTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLE-AEDESDYYCASW 90 (523)
T ss_pred EecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCC-hhhCEEEEEEEc
Confidence 468999999999998888999999974 2111 00 0001123566543 2379999999 999999999999
Q ss_pred cccCce---EeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCC--eEEEEECCEEecCCCcEEE---
Q psy14886 70 NQLKTR---YSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKI--- 138 (505)
Q Consensus 70 ~~~~~~---~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~--~i~W~~~g~~~~~~~~~~~--- 138 (505)
|..|.. ...+.|.|.. .+|.+...+ ....+.+|+.+.|.|.+.|.|++ .+.|+++|..+..+.....
T Consensus 91 n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~--~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 168 (523)
T 2rcj_C 91 NSSDNSYVFGTGTKVTVLGQPKANPTVTLFP--PSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSK 168 (523)
T ss_pred cCCCccccccCceEEEeccCCCcCCeEEecC--CcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccc
Confidence 876532 2346777742 245444443 22345689999999999988654 9999999988764322211
Q ss_pred eeC------CCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEE----eCCeeeeeCCCceEEEeeccEEEEEEeeec-
Q psy14886 139 FEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTE- 207 (505)
Q Consensus 139 ~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~- 207 (505)
..+ ..|.|.++..+|+|.|+|.|.|..+.....+.+.+. .+|.+. ...+...+..|+.+.|.|.+.+.
T Consensus 169 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~-~~~~~~~~~~G~~~~l~C~~~g~~ 247 (523)
T 2rcj_C 169 QSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVF-PLAPSSKSTSGGTAALGCLVKDYF 247 (523)
T ss_pred cCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEE-ecCCCcccccCCceEEEEEEecee
Confidence 112 248999999999999999999998876665554321 233333 22333456789999999999887
Q ss_pred CCCCeEEEEEeCCEEecCCCCCccc-CCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCC----CC
Q psy14886 208 ELLDVAYIWTHNGVRIGNMDLNELE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG----LP 282 (505)
Q Consensus 208 ~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~----~p 282 (505)
|.| +.+.|++++..+......... ........+.|.|..+..+| |.|+|.|.|..|.......+.+...|. +|
T Consensus 248 P~p-~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p 325 (523)
T 2rcj_C 248 PQP-VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPP 325 (523)
T ss_pred CCC-eEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCC
Confidence 433 478899998765321110000 00011113479999999999 999999999999876666665543332 11
Q ss_pred CceEEEEEeCCeEEEEeec
Q psy14886 283 GGVQVVEVHKTSATIQWTD 301 (505)
Q Consensus 283 ~~~~~~~~~~~~v~l~w~~ 301 (505)
. .......+..+.|.|..
T Consensus 326 ~-~~~~v~~g~~~~l~C~~ 343 (523)
T 2rcj_C 326 K-PKDTLMISRTPEVTCVV 343 (523)
T ss_pred C-chhhcccCCceEEEEEE
Confidence 1 00012346678888874
No 37
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=1.1e-30 Score=236.14 Aligned_cols=256 Identities=15% Similarity=0.112 Sum_probs=190.0
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|++++|.|.+.+ .+.|+|++..+. .....+++|.|.+++ .+|+|.|+|.+.| |. ...+.
T Consensus 24 v~~G~~v~l~C~~~~----~i~W~~~~~~~~----------~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n--g~-~~~~~ 85 (290)
T 2o26_X 24 VEAGDTLSLTCIDPD----FVRWTFKTYFNE----------MVENKKNEWIQEKAE-ATRTGTYTCSNSN--GL-TSSIY 85 (290)
T ss_dssp EETTSCEEEEEECTT----EEEEEEECSSSC----------EEEECSSEEEETTCC-GGGCEEEEEEESS--SC-EEEEE
T ss_pred EcCCCcEEEEECCCC----cEEEecCCccee----------eecCCCceEEEeccC-HHhCeEEEEEeeC--Cc-cEEEE
Confidence 468999999999987 899999987661 112234899999999 9999999999998 43 56778
Q ss_pred EEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCC-CeEEEE-ECCEEecCCCcEEEeeCCCEEEcCCCCCCCE-EE
Q psy14886 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK-PKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSG-IY 157 (505)
Q Consensus 81 l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~-~~i~W~-~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G-~y 157 (505)
|.|.. +|.+... .....+.+|+.+.|.|.+.+ |. +.+.|+ ++|..+..+.++....++.|.|.++..+|+| .|
T Consensus 86 l~V~~-~~~~~~~--~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y 161 (290)
T 2o26_X 86 VFVRD-PAKLFLV--GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCV 161 (290)
T ss_dssp EEEEC-SSCCBCC--CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEE
T ss_pred EEEeC-CCccccc--ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEE
Confidence 88885 4544433 34577889999999999986 77 899994 6888887766666666778999999999999 99
Q ss_pred EEEEEcCCCceee-eEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEe----cCCCCC
Q psy14886 158 SCTATNVHGMDES-KGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI----GNMDLN 229 (505)
Q Consensus 158 ~C~~~~~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~----~~~~~~ 229 (505)
+|.|.|..+.... .+.|.|.. .++.+...+....+..|+.+.|.|.+.+.|.+. .+.|++++..+ ......
T Consensus 162 ~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~-~i~W~~~~~~~~~~~~~~~~~ 240 (290)
T 2o26_X 162 RCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSV-NSMWLKMNPQPQHIAQVKHNS 240 (290)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTC-EEEEEEESSSEEECCCEECCE
T ss_pred EEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcce-eEEEecCCCCCccceeecccc
Confidence 9999998555433 47777762 233333344555788999999999999887653 46799887653 111100
Q ss_pred cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 230 ~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
.............|.|..+..+|.|.|+|.|.|..|..+..+.|.|..+|
T Consensus 241 ~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 241 WHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp EEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred cccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 00000012234689999999999999999999999999988888887654
No 38
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.97 E-value=6.3e-30 Score=242.99 Aligned_cols=263 Identities=23% Similarity=0.351 Sum_probs=205.9
Q ss_pred CCCCCceEEEEEE-eccCCCeEEEEECCEECcCCCCCCCCCCcEEE-ECCeEEEEcCCCCCC-CeEEEEEEEcccCceEe
Q psy14886 1 MDNQADLTWTCEA-FGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERD-PAMYQCRAKNQLKTRYS 77 (505)
Q Consensus 1 v~~G~~~~l~C~~-~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~~~d-~G~Y~C~~~~~~~~~~~ 77 (505)
+.+|+.++|.|.+ .+.|.+.+.|++++..... ...++.. .+++|.|.+++ .+| +|.|+|.+.|..+....
T Consensus 128 v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~------~~~~~~~~~~~~l~i~~v~-~~d~~G~Y~C~a~n~~~~~~~ 200 (404)
T 3p3y_A 128 VQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPIT------QDKRVSQGHNGDLYFSNVM-LQDMQTDYSCNARFHFTHTIQ 200 (404)
T ss_dssp EETTSCEEECCCCCCCSSCCEEEEECTTSCBCC------CCSSEEECTTSCEEESSCC-SGGGSSCBEEEEECTTTCCEE
T ss_pred EccCCcEEEEeCCCCCCCCCeEEEeCCCccccC------CCCcEEEcCCCcEEEEeee-eccCCcceEEEEEecccccee
Confidence 3589999999999 6788999999998754331 2344544 46789999999 999 59999999988765322
Q ss_pred ---eEEEEEEec------CCCccCCC-CCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEc
Q psy14886 78 ---SAQLRVLTL------KPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147 (505)
Q Consensus 78 ---~~~l~v~~~------~p~~~~~~-~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~ 147 (505)
.+.+.|... +|.+.... ......+.+|+.+.|.|.+.+.|.+.+.|+++|..+..........++.|.|.
T Consensus 201 ~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~ 280 (404)
T 3p3y_A 201 QKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRIT 280 (404)
T ss_dssp ECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEES
T ss_pred ccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEc
Confidence 355566531 23222221 12345688999999999999999999999999998876655444556789999
Q ss_pred CCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCC
Q psy14886 148 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~ 227 (505)
++..+|+|.|+|.|.|..|.....+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|+++|..+....
T Consensus 281 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p--~v~W~~~g~~~~~~~ 357 (404)
T 3p3y_A 281 NVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLD-EPKNLILAPGEDGRLVCRANGNPKP--TVQWMVNGEPLQSAP 357 (404)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEE-CCCCEEECTTCCEEEECEEEEESCC--EEEEEETTEEGGGSC
T ss_pred cCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeec-cCCcceeecCCcEEEEEEccccCCC--ceEEEECCEecCCCC
Confidence 9999999999999999999988889999987776554 4556778899999999999998766 567999999886532
Q ss_pred CCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 228 ~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
. .......+..|.|..+..+|.|.|+|.|.|..|.....+.|.|.+
T Consensus 358 ~----~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 358 P----NPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp C----CTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred C----CceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 1 123334567899999999999999999999999999999888754
No 39
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=1.5e-30 Score=242.01 Aligned_cols=274 Identities=19% Similarity=0.229 Sum_probs=170.1
Q ss_pred CCCCCceEEEEEEeccC-----------CCeEEEEECCEECcCCC-CC-CCCCCcEEEECCeEEEEcCCCCCCCeEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVP-----------DVTYSWFRNGELLNSET-LP-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCR 67 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-----------~~~~~W~~~~~~l~~~~-~~-~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~ 67 (505)
|.+|+.++|.|.+.+.| .+.+.|+|++....... +. .....++...+++|.|.+++ .+|+|.|+|.
T Consensus 19 v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~-~~D~G~Y~C~ 97 (349)
T 4dep_C 19 VFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTL-LNDTGNYTCM 97 (349)
T ss_dssp EETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCC-GGGCEEEEEE
T ss_pred EecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCC-hhhCEEEEEE
Confidence 45899999999998755 49999999884211000 00 01345677788999999999 9999999999
Q ss_pred EEcccCceEeeEEEEEEecCCCccCCC--CCceEEeeCCCeEEEEeec-----CCCCCCeEEEEECCEEecCCCcEEEee
Q psy14886 68 AKNQLKTRYSSAQLRVLTLKPSFKKRP--LESETYAGEGGNVTIFCNP-----EAAPKPKFVWKKDGNIIGSGGRRKIFE 140 (505)
Q Consensus 68 ~~~~~~~~~~~~~l~v~~~~p~~~~~~--~~~~~~v~~g~~v~l~C~~-----~~~p~~~i~W~~~g~~~~~~~~~~~~~ 140 (505)
+.|..+.....+.|.|.. ++...... .+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+....++ ...
T Consensus 98 a~n~~~~~~~~~~l~V~~-~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~-~~~ 175 (349)
T 4dep_C 98 LRNTTYCSKVAFPLEVVQ-KDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNV-IPE 175 (349)
T ss_dssp EECSSCEEEEEEEEEEEC-CCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSE-EEE
T ss_pred EecCCceEEEEEEEEEec-CCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccce-eec
Confidence 999888888888899886 33322221 1234578899999999985 67789999999999988654332 233
Q ss_pred CCCEEEcCCCCCCCEEEEEEEEcCC-Cce---eeeEEEEEEeC-----CeeeeeCCC-c-eEEEeeccEEEEEEeeec--
Q psy14886 141 NGNLLISPVSRDDSGIYSCTATNVH-GMD---ESKGRLIVLHG-----PSYYEQLPP-K-ITIAAHRNLQLRCSAHTE-- 207 (505)
Q Consensus 141 ~~~l~i~~v~~~d~G~y~C~~~~~~-g~~---~~~~~l~v~~~-----p~~~~~~~~-~-~~~~~g~~~~l~C~~~~~-- 207 (505)
...|.|.++..+|+|.|+|.|.|.. |.. ...+.|.|..+ ++.+..... . ..+..|+.+.|.|.+.+.
T Consensus 176 ~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~ 255 (349)
T 4dep_C 176 GMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFL 255 (349)
T ss_dssp TTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCC
T ss_pred CCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccC
Confidence 4569999999999999999999987 443 45566777653 232222222 1 267889999999999964
Q ss_pred CCCCeEEEEEeCCEEecCC--CCCcccC-----CeeeecCCeEEEecCCCCCC-EEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 208 ELLDVAYIWTHNGVRIGNM--DLNELET-----PNINIDGGLLEITNASFADA-GEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 208 ~~~~~~~~w~~~~~~~~~~--~~~~~~~-----~~~~~~~~~l~i~~~~~~~~-g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
..|...+.|++++..+... ....... .........|.|..+..+|. |.|+|.|.|..|.....+.|.|..
T Consensus 256 g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 256 MDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp TTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred CCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 1234577899998877541 1110000 00011234588999999999 999999999999999988888864
No 40
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=4.8e-30 Score=234.81 Aligned_cols=256 Identities=19% Similarity=0.291 Sum_probs=191.4
Q ss_pred CCCCCceEEEEEEe-ccCCCeEEEEECCEECcCCCCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~-~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
|.+|++++|.|... +.|.+.++|+|++..+. ...++.+. + .+|.|.+++ .+|+|.|+|.+.|..|..
T Consensus 13 v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~-------~~~~~~~~~~~~~~~L~I~~~~-~~D~G~Y~C~~~n~~g~~ 84 (312)
T 2y23_A 13 VDDDGVISLNFECDKMTPKSEFSWSKDYVSTE-------DSPRLEVESKGNKTKMTFKDLG-MDDLGIYSCDVTDTDGIA 84 (312)
T ss_dssp ECTTCCEEEEEECSSCCTTCCEEEEETTEECT-------TCTTEEEEEETTEEEEEESSCC-GGGCEEEEEEESSSCCCC
T ss_pred EecCCeEEEEEEEeCCCCCcEEEEEECCEECC-------CCCCEEEEEeCCEEEEEECcCC-ccCCEEEEEEEEeCCCcE
Confidence 46899999999986 47889999999999987 34566553 2 589999999 999999999999987754
Q ss_pred EeeEEEEEEe-----------cCCCccCCCCCceEEeeCCCeEEEEeecC-CCCCCeEEEEECCEEecCCCcEEEeeCCC
Q psy14886 76 YSSAQLRVLT-----------LKPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIFENGN 143 (505)
Q Consensus 76 ~~~~~l~v~~-----------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~~~ 143 (505)
. +..+.|.. .+|.+...+ .....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+..+..
T Consensus 85 ~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~ 162 (312)
T 2y23_A 85 S-SYLIDEEELKRLLALSHEHKFPTVPVKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRN 162 (312)
T ss_dssp E-EEEECHHHHHHHHHHHHHHHSCBCCEEE-EEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETT
T ss_pred E-EEEEEEeeeeeeecccccCCCCcccccc-CCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccC
Confidence 3 44555432 045444432 1267789999999999998 78999999999999998776666654432
Q ss_pred -----EEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEE---------------------eCCeeeeeCCCceEEEeecc
Q psy14886 144 -----LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL---------------------HGPSYYEQLPPKITIAAHRN 197 (505)
Q Consensus 144 -----l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~---------------------~~p~~~~~~~~~~~~~~g~~ 197 (505)
|.|.++..+|+|.|+|.+.+..+.... .+.+. .+|.+... ....+..|+.
T Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~v~~G~~ 238 (312)
T 2y23_A 163 TGIIEMFMEKLQDEDEGTYTFQLQDGKATNHS--TVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY--LSWEVTGECN 238 (312)
T ss_dssp TTEEEEEESCCCGGGCEEEEEEEESSSCEEEE--EEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE--EEEEEETTTE
T ss_pred CCEEEEEEccCCcccCEeEEEEEEeCCceEEE--EEEEcchhhhhhcccccccccchhhccCCceeec--ceEEEeCCCE
Confidence 999999999999999999865443333 33321 12333321 1356789999
Q ss_pred EEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 198 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 198 ~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
+.|.|.+.+.|.+ ..+.|++++..+..... .........|.|.++..+|.|.|+|.|.|..|.....+.|.+.
T Consensus 239 ~~l~C~~~~~p~~-~~v~W~~~g~~~~~~~~-----~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 239 VLLKCKVANIKKE-THIVWYKDEREISVDEK-----HDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EEEEEEEESCCSS-CEEEEEETTEEEEEECC-----C----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EEEEEEEcCCCCC-CEEEEeeCCEECCCCCc-----EEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 9999999998765 25779999998864221 1111223589999999999999999999999999988887653
No 41
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.97 E-value=9.9e-29 Score=246.30 Aligned_cols=356 Identities=18% Similarity=0.219 Sum_probs=230.4
Q ss_pred CCCCCceEEEEEEecc-CCCeEEEEECCEECcCC-----C-CCCCCCCcEEE--ECC-----eEEEEcCCCCCCCeEEEE
Q psy14886 1 MDNQADLTWTCEAFGV-PDVTYSWFRNGELLNSE-----T-LPLEDQDRYFI--QDN-----VLTIRYLNPERDPAMYQC 66 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~-p~~~~~W~~~~~~l~~~-----~-~~~~~~~~~~~--~~~-----~L~i~~~~~~~d~G~Y~C 66 (505)
+.+|++++|.|.+.+. |.+.+.|+|++..+... . ......+++.+ .+. +|.|.+++ .+|+|.|+|
T Consensus 124 v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C 202 (585)
T 2ocw_A 124 VDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLR-LSDAGQYLC 202 (585)
T ss_pred EEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCC-hhHCeEEEE
Confidence 4689999999999864 46789999987542110 0 00001244443 222 79999999 999999999
Q ss_pred EEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCC-C-CeEEEE-ECCE----Eec--------
Q psy14886 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-K-PKFVWK-KDGN----IIG-------- 131 (505)
Q Consensus 67 ~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p-~-~~i~W~-~~g~----~~~-------- 131 (505)
.+.|..+.....+.|.|...+| ..+.+.+|+.+.|.|.+.+.+ . +.+.|+ ++|. .+.
T Consensus 203 ~a~n~~g~~~~~~~l~V~~~~p--------~~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~ 274 (585)
T 2ocw_A 203 QAGDDSNSNKKNADLQVLKPEP--------ELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPA 274 (585)
T ss_pred EeccCCccccceEEEEEccCCC--------ceeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcc
Confidence 9999888887788888875333 234578999999999974332 2 688997 7873 111
Q ss_pred CCCcEEEee---CC--CEEEcCCCCCCCEEEEEEEEcCCCcee-----eeEEEEEEeCCeeeeeCCCceEEEeeccEEEE
Q psy14886 132 SGGRRKIFE---NG--NLLISPVSRDDSGIYSCTATNVHGMDE-----SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 201 (505)
Q Consensus 132 ~~~~~~~~~---~~--~l~i~~v~~~d~G~y~C~~~~~~g~~~-----~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~ 201 (505)
...++.+.. ++ .|.|.++..+|+|.|+|.|.|. |... ..+.|.|..+|.+.. .+....+..|+.+.|.
T Consensus 275 ~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~-~~~~~~~~~G~~v~l~ 352 (585)
T 2ocw_A 275 FEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPR-SPTVVKGVAGSSVAVL 352 (585)
T ss_pred cCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEeccccccc-CCcceEEEeCCcEEEE
Confidence 123333332 34 6999999999999999999995 4433 667888877766543 3566778899999999
Q ss_pred EEeeecCCCCeEE--EEEe--CCE--EecCCCCC--cccCCeeee----cCC--eEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 202 CSAHTEELLDVAY--IWTH--NGV--RIGNMDLN--ELETPNINI----DGG--LLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 202 C~~~~~~~~~~~~--~w~~--~~~--~~~~~~~~--~~~~~~~~~----~~~--~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
|.+.+.|.+.+.+ .|++ +|. .+...... ......... .++ .|.|..+..+|.|.|+|.| |..|..
T Consensus 353 C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~ 431 (585)
T 2ocw_A 353 CPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLW 431 (585)
T ss_pred EecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCcc
Confidence 9999988887654 7998 776 43221000 000011111 123 3889999999999999999 888988
Q ss_pred EEEEEEEEcCC-CCCCCceEEEEEeCCeEEEEeecCCC-CCCCCceEEEEEEeCCCCCeEEeeeccccceeeee--cCc-
Q psy14886 268 STKTTVIVEGP-PGLPGGVQVVEVHKTSATIQWTDGAT-NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY--TGR- 342 (505)
Q Consensus 268 ~~~~~l~v~~~-p~~p~~~~~~~~~~~~v~l~w~~~~~-~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~--~~~- 342 (505)
...+.|.|... |............+..+.|.|..... .+.+...+.|. ..+...-... ........... .+.
T Consensus 432 ~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~--k~g~~~~~~~-~~~~~~~~~~~~~~~~~ 508 (585)
T 2ocw_A 432 RTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWN--NTGCQALPSQ-DEGPSKAFVNCDENSRL 508 (585)
T ss_pred ceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEe--ecCceeeecc-CCCCCcceEEecCcccE
Confidence 88888888653 33222233445677889999986422 13333333332 2211100000 00000000010 011
Q ss_pred eeeEEeeeccCCceeEEEEEEEcCCCcCCC
Q psy14886 343 KEASIENVLVPWSTYEFKVIAGNELGYGEP 372 (505)
Q Consensus 343 ~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~ 372 (505)
..+.+.+ +...+.+.|+|.|.|..|.+..
T Consensus 509 ~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~~ 537 (585)
T 2ocw_A 509 VSLTLNL-VTRADEGWYWCGVKQGHFYGET 537 (585)
T ss_pred EEEEECC-CCcccCeEEEEEeEeCCCccEE
Confidence 2444444 9999999999999999987653
No 42
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.97 E-value=2.2e-29 Score=229.61 Aligned_cols=276 Identities=14% Similarity=0.170 Sum_probs=198.9
Q ss_pred CceEEEeeccEEEEEEeeec--CC-CCeEEEEEeCCEEecCCCCCcccCCeeeecC---CeEEEecCCCCCCEEEEEEEE
Q psy14886 188 PKITIAAHRNLQLRCSAHTE--EL-LDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVK 261 (505)
Q Consensus 188 ~~~~~~~g~~~~l~C~~~~~--~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~~~g~y~C~~~ 261 (505)
....+..|++++|.|.+.+. +. +...+.|.++|..+..... .....+ +.|.|.++...|.|.|.|.+.
T Consensus 8 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~~~------~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~ 81 (313)
T 2d9q_B 8 SAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQ------QRLSDGTQESIITLPHLNHTQAFLSCSLNW 81 (313)
T ss_dssp SCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTCEE------CCCSSSCCCEEEEESCCCSSEEEEEEEEES
T ss_pred CCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCccce------EEEecCeEEEEEEEeccCCCccceEEeeec
Confidence 45567899999999999986 21 2345669999876643210 011111 579999999999999999987
Q ss_pred ecCCcEEEEEEEEEcCCCCCCCceEEEEEe-CCeEEEEeecCCCCCCCCceEEEEEEeCCC------CCeEEeeeccccc
Q psy14886 262 STVGKISTKTTVIVEGPPGLPGGVQVVEVH-KTSATIQWTDGATNGRPITHYKIIARTNWN------STWFNVSEHVIGK 334 (505)
Q Consensus 262 n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~-~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~------~~w~~~~~~~~~~ 334 (505)
+..+.....+.|.+..+|.+|.++.+.... .++++++|.++.+.+.+ ..|.|+|+.... ..|..+...
T Consensus 82 ~~~~~~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~-~~Y~l~~~~~~~~~~~~~~~~~~~~~~---- 156 (313)
T 2d9q_B 82 GNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLP-TSFTLKSFKSRGNCQTQGDSILDCVPK---- 156 (313)
T ss_dssp SSSEEEEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEECCTTSCSCCCCEEEECCC----
T ss_pred CCCceeEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCc-eeEEEEEEecCCCcccCCcccccCCCC----
Confidence 655555566788888999999999988774 68999999998876554 569999986542 234333211
Q ss_pred eeeeecCceeeEEe-eeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeecc------ccccEEEEE
Q psy14886 335 EVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG------KIGDLSISW 407 (505)
Q Consensus 335 ~~~~~~~~~~~~~~-~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~------~~~~v~l~W 407 (505)
.+.....+. .+|.+++.|.|+|.|.|..|.+. +... .+.+....++.||.++.+... ..+++.|+|
T Consensus 157 -----~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~-s~~~-~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W 229 (313)
T 2d9q_B 157 -----DGQSHCSIPRKHLLLYQNMGIWVQAENALGTSM-SPQL-CLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSW 229 (313)
T ss_dssp -----TTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEE-CCCE-EECGGGGEECCCCEEEECCC-------CCSCEEEEE
T ss_pred -----CCCcEEEECccccccceeEEEEEEEECCCCCcc-CccE-EEehhheeccCcCceeEEEEecccccCCCCeEEEEE
Confidence 112222332 24999999999999999999974 3222 355555567789999988754 468999999
Q ss_pred EeCCccccCCCCceEEEEEE-EcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCC---CCceEEEe
Q psy14886 408 EPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP---ESEVVTIW 483 (505)
Q Consensus 408 ~~~~~~~~~~~i~~Y~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~---~s~~~~~~ 483 (505)
++|+ ..+..+++|+|+|+ ..+...|....... .....+.|.+|.|++.|.|+|+|.|..|.|+ +|+.+.+.
T Consensus 230 ~~p~--~~~~~~l~Y~v~y~~~~~~~~w~~~~~~~---~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~ 304 (313)
T 2d9q_B 230 EPWQ--PGLHINQKCELRHKPQRGEASWALVGPLP---LEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELR 304 (313)
T ss_dssp ECCG--GGTTSCEEEEEEEEESSSCCCCEEEEEEC---SCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEEC
T ss_pred CCCC--CCCceeEEEEEEEccCCCCCCcEEccccc---CcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCcccee
Confidence 9842 34444689999999 66777898654332 1346789999999999999999999988886 55666777
Q ss_pred ecc
Q psy14886 484 HDP 486 (505)
Q Consensus 484 t~p 486 (505)
|..
T Consensus 305 T~~ 307 (313)
T 2d9q_B 305 TTE 307 (313)
T ss_dssp CCC
T ss_pred CCc
Confidence 654
No 43
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=1.6e-29 Score=239.42 Aligned_cols=264 Identities=19% Similarity=0.290 Sum_probs=195.8
Q ss_pred CCCCCceEEEEEE-eccCCCeEEEEECCEECcCCCCCCCCCCcEEE-ECCeEEEEcCCCCCCCe---EEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEA-FGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPA---MYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~-~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G---~Y~C~~~~~~~~~ 75 (505)
+.+|+.++|.|.+ .+.|.+.+.|+|++..............++.. .+++|.|.+++ .+|+| .|+|.+.|..+..
T Consensus 112 ~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~-~~d~G~~~~Y~C~a~n~~~~~ 190 (395)
T 1bih_A 112 PIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVT-KEDVSDIYKYVCTAKNAAVDE 190 (395)
T ss_dssp CBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEEC-GGGCCSSEEEEEEEECTTCSS
T ss_pred eeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEe-eccCCCceEEEEEEEecccce
Confidence 4689999999996 78899999999986211100000001345544 46789999999 99999 9999999988775
Q ss_pred EeeEEEEEEe-c-CCCcc----CCC--CCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe----eCC-
Q psy14886 76 YSSAQLRVLT-L-KPSFK----KRP--LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF----ENG- 142 (505)
Q Consensus 76 ~~~~~l~v~~-~-~p~~~----~~~--~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~----~~~- 142 (505)
.......... . .+... ..+ ......+.+|+.+.|.|.+.+.|.+.+.|+++|..+.......+. ..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~ 270 (395)
T 1bih_A 191 EVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGK 270 (395)
T ss_dssp CEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTS
T ss_pred EEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCc
Confidence 4433222211 0 00000 000 123467899999999999999999999999999988653222221 112
Q ss_pred CEEEcCCCCCCCEEEEEEEEcCCCceee-eEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCE
Q psy14886 143 NLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221 (505)
Q Consensus 143 ~l~i~~v~~~d~G~y~C~~~~~~g~~~~-~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~ 221 (505)
.|.|.++..+|+|.|+|.|.|..|.... .+.|.|..+|.+.........+..|+.+.|.|.+.+.|.+. +.|+++|.
T Consensus 271 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~--v~W~~~g~ 348 (395)
T 1bih_A 271 RLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPN--VVWSHNAK 348 (395)
T ss_dssp EEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCC--CEEEETTE
T ss_pred eEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCe--eEEEECCE
Confidence 5999999999999999999999998766 78899988777665433336788999999999999988775 56999998
Q ss_pred EecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
.+... .....++.|.|..+..+|.|.|+|.|.|..|.....+.|.|
T Consensus 349 ~~~~~--------~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 349 PLSGG--------RATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp ECCSS--------SEEEETTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCCC--------ceEEECCEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 87652 23334569999999999999999999999999988888876
No 44
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=5.5e-30 Score=231.65 Aligned_cols=261 Identities=18% Similarity=0.183 Sum_probs=190.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|++++|.|.+.+ .+.|++++...... .....+++|.|.+++ .+|+|.|+|.+.+..+.....+.
T Consensus 16 v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~--------~~~~~~~~L~i~~~~-~~d~G~Y~C~~~~~~~~~~~~~~ 82 (289)
T 3ejj_X 16 VEPGETVTLRCVSNG----SVEWDGPISPYWTL--------DPESPGSTLTTRNAT-FKNTGTYRCTELEDPMAGSTTIH 82 (289)
T ss_dssp ECTTCCEEEEEECSS----CCEEECSCSSSSEE--------CCCSSCCEEEESSCC-GGGCEEEEEECCC-----CEEEE
T ss_pred ECCCCCEEEEEEeCC----cEEEccCCCceEEE--------eccCCccEEEEeeec-cccCEEEEEEEeccCCcceeEEE
Confidence 468999999999976 49999876432100 011134789999999 99999999999988777777788
Q ss_pred EEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCe-EEEEE-CCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEE
Q psy14886 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK-FVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 158 (505)
Q Consensus 81 l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-i~W~~-~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 158 (505)
|.|...+..+...+ ....+.+|+++.|.|.+.+.+.+. +.|++ ++..+....+.....++.|.|.++..+|+|.|+
T Consensus 83 l~V~~~~~~~~~~~--~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 160 (289)
T 3ejj_X 83 LYVKDPAHSWNLLA--QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYV 160 (289)
T ss_dssp EEECCSSCSEEESC--SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEE
T ss_pred EEEeCCCcceeccc--ceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEE
Confidence 88886333233333 567789999999999999876654 99986 777777777777777788999999999999999
Q ss_pred EEEE-cCCCceeeeEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeee-cCCCCeEEEEEeCCEEecCCCCCcccC
Q psy14886 159 CTAT-NVHGMDESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMDLNELET 233 (505)
Q Consensus 159 C~~~-~~~g~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~~~w~~~~~~~~~~~~~~~~~ 233 (505)
|.+. +..+.....+.|.|.. .++.+...+....+..|+.+.|.|.+.+ .|. ..+.|++++..+.........
T Consensus 161 C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~--~~i~W~~~~~~~~~~~~~~~~- 237 (289)
T 3ejj_X 161 CKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVG--FNVILKRGDTKLEIPLNSDFQ- 237 (289)
T ss_dssp EEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSC--CEEEEEETTEECCCCEEEEEC-
T ss_pred EEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCc--eEEEEEECCEEeeccCCcccc-
Confidence 9999 5445555668888873 2333333345556678999999999987 344 467799999887543211100
Q ss_pred CeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 234 ~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
.........|.|..+..+|.|.|+|.|.|..|....++.|.+...+
T Consensus 238 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 238 DNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp SSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred cceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 1112234689999999999999999999999999999999886554
No 45
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.97 E-value=1.5e-29 Score=239.52 Aligned_cols=257 Identities=13% Similarity=0.152 Sum_probs=173.9
Q ss_pred CCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEe-eEEE
Q psy14886 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS-SAQL 81 (505)
Q Consensus 3 ~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l 81 (505)
.|+.+.|.|.+.|.|.+.|+|+|++..+..... .....+......| + ..|+|.|+|.|.|..|.... .+.|
T Consensus 153 ~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~--~~~~~~~~~~~~l-----~-~~d~G~Y~C~A~N~~G~~~~~~~~l 224 (423)
T 3qs7_E 153 MENQDALVCISESVPEPIVEWVLCDSQGESCKE--ESPAVVKKEEKVL-----H-ELFGTDIRCCARNELGRECTRLFTI 224 (423)
T ss_dssp CSSSSCEEEEEEESSCCEEEEEEC---------------CEEECCSEE-----C-CCCSSCEEEEEECSSCEEEEECEEE
T ss_pred cCCceEEEEEEeeecCCeEEEEECCCCCccccc--cccccccccceEE-----e-cccCeEEEEEEEcCCCCcceeeEEE
Confidence 578889999999999999999999876532100 0011111111222 5 78999999999999887654 3556
Q ss_pred EEEecCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCCeEEEEECCEEecCCCcE---------EEeeCCCEEEcCCCC
Q psy14886 82 RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRR---------KIFENGNLLISPVSR 151 (505)
Q Consensus 82 ~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~~i~W~~~g~~~~~~~~~---------~~~~~~~l~i~~v~~ 151 (505)
.|.. +|.+ . .....+.+|+.+.|.|.+.| .|.+.+.|+++|..+...... .....++|.|.++..
T Consensus 225 ~V~~-~p~~--~--~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 299 (423)
T 3qs7_E 225 DLNQ-TPQT--T--LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVAR 299 (423)
T ss_dssp ESSS-CCCS--S--TTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCT
T ss_pred EEec-CCcc--C--CCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCH
Confidence 6653 3433 2 23567899999999999998 577899999999877543211 112234699999999
Q ss_pred CCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCC-CceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc
Q psy14886 152 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 230 (505)
+|+|.|+|.|.|. ....+.|.|..+|.+..... ....+..|+.+.|.|.+.+.|.| .+.|+++|..+.....
T Consensus 300 ~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p--~i~W~k~g~~l~~~~~-- 372 (423)
T 3qs7_E 300 NDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI--RCTWTFSRKSFPCEQK-- 372 (423)
T ss_dssp TTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCC--EEEEEETTEEEECBCC--
T ss_pred HHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCC--eEEEEECCEECCCccc--
Confidence 9999999999987 66678888887776543321 34556788999999999999876 5679999999865320
Q ss_pred ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCc
Q psy14886 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 284 (505)
Q Consensus 231 ~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~ 284 (505)
.......+.......+|+|.|+|.|.|..|..+.++.|.|...|.+|..
T Consensus 373 -----~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~~ 421 (423)
T 3qs7_E 373 -----GLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHHH 421 (423)
T ss_dssp -----BCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC----------
T ss_pred -----cccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCccccc
Confidence 0001112223556678999999999999999999999999999887754
No 46
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=1.3e-29 Score=231.74 Aligned_cols=264 Identities=18% Similarity=0.188 Sum_probs=189.1
Q ss_pred CCCCceEEEEEEeccCCC-----eEEEEECCEECcCCCC------CCCCCCcEEE---------ECCeEEEEcCCCCCCC
Q psy14886 2 DNQADLTWTCEAFGVPDV-----TYSWFRNGELLNSETL------PLEDQDRYFI---------QDNVLTIRYLNPERDP 61 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~-----~~~W~~~~~~l~~~~~------~~~~~~~~~~---------~~~~L~i~~~~~~~d~ 61 (505)
..|++++|.|.+.+.+.+ .+.|+|++........ ......++.. .+.+|.|.+++ .+|+
T Consensus 13 ~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~-~~D~ 91 (313)
T 4fqp_A 13 FLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLR-VEDE 91 (313)
T ss_dssp BTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCC-GGGC
T ss_pred ecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCC-hhhC
Confidence 479999999999875533 5999998764321100 0012233332 23579999999 9999
Q ss_pred eEEEEEEEc-ccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecC-CCCCCeEEEEECCEEecCCCcEEEe
Q psy14886 62 AMYQCRAKN-QLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIF 139 (505)
Q Consensus 62 G~Y~C~~~~-~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~ 139 (505)
|.|+|.+.+ ..+.....+.|.+.. +|.+.... ....+..++.+.+.|.+. +.|.+.+.|++++..+.........
T Consensus 92 G~Y~C~v~~~~~~~~~~~~~l~v~~-~P~~~~~~--~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~ 168 (313)
T 4fqp_A 92 GNYTCLFVTFPQGSRSVDIWLRVLA-KPQNTAEV--QKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGF 168 (313)
T ss_dssp EEEEEEEECSSSCEEEEEEEECCBB-CCEEEEEE--CCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECS
T ss_pred EEEEEEEeeccCcceeeeeeeeecc-CCcceecc--cceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeee
Confidence 999998864 445555566676664 45443332 223467788899999864 6788999999998766433222222
Q ss_pred eCC------CEEEcCCCCCCCEEEEEEEEcCCCceee--eEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCC
Q psy14886 140 ENG------NLLISPVSRDDSGIYSCTATNVHGMDES--KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 211 (505)
Q Consensus 140 ~~~------~l~i~~v~~~d~G~y~C~~~~~~g~~~~--~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 211 (505)
.++ .|.|.++...|+|.|+|.|.|..+.... .+.|.|..+|.+.........+..|+.+.|.|.+.+.|.|
T Consensus 169 ~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p- 247 (313)
T 4fqp_A 169 LSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEP- 247 (313)
T ss_dssp STTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCC-
T ss_pred cccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCC-
Confidence 222 3888899999999999999997765544 3556666666655554555566778899999999998876
Q ss_pred eEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 212 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 212 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
..+.|++++..+... ....+..|.|..+..+|.|.|+|.|.|..|..+..+.|.|..+|
T Consensus 248 ~~v~W~~~~~~l~~~---------~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 248 TGYNWSTTMGPLPPF---------AVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp CEEEEEETTBSCCTT---------EEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred cEEEEEECCEECCCc---------eEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 356799998776432 22346789999999999999999999999999999999998654
No 47
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=1.3e-28 Score=241.91 Aligned_cols=268 Identities=16% Similarity=0.243 Sum_probs=182.2
Q ss_pred CCCCceEEEEEEeccCC--CeEEEEECCEECcCCCCC---C-CCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 2 DNQADLTWTCEAFGVPD--VTYSWFRNGELLNSETLP---L-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~--~~~~W~~~~~~l~~~~~~---~-~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
.+|+.++|.|.+.+.|+ +.|+|+|||.++...... . ...+.+. ..+.|.|.+++ .+|+|.|+|.|.|..+..
T Consensus 127 ~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~-~~d~G~Y~C~a~n~~~~~ 204 (523)
T 2rcj_C 127 LQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYA-ASSYLSLTPEQ-WKSHRSYSCQVTHEGSTV 204 (523)
T ss_pred cCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEE-EEEEEEEechh-cCCCceEEEEEEecCccc
Confidence 46899999999998764 499999999888632110 0 0111111 12479999999 999999999999987765
Q ss_pred EeeEEEEEE---ecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecCCC-cEEEee------CCC
Q psy14886 76 YSSAQLRVL---TLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGSGG-RRKIFE------NGN 143 (505)
Q Consensus 76 ~~~~~l~v~---~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~~~-~~~~~~------~~~ 143 (505)
...+.+.+. ..+|.+.... +...+.+|+.+.|.|.+.|. |.+ .|.|+++|..+.... ...... ...
T Consensus 205 ~~~~~~~~~~~~~~~P~v~~~~--~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~ 282 (523)
T 2rcj_C 205 EKTVAPTECSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSV 282 (523)
T ss_pred ccceeeeecCCCCcCCEEEecC--CCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEE
Confidence 555443321 1234333222 22346799999999999887 777 899999997653211 011111 236
Q ss_pred EEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceE-EEeeccEEEEEEeeecCCC--CeEEEEEeCC
Q psy14886 144 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELL--DVAYIWTHNG 220 (505)
Q Consensus 144 l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~~~--~~~~~w~~~~ 220 (505)
|.|.++..+| |.|+|.|.|..|.......+.+...|.+....+.... +..|+.+.|.|.+.+.+++ .+.+.|+++|
T Consensus 283 L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g 361 (523)
T 2rcj_C 283 VTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDG 361 (523)
T ss_pred EEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECC
Confidence 9999999999 9999999999998777777766555654443333333 6789999999999986533 4688899999
Q ss_pred EEecCCCCCc--ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEE
Q psy14886 221 VRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 274 (505)
Q Consensus 221 ~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~ 274 (505)
..+....... ..........+.|.|..+..+|.|.|+|.|.|..+.......+.
T Consensus 362 ~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 362 VQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred eEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEE
Confidence 8886532110 00000111224578888888999999999999877755444444
No 48
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=2.1e-29 Score=237.39 Aligned_cols=256 Identities=25% Similarity=0.423 Sum_probs=197.9
Q ss_pred CCCCCceEEEEEEe-ccCCCeEEEEECCEECcCCCCCCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEEcccCceEe
Q psy14886 1 MDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~-~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~ 77 (505)
+.+|++++|.|.+. +.|.+.+.|+|++.++... ...+... .+++|.|.+++ .+|+|.|+|.+.|..+....
T Consensus 113 v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~-----~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~~g~~~~ 186 (382)
T 1cs6_A 113 ITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIP-----ADGRRFVSQTTGNLYIAKTE-ASDLGNYSCFATSHIDFITK 186 (382)
T ss_dssp EETTSCEEECCCCCSEESCCEEEEEESSTTCBCC-----CCSSEEECTTTCCEEESSCC-GGGCEEEEEEEEEEETTEEE
T ss_pred EecCCcEEEEeCCCCCCCCcEEEEEECCCccccc-----cCceEEEecCceEEEEEeeC-cccCeeEEEEEEEccccccc
Confidence 35799999999964 5688999999998765321 2233333 34789999999 99999999999987643222
Q ss_pred -----eEEEEEEe-----cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEc
Q psy14886 78 -----SAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147 (505)
Q Consensus 78 -----~~~l~v~~-----~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~ 147 (505)
.+.+.|.. .+|.+.... +....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .......|.|.
T Consensus 187 ~~~s~~~~l~v~~~~~~~~~P~~~~~~-~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~---~~~~~~~L~i~ 262 (382)
T 1cs6_A 187 SVFSKFSQLSLAAEDARQYAPSIKAKF-PADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK---WLSSEPLLHIQ 262 (382)
T ss_dssp EEECCCEEEEEESCCCCCEEEEEEECC-CSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC---CSBSSSEEEEC
T ss_pred eeEccceeeccchhhcccCCCceeccC-CCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE---EecCCcEEEEc
Confidence 23444432 133333322 24567899999999999999999999999988765431 11234579999
Q ss_pred CCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCC
Q psy14886 148 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~ 227 (505)
++..+|.|.|+|.|.|..|.....+.|.|..+|.+... +....+..|+.+.|.|.+.+.|.+ .+.|+++|..+...
T Consensus 263 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~g~~~~~~- 338 (382)
T 1cs6_A 263 NVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDV-ITDTEADIGSDLRWSCVASGKPRP--AVRWLRDGQPLASQ- 338 (382)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEC-CCCEEEETTCCEEEECEEEEESCC--EEEEEETTEECCCC-
T ss_pred cCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccC-CCccEEcCCCeEEEEEEeeeecCC--EEEEEECCEECCCC-
Confidence 99999999999999999999888889999877776543 456778899999999999998876 46799999888653
Q ss_pred CCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 228 ~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
......++.|.|..+..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 339 ------~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 339 ------NRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp ------SSEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ------ceEEEECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 2333456789999999999999999999999999999888875
No 49
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=7.5e-29 Score=220.74 Aligned_cols=230 Identities=16% Similarity=0.246 Sum_probs=180.8
Q ss_pred CCCCCceEEEEEEeccCCC-eEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 1 MDNQADLTWTCEAFGVPDV-TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~-~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
|.+|+.++|.|.+.+.|.+ .++|+|++..+.. .+.+|.|.+++ .+|+|.|+|.+.+..+. ..+
T Consensus 13 v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~-------------~~~~l~i~~~~-~~d~G~Y~C~~~~~~~s--~~~ 76 (262)
T 3rjd_A 13 VFQEETVTLHCEVLHLPGSSSTQWFLNGTATQT-------------STPSYRITSAS-VNDSGEYRCQRGLSGRS--DPI 76 (262)
T ss_dssp EETTCCEEEEEECSSCCCTTCEEEEETTEECSC-------------CSSEEEESSCC-GGGCEEEEEEESSSCCC--CCE
T ss_pred eeCCCeEEEEEECCCCCCCceEEEEECCEEeec-------------cCCeEEEecCC-cccCeEEEEEEecCCcc--ccE
Confidence 4589999999999888776 9999999998863 15789999999 99999999999875543 356
Q ss_pred EEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEE
Q psy14886 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 158 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 158 (505)
.+.|.. ++ +...+ ....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ......|.|.++..+|+|.|+
T Consensus 77 ~l~v~~-~~-~~~~~--~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~-----~~~~~~l~i~~~~~~d~G~Y~ 147 (262)
T 3rjd_A 77 QLEIHR-GW-LLLQV--SSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF-----FHWNSNLTILKTNISHNGTYH 147 (262)
T ss_dssp EEEEEC-SS-EEEEE--SCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEE-----EEECCCEEESSCCGGGCEEEE
T ss_pred EEEEec-cc-eEecC--CCeEEecCCeEEEEEEccCCCCCceEEEEECCccccc-----cCCCCeEEEEECChhhCEEEE
Confidence 666664 22 22222 23457899999999998 6778889999999988742 123578999999999999999
Q ss_pred EEEEcCCCceeeeEEEEEEeC--CeeeeeCCCceEEEeeccEEEEEEeeecCC-CC--eEEEEEeCCEEecCCCCCcccC
Q psy14886 159 CTATNVHGMDESKGRLIVLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LD--VAYIWTHNGVRIGNMDLNELET 233 (505)
Q Consensus 159 C~~~~~~g~~~~~~~l~v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~--~~~~w~~~~~~~~~~~~~~~~~ 233 (505)
|.+.|..+.....+.|.|... ++.+... ....+..|+.+.|.|.+.+.|. +. +.+.|++++..+...
T Consensus 148 C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~-~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~------- 219 (262)
T 3rjd_A 148 CSGMGKHRYTSAGISVTVKELFPAPVLNAS-VTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR------- 219 (262)
T ss_dssp EEEESSSEEEEECEEEEEECSSCCCEEEES-SCSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE-------
T ss_pred EEEeCCCCccccceEEEeccCCCCCeEeec-CceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc-------
Confidence 999999887777788888763 3333332 3556889999999999999875 44 456899999877531
Q ss_pred CeeeecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 234 ~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
.....|.|..+..+|.|.|+|.|.|..|..
T Consensus 220 ----~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 220 ----NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp ----ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred ----CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 235689999999999999999999999974
No 50
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=237.99 Aligned_cols=268 Identities=16% Similarity=0.213 Sum_probs=188.3
Q ss_pred CCCCceEEEEEEec-cCCCeEEEEECCEECcCC----------CCCCCCCCcEEE-----ECCeEEEEcCCCCCCCeEEE
Q psy14886 2 DNQADLTWTCEAFG-VPDVTYSWFRNGELLNSE----------TLPLEDQDRYFI-----QDNVLTIRYLNPERDPAMYQ 65 (505)
Q Consensus 2 ~~G~~~~l~C~~~~-~p~~~~~W~~~~~~l~~~----------~~~~~~~~~~~~-----~~~~L~i~~~~~~~d~G~Y~ 65 (505)
.+|++++|.|.+.+ .+.+.|+|+|++...... .......+|+.. .+.+|.|.+++ .+|+|.|+
T Consensus 12 ~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~-~~D~G~Y~ 90 (308)
T 4fom_A 12 VWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIG-FSDSGKYI 90 (308)
T ss_dssp ETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCC-GGGCEEEE
T ss_pred EcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCC-HHHCEEEE
Confidence 47999999999865 345679999965322110 000112344443 23579999999 99999999
Q ss_pred EEEEcc-cCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEecCCCcE----EEe
Q psy14886 66 CRAKNQ-LKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRR----KIF 139 (505)
Q Consensus 66 C~~~~~-~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~----~~~ 139 (505)
|.|.+. .+.....+.+.+.. .|.+.....+.......|+.+.|.|.+ .+.|.+.+.|++++..+...... ...
T Consensus 91 C~a~n~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~ 169 (308)
T 4fom_A 91 CKAVTFPLGNAQSSTTVTVLV-EPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETAT 169 (308)
T ss_dssp EEEEETTTEEEEEEEEEEEEB-CCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEE
T ss_pred EEEeeCCCcceeeeeEEEeee-ccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeeccc
Confidence 999875 44555566677765 333322222344456678999999975 67899999999998776432110 011
Q ss_pred eCCCEEEcCCCCCCCEEEEEEEEcCCCceeee--EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEE
Q psy14886 140 ENGNLLISPVSRDDSGIYSCTATNVHGMDESK--GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 217 (505)
Q Consensus 140 ~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~--~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~ 217 (505)
....|.|..+...|+|.|+|.|.|..+..... +.|.|..+|.+.........+..|+.+.|.|.+.+.|.| ..+.|+
T Consensus 170 ~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p-~~v~W~ 248 (308)
T 4fom_A 170 IISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPP-FKSVWS 248 (308)
T ss_dssp EEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCE-EEEECC
T ss_pred ccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCC-cEEEEE
Confidence 12358999999999999999999987665443 555666666655554555667778999999999998765 357799
Q ss_pred eCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCC
Q psy14886 218 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 280 (505)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~ 280 (505)
+++..+.... ....+..+.|..+..+|+|.|+|.|.|..|..+..+.|.|..+|-
T Consensus 249 k~~~~~~~~~--------~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 249 RLDGQWPDGL--------LASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp BSSSCCCSSC--------BCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred ECCeECCCcE--------EEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 9887664421 122334556778899999999999999999999999999988774
No 51
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=9.5e-29 Score=233.48 Aligned_cols=254 Identities=22% Similarity=0.326 Sum_probs=193.1
Q ss_pred CCCCCceEEEEEEeccC---CCeEEEEECCEECcCCCCCCCCCCcEEE-ECCeEEEEcCCCCCCC-eEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFGVP---DVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDP-AMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p---~~~~~W~~~~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~-G~Y~C~~~~~~~~~ 75 (505)
+.+|+.++|.|.+.+.+ .+.+.|+|++..+..... ....++.. .+++|.|.+++ .+|+ |.|+|.+.|..+..
T Consensus 115 v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~--~~~~~~~~~~~~~L~i~~v~-~~d~~G~Y~C~~~n~~~~~ 191 (388)
T 2v5m_A 115 VIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGA--EYDGKYLVLPSGELHIREVG-PEDGYKSYQCRTKHRLTGE 191 (388)
T ss_dssp EETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSS--CBTTTEEECTTSCEEESSCC-GGGGGCCEEEEEEETTTCC
T ss_pred eecCCcEEEEEECcCCCCCCcceEEEEeCCCccccccc--CCCCcEEEccCCcEEEecCC-ccccCeeEEEEeccCCCCc
Confidence 35799999999998754 378999999876642211 11344544 46789999999 9999 99999999875432
Q ss_pred E-ee---EEEEEEec----CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEE------ecCCCcEEEeeC
Q psy14886 76 Y-SS---AQLRVLTL----KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI------IGSGGRRKIFEN 141 (505)
Q Consensus 76 ~-~~---~~l~v~~~----~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~------~~~~~~~~~~~~ 141 (505)
. .. ..+.|... +|.+.... .....+.+|+.+.|.|.+.|.|.+.+.|++++.. +....+.. ..+
T Consensus 192 ~~~~~~~~~l~v~~~~~~~~p~~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~ 269 (388)
T 2v5m_A 192 TRLSATKGRLVITEPISSSAPRTPALV-QKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVK-QVS 269 (388)
T ss_dssp EEECSSCBCEEEECCCSCEEEECCSSC-CCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEE-EET
T ss_pred eeeccccceEEEecCCcCCCCcCcccc-CCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCcee-ccc
Confidence 2 21 34555531 12121111 1234578999999999999999999999997432 22222332 346
Q ss_pred CCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCE
Q psy14886 142 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221 (505)
Q Consensus 142 ~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~ 221 (505)
+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+... +....+..|+.+.|.|.+.+.|.+ .+.|+++|.
T Consensus 270 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~-~~~~~v~~g~~~~l~C~~~g~p~p--~i~W~~~g~ 346 (388)
T 2v5m_A 270 GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKID-PPTQTVDFGRPAVFTCQYTGNPIK--TVSWMKDGK 346 (388)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEE-SSEEEECTTSCEEEEEEEEEECCC--EEEEEETTE
T ss_pred CEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccC-CCcEEecCCCCEEEEEEeccccCC--eEEEEECCE
Confidence 78999999999999999999999999888889999876665443 456778899999999999998876 567999998
Q ss_pred EecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
.+... +..|.|..+..+|.|.|+|.|.|..|....++.|.|
T Consensus 347 ~i~~~-------------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 347 AIGHS-------------ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp ECSCC-------------SSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ECccC-------------CCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 87542 468999999999999999999999999998888876
No 52
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=4.4e-29 Score=240.49 Aligned_cols=317 Identities=15% Similarity=0.161 Sum_probs=204.6
Q ss_pred CCCCCceEEEEEEeccCCC---eEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceE-
Q psy14886 1 MDNQADLTWTCEAFGVPDV---TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY- 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~---~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~- 76 (505)
+.+|++++|.|.+.+.|++ .|+|+|++.++....... . ..+++|.|.+++ .+|+|.|+|.|.|..|...
T Consensus 98 v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~---~---~~~~~L~i~~~~-~~d~G~Y~C~a~n~~g~~~~ 170 (450)
T 1z7z_I 98 QPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG---E---PAEVTTTVLVRR-DHHGANFSCRTELDLRPQGL 170 (450)
T ss_dssp ECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT---T---TEEEEEEEECCS-SCSSCEEEEEEEEECGGGTS
T ss_pred EeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc---c---ccceEEEEEeec-cccCceEEEEEEcccCCCCc
Confidence 3689999999999997776 999999999886321100 0 123589999999 9999999999998866422
Q ss_pred -------eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCC-C--CCeEEEEECCEEecCCCcEEEeeCCCEEE
Q psy14886 77 -------SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-P--KPKFVWKKDGNIIGSGGRRKIFENGNLLI 146 (505)
Q Consensus 77 -------~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p--~~~i~W~~~g~~~~~~~~~~~~~~~~l~i 146 (505)
....+.|... |...... .....+.+|+.+.|.|.+.+. | .+.+.|+++|..+.. +.... ...+.+
T Consensus 171 ~~~~~~s~~~~l~v~~~-~~~~p~~-~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~~~~~-~~~~~~ 245 (450)
T 1z7z_I 171 ELFENTSAPYQLQTFVL-PATPPQL-VSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTYG-NDSFSA 245 (450)
T ss_dssp CEEEEECCCEECEECCC-CSSCCEE-ECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC--EEEEE-TTEEEE
T ss_pred eEEeeccCccceeeecc-CCCCCEe-cCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--eEEec-CCceeE
Confidence 2344455432 1110000 011468899999999999988 7 689999999998765 22222 222222
Q ss_pred c---CCCCCCCE--EEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCE
Q psy14886 147 S---PVSRDDSG--IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221 (505)
Q Consensus 147 ~---~v~~~d~G--~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~ 221 (505)
. ++..+|+| .|+|.+.|..|.....+.|.|...|..... .....+..|+.+.|.|.+. |.+ .+.| +|.
T Consensus 246 ~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~-~~~~~v~~G~~v~l~C~~~--p~p--~i~W--~g~ 318 (450)
T 1z7z_I 246 KASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVI-LTKPEVSEGTEVTVKCEAH--PRA--KVTL--NGV 318 (450)
T ss_dssp EEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEE-ESCSEEETTCEEEEEEEC-----------------
T ss_pred EEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEe-cCCeeEeCCCcEEEEEecC--CCC--EeEE--CCE
Confidence 2 67899999 999999999998888888888874332222 2244788999999999997 444 5568 666
Q ss_pred EecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCC-c---EEEEEEEEEcCCCCCCCc---eEEEEEeCCe
Q psy14886 222 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-K---ISTKTTVIVEGPPGLPGG---VQVVEVHKTS 294 (505)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g-~---~~~~~~l~v~~~p~~p~~---~~~~~~~~~~ 294 (505)
.+.... ....|.|..+..+|.|.|+|.|.|..+ . ....+.|.|..+|..... -......+..
T Consensus 319 ~~~~~~-----------~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~ 387 (450)
T 1z7z_I 319 PAQPLG-----------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQ 387 (450)
T ss_dssp -----C-----------CCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCE
T ss_pred EcCCCC-----------ceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCe
Confidence 652211 234799999999999999999997655 3 336677778766644322 2344556778
Q ss_pred EEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 295 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 295 v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
+.|.|.. .+.|...+. |......+. ... ..+ . +...+.+.|+|.|.|.+|...
T Consensus 388 ~~l~C~~---~g~P~p~i~----------W~~~g~~~~-------~~g-~~~--~-v~~~d~G~Y~C~a~N~~G~~~ 440 (450)
T 1z7z_I 388 QTPMCQA---WGNPLPELK----------CLKDGTFPL-------PIG-ESV--T-VTRDLEGTYLCRARSTQGEVT 440 (450)
T ss_dssp ECCCCCC---EEESCCEEE----------EEETTTEEC-------CTT-SCE--E-CCGGGCEEEEEEEEETTEEEE
T ss_pred EEEEEec---ccCCCCcEE----------EEECCcccC-------CCC-CeE--e-EehhhCeEEEEEEEeCCCcee
Confidence 8888863 222222233 222211110 011 111 3 778899999999999998764
No 53
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.96 E-value=2.1e-30 Score=239.94 Aligned_cols=269 Identities=19% Similarity=0.252 Sum_probs=197.4
Q ss_pred CCCCCceEEEEEEe-------ccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAF-------GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~-------~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
|.+|++++|.|.+. +.|.+.|.|+|++..+.... ....++...+++|.|.+++ .+|+|.|+|.+.|..+
T Consensus 30 v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~---~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~~~n~~g 105 (339)
T 3o4o_C 30 RLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPG---EEETRMWAQDGALWLLPAL-QEDSGTYVCTTRNASY 105 (339)
T ss_dssp EETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSC---CSSSCEEEETTEEEESSBC-TTCCEEEECCEEETTE
T ss_pred EECCccEEEEeccccccccccCCCCceEEEEECCCCcccCc---cccccEEeeCCeEEECCCC-cccCEEEEEEEECCcc
Confidence 35899999999998 88889999999998743211 1245777888999999999 9999999999999888
Q ss_pred ceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEee-----cCCCCCCeEEEEECCEEecCC-CcEEEeeC-CCEEE
Q psy14886 74 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-----PEAAPKPKFVWKKDGNIIGSG-GRRKIFEN-GNLLI 146 (505)
Q Consensus 74 ~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~-----~~~~p~~~i~W~~~g~~~~~~-~~~~~~~~-~~l~i 146 (505)
.....+.|.|...++.. .........+.+|+.+.|.|. +.+.|.+.+.|+++|..+... .++....+ +.|.|
T Consensus 106 ~~~~~~~l~V~~~~~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i 184 (339)
T 3o4o_C 106 CDKMSIELRVFENTDAF-LPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLV 184 (339)
T ss_dssp EEEEEEEEEEECSCGGG-HHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEE
T ss_pred eEEEEEEEEEEcCCCcc-ccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEE
Confidence 77778888888633321 111122346889999999999 788889999999999988754 34444433 46999
Q ss_pred cCCCCCCCEEEEEEEEcCCCc----eeeeEEEEEEeC----CeeeeeCCCceEEEeeccEEEEEEe---eecCCCCeEEE
Q psy14886 147 SPVSRDDSGIYSCTATNVHGM----DESKGRLIVLHG----PSYYEQLPPKITIAAHRNLQLRCSA---HTEELLDVAYI 215 (505)
Q Consensus 147 ~~v~~~d~G~y~C~~~~~~g~----~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~---~~~~~~~~~~~ 215 (505)
.++..+|+|.|+|.|.|..|. ....+.|.|... ++.+...+....+..|+.+.|.|.+ .+.|. ...+.
T Consensus 185 ~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~-~~~v~ 263 (339)
T 3o4o_C 185 HDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPL-TTMLW 263 (339)
T ss_dssp SSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCS-SCEEE
T ss_pred cccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCC-CceEE
Confidence 999999999999999998773 455677777643 2233333555677889999999999 67662 34678
Q ss_pred EEeCCEEecCCCC---CcccCCeeeecCC------eEEEecCCCCCC-EEEEEEEEecCCcEEEEEEEEE
Q psy14886 216 WTHNGVRIGNMDL---NELETPNINIDGG------LLEITNASFADA-GEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 216 w~~~~~~~~~~~~---~~~~~~~~~~~~~------~l~i~~~~~~~~-g~y~C~~~n~~g~~~~~~~l~v 275 (505)
|++++..+..... ............+ .|.|..+..+|. |.|+|.|.|..|..+..+.+.+
T Consensus 264 W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 264 WTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp EESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred EEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 9998876643210 0000011111122 799999999997 9999999999998766555433
No 54
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=3.6e-29 Score=230.98 Aligned_cols=267 Identities=16% Similarity=0.184 Sum_probs=196.0
Q ss_pred CCCCCceEEEEEEecc----CCCeEEEEECC--EECcCC--------CCCCCCCCcEEEE-----CCeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGV----PDVTYSWFRNG--ELLNSE--------TLPLEDQDRYFIQ-----DNVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~----p~~~~~W~~~~--~~l~~~--------~~~~~~~~~~~~~-----~~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.|.+.+. +.+.+.|+|++ ...... .......+|+.+. +.+|.|.+++ .+|+
T Consensus 26 v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~-~~D~ 104 (331)
T 3u83_A 26 GFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLE-LEDE 104 (331)
T ss_dssp EETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCC-GGGC
T ss_pred EEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccC-cccC
Confidence 3589999999999875 45679999954 111000 0001134566553 5689999999 9999
Q ss_pred eEEEEEE-EcccCceEeeEEEEEEecCCCccCCCCCceEEeeCC---CeEEEEee-cCCCCCCeEEEEECC--EEec---
Q psy14886 62 AMYQCRA-KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEG---GNVTIFCN-PEAAPKPKFVWKKDG--NIIG--- 131 (505)
Q Consensus 62 G~Y~C~~-~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g---~~v~l~C~-~~~~p~~~i~W~~~g--~~~~--- 131 (505)
|.|+|.+ .+..+.....+.|.|.. +|.+..........+.+| +.+.|.|. +.+.|.+.+.|++++ ....
T Consensus 105 G~Y~C~~~~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 183 (331)
T 3u83_A 105 GVYICEFATFPTGNRESQLNLTVMA-KPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEI 183 (331)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEB-CCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEE
T ss_pred cEEEEEEEecCCCccEEEEEEEEec-CCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcccccee
Confidence 9999984 45566666778888886 565543333455678888 88999998 888899999999953 2211
Q ss_pred --CCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCC
Q psy14886 132 --SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 209 (505)
Q Consensus 132 --~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 209 (505)
..... .....|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+.........+..|+.+.|.|.+.+.|.
T Consensus 184 ~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 261 (331)
T 3u83_A 184 RNPNGTV--TVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPP 261 (331)
T ss_dssp ECTTSCE--EEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESC
T ss_pred ECCCCcE--EEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCC
Confidence 11111 11234888888999999999999999988888888988888876655555566788999999999999987
Q ss_pred CCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEe-cCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCC
Q psy14886 210 LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT-NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281 (505)
Q Consensus 210 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~ 281 (505)
+. .+.|++++..+... ....+..|.|. .+..+|.|.|+|.|.|..|..+..+.|.|...+..
T Consensus 262 p~-~i~W~~~~~~~~~~---------~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 324 (331)
T 3u83_A 262 AT-EYHWTTLNGSLPKG---------VEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAAL 324 (331)
T ss_dssp CC-EEEEEETTBSCCTT---------EEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC----
T ss_pred CC-EEEEEECCCccccc---------ceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccchh
Confidence 64 36799988766432 22346789999 89999999999999999999999999999876654
No 55
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.96 E-value=3.1e-28 Score=222.94 Aligned_cols=267 Identities=15% Similarity=0.185 Sum_probs=192.2
Q ss_pred ceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE
Q psy14886 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268 (505)
Q Consensus 189 ~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~ 268 (505)
.+.+..|.+++|.|.+.+.+ +...+.|.+++..+.... ......++.|.|.++...|.|.|+|. ..|...
T Consensus 15 ~v~~~~G~~v~l~C~~~~~~-~~~~i~W~~~~~~~~~~~------~~~~~~~~~L~i~~v~~~d~G~Y~C~---~~g~~~ 84 (325)
T 1n26_A 15 VLTSLPGDSVTLTCPGVEPE-DNATVHWVLRKPAAGSHP------SRWAGMGRRLLLRSVQLHDSGNYSCY---RAGRPA 84 (325)
T ss_dssp EEEECTTCCEEEECTTSCTT-CCSEEEEEEECSSSSCCC------EEEEEESSEEEECSCCGGGCEEEEEE---SSSSCS
T ss_pred cEECCCCCcEEEEeCCCCCC-CCceEEEEECCccCCccc------cccccccceEEecccchhhCeEeEEE---eCCEEe
Confidence 34446899999999988754 234677998765542111 12334567899999999999999999 367777
Q ss_pred EEEEEEEcCCCCCCCceEEEEE-eCCeEEEEeecCCCCCCCCceEEEEEEeC-CC--CCe-EEeeeccccceeeeecCce
Q psy14886 269 TKTTVIVEGPPGLPGGVQVVEV-HKTSATIQWTDGATNGRPITHYKIIARTN-WN--STW-FNVSEHVIGKEVDRYTGRK 343 (505)
Q Consensus 269 ~~~~l~v~~~p~~p~~~~~~~~-~~~~v~l~w~~~~~~~~~i~~y~v~~~~~-~~--~~w-~~~~~~~~~~~~~~~~~~~ 343 (505)
..+.|.|..+|..|. +.+... ....+.++|+++.+.+ ....|.+.|+.. +. ..| ..+..... .+..
T Consensus 85 ~~~~L~V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~~-~~~~y~l~~~~~~~~~~~~~~~~c~~~~~-------~~~~ 155 (325)
T 1n26_A 85 GTVHLLVDVPPEEPQ-LSCFRKSPLSNVVCEWGPRSTPS-LTTKAVLLVRKFQNSPAEDFQEPCQYSQE-------SQKF 155 (325)
T ss_dssp CEEEEEECCCCCCCC-CEEEBSSTTSCEEEEECCSSCCC-TTCEEEEEEEEESSSSCEEEEEEEEEETT-------TTEE
T ss_pred eeEEEEeccCCCCCc-eeEEeecCCCcEEEEECCCCCCC-CCceEEEEEEEccCCCCCcccccCCCCCC-------CCCE
Confidence 789999999999887 666532 3668999999887655 347899988764 21 122 22211111 1223
Q ss_pred eeEEeeecc-CCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccc--cccEEEEEEeCCccccCCCCc
Q psy14886 344 EASIENVLV-PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK--IGDLSISWEPLPREKQNAPNI 420 (505)
Q Consensus 344 ~~~~~~~L~-~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~--~~~v~l~W~~~~~~~~~~~i~ 420 (505)
...+.. +. +.+.|.|+|.|.|..|.+. +... .+.+....++.||.++.+.... .+++.|+|+++...+.++.++
T Consensus 156 ~c~i~~-~~~~~~~Y~f~v~A~N~~G~~~-s~~~-~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~ 232 (325)
T 1n26_A 156 SCQLAV-PEGDSSFYIVSMCVASSVGSKF-SKTQ-TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRL 232 (325)
T ss_dssp EEEECC-CTTCCCEEEEEEEEEETTEEEE-CCCE-EEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCE
T ss_pred EEEECC-CcccCcEEEEEEEEEcCCCCcc-cCcE-EEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeE
Confidence 334443 54 7899999999999999874 2221 3445556677899999987654 469999999965545677899
Q ss_pred eEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEE
Q psy14886 421 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481 (505)
Q Consensus 421 ~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~ 481 (505)
+|.|+|+..+...|....... ....+.|.+|.|++.|.|||+|.|.+|.|++|++..
T Consensus 233 ~Y~V~yr~~~~~~W~~~~~~~----~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~ 289 (325)
T 1n26_A 233 RFELRYRAERSKTFTTWMVKD----LQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSP 289 (325)
T ss_dssp EEEEEEEETTCSCCEEEECGG----GCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCC
T ss_pred EEEEEEEeCCCCCCEEEcccC----CceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCC
Confidence 999999999888898655432 235788999999999999999999999887776554
No 56
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=8e-29 Score=238.68 Aligned_cols=317 Identities=14% Similarity=0.096 Sum_probs=212.5
Q ss_pred CCCCCceEEEEEEeccCCCeE-----EEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTY-----SWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~-----~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
|.+|++++|.|.+.+ |.+.+ .|+|++..+.. .++ ..|.|.+++ . |+| |+|.+.+..+..
T Consensus 11 v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~--------~~~----~~l~i~~v~-~-d~g-Y~C~a~~~~~~~ 74 (450)
T 1z7z_I 11 LPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG--------NNR----KVYELSNVQ-E-DSQ-PMCYSNCPDGQS 74 (450)
T ss_dssp EETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST--------TTE----EEEEEEEEC-S-CBC-CEEEEEETTEEE
T ss_pred EecCCcEEEEEEccC-CCcccccccceeeecceEecC--------CCc----eEEEEEecc-c-CCe-eEEEEeCCCCcc
Confidence 468999999999998 88888 99998875531 222 378999999 7 999 999998666666
Q ss_pred EeeEEEEEEecCCCcc-CCCCCceEEeeCCCeEEEEeecCCCCCC---eEEEEECCEEecCCCcEEEeeCCCEEEcCCCC
Q psy14886 76 YSSAQLRVLTLKPSFK-KRPLESETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 151 (505)
Q Consensus 76 ~~~~~l~v~~~~p~~~-~~~~~~~~~v~~g~~v~l~C~~~~~p~~---~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~ 151 (505)
...+.|.|.. +|.+. ..+ ....+.+|+++.|.|.+.+.|.+ .+.|+++|..+..........++.|.|.++..
T Consensus 75 ~~~~~l~V~~-~P~~~~~~~--~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~ 151 (450)
T 1z7z_I 75 TAKTFLTVYW-TPERVELAP--LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRD 151 (450)
T ss_dssp EEECEEEEEB-CCSEEEECC--CCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSS
T ss_pred eeEEEEEEEe-CCCcceecC--CCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeecc
Confidence 6678888886 55543 333 33568899999999999998887 99999999987543211111234799999999
Q ss_pred CCCEEEEEEEEcCCCcee--------eeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeec-CCCCeEEEEEeCCEE
Q psy14886 152 DDSGIYSCTATNVHGMDE--------SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVR 222 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~~~--------~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~~w~~~~~~ 222 (505)
+|+|.|+|.|.|..|... ....+.|...|...........+..|+.+.|.|.+.+. |.+.+.+.|++++..
T Consensus 152 ~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~ 231 (450)
T 1z7z_I 152 HHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQR 231 (450)
T ss_dssp CSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEE
T ss_pred ccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEe
Confidence 999999999999876432 22344444321110000011578899999999999988 534678899999988
Q ss_pred ecCCCCCcccCCeeeecCCeEEEe---cCCCCCCE--EEEEEEEecCCcEEEEEEEEEcCCCCCCCce-EEEEEeCCeEE
Q psy14886 223 IGNMDLNELETPNINIDGGLLEIT---NASFADAG--EYECVVKSTVGKISTKTTVIVEGPPGLPGGV-QVVEVHKTSAT 296 (505)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~~~g--~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~-~~~~~~~~~v~ 296 (505)
+... .......+.+. .+..+|.| .|+|.|.|..|.......|.|...|.|...+ ......+..++
T Consensus 232 ~~~~---------~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~~~~v~~G~~v~ 302 (450)
T 1z7z_I 232 LNPT---------VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVT 302 (450)
T ss_dssp CCCE---------EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEE
T ss_pred CCce---------EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecCCeeEeCCCcEE
Confidence 7541 11112222222 56789999 9999999999998888899988755421100 01344667888
Q ss_pred EEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCC
Q psy14886 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 368 (505)
Q Consensus 297 l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G 368 (505)
|.|... +.. ...| ....+. .......+.+.. +...+...|+|.|.|..|
T Consensus 303 l~C~~~-----p~p----------~i~W--~g~~~~-----~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~~ 351 (450)
T 1z7z_I 303 VKCEAH-----PRA----------KVTL--NGVPAQ-----PLGPRAQLLLKA-TPEDNGRSFSCSATLEVA 351 (450)
T ss_dssp EEEEC--------------------------------------CCCCCEEEEC-CGGGTTCEEEEEEEEEET
T ss_pred EEEecC-----CCC----------EeEE--CCEEcC-----CCCceEEEEEec-CcccCCceEEEEEEcCCC
Confidence 888743 111 2223 111110 000112344444 889999999999997665
No 57
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.96 E-value=7.8e-31 Score=270.46 Aligned_cols=458 Identities=18% Similarity=0.147 Sum_probs=60.0
Q ss_pred CCCCCceEEEEEEec--cCCCeEEEEECCEECcCCCCCCCC-----CCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFG--VPDVTYSWFRNGELLNSETLPLED-----QDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~--~p~~~~~W~~~~~~l~~~~~~~~~-----~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
|.+|+.++|.|.+.+ .+...+.|++++..+......... ........++|.|.+++ .+|+|.|+|.+.|..+
T Consensus 236 v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~~~~~~~ 314 (772)
T 3v2a_R 236 LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVT-RSDQGLYTCAASSGLM 314 (772)
T ss_dssp EETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCC-STTCSEEEEEEECSSC
T ss_pred EecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCC-cCCCeEEEEEEEcCCc
Confidence 358999999999987 456889999998876532110000 00122345689999999 9999999999999888
Q ss_pred ceEeeEEEEEEecCCCccCCC-CCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCC
Q psy14886 74 TRYSSAQLRVLTLKPSFKKRP-LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 152 (505)
Q Consensus 74 ~~~~~~~l~v~~~~p~~~~~~-~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~ 152 (505)
.....+.|.|.. +|.+...+ ......+.+|+.+.|.|.+.+.|.+.+.|+++|..+.... .+.....|.|.++...
T Consensus 315 ~~~~~~~l~V~~-~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~--~~~~~~~L~i~~v~~~ 391 (772)
T 3v2a_R 315 TKKNSTFVRVHE-KPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNH--TIKAGHVLTIMEVSER 391 (772)
T ss_dssp EEEEEEEEEEEC-CCC----------------------------------------------------------------
T ss_pred ceeEEEEEEEeC-CCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCc--eEccceeEEEecCChh
Confidence 777788888886 56544332 2234568899999999999999999999999998876532 2224478999999999
Q ss_pred CCEEEEEEEEcCCCceee--eEEEEEEeCCeeeee--CCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecC---
Q psy14886 153 DSGIYSCTATNVHGMDES--KGRLIVLHGPSYYEQ--LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN--- 225 (505)
Q Consensus 153 d~G~y~C~~~~~~g~~~~--~~~l~v~~~p~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~--- 225 (505)
|+|.|+|.|.|..|.... .+.|.|..+|.+... ......+..|+.+.|.|.+.+.|.|. .+.|++++.....
T Consensus 392 d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-~v~W~~~~~~~~~~~~ 470 (772)
T 3v2a_R 392 DTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPH-HIHWYWQLEEECANEP 470 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCc-EEEEEEcCCccccccc
Confidence 999999999998886543 466777666655322 11122377899999999999987764 2557765321000
Q ss_pred -----------------------C-CCCcccCCe-----eeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 226 -----------------------M-DLNELETPN-----INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 226 -----------------------~-~~~~~~~~~-----~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
. ......... .......|.+..+ +|.|.|+|.|.|..|.....+.+.|.
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~ 548 (772)
T 3v2a_R 471 SQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVT 548 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEE
Confidence 0 000000000 0011135556554 68999999999999998888888888
Q ss_pred CCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCC-----------------CCeEEeeeccccceeeee
Q psy14886 277 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-----------------STWFNVSEHVIGKEVDRY 339 (505)
Q Consensus 277 ~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~-----------------~~w~~~~~~~~~~~~~~~ 339 (505)
.+|............+..+.|.|... +.+...+.+....... ..|....... ...
T Consensus 549 ~~p~i~~~p~~~~~~G~~v~l~C~~~---~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 620 (772)
T 3v2a_R 549 RGPEITLQPDMQPTEQESVSLWCTAD---RSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMF-----SNS 620 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeccCCcccccCCceEEEEecc---CCCCCCcEEEEcCCcccccccCcccccccccccceeeccceee-----ecC
Confidence 76654333333345667788888743 2221222222110000 0000000000 000
Q ss_pred c-CceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCC---CCCceeeeeccccccEEEEEEeCCcccc
Q psy14886 340 T-GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY---QAPSRIGGGGGKIGDLSISWEPLPREKQ 415 (505)
Q Consensus 340 ~-~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~---~~P~~~~~~~~~~~~v~l~W~~~~~~~~ 415 (505)
. ....+.+.+ +...+.+.|+|.|.|..|....+... .+......+| ..|.+..+. ....+.|.... .+
T Consensus 621 ~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~~~~~~s~~~-~l~v~~~~~P~~~~~~~~~~v~--~g~~~~l~C~~----~g 692 (772)
T 3v2a_R 621 TNDILIMELKN-ASLQDQGDYVCLAQDRKTKKRHCVVR-QLTVLERVAPTITGNLENQTTS--IGESIEVSCTA----SG 692 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceEEEEECC-CCccCCcEEEEEEEeCCCCeEEEEEE-eecccccCCCEeecCCCceEEe--CCCCEEEEEEe----Cc
Confidence 0 111244555 99999999999999976554322211 1111111111 112222221 23445555543 11
Q ss_pred CCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 416 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 416 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
..+ -.|.|...+..-........ ......+.|.++.+.-.=.++..|.|.+|....+-.+.+.-.|
T Consensus 693 ~P~---p~v~W~k~g~~l~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p 758 (772)
T 3v2a_R 693 NPP---PQIMWFKDNETLVEDSGIVL--KDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQ 758 (772)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cCC---CeEEEEECCeECcCCCCeEE--cCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCC
Confidence 111 13445444411000000000 0012345566666656666788899999987766555544333
No 58
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.96 E-value=1.7e-28 Score=218.50 Aligned_cols=237 Identities=20% Similarity=0.251 Sum_probs=180.4
Q ss_pred CCCCCceEEEEEEec-cCCC--eEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcC---CCCCCCeE--EEEEEEccc
Q psy14886 1 MDNQADLTWTCEAFG-VPDV--TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYL---NPERDPAM--YQCRAKNQL 72 (505)
Q Consensus 1 v~~G~~~~l~C~~~~-~p~~--~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~---~~~~d~G~--Y~C~~~~~~ 72 (505)
|.+|+.++|.|.+.+ .|.+ .|+|+|++..+.. ++...+..|.+..+ + .+|+|. |+|.+.|..
T Consensus 15 v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~---------~~~~~~~~~~~~~~~~~~-~~d~g~g~Y~C~a~n~~ 84 (265)
T 2oz4_A 15 LEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---------TVTYGNDSFSAKASVSVT-AEDEGTQRLTCAVILGN 84 (265)
T ss_dssp EETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC---------EEEECSSEEEEEEEEEEC-GGGCEEEEEEEEEEETT
T ss_pred EecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc---------eEeeCCCeEEEEeecccc-cccCCcceEEEEEecCC
Confidence 468999999999998 7765 9999999998862 44445667777766 6 678884 999999988
Q ss_pred CceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCC
Q psy14886 73 KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 152 (505)
Q Consensus 73 ~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~ 152 (505)
+.....+.|.|...++ ....+ ....+.+|+.+.|.|.+. |.+.+.| +|..+.... ..+.|.|..+..+
T Consensus 85 ~~~~~~~~l~V~~~p~-p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~-----~~~~l~i~~~~~~ 152 (265)
T 2oz4_A 85 QSQETLQTVTIYSFPA-PNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG-----PRAQLLLKATPED 152 (265)
T ss_dssp EEEEEEEEEEEECCCC-CEEEE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS-----SEECCEEECCGGG
T ss_pred CCcEEEEEEEEeCCCC-ceeec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC-----CcEEEEEcccccc
Confidence 8887788898875433 22222 234578899999999998 7889999 777764322 1245889999999
Q ss_pred CCEEEEEEEEcCC-Ccee---eeEEEEEEeCCeeeeeC-CCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCC
Q psy14886 153 DSGIYSCTATNVH-GMDE---SKGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227 (505)
Q Consensus 153 d~G~y~C~~~~~~-g~~~---~~~~l~v~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~ 227 (505)
|+|.|+|.|.|.. |... ..+.|.|..+|.+.... +....+..|+.+.|.|.+.+.|.| .+.|++++..+...
T Consensus 153 ~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p--~i~W~~~~~~~~~~- 229 (265)
T 2oz4_A 153 NGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLP--ELKCLKDGTFPLPI- 229 (265)
T ss_dssp TTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCC--EEEEEETTTEECCT-
T ss_pred CCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCC--eEEEEECCcccCCC-
Confidence 9999999998544 6655 55778887777664432 345678899999999999999876 45699988733221
Q ss_pred CCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 228 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 228 ~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
..+. .+..+|.|.|+|.|.|..|..+..+.|.|..
T Consensus 230 -------------g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 230 -------------GESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp -------------TSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred -------------CcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 1121 3667999999999999999999999998875
No 59
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.96 E-value=7.1e-28 Score=205.46 Aligned_cols=198 Identities=29% Similarity=0.543 Sum_probs=164.7
Q ss_pred EcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCC-CCeEEeeeccccceeeeecCceeeEEeeeccC
Q psy14886 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVP 353 (505)
Q Consensus 275 v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 353 (505)
|+.+|.+|.++.+.. ..+++.|+|.++.+++.++.+|.|+|+.... ..|......+. +....+..+ |.|
T Consensus 2 v~~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~--------~~~~~~~~~-L~p 71 (205)
T 1cfb_A 2 VQDVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVP--------NTDSSFVVQ-MSP 71 (205)
T ss_dssp CCCCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEE--------TTCSEEEEE-CCS
T ss_pred cccCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccC--------CCceEEEEe-CCC
Confidence 567899999999999 9999999999998788899999999987654 67865543332 233344455 999
Q ss_pred CceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC-
Q psy14886 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT- 432 (505)
Q Consensus 354 ~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~- 432 (505)
++.|.|+|+|.|..|.|.++.....+.|.+..|+.+|.++.+...+.++|.|.|++|+..+.+|.+.+|+|+|+..+..
T Consensus 72 ~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~ 151 (205)
T 1cfb_A 72 WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAA 151 (205)
T ss_dssp SEEEEEEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTC
T ss_pred CCEEEEEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCC
Confidence 9999999999999999998855558889899998899999999888999999999976668999999999999998744
Q ss_pred CcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCC-CceEEEeec
Q psy14886 433 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE-SEVVTIWHD 485 (505)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~-s~~~~~~t~ 485 (505)
.|....+.. .....+.|.+|.|++.|.|+|+|+|.+|.|++ |+.+.+.|.
T Consensus 152 ~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 152 AWENNNIFD---WRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CCEEEEECC---TTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CcEEEEecC---CCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 477655432 12367899999999999999999999999995 788888775
No 60
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=1.5e-29 Score=229.15 Aligned_cols=260 Identities=17% Similarity=0.201 Sum_probs=187.1
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE--CCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ--DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~--~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
|.+|++++|.|.+.+. +.|++++.... ++... .++|.|.+++ .+|+|.|+|.+.|..+.....
T Consensus 16 v~~G~~v~L~C~~~~~----v~W~~~~~~~~----------~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~~~~~~~~ 80 (292)
T 4dkd_C 16 VKPGATVTLRCVGNGS----VEWDGPPSPHW----------TLYSDGSSSILSTNNAT-FQNTGTYRCTEPGDPLGGSAA 80 (292)
T ss_dssp ECTTCCEEEEEECSSC----CCBCCCCCSSC----------EECCBTTEEEEEESSCC-GGGCSCEEECCCC----CCEE
T ss_pred EcCCCcEEEEEcCCCc----eEEccCCCCce----------EEeccCceEEEEEcccc-cccCEEEEEEEccCCCCcceE
Confidence 4689999999999873 89997653211 11111 2589999999 999999999999887777777
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCC--CeEEEEEC-CEEecCCCcEEEeeCCCEEEcCCCCCCCE
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKD-GNIIGSGGRRKIFENGNLLISPVSRDDSG 155 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~--~~i~W~~~-g~~~~~~~~~~~~~~~~l~i~~v~~~d~G 155 (505)
+.|.|...+..+...+ ....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+....+.....++.|.|.++...|+|
T Consensus 81 ~~l~V~~~~~~~~~~~--~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 157 (292)
T 4dkd_C 81 IHLYVKDPARPWNVLA--QEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQ 157 (292)
T ss_dssp ECCEECCSSCCEEESC--SEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCS
T ss_pred EEEEEcCccccccccC--CeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCe
Confidence 8888886332233332 4577899999999999987 44 68999997 66665555666666677999999999999
Q ss_pred EEEEEEEcCCCceee-eEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc
Q psy14886 156 IYSCTATNVHGMDES-KGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230 (505)
Q Consensus 156 ~y~C~~~~~~g~~~~-~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 230 (505)
.|+|.+.|..+.... .+.|.|.. +|.+. ..+....+..|+.+.|.|.+.+.+ +.+.|.|.+++..+.......
T Consensus 158 ~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~-~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~~w~~~~~~~~~~~~~~ 235 (292)
T 4dkd_C 158 DYQCSALMGGRKVMSISIRLKVQKVIPGPPALT-LVPAELVRIRGEAAQIVCSASSVD-VNFDVFLQHNNTKLAIPQQSD 235 (292)
T ss_dssp EEEEEECSTTSCEECCCEEEEEECCCCSSCEEE-EESSCBCCCSSSCEEEEEEEEESS-SCCEEECCBSSCCCCCCBEEE
T ss_pred EEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEE-ccCCceeEecCCCEEEEEEecCCC-CceEEEEeCCCcccccCccce
Confidence 999999988776644 57888876 44443 334455567899999999999766 456788998877654322111
Q ss_pred ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCC
Q psy14886 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281 (505)
Q Consensus 231 ~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~ 281 (505)
..... ......|.|.++..+|.|.|+|.|.|..|..+..+.|.|......
T Consensus 236 ~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~ 285 (292)
T 4dkd_C 236 FHNNR-YQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGN 285 (292)
T ss_dssp EETTE-EEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC------
T ss_pred eccce-eeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCCc
Confidence 11111 113358999999999999999999999999999999988766544
No 61
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.96 E-value=1.3e-28 Score=229.98 Aligned_cols=226 Identities=14% Similarity=0.126 Sum_probs=177.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|++++|.|.+.+.|.+.+.|+|++..+ .....+|.|.+++ .+|+|.|+|.+.+..+.....+.
T Consensus 108 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-------------~~~~~~L~i~~v~-~~d~G~Y~C~a~~~~~~~~~~~~ 173 (363)
T 1wio_A 108 LLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------------IQGGKTLSVSQLE-LQDSGTWTCTVLQNQKKVEFKID 173 (363)
T ss_dssp EESBSCEEEEEECCTTCCCCEEEECSSSCE-------------EEESSEEEECSBC-GGGCEECEEEEEETTEEEEECCE
T ss_pred EecCCCEEEEEEcCCCCCCeEEEEcCCCcc-------------cccceEEEEeeCC-hhcCCEEEEEEecCCCeEEEEEE
Confidence 358999999999988899999999986432 3357899999999 99999999999987666666677
Q ss_pred EEEEecCCCccCCCCCceEEeeCCCeEEEEeecCC-----CCCCeEEEEECCEEecC--------CCcEEEe--------
Q psy14886 81 LRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-----APKPKFVWKKDGNIIGS--------GGRRKIF-------- 139 (505)
Q Consensus 81 l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-----~p~~~i~W~~~g~~~~~--------~~~~~~~-------- 139 (505)
+.|.. +|.. +....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+.. +.+..+.
T Consensus 174 l~v~~-~p~~-----~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (363)
T 1wio_A 174 IVVLA-FQKA-----SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKL 247 (363)
T ss_dssp ECEEC-CSCS-----EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCC
T ss_pred EEEec-CCCC-----CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhh
Confidence 77774 3322 14567889999999998877 67889999999987765 3444432
Q ss_pred ---e--CCCEEEcCCCCCCCEEEEEEEEcC--CCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCe
Q psy14886 140 ---E--NGNLLISPVSRDDSGIYSCTATNV--HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 212 (505)
Q Consensus 140 ---~--~~~l~i~~v~~~d~G~y~C~~~~~--~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 212 (505)
. ...|.|.++..+|+|.|+|.|.|. .|.....+.|.|.. ..|..+.|.|.+.+.|.|.+
T Consensus 248 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~--------------v~g~~~~l~C~~~g~p~p~~ 313 (363)
T 1wio_A 248 QMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR--------------ATQLQKNLTCEVWGPTSPKL 313 (363)
T ss_dssp BCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE--------------ECCCSSSEEEEEESSCCTTC
T ss_pred hcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE--------------ecCCCeeEEEEEccccCCCc
Confidence 2 237999999999999999999999 89888888888751 12788999999999988887
Q ss_pred EEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 213 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 213 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
.+.|++++..+.. +..|.|..+..+|.|.|+|.|.|. |....+..+.|
T Consensus 314 ~i~W~~~~~~~~~--------------~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 314 MLSLKLENKEAKV--------------SKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp CEEEECSSSSCSE--------------EESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEE
T ss_pred cEEEEeCCCceee--------------eeeeeeeeeccccceeEEEEEecC-CeEEEecceEe
Confidence 7889999865542 234567888899999999999964 44444544444
No 62
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.96 E-value=3.1e-28 Score=233.87 Aligned_cols=297 Identities=19% Similarity=0.209 Sum_probs=185.5
Q ss_pred CCCCCceEEEEEEeccCC----CeEEEEECC--EECc---C--CCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEE
Q psy14886 1 MDNQADLTWTCEAFGVPD----VTYSWFRNG--ELLN---S--ETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQ 65 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~----~~~~W~~~~--~~l~---~--~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~ 65 (505)
|.+|++++|.|.+.+.+. +.+.|+|++ ..+. . .........|+... ..+|.|.+++ .+|+|.|+
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~ 91 (438)
T 1qgc_4 13 VSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE-ADDVATYY 91 (438)
T ss_dssp ECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC-GGGCEEEE
T ss_pred eeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc-CcCCeeEE
Confidence 468999999999988765 489999963 2221 0 00001123566553 2479999999 99999999
Q ss_pred EEEEcccCce-EeeEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEecCCCcE--EE
Q psy14886 66 CRAKNQLKTR-YSSAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSGGRR--KI 138 (505)
Q Consensus 66 C~~~~~~~~~-~~~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~~~~~~--~~ 138 (505)
|.+.|..+.. ...+.|.|.. .+|.+...+.. ....+|+.+.|.|.+.+ .|.+ .+.|+++|..+...... ..
T Consensus 92 C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 169 (438)
T 1qgc_4 92 CQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTD 169 (438)
T ss_dssp EEECSSTTCCBCCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEEC
T ss_pred EEEecCCCccccCceeEEecCCCCCCEEEecCCC--hhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceecccc
Confidence 9999877643 2345666653 23444332211 12346889999999977 5766 99999999988654111 11
Q ss_pred --------eeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCC
Q psy14886 139 --------FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 210 (505)
Q Consensus 139 --------~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 210 (505)
...+.|.|.++..+|+|.|+|.|.|..+.......+.+...+..+ ..+....+..|+.+.|.|.+.+.+.+
T Consensus 170 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~G~~v~L~C~~~g~p~~ 248 (438)
T 1qgc_4 170 QDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVML-VESGGGLVKPGGSLKLSCTASGFIFN 248 (438)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEE-EEECCEEECTTCCEEEEEEEESSCGG
T ss_pred ccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEE-ecCCceEEecCCcEEEEEEEcccccC
Confidence 112358999999999999999999988765333333221112222 22445678899999999999988744
Q ss_pred CeEEEEEeC--CEEecCC-------C-----CCcccCCeeeec----CCeEEEecCCCCCCEEEEEEEEecCC-----cE
Q psy14886 211 DVAYIWTHN--GVRIGNM-------D-----LNELETPNINID----GGLLEITNASFADAGEYECVVKSTVG-----KI 267 (505)
Q Consensus 211 ~~~~~w~~~--~~~~~~~-------~-----~~~~~~~~~~~~----~~~l~i~~~~~~~~g~y~C~~~n~~g-----~~ 267 (505)
...+.|+++ +..+... . ............ ...|.|.++..+|.|.|+|.|.|..+ ..
T Consensus 249 ~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~ 328 (438)
T 1qgc_4 249 RCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYW 328 (438)
T ss_dssp GSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSB
T ss_pred CcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceee
Confidence 456779875 4332110 0 000001111111 23799999999999999999998544 22
Q ss_pred EEEEEEEEcCCC-CCCCceEE----EEEeCCeEEEEeec
Q psy14886 268 STKTTVIVEGPP-GLPGGVQV----VEVHKTSATIQWTD 301 (505)
Q Consensus 268 ~~~~~l~v~~~p-~~p~~~~~----~~~~~~~v~l~w~~ 301 (505)
.....+.|...+ .+|..... ....+..++|.|..
T Consensus 329 ~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 367 (438)
T 1qgc_4 329 GQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLV 367 (438)
T ss_dssp CCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEE
T ss_pred CCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEe
Confidence 234566665422 22221111 11246788888884
No 63
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=2e-28 Score=225.35 Aligned_cols=260 Identities=14% Similarity=0.158 Sum_probs=167.1
Q ss_pred CCCCCceEEEEEEecc-CCCeEEEEECCEECcCC--CCCCCCCCcEEE---------ECCeEEEEcCCCCCCCeEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGV-PDVTYSWFRNGELLNSE--TLPLEDQDRYFI---------QDNVLTIRYLNPERDPAMYQCRA 68 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~-p~~~~~W~~~~~~l~~~--~~~~~~~~~~~~---------~~~~L~i~~~~~~~d~G~Y~C~~ 68 (505)
|.+|++++|.|.+.+. |.+.|.|+|++.++... ........|+.. ...+|.|.+++ .+|+|.|+|.+
T Consensus 15 v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a 93 (327)
T 2wng_A 15 VAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT-PADAGTYYCVK 93 (327)
T ss_dssp EETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC-GGGCEEEEEEE
T ss_pred EecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc-cccCeEEEEEe
Confidence 4689999999999886 88899999987543210 000001234442 34589999999 99999999999
Q ss_pred EcccCceE-----eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCC--eEEEEECCEEecCCCcEEEe--
Q psy14886 69 KNQLKTRY-----SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKIF-- 139 (505)
Q Consensus 69 ~~~~~~~~-----~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~--~i~W~~~g~~~~~~~~~~~~-- 139 (505)
.|..+... ..+.|.|...+....+.. +...+.+|+.+.|.|.+.+.|++ .+.|+++|..+.........
T Consensus 94 ~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~--~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~ 171 (327)
T 2wng_A 94 FRKGSPDTEFKSGAGTELSVRAKPSAPVVSG--PAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVG 171 (327)
T ss_dssp EESSTTCEEEEECCCEEEEEEBCCCCCEEEC--CSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSS
T ss_pred ecCCCcceeEeecCcEEEEEEecCCCceeec--cccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccccccccccc
Confidence 98765411 246777775332212211 22457899999999999988655 99999999988643322111
Q ss_pred e------CCCEEEcCCCCCCCEEEEEEEEcCCCce---eeeEEE--EEEeCCeeeeeCCCceEEEeeccEEEEEEeeecC
Q psy14886 140 E------NGNLLISPVSRDDSGIYSCTATNVHGMD---ESKGRL--IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 208 (505)
Q Consensus 140 ~------~~~l~i~~v~~~d~G~y~C~~~~~~g~~---~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~ 208 (505)
. ...|.|.....+|.|.|+|.|.|..+.. .....+ .+..+|.+...... +..|+.+.|.|.+.+.+
T Consensus 172 ~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~---~~~G~~v~l~C~~~g~~ 248 (327)
T 2wng_A 172 ESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP---VRAENQVNVTCQVRKFY 248 (327)
T ss_dssp CCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC---CSSTTCCEEEEEEEEEB
T ss_pred CCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC---cCCCCcEEEEEEEcccc
Confidence 1 1236676666777899999999987653 223333 23334444332211 56899999999999976
Q ss_pred CCCeEEEEEeCCEEecCCCCC---cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 209 LLDVAYIWTHNGVRIGNMDLN---ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 209 ~~~~~~~w~~~~~~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
++.+.+.|+++|..+...... ...... ......|.|..+..+|.|.|+|.|.|..|..
T Consensus 249 p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 249 PQRLQLTWLENGNVSRTETASTVTENKDGT-YNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp SSCEEEEEEETTEEEEEEECCSCEECTTSC-EEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred CCCcEEEEEECCeEccCcccCceEECCCCc-EEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 666788999999987542100 000000 0111357778888899999999999998864
No 64
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.95 E-value=1.3e-28 Score=245.42 Aligned_cols=352 Identities=16% Similarity=0.174 Sum_probs=224.4
Q ss_pred ceEEeeCCCeEEEEeecC-------CCCCCeEEEEECCEEecCCCcEEEe-eCCCEEEcCCCCCCCEEEEEEEEcCC--C
Q psy14886 97 SETYAGEGGNVTIFCNPE-------AAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVH--G 166 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~-------~~p~~~i~W~~~g~~~~~~~~~~~~-~~~~l~i~~v~~~d~G~y~C~~~~~~--g 166 (505)
.+..+..|++++|.|.+. +.+.+.|.|+++|..+.......+. ....|+|.++...|++ |+|.+.... .
T Consensus 11 ~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~~~~~~~~~~~l~i~~~~~~~~~-y~C~~~~~~~~~ 89 (589)
T 3l5h_A 11 ESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQ-LTCNILTFGQLE 89 (589)
T ss_dssp SCCCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGGCBCCSSSCCBCCCCCCCSSCCC-CCCC-CCTTCC-
T ss_pred CCCEEeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHHccccCCcEeEEEEecCCCccee-eEEecccCCCcc
Confidence 334588999999999987 5566799999999776543211111 1346889999888765 789886311 1
Q ss_pred ceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEE-------ecCCCCCcccCCeee-e
Q psy14886 167 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR-------IGNMDLNELETPNIN-I 238 (505)
Q Consensus 167 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~-------~~~~~~~~~~~~~~~-~ 238 (505)
.....+.|.+..+|.. ...|.|..... ..+.+.|...... +..... ........ .
T Consensus 90 ~~~~~~~l~v~~pP~~--------------P~nl~c~~~~~--~~~~~~W~~~~~~~~~~~y~l~~~~~-~~~~~~c~~~ 152 (589)
T 3l5h_A 90 QNVYGITIISGLPPEK--------------PKNLSCIVNEG--KKMRCEWDGGRETHLETNFTLKSEWA-THKFADCKAK 152 (589)
T ss_dssp CCCCCCCCCC-CCCCC--------------CEEEEEEEETT--SCEEEEEECCSCCSSCEEEEECCBCS-SSBCCCEECB
T ss_pred cEEEeEEEeccCCCCC--------------CEeeEEEECCC--ceEEEEECCCCcCCcCceEEEEEEEc-CCCcccCCCC
Confidence 1223344555444432 22333433322 1233334331100 000000 00000000 0
Q ss_pred --cCCeEEEe-cCCCCCCEEEEEEEEecCCcEE-EEEEEEE--cCCCCCCCceEE--EEEeCCeEEEEeecCCCCCCCCc
Q psy14886 239 --DGGLLEIT-NASFADAGEYECVVKSTVGKIS-TKTTVIV--EGPPGLPGGVQV--VEVHKTSATIQWTDGATNGRPIT 310 (505)
Q Consensus 239 --~~~~l~i~-~~~~~~~g~y~C~~~n~~g~~~-~~~~l~v--~~~p~~p~~~~~--~~~~~~~v~l~w~~~~~~~~~i~ 310 (505)
......+. .+.....+.|+|.|.|..|... ....+.+ ..+|.+|.++.+ .....+++.|+|++|...+.++.
T Consensus 153 ~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~ 232 (589)
T 3l5h_A 153 RDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIIL 232 (589)
T ss_dssp TTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCE
T ss_pred CCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeE
Confidence 11233344 4555667889999999999752 2233332 236889988888 34678899999999887677889
Q ss_pred eEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCC--ccCCCCCCCC
Q psy14886 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ--YNTPADKPYQ 388 (505)
Q Consensus 311 ~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~--~~t~~~~p~~ 388 (505)
.|.|+|+..+...|........ ......+...+|.|++.|.|+|+|.|..|.|.+|.++.. +.|.+..|..
T Consensus 233 ~Y~v~~~~~~~~~w~~~~~~~~-------~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~ 305 (589)
T 3l5h_A 233 KYNIQYRTKDASTWSQIPPEDT-------ASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSK 305 (589)
T ss_dssp EEEEEEEETTCSCCBCCCTTSS-------CSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCS
T ss_pred EEEEEECCCCCCCcEEEccccC-------cCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCC
Confidence 9999999988888876432110 122233344449999999999999999999888766533 5777788878
Q ss_pred CCceeeee----ccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEE
Q psy14886 389 APSRIGGG----GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464 (505)
Q Consensus 389 ~P~~~~~~----~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~ 464 (505)
+|..+... ....++|.|.|+++++.+.+|.|.+|+|+|+..+. .|.. .. . ....+. .|.+++.|.|+
T Consensus 306 ~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~-~~~~--~~--~--~~~~~~--~l~~~~~Y~~~ 376 (589)
T 3l5h_A 306 APSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKS-HLQN--YT--V--NATKLT--VNLTNDRYLAT 376 (589)
T ss_dssp CCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTS-CCCB--CC--C--SSSCCE--ECCCSSCCCEE
T ss_pred CCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCC-Ccee--ec--c--CCceEE--EEeCCCCEEEE
Confidence 89866543 45678999999998888999999999999987663 3321 11 1 112222 37789999999
Q ss_pred EEEecCCCCCCCCceEEE
Q psy14886 465 VQAINDVGPGPESEVVTI 482 (505)
Q Consensus 465 v~a~n~~G~g~~s~~~~~ 482 (505)
|.|+|.+|.|+++.....
T Consensus 377 V~A~n~~G~~~~s~~~~~ 394 (589)
T 3l5h_A 377 LTVRNLVGKSDAAVLTIP 394 (589)
T ss_dssp EEEEBTTBCCCCCCCCCC
T ss_pred EEEEeCCccCCCeEEEee
Confidence 999999999999976554
No 65
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=9.9e-28 Score=216.73 Aligned_cols=257 Identities=16% Similarity=0.199 Sum_probs=168.1
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE-----ECCeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-----QDNVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
|.+|++++|.|.+.+. ++|+|++..+. .+... ..++|.|.+++ .+|+|.|+|.+.|..|..
T Consensus 12 v~~G~~v~L~C~~~~~----v~W~~~~~~~~---------~~~~~~~~~~~~~~L~i~~~~-~~D~G~Y~C~a~n~~g~~ 77 (289)
T 3mjg_X 12 LNVSSTFVLTCSGSAP----VVWERMSQEPP---------QEMAKAQDGTFSSVLTLTNLT-GLDTGEYFCTHNDSRGLE 77 (289)
T ss_dssp CCTTCCEEEEEEESSC----CEEEBTTBCCS---------EEEEECTTSCEEEEEEECSCC-GGGCEEEEEECCC-----
T ss_pred EeCCCcEEEEEeccce----EEEECCCCCcc---------cceeccCCCceeEEEEEccCC-hhhCEEEEEEEcccCCCC
Confidence 5789999999999874 99999998763 12222 13589999999 999999999999887652
Q ss_pred -EeeEEEEEEecCCCccCCCCCce---EEeeCCCeEEEEeecCCCCCCeEEEEECC--EEecCCCcEEEeeCCCEEEcCC
Q psy14886 76 -YSSAQLRVLTLKPSFKKRPLESE---TYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPV 149 (505)
Q Consensus 76 -~~~~~l~v~~~~p~~~~~~~~~~---~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~~~~~~~~~~~~~~~~l~i~~v 149 (505)
.....+.|....|.....+.... ..+.+|+.+.|.|.+. .|.+.+.|++++ ..+.. . ......+.
T Consensus 78 ~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~--~--~~~~~~~~---- 148 (289)
T 3mjg_X 78 TDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV--P--YDHQRGFS---- 148 (289)
T ss_dssp -CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC--C--EETTTEEE----
T ss_pred cCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce--e--ecCCcCee----
Confidence 22344444432232222221222 6789999999999998 677889998864 22221 1 11111121
Q ss_pred CCCCCEEEEEEEEcCCCceeee-EEEEEEe-CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCC
Q psy14886 150 SRDDSGIYSCTATNVHGMDESK-GRLIVLH-GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227 (505)
Q Consensus 150 ~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~-~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~ 227 (505)
...|+|.|+|.|.+..+..... ..+.|.. .++.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++.......
T Consensus 149 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p--~v~W~~~~~~~~~~~ 226 (289)
T 3mjg_X 149 GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVV--NFEWTYPRKESGRLV 226 (289)
T ss_dssp ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSB--EEEEECTTSSSSCCC
T ss_pred eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCc--ceEEEcCCccCCCcc
Confidence 3579999999999876655443 5566654 22323333344678899999999999987654 677997665432211
Q ss_pred CCccc--CCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCC
Q psy14886 228 LNELE--TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 282 (505)
Q Consensus 228 ~~~~~--~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p 282 (505)
..... ..........|.|..+..+|.|.|+|.|.|..|....+..|.+...|...
T Consensus 227 ~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~ 283 (289)
T 3mjg_X 227 EPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESGH 283 (289)
T ss_dssp CCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC---
T ss_pred cccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecCc
Confidence 00000 00001123689999999999999999999999999999999998766543
No 66
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.95 E-value=4.8e-27 Score=214.03 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=180.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE---ECC--eEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI---QDN--VLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~---~~~--~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+.. ...++.+ .++ +|.|.+++ .+|+|.|+|.+.|..|..
T Consensus 16 v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~------~~~~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~n~~g~~ 88 (305)
T 2nzi_A 16 VRYQSNATLVCKVTGHPKPIVKWYRQGKEIIA------DGLKYRIQEFKGGYHQLIIASVT-DDDATVYQVRATNQGGSV 88 (305)
T ss_dssp ECTTCCEEEEEEEECSSCCEEEEEETTEECCC------CSSSEEEEEETTTEEEEEESSCC-GGGCSEEEEEEEETTEEE
T ss_pred EeCCCcEEEEEEEeCCCCCeEEEEECCEEccc------CCCeEEEEECCCCEEEEEEccCC-hhhCeEEEEEEEcCCCCc
Confidence 46899999999999999999999999998873 2234433 223 89999999 999999999999998887
Q ss_pred EeeEEEEEEecCCCccCCC---CCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeC---CCEEEcC-
Q psy14886 76 YSSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISP- 148 (505)
Q Consensus 76 ~~~~~l~v~~~~p~~~~~~---~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~---~~l~i~~- 148 (505)
...+.|.|.. +|.+.... ......+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+... ..|.|.+
T Consensus 89 ~~~~~l~V~~-~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 167 (305)
T 2nzi_A 89 SGTASLEVEV-PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNG 167 (305)
T ss_dssp EEEEEEEECE-EEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTC
T ss_pred cceEEEEEec-CCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecC
Confidence 7788888875 33332211 11346688999999999999999999999999988876666655432 4699999
Q ss_pred CCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCC
Q psy14886 149 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228 (505)
Q Consensus 149 v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~ 228 (505)
+...|.|.|+|.|.|..|.....+.|.|...|...... ......+..+.|.|.............+...........+
T Consensus 168 ~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~--~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w 245 (305)
T 2nzi_A 168 VERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGV--KVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERW 245 (305)
T ss_dssp CCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEE--EEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCE
T ss_pred CccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCc--eeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCcc
Confidence 99999999999999999999888999988765432210 1111345677788875322111111111111111111111
Q ss_pred CcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE
Q psy14886 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268 (505)
Q Consensus 229 ~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~ 268 (505)
. .........+.|.++...+.|.|+|.|.|..|...
T Consensus 246 ~----~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~ 281 (305)
T 2nzi_A 246 L----RVGQARETRYTVINLFGKTSYQFRVIAENKFGLSK 281 (305)
T ss_dssp E----EEEEESSSEEEECSCCSSCEEEEEEEEEETTEECC
T ss_pred E----ECccccCceEEecCCCCCCeEEEEEEEEeCCcccC
Confidence 0 00111256899999999999999999999999754
No 67
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=7.1e-28 Score=220.45 Aligned_cols=258 Identities=16% Similarity=0.181 Sum_probs=165.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC-----ce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK-----TR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~-----~~ 75 (505)
|.+|++++|.|.+.+. .+.+.|+|+|..+.. ........+.|.|.+++ .+|+|.|+|.+.+..+ ..
T Consensus 35 v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~-------~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~~~~~~~~~~~~ 105 (316)
T 3vh8_G 35 VPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIP-------IFHGRIFQESFNMSPVT-TAHAGNYTCRGSHPHSPTGWSAP 105 (316)
T ss_dssp EETTSCEEEEEEBTTB-CCSEEEEESSCSSSC-------HHHHCCBSSCEEECSCC-GGGCEEEEEEEBCSSSSSSBCCC
T ss_pred cCCCCCEEEEEEccCC-CceEEEEeCCCccce-------eecCCcceEEEEECCCC-cccCeEEEEEEEcCCCCcceecC
Confidence 4689999999999876 688999999987642 11112246789999999 9999999999986322 23
Q ss_pred EeeEEEEEEecC--CCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEE----eeCCCEEEcCC
Q psy14886 76 YSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI----FENGNLLISPV 149 (505)
Q Consensus 76 ~~~~~l~v~~~~--p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~----~~~~~l~i~~v 149 (505)
...+.|.|...+ |.+...+ . ..+.+|++++|.|.+. .+.+.+.|+++|..+........ ...+.|.|.++
T Consensus 106 s~~~~l~V~~~~~~p~~~~~~--~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v 181 (316)
T 3vh8_G 106 SNPVVIMVTGNHRKPSLLAHP--G-PLVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPM 181 (316)
T ss_dssp CCCEEEEEECSSCCCEEEEES--C-SEEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSC
T ss_pred CCcEEEEEecCCCCCeEEecC--C-CccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCC
Confidence 335667776432 3333322 2 2378999999999995 45669999999877643211111 12346999999
Q ss_pred CCCCCEEEEEEEEcCCCce-----eeeEEEEEEeC--CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEE
Q psy14886 150 SRDDSGIYSCTATNVHGMD-----ESKGRLIVLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 222 (505)
Q Consensus 150 ~~~d~G~y~C~~~~~~g~~-----~~~~~l~v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~ 222 (505)
..+|+|.|+|.|.|..|.. .....|.|... ++.+...+ ...+..|+.++|.|.+.. + ...+.|+++|..
T Consensus 182 ~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~-~--~~~~~W~k~g~~ 257 (316)
T 3vh8_G 182 MLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQP-GPKVQAGESVTLSCSSRS-S--YDMYHLSREGGA 257 (316)
T ss_dssp CGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEES-CSCCCTTSCCEEEEEESS-C--CSEEEEEETTSS
T ss_pred ChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCC-CCeecCCCcEEEEEECCC-C--CcEEEEEECCCc
Confidence 9999999999999987742 34466777542 22222222 235678999999999873 3 347889998865
Q ss_pred ecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc-----EEEEEEEEEcCCC
Q psy14886 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK-----ISTKTTVIVEGPP 279 (505)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~-----~~~~~~l~v~~~p 279 (505)
+........ .........|.|..+. |.|.|+|.+.|..+. .+..+.|.|.++|
T Consensus 258 ~~~~~~~~~--~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 258 HERRLPAVR--KVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp CCEEEECEE--CTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred CCCceecee--ccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 532110000 0000012478888888 999999999997663 3455666666554
No 68
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.95 E-value=1.5e-27 Score=246.03 Aligned_cols=282 Identities=16% Similarity=0.156 Sum_probs=118.1
Q ss_pred CCC--CceEEEEEEeccCCCeEEEEEC--CEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEe
Q psy14886 2 DNQ--ADLTWTCEAFGVPDVTYSWFRN--GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77 (505)
Q Consensus 2 ~~G--~~~~l~C~~~~~p~~~~~W~~~--~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~ 77 (505)
.+| +.++|.|.+.+ |.+.++|+|+ +..+... ...........|.|.+++ .+|+|.|+|.+.+......+
T Consensus 139 ~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~-----~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~~~~~~~~~~s 211 (772)
T 3v2a_R 139 TENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPD-----GNRISWDSKKGFTIPSYM-ISYAGMVFCEAKINDESYQS 211 (772)
T ss_dssp ESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCC-----SSSCEEETTTEEEEEGGG-TTTCSEEEEEEEETTEEEEC
T ss_pred ecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCC-----CceeecCCCCCeEecCCC-hhhCeEEEEEEEECCceEEE
Confidence 468 88999999976 7789999997 6655421 111222345789999999 99999999999875443333
Q ss_pred e-EEEEEEec-CCCccCCCCCceEEeeCCCeEEEEeecCC--CCCCeEEEEECCEEecCCCcEE-----------EeeCC
Q psy14886 78 S-AQLRVLTL-KPSFKKRPLESETYAGEGGNVTIFCNPEA--APKPKFVWKKDGNIIGSGGRRK-----------IFENG 142 (505)
Q Consensus 78 ~-~~l~v~~~-~p~~~~~~~~~~~~v~~g~~v~l~C~~~~--~p~~~i~W~~~g~~~~~~~~~~-----------~~~~~ 142 (505)
. ..+.+... ++.+.+.+ .....+.+|++++|.|.+.+ .+.+.+.|++++..+....... .....
T Consensus 212 ~~~~~~v~~~~~~~v~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (772)
T 3v2a_R 212 IMYIVVVVGYRIYDVVLSP-SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLS 290 (772)
T ss_dssp CEEEEEEECCCEEEEEEEC-CSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEE
T ss_pred EEEEEEEecCccceeeeCC-CCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEE
Confidence 3 33333321 12222322 23357899999999999976 4466999999988754322211 11234
Q ss_pred CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeC--CCceEEEeeccEEEEEEeeecCCCCeEEEEEeCC
Q psy14886 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL--PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220 (505)
Q Consensus 143 ~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~ 220 (505)
.|.|.++..+|+|.|+|.+.|..+.....+.|.|..+|.+.... .....+..|+.+.|.|.+.+.|.+ .+.|+++|
T Consensus 291 ~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~g 368 (772)
T 3v2a_R 291 TLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPP--EIKWYKNG 368 (772)
T ss_dssp EEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-----------------------------------------
T ss_pred EEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCC--eEEEEECC
Confidence 69999999999999999999998888888889998776554322 234567889999999999987765 45699998
Q ss_pred EEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcE--EEEEEEEEcCCCCCCCc----eEEEEEeCCe
Q psy14886 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGPPGLPGG----VQVVEVHKTS 294 (505)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~--~~~~~l~v~~~p~~p~~----~~~~~~~~~~ 294 (505)
..+.... .. .....|.|..+..+|.|.|+|.|.|..|.. +..+.|.|..+|..... .......+..
T Consensus 369 ~~l~~~~-------~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~ 440 (772)
T 3v2a_R 369 IPLESNH-------TI-KAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTT 440 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeCCCCc-------eE-ccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCc
Confidence 8775421 11 134689999999999999999999998865 44566777766654321 1011345667
Q ss_pred EEEEeec
Q psy14886 295 ATIQWTD 301 (505)
Q Consensus 295 v~l~w~~ 301 (505)
+.|.|..
T Consensus 441 ~~l~C~~ 447 (772)
T 3v2a_R 441 QTLTCTV 447 (772)
T ss_dssp -------
T ss_pred EEEEeEe
Confidence 7888874
No 69
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.94 E-value=1.4e-25 Score=212.35 Aligned_cols=272 Identities=14% Similarity=0.114 Sum_probs=196.6
Q ss_pred eCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecC
Q psy14886 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 264 (505)
Q Consensus 185 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~ 264 (505)
..|....+..|++++|.|.+. . + .+.|.++|..+... ........|.|.++...|.|.|.|.+.+ .
T Consensus 208 v~P~~~~v~~Gs~vtl~C~a~-~--~--~I~W~~ng~~i~~~--------ri~~~~~~L~I~nl~~sd~g~y~~~C~~-~ 273 (488)
T 2q7n_A 208 VFPQDKVVLAGSNMTICCMSP-T--K--VLSGQIGNTLRPLI--------HLYGQTVAIHILNIPVSENSGTNIIFIT-D 273 (488)
T ss_dssp EECTTCEEESSCCCEEEECCS-S--C--EEEEEETTEECCCE--------ECSSSCEEEECCSCCCCCSSCEEEEEEE-S
T ss_pred ECCCCCEEcCCCCEEEEEECC-C--C--EEEEEECCEECchh--------hccceEEEEEEeCCCcccCCcEEEEEEc-C
Confidence 446667789999999999987 2 2 67799999776442 1222345788999998888888777663 2
Q ss_pred CcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCC---CCCceEEEEEEeCCCC-CeEEeeeccccceeeeec
Q psy14886 265 GKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG---RPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYT 340 (505)
Q Consensus 265 g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~---~~i~~y~v~~~~~~~~-~w~~~~~~~~~~~~~~~~ 340 (505)
+ ......+.+..+|.+|.++.+.......++++|.++.+.+ .++..|.+.|+..+.. .|..... ..
T Consensus 274 ~-~i~~~~l~v~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~---------~~ 343 (488)
T 2q7n_A 274 D-DVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEG---------LT 343 (488)
T ss_dssp S-CEEEEEEEEECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSC---------CC
T ss_pred C-eEEEEEEEeeCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccc---------cC
Confidence 3 3346788888999999999998888899999999987653 4678999998765321 2221110 00
Q ss_pred CceeeEEeeeccC-CceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCC
Q psy14886 341 GRKEASIENVLVP-WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419 (505)
Q Consensus 341 ~~~~~~~~~~L~~-~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i 419 (505)
+........ +.+ .+.|.|+|.|.|..|.++ +. ..+.+....++.||.++++...+.+++.|+|++| ...++.+
T Consensus 344 ~~~~~ct~~-l~~~~t~Y~f~V~A~N~~G~~~-S~--~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP--~~~~g~~ 417 (488)
T 2q7n_A 344 NETYRLGVQ-MHPGQEIHNFTLTGRNPLGQAQ-SA--VVINVTERVAPHDPTSLKVKDINSTVVTFSWYLP--GNFTKIN 417 (488)
T ss_dssp SSCEEEEEE-CCSSCCCCEEEEEEEETTEEEE-EE--EECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEE--EECSSSE
T ss_pred CceEEEEEc-CCCCccEEEEEEEEEeCCCCcc-ce--EEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCC--CCCCCcc
Confidence 122223344 555 599999999999999954 32 2455556677889999999888889999999994 4457889
Q ss_pred ceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCC---CCCCceEEEeecce
Q psy14886 420 IYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHDPL 487 (505)
Q Consensus 420 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~---g~~s~~~~~~t~p~ 487 (505)
+.|.|+|+..+...|...............+.|.+|.|++.|.|+|+|.| .|. |++|+.+.+.|.+.
T Consensus 418 l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 418 LLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCCC
T ss_pred eEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCCC
Confidence 99999999988666643221111112233448999999999999999999 888 57787777877653
No 70
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.94 E-value=6.8e-27 Score=224.47 Aligned_cols=263 Identities=14% Similarity=0.209 Sum_probs=172.4
Q ss_pred CCCceEEEEEEec-cCCC-eEEEEECCEECcCCC-----CCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 3 NQADLTWTCEAFG-VPDV-TYSWFRNGELLNSET-----LPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 3 ~G~~~~l~C~~~~-~p~~-~~~W~~~~~~l~~~~-----~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
+|+.++|.|.+.+ .|.+ .|+|+|+|.++.... ......+.+. ..+.|.|.+++ .+|+|.|+|.|.|..+..
T Consensus 130 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~-~~d~G~Y~C~a~n~~~~~ 207 (438)
T 1qgc_4 130 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYS-MSSTLTLTKDE-YERHNSYTCEATHKTSTS 207 (438)
T ss_dssp HTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEE-EEEEEEEEHHH-HHTCCEEEEEEEETTCSS
T ss_pred cCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEE-EEEEEEEeCcc-cCCCCeEEEEEEecccCC
Confidence 3789999999987 6766 999999999886430 0001112222 24589999999 999999999999987764
Q ss_pred EeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEec-----------------CCC
Q psy14886 76 YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG-----------------SGG 134 (505)
Q Consensus 76 ~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~~-----------------~~~ 134 (505)
. +.+.+....+.+.+.. +....+.+|++++|.|.+.+.| .+.+.|+++ +..+. ...
T Consensus 208 ~--~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 284 (438)
T 1qgc_4 208 P--IVKSFNRNECEVMLVE-SGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKG 284 (438)
T ss_dssp C--EEEEEETTC-CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTT
T ss_pred c--eecccccccceeEEec-CCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCC
Confidence 2 2333332112111111 2345689999999999999887 679999996 44321 124
Q ss_pred cEEEeeC-----CCEEEcCCCCCCCEEEEEEEEcCCC-----ceeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEE
Q psy14886 135 RRKIFEN-----GNLLISPVSRDDSGIYSCTATNVHG-----MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQL 200 (505)
Q Consensus 135 ~~~~~~~-----~~l~i~~v~~~d~G~y~C~~~~~~g-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l 200 (505)
++.+..+ ..|.|.+++.+|+|.|+|.|.|..+ .......+.|.. +|.+... ++...+..|+.+.|
T Consensus 285 r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L 363 (438)
T 1qgc_4 285 RFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPL-APGSAAAAASMVTL 363 (438)
T ss_dssp TEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEE-CCCGGGCCSSEEEE
T ss_pred cEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEc-CcccccccCCcEEE
Confidence 4444432 2699999999999999999998443 222345677753 3333322 22334567999999
Q ss_pred EEEeeec-CCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEE
Q psy14886 201 RCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273 (505)
Q Consensus 201 ~C~~~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l 273 (505)
.|.+.+. |. .+.+.|++++..+.................+.|.|.....+| |.|+|.|.|..|.......+
T Consensus 364 ~C~~~g~~P~-~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 364 GCLVKGYFPE-PVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp EEEEESCBSS-CCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEeccccCC-CcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 9999987 44 357889998876542110000000111112367888877778 99999999999986655443
No 71
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.94 E-value=5.4e-25 Score=189.07 Aligned_cols=205 Identities=16% Similarity=0.207 Sum_probs=158.7
Q ss_pred CCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCC-CCeEEeeeccccceee--eecCceeeEEeeeccCCc
Q psy14886 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVD--RYTGRKEASIENVLVPWS 355 (505)
Q Consensus 279 p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~-~~w~~~~~~~~~~~~~--~~~~~~~~~~~~~L~~~~ 355 (505)
+.+|..+.+..++.+++.|+|+++...++++.+|.|+++..+. ..|......+...... ........+.+.+|.+++
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 81 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH 81 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTC
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCC
Confidence 4567778888899999999999998777899999999998754 7888765432210000 000122333444599999
Q ss_pred eeEEEEEEEcCCCcCCCCCCCCCccCCC---CCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCC-
Q psy14886 356 TYEFKVIAGNELGYGEPSSPSPQYNTPA---DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND- 431 (505)
Q Consensus 356 ~y~~~v~a~n~~G~~~~s~~~~~~~t~~---~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~- 431 (505)
.|.|+|.|.|..|.+..+.....+.+.. ..++.+|.++.+...+.++|.|.|++++ .+.++.+.+|.|+|+..+.
T Consensus 82 ~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~~ 160 (214)
T 2ibg_A 82 TYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSSSA 160 (214)
T ss_dssp EEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETTCC
T ss_pred EEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCC-ccCCCCcceEEEEEEECCCC
Confidence 9999999999999987777554444443 3455678999998888999999999954 5788999999999999885
Q ss_pred CCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 432 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
..|........ ....+.|.+|.|++.|.|+|+|+|..|.|++|+.+.++|..+
T Consensus 161 ~~~~~~~~~~~---~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~p 213 (214)
T 2ibg_A 161 GEYFKATIEGA---HARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRP 213 (214)
T ss_dssp SCCEEEEEECT---TCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCC
T ss_pred cceEEeeccCC---cceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecCC
Confidence 67886655431 235788999999999999999999999999999999998754
No 72
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.94 E-value=3e-25 Score=190.04 Aligned_cols=196 Identities=21% Similarity=0.217 Sum_probs=151.6
Q ss_pred CCCCCCCceEEEEEeCCeEEEEeecCCCC----CCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeecc
Q psy14886 277 GPPGLPGGVQVVEVHKTSATIQWTDGATN----GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352 (505)
Q Consensus 277 ~~p~~p~~~~~~~~~~~~v~l~w~~~~~~----~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 352 (505)
.|+.+|.++.+.....+++.|+|++|... +.++.+|.|+|+..+...|....... ....+.+.+ |.
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---------~~~~~~i~~-L~ 72 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANA---------TTLSYLVTG-LK 72 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEE---------SSSEEEECS-CC
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCC---------CceEEEecC-cC
Confidence 46778999999999999999999987532 57789999999887544332211111 223455555 99
Q ss_pred CCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeecc--ccccEEEEEEeCCccccCCCCceEEEEEEEcC
Q psy14886 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG--KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 430 (505)
Q Consensus 353 ~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~--~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~ 430 (505)
|++.|.|+|+|.|..|.+.+|... .+.|.+..|+.+|.++.+... +.++|.|.|++ +.+.+|.+.+|.|+|+..+
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~-~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~ 149 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTA-HGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQP--PSEANGKITGYIIYYSTDV 149 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCE-EEECCCCCCCSCCEEEEEEEETTEEEEEEEEEEC--CTTCCSCCCEEEEEEESCT
T ss_pred CCCEEEEEEEEEcCCCCCccceeE-eeecccCCCCCCCcceEEEecCCCCCEEEEEECC--CCCCCCCEEEEEEEEEECC
Confidence 999999999999999999888764 678888888889999998766 47899999998 4568889999999999876
Q ss_pred CC---CcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecceEE
Q psy14886 431 DT---EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPLVI 489 (505)
Q Consensus 431 ~~---~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~~~ 489 (505)
.. .|....... ..+.+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.+.+...-+
T Consensus 150 ~~~~~~~~~~~~~~----~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~~~~ 207 (211)
T 3p4l_A 150 NAEIHDWVIEPVVG----NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAHH 207 (211)
T ss_dssp TSCGGGSEEEEEES----SCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC----
T ss_pred CCCCCceEEEEecC----CeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCccccc
Confidence 43 344333332 34678999999999999999999999999999999998865443
No 73
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.94 E-value=2.6e-25 Score=190.18 Aligned_cols=201 Identities=23% Similarity=0.259 Sum_probs=154.9
Q ss_pred EEEcCCCCCCCceEEEEEeCCeEEEEeecCCCC-CCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeec
Q psy14886 273 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN-GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL 351 (505)
Q Consensus 273 l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~-~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L 351 (505)
+....+|.+|.++.+..... ++.|+|+++... +.++.+|.|+|+..+...|......... ......+.+.+ |
T Consensus 3 l~~~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~-L 75 (209)
T 2vkw_A 3 LAQADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE-----ASMEGIVTIVG-L 75 (209)
T ss_dssp --CCCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHH-----HHHHSEEEECC-C
T ss_pred ccccCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccC-----CCccceEEeCC-C
Confidence 44567899999999877776 699999998754 4569999999999888888775432110 00122444544 9
Q ss_pred cCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCC
Q psy14886 352 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 431 (505)
Q Consensus 352 ~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~ 431 (505)
.|++.|.|+|+|.|..|.|.++... .+.|.+..+|.+|.++.+...+.++|.|.|++ +.+.+++|.+|.|+|+. +.
T Consensus 76 ~p~t~Y~~~V~A~n~~G~~~~s~~~-~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~-~~ 151 (209)
T 2vkw_A 76 KPETTYAVRLAALNGKGLGEISAAS-EFKTQPVREPSAPKLEGQMGEDGNSIKVNLIK--QDDGGSPIRHYLVRYRA-LS 151 (209)
T ss_dssp CTTCEEEEEEEEEETTEECCCCCCE-EEECCCSCSCCCCEEEEEECTTSSCEEEEEEC--CCCTTSCCCEEEEEEEE-TT
T ss_pred CCCCeEEEEEEEEcCCcccCCcccc-cccccCCCCCCCCcccccccccCCeEEEEEEC--cccCCCCCceEEEEEEC-CC
Confidence 9999999999999999999888764 46666664667888888888889999999998 47889999999999999 54
Q ss_pred CCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 432 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
..|....... ...+.+.|.+|.|++.|.|+|+|+|.+|.|++|+++.+.+.-.
T Consensus 152 ~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~~~~ 204 (209)
T 2vkw_A 152 SEWKPEIRLP---SGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAAAH 204 (209)
T ss_dssp SCCCCCEEEC---TTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC---
T ss_pred CCCceeeecC---CCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhhhhh
Confidence 5565433221 1335788999999999999999999999999999998876543
No 74
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.93 E-value=7.3e-24 Score=190.82 Aligned_cols=264 Identities=21% Similarity=0.326 Sum_probs=190.9
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEee---CCCEEEcCCCCCCCEEEEEEEEc
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRDDSGIYSCTATN 163 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~---~~~l~i~~v~~~d~G~y~C~~~~ 163 (505)
+|.+...+ ....+.+|+.++|.|.+.+.|.+.+.|+++|..+....++.... ...|.|.+++..|+|.|+|.+.|
T Consensus 5 pP~~~~~p--~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 5 PPFFDLKP--VSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCEEEECC--CCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEccc--cceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 56665554 45678999999999999999889999999999987766554432 24699999999999999999999
Q ss_pred CCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeE
Q psy14886 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243 (505)
Q Consensus 164 ~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (505)
..|.....+.|.|..+|.+.........+..|+.+.|.|.+.+.|.+ .+.|++++..+....... .........|
T Consensus 83 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~~~~---~~~~~~~~~L 157 (284)
T 2rik_A 83 VAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEI--KVLWYKDETEIQESSKFR---MSFVESVAVL 157 (284)
T ss_dssp TTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCC--EEEEEETTEECCCSSSEE---EEEETTEEEE
T ss_pred CCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCC--EEEEEECCEECcCCCcEE---EEEcCCEEEE
Confidence 99888888999998888877665566678899999999999887654 677999998876532100 1111234579
Q ss_pred EEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCce-EEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeC---
Q psy14886 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV-QVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--- 319 (505)
Q Consensus 244 ~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~-~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~--- 319 (505)
.|..+..+|.|.|+|.|.|..|.....+.|.|..+|...... ......+..+.|.|... +.|...+.|.....
T Consensus 158 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~---g~p~~~v~W~~~~~~~~ 234 (284)
T 2rik_A 158 EMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQ---GTPPFQVSWHKDKRELR 234 (284)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECB---SSSCCEEEEEETTEEEC
T ss_pred EECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEE---ecCCCEEEEEECCEECc
Confidence 999999999999999999999999999999998877543222 12344677899999842 33333344332110
Q ss_pred CCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 320 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 320 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
........ .......+.+.+ +...+.+.|+|.|.|..|...
T Consensus 235 ~~~~~~~~----------~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 275 (284)
T 2rik_A 235 SGKKYKIM----------SENFLTSIHILN-VDSADIGEYQCKASNDVGSYT 275 (284)
T ss_dssp BTTTEEEE----------EETTEEEEEECS-CCGGGCEEEEEEEEETTEEEE
T ss_pred CCCCEEEE----------EcCCEEEEEEcC-CCcccCEEEEEEEEeCCCcee
Confidence 00111100 001112344444 889999999999999999753
No 75
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.93 E-value=2.6e-24 Score=208.18 Aligned_cols=268 Identities=14% Similarity=0.174 Sum_probs=164.8
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc-------CC---CCCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN-------SE---TLPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~-------~~---~~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ ...+.|+|+. ..+. .. .......+|+.+. ..+|.|.+++ .+|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 91 (475)
T 1iga_A 13 KKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLR-PED 91 (475)
T ss_pred EeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCC-hhh
Confidence 46899999999998754 5789999953 2110 00 0001124566653 2489999999 999
Q ss_pred CeEEEEEEEcccCc------eEeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-C-eEEEEECCE
Q psy14886 61 PAMYQCRAKNQLKT------RYSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-P-KFVWKKDGN 128 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~------~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~-~i~W~~~g~ 128 (505)
+|.|.|.+.+..+. ....+.|.|... +|.+.... .. .+.+|+.++|.|.+.|. |. + .|.|++++.
T Consensus 92 ~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~--~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~ 168 (475)
T 1iga_A 92 TAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS-LC--STQPDGNVVIACLVQGFFPQEPLSVTWSESGQ 168 (475)
T ss_pred CEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC-cc--ccCCCCeEEEEEEEeeecCCCceEEEEcCCCc
Confidence 99999999987652 123456777631 23333221 11 23689999999999987 65 4 999999875
Q ss_pred EecCC--CcE------EEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce-eeeEEEEEE------------------eCCe
Q psy14886 129 IIGSG--GRR------KIFENGNLLISPVSRDDSGIYSCTATNVHGMD-ESKGRLIVL------------------HGPS 181 (505)
Q Consensus 129 ~~~~~--~~~------~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~-~~~~~l~v~------------------~~p~ 181 (505)
..... ... .......|.|..+...|+|.|+|.|.|..+.. ...+.+.|. ..|.
T Consensus 169 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~ 248 (475)
T 1iga_A 169 GVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPR 248 (475)
T ss_pred ccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcE
Confidence 32110 000 00111247888888899999999999987642 122332221 1222
Q ss_pred eeeeCCCceEEEeeccEEEEEEeeecCC-CCeEEEEEeCCEEecCCC-CCc-ccCCeeeecCCeEEEecCCCCCCEEEEE
Q psy14886 182 YYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHNGVRIGNMD-LNE-LETPNINIDGGLLEITNASFADAGEYEC 258 (505)
Q Consensus 182 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~~~~~~~-~~~-~~~~~~~~~~~~l~i~~~~~~~~g~y~C 258 (505)
+....+....+..|+.+.|.|.+.+.++ ..+.+.| ++..+.... ... ..........+.|.|..+..+|.|.|+|
T Consensus 249 v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C 326 (475)
T 1iga_A 249 LSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTC 326 (475)
T ss_pred EEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEE
Confidence 2222222333578999999999997643 1257889 333332211 000 0000011134578999999999999999
Q ss_pred EEEecCCcEEEEEEEE
Q psy14886 259 VVKSTVGKISTKTTVI 274 (505)
Q Consensus 259 ~~~n~~g~~~~~~~l~ 274 (505)
.|.|..|.......+.
T Consensus 327 ~a~n~~~~~~~~~~v~ 342 (475)
T 1iga_A 327 TAAYPESKTPLTATLS 342 (475)
T ss_pred EEEcCCCCCceEEEee
Confidence 9999988764444443
No 76
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.93 E-value=5.5e-26 Score=218.27 Aligned_cols=263 Identities=17% Similarity=0.226 Sum_probs=170.1
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc---C----C---CCCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN---S----E---TLPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~---~----~---~~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ ...+.|+|++ ..+. . . .......+|+.+. ..+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 90 (444)
T 1igt_B 12 VQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLK-SED 90 (444)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred EcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCC-HHH
Confidence 46899999999998754 5789999852 2210 0 0 0000123577653 2489999999 999
Q ss_pred CeEEEEEEEcccCce---EeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecC
Q psy14886 61 PAMYQCRAKNQLKTR---YSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGS 132 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~---~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~ 132 (505)
+|.|+|.+.+..+.. ...+.|.|... +|.+...... ..+.+|+.+.|.|.+.|. |.+ .+.|++++..+..
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~ 168 (444)
T 1igt_B 91 TAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGV 168 (444)
T ss_dssp CEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCC--SSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred CEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEeccc--ccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCe
Confidence 999999999865441 12456666631 2332221111 124789999999999885 766 9999998875311
Q ss_pred --CCcE----EEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEE------------------eCCeeeeeCCC
Q psy14886 133 --GGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL------------------HGPSYYEQLPP 188 (505)
Q Consensus 133 --~~~~----~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~------------------~~p~~~~~~~~ 188 (505)
.... .....+.|.|.++..+| |.|+|.|.|..+.......+.+. .+|.+....+.
T Consensus 169 ~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~ 247 (444)
T 1igt_B 169 HTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPK 247 (444)
T ss_dssp EECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCC
T ss_pred EecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCc
Confidence 1110 11112458899999889 99999999998876444443321 12333233232
Q ss_pred ceE-EEeeccEEEEEEeeecC--CCCeEEEEEeCCEEecCCCCCcc--cCCeeeecCCeEEEecCCCCCCEEEEEEEEec
Q psy14886 189 KIT-IAAHRNLQLRCSAHTEE--LLDVAYIWTHNGVRIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKST 263 (505)
Q Consensus 189 ~~~-~~~g~~~~l~C~~~~~~--~~~~~~~w~~~~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~ 263 (505)
... +..|+.+.|.|.+.+.+ ++.+.+.|++++..+........ .........+.|.|..+..+|.|.|+|.|.|.
T Consensus 248 ~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~ 327 (444)
T 1igt_B 248 IKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNK 327 (444)
T ss_dssp HHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECT
T ss_pred hhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcC
Confidence 222 47799999999999885 44567889999988754211000 00000112347889999899999999999999
Q ss_pred CCcE
Q psy14886 264 VGKI 267 (505)
Q Consensus 264 ~g~~ 267 (505)
.|..
T Consensus 328 ~~~~ 331 (444)
T 1igt_B 328 DLPA 331 (444)
T ss_dssp TCSS
T ss_pred CCCC
Confidence 8875
No 77
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.93 E-value=1e-25 Score=224.62 Aligned_cols=428 Identities=10% Similarity=0.047 Sum_probs=249.7
Q ss_pred CCCCCceEEEEEEe-------ccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAF-------GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~-------~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
|.+|++++|.|.+. +.+.+.|.|++|++.+...... .+....+.|.|.++. ..|+| |+|.+... +
T Consensus 15 v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~~~~-----~~~~~~~~l~i~~~~-~~~~~-y~C~~~~~-~ 86 (589)
T 3l5h_A 15 VQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYT-----IINRTASSVTFTDIA-SLNIQ-LTCNILTF-G 86 (589)
T ss_dssp CCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGGGCB-----CCSSSCCBCCCCCCC-SSCCC-CCCC-CCT-T
T ss_pred EeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChHHcc-----ccCCcEeEEEEecCC-Cccee-eEEecccC-C
Confidence 57899999999997 5567899999999877643111 111124689999999 77765 77887531 2
Q ss_pred ce---EeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe-----------
Q psy14886 74 TR---YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF----------- 139 (505)
Q Consensus 74 ~~---~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~----------- 139 (505)
.. ...+.|.|.. +| +....|.|...+.....+.|....... ....+.+.
T Consensus 87 ~~~~~~~~~~l~v~~-pP---------------~~P~nl~c~~~~~~~~~~~W~~~~~~~-~~~~y~l~~~~~~~~~~~c 149 (589)
T 3l5h_A 87 QLEQNVYGITIISGL-PP---------------EKPKNLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKFADC 149 (589)
T ss_dssp CC-CCCCCCCCCC-C-CC---------------CCCEEEEEEEETTSCEEEEEECCSCCS-SCEEEEECCBCSSSBCCCE
T ss_pred CcccEEEeEEEeccC-CC---------------CCCEeeEEEECCCceEEEEECCCCcCC-cCceEEEEEEEcCCCcccC
Confidence 21 1122333321 22 334467777666556677776532110 00111111
Q ss_pred --e---CCCEEEc-CCCCCCCEEEEEEEEcCCCceeee-EEEEEEeCCeeeeeCCCceEEE----eeccEEEEEEeeec-
Q psy14886 140 --E---NGNLLIS-PVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIA----AHRNLQLRCSAHTE- 207 (505)
Q Consensus 140 --~---~~~l~i~-~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~----~g~~~~l~C~~~~~- 207 (505)
. .....+. .+.......|+|.|.|..|..... ..+.+.. .....++....+. ....+.|.|.....
T Consensus 150 ~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~--~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~ 227 (589)
T 3l5h_A 150 KAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVY--KVKPNPPHNLSVINSEELSSILKLTWTNPSIK 227 (589)
T ss_dssp ECBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGG--SEECCCCCSCEEECTTTCTTCEEEECCCCGGG
T ss_pred CCCCCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccEEEcccc--EEEcCCCceEEEEecCCCCCeEEEEeCCCCCC
Confidence 0 0122333 334445567889999998875332 2221111 0011123333342 23568888875432
Q ss_pred --CCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE-----EEEEEE-EcCCC
Q psy14886 208 --ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS-----TKTTVI-VEGPP 279 (505)
Q Consensus 208 --~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~-----~~~~l~-v~~~p 279 (505)
+...+.+.|...+.. .+..............+.+..+.....+.|+..|.|..|... ..+.+. ....|
T Consensus 228 ~~~~~~Y~v~~~~~~~~----~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P 303 (589)
T 3l5h_A 228 SVIILKYNIQYRTKDAS----TWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRP 303 (589)
T ss_dssp GTSCEEEEEEEEETTCS----CCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCC
T ss_pred CeeeEEEEEEECCCCCC----CcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCC
Confidence 112234445443311 111110011112345788899998889999999998876531 222111 12334
Q ss_pred -CCCCceEEE----EEeCCeEEEEeecC--CCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeecc
Q psy14886 280 -GLPGGVQVV----EVHKTSATIQWTDG--ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352 (505)
Q Consensus 280 -~~p~~~~~~----~~~~~~v~l~w~~~--~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 352 (505)
.+|..+... ..+..++.|.|+++ .+.++.+.+|.|.++.... .|.... .. ...+.. |.
T Consensus 304 ~~~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~-~~~~~~------------~~-~~~~~~-l~ 368 (589)
T 3l5h_A 304 SKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKS-HLQNYT------------VN-ATKLTV-NL 368 (589)
T ss_dssp CSCCCEEEECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTS-CCCBCC------------CS-SSCCEE-CC
T ss_pred CCCCcEEEEeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCC-Cceeec------------cC-CceEEE-Ee
Confidence 345444433 34568999999974 3567889999999876543 332211 11 122233 88
Q ss_pred CCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC
Q psy14886 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 432 (505)
Q Consensus 353 ~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~ 432 (505)
+++.|.|+|.|.|..|.|+++.. .+.+....++.||.++.+... .+++.|.|+++. . .+.+|.|+|+..+..
T Consensus 369 ~~~~Y~~~V~A~n~~G~~~~s~~--~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~--~---~i~~Y~v~~~~~~~~ 440 (589)
T 3l5h_A 369 TNDRYLATLTVRNLVGKSDAAVL--TIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPR--E---SVKKYILEWCVLSDK 440 (589)
T ss_dssp CSSCCCEEEEEEBTTBCCCCCCC--CCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCS--S---CCSCBCCEEEEECSS
T ss_pred CCCCEEEEEEEEeCCccCCCeEE--EeecccccCCCCcceEEEEEC-CCeEEEEEECCC--C---CccEEEEEEEECCCC
Confidence 99999999999999999988764 333333455667778877654 689999999842 2 799999999997743
Q ss_pred CcE-EEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEee
Q psy14886 433 EFQ-SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWH 484 (505)
Q Consensus 433 ~~~-~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t 484 (505)
... ...... .......+.+.+|.|++.|.|+|.|+|..|.|.++.+ .+.|
T Consensus 441 ~~~~~~~~~~-~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~~~-~~~t 491 (589)
T 3l5h_A 441 APCITDWQQE-DGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPESI-KAYL 491 (589)
T ss_dssp SCCCEEECCB-CSSCCEEECCSCCCSSSEEEEEECBEETTEECCCEEE-EEES
T ss_pred CCCccCcEEe-eCCcceEEehhccccCcEEEEEEEEEeCCcccCCEEE-EEEe
Confidence 210 011111 1223456778999999999999999999999998643 3334
No 78
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.92 E-value=3.1e-25 Score=213.82 Aligned_cols=259 Identities=17% Similarity=0.284 Sum_probs=161.9
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEEC--CEECc---C----C---CCCCCCCCcEEEEC------CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRN--GELLN---S----E---TLPLEDQDRYFIQD------NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~--~~~l~---~----~---~~~~~~~~~~~~~~------~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ ...+.|+|+ +..+. . . .......+|+.+.. .+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 90 (457)
T 1hzh_H 12 KKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLR-SAD 90 (457)
T ss_dssp ECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred EcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCC-ccc
Confidence 46899999999998865 678999994 22110 0 0 00011245776531 389999999 999
Q ss_pred CeEEEEEEEcccC------------ceEeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEE
Q psy14886 61 PAMYQCRAKNQLK------------TRYSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVW 123 (505)
Q Consensus 61 ~G~Y~C~~~~~~~------------~~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W 123 (505)
+|.|+|.+.+..+ .....+.|.|... +|.+...+ ....+.+|+.++|.|.+.+. |. +.+.|
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 168 (457)
T 1hzh_H 91 TAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVTVSW 168 (457)
T ss_dssp CEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEEC--CCSCCCTTCCEEEEEEEESBBSCCCEEEE
T ss_pred CEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecC--ccccccCCCcEEEEEEEeEEeCCCeEEEE
Confidence 9999999998764 1223456777642 23332221 11235789999999999887 64 79999
Q ss_pred EECCEEecCCCc-EEEeeC------CCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe-----------------C
Q psy14886 124 KKDGNIIGSGGR-RKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----------------G 179 (505)
Q Consensus 124 ~~~g~~~~~~~~-~~~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~-----------------~ 179 (505)
++++..+..... .....+ ..|.|.++..+| |.|+|.|.|..+.......+.+.. .
T Consensus 169 ~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 247 (457)
T 1hzh_H 169 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGG 247 (457)
T ss_dssp TTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSS
T ss_pred EeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCC
Confidence 999864321100 011112 258999999989 999999999876654444333221 2
Q ss_pred CeeeeeCCCceE-EEeeccEEEEEEeeecCCC--CeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEec---CCCCC-
Q psy14886 180 PSYYEQLPPKIT-IAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN---ASFAD- 252 (505)
Q Consensus 180 p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~~~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~---~~~~~- 252 (505)
|.+....+.... +..|+.+.|.|.+.+.+++ .+.+.|++++..+..... .......++.+.+.. +...+
T Consensus 248 p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~----~~~~~~~~g~~~~~~~l~i~~~d~ 323 (457)
T 1hzh_H 248 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT----KPREEQYNSTYRVVSVLTVLHQDW 323 (457)
T ss_dssp CEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEE----EEEEECTTSCEEEEEEECCCHHHH
T ss_pred ceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccccccc----ccceecCCCcEEEEEEEEECHHHc
Confidence 332122222222 4569999999999987543 357889999988753210 001112233343332 33444
Q ss_pred --CEEEEEEEEecCCcE
Q psy14886 253 --AGEYECVVKSTVGKI 267 (505)
Q Consensus 253 --~g~y~C~~~n~~g~~ 267 (505)
.|.|+|.|.|..+..
T Consensus 324 ~d~G~Y~C~a~n~~~~~ 340 (457)
T 1hzh_H 324 LNGKEYKCKVSNKALPA 340 (457)
T ss_dssp HHTCCEEEEEECTTSSS
T ss_pred cCCCcEEEEEeCCCCCC
Confidence 999999999876654
No 79
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.92 E-value=9.7e-26 Score=208.65 Aligned_cols=258 Identities=16% Similarity=0.254 Sum_probs=161.2
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEEC--CEECcC-------C---CCCCCCCCcEEEEC------CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRN--GELLNS-------E---TLPLEDQDRYFIQD------NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~--~~~l~~-------~---~~~~~~~~~~~~~~------~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+. +.+.|.|+|+ +..+.. . .......+|+.+.. .+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 90 (344)
T 1za6_B 12 VKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLR-SED 90 (344)
T ss_dssp ECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred EeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCC-ccc
Confidence 4689999999999876 3688999996 332210 0 00001245676532 489999999 999
Q ss_pred CeEEEEEEEcccCceEeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEec----
Q psy14886 61 PAMYQCRAKNQLKTRYSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIG---- 131 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~---- 131 (505)
+|.|+|.+.|..+.....+.|.|... +|.+...+ +...+.+|+.++|.|.+.|. |. +.+.|+++|..+.
T Consensus 91 ~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~ 168 (344)
T 1za6_B 91 TAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF 168 (344)
T ss_dssp CEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEEC--CSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEEC
T ss_pred CEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEcc--ccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeEC
Confidence 99999999985444444567777632 23322211 11225789999999999886 64 6999999987532
Q ss_pred -----CCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE------------------------EEeCCee
Q psy14886 132 -----SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI------------------------VLHGPSY 182 (505)
Q Consensus 132 -----~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~------------------------v~~~p~~ 182 (505)
.+.++.. ...|.|.++..+| |.|+|.|.|..+.......+. +..+|.+
T Consensus 169 ~~~~~~~~~~~~--~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v 245 (344)
T 1za6_B 169 PAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQV 245 (344)
T ss_dssp CCEECTTSCEEE--EEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCEE
T ss_pred CCeECCCCCEEE--EEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEE
Confidence 1111111 2258888888878 999999999877643332221 1123333
Q ss_pred eeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc---ccCCeeeecCCeEEEecCCCCCCEEEEEE
Q psy14886 183 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE---LETPNINIDGGLLEITNASFADAGEYECV 259 (505)
Q Consensus 183 ~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~~~g~y~C~ 259 (505)
....+... ...|..+.|.|.+.+.+++.+.+.|.++|..+....... ..... ....+.|.+.....++.|.|+|.
T Consensus 246 ~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~-~~~~s~l~i~~~~~~~~g~YtC~ 323 (344)
T 1za6_B 246 YTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGS-FFLYSKLTVDKSRWQQGNVFSCS 323 (344)
T ss_dssp EEECCCGG-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSC-EEEEEEEEECHHHHHTTCEEEEE
T ss_pred EEeCCChH-hccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCc-EEEEEEEEEChHHccCCCeEEEE
Confidence 33222222 224667999999999766667889999987765321000 00000 00112344555455679999999
Q ss_pred EEecCCc
Q psy14886 260 VKSTVGK 266 (505)
Q Consensus 260 ~~n~~g~ 266 (505)
|.|....
T Consensus 324 a~~~~l~ 330 (344)
T 1za6_B 324 VMHEALH 330 (344)
T ss_dssp EECTTST
T ss_pred EEcCCCC
Confidence 9997654
No 80
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.92 E-value=4e-24 Score=181.22 Aligned_cols=170 Identities=20% Similarity=0.358 Sum_probs=140.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE-CC---eEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-DN---VLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~-~~---~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+. ...++.+. .+ +|.|.+++ .+|+|.|+|.+.|..+...
T Consensus 19 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~-------~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~~~~~~ 90 (197)
T 3lcy_A 19 TKLGEAAQLSCQIVGRPLPDIKWYRFGKELI-------QSRKYKMSSDGRTHTLTVMTEE-QEDEGVYTCIATNEVGEVE 90 (197)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEEEC-------CCSSEEEEESSSEEEEEEECCS-GGGCEEEEEEEECSSCEEE
T ss_pred EeCCCcEEEEEEEecCCCCEEEEEECCEECC-------CCccEEEEeCCCEEEEEEecCC-ccCCEEEEEEEECCCCcee
Confidence 3589999999999998999999999999886 33445442 22 89999999 9999999999999888888
Q ss_pred eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeC---CCEEEcCCCC-C
Q psy14886 77 SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISPVSR-D 152 (505)
Q Consensus 77 ~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~---~~l~i~~v~~-~ 152 (505)
..+.+.|...+......+......+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..+... ..|.|.++.. +
T Consensus 91 ~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~ 170 (197)
T 3lcy_A 91 TSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKT 170 (197)
T ss_dssp EEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHH
T ss_pred EEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchh
Confidence 88888887643333332334566788999999999999999999999999999987776666554 4699999985 8
Q ss_pred CCEEEEEEEEcCCCceeeeEEEEEEe
Q psy14886 153 DSGIYSCTATNVHGMDESKGRLIVLH 178 (505)
Q Consensus 153 d~G~y~C~~~~~~g~~~~~~~l~v~~ 178 (505)
|+|.|+|.|.|..|.....+.|.|.+
T Consensus 171 d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 171 HAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp HCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred hCceEEEEEEcCcCceEEEEEEEEec
Confidence 99999999999999998888888754
No 81
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.92 E-value=1e-25 Score=206.68 Aligned_cols=258 Identities=16% Similarity=0.206 Sum_probs=160.9
Q ss_pred CceEEEEEEecc-C-CCeEEEEECCEECcCCCC---CCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 5 ADLTWTCEAFGV-P-DVTYSWFRNGELLNSETL---PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 5 ~~~~l~C~~~~~-p-~~~~~W~~~~~~l~~~~~---~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
+.++|.|.+.+. | .+.|+|+|||..+..... .....+.+. ..+.|.|..+. .+|+|.|+|.|.|..+.....+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~-~~s~l~i~~~~-~~d~g~Y~C~a~n~~~~~~~~~ 102 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELAS-TQSELTLSQKH-WLSDRTYTCQVTYQGHTFEDST 102 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEE-EEEEEEEEHHH-HHTTCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEE-EEEEEEEcHHH-cCCCCcEEEEEEeCCCCcceee
Confidence 699999999885 4 579999999998863210 000012221 22468888888 8899999999998765443322
Q ss_pred EEEEE--ecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC---eEEEEECC-EEecCCCcEEE-------eeCCCEE
Q psy14886 80 QLRVL--TLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP---KFVWKKDG-NIIGSGGRRKI-------FENGNLL 145 (505)
Q Consensus 80 ~l~v~--~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~---~i~W~~~g-~~~~~~~~~~~-------~~~~~l~ 145 (505)
.+.+. ...|.+...+ +....+.+|+++.|.|.+.+. |.+ .|.|++++ ..+........ ...+.|.
T Consensus 103 ~~~~~~~~~~p~v~~~~-p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~ 181 (323)
T 2wqr_A 103 KKCADSNPRGVSAYLSR-PSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLP 181 (323)
T ss_dssp CCCCCSSGGGCEEEECC-CCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEE
T ss_pred ecCCCCCCCCCEEEEcC-CCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEE
Confidence 21000 0112221211 122346789999999998875 555 99999964 44432211111 1223599
Q ss_pred EcCCCCCCCEEEEEEEEcCCCceeeeEEEEE----EeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCE
Q psy14886 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIV----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221 (505)
Q Consensus 146 i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~ 221 (505)
|.++..+|+|.|+|.|.|..+.......+.+ ..+|.+....+.... ..|+.+.|.|.+.+.+++.+.+.|+++|.
T Consensus 182 I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~-~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 260 (323)
T 2wqr_A 182 VGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWP-GSRDKRTLACLIQNFMPEDISVQWLHNEV 260 (323)
T ss_dssp CCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCT-TCTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHH-hcCCcEEEEEEeeeeeCCCcEEEEEECCE
Confidence 9999999999999999987643322222221 123433322222111 22899999999998665566889999999
Q ss_pred EecCCCCCcc----cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 222 RIGNMDLNEL----ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 222 ~~~~~~~~~~----~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.+........ .........+.|.|..+..+|.|.|+|.|.|..+.
T Consensus 261 ~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 261 QLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp ECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred ECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 8754321100 00001112246888888888999999999998876
No 82
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.92 E-value=7.1e-24 Score=181.81 Aligned_cols=171 Identities=26% Similarity=0.457 Sum_probs=138.0
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE---C--CeEEEEcCCCC-CCCeEEEEEEEcccCc
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---D--NVLTIRYLNPE-RDPAMYQCRAKNQLKT 74 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~---~--~~L~i~~~~~~-~d~G~Y~C~~~~~~~~ 74 (505)
|.+|++++|.|.+.+.|.+.+.|+|++..+.. ...++... + .+|.|.+++ . +|+|.|+|.+.|..+.
T Consensus 18 v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~------~~~~~~~~~~~~~~~~L~i~~v~-~~~d~G~Y~C~~~n~~g~ 90 (212)
T 2yd1_A 18 VRVGGVASFYCAARGDPPPSIVWRKNGKKVSG------TQSRYTVLEQPGGISILRIEPVR-AGRDDAPYECVAENGVGD 90 (212)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEETTEECCT------TSTTEEEEEETTTEEEEEESSCC-TTTTCSEEEEEEECSSSC
T ss_pred EecCCEEEEEEEEccCCCCeEEEEECCEECCC------CcceeEEEEcCCCeEEEEEEecC-CCCcCceEEEEEEeCCCC
Confidence 45899999999999999999999999998862 23455442 2 489999999 9 9999999999998888
Q ss_pred -eEeeEEEEEEecC------CCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEc
Q psy14886 75 -RYSSAQLRVLTLK------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147 (505)
Q Consensus 75 -~~~~~~l~v~~~~------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~ 147 (505)
....+.|.|...+ |.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+..........++.|.|.
T Consensus 91 ~~~~~~~l~V~~~~~~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~ 168 (212)
T 2yd1_A 91 AVSADATLTIYEGDKTPAGFPVITQGP--GTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIE 168 (212)
T ss_dssp EEEEEEEEEEECTTCSCTTCCEEEECC--CCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTEEEEC
T ss_pred eEEeeEEEEEecccCCCCCCCeeEeCC--CceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCeEEEc
Confidence 6667888887532 3343333 346688999999999999999999999999999876433334457789999
Q ss_pred CCCCCCCEEEEEEEEcCCCceeee-EEEEEEeCC
Q psy14886 148 PVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGP 180 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~~p 180 (505)
++..+|+|.|+|.|.|..|..... +.|.|...+
T Consensus 169 ~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 169 NSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 999999999999999999988765 788886543
No 83
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.92 E-value=2.4e-24 Score=181.76 Aligned_cols=170 Identities=29% Similarity=0.433 Sum_probs=140.0
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEEcccCc-eEe
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKT-RYS 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~-~~~ 77 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+.. ...++.+ .+.+|.|.+++ .+|+|.|+|.+.+..+. ...
T Consensus 19 ~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~------~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~~~~~~~~~~ 91 (192)
T 2iep_A 19 ALVEEVATFMCAVESYPQPEISWTRNKILIKL------FDTRYSIRENGQLLTILSVE-DSDDGIYCCTANNGVGGAVES 91 (192)
T ss_dssp EETTSCEEEECCEEEESCCEEEEEETTEECCT------TCTTEEEEGGGTEEEESSCC-GGGCEEEEEEEECSSSCCEEE
T ss_pred eeCCCcEEEEeeCCCCCCCeEEEEECCEEccc------cCccEEEcCCccEEEEcCCC-cccCeEEEEEEEcCCCceeEe
Confidence 35899999999999989899999999998863 2345555 34579999999 99999999999998777 444
Q ss_pred eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEE
Q psy14886 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 78 ~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y 157 (505)
.+.+.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+.....++.|.|.++..+|+|.|
T Consensus 92 ~~~l~v~~-~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 168 (192)
T 2iep_A 92 CGALQVKM-KPKITRPP--INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQY 168 (192)
T ss_dssp EEEEEEEE-EEEEEECC--CCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEE
T ss_pred EEEEEEEe-CCccccCC--cceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEE
Confidence 56777775 56555543 3467889999999999999999999999999999887777777788999999999999999
Q ss_pred EEEEEcCCCceee-eEEEEEEeCC
Q psy14886 158 SCTATNVHGMDES-KGRLIVLHGP 180 (505)
Q Consensus 158 ~C~~~~~~g~~~~-~~~l~v~~~p 180 (505)
+|.|.|..|.... .+.|.|..+|
T Consensus 169 ~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 169 RCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEEcCCCcEEEEEEEEEEEeCC
Confidence 9999999988744 4777776543
No 84
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.92 E-value=8.2e-24 Score=179.28 Aligned_cols=191 Identities=22% Similarity=0.333 Sum_probs=152.0
Q ss_pred cCCCCCCCceEEEEEeCCeEEEEeecCC-CCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCC
Q psy14886 276 EGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 354 (505)
Q Consensus 276 ~~~p~~p~~~~~~~~~~~~v~l~w~~~~-~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 354 (505)
..+|.+|.++.+.....+++.|+|+++. .++.++.+|.|+++..+...|....... ....+.+.+ |.++
T Consensus 3 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---------~~~~~~~~~-L~p~ 72 (197)
T 3lpw_A 3 MDTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNC---------HKTSWKVDQ-LQEG 72 (197)
T ss_dssp CCSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEE---------CSSEEEECC-CCTT
T ss_pred CCCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCC---------CccEEEEcC-CCCC
Confidence 4578999999999999999999999986 4455699999999998878887764322 233445555 9999
Q ss_pred ceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCc
Q psy14886 355 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 434 (505)
Q Consensus 355 ~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~ 434 (505)
+.|.|+|+|.|..|.+.++... .+.+.. .++.+|.++.+.....+++.|.|++ |..+.++.+.+|.|+|+..+...|
T Consensus 73 t~Y~~~V~a~~~~g~~~~s~~~-~~~t~~-~~p~~p~~~~~~~~~~~~v~l~W~~-p~~~~~~~i~~Y~v~~~~~~~~~~ 149 (197)
T 3lpw_A 73 CSYYFRVLAENEYGIGLPAETA-ESVKAS-ERPLPPGKITLMDVTRNSVSLSWEK-PEHDGGSRILGYIVEMQTKGSDKW 149 (197)
T ss_dssp CEEEEEEEEEETTEECCCEECS-SCEESC-CCCCCCSCEEEEEECSSCEEEEECC-CSCCTTSCCCEEEEEEEETTCSCC
T ss_pred CEEEEEEEEEcCccccCCCCCc-cceecC-CCCCCCcccEEEeccCCeEEEEecC-CCcCCCCcccEEEEEEEeCCCCce
Confidence 9999999999999999877654 333433 3456888999888889999999998 344445699999999999887777
Q ss_pred EEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEee
Q psy14886 435 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWH 484 (505)
Q Consensus 435 ~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t 484 (505)
...... ..+.+.+.+|.|++.|.|+|+|+|..|.|++|+.....+
T Consensus 150 ~~~~~~-----~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~~v~ 194 (197)
T 3lpw_A 150 ATCATV-----KVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSVPVI 194 (197)
T ss_dssp EEEEEE-----SSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEE
T ss_pred EEeecc-----cccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcccEe
Confidence 754432 245688999999999999999999999999997765544
No 85
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.92 E-value=9.8e-24 Score=190.43 Aligned_cols=217 Identities=18% Similarity=0.174 Sum_probs=161.6
Q ss_pred ecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC---CCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCC
Q psy14886 246 TNASFADAGEYECVVKSTVGKISTKTTVIVEG---PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 322 (505)
Q Consensus 246 ~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~---~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~ 322 (505)
..+.....+.|++.|.|..|............ +|.++.++.+.... +++.|+|+++.. ++.+|.|+|+.....
T Consensus 66 ~~l~p~t~Y~~~V~A~n~~G~s~~s~~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~---~i~~Y~v~~~~~~~~ 141 (290)
T 3l5i_A 66 TVNLTNDRYLATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE---SVKKYILEWCVLSDK 141 (290)
T ss_dssp EEEECSSCEEEEEEEEESSCBCCCEEEEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS---CCCEEEEEEEEECSS
T ss_pred EEEcCCceEEEEEEEEcCCCCCCCceEEeecccccCCCccceeEEEeCC-CeEEEEEeCCCC---CCCcEEEEEEECCCC
Confidence 34445677888999999988754442222222 45555666665554 799999998754 789999999876543
Q ss_pred -----CeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeec
Q psy14886 323 -----TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397 (505)
Q Consensus 323 -----~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~ 397 (505)
.|..... .....++..+|.+++.|.|+|.|.|..|.|.+... ...+.+..|..+| .+.+..
T Consensus 142 ~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~--~~~t~~~~P~~~p-~~~~~~ 207 (290)
T 3l5i_A 142 APCITDWQQEDG-----------TVHRTYLRGNLAESKCYLITVTPVYADGPGSPESI--KAYLKQAPPSKGP-TVRTKK 207 (290)
T ss_dssp SCCCCEEEEEET-----------TCSEEECCSCCCTTCEEEEEEEEEETTEECCCEEE--EEESSCCCCSSCC-CEEEEE
T ss_pred CCCCcCeEEccC-----------CCcceEEecCcCCccEEEEEEEEEeCCcccccEEE--EeEccccCCCCCC-eeeEee
Confidence 3554422 22233343459999999999999999999874222 4557777787777 566777
Q ss_pred cccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCC
Q psy14886 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477 (505)
Q Consensus 398 ~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s 477 (505)
.+.++|.|.|+++++.+.+|.|.+|+|+|+..++. |....+.. ..+.+.|.+|.|++.|.|+|.|+|.+| |++|
T Consensus 208 ~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~-~~~~~~~~----~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s 281 (290)
T 3l5i_A 208 VGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ETAVNVDS----SHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDG 281 (290)
T ss_dssp ECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC-CEEEEEET----TCSEEEECSCCTTCEEEEEEEEEETTE-EEEC
T ss_pred ccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC-eEEEEeCC----CceEEEeCCCCCCCEEEEEEEEEeCCC-CCCC
Confidence 78899999999877888999999999999997643 44333322 346789999999999999999999999 9999
Q ss_pred ceEEEeecc
Q psy14886 478 EVVTIWHDP 486 (505)
Q Consensus 478 ~~~~~~t~p 486 (505)
..+.+.|.+
T Consensus 282 ~~~~~~T~~ 290 (290)
T 3l5i_A 282 PEFTFTTPK 290 (290)
T ss_dssp CCEEEECCC
T ss_pred CceEeecCC
Confidence 999998864
No 86
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.92 E-value=4.2e-24 Score=180.64 Aligned_cols=170 Identities=29% Similarity=0.411 Sum_probs=138.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEEC--CeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--NVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~--~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+..... ...++...+ .+|.|.+++ .+|+|.|+|.+.+..+.....
T Consensus 17 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~---~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~~~~~~~~ 92 (194)
T 2a38_A 17 VLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTL---PGVQISFSDGRAKLTIPAVT-KANSGRYSLKATNGSGQATST 92 (194)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTS---TTCEEEEETTEEEEEESSCC-GGGCEEEEEEEEETTEEEEEE
T ss_pred EECCCEEEEEEEEEecCCCEEEEEECCEEcccccC---CceEEEeCCCEEEEEECCCC-cccCEEEEEEEEcCCceEeEE
Confidence 35899999999999989899999999988874321 112333333 489999999 999999999999988877777
Q ss_pred EEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCC---CEEEcCCCCCC
Q psy14886 79 AQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDD 153 (505)
Q Consensus 79 ~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~---~l~i~~v~~~d 153 (505)
+.+.|.. .+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|+++|..+....+.....++ .|.|.++..+|
T Consensus 93 ~~l~v~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 170 (194)
T 2a38_A 93 AELLVKAETAPPNFVQRL--QSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPED 170 (194)
T ss_dssp EEEEEECCCEEEEEEECC--CCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGG
T ss_pred EEEEEccCCCCCEEEeCC--ccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhc
Confidence 7788774 244444443 3467899999999999999999999999999999877776665554 59999999999
Q ss_pred CEEEEEEEEcCCCceeeeEEEEE
Q psy14886 154 SGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 154 ~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
.|.|+|.|.|..|.....+.|.|
T Consensus 171 ~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 171 SGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEE
T ss_pred CeEEEEEEEeCCCceEEEEEEEE
Confidence 99999999999998888887776
No 87
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=1.2e-25 Score=215.84 Aligned_cols=260 Identities=15% Similarity=0.180 Sum_probs=162.5
Q ss_pred CCCCceEEEEEEecc-CCC-eEEEEECCEECcCCCCCC-CCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 2 DNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSETLPL-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~-p~~-~~~W~~~~~~l~~~~~~~-~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
.+|+.++|.|.+.|. |.+ .|.|+|++..+....... ...+.+.. .+.|.|.+++ .+| |.|+|.|.|..+.....
T Consensus 136 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~s~L~i~~~~-~~d-g~Y~C~a~n~~~~~~~~ 212 (444)
T 1igt_B 136 TTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTL-SSSVTVTSST-WPS-QSITCNVAHPASSTKVD 212 (444)
T ss_dssp CCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEE-EEEEEECSTT-TTT-SCCEEEEEETTTTEEEE
T ss_pred CCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEE-EEEEEEchhh-cCC-CeEEEEEEeCCCCcceE
Confidence 589999999999884 765 999999987642110000 01123332 3679999999 889 99999999988875444
Q ss_pred EEEEEE---------------e--cCCCccCCCCCceEEeeCCCeEEEEeecCCCC----CCeEEEEECCEEecCCCc--
Q psy14886 79 AQLRVL---------------T--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAP----KPKFVWKKDGNIIGSGGR-- 135 (505)
Q Consensus 79 ~~l~v~---------------~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p----~~~i~W~~~g~~~~~~~~-- 135 (505)
..+.+. . .+|.+...+......+.+|++++|.|.+.|.+ .+.+.|+++|..+.....
T Consensus 213 ~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~ 292 (444)
T 1igt_B 213 KKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQT 292 (444)
T ss_dssp EECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBC
T ss_pred EEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCccccc
Confidence 333221 0 12322121211111147899999999998873 369999999988754321
Q ss_pred EEEe------eCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEE----EEEeCCeeeeeCCCceEEEeeccEEEEEEee
Q psy14886 136 RKIF------ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 205 (505)
Q Consensus 136 ~~~~------~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 205 (505)
.... ..+.|.|.++..+|+|.|+|.|.|..+.......+ .+..+|.+....+....+..|+ +.|.|.+.
T Consensus 293 ~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~L~C~~~ 371 (444)
T 1igt_B 293 HREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQ-VTLTCMVT 371 (444)
T ss_dssp CEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSE-EEEEEEEE
T ss_pred ceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCe-EEEEEEEE
Confidence 1111 12369999999999999999999988866333333 2223454433333222233444 99999999
Q ss_pred ecCCCCeEEEEEeCCEEecCCCCCcc--cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCC
Q psy14886 206 TEELLDVAYIWTHNGVRIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265 (505)
Q Consensus 206 ~~~~~~~~~~w~~~~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g 265 (505)
+.+++.+.+.|+++|..+........ .........+.|.+.....+|.|.|+|.|.|...
T Consensus 372 g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 372 DFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp EEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred eeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 96555568889999988743110000 0000001112455555555679999999998654
No 88
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=7.7e-27 Score=223.41 Aligned_cols=261 Identities=15% Similarity=0.226 Sum_probs=168.3
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc---CC-------CCCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN---SE-------TLPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~---~~-------~~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
|.+|++++|.|.+.+.+ .+.|.|+|++ ..+. .. .......+|+.+. ..+|.|.+++ .+|
T Consensus 11 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 89 (434)
T 1igy_B 11 ARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLT-SDD 89 (434)
T ss_dssp ECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBC-GGG
T ss_pred ecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCC-hHH
Confidence 46899999999998754 6789999963 2210 00 0001123577653 2489999999 999
Q ss_pred CeEEEEEEEcccCceEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecC---
Q psy14886 61 PAMYQCRAKNQLKTRYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGS--- 132 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~--- 132 (505)
+|.|+|.+.+..+.....+.|.|.. .+|.+.... ....+.+|+.++|.|.+.|. |.+ .+.|++++..+..
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~ 167 (434)
T 1igy_B 90 SAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTF 167 (434)
T ss_dssp CSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEEC--CCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEEC
T ss_pred CEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcC--CccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEec
Confidence 9999999988544333456777763 133332211 11225789999999999886 666 9999998875310
Q ss_pred -----CCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe---------C---CeeeeeCCCceE-EEe
Q psy14886 133 -----GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH---------G---PSYYEQLPPKIT-IAA 194 (505)
Q Consensus 133 -----~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~---------~---p~~~~~~~~~~~-~~~ 194 (505)
...+. ..+.|.|.++..+| |.|+|.|.|..+.......+.+.. . |.+....+.... +..
T Consensus 168 ~~~~~~~~~~--~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~ 244 (434)
T 1igy_B 168 PAVLQSDLYT--LSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLI 244 (434)
T ss_dssp CCEECSSCEE--EEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHST
T ss_pred CceecCCcEE--EEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhccc
Confidence 11111 12358898998888 999999999988754444332210 0 333222222222 678
Q ss_pred eccEEEEEEeeecCC--CCeEEEEEeCCEEecCCCCCcc--cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 195 HRNLQLRCSAHTEEL--LDVAYIWTHNGVRIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 195 g~~~~l~C~~~~~~~--~~~~~~w~~~~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
|+.+.|.|.+.+.++ +.+.+.|++++..+........ .........+.|.|..+..+|.|.|+|.|.|..|..
T Consensus 245 G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 245 TVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp TSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred CCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 999999999998742 3456789999876643211000 000111123578888888899999999999988864
No 89
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.91 E-value=3.1e-23 Score=174.53 Aligned_cols=163 Identities=23% Similarity=0.388 Sum_probs=134.3
Q ss_pred CC-CCceEEEEEEeccCC--CeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 2 DN-QADLTWTCEAFGVPD--VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 2 ~~-G~~~~l~C~~~~~p~--~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
.+ |++++|.|.+.+.|. +.+.|+|++..+.... ....++.|.|.+++ .+|+|.|+|.+.|. +.....
T Consensus 15 ~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~--------~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~-~~~~~~ 84 (190)
T 2wv3_A 15 RDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATR--------KNASNMEYRINKPR-AEDSGEYHCVYHFV-SAPKAN 84 (190)
T ss_dssp CCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCC--------BCCSEEEEEESSCC-GGGCEEEEEEEEET-TEEEEE
T ss_pred ccCCceEEEEEEeccCCCCceEEEEEECCEECcccc--------eEeccEEEEEecCC-cccCEEEEEEEEeC-Cccccc
Confidence 45 999999999998776 8999999999987421 11145789999999 99999999999998 777778
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEE--CCEEec---CCCcEEEeeCC---CEEEcCCC
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIG---SGGRRKIFENG---NLLISPVS 150 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~--~g~~~~---~~~~~~~~~~~---~l~i~~v~ 150 (505)
+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+. ...++.+..++ .|.|.++.
T Consensus 85 ~~l~V~~-~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 161 (190)
T 2wv3_A 85 ATIEVKA-APDITGHK--RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQ 161 (190)
T ss_dssp EEEEEEC-CCEEEEEC--SEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCC
T ss_pred EEEEEec-CCcccccC--CcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEecc
Confidence 8888885 67665544 44668999999999999999999999999 787764 34555555443 59999999
Q ss_pred -CCCCEEEEEEEEcCCCceeeeEEEEEE
Q psy14886 151 -RDDSGIYSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 151 -~~d~G~y~C~~~~~~g~~~~~~~l~v~ 177 (505)
.+|.|.|+|.|.|..|.....+.|.|.
T Consensus 162 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 162 ITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp TTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 799999999999999998888888774
No 90
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.91 E-value=1.7e-23 Score=179.40 Aligned_cols=170 Identities=28% Similarity=0.454 Sum_probs=131.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE-----ECCeEEEEcC-CCCCCCeEEEEEEEcccCc
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-----QDNVLTIRYL-NPERDPAMYQCRAKNQLKT 74 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~-----~~~~L~i~~~-~~~~d~G~Y~C~~~~~~~~ 74 (505)
+.+|++++|.|.+.|.|.+.|.|+|++..+... ..... .+..|.|.++ + .+|+|.|+|.+.|..+.
T Consensus 18 v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~-------~~~~~~~~~~~~~~L~i~~v~~-~~d~G~Y~C~a~n~~g~ 89 (212)
T 2yd6_A 18 GVSGGVASFICQATGDPRPKIVWNKKGKKVSNQ-------RFEVIEFDDGSGSVLRIQPLRT-PRDEAIYECVASNNVGE 89 (212)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCCT-------TEEEEEEGGGTEEEEEECSCCT-TTTCEEEEEEEEETTEE
T ss_pred EecCCeEEEEEEEeeCCCCEEEEEECCcCCCCC-------ceeEEEEcCCCceEEEEeccCC-CCCCeEEEEEEEcCCCc
Confidence 358999999999999999999999999988732 11111 1346999999 7 89999999999998888
Q ss_pred eEeeEEEEEEecC------CCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC---CcEEEeeC---C
Q psy14886 75 RYSSAQLRVLTLK------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFEN---G 142 (505)
Q Consensus 75 ~~~~~~l~v~~~~------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~---~~~~~~~~---~ 142 (505)
....+.|.|...+ |.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+... .++..... +
T Consensus 90 ~~~~~~l~V~~~~~~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~ 167 (212)
T 2yd6_A 90 ISVSTRLTVLREDQIPRGFPTIDMGP--QLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIG 167 (212)
T ss_dssp EEEEEEEEEECGGGCCTTCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEE
T ss_pred EEEEEEEEEeccCccCCCcceeecCC--cceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeE
Confidence 7778888887521 3333333 3456889999999999999999999999999988653 33433332 5
Q ss_pred CEEEcCCCCCCCEEEEEEEEcCCCceeee-EEEEEEeCC
Q psy14886 143 NLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGP 180 (505)
Q Consensus 143 ~l~i~~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~~p 180 (505)
.|.|.++..+|+|.|+|.|.|..|...+. +.|.|...+
T Consensus 168 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 168 ALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 69999999999999999999999988666 677775544
No 91
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.91 E-value=3.3e-23 Score=200.51 Aligned_cols=260 Identities=15% Similarity=0.199 Sum_probs=164.0
Q ss_pred CCCCceEEEEEEecc-CC-C-eEEEEECCEECcCCCCC-C--CCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 2 DNQADLTWTCEAFGV-PD-V-TYSWFRNGELLNSETLP-L--EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~-p~-~-~~~W~~~~~~l~~~~~~-~--~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
.+|+.++|.|.+.|. |. + .|.|++++......... . ...+.+.. .+.|.|..+. .+|+|.|+|.|.|..+..
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~-~s~L~i~~~~-~~d~g~Y~C~a~n~~~~~ 216 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTT-SSQLTLPATQ-CLAGKSVTCHVKHYTNPS 216 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEE-EEEEEechhH-cCCCceEEEEEEECCCCc
Confidence 479999999999986 65 4 99999988543211100 0 01223332 2468999998 899999999999887632
Q ss_pred -EeeEEEEEEe-----------------cCCCccCCCCCceEEeeCCCeEEEEeecCCCCC---CeEEEEECCEEecCCC
Q psy14886 76 -YSSAQLRVLT-----------------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK---PKFVWKKDGNIIGSGG 134 (505)
Q Consensus 76 -~~~~~l~v~~-----------------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~---~~i~W~~~g~~~~~~~ 134 (505)
...+.+.|.. .+|.+...+ +....+.+|+++.|.|.+.|.++ +.|.| + +..+....
T Consensus 217 ~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~-p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~ 293 (475)
T 1iga_A 217 QDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHR-PALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAV 293 (475)
T ss_pred eeeeEecccccCcccccccccccCCCCCCCcEEEEcC-CChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCcc
Confidence 1122322210 122221211 11122579999999999988744 59999 4 43332111
Q ss_pred --cEEE------eeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEE---EeCCeeeeeCCCceEEEeeccEEEEEE
Q psy14886 135 --RRKI------FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCS 203 (505)
Q Consensus 135 --~~~~------~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v---~~~p~~~~~~~~~~~~~~g~~~~l~C~ 203 (505)
.... ...+.|.|.++..+|+|.|+|.|.|..+.......+.+ ..+|.+....+....+..|+.+.|.|.
T Consensus 294 ~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~ 373 (475)
T 1iga_A 294 QGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCL 373 (475)
T ss_pred ccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEE
Confidence 0111 12335999999999999999999999887654444432 344544443333334567889999999
Q ss_pred eeecCCCCeEEEEEeCCEEecCCCCCcc----c---CCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 204 AHTEELLDVAYIWTHNGVRIGNMDLNEL----E---TPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 204 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~----~---~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
+.+.+++.+.+.|+++|..+........ . ........+.|.|.....++.|.|+|.|.|....
T Consensus 374 ~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 374 ARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred EeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 9997665678899999988765421000 0 0001112235667777778899999999997654
No 92
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.91 E-value=1.7e-23 Score=177.26 Aligned_cols=169 Identities=27% Similarity=0.418 Sum_probs=137.1
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE---CC--eEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ---DN--VLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~---~~--~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+.. ...++... ++ +|.|.+++ .+|+|.|+|.+.|..+..
T Consensus 16 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~------~~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~~g~~ 88 (197)
T 2j8h_A 16 VRYQSNATLVCKVTGHPKPIVKWYRQGKEIIA------DGLKYRIQEFKGGYHQLIIASVT-DDDATVYQVRATNQGGSV 88 (197)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEETTEECCC------CSSSEEEEEETTTEEEEEECSCC-GGGCSEEEEEEEETTEEE
T ss_pred EcCCCEEEEEEEEeecCCCEEEEEECCEECcc------CCCcEEEEEcCCCEEEEEECcCC-HHhCEEEEEEEEECCCce
Confidence 36899999999999999999999999998873 23344432 22 89999999 999999999999988887
Q ss_pred EeeEEEEEEecCCCccCCC---CCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeC---CCEEEcC-
Q psy14886 76 YSSAQLRVLTLKPSFKKRP---LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISP- 148 (505)
Q Consensus 76 ~~~~~l~v~~~~p~~~~~~---~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~---~~l~i~~- 148 (505)
...+.|.|.. +|.+.... ......+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+... ..|.|.+
T Consensus 89 ~~~~~l~V~~-~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 167 (197)
T 2j8h_A 89 SGTASLEVEV-PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNG 167 (197)
T ss_dssp EEEEEEEEEE-EEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTC
T ss_pred eEEEEEEEcC-CCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCC
Confidence 7788888875 33332211 12446788999999999999999999999999999877666655432 4699999
Q ss_pred CCCCCCEEEEEEEEcCCCceeeeEEEEEE
Q psy14886 149 VSRDDSGIYSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 149 v~~~d~G~y~C~~~~~~g~~~~~~~l~v~ 177 (505)
+..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 168 ~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 168 VERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 99999999999999999998888888875
No 93
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.91 E-value=3.2e-23 Score=177.92 Aligned_cols=180 Identities=29% Similarity=0.555 Sum_probs=136.1
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeE-----EEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVL-----TIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L-----~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+....... ...+....++.+ .|.+++ .+|+|.|+|.+.|..+..
T Consensus 21 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~~~n~~g~~ 98 (212)
T 2v9r_A 21 VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDP-RSHRMLLPSGSLFFLRIVHGRKS-RPDEGVYVCVARNYLGEA 98 (212)
T ss_dssp ECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCT-TCSEEECTTSCEEESSCCCCSSC-CCSCEEEEEEEEETTEEE
T ss_pred EeCCCcEEEEEEcCCCCCCEEEEEECCEEeecccccc-ccceEEecCCcEEEEEEEecCCC-cccCeEEEEEEECCCCce
Confidence 4689999999999998999999999999886432110 112233334444 345568 999999999999887765
Q ss_pred -EeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCC
Q psy14886 76 -YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 153 (505)
Q Consensus 76 -~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d 153 (505)
...+.|.|...++.+...+ ....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+..........++.|.|.++..+|
T Consensus 99 ~~~~~~l~V~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d 176 (212)
T 2v9r_A 99 VSHDASLEVAILRDDFRQNP--SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSD 176 (212)
T ss_dssp ECCCEEEEECEECSSCSBCC--CCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEEEESSCCGGG
T ss_pred eecceEEEEEeccccceeCC--CceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeEEEeeCCHhh
Confidence 3467788876566555544 44678999999999998 8889999999999999876554445567889999999999
Q ss_pred CEEEEEEEEcCCCceeee-EEEEEEeCCeeee
Q psy14886 154 SGIYSCTATNVHGMDESK-GRLIVLHGPSYYE 184 (505)
Q Consensus 154 ~G~y~C~~~~~~g~~~~~-~~l~v~~~p~~~~ 184 (505)
+|.|+|.|.|..|..... +.|.|..+|.+..
T Consensus 177 ~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~ 208 (212)
T 2v9r_A 177 AGKYVCVGTNMVGERESEVAELTVLERPSFVK 208 (212)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred CeeEEEEEecccCceecceEEEEEEeCchHhh
Confidence 999999999999987665 8899987776543
No 94
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.91 E-value=3.1e-23 Score=178.59 Aligned_cols=172 Identities=31% Similarity=0.594 Sum_probs=136.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeE----EEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVL----TIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L----~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
+.+|++++|.|.+.+.|.+.|.|+|++..+..... ...++...++.+ .|.+++ .+|+|.|+|.+.|..+...
T Consensus 21 v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~---~~~~~~~~~~~~~~~l~i~~v~-~~d~G~Y~C~~~n~~g~~~ 96 (217)
T 2vr9_A 21 VKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEK---KSHRVQFKDGALFFYRTMQGKK-EQDGGEYWCVAKNRVGQAV 96 (217)
T ss_dssp ECTTSCEEECCEEECSSCCEEEEEETTEECCCSSS---SSSEEECTTSCEEESSCCBSSS-CBCCEEEEEEEEETTEEEE
T ss_pred EeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCc---cceeEEecCCceEEEEEeccCC-cccCceEEEEEecCCCccc
Confidence 46899999999999989999999999998874311 123444444444 578899 9999999999999877654
Q ss_pred e-eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEec--------CCCcEEEeeCCCEEE
Q psy14886 77 S-SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIG--------SGGRRKIFENGNLLI 146 (505)
Q Consensus 77 ~-~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~--------~~~~~~~~~~~~l~i 146 (505)
. .+.+.|...+|.+...+ ....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+. ...+.....++.|.|
T Consensus 97 ~~~~~l~v~~~~~~~~~~~--~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i 174 (217)
T 2vr9_A 97 SRHASLQIAVLRDDFRVEP--KDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLI 174 (217)
T ss_dssp CCCEEEEECEECCSCSBCC--CCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEE
T ss_pred cccceEEEEEeCCCcEECC--CccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEE
Confidence 3 57777776667666554 44678999999999998 888999999999999887 334555556678999
Q ss_pred cCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe
Q psy14886 147 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178 (505)
Q Consensus 147 ~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~ 178 (505)
.++..+|.|.|+|.|.|..|.......+.+..
T Consensus 175 ~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 175 SNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp SSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred eeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 99999999999999999999888876555543
No 95
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.91 E-value=4e-24 Score=203.66 Aligned_cols=225 Identities=20% Similarity=0.241 Sum_probs=154.2
Q ss_pred CCCCEEEEEEEEecCCcEEEE-EEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCC-CCceEEEEEEeCC--CCCeE
Q psy14886 250 FADAGEYECVVKSTVGKISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR-PITHYKIIARTNW--NSTWF 325 (505)
Q Consensus 250 ~~~~g~y~C~~~n~~g~~~~~-~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~-~i~~y~v~~~~~~--~~~w~ 325 (505)
..+.|.|.|.+.|..+..... .......+|.+|.++. ..+..+++.|+|.+|.+.++ ++..|.|+++... ...|.
T Consensus 304 s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~ 382 (536)
T 3fl7_A 304 PSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECG 382 (536)
T ss_dssp CCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEE
T ss_pred CCCCCccEEEEeccccccCCCccccccccCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCccc
Confidence 456789999999988864332 2222356889998885 47889999999999886554 7999999998743 23444
Q ss_pred EeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCC--CCCccCCCCCCCCCCceeeeeccccccE
Q psy14886 326 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP--SPQYNTPADKPYQAPSRIGGGGGKIGDL 403 (505)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~--~~~~~t~~~~p~~~P~~~~~~~~~~~~v 403 (505)
.....................+.+ |.|++.|.|+|.|.|..|.+.++.. ...+.|.+. +|..+.+...+.++|
T Consensus 383 ~c~~~~~~~~~~~~~~~ts~tI~g-L~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~----~Ps~~~~~~~s~tSV 457 (536)
T 3fl7_A 383 PCEASVRYSEPPHGLTRTSVTVSD-LEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQT----EPPKVRLEGRSTTSL 457 (536)
T ss_dssp ECCTTCEESSCSSSBCSSEEEEEC-CCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSC----CCCEEEEEECCC-CC
T ss_pred ccCCCceEEEeecCCccceeEeCC-CCCCCEEEEEEEEEecCCCCCCCCccceeEEeeccc----CCCCCceeeccCCeE
Confidence 332221100000001233445555 9999999999999999998543211 113444333 455555567788999
Q ss_pred EEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEe
Q psy14886 404 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIW 483 (505)
Q Consensus 404 ~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~ 483 (505)
.|+|++ +.+.++.|++|+|+|+..+.. ....... ...+.+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.+.
T Consensus 458 ~LsW~p--P~~~ng~I~~Y~V~y~~~~~~-~~~~~v~----~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~ 530 (536)
T 3fl7_A 458 SVSWSI--PPPQQSRVWKYEVTYRKKGDS-NSYNVRR----TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQ 530 (536)
T ss_dssp EEEEEC--CTTTTTTCSEEEEEEEEC--C-CCCEEEE----ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEE
T ss_pred EEEEEC--CcCCCCcccEEEEEEEECCCC-ceEEEEc----CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEE
Confidence 999998 467889999999999988744 2212222 234678999999999999999999999999999999999
Q ss_pred ecce
Q psy14886 484 HDPL 487 (505)
Q Consensus 484 t~p~ 487 (505)
|.+.
T Consensus 531 T~~~ 534 (536)
T 3fl7_A 531 TLSP 534 (536)
T ss_dssp CCC-
T ss_pred eCCC
Confidence 9764
No 96
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.91 E-value=1.6e-23 Score=176.19 Aligned_cols=170 Identities=23% Similarity=0.445 Sum_probs=132.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE-ECCeEEEEcCCCCCCCeEEEEEEEcccCceE--e
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTRY--S 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~--~ 77 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+... ...++.. .+++|.|.+++ .+|+|.|+|.+.+..+... .
T Consensus 14 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~~~~~~~~~~~ 87 (189)
T 2v5t_A 14 FKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTI-----SDNRFAMLANNNLQILNIN-KSDEGIYRCEGRVEARGEIDFR 87 (189)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEC-----CBC-----CCTTEEECTTSCEEETTCC-GGGCEEEEEEEEETTTTEEEEE
T ss_pred EeCCCcEEEEEEEcCCCCCEEEEEECCccceec-----cCCeEEEecCCCEEEeeCC-HhHCcEEEEEEEEcCCCceEEE
Confidence 468999999999999899999999999877632 3455554 46789999999 9999999999998765433 3
Q ss_pred eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEee-CCCEEEcCCCCCCCEE
Q psy14886 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGI 156 (505)
Q Consensus 78 ~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~-~~~l~i~~v~~~d~G~ 156 (505)
.+.+.|.. +|.+..........+.+|+.+.|.|.+.+.|.+.+.|+++|..+....+..... ++.|.|.++..+|+|.
T Consensus 88 ~~~l~v~~-~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 166 (189)
T 2v5t_A 88 DIIVIVNV-PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGP 166 (189)
T ss_dssp EEEEEEEE-EEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEE
T ss_pred EEEEEecC-CCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCee
Confidence 45566664 555554443335678899999999999999999999999999988766655543 4569999999999999
Q ss_pred EEEEEEcCCCceeeeEEEEEE
Q psy14886 157 YSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 157 y~C~~~~~~g~~~~~~~l~v~ 177 (505)
|+|.|.|..|.....+.|.|.
T Consensus 167 Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 167 YVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEeCCCceeEEEEEEEE
Confidence 999999999998888888774
No 97
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.91 E-value=6.7e-23 Score=172.35 Aligned_cols=164 Identities=24% Similarity=0.474 Sum_probs=130.1
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEE-CCEECcCCCCCCCCCCcEEEE-C---CeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFR-NGELLNSETLPLEDQDRYFIQ-D---NVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~-~~~~l~~~~~~~~~~~~~~~~-~---~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
+.+|++++|.|.+.+.|. .+.|+| ++..+. ...++... . .+|.|.+++ .+|+|.|+|.+.+..+..
T Consensus 14 v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~-------~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~~~~g~~ 84 (189)
T 2v44_A 14 LSVGESKFFTCTAIGEPE-SIDWYNPQGEKII-------STQRVVVQKEGVRSRLTIYNAN-IEDAGIYRCQATDAKGQT 84 (189)
T ss_dssp EETTCCEEEEEEEEECCS-EEEEECTTSCBCC-------CCSSEEEEEETTEEEEEECSCC-GGGCEEEEEEEECTTSCE
T ss_pred EecCCcEEEEEEeecCCe-eEEEEeCCCCccC-------CCceEEEECCCCeEEEEEccCC-cccCeEEEEEEEeCCCCc
Confidence 368999999999998877 999999 777665 34455442 2 489999999 999999999999987765
Q ss_pred -EeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEec--CCCcEEEeeCCCEEEcCCCCC
Q psy14886 76 -YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRD 152 (505)
Q Consensus 76 -~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~--~~~~~~~~~~~~l~i~~v~~~ 152 (505)
...+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++....++.|.|.++..+
T Consensus 85 ~~~~~~l~v~~-~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 161 (189)
T 2v44_A 85 QEATVVLEIYQ-KLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKS 161 (189)
T ss_dssp EEEEEEEEEEC-CCEEESCC--CSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGG
T ss_pred EEEEEEEEEec-CCceeecC--CcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcc
Confidence 4567777775 56555444 33568899999999999999999999999988775 355677777789999999999
Q ss_pred CCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 153 DSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 153 d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
|+|.|+|.|.|..+.......+.|
T Consensus 162 d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 162 DEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp GCEEEEEEEEETTTTEEEEEEEEE
T ss_pred cCeEEEEEEEccccCceeeeeEEE
Confidence 999999999999877655544433
No 98
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.90 E-value=9.1e-24 Score=179.26 Aligned_cols=165 Identities=17% Similarity=0.261 Sum_probs=124.5
Q ss_pred CCCCCceEEEEEEec-cCCCeEEEEECCEECcCCCCCCCCCCcEEEEC--C--eEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 1 MDNQADLTWTCEAFG-VPDVTYSWFRNGELLNSETLPLEDQDRYFIQD--N--VLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~-~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~--~--~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
|.+|+.+.|.|.+.+ .|.+.|+|+|||.+|..+ ...++.... + +|.|.+++ .+|+|.|+|.|.| |..
T Consensus 14 v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~-----~~~~~~~~~~~g~~~L~I~~v~-~~D~G~Y~C~a~N--g~a 85 (207)
T 3rbs_A 14 ILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG-----PKYKMHIDRNTGIIEMFMEKLQ-DEDEGTYTFQLQD--GKA 85 (207)
T ss_dssp ECGGGCEEEEEECSCCCSCCEEEEEETTEEECSS-----SSCEEEECTTTCEEEEEESCCC-GGGCEEEEEEEEE--TTE
T ss_pred EEeCCeEEEEEEEecCCCCCEEEEEECCEECccC-----CCEEEEEeCCCCEEEEEECCCC-hhhCEEEEEEEEC--CCe
Confidence 468999999999964 789999999999999732 112222222 2 69999999 9999999999998 444
Q ss_pred EeeEEEEEEe--------------------cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCCeEEEEECCEEecCCC
Q psy14886 76 YSSAQLRVLT--------------------LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIGSGG 134 (505)
Q Consensus 76 ~~~~~l~v~~--------------------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~i~W~~~g~~~~~~~ 134 (505)
.....+.+.. .+|.|.... ...+.+|+.+.|.|.+.|. |.+.+.|+|+|..+..+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~---~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~ 162 (207)
T 3rbs_A 86 TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL---SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE 162 (207)
T ss_dssp EEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE---EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC
T ss_pred EEEEEEEEEccchhhhcccccccccccccCCCCceEecC---CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC
Confidence 4444332210 134443222 3568899999999999998 899999999999997655
Q ss_pred cEEEee-CCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 135 RRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 135 ~~~~~~-~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
++.... ..+|.|.++..+|+|.|+|.|.|..|.....+.|.+
T Consensus 163 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 163 KHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 432221 235999999999999999999999999888887754
No 99
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.90 E-value=2.3e-23 Score=181.25 Aligned_cols=190 Identities=21% Similarity=0.232 Sum_probs=145.2
Q ss_pred CCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCce
Q psy14886 277 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356 (505)
Q Consensus 277 ~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 356 (505)
.++.+|.++.+.....+++.|+|+++ ++.+.+|.|+|+..+...+...... .....+.+.+ |.+++.
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~i~~-L~p~t~ 70 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHLLD---------SKVPSVELTN-LYPYCD 70 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEEEE---------ESSSEEEECS-CCTTCE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCCccceEEEc---------CCccEEEECC-CCCCCE
Confidence 47889999999999999999999987 3578999999987654322111000 1233455555 999999
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCC---
Q psy14886 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE--- 433 (505)
Q Consensus 357 y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~--- 433 (505)
|.|+|+|.|..|.|.++... .+.|.+..|. +|.++.+...+.++|.|.|++ +...+|.|.+|+|+|+..+...
T Consensus 71 Y~~~V~A~n~~G~g~~s~~~-~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~ 146 (234)
T 3f7q_A 71 YEMKVCAYGAQGEGPYSSLV-SCRTHQEVPS-EPGRLAFNVVSSTVTQLSWAE--PAETNGEITAYEVCYGLVNDDNRPI 146 (234)
T ss_dssp EEEEEEEEETTEECCCCCCE-EEECCCCCCC-CCCCCEEEECSSSCEEEECCC--CSCCSSCCCEEEEEEEEBCTTSCBS
T ss_pred EEEEEEEEeCCCcCCCCCeE-EEEcCCCCCC-CCCccEEEEecCCEEEEEEcC--CCCCCCceeEEEEEEEECCCCCCcc
Confidence 99999999999999887664 6667666664 688899988889999999998 4567889999999999876433
Q ss_pred --cEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCce-EEEeecc
Q psy14886 434 --FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEV-VTIWHDP 486 (505)
Q Consensus 434 --~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~-~~~~t~p 486 (505)
|..... .....+.+.|.+|.|++.|.|+|+|+|.+|.|++|+. +.+.|.+
T Consensus 147 ~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~ 199 (234)
T 3f7q_A 147 GPMKKVLV---DNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQP 199 (234)
T ss_dssp SCCEECCC---SCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSC
T ss_pred CcceEEEe---cCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCC
Confidence 221111 1223467899999999999999999999999999985 5565543
No 100
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.90 E-value=9e-21 Score=177.29 Aligned_cols=296 Identities=14% Similarity=0.124 Sum_probs=197.2
Q ss_pred CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEE--eeccEEEEEEeeec-CCCCeEEEEEeC
Q psy14886 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--AHRNLQLRCSAHTE-ELLDVAYIWTHN 219 (505)
Q Consensus 143 ~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~--~g~~~~l~C~~~~~-~~~~~~~~w~~~ 219 (505)
.+.+.++.......|+..+.+..|..... ...+...++ .+..+.+. ....+.|.|..... ....+.+.|...
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~-~~~~~~~~~----~p~~l~~~~~~~~si~l~W~~p~~~~~~~Y~v~~~~~ 133 (368)
T 1fnf_A 59 SCTFDNLSPGLEYNVSVYTVKDDKESVPI-SDTIIPAVP----PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPV 133 (368)
T ss_dssp EEECCCCCTTSCEEEEEEEEETTEECCCE-EEEECCCCC----CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEET
T ss_pred EEEECCCCCCCEEEEEEEEEcCCCccCce-eeeecCCCc----CCceeEEEEcCCCeEEEEeeCCCCCCCcEEEEEEEEC
Confidence 46777888777777888888877644322 222222111 12233332 24567788876522 222345555542
Q ss_pred CEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEe
Q psy14886 220 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 299 (505)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w 299 (505)
+... .. ...........+.+..+.....+.|+..|.|..|... ........+|.+|.++.+.....+++.|+|
T Consensus 134 ~~~~---~~---~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~~~~~~P~~l~~~~~~~~sv~l~W 206 (368)
T 1fnf_A 134 KNEE---DV---AELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHEST-PLRGRQKTGLDSPTGIDFSDITANSFTVHW 206 (368)
T ss_dssp TCTT---CC---EEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCCEEEEEESCCSSEEEEEE
T ss_pred CCCC---cc---EEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCC-CeEeeecCCCCCCCccEEEEccCCEEEEEE
Confidence 2110 00 0011112345788888888888888889988877543 233444566778888888888999999999
Q ss_pred ecCCCCCCCCceEEEEEEeCCC-CCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCC
Q psy14886 300 TDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 378 (505)
Q Consensus 300 ~~~~~~~~~i~~y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~ 378 (505)
.++. +.+.+|.|+++.... ..+...... .....+.+.+ |.+++.|.|+|.|.|..|.+.++..
T Consensus 207 ~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~---------~~~~~~~i~~-L~p~t~Y~~~V~A~n~~g~~~~~~~--- 270 (368)
T 1fnf_A 207 IAPR---ATITGYRIRHHPEHFSGRPREDRVP---------HSRNSITLTN-LTPGTEYVVSIVALNGREESPLLIG--- 270 (368)
T ss_dssp ECCS---SCCSEEEEEEECSCCSSCCEEEEEE---------TTCCEEEEES-CCTTCEEEEEEEEEETTEECCCEEE---
T ss_pred eCCC---CCcCEEEEEEecCCCCCCccEEEeC---------CCcCEEEECC-CCCCCEEEEEEEEEeCCccCCcccc---
Confidence 9863 568899999987754 333332111 1223445554 9999999999999999998875432
Q ss_pred ccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCC-cEEEEeeecCceeeEEEEcCCccc
Q psy14886 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFY 457 (505)
Q Consensus 379 ~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~L~p 457 (505)
....++.+|.++.+.....++|.|.|+++.. .+.+|.|+|+..+... +....+.. ..+.+.+.+|.|
T Consensus 271 ---~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~-----~i~~Y~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~p 338 (368)
T 1fnf_A 271 ---QQSTVSDVPRDLEVVAATPTSLLISWDAPAV-----TVRYYRITYGETGGNSPVQEFTVPG----SKSTATISGLKP 338 (368)
T ss_dssp ---EEECCCCSCEEEEEEEEETTEEEEEEECCSS-----CCSEEEEEEEETTCCSCCEEEEEET----TCCEEEECSCCT
T ss_pred ---cccCCCCCCCeeEEEecCCCEEEEEeeCCCC-----ccceEEEEEEECCCCCccEEEEcCC----CeeEEEecCCCC
Confidence 2344556788999988889999999998422 4899999999877432 23222222 346789999999
Q ss_pred eeeEEEEEEEecCCCCCCCCc
Q psy14886 458 YTEYEVKVQAINDVGPGPESE 478 (505)
Q Consensus 458 ~~~Y~~~v~a~n~~G~g~~s~ 478 (505)
++.|.|+|+|+|..|.|++|.
T Consensus 339 ~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 339 GVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp TCCEEEEEEEECCCSSSCCBC
T ss_pred CCEEEEEEEEeCCCCcCcccC
Confidence 999999999999999999886
No 101
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.90 E-value=7.5e-21 Score=178.27 Aligned_cols=299 Identities=12% Similarity=0.092 Sum_probs=200.1
Q ss_pred CCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEE--eeccEEEEEEeeec-CCCCeEEEEEe
Q psy14886 142 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--AHRNLQLRCSAHTE-ELLDVAYIWTH 218 (505)
Q Consensus 142 ~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~--~g~~~~l~C~~~~~-~~~~~~~~w~~ 218 (505)
..+.+.++.......|+..+.+..|..... .+.....++ .+..+.+. ....+.|.|..... +...+.+.|..
T Consensus 59 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~-~~~~~~~~p----~p~~l~~~~~~~~si~l~W~~~~~~~i~~Y~v~~~~ 133 (375)
T 3t1w_A 59 SSCTFDNLSPGLEYNVSVYTVKDDKESVPI-SDTIIPEVP----QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVA 133 (375)
T ss_dssp CEEEECCCCTTCCEEEEEEEEETTEECCCE-EEEECCCCC----CCSCCEEECCCSSEEEEECCCCCCTTEEEEEEEEEE
T ss_pred cEEEEcCCcCCCEEEEEEEEEcCCCCCCcE-EeeEcCCCC----CCceEEEEecCCCeEEEEEECCCCCCceEEEEEEEE
Confidence 357888888877777777787766543332 222222111 12333333 34467777765421 12234445554
Q ss_pred CCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEE
Q psy14886 219 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQ 298 (505)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~ 298 (505)
.+..... ...........+.+..+.....+.|+..|.|..|........ ....|.+|.++.+.....+++.|+
T Consensus 134 ~~~~~~~------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~-~~t~~~~p~~l~~~~~~~~si~l~ 206 (375)
T 3t1w_A 134 AGEGIPI------FEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLT-QQTAVPPPTDLRFTNIGPDTMRVT 206 (375)
T ss_dssp SSSCCSC------EEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEE-EECCCCCCEEEEEESCCSSCEEEE
T ss_pred CCCCCce------eEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeee-eecCCCCCceeEEEecccCEEEEE
Confidence 3321100 001122234578899999888889999999988864433322 222455788888888899999999
Q ss_pred eecCCCCCCCCceEEEEEEeCCC-CCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCC
Q psy14886 299 WTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 377 (505)
Q Consensus 299 w~~~~~~~~~i~~y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~ 377 (505)
|.++. +..+.+|.|+++.... ..|....... ....+.+.+ |.+++.|.|+|.|.|..|.+.++..
T Consensus 207 W~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~---------~~~~~~i~~-L~p~t~Y~~~V~A~~~~g~s~~~~~-- 272 (375)
T 3t1w_A 207 WAPPP--SIDLTNFLVRYSPVKNEEDVAELSISP---------SDNAVVLTN-LLPGTEYVVSVSSVYEQHESTPLRG-- 272 (375)
T ss_dssp EECCS--SCCCCEEEEEEEEGGGTTCCEEEEECT---------TCCEEEECS-CCTTCEEEEEEEEEETTEECCCEEE--
T ss_pred EcCCC--CCCccEEEEEEEeCCCCCCcEEEEcCC---------CcCEEEeCC-CCCCCEEEEEEEEEcCCCcCCceee--
Confidence 99874 4668999999987753 4444432211 123444444 9999999999999999998875533
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCC-CCcEEEEeeecCceeeEEEEcCCcc
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEF 456 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~L~ 456 (505)
...+ ++.+|.++.+.....+++.|.|+++ .+.+.+|.|+|+..+. ..+....... ..+.+.|.+|.
T Consensus 273 ~~~t----~p~~P~~l~~~~~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~~~~~~~~~~----~~~~~~i~~L~ 339 (375)
T 3t1w_A 273 RQKT----GLDSPTGIDFSDITANSFTVHWIAP-----RATITGYRIRHHPEHFSGRPREDRVPH----SRNSITLTNLT 339 (375)
T ss_dssp EEEC----CCCCCEEEEEESCCSSCEEEEEECC-----SSCCSEEEEEEEETTCCSSCEEEEEET----TCCEEEECSCC
T ss_pred EEec----CCCCCCccEeeeccCCEEEEEECCC-----CcceeeEEEEEEECCCCCcceeEEcCC----CccEEEECCCC
Confidence 2233 4457889999888899999999983 2779999999999875 5555444333 34678999999
Q ss_pred ceeeEEEEEEEecCCCCCCCCce
Q psy14886 457 YYTEYEVKVQAINDVGPGPESEV 479 (505)
Q Consensus 457 p~~~Y~~~v~a~n~~G~g~~s~~ 479 (505)
|++.|.|+|+|+|..|.|++..-
T Consensus 340 p~t~Y~~~V~A~~~~G~s~p~s~ 362 (375)
T 3t1w_A 340 PGTEYVVSIVALNGREESPLLIG 362 (375)
T ss_dssp TTCEEEEEEEEEETTEECCCEEE
T ss_pred CCCEEEEEEEEECCCCCCCceee
Confidence 99999999999999999987643
No 102
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.90 E-value=6.4e-23 Score=173.41 Aligned_cols=163 Identities=19% Similarity=0.339 Sum_probs=130.9
Q ss_pred CCCCCceEEEEEEe-ccCCCeEEEEECCEECcCCCCCCCCCCcEEEE-----------CCeEEEEcCCCCCCCeEEEEEE
Q psy14886 1 MDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ-----------DNVLTIRYLNPERDPAMYQCRA 68 (505)
Q Consensus 1 v~~G~~~~l~C~~~-~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~-----------~~~L~i~~~~~~~d~G~Y~C~~ 68 (505)
+.+|++++|.|.+. +.|.+.+.|+|++..+... ...++.+. .++|.|.+++ .+|+|.|+|.+
T Consensus 14 v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~ 87 (195)
T 2c5d_C 14 GARGLTGTLRCQLQVQGEPPEVHWLRDGQILELA-----DSTQTQVPLGEDEQDDWIVVSQLRITSLQ-LSDTGQYQCLV 87 (195)
T ss_dssp ECTTCCEEEEEEEEEESSCCCCEEEETTEECCSC-----EEEEEEEECSSSTTSEEEEEEEEEESSCC-STTCEEEEEEE
T ss_pred EecCCcEEEecccccCCCCcEEEEEECCEEcccC-----CCCceEEEEccccccceeeccEEEEEecc-ccCCcEEEEEE
Confidence 46899999999999 8899999999999998742 11223321 3589999999 99999999999
Q ss_pred EcccCceEee-EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCC-eEEEEECCEEecCCCcEEEeeCCCEEE
Q psy14886 69 KNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGNLLI 146 (505)
Q Consensus 69 ~~~~~~~~~~-~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~l~i 146 (505)
.+..+..... +.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+ .+.|++++..+...... ..++.|.|
T Consensus 88 ~~~~~~~~~~~~~l~V~~-~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~--~~~~~L~i 162 (195)
T 2c5d_C 88 FLGHQTFVSQPGYVGLEG-LPYFLEEP--EDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH--GPQRSLHV 162 (195)
T ss_dssp EETTEEEECCCEEEEECC-SCEEEECC--CCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS--SCCEEEEE
T ss_pred EeCCCceecccEEEEEec-CCeEEcCC--CcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc--CCCCeEEE
Confidence 9977665544 7888875 67665554 34678899999999999999999 99999999888654432 34556999
Q ss_pred cCCCCCCCEEEEEEEEcCCCcee-eeEEEEE
Q psy14886 147 SPVSRDDSGIYSCTATNVHGMDE-SKGRLIV 176 (505)
Q Consensus 147 ~~v~~~d~G~y~C~~~~~~g~~~-~~~~l~v 176 (505)
.++. |+|.|+|.|.|..|... ..+.|.|
T Consensus 163 ~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 163 PGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 9887 78999999999999886 5788877
No 103
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.90 E-value=2.3e-22 Score=169.59 Aligned_cols=164 Identities=30% Similarity=0.590 Sum_probs=132.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE--CCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ--DNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~--~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+.. ..++... +.+|.|.+++ .+|+|.|+|.+.+..+.....
T Consensus 16 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~-------~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~~~~~~~~~~ 87 (192)
T 2va4_A 16 AERGEEMTFSCRASGSPEPAISWFRNGKLIEE-------NEKYILKGSNTELTVRNII-NSDGGPYVCRATNKAGEDEKQ 87 (192)
T ss_dssp TTSCCCEEEECEEECSSCCEEEEEETTEECCC-------SSSEEEETTTTEEEECSCC-GGGCEEEEEEEEETTEEEEEE
T ss_pred EecCCCEEEEEeeccCCCCeEEEEECCeEcCC-------CccEEEeCCeeEEEEecCC-hhcCcEEEEEEEccccccceE
Confidence 56899999999999989999999999999873 3455553 4689999999 999999999999988877777
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEEecC-----CCcEEEee---CCCEEEcC
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIGS-----GGRRKIFE---NGNLLISP 148 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~~~~-----~~~~~~~~---~~~l~i~~ 148 (505)
+.|.|.. +|.+... ....+.+|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..++.... ...|.|.+
T Consensus 88 ~~l~V~~-~p~~~~~---~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 163 (192)
T 2va4_A 88 AFLQVFV-QPHIIQL---KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKD 163 (192)
T ss_dssp EEEEEEE-EEEEEEE---CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEES
T ss_pred EEEEEEc-cCccccc---CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEec
Confidence 8888875 4544332 224577899999999999999999999998 666543 23333332 24699999
Q ss_pred CCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 149 VSRDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 149 v~~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
+..+|+|.|+|.|.|..|.....+.|.|
T Consensus 164 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 164 VKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 9999999999999999999888888776
No 104
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.90 E-value=8.8e-23 Score=175.30 Aligned_cols=196 Identities=14% Similarity=0.151 Sum_probs=143.9
Q ss_pred EcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeec-cC
Q psy14886 275 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL-VP 353 (505)
Q Consensus 275 v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~ 353 (505)
+..+|.+|.++.+......++.|+|+++.+.+. ..+|.|+|+......+.-.. .........+.+| .+
T Consensus 4 ~g~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~-~~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~~~ 72 (215)
T 1bqu_A 4 SGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKA----------KRDTPTSCTVDYSTVY 72 (215)
T ss_dssp -CCCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEEC----------CSSCTTEEECSSCCCT
T ss_pred cCCCCCCCEeeEeEECCCCcEEEEcCCCCCCCC-CceEEEEEEEcCCCcccccc----------ccCCcceEEEcCCccc
Confidence 456899999999988888999999999887654 47999999876432221110 1122233444449 99
Q ss_pred CceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeecc--ccccEEEEEEeCCccccCCCCceEEEEEEEcCC
Q psy14886 354 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG--KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 431 (505)
Q Consensus 354 ~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~--~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~ 431 (505)
++.|.|+|.|.|..|.+. +... .+.+....++.+|.++.+... +.+++.|+|++ +...++.+++|.|+|+..+.
T Consensus 73 ~t~Y~~~V~A~n~~G~~~-s~~~-~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~y~~~~~ 148 (215)
T 1bqu_A 73 FVNIEVWVEAENALGKVT-SDHI-NFDPVYKVKPNPPHNLSVINSEELSSILKLTWTN--PSIKSVIILKYNIQYRTKDA 148 (215)
T ss_dssp TSCEEEEEEEEETTEEEE-CCCE-EECGGGSEECCCCEEEEEECC--CCSCEEEEEEC--CGGGGTSCEEEEEEEEETTC
T ss_pred cccEEEEEEEEecccCcc-CCcE-EecccccCcCCCCCceEEEEecCCCceEEEEEeC--CCCCCcceEEEEEEEccCCC
Confidence 999999999999999986 3222 344445556779999988754 67899999998 44567899999999999887
Q ss_pred CCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCC---CCceEEEeecc
Q psy14886 432 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP---ESEVVTIWHDP 486 (505)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~---~s~~~~~~t~p 486 (505)
..|....... .....+.+.|.+|.|++.|.|+|+|.|.+|.|+ +|+.+.+.|.+
T Consensus 149 ~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 149 STWSQIPPED-TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp SSCEECCGGG-GCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred CCceEecccc-ccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 7787543211 112346789999999999999999999999976 55666666653
No 105
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=5e-21 Score=186.28 Aligned_cols=264 Identities=14% Similarity=0.169 Sum_probs=162.5
Q ss_pred CCCCCceEEEEEEeccCC----CeEEEEEC--CEECc----CCC-----CCCCCCCcEEEE------CCeEEEEcCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVPD----VTYSWFRN--GELLN----SET-----LPLEDQDRYFIQ------DNVLTIRYLNPER 59 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~----~~~~W~~~--~~~l~----~~~-----~~~~~~~~~~~~------~~~L~i~~~~~~~ 59 (505)
+.+|++++|.|.+.+.+. ..+.|+|+ +..+. ... ......+|+.+. ..+|.|.+++ .+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~ 90 (512)
T 1zvo_C 12 VKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMS-AA 90 (512)
T ss_pred EcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCC-HH
Confidence 468999999999986542 68999995 22110 000 001124577653 2589999999 99
Q ss_pred CCeEEEEEEEcccC-----------c--eEeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eE
Q psy14886 60 DPAMYQCRAKNQLK-----------T--RYSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KF 121 (505)
Q Consensus 60 d~G~Y~C~~~~~~~-----------~--~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i 121 (505)
|+|.|.|.+.+..+ . ....+.|.|... +|.+.... +.......|+.++|.|.+.+. |.+ .|
T Consensus 91 Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~-~~~~~~~~~~~v~L~C~~~g~~P~p~~v 169 (512)
T 1zvo_C 91 DTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPII-SGCRHPKDNSPVVLACLITGYHPTSVTV 169 (512)
T ss_pred HCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEecc-CCcccccCCCeEEEEEEEEeeecCceEE
Confidence 99999999987542 1 112456777632 23332111 111101246899999999887 665 99
Q ss_pred EEEECCEEecC-CCcEEEeeC------CCEEEcCCCCCCCEEEEEEEEcCCCceeeeE-----------EEEEEeC----
Q psy14886 122 VWKKDGNIIGS-GGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKG-----------RLIVLHG---- 179 (505)
Q Consensus 122 ~W~~~g~~~~~-~~~~~~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~-----------~l~v~~~---- 179 (505)
.|++++..... ........+ ..|.|.....+ .|.|+|.|.|..+...... .+.+..+
T Consensus 170 ~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp~~~ 248 (512)
T 1zvo_C 170 TWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAE 248 (512)
T ss_pred EEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCCchh
Confidence 99996543210 000011112 23778777777 8999999999887655443 2333222
Q ss_pred ------------------------------------------------CeeeeeCCCceEEEeeccEEEEEEeeecCCCC
Q psy14886 180 ------------------------------------------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 211 (505)
Q Consensus 180 ------------------------------------------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 211 (505)
|.+....+....+..|+.+.|.|.+.+..++.
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~ 328 (512)
T 1zvo_C 249 GSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKD 328 (512)
T ss_pred ccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceECCC
Confidence 22222222233355799999999999875556
Q ss_pred eEEEEEeCCEEecCCCC-C---cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE
Q psy14886 212 VAYIWTHNGVRIGNMDL-N---ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268 (505)
Q Consensus 212 ~~~~w~~~~~~~~~~~~-~---~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~ 268 (505)
+.+.|.++|..+..... . ...... ....+.|.|.....+|.|.|+|.|.|..+...
T Consensus 329 ~~i~W~k~g~~~~~~~~~~~~~~~~~gt-~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~ 388 (512)
T 1zvo_C 329 AHLTWEVAGKVPTGGVEEGLLERHSNGS-QSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ 388 (512)
T ss_pred eEEEEEECCEeccCceeccceecCCCCe-EEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC
Confidence 78999999987652110 0 000111 11224688888888899999999999887543
No 106
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.90 E-value=1.5e-22 Score=173.69 Aligned_cols=166 Identities=19% Similarity=0.224 Sum_probs=127.9
Q ss_pred CCCceEEEEEEec-cCCCeEEEEECCEECcCCCCCCCCCCcEEE--EC--CeEEEEcCCCCCCCeEEEEEEEcccCceEe
Q psy14886 3 NQADLTWTCEAFG-VPDVTYSWFRNGELLNSETLPLEDQDRYFI--QD--NVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77 (505)
Q Consensus 3 ~G~~~~l~C~~~~-~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~--~~--~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~ 77 (505)
+|+.+.|.|.+.+ .|.+.++|+|++.++.. ..++.+ .+ .+|.|.+++ .+|+|.|+|.+.|..+....
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~-------~~~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~~~n~~~~~~~ 87 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRY-------SDRVKTGVTGEQIWLQINEPT-PNDKGKYVMELFDGKTGHQK 87 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCC-------CSSEEEEEETTEEEEEEESCC-GGGCEEEEEEEECSSCEEEE
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccC-------CCeEEEEEeCCEEEEEECCCC-cccCEEEEEEEecCCcceEE
Confidence 3455566666655 45899999999999873 344443 33 359999999 99999999999997777665
Q ss_pred eEEEEEEe-------------------cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEE
Q psy14886 78 SAQLRVLT-------------------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 138 (505)
Q Consensus 78 ~~~l~v~~-------------------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~ 138 (505)
.+.|.|.. ..|.+.... +....+.+|+.+.|.|.+.+.|.+.+.|+++|..+....++.+
T Consensus 88 ~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~ 166 (212)
T 2r15_A 88 TVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGL-PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNL 166 (212)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBC-CSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEE
T ss_pred EEEEEEeeccchhhhccccCcccccccCCCcccccC-CCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEE
Confidence 56555431 022222211 3456789999999999999999999999999999987766665
Q ss_pred eeC-C---CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEE
Q psy14886 139 FEN-G---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 139 ~~~-~---~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~ 177 (505)
... + .|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 167 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 167 KFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp EEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 543 3 79999999999999999999999998888888875
No 107
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.90 E-value=3.4e-24 Score=206.47 Aligned_cols=258 Identities=17% Similarity=0.255 Sum_probs=159.4
Q ss_pred CCCCCceEEEEEEecc-CC-CeEEEEECCEECcCCCCC--CCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGV-PD-VTYSWFRNGELLNSETLP--LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~-p~-~~~~W~~~~~~l~~~~~~--~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
+.+|+.++|.|.+.+. |. +.|.|+|++..+...... ....+++.. .+.|.|.+++ .+| |.|+|.|.|..+...
T Consensus 144 ~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~s~L~i~~~~-~~d-G~Y~C~a~n~~~~~~ 220 (457)
T 1hzh_H 144 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-SSVVTVPSSS-LGT-QTYICNVNHKPSNTK 220 (457)
T ss_dssp CCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEE-EEEEEECSGG-GGT-SCCEEEEEEGGGTEE
T ss_pred ccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEE-EEEEEecccc-cCC-ceEEEEEEeCCCCcc
Confidence 3589999999999885 64 899999998654311000 011223322 2479999999 889 999999999776654
Q ss_pred eeEEEEEEec----------------CCCccCCCCCceEEeeCCCeEEEEeecCCCCCC----eEEEEECCEEecCCCcE
Q psy14886 77 SSAQLRVLTL----------------KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP----KFVWKKDGNIIGSGGRR 136 (505)
Q Consensus 77 ~~~~l~v~~~----------------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~----~i~W~~~g~~~~~~~~~ 136 (505)
....+.+... +|.+...+......+.+|+++.|.|.+.|.+++ .|.|++++..+......
T Consensus 221 ~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~ 300 (457)
T 1hzh_H 221 VDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTK 300 (457)
T ss_dssp EEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEE
T ss_pred eeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccc
Confidence 4443333210 122111111111115679999999999987543 99999999887543211
Q ss_pred --EEeeCCCEEEcC---CCCCC---CEEEEEEEEcCCCceeeeEEEE----EEeCCeeeeeCCCceEEEeeccEEEEEEe
Q psy14886 137 --KIFENGNLLISP---VSRDD---SGIYSCTATNVHGMDESKGRLI----VLHGPSYYEQLPPKITIAAHRNLQLRCSA 204 (505)
Q Consensus 137 --~~~~~~~l~i~~---v~~~d---~G~y~C~~~~~~g~~~~~~~l~----v~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 204 (505)
....++.+.+.. +...| +|.|+|.|.|..+.......+. +..+|.+....+....+..|+ +.|.|.+
T Consensus 301 ~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~ 379 (457)
T 1hzh_H 301 PREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLV 379 (457)
T ss_dssp EEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEE
T ss_pred cceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEE
Confidence 122345555543 23445 9999999998755443333332 233455444433333334555 9999999
Q ss_pred eecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecC------CeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 205 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG------GLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 205 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~------~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.+.+++.+.+.|+++|..+..... .......+ +.|.+.....++.|.|+|.|.|....
T Consensus 380 ~g~~p~~~~v~W~k~g~~l~~~~~----~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 380 KGFYPSDIAVEWESNGQPENNYKT----TPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp EEEBSSCCEEEEEETTEECCCEEE----CCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EeEECCCCEEEEEECCEECcceee----cCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCC
Confidence 998766678899999988753210 00011111 23445555556789999999997654
No 108
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.90 E-value=1.4e-22 Score=170.73 Aligned_cols=166 Identities=24% Similarity=0.429 Sum_probs=131.3
Q ss_pred CCCCCceEEEEEEeccC-CCeEEEEE-CCEECcCCCCCCCCCCcEEEE-----CCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFGVP-DVTYSWFR-NGELLNSETLPLEDQDRYFIQ-----DNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-~~~~~W~~-~~~~l~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
+.+|++++|.|.+.+.+ .+.+.|+| ++..+.. ...++... .++|.|.+++ .+|+|.|+|.+.+..+
T Consensus 14 v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~------~~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~~~~~ 86 (191)
T 1epf_A 14 ISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSP------NQQRISVVWNDDDSSTLTIYNAN-IDDAGIYKCVVTAEDG 86 (191)
T ss_dssp EETTCCEEEEEEECCCSCCCEEEEECTTSCEECC------BSSSEEEEEEETTEEEEEECSCC-GGGCEEEEEEEEETTT
T ss_pred EcCCCCEEEEEECCCCCCCceEEEEeCCCccccC------CCCeEEEEECCCCceEEEEccCC-cccCEEEEEEEEcCCC
Confidence 36899999999998876 79999999 8887763 23444442 3689999999 9999999999998874
Q ss_pred -ceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecC--CCcEEEeeCCCEEEcCCC
Q psy14886 74 -TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVS 150 (505)
Q Consensus 74 -~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~--~~~~~~~~~~~l~i~~v~ 150 (505)
.....+.|.|.. +|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++....++.|.|.++.
T Consensus 87 ~~~~~~~~l~v~~-~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 163 (191)
T 1epf_A 87 TQSEATVNVKIFQ-KLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK 163 (191)
T ss_dssp EEEEEEEEEEEEC-CSEEEECC--SSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCC
T ss_pred cceEEEEEEEeec-CceEecCC--CcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCC
Confidence 444567777774 56655544 345688999999999999999999999999998753 446666667789999999
Q ss_pred CCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 151 RDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
.+|+|.|+|.|.|..+.......+.|
T Consensus 164 ~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 164 KTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp GGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred hhhCEEEEEEEEEecceeEEEEEEEE
Confidence 99999999999998865544444443
No 109
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.89 E-value=1.2e-21 Score=178.17 Aligned_cols=261 Identities=21% Similarity=0.342 Sum_probs=165.6
Q ss_pred cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe--eC---CCEEEcCCCC-CCCEEEEE
Q psy14886 86 LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--EN---GNLLISPVSR-DDSGIYSC 159 (505)
Q Consensus 86 ~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~--~~---~~l~i~~v~~-~d~G~y~C 159 (505)
.+|.|...+ ....+.+|+++.|.|.+.|.|.+.+.|+++|..+... +.... .+ ..|.|.++.. .|+|.|+|
T Consensus 5 ~~P~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C 81 (304)
T 2yd9_A 5 EPPRFIKEP--KDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYEC 81 (304)
T ss_dssp CCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEE
T ss_pred cCCeeeecC--CceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEE
Confidence 356666554 4567899999999999999999999999999887543 33322 22 3599999998 99999999
Q ss_pred EEEcCCCceeeeEEEEEEeCC------eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccC
Q psy14886 160 TATNVHGMDESKGRLIVLHGP------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233 (505)
Q Consensus 160 ~~~~~~g~~~~~~~l~v~~~p------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 233 (505)
.|.|..|.....+.|.|...+ +.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ..
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~--~v~W~k~~~~~~~~~~---~~ 156 (304)
T 2yd9_A 82 VAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDP--EITWFKDFLPVDPSAS---NG 156 (304)
T ss_dssp EEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCC--EEEEEETTEECCGGGG---TT
T ss_pred EEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCC--eEEEEECCEECcCCCC---cc
Confidence 999999988888889987652 223334556678889999999999887765 6779999988764321 01
Q ss_pred CeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE-EEEEEcCCCCCCCce----EEEEEeCCeEEEEeecCCCCCCC
Q psy14886 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK-TTVIVEGPPGLPGGV----QVVEVHKTSATIQWTDGATNGRP 308 (505)
Q Consensus 234 ~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~-~~l~v~~~p~~p~~~----~~~~~~~~~v~l~w~~~~~~~~~ 308 (505)
.........|.|..+..+|.|.|+|.|.|..|..... ..+.+.....+|... ......+..+.|.|..
T Consensus 157 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~------- 229 (304)
T 2yd9_A 157 RIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVA------- 229 (304)
T ss_dssp SEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEE-------
T ss_pred eEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEE-------
Confidence 1223345689999999999999999999999876533 455554322222100 0112234556666653
Q ss_pred CceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 309 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 309 i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
...+.....|......+.... ....+...+.+. ...+.+.|+|.|.|..|...
T Consensus 230 ------~g~p~p~v~W~~~~~~l~~~~-~~~~~~~~L~i~---~~~d~G~Y~C~a~N~~G~~~ 282 (304)
T 2yd9_A 230 ------VGSPMPYVKWMQGAEDLTPED-DMPVGRNVLELT---DVKDSANYTCVAMSSLGVIE 282 (304)
T ss_dssp ------EEESCCEEEEEETTEECSCSS-SCCBSEEEEEEC---SCCSCEEEEEEEEETTEEEE
T ss_pred ------eeeCCCEEEEEECCEECCCcc-cccCCcEEEEEc---ccccCEEEEEEEEeCCCcEE
Confidence 222222233443322222110 000111122222 33567899999999999764
No 110
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.89 E-value=1.1e-21 Score=168.19 Aligned_cols=186 Identities=25% Similarity=0.490 Sum_probs=144.1
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEec-CCCcEEEee--C--CCEEEcCCCC-CCCEEEEEE
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE--N--GNLLISPVSR-DDSGIYSCT 160 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~-~~~~~~~~~--~--~~l~i~~v~~-~d~G~y~C~ 160 (505)
+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|+++|..+. ...++.... + ..|.|.++.. .|+|.|+|.
T Consensus 6 pP~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 6 PPEIIRKP--QNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp CCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCEEEcCC--CceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 56666654 44678999999999999999999999999999886 444554432 2 3699999999 999999999
Q ss_pred EEcCCCc-eeeeEEEEEEeCC------eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccC
Q psy14886 161 ATNVHGM-DESKGRLIVLHGP------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 233 (505)
Q Consensus 161 ~~~~~g~-~~~~~~l~v~~~p------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 233 (505)
+.|..|. ....+.|.|...+ +.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+....
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~------ 155 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTP--NIYWIKNQTKVDMSN------ 155 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCC--EEEEEETTEECCTTS------
T ss_pred EEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCC--eEEEEECCeEcccCC------
Confidence 9999988 6677888887652 223334556677889999999999988765 577999998886532
Q ss_pred CeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE-EEEEEcCCCCCC
Q psy14886 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK-TTVIVEGPPGLP 282 (505)
Q Consensus 234 ~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~-~~l~v~~~p~~p 282 (505)
......++.|.|..+..+|.|.|+|.|.|..|..... +.|.|...+..+
T Consensus 156 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~ 205 (212)
T 2yd1_A 156 PRYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGT 205 (212)
T ss_dssp TTEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C-
T ss_pred CeEEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccccc
Confidence 2234456799999999999999999999999988764 788887765443
No 111
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.89 E-value=3.2e-25 Score=212.17 Aligned_cols=261 Identities=14% Similarity=0.160 Sum_probs=163.2
Q ss_pred CCCCceEEEEEEecc-CCC-eEEEEECCEECcCCCC-CCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 2 DNQADLTWTCEAFGV-PDV-TYSWFRNGELLNSETL-PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~-p~~-~~~W~~~~~~l~~~~~-~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
.+|+.++|.|.+.|. |.+ .|.|+|++..+..... .....+.+.. .+.|.|.+++ .+| |.|+|.|.|..+.....
T Consensus 132 ~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~-~s~L~i~~~~-~~d-g~Y~C~a~n~~~~~~~~ 208 (434)
T 1igy_B 132 QTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL-SSSVTVPSSP-RPS-ETVTCNVAHPASSTKVD 208 (434)
T ss_dssp CCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEE-EEEEEEETTT-TTS-SCCEEEEECTTTTCCEE
T ss_pred CCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEE-EEEEEEcchh-cCC-CcEEEEEEeCCCCccce
Confidence 589999999999885 765 9999999875421100 0001133333 3579999999 889 99999999988774433
Q ss_pred EEEEEEe-------c-C---CCccCCCCCceEEeeCCCeEEEEeecCCCC----CCeEEEEECCEEecCCCcEE------
Q psy14886 79 AQLRVLT-------L-K---PSFKKRPLESETYAGEGGNVTIFCNPEAAP----KPKFVWKKDGNIIGSGGRRK------ 137 (505)
Q Consensus 79 ~~l~v~~-------~-~---p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p----~~~i~W~~~g~~~~~~~~~~------ 137 (505)
..+.+.. . . |.+...+......+.+|+.+.|.|.+.|.+ .+.|.|++++..+.......
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~ 288 (434)
T 1igy_B 209 KKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFN 288 (434)
T ss_dssp EECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCS
T ss_pred eeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCC
Confidence 3332210 0 0 222221111111178899999999999884 35899999987764321110
Q ss_pred --EeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEE----EEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCC
Q psy14886 138 --IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 211 (505)
Q Consensus 138 --~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 211 (505)
....+.|.|.++..+|+|.|+|.|.|..|.......+ .+..+|.+....+... ...|..+.|.|.+.+.+++.
T Consensus 289 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~ 367 (434)
T 1igy_B 289 STFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKE-QMAKDKVSLTCMITDFFPED 367 (434)
T ss_dssp SSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSS-SSSSSEEEEEEEEEEEBCSC
T ss_pred CcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHH-HhcCCcEEEEEEEEeeECCC
Confidence 0113469999999999999999999988865332222 2223444433322221 23466799999999976556
Q ss_pred eEEEEEeCCEEecCCCCCcc--cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 212 VAYIWTHNGVRIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 212 ~~~~w~~~~~~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
+.+.|+++|..+........ .........+.|.+.....++.|.|+|.|.|....
T Consensus 368 ~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 368 ITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred eEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 78899999987743210000 00000111134566666667799999999997654
No 112
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.89 E-value=7.1e-22 Score=198.44 Aligned_cols=217 Identities=19% Similarity=0.337 Sum_probs=160.6
Q ss_pred CCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCC-CceEEEEEeCCeEEEEeecCCC-CCCCCceEEEEEEeCCC------
Q psy14886 250 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLP-GGVQVVEVHKTSATIQWTDGAT-NGRPITHYKIIARTNWN------ 321 (505)
Q Consensus 250 ~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p-~~~~~~~~~~~~v~l~w~~~~~-~~~~i~~y~v~~~~~~~------ 321 (505)
.+..|.+.| +.|..|..-......+...|.+| .++.+..+..+++.|+|.++.+ ++.++. |.|+|+....
T Consensus 132 ~~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~ 209 (680)
T 1zlg_A 132 NECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSED 209 (680)
T ss_pred ccCCCcccc-ccccccccccccceeeecccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCcc
Confidence 345666777 34555653222223357788888 7999999999999999999864 456667 9999997632
Q ss_pred --CCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCC-CCCCCCceeeeecc
Q psy14886 322 --STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD-KPYQAPSRIGGGGG 398 (505)
Q Consensus 322 --~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~-~p~~~P~~~~~~~~ 398 (505)
..|..+... ....+.+.+ |.|++.|.|+|.|.|..|.+.++.....+.+... .|+.+|.++.+...
T Consensus 210 ~~~~w~~v~~~----------~~~~~~i~~-L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~ 278 (680)
T 1zlg_A 210 DATHWQTVAQT----------TDERVQLTD-IRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANS 278 (680)
T ss_pred ccCceEEEEec----------CCCeEEeCC-CCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeee
Confidence 567765431 223445555 9999999999999999995545555446666554 78889999999877
Q ss_pred --ccc---cEEEEEEeCCccccCCCCceEEEEEEEc-C------CCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEE
Q psy14886 399 --KIG---DLSISWEPLPREKQNAPNIYYKIFWRKK-N------DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466 (505)
Q Consensus 399 --~~~---~v~l~W~~~~~~~~~~~i~~Y~v~~~~~-~------~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~ 466 (505)
+.+ +|.|.|++ +.+.+++|.+|+|+|+.. + ...|....+.. ..+.+.|.+|.|++.|.|+|.
T Consensus 279 ~~~~~g~~sv~l~W~p--P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~----~~~~~~l~~L~p~t~Y~~~V~ 352 (680)
T 1zlg_A 279 TVNSDGSVTVTIVWDL--PEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDG----FQNSVILEKLQPDCDYVVELQ 352 (680)
T ss_pred eecCCCceEEEEEecC--CCCCCCceeEEEEEEEecccccccCCccceEEEEEcC----CeeEEEeCCCCCCCEEEEEEE
Confidence 777 99999998 445679999999999932 1 22455443332 346789999999999999999
Q ss_pred EecCCCCCCCCce---EEEeec
Q psy14886 467 AINDVGPGPESEV---VTIWHD 485 (505)
Q Consensus 467 a~n~~G~g~~s~~---~~~~t~ 485 (505)
|+|.+|.|++|.. +.+.|.
T Consensus 353 A~n~~G~g~~S~~~~~v~~~T~ 374 (680)
T 1zlg_A 353 AITYWGQTRLKSAKVSLHFTST 374 (680)
T ss_pred EEECCCcCCCCCCceeEEEECC
Confidence 9999999999987 666664
No 113
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.89 E-value=1e-20 Score=173.07 Aligned_cols=260 Identities=17% Similarity=0.136 Sum_probs=171.9
Q ss_pred ceEEeeCCCeEEEEeecCCCC-CCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
..+.+..|++++|.|.+.+.+ .+.|.|++++..+..........++.|.|.++...|+|.|+|. ..|.....+.|.
T Consensus 14 ~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~---~~g~~~~~~~L~ 90 (325)
T 1n26_A 14 GVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCY---RAGRPAGTVHLL 90 (325)
T ss_dssp TEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEE---SSSSCSCEEEEE
T ss_pred CcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCccccccccccceEEecccchhhCeEeEEE---eCCEEeeeEEEE
Confidence 334457999999999988764 6799999987655322222334567899999999999999999 367777778899
Q ss_pred EEeCCeeeeeCCCceEEE-eeccEEEEEEeeecC----CCCeEEEEEeC-C---EEecCCCCCcccCCee-eecCCeEEE
Q psy14886 176 VLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEE----LLDVAYIWTHN-G---VRIGNMDLNELETPNI-NIDGGLLEI 245 (505)
Q Consensus 176 v~~~p~~~~~~~~~~~~~-~g~~~~l~C~~~~~~----~~~~~~~w~~~-~---~~~~~~~~~~~~~~~~-~~~~~~l~i 245 (505)
|..+|.. +. +... .+....+.|.+.... ...+.+.+.+. + ..... .. ... ......+.+
T Consensus 91 V~~pP~~----P~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~~~~~-~c-----~~~~~~~~~~c~i 159 (325)
T 1n26_A 91 VDVPPEE----PQ-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQE-PC-----QYSQESQKFSCQL 159 (325)
T ss_dssp ECCCCCC----CC-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCEEEEE-EE-----EEETTTTEEEEEE
T ss_pred eccCCCC----Cc-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCCcccc-cC-----CCCCCCCCEEEEE
Confidence 8776642 22 3333 344446666665321 11223333221 1 00000 00 000 001124556
Q ss_pred ecCC-CCCCEEEEEEEEecCCcEEE-EEEEEE--cCCCCCCCceEEEEEeC--CeEEEEeecCCC--CCCCCceEEEEEE
Q psy14886 246 TNAS-FADAGEYECVVKSTVGKIST-KTTVIV--EGPPGLPGGVQVVEVHK--TSATIQWTDGAT--NGRPITHYKIIAR 317 (505)
Q Consensus 246 ~~~~-~~~~g~y~C~~~n~~g~~~~-~~~l~v--~~~p~~p~~~~~~~~~~--~~v~l~w~~~~~--~~~~i~~y~v~~~ 317 (505)
..+. ....+.|+|.|.|..|.... ...+.+ ..+|.+|.++.+..... +++.|+|++|.. .+..+..|.|+|+
T Consensus 160 ~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr 239 (325)
T 1n26_A 160 AVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYR 239 (325)
T ss_dssp CCCTTCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEE
T ss_pred CCCcccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEE
Confidence 6554 34677889999999998542 223322 35688998888877653 589999999875 4567899999999
Q ss_pred eCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCcc
Q psy14886 318 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 380 (505)
Q Consensus 318 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~ 380 (505)
......|....... ....+.+.+ |.+++.|+|||+|.|..|.|.+|.++..+.
T Consensus 240 ~~~~~~W~~~~~~~---------~~~~~~l~~-L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~ 292 (325)
T 1n26_A 240 AERSKTFTTWMVKD---------LQHHCVIHD-AWSGLRHVVQLRAQEEFGQGEWSEWSPEAM 292 (325)
T ss_dssp ETTCSCCEEEECGG---------GCSEEEESS-CCTTCCEEEEEEEEETTTBSCCCCCCCCEE
T ss_pred eCCCCCCEEEcccC---------CceEEEEeC-CCCCCeEEEEEEEecCCCCCCCcCCCCccc
Confidence 98888898754321 122444444 999999999999999999999999875543
No 114
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.89 E-value=1.2e-23 Score=177.49 Aligned_cols=165 Identities=16% Similarity=0.172 Sum_probs=120.1
Q ss_pred CCCCceEEEEEE---eccCCCeEEEEECCEECcCCC----------CCCCCCCcEEE--E--CCeEEEEcCCCCCCCeEE
Q psy14886 2 DNQADLTWTCEA---FGVPDVTYSWFRNGELLNSET----------LPLEDQDRYFI--Q--DNVLTIRYLNPERDPAMY 64 (505)
Q Consensus 2 ~~G~~~~l~C~~---~~~p~~~~~W~~~~~~l~~~~----------~~~~~~~~~~~--~--~~~L~i~~~~~~~d~G~Y 64 (505)
..|++++|.|.+ .+.|.+.|+|+|+|..+.... ......+++.+ . ..+|.|.+++ .+|+|.|
T Consensus 6 ~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y 84 (203)
T 4fa8_A 6 FLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAAN-ISHDGNY 84 (203)
T ss_dssp ETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCC-GGGCEEE
T ss_pred EcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCC-HHHCeEE
Confidence 479999999964 567899999999864332100 00001122322 1 2479999999 9999999
Q ss_pred EEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEec----CCCcEEEee
Q psy14886 65 QCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG----SGGRRKIFE 140 (505)
Q Consensus 65 ~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~----~~~~~~~~~ 140 (505)
+|.|.|..|.....+.|.|.. ||.+...+ ....+.+|+++.|.|.+.|.|.|.|.|++++..+. ...++....
T Consensus 85 ~C~a~n~~g~~~~~~~l~V~~-p~~~~~~~--~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~ 161 (203)
T 4fa8_A 85 LCRMKLGETEVTKQEHLSVVK-PLTLSVHS--ERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEK 161 (203)
T ss_dssp EEEEEETTEEEEEEEEEEEEE-EEEEEEEE--EECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECT
T ss_pred EEEEEcCCCcEEEEEEEEecC-Cceeeecc--eeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeC
Confidence 999999988888888888885 55554433 44567899999999999999999999998665432 244566667
Q ss_pred CCCEEE---cCCCCCCCEEEEEEEEcCCCceee
Q psy14886 141 NGNLLI---SPVSRDDSGIYSCTATNVHGMDES 170 (505)
Q Consensus 141 ~~~l~i---~~v~~~d~G~y~C~~~~~~g~~~~ 170 (505)
+++|.+ .++..+|+|.|+|.|.|..|....
T Consensus 162 ~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 162 DGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp TSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 777655 588999999999999999998764
No 115
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.89 E-value=3.5e-22 Score=166.86 Aligned_cols=159 Identities=19% Similarity=0.445 Sum_probs=127.9
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEE--EE----CCeEEEEcCCCCCCCeEEEEEEEcccCc
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYF--IQ----DNVLTIRYLNPERDPAMYQCRAKNQLKT 74 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~--~~----~~~L~i~~~~~~~d~G~Y~C~~~~~~~~ 74 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+.. ..+.. .. .++|.|.+++ .+|+|.|+|.+.+..+.
T Consensus 14 v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~-------~~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~~~~~~ 85 (182)
T 1rhf_A 14 VSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQN-------LDQLYIPVSEQHWIGFLSLKSVE-RSDAGRYWCQVEDGGET 85 (182)
T ss_dssp EETTCCEEEEEEEESCSSCCEEEEETTEECCS-------SEEEEEEEETTEEEEEEEESSCC-GGGCEEEEEEESSCTTC
T ss_pred EeCCCcEEEEEEEeCCCCCeEEEEECCeecCC-------CCceEEEecCCCceEEEEEeecC-cccCeEEEEEEEcCCCc
Confidence 36899999999999988899999999998873 22332 22 2689999999 99999999999988665
Q ss_pred eE-eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCC-eEEEEECCEEecCCCcEEEeeCCCEEEcCCCCC
Q psy14886 75 RY-SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 152 (505)
Q Consensus 75 ~~-~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~ 152 (505)
.. ..+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.|.+ .+.|++++..+..... ....|.|.++ +
T Consensus 86 ~~~~~~~l~V~~-~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~----~~~~L~i~~~--~ 156 (182)
T 1rhf_A 86 EISQPVWLTVEG-VPFFTVEP--KDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP----SPSVLNVTGV--T 156 (182)
T ss_dssp EECCCEEEEEEC-SCEEEECC--CCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE----SSEEEEECCC--S
T ss_pred EEEEEEEEEEec-CCeEEecC--cceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC----CceEEEEecc--c
Confidence 43 467888885 67666654 34678999999999999999998 9999999998864321 4556889887 5
Q ss_pred CCEEEEEEEEcCCCceee-eEEEEE
Q psy14886 153 DSGIYSCTATNVHGMDES-KGRLIV 176 (505)
Q Consensus 153 d~G~y~C~~~~~~g~~~~-~~~l~v 176 (505)
|+|.|+|.|.|..|.... .+.|.|
T Consensus 157 d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 157 QSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCeEEEEEEECCCCCcccceEEEEe
Confidence 899999999999988754 566665
No 116
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.89 E-value=3.7e-21 Score=173.71 Aligned_cols=263 Identities=18% Similarity=0.244 Sum_probs=177.6
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEE-CCEEecCCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEE
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTAT 162 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~-~g~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~ 162 (505)
+|.+...+ ....+.+|+.+.|.|.+.+.|. .+.|++ +|..+....+..+..++ .|.|.++..+|+|.|+|.+.
T Consensus 4 ~p~v~~~~--~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~ 80 (291)
T 2wim_A 4 LLQVTISL--SKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQAT 80 (291)
T ss_dssp CCEEEESC--SEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CceEEEec--cceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEe
Confidence 44454444 4567999999999999998875 999999 77777666666665554 69999999999999999999
Q ss_pred cCCCcee-eeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCC
Q psy14886 163 NVHGMDE-SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241 (505)
Q Consensus 163 ~~~g~~~-~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (505)
+..|... ..+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.+.+ .+.|++++..+..... .......+.
T Consensus 81 n~~g~~~~~~~~l~v~~~~~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~----~~~~~~~~~ 153 (291)
T 2wim_A 81 DAKGQTQEATVVLEIYQKLTFRE-VVSPQEFKQGEDAEVVCRVSSSPAP--AVSWLYHNEEVTTISD----NRFAMLANN 153 (291)
T ss_dssp CSSSCEEEEEEEEEEECCCBCCS-CCCSEEEETTSCEEECCCCBCSSCC--EEEEECC----CBCCC----SSEEECTTS
T ss_pred cccCceEEEEEEEEecCCcceEe-CCCChhhcCCCCEEEEEEEccCCCC--EEEEEECCccccccCC----ceEEEccCC
Confidence 9888764 456777766665443 3456678899999999999987655 5679998877653211 122223456
Q ss_pred eEEEecCCCCCCEEEEEEEEecCCcE--EEEEEEEEcCCCCCCCce---EEEEEeCCeEEEEeecCCCCCCCCceEEEEE
Q psy14886 242 LLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGPPGLPGGV---QVVEVHKTSATIQWTDGATNGRPITHYKIIA 316 (505)
Q Consensus 242 ~l~i~~~~~~~~g~y~C~~~n~~g~~--~~~~~l~v~~~p~~p~~~---~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~ 316 (505)
.|.|..+..+|.|.|+|.+.|..+.. ...+.+.+..+|...... ......+..+.|.|... +.|...+.|..
T Consensus 154 ~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~---g~p~p~v~W~~ 230 (291)
T 2wim_A 154 NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRAS---GSPEPAISWFR 230 (291)
T ss_dssp CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCC---CBSCCEEEEEE
T ss_pred CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEee---cCCCCeEEEEE
Confidence 89999999999999999999987553 355667777766543211 22334577899999842 33333344332
Q ss_pred EeCCCCCeEEeeeccccceeeee-cCceeeEEeeeccCCceeEEEEEEEcCCCcCCCC
Q psy14886 317 RTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 373 (505)
Q Consensus 317 ~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s 373 (505)
. ...+........ .....+.+.. +...+.+.|+|.|.|..|....+
T Consensus 231 --~--------g~~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~N~~G~~~~~ 277 (291)
T 2wim_A 231 --N--------GKLIEENEKYILKGSNTELTVRN-IINSDGGPYVCRATNKAGEDEKQ 277 (291)
T ss_dssp --T--------TEECCCTTTEEECSTTCEEEEES-CCSTTCEEEEEEEEETTEEEEEE
T ss_pred --C--------CEECcCCccEEEcCCccEEEEee-CCcccCEEEEEEEEECCCceeee
Confidence 1 111110000011 1223455555 99999999999999999987543
No 117
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.89 E-value=1.2e-21 Score=167.33 Aligned_cols=195 Identities=19% Similarity=0.192 Sum_probs=147.9
Q ss_pred CCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCce
Q psy14886 277 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356 (505)
Q Consensus 277 ~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 356 (505)
.+|++|.++.+......++.++|+++.+.+.+ ..|.|+|+..+...|..+...... ......+...+|.+++.
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~~-~~Y~l~y~~~~~~~~~~c~~~~~~------~~~~c~~~~~~l~~~~~ 74 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGLP-TNYSLTYHREGETLMHECPDYITG------GPNSCHFGKQYTSMWRT 74 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSCCC-SEEEEEEEETTCCCCEECSCSSTT------CTTEEEECGGGCCSSSC
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCCCC-ceEEEEEEECCCCccccCCCCCCC------CCeEEEeCCCCccccee
Confidence 57999999999888999999999998866554 689999998776778776432210 01112222234899999
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeecc----ccccEEEEEEeCCcccc-CC-CCceEEEEEEEcC
Q psy14886 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG----KIGDLSISWEPLPREKQ-NA-PNIYYKIFWRKKN 430 (505)
Q Consensus 357 y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~----~~~~v~l~W~~~~~~~~-~~-~i~~Y~v~~~~~~ 430 (505)
|.|+|.|.|..|.+.. ... .+.+....++.||.++.+... ..+++.|+|++|..... +| .+++|.|+|+..+
T Consensus 75 Y~~~V~A~N~~G~~~s-~~~-~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~ 152 (210)
T 3n06_B 75 YIMMVNATNQMGSSFS-DEL-YVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEK 152 (210)
T ss_dssp EEEEEEEEETTEEEEC-CCE-EECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTT
T ss_pred EEEEEEEEcCCCCeeC-CcE-EEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCC
Confidence 9999999999998843 222 345555667789999988744 35899999999544332 24 5689999999988
Q ss_pred CCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCC-CCCCceEEEeec
Q psy14886 431 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP-GPESEVVTIWHD 485 (505)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~-g~~s~~~~~~t~ 485 (505)
...|..... ...+.+.|.+|.|++.|.|+|+|.|..|. |++|+.+.+.|+
T Consensus 153 ~~~~~~~~~-----~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp 203 (210)
T 3n06_B 153 AAEWEIHFA-----GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 203 (210)
T ss_dssp CSSCEEEEE-----ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCEEEec-----cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence 778875421 12357889999999999999999999998 999999999885
No 118
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.89 E-value=4.9e-21 Score=173.58 Aligned_cols=259 Identities=15% Similarity=0.186 Sum_probs=169.5
Q ss_pred eEEeeCCCeEEEEeecCC-------CCCCeEEEEECCEEecCCCcEEEeeC--CCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 98 ETYAGEGGNVTIFCNPEA-------APKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~-------~p~~~i~W~~~g~~~~~~~~~~~~~~--~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
+..+..|++++|.|.+.+ .|.+.|.|+++|..+... ++.+... +.|.|.++...+ |.|+|.|.+. |..
T Consensus 13 ~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~~~~~~~L~i~~~~~~~-g~Y~C~a~~~-g~~ 89 (303)
T 1i1r_A 13 SPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTIINRTASSVTFTDIASLN-IQLTCNILTF-GQL 89 (303)
T ss_dssp SCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEEETTEEEEEECSCCCSE-EEEEEEEEET-TTE
T ss_pred CceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeeeCCcEEEEEEcCcCCCc-eEEEEecccC-CCc
Confidence 356889999999999985 477899999999988643 4344332 369999999884 9999999874 333
Q ss_pred e---eeEEEEEEeCCeeeeeCCCceEEEe--eccEEEEEEeeecCC--CCeEEEEEeCCEEecCCCCCcccCCeeeecCC
Q psy14886 169 E---SKGRLIVLHGPSYYEQLPPKITIAA--HRNLQLRCSAHTEEL--LDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241 (505)
Q Consensus 169 ~---~~~~l~v~~~p~~~~~~~~~~~~~~--g~~~~l~C~~~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (505)
. ..+.+.+..+|.. +..+.+.. ...+.|.|....... ..+.+.+...+..... . ........
T Consensus 90 ~~~~~~~~l~v~~~P~~----P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~~-----~--~~~~~~~~ 158 (303)
T 1i1r_A 90 EQNVYGITIISGLPPEK----PKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFAD-----C--KAKRDTPT 158 (303)
T ss_dssp EEEEEEEEEEEECCCCC----CEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCC-----E--ECCSSCTT
T ss_pred ceEEEEEEEeccCCCCC----CeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCcc-----C--CCcCCCce
Confidence 2 2244555444432 22222222 134555554332211 1233333332221100 0 00111235
Q ss_pred eEEEecC-CCCCCEEEEEEEEecCCcEEE-EEEEEE--cCCCCCCCceEEEEE--eCCeEEEEeecCCCCCCCCceEEEE
Q psy14886 242 LLEITNA-SFADAGEYECVVKSTVGKIST-KTTVIV--EGPPGLPGGVQVVEV--HKTSATIQWTDGATNGRPITHYKII 315 (505)
Q Consensus 242 ~l~i~~~-~~~~~g~y~C~~~n~~g~~~~-~~~l~v--~~~p~~p~~~~~~~~--~~~~v~l~w~~~~~~~~~i~~y~v~ 315 (505)
.+.+..+ .....+.|++.|.|..|.... ...+.. ..+|.+|..+.+... ..+++.|+|++|...++++.+|.|+
T Consensus 159 ~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~ 238 (303)
T 1i1r_A 159 SCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQ 238 (303)
T ss_dssp EEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEE
T ss_pred EEEECCcCcccccEEEEEEEEcCCCCcccCCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEE
Confidence 6788888 778889999999999998643 222222 246888888877654 5689999999998767789999999
Q ss_pred EEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCC
Q psy14886 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 377 (505)
Q Consensus 316 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~ 377 (505)
|+..+...|..+..... ......+.+.+|.+++.|.|+|+|.|..|.|.+|.++.
T Consensus 239 y~~~~~~~w~~~~~~~~-------~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~ 293 (303)
T 1i1r_A 239 YRTKDASTWSQIPPEDT-------ASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSE 293 (303)
T ss_dssp EEETTCSSCEECCGGGG-------CSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCC
T ss_pred EEeCCCCCceEEccccC-------CCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCC
Confidence 99988788987532100 01223344444999999999999999999999988763
No 119
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.89 E-value=2.9e-22 Score=171.88 Aligned_cols=173 Identities=21% Similarity=0.361 Sum_probs=130.7
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcC-----CCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC--
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNS-----ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK-- 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~-----~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~-- 73 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+.. .........++...+++|.|.+++ .+|+|.|+|.+.+..+
T Consensus 13 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~-~~D~G~Y~C~~~~~~g~~ 91 (212)
T 1f97_A 13 VPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVT-RKDNGEYTCMVSEEGGQN 91 (212)
T ss_dssp EETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCC-GGGCEEEEEEEEETTSSS
T ss_pred EEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccC-cccCeEEEEEEEccCCCc
Confidence 35899999999999889999999998755210 000111356778888999999999 9999999999998866
Q ss_pred ceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEee-cCCCCCCeEEEEECCE-EecCCCc---------EEE-eeC
Q psy14886 74 TRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCN-PEAAPKPKFVWKKDGN-IIGSGGR---------RKI-FEN 141 (505)
Q Consensus 74 ~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~-~~~~p~~~i~W~~~g~-~~~~~~~---------~~~-~~~ 141 (505)
.....+.|.|.. +|.+...+. ...+.+|+.+.|.|. +.+.|.+.+.|++++. .+..... +.. ...
T Consensus 92 ~~~~~~~l~V~~-~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 168 (212)
T 1f97_A 92 YGEVSIHLTVLV-PPSKPTISV--PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKS 168 (212)
T ss_dssp EEEEEEEEEEEB-CCCCCEEEC--CSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTT
T ss_pred ccEEEEEEEEEc-CCCCcccCC--ccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCC
Confidence 345567777875 555443332 245789999999999 7888999999999998 7754322 222 235
Q ss_pred CCEEEcCCCCCCCEEEEEEEEcCCCce--eeeEEEEEE
Q psy14886 142 GNLLISPVSRDDSGIYSCTATNVHGMD--ESKGRLIVL 177 (505)
Q Consensus 142 ~~l~i~~v~~~d~G~y~C~~~~~~g~~--~~~~~l~v~ 177 (505)
+.|.|.++..+|.|.|+|.|.|..|.. ...+.|.|.
T Consensus 169 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 169 GDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp CCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred ceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 679999999999999999999999988 444666664
No 120
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.89 E-value=1.2e-20 Score=169.46 Aligned_cols=253 Identities=13% Similarity=0.101 Sum_probs=175.6
Q ss_pred eeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEE
Q psy14886 194 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273 (505)
Q Consensus 194 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l 273 (505)
....+.|.|.....+...+.+.|...... ... ...........+.+.++.....+.|+..|.|..|... ...+
T Consensus 27 ~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~---~~~---~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~ 99 (283)
T 1tdq_A 27 SDTVAFVEWTPPRAKVDFILLKYGLVGGE---GGK---TTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTNESD-ASST 99 (283)
T ss_dssp CSSCEEEEEECCSSCCSEEEEEEEESSSS---CCC---EEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECC-CEEE
T ss_pred CCCeEEEEEECCCCceeEEEEEEEEecCC---CCc---EEEEeCCCCCEEEecCCCCCCEEEEEEEEECCCCCCC-CeeE
Confidence 34567788876542333445555321100 000 0011122346788889988888888889988776643 3445
Q ss_pred EEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecC-ceeeEEeeecc
Q psy14886 274 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG-RKEASIENVLV 352 (505)
Q Consensus 274 ~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~L~ 352 (505)
....+|.+|.++.+.....+++.|+|+++. +.+.+|.|+++......|........ .. ...+.+. +|.
T Consensus 100 ~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~-~L~ 168 (283)
T 1tdq_A 100 QFTTEIDAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVYSTLAGEQYHEVLVPKG-------IGPTTKTTLT-DLV 168 (283)
T ss_dssp EEECCCCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEETTCCCCEEEEEECC-------SSSEEEEEEC-SCC
T ss_pred EEECCCCCCCceEEEecCCCeEEEEecCCC---CCccEEEEEEEeCCCCcceEEECCCC-------CcccceEEEe-cCC
Confidence 566688899999999999999999999875 46899999999876665543321100 01 2344454 499
Q ss_pred CCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC
Q psy14886 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 432 (505)
Q Consensus 353 ~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~ 432 (505)
+++.|.|+|.|.|..|.+.+... ...+ .+.+|.++.+.....+++.|.|+++ ++.+.+|+|+|+..++.
T Consensus 169 p~t~Y~~~V~A~n~~g~s~~~~~--~~~t----~~~~P~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~ 237 (283)
T 1tdq_A 169 PGTEYGVGISAVMNSKQSIPATM--NART----ELDSPRDLMVTASSETSISLIWTKA-----SGPIDHYRITFTPSSGI 237 (283)
T ss_dssp TTCEEEEEEEEEETTEECCCEEE--EEEC----CCCCCEEEEEEEECSSCEEEEEECC-----CSCCSEEEEEEECSSSC
T ss_pred CCCEEEEEEEEEeCCCCCcceEE--EecC----CCCCCCccEEeEecCCEEEEEEeCC-----CCcccEEEEEEEcCCCC
Confidence 99999999999999998754321 1222 2337789999888889999999983 47799999999987643
Q ss_pred CcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceE
Q psy14886 433 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480 (505)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~ 480 (505)
+....... ....+.|.+|.|++.|.|+|+|+|..|.|+++.+.
T Consensus 238 -~~~~~~~~----~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~~~ 280 (283)
T 1tdq_A 238 -SSEVTVPR----DRTSYTLTDLEPGAEYIISITAERGRQQSLESTVD 280 (283)
T ss_dssp -CEEEEEES----SCSEEEECCCCTTCCEEEEEEEEETTEECCCEEEE
T ss_pred -eeEEEeCC----CccEEEECCCCCCCEEEEEEEEEcCCCCCcceeeE
Confidence 33232222 34578999999999999999999999999987653
No 121
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.89 E-value=2.3e-21 Score=175.05 Aligned_cols=254 Identities=20% Similarity=0.304 Sum_probs=169.0
Q ss_pred ceEEeeCCCeEEEEeecCCCC-CCeEEEEE-CCEEecC-CCcEEEee----CCCEEEcCCCCCCCEEEEEEEEcCCCce-
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-KPKFVWKK-DGNIIGS-GGRRKIFE----NGNLLISPVSRDDSGIYSCTATNVHGMD- 168 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-~~~i~W~~-~g~~~~~-~~~~~~~~----~~~l~i~~v~~~d~G~y~C~~~~~~g~~- 168 (505)
....+.+|+.+.|.|.+.+.+ .+.+.|++ +|..+.. ..+..+.. ...|.|.++..+|+|.|+|.+.|..|..
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~ 89 (291)
T 1qz1_A 10 SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQS 89 (291)
T ss_dssp SSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEE
T ss_pred CCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCee
Confidence 445689999999999999886 68999999 7877754 33444332 2469999999999999999999988643
Q ss_pred eeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecC
Q psy14886 169 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248 (505)
Q Consensus 169 ~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 248 (505)
...+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... .......+..|.|..+
T Consensus 90 ~~~~~l~v~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~----~~~~~~~~~~L~i~~~ 162 (291)
T 1qz1_A 90 EATVNVKIFQKLMFKN-APTPQEFKEGEDAVIVCDVVSSLPP--TIIWKHKGRDVILKKD----VRFIVLSNNYLQIRGI 162 (291)
T ss_dssp EEEEEEEEECCSEEEE-CCSSEEEETTSCEEECCEEECSSCC--EEEEEETTSCSSTTCC----TTEEECTTSCEEETTC
T ss_pred EEEEEEEeeccccccC-CCCcccccCCCeEEEEEEeccCCCC--EEEEEECCEEcccCCC----ceEEEccCCcEEEccC
Confidence 4557777766665543 4556778899999999999988765 5779999877643211 1222334568999999
Q ss_pred CCCCCEEEEEEEEecCCcE--EEEEEEEEcCCCCCCC---ceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCC
Q psy14886 249 SFADAGEYECVVKSTVGKI--STKTTVIVEGPPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 323 (505)
Q Consensus 249 ~~~~~g~y~C~~~n~~g~~--~~~~~l~v~~~p~~p~---~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~ 323 (505)
..+|.|.|+|.|.|..+.. ...+.+.+..+|.... ........+..+.|.|... +.|...+.
T Consensus 163 ~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~---g~p~p~i~---------- 229 (291)
T 1qz1_A 163 KKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDAD---GFPEPTMS---------- 229 (291)
T ss_dssp CGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEE---EESCCEEE----------
T ss_pred ccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEE---EeCCCcEE----------
Confidence 9999999999999976443 3456666665543211 1122233456777777632 12222233
Q ss_pred eEEeeeccccce----eeeec-CceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 324 WFNVSEHVIGKE----VDRYT-GRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 324 w~~~~~~~~~~~----~~~~~-~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
|......+.... ..... ....+.+.+ +...+.+.|+|.|.|..|...
T Consensus 230 W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 281 (291)
T 1qz1_A 230 WTKDGEPIENEEEDDEKHIFSDDSSELTIRN-VDKNDEAEYVCIAENKAGEQD 281 (291)
T ss_dssp EEETTEECCCC--CCSSEEECTTSCEEEECS-CCGGGCEEEEEEEEETTEEEE
T ss_pred EEECCEECcCCCCCCcceEEcCCCcEEEEEe-cChhcCEEEEEEEEeCCCceE
Confidence 332222211100 00111 223344444 999999999999999998753
No 122
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.89 E-value=2.5e-21 Score=176.30 Aligned_cols=273 Identities=10% Similarity=0.062 Sum_probs=166.6
Q ss_pred eEEeeCCCeEEEEeecCCC-----CCCeEEEEECCEEecCCCcEEEeeC----CCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 98 ETYAGEGGNVTIFCNPEAA-----PKPKFVWKKDGNIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~-----p~~~i~W~~~g~~~~~~~~~~~~~~----~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
...+..|++++|.|.+.+. |.+.|.|+++|..+..+ +.....+ +.|.|.++...|+|.|.|.+.+..+..
T Consensus 9 ~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~ 87 (313)
T 2d9q_B 9 APIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQI 87 (313)
T ss_dssp CSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEE
T ss_pred CcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEEEecCeEEEEEEEeccCCCccceEEeeecCCCcee
Confidence 3458899999999999986 56899999999877532 2222222 359999999999999999886654444
Q ss_pred eeeEEEEEEeCCeeeeeCCCceEEEee-ccEEEEEEeeecC--CC--CeEEEEEeCCEEecCCCCCcccCCee--eecCC
Q psy14886 169 ESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEE--LL--DVAYIWTHNGVRIGNMDLNELETPNI--NIDGG 241 (505)
Q Consensus 169 ~~~~~l~v~~~p~~~~~~~~~~~~~~g-~~~~l~C~~~~~~--~~--~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~~ 241 (505)
...+.|.+..+|.. +..+.+... ..-.+.|.+.... .. .+.+.+...+....... ...... .....
T Consensus 88 ~~~~~l~v~~~P~~----P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~---~~~~~~~~~~~~~ 160 (313)
T 2d9q_B 88 LDQVELRAGYPPAI----PHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQG---DSILDCVPKDGQS 160 (313)
T ss_dssp EEEEEEEECCCCCC----CEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCC---CCEEEECCCTTCS
T ss_pred EEEEEEccCCCCCC----CccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCC---cccccCCCCCCCc
Confidence 44566777555532 223333222 2233444443221 11 12223322211000000 000000 01123
Q ss_pred eEEEec--CCCCCCEEEEEEEEecCCcEEE-EEEEEEc--CCCCCCCceEEEEE------eCCeEEEEeecCCCCCCCCc
Q psy14886 242 LLEITN--ASFADAGEYECVVKSTVGKIST-KTTVIVE--GPPGLPGGVQVVEV------HKTSATIQWTDGATNGRPIT 310 (505)
Q Consensus 242 ~l~i~~--~~~~~~g~y~C~~~n~~g~~~~-~~~l~v~--~~p~~p~~~~~~~~------~~~~v~l~w~~~~~~~~~i~ 310 (505)
...+.. +.....+.|++.|.|..|.... ...+... .+|.+|.++.+... ..+++.|+|++|...+..+.
T Consensus 161 ~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l 240 (313)
T 2d9q_B 161 HCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQ 240 (313)
T ss_dssp EEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCE
T ss_pred EEEECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeE
Confidence 455543 6777788899999999998532 2223322 36888888777655 46899999999875454457
Q ss_pred eEEEEEE-eCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCC--CccCCCCCCC
Q psy14886 311 HYKIIAR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP--QYNTPADKPY 387 (505)
Q Consensus 311 ~y~v~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~--~~~t~~~~p~ 387 (505)
.|+|+|+ ..+...|........ ....+.+. +|.+++.|.|||+|.|..|.|.+|.++. .+.|.+.+|.
T Consensus 241 ~Y~v~y~~~~~~~~w~~~~~~~~--------~~~~~~l~-~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 241 KCELRHKPQRGEASWALVGPLPL--------EALQYELC-GLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp EEEEEEEESSSCCCCEEEEEECS--------CEEEEEEC-SCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC----
T ss_pred EEEEEEccCCCCCCcEEcccccC--------cceEEEEe-CCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCC
Confidence 9999999 666778987532211 12334444 4999999999999999999998777753 3455555553
No 123
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.88 E-value=4.7e-22 Score=173.08 Aligned_cols=179 Identities=22% Similarity=0.359 Sum_probs=135.9
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|++++|.|.+.+.|.+.+.|+|++..+...... ..........+|.|.+++ .+|+|.|+|.+.|..+.....+.
T Consensus 31 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~~~n~~~~~~~~~~ 107 (231)
T 3ojm_B 31 VPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRI--GGYKVRNQHWSLIMESVV-PSDKGNYTCVVENEYGSINHTYH 107 (231)
T ss_dssp EETTSCEEEECCEEEESCCEEEEEETTEECCGGGST--TCCEEEGGGTEEEECSCC-GGGCEEEEEEEEETTEEEEEEEE
T ss_pred EccCCCEEEEEecccCCCCeEEEEECCccccccccc--cceeeecCcceEEEecCC-cccCEEEEEEEecccCcccccEE
Confidence 358999999999999999999999999988632110 001222245689999999 99999999999998888777888
Q ss_pred EEEEecCCC--ccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEE----CCEEecCCCcEE--Ee--------eCCCE
Q psy14886 81 LRVLTLKPS--FKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK----DGNIIGSGGRRK--IF--------ENGNL 144 (505)
Q Consensus 81 l~v~~~~p~--~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~----~g~~~~~~~~~~--~~--------~~~~l 144 (505)
|.|...++. ...........+.+|+.+.|.|.+.+.|.+.+.|++ +|..+..+.... .. ..+.|
T Consensus 108 l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L 187 (231)
T 3ojm_B 108 LDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVL 187 (231)
T ss_dssp EEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEE
T ss_pred EEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEE
Confidence 888752221 112222355678999999999999999999999999 777665432211 11 12359
Q ss_pred EEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCee
Q psy14886 145 LISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182 (505)
Q Consensus 145 ~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~ 182 (505)
.|.++...|+|.|+|.|.|..|.....+.|.|..+|..
T Consensus 188 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 188 ALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred EEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 99999999999999999999999988899999876654
No 124
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.88 E-value=2.5e-22 Score=176.00 Aligned_cols=179 Identities=25% Similarity=0.373 Sum_probs=133.8
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
|.+|++++|.|.+.+.|.+.+.|+|++..+..... ...........+|.|.+++ .+|+|.|+|.+.+..+.....+.
T Consensus 27 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~--~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~~~~~~~~~~~~~~ 103 (241)
T 3grw_A 27 VPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHR--IGGIKLRHQQWSLVMESVV-PSDRGNYTCVVENKFGSIRQTYT 103 (241)
T ss_dssp EETTSEEEEECCEECSSCCEEEEEETTEECCGGGS--TTCCEEEGGGTEEEECSCC-GGGCEEEEEEEEETTEEEEEEEE
T ss_pred EcCCCeEEEEEEecCCCCceeEEEECCcccCCCCc--ccceeeeccceEEEEEeCC-cccCEEEEEEEeecCCceEEEEE
Confidence 35899999999999999999999999998864211 0111222345789999999 99999999999998888777888
Q ss_pred EEEEecCCCc--cCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEE----CCEEecCCCcEEE-----------eeCCC
Q psy14886 81 LRVLTLKPSF--KKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK----DGNIIGSGGRRKI-----------FENGN 143 (505)
Q Consensus 81 l~v~~~~p~~--~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~----~g~~~~~~~~~~~-----------~~~~~ 143 (505)
+.|...++.. ..........+.+|+.+.|.|.+.+.|.+.+.|++ +|..+..+..... .....
T Consensus 104 l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (241)
T 3grw_A 104 LDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVR 183 (241)
T ss_dssp EEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEE
T ss_pred EEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceE
Confidence 8887532221 11111344668899999999999999999999999 7877654332111 02345
Q ss_pred EEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCee
Q psy14886 144 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 182 (505)
Q Consensus 144 l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~ 182 (505)
|.|.++..+|.|.|+|.|.|..|.....+.|.|..+|..
T Consensus 184 L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 184 LRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAA 222 (241)
T ss_dssp EEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC------
T ss_pred EEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCC
Confidence 999999999999999999999999988899998776654
No 125
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.88 E-value=4.3e-21 Score=161.73 Aligned_cols=186 Identities=22% Similarity=0.395 Sum_probs=144.1
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeC-CCEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~-~~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
||.+...+.+....+.+|+++.|.|.+.+.|.+.+.|++++..+....++.+..+ ..|.|.+++..|+|.|+|.+.+..
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKA 81 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccc
Confidence 5666655545567899999999999999999999999999999887666655433 469999999999999999999998
Q ss_pred CceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeC--CEEecCCCCCcccCCeee--ecCC
Q psy14886 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIGNMDLNELETPNIN--IDGG 241 (505)
Q Consensus 166 g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~--~~~~ 241 (505)
+.....+.|.|..+|.+... ....+..|+.+.|.|.+.+.|.+ .+.|+++ +..+.............. ....
T Consensus 82 ~~~~~~~~l~V~~~p~~~~~--~~~~~~~g~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (192)
T 2va4_A 82 GEDEKQAFLQVFVQPHIIQL--KNETTYENGQVTLVCDAEGEPIP--EITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSS 157 (192)
T ss_dssp EEEEEEEEEEEEEEEEEEEE--CCEEECTTSEEEEEEEEEEESCC--EEEEEETTTTEEECTTCBCTTSCEEEEEETTEE
T ss_pred cccceEEEEEEEccCccccc--CcceEEeCCeEEEEEEecCCCCC--cEEEEeCCCCceeeccccccCCcEEEeeccCce
Confidence 88888888888777766543 24556779999999999998765 4679887 666544221111111111 1235
Q ss_pred eEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 242 ~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
.|.|..+..+|.|.|+|.|.|..|....++.|.|+
T Consensus 158 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 158 SLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 79999999999999999999999998888888773
No 126
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.88 E-value=7.2e-21 Score=171.51 Aligned_cols=251 Identities=17% Similarity=0.130 Sum_probs=174.7
Q ss_pred eeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE-EE
Q psy14886 194 AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK-TT 272 (505)
Q Consensus 194 ~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~-~~ 272 (505)
....+.|.|.........+.+.|...+..-.. ...........+.+..+.....+.|+..|.|..|..... ..
T Consensus 33 ~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~ 106 (290)
T 3r8q_A 33 TPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPM------KEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGV 106 (290)
T ss_dssp CSSCEEEEEECCSSCCCEEEEEEEESSSSSCC------EEEEECTTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEE
T ss_pred CCCEEEEEEeCCCCCeeEEEEEEEeCCCCCce------EEEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCccee
Confidence 34578888876643333456666543211000 001112234578888998888888899999888764332 23
Q ss_pred EEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeecc
Q psy14886 273 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352 (505)
Q Consensus 273 l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 352 (505)
+.....|.+|.++.+......++.|+|.++ ++.+.+|.|+++......+...... .....+.+.+ |.
T Consensus 107 ~~t~~~~~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~i~~-L~ 173 (290)
T 3r8q_A 107 VTTLENVSPPRRARVTDATETTITISWRTK---TETITGFQVDAVPANGQTPIQRTIK---------PDVRSYTITG-LQ 173 (290)
T ss_dssp EECCCCCCCCEEEEEEEECSSCEEEEEECC---SCCCCEEEEEEEESSSCCCEEEEEC---------TTCSEEEECS-CC
T ss_pred EecCCCCCCCceeEEEEcCCCeEEEEEeCC---CCcccEEEEEEEECCCCcceEEecC---------CCccEEEECC-CC
Confidence 333334677888999999999999999986 3568999999988765544332211 1223444554 99
Q ss_pred CCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC
Q psy14886 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 432 (505)
Q Consensus 353 ~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~ 432 (505)
+++.|.|+|.|.|..|.+.+... ...+ ++.+|.++.+...+.+++.|.|+++. +.+.+|.|+|+..+..
T Consensus 174 p~t~Y~~~V~A~n~~g~s~~~~~--~~~t----~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~ 242 (290)
T 3r8q_A 174 PGTDYKIYLYTLNDNARSSPVVI--DAST----AIDAPSNLRFLATTPNSLLVSWQPPR-----ARITGYIIKYEKPGSP 242 (290)
T ss_dssp TTCEEEEEEEEEETTEECCCEEE--EEEC----CCCCCEEEEEEEEETTEEEEEEECCS-----SCCCEEEEEEECTTSC
T ss_pred CCCEEEEEEEEEeCCcccCCEEE--EecC----CCCCCCccEEEeeCCCEEEEEEeCCC-----CcccEEEEEEEeCCCC
Confidence 99999999999999998865332 2222 24578899998888999999999842 4799999999998766
Q ss_pred CcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCC
Q psy14886 433 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 477 (505)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s 477 (505)
.|.... ......+.+.|.+|.|++.|.|+|+|+|..|.|++.
T Consensus 243 ~~~~~~---~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 284 (290)
T 3r8q_A 243 PREVVP---RPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPL 284 (290)
T ss_dssp CEECSS---CCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred cceeEe---ccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCcc
Confidence 554211 112234678999999999999999999999998764
No 127
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.88 E-value=8.7e-22 Score=168.33 Aligned_cols=177 Identities=15% Similarity=0.276 Sum_probs=128.9
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCC------------CCCCCCcEEE-ECCeEEEEcCCCCCCCeEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETL------------PLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCR 67 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~------------~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~ 67 (505)
+.+|++++|.|.+.+.+.+.+.|+|++.......+ .....+|+.+ .+++|.|.+++ .+|+|.|+|.
T Consensus 11 v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~-~~D~G~Y~C~ 89 (208)
T 3r4d_A 11 VAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMIT-MKDMGVYTLD 89 (208)
T ss_dssp EETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCC-GGGCEEEEEE
T ss_pred eecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEcccc-ccCCeEEEEE
Confidence 35899999999987778899999997543221000 0001334444 34689999999 9999999999
Q ss_pred EEccc-CceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeC-CCEE
Q psy14886 68 AKNQL-KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLL 145 (505)
Q Consensus 68 ~~~~~-~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~-~~l~ 145 (505)
+.+.. +.....+.|.|...++...+...... +.+|+.+.|.|.+.+.| +.+.|+++|..+....+.....+ +.|.
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~~~L~ 166 (208)
T 3r4d_A 90 MTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNNSILR 166 (208)
T ss_dssp EECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTTTEEE
T ss_pred EEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCCCEEE
Confidence 99875 44555677777753322222221222 78999999999999876 79999999999987767666544 6799
Q ss_pred EcCCCCCCCEEEEEEEEcCCCceeee-EEEEEEeCCe
Q psy14886 146 ISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPS 181 (505)
Q Consensus 146 i~~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~~p~ 181 (505)
|.++..+|.|.|+|.|.|..|...+. +.|.|..++.
T Consensus 167 i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 167 IDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp ESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred EeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 99999999999999999999987765 6676655443
No 128
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.88 E-value=1.6e-20 Score=166.71 Aligned_cols=236 Identities=17% Similarity=0.133 Sum_probs=165.1
Q ss_pred ceEEeeCCCeEEEEeecCCCCCC-eEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
....+.+|+.+.|.|.+.+.|.+ .+.|+++|..+... +..|.|.++..+|+|.|+|.+.+..+. ..+.+.
T Consensus 9 ~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~-------~~~l~i~~~~~~d~G~Y~C~~~~~~~s--~~~~l~ 79 (262)
T 3rjd_A 9 PWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-------TPSYRITSASVNDSGEYRCQRGLSGRS--DPIQLE 79 (262)
T ss_dssp CCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEEESSSCCC--CCEEEE
T ss_pred CcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc-------CCeEEEecCCcccCeEEEEEEecCCcc--ccEEEE
Confidence 33568899999999999998877 99999999988643 456999999999999999999876543 356677
Q ss_pred EEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEE
Q psy14886 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 255 (505)
Q Consensus 176 v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 255 (505)
|..++.... +....+..|+.+.|.|.+.... +...+.|++++..+... .....|.|..+..+|.|.
T Consensus 80 v~~~~~~~~--~~~~~~~~g~~v~l~C~~~~~~-p~~~v~W~~~g~~~~~~-----------~~~~~l~i~~~~~~d~G~ 145 (262)
T 3rjd_A 80 IHRGWLLLQ--VSSRVFTEGEPLALRCHAWKDK-LVYNVLYYRNGKAFKFF-----------HWNSNLTILKTNISHNGT 145 (262)
T ss_dssp EECSSEEEE--ESCSEEETTSCEEEEEEEGGGC-CCEEEEEEETTEEEEEE-----------EECCCEEESSCCGGGCEE
T ss_pred EeccceEec--CCCeEEecCCeEEEEEEccCCC-CCceEEEEECCcccccc-----------CCCCeEEEEECChhhCEE
Confidence 766554332 3345678899999999994432 24577899999887431 235689999999999999
Q ss_pred EEEEEEecCCcEEEEEEEEEcCCCCCCCceEE----EEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeecc
Q psy14886 256 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQV----VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 331 (505)
Q Consensus 256 y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~----~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~ 331 (505)
|+|.+.|..+..+..+.|.|..++.+|. +.. ....+..+.|.|........+...+.+.+...+ ..+
T Consensus 146 Y~C~~~n~~~~~~~~~~l~V~~~~~~p~-~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~--------~~~ 216 (262)
T 3rjd_A 146 YHCSGMGKHRYTSAGISVTVKELFPAPV-LNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGS--------KTL 216 (262)
T ss_dssp EEEEEESSSEEEEECEEEEEECSSCCCE-EEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETT--------EEE
T ss_pred EEEEEeCCCCccccceEEEeccCCCCCe-EeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCC--------cEe
Confidence 9999999998888888888886543332 211 234577899999853221112222222222211 111
Q ss_pred ccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcC
Q psy14886 332 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 370 (505)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~ 370 (505)
. .......+.+.. +...+.+.|.|.|.|..|..
T Consensus 217 ~-----~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 217 R-----GRNTSSEYQILT-ARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp E-----EEESCCEEEESS-CCGGGCEEEEEEEEETTSSC
T ss_pred c-----ccCCCceEEEEE-echhhCeEEEEEEEcccCce
Confidence 1 001223444555 89999999999999999964
No 129
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.88 E-value=1.2e-21 Score=168.60 Aligned_cols=157 Identities=20% Similarity=0.366 Sum_probs=127.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce-EeeE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR-YSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~-~~~~ 79 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+... .+++|.|.+++ .+|+|.|+|.+.+..+.. ...+
T Consensus 30 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~------------~~~~L~i~~v~-~~d~G~Y~C~~~n~~~~~~s~~~ 96 (218)
T 3k0w_A 30 VLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG------------NTSELIFNAVH-VKDAGFYVCRVNNNFTFEFSQWS 96 (218)
T ss_dssp EETTSBEEEECEETTTTSSEEEEEETTEECTTC------------CSSEEEETTCC-GGGCEEEEEEEECTTCCEECCCE
T ss_pred EeCCCcEEEEeeecCCCCCEEEEEECCEECCCC------------CCCEEEEccCC-hhhCeEeEEEEEcCCCCceeeEE
Confidence 358999999999999899999999999988632 25789999999 999999999999987755 3357
Q ss_pred EEEEEecC--------------CCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEE
Q psy14886 80 QLRVLTLK--------------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL 145 (505)
Q Consensus 80 ~l~v~~~~--------------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~ 145 (505)
.|.|...+ |.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.
T Consensus 97 ~l~V~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~------~~~L~ 168 (218)
T 3k0w_A 97 QLDVCDIPESFQRSVDGVSESKLQICVEP--TSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------KKLYM 168 (218)
T ss_dssp EEEEECCCGGGCTTCCSBCCSSCEEEECC--CCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCC------SSEEE
T ss_pred EEEEEccCcccccccccccCCCceEEECC--CceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCC------CCEEE
Confidence 78887533 2222222 44678899999999999999999999999999886542 34699
Q ss_pred EcCCCCCCCEEEEEEEEcCCCcee-eeEEEEEEe
Q psy14886 146 ISPVSRDDSGIYSCTATNVHGMDE-SKGRLIVLH 178 (505)
Q Consensus 146 i~~v~~~d~G~y~C~~~~~~g~~~-~~~~l~v~~ 178 (505)
|.++..+|+|.|+|.|.|..|... ..+.|.|..
T Consensus 169 i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 169 VPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred EeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 999999999999999999888744 446777754
No 130
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.88 E-value=2.9e-21 Score=162.80 Aligned_cols=182 Identities=29% Similarity=0.402 Sum_probs=141.2
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecC-CCcEEEeeCC-CEEEcCCCCCCCEEEEEEEEcC
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-GGRRKIFENG-NLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~-~~~~~~~~~~-~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..+..+..++ .|.|.+++..|+|.|+|.+.+.
T Consensus 7 ~P~i~~~~--~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 84 (192)
T 2iep_A 7 APVITTPL--ETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNG 84 (192)
T ss_dssp EEEESSCC--CEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECS
T ss_pred CceeecCc--cceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcC
Confidence 34444443 456789999999999999888889999999998864 4455554443 5999999999999999999998
Q ss_pred CCce-eeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeE
Q psy14886 165 HGMD-ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243 (505)
Q Consensus 165 ~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (505)
.|.. ...+.+.|..+|.+.. .+....+..|+.+.|.|.+.+.+.+ .+.|++++..+.... .......+.|
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~------~~~~~~~~~L 155 (192)
T 2iep_A 85 VGGAVESCGALQVKMKPKITR-PPINVKIIEGLKAVLPCTTMGNPKP--SVSWIKGDSALRENS------RIAVLESGSL 155 (192)
T ss_dssp SSCCEEEEEEEEEEEEEEEEE-CCCCEEEETTSCEEECCEEEEESCC--EEEEEETTEECCCCS------SEEECTTSCE
T ss_pred CCceeEeEEEEEEEeCCcccc-CCcceEEeCCCcEEEEEEEeccCCc--eEEEEeCCEEccCCC------cEEEecCCcE
Confidence 8774 4457788877666554 3456778899999999999998765 577999998876532 2223345689
Q ss_pred EEecCCCCCCEEEEEEEEecCCcE-EEEEEEEEcCCC
Q psy14886 244 EITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 279 (505)
Q Consensus 244 ~i~~~~~~~~g~y~C~~~n~~g~~-~~~~~l~v~~~p 279 (505)
.|..+..+|.|.|+|.|.|..|.. +..+.|.|..+|
T Consensus 156 ~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 156 RIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 999999999999999999999987 446788887654
No 131
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.88 E-value=3.1e-21 Score=163.60 Aligned_cols=179 Identities=15% Similarity=0.193 Sum_probs=133.5
Q ss_pred cCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCc
Q psy14886 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355 (505)
Q Consensus 276 ~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 355 (505)
...| +|.++.+...+.+++.|+|.++. +..+.+|.|+|+..+...+...... . .....+.+. +|.|++
T Consensus 21 ~~~P-~P~~l~~~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~~~~~~-~-------~~~~~~~i~-~L~p~t 88 (203)
T 2gee_A 21 MEVP-QPTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFV-D-------SSVGYYTVT-GLEPGI 88 (203)
T ss_dssp SCCC-CCEEEEEECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCCEEEEE-E-------TTCCEEEEC-SCCTTC
T ss_pred ccCc-CCCccEEEecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCceeEEc-C-------CCccEEEeC-CCCCCC
Confidence 3456 77889998899999999999886 3568999999998765433221110 0 122344444 499999
Q ss_pred eeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCC-CCc
Q psy14886 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEF 434 (505)
Q Consensus 356 ~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~-~~~ 434 (505)
.|.|+|.|.|..|.+.++ .+.+....| +|.++.+...+.+++.|.|++++ ++.+.+|.|+|+..+. ..+
T Consensus 89 ~Y~~~V~a~~~~g~s~~~----~~~t~~~~p--~P~~l~~~~~~~~sv~l~W~~p~----~~~i~~Y~v~~~~~~~~~~~ 158 (203)
T 2gee_A 89 DYDISVYTVKNGGESTPT----TLTQQTAVP--PPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEEDV 158 (203)
T ss_dssp EEEEEEEEESSSCBCCCE----EEEEECCCC--CCEEEEEEEEETTEEEEEEECCS----SCCCSEEEEEEEETTCGGGC
T ss_pred EEEEEEEEEeCCCccccE----eeeecCCCc--CCCceEEEEcCCCEEEEEEcCCC----CCCccEEEEEEEECCCCCcc
Confidence 999999999998887644 233433433 79999998888999999999842 4589999999999653 334
Q ss_pred EEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceE
Q psy14886 435 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480 (505)
Q Consensus 435 ~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~ 480 (505)
....... ..+.+.|.+|.|++.|.|+|.|+|..|.|+++...
T Consensus 159 ~~~~~~~----~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~ 200 (203)
T 2gee_A 159 AELSISP----SDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR 200 (203)
T ss_dssp EEEEECT----TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEE
T ss_pred EEEEcCC----CcCEEEECCCCCCCEEEEEEEEecCCCcCCCeeeE
Confidence 4333222 34678999999999999999999999999877544
No 132
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.88 E-value=8.9e-22 Score=166.87 Aligned_cols=156 Identities=19% Similarity=0.293 Sum_probs=119.6
Q ss_pred CCCCCceEEEEEEeccCCCe-EEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 1 MDNQADLTWTCEAFGVPDVT-YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~-~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
|.+|++++|.|.+.+.|.+. +.|+|++..+... .++|.|.+++ .+|+|.|+|.+.|. .....+
T Consensus 19 v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~-------------~~~L~i~~v~-~~D~G~Y~C~a~n~--~~s~~~ 82 (204)
T 3sgj_C 19 VLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ-------------ASSYFIDAAT-VDDSGEYRCQTQLS--TLSDPV 82 (204)
T ss_dssp EETTCCEEEEEECCSSSSCCCEEEEETTEEESCC-------------SSEEEESSCC-GGGCEEEEEEETTS--BCCCCE
T ss_pred EECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC-------------ccEEEEeccc-ccCCEEEEEEeCCC--cccccE
Confidence 46899999999999877654 9999999988731 2799999999 99999999999873 344467
Q ss_pred EEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEE
Q psy14886 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 158 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 158 (505)
.|.|.. +|.+...+ ...+.+|++++|.|.+.+. |.+.+.|+++|..+.. ...++.|.|.++..+|+|.|+
T Consensus 83 ~l~V~~-~p~~~~~~---~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~-----~~~~~~L~i~~v~~~D~G~Y~ 153 (204)
T 3sgj_C 83 QLEVHI-GWLLLQAP---RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY-----FHHNSDFYIPKATLKDSGSYF 153 (204)
T ss_dssp EEEEEC-SSEEEECS---CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEE-----EEECCCEEESSCCGGGCEEEE
T ss_pred EEEEec-CceEecCC---ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeec-----ccCCceEEECcCCcccCEEEE
Confidence 777774 44333332 2568899999999999655 5679999999987642 224678999999999999999
Q ss_pred EEEEcCC-CceeeeEEEEEEeCCe
Q psy14886 159 CTATNVH-GMDESKGRLIVLHGPS 181 (505)
Q Consensus 159 C~~~~~~-g~~~~~~~l~v~~~p~ 181 (505)
|.|.|.. +..+..+.|.|..+|.
T Consensus 154 C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 154 CRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp EEEEETTEEEECCCEEEEEEC---
T ss_pred EEEEeCCCceecCcEEEEEeCcCC
Confidence 9999954 4445557788866543
No 133
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.87 E-value=4.4e-21 Score=162.38 Aligned_cols=182 Identities=21% Similarity=0.347 Sum_probs=144.3
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEc
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 163 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~ 163 (505)
+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..+..++ +|.|.++..+|+|.|+|.+.+
T Consensus 7 ~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 7 APGIRKEM--KDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp EEEEEECC--CCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCcccccC--CceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 44444443 4567899999999999988888999999999999877777776665 699999999999999999999
Q ss_pred CCCceeeeEEEEEEeCCeeeee--CCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeec--
Q psy14886 164 VHGMDESKGRLIVLHGPSYYEQ--LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID-- 239 (505)
Q Consensus 164 ~~g~~~~~~~l~v~~~p~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-- 239 (505)
..+.....+.+.|...|..... ......+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ......
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~~-----~~~~~~~~ 157 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVP--AMTWFHGQKLLQNSEN-----ITIENTEH 157 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCC--EEEEEETTEECCCCSS-----EEEEECSS
T ss_pred CCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCC--eeEEeECCEECCCCCc-----eEEEEcCC
Confidence 9998888888888776665432 2244567889999999999998776 5679999988865321 111111
Q ss_pred CCeEEEecCCC-CCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 240 GGLLEITNASF-ADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 240 ~~~l~i~~~~~-~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
...|.|..+.. +|.|.|+|.|.|..|.....+.|.|.+
T Consensus 158 ~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 158 YTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 25788999884 899999999999999999998888864
No 134
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.87 E-value=1.8e-20 Score=182.34 Aligned_cols=252 Identities=13% Similarity=0.199 Sum_probs=157.4
Q ss_pred CCceEEEEEEecc-CCC-eEEEEECCEECcCCCCC--CCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 4 QADLTWTCEAFGV-PDV-TYSWFRNGELLNSETLP--LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 4 G~~~~l~C~~~~~-p~~-~~~W~~~~~~l~~~~~~--~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
|+.++|.|.+.+. |.+ .|+|++++......... ....+.+.. .+.|.|.... .+ .|.|+|.|.|..+......
T Consensus 150 ~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~-~s~L~i~~~~-~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 150 NSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMT-SSQLSTPLQQ-WR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred CCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEE-EEEEEEcHHH-cC-CceEEEEEEeCCCCceEEE
Confidence 5789999999885 654 89999976432110000 011223332 3568898888 76 9999999999887654433
Q ss_pred -----------EEEEEecCCC----------------------------------------------------ccCCCCC
Q psy14886 80 -----------QLRVLTLKPS----------------------------------------------------FKKRPLE 96 (505)
Q Consensus 80 -----------~l~v~~~~p~----------------------------------------------------~~~~~~~ 96 (505)
.+.+.. +|. +.+.+ +
T Consensus 227 ~~~~~~~~~~~~v~l~~-pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~-p 304 (512)
T 1zvo_C 227 FRWPESPKAQASSVPTA-QPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLT-P 304 (512)
T ss_pred ecCCCCCCcCCEEEEeC-CCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEEC-C
Confidence 233331 221 11111 1
Q ss_pred ceEEeeCCCeEEEEeecCCC-C-CCeEEEEECCEEecCCC---cEEEeeCC------CEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAA-P-KPKFVWKKDGNIIGSGG---RRKIFENG------NLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~-p-~~~i~W~~~g~~~~~~~---~~~~~~~~------~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
....+.+|+.++|.|.+.|. | ...|.|+++|..+.... ......++ .|.|..+..+|.|.|+|.|.|..
T Consensus 305 ~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~ 384 (512)
T 1zvo_C 305 AVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPS 384 (512)
T ss_pred ChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCC
Confidence 11224579999999999886 4 24999999998765211 11111222 48898888999999999999987
Q ss_pred CceeeeEEEEE-E-----eCCeeeeeCCCceEEEeeccEE-EEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeee
Q psy14886 166 GMDESKGRLIV-L-----HGPSYYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238 (505)
Q Consensus 166 g~~~~~~~l~v-~-----~~p~~~~~~~~~~~~~~g~~~~-l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 238 (505)
+... ...+.. . .+|.+....+.. .|+.+. |.|.+.+.+++.+.+.|.++|..+........ ......
T Consensus 385 ~~~~-~~~~~~~~~~~~~~~p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~-~~~~~~ 458 (512)
T 1zvo_C 385 LPPQ-RLMALREPAAQAPVKLSLNLLASSD----PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPA-RPPPQP 458 (512)
T ss_pred CCCC-ceeEEeecCCCCCCCCEEEEEccCc----CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCcccccc-ceeECC
Confidence 6543 222221 1 234433332222 688899 99999998777788999999998865321100 000011
Q ss_pred c------CCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 239 D------GGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 239 ~------~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
+ .+.|.+.....++.|.|+|.|.|....
T Consensus 459 dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~ 492 (512)
T 1zvo_C 459 GSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSR 492 (512)
T ss_pred CCCEEEEEEEEEECchhcCCCCeEEEEEEecCCC
Confidence 1 134566666667799999999997655
No 135
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.87 E-value=9.3e-21 Score=162.50 Aligned_cols=194 Identities=16% Similarity=0.164 Sum_probs=138.8
Q ss_pred CCCCCCCceEEEEE-eCCeEEEEeecCCCCCCCCceEEEEEEeCCCC------CeEEeeeccccceeeeecCceeeEEee
Q psy14886 277 GPPGLPGGVQVVEV-HKTSATIQWTDGATNGRPITHYKIIARTNWNS------TWFNVSEHVIGKEVDRYTGRKEASIEN 349 (505)
Q Consensus 277 ~~p~~p~~~~~~~~-~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~------~w~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (505)
.+|.+|.++.+... ..+.+.++|+++.+.+.+ ..|.|+|+..... .|..+.... ......+...
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~~-~~Y~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 73 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHLP-TSFILKSFRSRADCQYQGDTIPDCVAKK--------RQNNCSIPRK 73 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEECCGGGCSCCCEEEEEECCT--------TCCEEEEEGG
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCCCCCc-eeEEEEEEecCCcccccccccccCCCCC--------CCcEEEECCc
Confidence 47888998988777 578999999998776554 5699999865421 122221100 0122333334
Q ss_pred eccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeecc------ccccEEEEEEeCCccccCCCCceEE
Q psy14886 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG------KIGDLSISWEPLPREKQNAPNIYYK 423 (505)
Q Consensus 350 ~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~------~~~~v~l~W~~~~~~~~~~~i~~Y~ 423 (505)
+|.+++.|.|+|.|.|..|.+. +... .+.+....++.||.++.+... ..+++.|+|++|. ..+..+++|.
T Consensus 74 ~L~~~~~Y~~~V~A~N~~G~~~-s~~~-~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~--~~~~~~l~Y~ 149 (215)
T 1cd9_B 74 NLLLYQYMAIWVQAENMLGSSE-SPKL-CLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWK--PSEYMEQECE 149 (215)
T ss_dssp GCCTTSCEEEEEEEEETTEEEE-CCCE-EECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCG--GGTTSCEEEE
T ss_pred ccccceEEEEEEEEECCCCCcc-CccE-EEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCC--CCCeEEEEEE
Confidence 5999999999999999999874 3222 445555567889999998765 6789999999843 3344458999
Q ss_pred EEEE-EcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCC---CCCceEEEeecc
Q psy14886 424 IFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG---PESEVVTIWHDP 486 (505)
Q Consensus 424 v~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g---~~s~~~~~~t~p 486 (505)
|+|+ ..+...|....... . ....+.|.+|.|++.|.|+|+|.|..|.| ++|+.+.+.|..
T Consensus 150 v~y~~~~~~~~w~~~~~~~-~--~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 150 LRYQPQLKGANWTLVFHLP-S--SKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp EEEEESSTTCCCEEEEEEE-S--CEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred EEEccCCCCCCcEEEeccc-C--cceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 9999 67777887643222 1 34678999999999999999999998775 567777777754
No 136
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.87 E-value=1.2e-20 Score=157.83 Aligned_cols=181 Identities=10% Similarity=0.138 Sum_probs=130.8
Q ss_pred cCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCc
Q psy14886 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355 (505)
Q Consensus 276 ~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 355 (505)
..+|.+|.++.+.....+++.|+|.++. +.+.+|.|+|+.. ...+...... .....+.+.+ |.|++
T Consensus 4 ~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~-~~~~~~~~~~---------~~~~~~~i~~-L~p~t 69 (186)
T 1qr4_A 4 GTDLDNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSP-SGKKNEMEIP---------VDSTSFILRG-LDAGT 69 (186)
T ss_dssp ----CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECT-TCCEEEEEEC---------TTCSEEEEES-CCSSC
T ss_pred cCCCcCCCceEEEecCCCEEEEEEeCCC---CCccEEEEEEEeC-CCCeeEEECC---------CCCCEEEECC-CCCCC
Confidence 4568899999999999999999999873 3688999999854 3333332211 1223445554 99999
Q ss_pred eeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcE
Q psy14886 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 435 (505)
Q Consensus 356 ~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~ 435 (505)
.|.|+|.|.|..|.+.+... .+.+ ++.+|.++.+...+.+++.|.|+++ .+.+.+|.|+|+..+...+.
T Consensus 70 ~Y~~~V~a~~~~~~s~~~~~--~~~t----~p~~P~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~~~~ 138 (186)
T 1qr4_A 70 EYTISLVAEKGRHKSKPTTI--KGST----VVGSPKGISFSDITENSATVSWTPP-----RSRVDSYRVSYVPITGGTPN 138 (186)
T ss_dssp EEEEEEEEESSSCBCCCEEE--EEEC----CCCCCSCEEEESCCSSCEEEEECCC-----SSCCSEEEEEEEETTCCCCE
T ss_pred EEEEEEEEEcCCccCCCEEE--EEEC----CCCCCCccEEEEeCCCEEEEEEECC-----CCcccEEEEEEEeCCCCCce
Confidence 99999999998766653221 2333 3567889999888899999999983 25699999999998765555
Q ss_pred EEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 436 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 436 ~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
...+.. ....+.|.+|.|++.|.|+|.|.|..|.|++.. ..+.|.|
T Consensus 139 ~~~~~~----~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~-~~~~T~p 184 (186)
T 1qr4_A 139 VVTVDG----SKTRTKLVKLVPGVDYNVNIISVKGFEESEPIS-GILKTAL 184 (186)
T ss_dssp EEEEET----TCCEEEECSCCSSCEEEEEEEEEETTEECCCEE-EEEEC--
T ss_pred EEEcCC----CcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEE-EEEEecC
Confidence 444433 336788999999999999999999999988643 3445544
No 137
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.87 E-value=3.4e-21 Score=164.98 Aligned_cols=189 Identities=24% Similarity=0.412 Sum_probs=136.0
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEee----CCCEEEcCC-CCCCCEEEEEEE
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----NGNLLISPV-SRDDSGIYSCTA 161 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~----~~~l~i~~v-~~~d~G~y~C~~ 161 (505)
+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.......... ...|.|.++ ..+|+|.|+|.+
T Consensus 6 ~P~~~~~p--~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 6 PPRFTRTP--VDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp EEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCeEEeCc--ceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 45555544 34678899999999999998999999999999887544333221 235999999 499999999999
Q ss_pred EcCCCceeeeEEEEEEeCC------eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCe
Q psy14886 162 TNVHGMDESKGRLIVLHGP------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235 (505)
Q Consensus 162 ~~~~g~~~~~~~l~v~~~p------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 235 (505)
.|..|.....+.|.|...+ +.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+............
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~v~W~~~g~~l~~~~~~~~~~~~ 161 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDP--EITWFKDFLPVDTSNNNGRIKQL 161 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCC--EEEEEETTEEC------CCEEEE
T ss_pred EcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCC--eEEEEECCccccCcCCCceEEEE
Confidence 9999988888888887642 223333455677889999999999988765 57799999888653110000000
Q ss_pred eeecCCeEEEecCCCCCCEEEEEEEEecCCcEE-EEEEEEEcCCC
Q psy14886 236 INIDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPP 279 (505)
Q Consensus 236 ~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~-~~~~l~v~~~p 279 (505)
.......|.|..+..+|.|.|+|.|.|..|... ..+.|.+...+
T Consensus 162 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 162 RSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp EETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 111236899999999999999999999999864 44666666544
No 138
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.87 E-value=5.2e-21 Score=161.53 Aligned_cols=181 Identities=25% Similarity=0.384 Sum_probs=138.4
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCC--cEEE-eeCC--CEEEcCCCCCCCEEEEEEE
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKI-FENG--NLLISPVSRDDSGIYSCTA 161 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~--~~~~-~~~~--~l~i~~v~~~d~G~y~C~~ 161 (505)
+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|+++|..+.... +... ..++ .|.|.+++..|+|.|+|.+
T Consensus 5 ~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 5 APTFTQPL--QSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp EEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCeEEccC--CceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 34444443 44678999999999999998889999999998876542 2222 2233 6999999999999999999
Q ss_pred EcCCCceeeeEEEEEEe--CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeec
Q psy14886 162 TNVHGMDESKGRLIVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239 (505)
Q Consensus 162 ~~~~g~~~~~~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 239 (505)
.+..|.....+.+.|.. .|+.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ......
T Consensus 83 ~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~~-----~~~~~~ 155 (194)
T 2a38_A 83 TNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTP--VVKFYRDGAEIQSSLD-----FQISQE 155 (194)
T ss_dssp EETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCC--EEEEEETTEECCCSSS-----EEEEEE
T ss_pred EcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCC--eEEEEECCEECCCCCc-----EEEEEc
Confidence 99988888778888874 23333344556778899999999999988766 4679999988865321 112222
Q ss_pred C--CeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 240 G--GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 240 ~--~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
+ ..|.|..+..+|.|.|+|.|.|..|.....+.|.|+
T Consensus 156 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 156 GDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 2 278999999999999999999999998888888763
No 139
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.87 E-value=8.1e-21 Score=161.08 Aligned_cols=168 Identities=20% Similarity=0.323 Sum_probs=127.8
Q ss_pred ceEEeeCCCeEEEEeecCC-CCCCeEEEEECCEEecCCCcEEEeeCC-----CEEEcCCCCCCCEEEEEEEEcCCCceee
Q psy14886 97 SETYAGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIFENG-----NLLISPVSRDDSGIYSCTATNVHGMDES 170 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~-~p~~~i~W~~~g~~~~~~~~~~~~~~~-----~l~i~~v~~~d~G~y~C~~~~~~g~~~~ 170 (505)
....+.+|+.+.|.|.+.+ .|.+.+.|++||..+..+.++.+..+. +|.|.++..+|+|.|+|.|.| |....
T Consensus 10 ~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~ 87 (207)
T 3rbs_A 10 LAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATN 87 (207)
T ss_dssp EEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEE
T ss_pred CceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEE
Confidence 3567899999999999865 689999999999999877666655433 499999999999999999999 54444
Q ss_pred eEEEEEE---------------------eCCeeeeeCCCceEEEeeccEEEEEEeeec-CCCCeEEEEEeCCEEecCCCC
Q psy14886 171 KGRLIVL---------------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDL 228 (505)
Q Consensus 171 ~~~l~v~---------------------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~~w~~~~~~~~~~~~ 228 (505)
...+.+. .+|.+.... ...+..|+.+.|.|.+.+. |.| .+.|++++..+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~--~~~v~~g~~v~l~C~v~g~~P~p--~i~W~k~g~~l~~~~~ 163 (207)
T 3rbs_A 88 HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL--SWEVTGECNVLLKCKVANIKKET--HIVWYKDEREISVDEK 163 (207)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE--EEEEETTTEEEEEEEEESCCTTC--EEEEEETTEEECCCCC
T ss_pred EEEEEEEccchhhhcccccccccccccCCCCceEecC--CcEEcCCCcEEEEEEEeCCCCCC--EEEEEECCEECCCCCc
Confidence 4443321 134433322 3667889999999999987 655 5679999999865321
Q ss_pred CcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 229 ~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
. ........|.|.++..+|.|.|+|.|.|..|.....+.|+.
T Consensus 164 ~-----~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 164 H-----DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp C-----CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred e-----EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 1 11112246999999999999999999999999988888764
No 140
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.87 E-value=6.2e-19 Score=177.12 Aligned_cols=332 Identities=11% Similarity=0.100 Sum_probs=191.6
Q ss_pred CCEEEcCCCCCCCEEEEEEEEcCCCce-e--eeEEEEEEeCCeeeeeCCCceEEE----eec---cEEEEEEeee---cC
Q psy14886 142 GNLLISPVSRDDSGIYSCTATNVHGMD-E--SKGRLIVLHGPSYYEQLPPKITIA----AHR---NLQLRCSAHT---EE 208 (505)
Q Consensus 142 ~~l~i~~v~~~d~G~y~C~~~~~~g~~-~--~~~~l~v~~~p~~~~~~~~~~~~~----~g~---~~~l~C~~~~---~~ 208 (505)
..+.|.++.......|++.|.|..|.. . ....+.....+... ..+..+.+. ... .+.|.|.... .+
T Consensus 223 ~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp-~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~ 301 (680)
T 1zlg_A 223 ERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAP-PAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIP 301 (680)
T ss_pred CeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCC-CCCCceEeeeeeecCCCceEEEEEecCCCCCCCc
Confidence 357788888878788888888887722 1 12222221111111 122233322 234 6788887432 11
Q ss_pred CCCeEEEEEeC--CEE-ecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEE---EEEEEE---cCCC
Q psy14886 209 LLDVAYIWTHN--GVR-IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST---KTTVIV---EGPP 279 (505)
Q Consensus 209 ~~~~~~~w~~~--~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~---~~~l~v---~~~p 279 (505)
...+.+.|... +.. .....+ ...........+.+..+.....+.|+..|.|..|.... ...+.+ ..+|
T Consensus 302 i~~Y~V~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P 378 (680)
T 1zlg_A 302 VHHYKVFWSWMVSSKSLVPTKKK---RRKTTDGFQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATN 378 (680)
T ss_pred eeEEEEEEEecccccccCCccce---EEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCC
Confidence 22344555521 110 000000 00011112256788888888889999999998876432 122333 2344
Q ss_pred CCCCceEEEEEeCCeEEE-----------EeecCCCCCCCCceEEEEEEeCCCCC-------eEEeeeccc----cceee
Q psy14886 280 GLPGGVQVVEVHKTSATI-----------QWTDGATNGRPITHYKIIARTNWNST-------WFNVSEHVI----GKEVD 337 (505)
Q Consensus 280 ~~p~~~~~~~~~~~~v~l-----------~w~~~~~~~~~i~~y~v~~~~~~~~~-------w~~~~~~~~----~~~~~ 337 (505)
. |.++.+.....+++.| +|.+|... ..+..|.|.|....... |........ .....
T Consensus 379 ~-p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~-~~~~~y~v~w~~~~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~ 456 (680)
T 1zlg_A 379 N-KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQ-DGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNRTTGSEASS 456 (680)
T ss_pred C-ccccccccccCccccccccccCCCccccccCCccc-CCcceEEEEEeCCCCCccceEEEEEeeeecccCCCCcceeee
Confidence 4 5667777777778776 99988643 34668999887654321 211100000 00000
Q ss_pred eecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccC-----------------CCCCC-----CCCCce---
Q psy14886 338 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT-----------------PADKP-----YQAPSR--- 392 (505)
Q Consensus 338 ~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t-----------------~~~~p-----~~~P~~--- 392 (505)
.......+.+. +|.+++.|.|+|.|.|..|.+..... .+.+ ....| +++|.+
T Consensus 457 ~~~~~~~~~l~-~L~p~t~Y~~~V~A~n~~G~s~~~~~--~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~ 533 (680)
T 1zlg_A 457 GMTHENYIILQ-DLSFSCKYKVTVQPIRPKSHSKAEAV--FFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSA 533 (680)
T ss_pred eeccCceEEec-CCCCCCeEEEEEEEecCCCCCCcccc--ceeCCCccccccCCccccccCCCCccccccccCCccccce
Confidence 11122344444 59999999999999999996542111 0111 01112 267888
Q ss_pred -eeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCC----cEEEEeee--cCceeeEEEEcCCccceeeEEEEE
Q psy14886 393 -IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE----FQSETLKE--YGNVGIAVVRIPSEFYYTEYEVKV 465 (505)
Q Consensus 393 -~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~----~~~~~~~~--~~~~~~~~~~l~~L~p~~~Y~~~v 465 (505)
+.+...+.+ |.|+|++| ..+.+|.|++|+|+|+..+... +....+.. ......+.+.|.+|.|++.|.|+|
T Consensus 534 ~v~v~~~~~t-i~lsW~pP-~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V 611 (680)
T 1zlg_A 534 SFIVQDVNIT-GHFSWKMA-KANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEV 611 (680)
T ss_pred eEEEeccCce-EEEEecCC-CCCCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEE
Confidence 666656566 99999984 3355899999999999764322 11111110 011235788999999999999999
Q ss_pred EEecCCCCCCCCceEEEeec
Q psy14886 466 QAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 466 ~a~n~~G~g~~s~~~~~~t~ 485 (505)
+|+|.+|.|++ ....+.|.
T Consensus 612 ~A~n~~G~G~~-~~~~~~T~ 630 (680)
T 1zlg_A 612 QVLTPGGEGPA-TIKTFRTP 630 (680)
T ss_pred EEEcCCCcCCC-cceEEECC
Confidence 99999999998 77777775
No 141
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.87 E-value=3.9e-22 Score=170.68 Aligned_cols=172 Identities=20% Similarity=0.370 Sum_probs=129.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcC-----CCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCc-
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNS-----ETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT- 74 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~-----~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~- 74 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+.. .........++.....+|.|.+++ .+|+|.|+|.+.+..+.
T Consensus 16 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~-~~d~G~Y~C~~~~~~g~~ 94 (209)
T 1nbq_A 16 IPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVT-REDTGTYTCMVSEEGGNS 94 (209)
T ss_dssp EETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCC-TTSCSEEEEEEEETTSSC
T ss_pred EEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCC-HHHCcEEEEEEecCCCCc
Confidence 35899999999999989999999998754210 000112346777777999999999 99999999999987653
Q ss_pred -eEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEecCCCc---------EEEe-eCC
Q psy14886 75 -RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGR---------RKIF-ENG 142 (505)
Q Consensus 75 -~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~~~~~---------~~~~-~~~ 142 (505)
....+.|.|.. +|.+..... ...+.+|+.+.|.|.+ .+.|.+.+.|++++..+..... +... ..+
T Consensus 95 ~~~~~~~l~V~~-~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (209)
T 1nbq_A 95 YGEVKVKLIVLV-PPSKPTVNI--PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTG 171 (209)
T ss_dssp EECCEEECCEEB-CCCCCCCCC--BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTC
T ss_pred cceEEEEEEEec-CCcCCCccc--ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcc
Confidence 33456677774 565544442 2458899999999997 8889999999999988765322 1111 345
Q ss_pred CEEEcCCCCCCCEEEEEEEEcCCCcee--eeEEEEE
Q psy14886 143 NLLISPVSRDDSGIYSCTATNVHGMDE--SKGRLIV 176 (505)
Q Consensus 143 ~l~i~~v~~~d~G~y~C~~~~~~g~~~--~~~~l~v 176 (505)
.|.|.++..+|.|.|+|.|.|..|... ..+.|.|
T Consensus 172 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 172 ELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred eEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 799999999999999999999999883 3355554
No 142
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.87 E-value=1.9e-21 Score=177.74 Aligned_cols=168 Identities=19% Similarity=0.274 Sum_probs=133.2
Q ss_pred CCCCceEEEEEE------eccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEE-cccCc
Q psy14886 2 DNQADLTWTCEA------FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAK-NQLKT 74 (505)
Q Consensus 2 ~~G~~~~l~C~~------~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~-~~~~~ 74 (505)
.+|++++|.|.+ .+.|.+.++|+|++.++.. ...++...++.|.|.+++ .+|+|.|+|.+. |..|.
T Consensus 116 ~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~------~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~~n~~g~ 188 (315)
T 1itb_B 116 PVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLL------DNIHFSGVKDRLIVMNVA-EKHRGNYTCHASYTYLGK 188 (315)
T ss_dssp ETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCC------CSSSEEEETTEEEESSCC-GGGCEEEEEEEEEEETTE
T ss_pred ecCCCeEEEEecccccccCCCCCCEEEEEECCEECCC------ccceEeecCceEEEEece-ehhCcEEEEEEEcCCCCc
Confidence 479999999998 7888999999999999864 344667778899999999 999999999999 67776
Q ss_pred eEe---eEEEEEE----ecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEE-----e---
Q psy14886 75 RYS---SAQLRVL----TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-----F--- 139 (505)
Q Consensus 75 ~~~---~~~l~v~----~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~-----~--- 139 (505)
... .+.+.+. ..+|.+...+ .....+.+|+.+.|.|.+.|.|.+.+.|+++|..+........ .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~ 267 (315)
T 1itb_B 189 QYPITRVIEFITLEENKPTRPVIVSPA-NETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP 267 (315)
T ss_dssp EEEEEEEEEEEEECCCCCCCCEECSCC-SEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCS
T ss_pred EEEEEEEEEEEEecCCCCCCCEEecCC-CCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeecc
Confidence 532 3334344 1355554433 2335789999999999999999999999999999876442111 1
Q ss_pred -------eCCCEEEcCCCCCC-CEEEEEEEEcCCCceeeeEEEEEE
Q psy14886 140 -------ENGNLLISPVSRDD-SGIYSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 140 -------~~~~l~i~~v~~~d-~G~y~C~~~~~~g~~~~~~~l~v~ 177 (505)
....|.|.++..+| +|.|+|.|.|..|.....+.|.|.
T Consensus 268 ~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 268 ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp SCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 12269999999999 999999999999999988888763
No 143
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.87 E-value=4.1e-21 Score=158.94 Aligned_cols=152 Identities=18% Similarity=0.247 Sum_probs=117.2
Q ss_pred CCCCCceEEEEEEeccCCCe-EEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 1 MDNQADLTWTCEAFGVPDVT-YSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~-~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
|.+|++++|.|.+.+.|.+. +.|+|++..+.. .+++|.|.+++ .+|+|.|+|.+.|..+ ...+
T Consensus 19 v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-------------~~~~L~i~~~~-~~d~G~Y~C~~~n~~~--s~~~ 82 (175)
T 1fnl_A 19 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-------------QASSYFIDAAT-VNDSGEYRCQTNLSTL--SDPV 82 (175)
T ss_dssp EETTCCEEEEEECCCBTTBCCCEEEETTEEEES-------------SCSEEEESSCC-GGGCEEEEEECSSSCC--CCCE
T ss_pred eeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-------------CceEEEEeCCC-cccCEEEEEEeeCCcc--cccE
Confidence 46899999999998877655 899999988762 25689999999 9999999999987443 3456
Q ss_pred EEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCC-CeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEE
Q psy14886 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK-PKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 158 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~-~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 158 (505)
.|.|.. ++.. ... ....+.+|+.+.|.|.+.+.++ +.+.|+++|..+.. ......|.|.++..+|+|.|+
T Consensus 83 ~l~V~~-~~~~-~~~--~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~-----~~~~~~L~i~~v~~~d~G~Y~ 153 (175)
T 1fnl_A 83 QLEVHI-GWLL-LQA--PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY-----FHHNSDFHIPKATLKDSGSYF 153 (175)
T ss_dssp EEEEEC-SSEE-EEC--SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEE-----EEECCCEEESSCCGGGCEEEE
T ss_pred EEEEeC-CCce-eeC--CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccC-----CCCCCEEEEcccChhhCeEEE
Confidence 777763 2322 222 2245889999999999988765 49999999988742 234678999999999999999
Q ss_pred EEEEcCCCce-eeeEEEEEE
Q psy14886 159 CTATNVHGMD-ESKGRLIVL 177 (505)
Q Consensus 159 C~~~~~~g~~-~~~~~l~v~ 177 (505)
|.|.|..+.. +..+.|.|.
T Consensus 154 C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 154 CRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EEEEETTEEEECCCEEEEEE
T ss_pred EEEEcCCCCccCccEEEEEe
Confidence 9999976543 334666664
No 144
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.87 E-value=3.2e-21 Score=177.13 Aligned_cols=167 Identities=15% Similarity=0.222 Sum_probs=130.8
Q ss_pred CCCCCceEEEEEEeccC-CCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcc--cCceEe
Q psy14886 1 MDNQADLTWTCEAFGVP-DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQ--LKTRYS 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~--~~~~~~ 77 (505)
+.+|+.+.|.|.+.+.| .+.+.|+|++..+.. ...++...+++|.|.+++ .+|+|.|+|.|.|. .+....
T Consensus 140 ~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~------~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~n~~~~g~~~~ 212 (329)
T 3oq3_B 140 THDKYGIDLYCGILYAKHYNNITWYKNNQELII------DGTKYSQSGQNLIIHNPE-LEDSGRYDCYVHYDDVRIKNDI 212 (329)
T ss_dssp SSTTTCEEEECCCCSCCCCCEEEEEETTEECCC------SSSSEEEETTEEEECSCC-GGGCEEEEEEEEECCTTSSSCE
T ss_pred EeCCCcEEEEeccCCCCCCceEEEEECCccCCC------CCceEecCCCEEEEeecC-hhhCEEEEEEEEecccCCCcee
Confidence 35799999999999999 899999999998853 345676678999999999 99999999999986 544333
Q ss_pred ----eEEEEEEecCCC--ccCCCCCceEEeeCCCeEEEEeecCCCC---CC-eEEEEECCEEe-cCCCcEEEe-------
Q psy14886 78 ----SAQLRVLTLKPS--FKKRPLESETYAGEGGNVTIFCNPEAAP---KP-KFVWKKDGNII-GSGGRRKIF------- 139 (505)
Q Consensus 78 ----~~~l~v~~~~p~--~~~~~~~~~~~v~~g~~v~l~C~~~~~p---~~-~i~W~~~g~~~-~~~~~~~~~------- 139 (505)
.+.|.|...+.. .... +....+.+|+.+.|.|.+.+.| .+ .+.|+++|..+ ..+.+....
T Consensus 213 ~~s~~~~l~V~~~~~~~~~~~~--~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~ 290 (329)
T 3oq3_B 213 VVSRCKILTVIPSQDHRFKLIL--DPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGI 290 (329)
T ss_dssp EEEEEEEEEEECCCCCCEEEEC--CSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTE
T ss_pred EEEeeEEEEEECCCCCCCceec--CCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCce
Confidence 366777753311 1112 3457789999999999999987 67 89999999874 333322221
Q ss_pred eCCCEEEcCCCCCCCE-EEEEEEEcCCCceeeeEEEEE
Q psy14886 140 ENGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 140 ~~~~l~i~~v~~~d~G-~y~C~~~~~~g~~~~~~~l~v 176 (505)
..+.|.|.++..+|.| .|+|.|.|..|.....+.|.|
T Consensus 291 ~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 291 TEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred eEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 2456999999999999 999999999999888877765
No 145
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.87 E-value=1.3e-20 Score=158.36 Aligned_cols=170 Identities=21% Similarity=0.271 Sum_probs=132.7
Q ss_pred EEeeC-CCeEEEEeecCCCCC--CeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 99 TYAGE-GGNVTIFCNPEAAPK--PKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 99 ~~v~~-g~~v~l~C~~~~~p~--~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
..+.+ |+++.|.|.+.+.|. +.+.|+++|..+....... .+..|.|.++..+|+|.|+|.+.|. +.....+.|.
T Consensus 12 ~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~ 88 (190)
T 2wv3_A 12 VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA--SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIE 88 (190)
T ss_dssp EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC--SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEE
T ss_pred EEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe--ccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEE
Confidence 45666 999999999988876 7999999999887543322 3467999999999999999999999 8888888999
Q ss_pred EEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEe--CCEEecCCCCCcccCCeeeec--CCeEEEecCC-C
Q psy14886 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH--NGVRIGNMDLNELETPNINID--GGLLEITNAS-F 250 (505)
Q Consensus 176 v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~--~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~-~ 250 (505)
|..+|.+... +....+..|+.+.|.|.+.+.|.+ .+.|++ ++..+..... ......... ...|.|..+. .
T Consensus 89 V~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~g~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~ 163 (190)
T 2wv3_A 89 VKAAPDITGH-KRSENKNEGQDAMMYCKSVGYPHP--EWMWRKKENGVFEEISNS--SGRFFIINKENYTELNIVNLQIT 163 (190)
T ss_dssp EECCCEEEEE-CSEEEEETTSCEEEEEEEECSSCC--EEEEEEEETTEEEECCCT--TSCEEEEECSSEEEEEECSCCTT
T ss_pred EecCCccccc-CCcceeeCCCcEEEEEEeCccCCC--ceEEEEcCCCceeeeecC--CCeEEEecCCCeeEEEEEecccc
Confidence 9887776544 456678899999999999888766 567988 7777642110 001111111 1379999999 6
Q ss_pred CCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 251 ADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 251 ~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
+|.|.|+|.|.|..|.....+.|.|.
T Consensus 164 ~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 164 EDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp TSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCCEEEEEEEEecCCcceeEEEEEEE
Confidence 99999999999999999888888774
No 146
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.87 E-value=1.2e-21 Score=167.77 Aligned_cols=171 Identities=16% Similarity=0.158 Sum_probs=120.2
Q ss_pred CCCC--CceEEEEEEeccCCCeEEEEEC---CEECcCCCCCCCCCCcEEE-ECCeEEEEcCCCCCCCeEEEEEEEcccCc
Q psy14886 1 MDNQ--ADLTWTCEAFGVPDVTYSWFRN---GELLNSETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKT 74 (505)
Q Consensus 1 v~~G--~~~~l~C~~~~~p~~~~~W~~~---~~~l~~~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~ 74 (505)
|.+| ++++|.|.+.+ |.+.++|+++ +..+.. ..++.. ....|.|.+++ .+|+|.|+|.|.|..+.
T Consensus 19 v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~-------~~~~~~~~~~~l~I~~v~-~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 19 ITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPD-------GNRISWDSKKGFTIPSYM-ISYAGMVFCEAKINDES 89 (213)
T ss_dssp ECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCC-------SSSCEEETTTEEEEEGGG-TTTCSEEEEEEC----C
T ss_pred EecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccC-------CCcccccCCccEEEccCC-hhcCceEEEEEEECCee
Confidence 4689 99999999976 7789999884 666652 233333 45789999999 99999999999885444
Q ss_pred eEee-EEEEEEec-CCCccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEEECCEEecCCCc-E-E---------Ee
Q psy14886 75 RYSS-AQLRVLTL-KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGGR-R-K---------IF 139 (505)
Q Consensus 75 ~~~~-~~l~v~~~-~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g~~~~~~~~-~-~---------~~ 139 (505)
..+. +.|.|... +|.+...+ ...+.+.+|++++|.|.+.+.| .+.+.|+++|..+..... . . ..
T Consensus 90 ~~s~~~~l~v~~~~~p~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
T 2x1w_L 90 YQSIMYIVVVVGYRIYDVVLSP-SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 168 (213)
T ss_dssp EECCCEEEEECBCCEEEEEEES-CSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEE
T ss_pred EEEEEEEEEEeCCcccceEEcC-CCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcccee
Confidence 4333 56666431 22233333 2334789999999999998754 458999998875432111 0 0 11
Q ss_pred eCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCe
Q psy14886 140 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181 (505)
Q Consensus 140 ~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~ 181 (505)
...+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 169 ~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 169 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred eeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 123599999999999999999999999998889999977654
No 147
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.87 E-value=6.1e-21 Score=161.51 Aligned_cols=181 Identities=22% Similarity=0.241 Sum_probs=140.1
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC-CcEEEee--CC--CEEEcCCCCCCCEEEEEEE
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFE--NG--NLLISPVSRDDSGIYSCTA 161 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~-~~~~~~~--~~--~l~i~~v~~~d~G~y~C~~ 161 (505)
+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+... .++.+.. ++ .|.|.++..+|+|.|+|.+
T Consensus 4 ~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 4 APHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCEEEEcC--CccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 55555544 4567899999999999999999999999999988653 3343322 33 7999999999999999999
Q ss_pred EcCCCceeeeEEEEEEeCCeeeeeC----CCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeee
Q psy14886 162 TNVHGMDESKGRLIVLHGPSYYEQL----PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 237 (505)
Q Consensus 162 ~~~~g~~~~~~~l~v~~~p~~~~~~----~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 237 (505)
.|..|.....+.|.|..+|...... +....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~-----~~~~ 154 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGH-----YQVI 154 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCC--EEEEEESSCEECSSSS-----CEEE
T ss_pred EECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCC--cEEEEECCEEeecCCC-----EEEE
Confidence 9998888888888887765543211 133567789999999999998765 6679999988764321 1111
Q ss_pred --ecCCeEEEec-CCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 238 --IDGGLLEITN-ASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 238 --~~~~~l~i~~-~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
.....|.|.. +..+|.|.|+|.|.|..|..+..+.|.|.
T Consensus 155 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 155 VTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp ECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 1235788888 99999999999999999998888888875
No 148
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.87 E-value=3.8e-22 Score=168.88 Aligned_cols=167 Identities=17% Similarity=0.197 Sum_probs=120.5
Q ss_pred CCCCceEEEEEEeccCCCeEEEEECC-EECcCCCCCCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 2 DNQADLTWTCEAFGVPDVTYSWFRNG-ELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~~~~W~~~~-~~l~~~~~~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
++|++++|.|.+.|.|.+.|.|+++. .++. ++... ..++|.|.+++ .+|+|.|+|.|.|..+.....
T Consensus 14 ~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~---------~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~n~~~~~~~~ 83 (202)
T 1vca_A 14 QIGDSVSLTCSTTGCESPFFSWRTQIDSPLN---------GKVTNEGTTSTLTMNPVS-FGNEHSYLCTATCESRKLEKG 83 (202)
T ss_dssp ETTSCEEEEEEEESCSSCEEEEEETTCCCCS---------SEEEEETTEEEEEESSCC-GGGCSEEEEEEEETTEEEEEE
T ss_pred cCCCcEEEEEeecCCCCCeEEEECCCCCCcc---------ceEEEcCCccEEEECcCC-HHHCEEEEEEEEECCceEeeE
Confidence 48999999999999999999999842 2221 22222 23479999999 999999999999988777777
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC--CeEEEEECCEEecCCCcEE-------EeeCCCEEEcC
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK--PKFVWKKDGNIIGSGGRRK-------IFENGNLLISP 148 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~--~~i~W~~~g~~~~~~~~~~-------~~~~~~l~i~~ 148 (505)
+.|.|...|..+.+.+ . ..+.+|+.++|.|.+.+. |. +++.|++++..+....... ......|.|..
T Consensus 84 ~~l~V~~~p~~~~~~~--~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~ 160 (202)
T 1vca_A 84 IQVEIYSFPKDPEIHL--S-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTP 160 (202)
T ss_dssp EEEEEEBCCSCCEEEE--S-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECC
T ss_pred EEEEEEeCCCCCEeCC--c-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEe
Confidence 8888886433333332 1 447899999999999875 33 3799999998774321000 11122467888
Q ss_pred CCCCCCEEEEEEEEcCCCce-------eeeEEEEEEeCCe
Q psy14886 149 VSRDDSGIYSCTATNVHGMD-------ESKGRLIVLHGPS 181 (505)
Q Consensus 149 v~~~d~G~y~C~~~~~~g~~-------~~~~~l~v~~~p~ 181 (505)
+..+|+|.|+|.|.|..+.. .....|.|.++|.
T Consensus 161 ~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 161 VIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 88889999999999987752 3456777776654
No 149
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.87 E-value=5.2e-21 Score=162.20 Aligned_cols=182 Identities=17% Similarity=0.157 Sum_probs=129.0
Q ss_pred CCCceEEEEEe--CCeEEEEeecCCCCCCCCceEEEEEEeCCC-CCeEEeeeccccceeeeecCceeeEEeeeccCCcee
Q psy14886 281 LPGGVQVVEVH--KTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357 (505)
Q Consensus 281 ~p~~~~~~~~~--~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y 357 (505)
+|.++.+..+. .+++.|+|.+| .+.++.+|.|+|+.... ..|....... ....+.+.+ |.|++.|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~---------~~~~~~i~~-L~p~t~Y 69 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSVGRWKEATIPG---------HLNSYTIKG-LKPGVVY 69 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCSSCCEEEEECT---------TCCEEEECS-CCTTEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCCCceEEEecCC---------CccEEEecC-CCCCCEE
Confidence 46677777766 89999999988 46789999999997654 5566543221 123445555 9999999
Q ss_pred EEEEEEEcCCCcCCCCC---------CCCCccCCCCCCCCCC----ceeeeeccccccEEEEEEeCCccccCCCCceEEE
Q psy14886 358 EFKVIAGNELGYGEPSS---------PSPQYNTPADKPYQAP----SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 424 (505)
Q Consensus 358 ~~~v~a~n~~G~~~~s~---------~~~~~~t~~~~p~~~P----~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v 424 (505)
.|+|.|.|..|.+.++. ......+....|..+| .++.+...+.+++.|.|+++ .+.+.+|+|
T Consensus 70 ~~~V~a~n~~G~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v 144 (201)
T 2ha1_A 70 EGQLISIQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA-----SDTVSGFRV 144 (201)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS-----CTTEEEEEE
T ss_pred EEEEEEEecccccCceeEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC-----CCCccEEEE
Confidence 99999999999886421 1001112222233333 56788778889999999983 357999999
Q ss_pred EEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEE
Q psy14886 425 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482 (505)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~ 482 (505)
+|+..+...|...... .. ....+.|.+|.|++.|.|+|.|+|.+|.|++......
T Consensus 145 ~~~~~~~~~~~~~~~v-~~--~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s~~~~ 199 (201)
T 2ha1_A 145 EYELSEEGDEPQYLDL-PS--TATSVNIPDLLPGRKYIVNVYQISEDGEQSLILSTSQ 199 (201)
T ss_dssp EEEETTTCCCCEEEEE-ET--TCCEEEECSCCTTCEEEEEEEEEETTSCEEEEEEEEE
T ss_pred EEEECCCCCceeEEEc-CC--ceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEeeEee
Confidence 9998754444322222 12 3467899999999999999999999999987655543
No 150
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.87 E-value=4.3e-21 Score=164.57 Aligned_cols=190 Identities=27% Similarity=0.488 Sum_probs=139.5
Q ss_pred EEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCC-----cEEEeeCCCEEE-----cCCCC
Q psy14886 82 RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG-----RRKIFENGNLLI-----SPVSR 151 (505)
Q Consensus 82 ~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~-----~~~~~~~~~l~i-----~~v~~ 151 (505)
.+...+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+.... ......++.+.+ .++..
T Consensus 4 ~~~~~pp~i~~~p--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 81 (212)
T 2v9r_A 4 RQEDFPPRIVEHP--SDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSR 81 (212)
T ss_dssp --CCEEEEEEECC--CCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCC
T ss_pred CcccCCcceecCC--CceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCc
Confidence 3344456665554 45678999999999999888889999999999876432 233334444444 45689
Q ss_pred CCCEEEEEEEEcCCCce-eeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEe-eecCCCCeEEEEEeCCEEecCCCCC
Q psy14886 152 DDSGIYSCTATNVHGMD-ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLN 229 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~~~w~~~~~~~~~~~~~ 229 (505)
.|+|.|+|.+.|..|.. ...+.|.|...++.....+....+..|+.+.|.|.+ .+.|.+ .+.|++++..+....
T Consensus 82 ~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~l~~~~-- 157 (212)
T 2v9r_A 82 PDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEP--TISWKKDGSPLDDKD-- 157 (212)
T ss_dssp CSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCC--EEEEEETTEEECTTS--
T ss_pred ccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCC--EEEEEECCccCCCCc--
Confidence 99999999999988765 345777776655444444556778899999999998 777765 677999999886532
Q ss_pred cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEE-EEEEEEcCCCCC
Q psy14886 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST-KTTVIVEGPPGL 281 (505)
Q Consensus 230 ~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~-~~~l~v~~~p~~ 281 (505)
......++.|.|..+..+|.|.|+|.|.|..|.... .+.|.|..+|..
T Consensus 158 ----~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~ 206 (212)
T 2v9r_A 158 ----ERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSF 206 (212)
T ss_dssp ----TTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred ----ceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchH
Confidence 233345678999999999999999999999998655 488888877754
No 151
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.87 E-value=1.1e-21 Score=166.71 Aligned_cols=168 Identities=24% Similarity=0.400 Sum_probs=128.3
Q ss_pred CCCCCceEEEEE-EeccCC-CeEEEEECCEECcCCCCCCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCE-AFGVPD-VTYSWFRNGELLNSETLPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~-~~~~p~-~~~~W~~~~~~l~~~~~~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
+.+|+.++|.|. +.+.|. +.+.|+|++..+... ...+... .+++|.|.+++ .+|+|.|+|.+.+..+...
T Consensus 20 v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~-----~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 20 VKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFIT-----MDKRRFVSQTNGNLYIANVE-ASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp EETTCCEEECCCCCSEESSCCEEEEEESSTTCBCC-----CSSSEEECTTTCCEEESSCC-GGGCEEEEEEEEEGGGTEE
T ss_pred EECCCCEEEeccccccCCCceEEEEEECCceeeee-----eCCCeEEEcCCCeEEECcCC-cccCeEEEEEEEecCCCcc
Confidence 468999999999 788888 999999998876421 1222222 46789999999 9999999999998665544
Q ss_pred e---eEEEEEEe------cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEc
Q psy14886 77 S---SAQLRVLT------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147 (505)
Q Consensus 77 ~---~~~l~v~~------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~ 147 (505)
. ...+.+.. .+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... .....++.|.|.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~-~~~~~~~~L~i~ 170 (201)
T 3s97_C 94 VFSKFIPLIPIPERTTKPYPADIVVQF--KDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA-EISTSGAVLKIF 170 (201)
T ss_dssp EECCCEEEEEECCSSCCCEEEEEEEEC--CCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTC-EEETTTTEEEEC
T ss_pred hhhcccceeeccccccCCCCCceEecC--CceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCce-eecCCCCEEEEc
Confidence 3 23333331 123333332 25678899999999999999999999999998776442 233345679999
Q ss_pred CCCCCCCEEEEEEEEcCCCceeeeEEEEEE
Q psy14886 148 PVSRDDSGIYSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~ 177 (505)
++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 171 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 171 NIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 999999999999999999998888888774
No 152
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=4.1e-21 Score=160.58 Aligned_cols=160 Identities=21% Similarity=0.362 Sum_probs=121.8
Q ss_pred CCCCCceEEEEEEeccCCC--eEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 1 MDNQADLTWTCEAFGVPDV--TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~--~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
|.+|++++|.|.+.+.|.+ .+.|+|++..+..... . .....|.|. + .+|+|.|+|.+.|. ....
T Consensus 10 v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~-------~-~~~~~l~i~--~-~~d~G~Y~C~~~n~---~~~~ 75 (184)
T 3b5h_A 10 EDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL-------P-GQKTEFKVD--S-DDQWGEYSCVFLPE---PMGT 75 (184)
T ss_dssp EEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTC-------C-CSEEEEEEC--G-GGCCEEEEEEEEST---TSCE
T ss_pred EecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccc-------c-CCcEEEEEe--c-hhhCeEEEEEEECC---cCcE
Confidence 4689999999999886655 9999999998874321 0 012345554 6 88999999999972 2356
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCC-CCeEEEEE---CCE-EecC--CCcEEEeeCC---CEEEcC
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-KPKFVWKK---DGN-IIGS--GGRRKIFENG---NLLISP 148 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p-~~~i~W~~---~g~-~~~~--~~~~~~~~~~---~l~i~~ 148 (505)
+.|.|.. +|.+...+ ....+.+|+.+.|.|.+.+.| .+.+.|++ ++. .+.. ..++.+..++ .|.|.+
T Consensus 76 ~~l~V~~-~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 152 (184)
T 3b5h_A 76 ANIQLHG-PPRVKAVK--SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIEN 152 (184)
T ss_dssp EEEEECC-SCCCEESC--SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECS
T ss_pred EEEEEec-CCceeecC--CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEee
Confidence 6777774 67666554 445789999999999999998 78999999 444 3432 2455554444 699999
Q ss_pred CC-CCCCEEEEEEEEcCCCceeeeEEEEEE
Q psy14886 149 VS-RDDSGIYSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 149 v~-~~d~G~y~C~~~~~~g~~~~~~~l~v~ 177 (505)
+. ..|.|.|+|.|.|..|.....+.|.|.
T Consensus 153 v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 153 LNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp CCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 99 899999999999999998888888774
No 153
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.86 E-value=7.7e-22 Score=169.51 Aligned_cols=171 Identities=22% Similarity=0.316 Sum_probs=127.9
Q ss_pred CCCCCceEEEEEEeccC----CCeEEEEE----------------CCEECcCCCCCCCCCCcEEEE-------CCeEEEE
Q psy14886 1 MDNQADLTWTCEAFGVP----DVTYSWFR----------------NGELLNSETLPLEDQDRYFIQ-------DNVLTIR 53 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p----~~~~~W~~----------------~~~~l~~~~~~~~~~~~~~~~-------~~~L~i~ 53 (505)
+.+|++++|.|.+.+.+ .+.+.|+| ++..+... .....+|+... +.+|.|.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~~~~~~~~~L~i~ 89 (214)
T 3jz7_A 12 KAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNY--YPDLKGRVHFTSNDVKSGDASINVT 89 (214)
T ss_dssp EETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCC--CGGGTTTEEESCSCGGGTBCCEEEC
T ss_pred EecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEcccc--CCccccceEEeccCccCCcccEEEc
Confidence 35899999999998766 46999998 44433210 00124566553 4689999
Q ss_pred cCCCCCCCeEEEEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECC--EEe
Q psy14886 54 YLNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDG--NII 130 (505)
Q Consensus 54 ~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g--~~~ 130 (505)
+++ .+|+|.|+|.+.+..+.....+.|.|.. +|.+...+ ....+.+|+.+.|.|.+ .+.|.+.+.|++++ ..+
T Consensus 90 ~v~-~~D~G~Y~C~~~~~~~~~~~~~~l~V~~-~p~~~~~~--~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~ 165 (214)
T 3jz7_A 90 NLQ-LSDIGTYQCKVKKAPGVANKKFLLTVLV-KPSGTRCF--VDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTM 165 (214)
T ss_dssp SCC-GGGCEEEEEEEEETTEEEEEEEEEEEEC-CCBSCEEE--EESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCC
T ss_pred cCC-hhhCeEEEEEEEeCCCccccEEEEEEEc-CCCCceee--eecceecCCcEEEEecCCCCCCCCEEEEEECCCCCcc
Confidence 999 9999999999999888777788888885 55443322 22337889999999999 88899999999954 333
Q ss_pred cCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe
Q psy14886 131 GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178 (505)
Q Consensus 131 ~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~ 178 (505)
... ......++.|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 166 ~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 166 PTP-WLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212 (214)
T ss_dssp CGG-GGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred Ccc-ceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeC
Confidence 221 11122345799999999999999999999999998888888753
No 154
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.86 E-value=1.2e-21 Score=172.77 Aligned_cols=166 Identities=14% Similarity=0.180 Sum_probs=119.8
Q ss_pred CCCCCceEEEEEEec---cCCCeEEEEECCEECc----CC--------C-----------CCCCCCCcEEEE---CCeEE
Q psy14886 1 MDNQADLTWTCEAFG---VPDVTYSWFRNGELLN----SE--------T-----------LPLEDQDRYFIQ---DNVLT 51 (505)
Q Consensus 1 v~~G~~~~l~C~~~~---~p~~~~~W~~~~~~l~----~~--------~-----------~~~~~~~~~~~~---~~~L~ 51 (505)
|.+|++++|.|.+.+ .|.+.+.|+|++.... .. . ......+|+.+. +.+|.
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~L~ 93 (250)
T 2fbo_J 14 VHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLR 93 (250)
T ss_dssp ECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCCEE
T ss_pred EecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcceEE
Confidence 468999999999987 6789999999875431 00 0 000123444443 25899
Q ss_pred EEcCCCCCCCeEEEEEEEcccCce-----EeeEEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEE
Q psy14886 52 IRYLNPERDPAMYQCRAKNQLKTR-----YSSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124 (505)
Q Consensus 52 i~~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~ 124 (505)
|.+++ .+|+|.|+|.+.+..+.. ...+.|.|... +|.+.... .....+.+|+.+.|.|.+.+.|.+.+.|+
T Consensus 94 I~~v~-~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~-~~~~~v~~g~~v~L~C~~~g~p~p~v~W~ 171 (250)
T 2fbo_J 94 LTHVH-PQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVST-AEVVQVDEGNDITMTCPCTDCANANVTWY 171 (250)
T ss_dssp ECSCC-GGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECC-CSEEECCTTCCEEECCCEESCTTCEEEEE
T ss_pred EeeCC-hhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEec-CceEEecCCCcEEEEEEecCCCCCeeEEE
Confidence 99999 999999999999876643 34677777753 23333322 34567788999999999999888999999
Q ss_pred ECCEEecCCC------------------------cEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 125 KDGNIIGSGG------------------------RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 125 ~~g~~~~~~~------------------------~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
+++..+.... +........|.|.++..+|+|.|+|.|.|..|..
T Consensus 172 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 239 (250)
T 2fbo_J 172 TGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGEL 239 (250)
T ss_dssp EEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGG
T ss_pred eCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCcccc
Confidence 9988764321 1112233679999999999999999999966543
No 155
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.86 E-value=1.5e-20 Score=158.02 Aligned_cols=173 Identities=21% Similarity=0.305 Sum_probs=130.4
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEec--CCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCcee--eeE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKG 172 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~--~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~--~~~ 172 (505)
....+.+|+++.|.|.+.+.|.+.+.|++++..+. ...++....+++|.|.++...|+|.|+|.+.+..+... ..+
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 89 (189)
T 2v5t_A 10 SPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDI 89 (189)
T ss_dssp SSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEE
T ss_pred CCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEE
Confidence 34678999999999999998989999999988775 34566666778899999999999999999998875443 335
Q ss_pred EEEEEeCCeeeeeCCC-ceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCC
Q psy14886 173 RLIVLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 251 (505)
Q Consensus 173 ~l~v~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 251 (505)
.+.+..+|.+...... ...+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ......+..|.|..+..+
T Consensus 90 ~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~g~~~~~~~~-----~~~~~~~~~L~i~~~~~~ 162 (189)
T 2v5t_A 90 IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP--AISWFRNGKLIEENEK-----YILKGSNTELTVRNIINS 162 (189)
T ss_dssp EEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCC--EEEEEETTEECCCSSS-----EEEETTTTEEEECSCCGG
T ss_pred EEEecCCCCcccccccccccccCCCcEEEEEEEccCCCC--eEEEEECCEECcCCCc-----EEEecCCCEEEEcCCChh
Confidence 5666555554432221 3345679999999999988765 5779999988765321 222334578999999999
Q ss_pred CCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 252 DAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 252 ~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
|.|.|+|.|.|..|.....+.|.|.
T Consensus 163 d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 163 DGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hCeeEEEEEEeCCCceeEEEEEEEE
Confidence 9999999999999998888887764
No 156
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.86 E-value=7.6e-21 Score=162.79 Aligned_cols=182 Identities=20% Similarity=0.218 Sum_probs=129.3
Q ss_pred ceEEeeCC--CeEEEEeecCCCCCCeEEEEEC---CEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeee
Q psy14886 97 SETYAGEG--GNVTIFCNPEAAPKPKFVWKKD---GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK 171 (505)
Q Consensus 97 ~~~~v~~g--~~v~l~C~~~~~p~~~i~W~~~---g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~ 171 (505)
..+.+.+| ++++|.|.+.+ |.+.+.|+++ |..+..+.+......+.|.|.+++.+|+|.|+|.|.|..+.....
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~ 93 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSI 93 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECC
T ss_pred eEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEEE
Confidence 56778999 99999999976 6689999884 666655545555556679999999999999999999855444333
Q ss_pred -EEEEEEe--CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCC-C-cccCCe---eeecCCeE
Q psy14886 172 -GRLIVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL-N-ELETPN---INIDGGLL 243 (505)
Q Consensus 172 -~~l~v~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~-~-~~~~~~---~~~~~~~l 243 (505)
+.|.|.. .|.+....+..+.+..|+.+.|.|.+.+.+.+.+.+.|.+++..+..... . ...... .....+.|
T Consensus 94 ~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L 173 (213)
T 2x1w_L 94 MYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTL 173 (213)
T ss_dssp CEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEE
T ss_pred EEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEE
Confidence 5666643 23333344445588999999999999987766667889988765322100 0 000000 01223479
Q ss_pred EEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 244 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 244 ~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 174 ~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 174 TIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--
T ss_pred EECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccc
Confidence 999999999999999999999999999999998765
No 157
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.86 E-value=1.6e-21 Score=162.99 Aligned_cols=162 Identities=22% Similarity=0.270 Sum_probs=122.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCC--C-----CCCCCCCcEEEE-------CCeEEEEcCCCCCCCeEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSE--T-----LPLEDQDRYFIQ-------DNVLTIRYLNPERDPAMYQC 66 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~--~-----~~~~~~~~~~~~-------~~~L~i~~~~~~~d~G~Y~C 66 (505)
+.+|++++|.|.+.+.|.+.+.|+|++..+... . .......|+... ..+|.|.+++ .+|+|.|+|
T Consensus 7 ~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~-~~D~G~Y~C 85 (184)
T 2ny1_B 7 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLK-IEDSDTYIC 85 (184)
T ss_dssp EETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCC-GGGCEEEEE
T ss_pred EeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCC-HHHCEEEEE
Confidence 468999999999998888999999997531100 0 000113344432 3459999999 999999999
Q ss_pred EEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEE
Q psy14886 67 RAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI 146 (505)
Q Consensus 67 ~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i 146 (505)
.+.+..+ .+.|.|.... . .....+.+|++++|.|.+.+.|.+.+.|++++..+ ....+.|.|
T Consensus 86 ~~~~~~~----~~~l~V~~~~----~---~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~-------~~~~~~L~i 147 (184)
T 2ny1_B 86 EVEDQKE----EVQLLVFGLT----A---NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGGKTLSV 147 (184)
T ss_dssp EETTEEE----EEEEEEEEEE----E---SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE-------EEESSEEEE
T ss_pred EEEcCCC----cEEEEEEEec----C---CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc-------ccCceEEEE
Confidence 9987643 4456665311 1 12235789999999999999999999999987544 234678999
Q ss_pred cCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCe
Q psy14886 147 SPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181 (505)
Q Consensus 147 ~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~ 181 (505)
.++..+|+|.|+|.|.|..+.....+.|.|...|.
T Consensus 148 ~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 148 SQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred ecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 99999999999999999988888888888876554
No 158
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.86 E-value=1.5e-21 Score=165.31 Aligned_cols=156 Identities=17% Similarity=0.269 Sum_probs=109.8
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEccc-C--ceEe
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQL-K--TRYS 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~-~--~~~~ 77 (505)
|.+|++++|.|.+.+.|. .+.|+|++..+.... ...+.....++|.|.+++ .+|+|.|+|.+.|.. + ....
T Consensus 16 v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~----~~~~~~~~~~~L~i~~v~-~~D~G~Y~C~a~n~~~g~~~~s~ 89 (198)
T 1ugn_A 16 ITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWIT----RIPQELVKKGQFPIPSIT-WEHTGRYRCYYGSDTAGRSESSD 89 (198)
T ss_dssp EETTCCEEEEEECCTTCC-CEEEEESSSCCHHHH----TSCHHHHTTTEEEESSCC-GGGCEEEEEEEEETTTEECCCCC
T ss_pred ccCCCcEEEEEEecCCCc-EEEEEECCccccccc----cccccCCcccEEEECCCC-HHHCeEEEEEEECCCCCcccCCc
Confidence 468999999999988765 699999998764110 011112245789999999 999999999999876 4 2344
Q ss_pred eEEEEEEecC--CCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcE-EEee----CCCEEEcCCC
Q psy14886 78 SAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFE----NGNLLISPVS 150 (505)
Q Consensus 78 ~~~l~v~~~~--p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~-~~~~----~~~l~i~~v~ 150 (505)
.+.|.|...+ |.+... +...+.+|++++|.|.+.+. .+.+.|+++|..+...... .... .+.|.|.++.
T Consensus 90 ~~~l~V~~~~~~p~i~~~---~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 165 (198)
T 1ugn_A 90 PLELVVTGAYIKPTLSAQ---PSPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVS 165 (198)
T ss_dssp CEEEEEECSSCCCEEEEE---SCSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCC
T ss_pred cEEEEEcccccCCccccC---CccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccC
Confidence 5777777532 333222 22468899999999999888 7799999999876432211 1111 2579999999
Q ss_pred CCCCEEEEEEEEcCCC
Q psy14886 151 RDDSGIYSCTATNVHG 166 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g 166 (505)
.+|+|.|+|.|.|..+
T Consensus 166 ~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 166 PSRRWWYRCYAYDSNS 181 (198)
T ss_dssp TTSCEEEEEEEECTTS
T ss_pred cccCeEEEEEEEeCCC
Confidence 9999999999999865
No 159
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.86 E-value=1.5e-20 Score=164.60 Aligned_cols=196 Identities=21% Similarity=0.324 Sum_probs=139.4
Q ss_pred cCCCccCCC--CCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCc----EEEeeCCCEEEcCCCCCCCEEEEE
Q psy14886 86 LKPSFKKRP--LESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR----RKIFENGNLLISPVSRDDSGIYSC 159 (505)
Q Consensus 86 ~~p~~~~~~--~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~----~~~~~~~~l~i~~v~~~d~G~y~C 159 (505)
.+|.|...+ ....+.+.+|+++.|.|.+.+.|.+.+.|+++|..+....+ ........|.|.+++..|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 355544322 13457899999999999999999999999999998764322 223345579999999999999999
Q ss_pred EEEcCCCceeeeEEEEEEeC----CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEe----CCEEecCCCCCcc
Q psy14886 160 TATNVHGMDESKGRLIVLHG----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH----NGVRIGNMDLNEL 231 (505)
Q Consensus 160 ~~~~~~g~~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~----~~~~~~~~~~~~~ 231 (505)
.+.+..+.....+.+.|... |......+....+..|+.+.|.|.+.+.|.+ .+.|++ ++..+........
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p--~v~W~~~~~~~g~~~~~~~~~~~ 167 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP--HIQWLKHVEVNGSKVGPDGTPYV 167 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC--EEEEEEECCSSSCSSCTTTCCCE
T ss_pred EEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC--EEEEEEcccCCCcccCCCCceee
Confidence 99999888888888888762 2233333456677889999999999988765 677998 6665543321110
Q ss_pred cCCe-----eeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCC
Q psy14886 232 ETPN-----INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 283 (505)
Q Consensus 232 ~~~~-----~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~ 283 (505)
.... .......|.|..+..+|.|.|+|.|.|..|.....+.|.|..+|.++.
T Consensus 168 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~ 224 (241)
T 3grw_A 168 TVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEE 224 (241)
T ss_dssp EEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--------
T ss_pred eeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCc
Confidence 0000 011235799999999999999999999999999999999998887764
No 160
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.86 E-value=3.5e-21 Score=176.20 Aligned_cols=168 Identities=23% Similarity=0.271 Sum_probs=133.9
Q ss_pred CCCCceEEEEEEec----------cCCCeEEEEECCEECcCCCCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEEEEE
Q psy14886 2 DNQADLTWTCEAFG----------VPDVTYSWFRNGELLNSETLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMYQCR 67 (505)
Q Consensus 2 ~~G~~~~l~C~~~~----------~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y~C~ 67 (505)
.+|+.+.|.|.+.+ .|.+.+.|+|++..+.. ..++... + ..|.|.+++ .+|+|.|+|.
T Consensus 111 ~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~-------~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~ 182 (317)
T 2y25_A 111 LSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRY-------SDRVKTGVTGEQIWLQINEPT-PNDKGKYVME 182 (317)
T ss_dssp TCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCC-------CSSEEEEECSSEEEEEEESCC-GGGCEEEEEE
T ss_pred ccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCC-------CCCeEEeccCCEEEEEECcCC-cccCeeEEEE
Confidence 47888888888876 68899999999998873 3444442 2 349999999 9999999999
Q ss_pred EEcccCceEeeEEEEEEe-------------------cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCE
Q psy14886 68 AKNQLKTRYSSAQLRVLT-------------------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN 128 (505)
Q Consensus 68 ~~~~~~~~~~~~~l~v~~-------------------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~ 128 (505)
+.|..+.....+.+.|.. .+|.+... .+....+.+|+.+.|.|.+.|.|.+.+.|+++|.
T Consensus 183 a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~ 261 (317)
T 2y25_A 183 LFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGG-LPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEK 261 (317)
T ss_dssp EECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEB-CCSEEEEETTSBBCEEEEEECSSCCEEEEEESSS
T ss_pred EEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCccccc-CCccEEEEcCCEEEEEEEEecCCCCEEEEEECCE
Confidence 999888777666666531 01222211 1345678999999999999999999999999999
Q ss_pred EecCCCcEEEeeC-C---CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe
Q psy14886 129 IIGSGGRRKIFEN-G---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178 (505)
Q Consensus 129 ~~~~~~~~~~~~~-~---~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~ 178 (505)
.+..+.++.+... + .|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 262 ALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 9987777666544 4 699999999999999999999999998888888853
No 161
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=2.1e-21 Score=179.06 Aligned_cols=176 Identities=24% Similarity=0.423 Sum_probs=135.7
Q ss_pred CCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEEE
Q psy14886 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQL 81 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 81 (505)
.+|+.++|.|.+.+.|.+.+.|+|++..+...... ..........+|.|.+++ .+|+|.|+|.+.|..|.....+.|
T Consensus 136 ~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l 212 (334)
T 1ry7_B 136 PAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRI--GGIKLRHQQWSLVMESVV-PSDRGNYTCVVENKFGSIRQTYTL 212 (334)
T ss_dssp ETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSST--TCCCCCTTTTEEEECSCC-GGGCCCEEEEEEETTEEEEEEEEE
T ss_pred cCCCcEEEEEEccCCCCCeEEEEECCEECcccccc--cceecccceEEEEECCCC-cccCEEEEEEEEeCCCCEEEEEEE
Confidence 47999999999999999999999999887643110 000111134689999999 999999999999998888778888
Q ss_pred EEEecCC---CccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEE----CCEEecCCCcE--EEee----------CC
Q psy14886 82 RVLTLKP---SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK----DGNIIGSGGRR--KIFE----------NG 142 (505)
Q Consensus 82 ~v~~~~p---~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~----~g~~~~~~~~~--~~~~----------~~ 142 (505)
.|...++ .+... .+....+.+|+.+.|.|.+.+.|.+.+.|++ +|..+..+... .+.. ..
T Consensus 213 ~V~~~~~~~p~~~~~-~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (334)
T 1ry7_B 213 DVLERSPHRPILQAG-LPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELE 291 (334)
T ss_dssp EEECCCCSSCBCCTT-CSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCC
T ss_pred EEecCCCCCCceEec-CCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccccc
Confidence 8886332 22221 2345678999999999999999999999999 67666543221 1111 12
Q ss_pred CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCe
Q psy14886 143 NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181 (505)
Q Consensus 143 ~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~ 181 (505)
.|.|.++..+|+|.|+|.|.|..|.....+.|.|...|+
T Consensus 292 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 292 VLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp CEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCC
T ss_pred EEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCC
Confidence 699999999999999999999999999999999977654
No 162
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.86 E-value=3.9e-20 Score=169.88 Aligned_cols=171 Identities=15% Similarity=0.189 Sum_probs=119.8
Q ss_pred CceEEeeCCCeEEEEeecCCC-CCCeEEEEECCEEec---------CCCcEEE--------eeCCCEEEcCCCCCCCEEE
Q psy14886 96 ESETYAGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIG---------SGGRRKI--------FENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 96 ~~~~~v~~g~~v~l~C~~~~~-p~~~i~W~~~g~~~~---------~~~~~~~--------~~~~~l~i~~v~~~d~G~y 157 (505)
+..+.+.+|+++.|.|.+.+. |.+.+.|++++.... ...+... .....|.|.+++.+|+|.|
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 89 (327)
T 2wng_A 10 DKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTY 89 (327)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEE
T ss_pred CCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEE
Confidence 356789999999999999987 888999999875321 1113332 2234699999999999999
Q ss_pred EEEEEcCCCce-----eeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcc-
Q psy14886 158 SCTATNVHGMD-----ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL- 231 (505)
Q Consensus 158 ~C~~~~~~g~~-----~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~- 231 (505)
+|.+.|..+.. ...+.|.|...|.......+...+..|+.+.|.|.+.+.+++.+.+.|+++|..+........
T Consensus 90 ~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~ 169 (327)
T 2wng_A 90 YCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDP 169 (327)
T ss_dssp EEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEEC
T ss_pred EEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccccccccc
Confidence 99999986642 134677777655432222334567889999999999998876668889999988764321000
Q ss_pred -cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 232 -ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 232 -~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.........+.|.|.....++.|.|+|.|.|..+.
T Consensus 170 ~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 170 VGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp SSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred ccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 00011111235667767777789999999998876
No 163
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.86 E-value=2e-21 Score=162.30 Aligned_cols=144 Identities=19% Similarity=0.337 Sum_probs=108.0
Q ss_pred CCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEc-CCCCCCCeEEEEEEEcccCceEeeEEE
Q psy14886 3 NQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRY-LNPERDPAMYQCRAKNQLKTRYSSAQL 81 (505)
Q Consensus 3 ~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~-~~~~~d~G~Y~C~~~~~~~~~~~~~~l 81 (505)
+|++++|.|.+.+ +. .|+|+|+|..+... .+.+|.|.+ ++ .+|+|.|+|.|.|..|.......+
T Consensus 13 ~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~------------~~~~L~I~~~~~-~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 13 SGTSVELTCPLDS-DE-NLKWEKNGQELPQK------------HDKHLVLQDFSE-VEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp ETTEEEEECSSCC-CT-TCEEEETTEEECSC------------CCSEEEEESCCT-TTSCEEEEEECSSCCCCCCEEECC
T ss_pred CCcEEEEEEeCCC-CC-ceEEEECCEECCCC------------CCCEEEECCCCc-cccCEEEEEEEEeCCCcEEEEEEE
Confidence 5999999999987 43 49999999998732 245899999 99 999999999999988875444444
Q ss_pred EEEecCCCc-----------------c--CCCCCce---EEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe
Q psy14886 82 RVLTLKPSF-----------------K--KRPLESE---TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF 139 (505)
Q Consensus 82 ~v~~~~p~~-----------------~--~~~~~~~---~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~ 139 (505)
.|....+.. . ....... ..+.+|+++.|.|.+ |.+.+.|+|+|..+.....
T Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~---- 150 (186)
T 1jbj_A 78 RVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA---- 150 (186)
T ss_dssp CCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC----
T ss_pred EEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC----
Confidence 443321111 0 0000001 124499999999998 7789999999999864322
Q ss_pred eCCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 140 ENGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 140 ~~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
..+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 45679999999999999999999987754
No 164
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.86 E-value=2e-20 Score=162.76 Aligned_cols=186 Identities=22% Similarity=0.350 Sum_probs=138.7
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCc----EEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR----RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~----~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~ 172 (505)
....+.+|+++.|.|.+.+.|.+.+.|+++|..+....+ ........|.|.++...|+|.|+|.+.|..+.....+
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 456789999999999999989899999999998864332 2223345799999999999999999999988888788
Q ss_pred EEEEEeCC----eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEe----CCEEecCCCCCcccC----CeeeecC
Q psy14886 173 RLIVLHGP----SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH----NGVRIGNMDLNELET----PNINIDG 240 (505)
Q Consensus 173 ~l~v~~~p----~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~----~~~~~~~~~~~~~~~----~~~~~~~ 240 (505)
.|.|...+ ......+....+..|+.+.|.|.+.+.|.+ .+.|++ +|..+.......... .......
T Consensus 107 ~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 184 (231)
T 3ojm_B 107 HLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP--HIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNA 184 (231)
T ss_dssp EEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCC--EEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCT
T ss_pred EEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCC--EEEEEECCCCCCccccCCCcceEeEecccccccCCc
Confidence 88887632 222223456778899999999999998766 667988 666554322111000 0011234
Q ss_pred CeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCc
Q psy14886 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 284 (505)
Q Consensus 241 ~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~ 284 (505)
..|.|..+..+|.|.|+|.|.|..|.....+.|.|..+|.+|..
T Consensus 185 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~~ 228 (231)
T 3ojm_B 185 EVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGR 228 (231)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-----
T ss_pred cEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCcc
Confidence 57999999999999999999999999999999999999888754
No 165
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.86 E-value=3.6e-20 Score=169.04 Aligned_cols=255 Identities=15% Similarity=0.130 Sum_probs=164.8
Q ss_pred ceEEeeCCCeEEEEeecC-CCCCCeEEEEECCEEecCCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEcCCCceeeeE
Q psy14886 97 SETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKG 172 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~ 172 (505)
..+.+.+|+.+.|.|... +.|.+.+.|++++..+....++.+...+ .|.|.++..+|+|.|+|.+.|..|... .+
T Consensus 9 ~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~ 87 (312)
T 2y23_A 9 VVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SY 87 (312)
T ss_dssp CEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EE
T ss_pred eeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EE
Confidence 346788999999998875 5688899999999999877777766544 699999999999999999999888544 45
Q ss_pred EEEEEe------------CCeeeeeCCCceEEEeeccEEEEEEee-ecCCCCeEEEEEeCCEEecCCCCCcccCCeeee-
Q psy14886 173 RLIVLH------------GPSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELETPNINI- 238 (505)
Q Consensus 173 ~l~v~~------------~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~- 238 (505)
.+.|.. .|.+.........+..|+.+.|.|.+. +.|. ..+.|++++..+..... .....
T Consensus 88 ~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~--~~v~W~~~~~~i~~~~~-----~~~~~~ 160 (312)
T 2y23_A 88 LIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGN--AKVNYIFNEKEIFEGPK-----YKMHID 160 (312)
T ss_dssp EECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSS--CEEEEEETTEEECSSSS-----CEEEEE
T ss_pred EEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCC--CEEEEEECCEECeeCCc-----EEEEEc
Confidence 555532 444433322356778899999999998 5554 46779999998876421 11111
Q ss_pred ---cCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEE-------------------cCCCCCCCceEEEEEeCCeEE
Q psy14886 239 ---DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-------------------EGPPGLPGGVQVVEVHKTSAT 296 (505)
Q Consensus 239 ---~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v-------------------~~~p~~p~~~~~~~~~~~~v~ 296 (505)
....|.|..+..+|.|.|+|.+.+..+.......+.. ..+|.....+......+..+.
T Consensus 161 ~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~ 240 (312)
T 2y23_A 161 RNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVL 240 (312)
T ss_dssp TTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEE
T ss_pred cCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEE
Confidence 1134999999999999999999875544433333310 011211111234455778899
Q ss_pred EEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 297 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 297 l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
|.|.... ..+...+.|.. .+. ......... ...+...+.+.+ +...+.+.|+|.|.|..|...
T Consensus 241 l~C~~~~--~p~~~~v~W~~--~g~--~~~~~~~~~-----~~~~~~~L~I~~-v~~~d~G~Y~C~a~N~~G~~~ 303 (312)
T 2y23_A 241 LKCKVAN--IKKETHIVWYK--DER--EISVDEKHD-----FKDGICTLLITE-FSKKDAGIYEVILKDDRGKDK 303 (312)
T ss_dssp EEEEEES--CCSSCEEEEEE--TTE--EEEEECCC---------CEEEEEECS-CSGGGCEEEEEEEESTTCCEE
T ss_pred EEEEEcC--CCCCCEEEEee--CCE--ECCCCCcEE-----EECCEEEEEECc-CCHHHCEEEEEEEEcCCCcee
Confidence 9998431 11111333322 110 011000000 001223445555 999999999999999999764
No 166
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.85 E-value=3.6e-19 Score=166.83 Aligned_cols=226 Identities=13% Similarity=0.115 Sum_probs=165.4
Q ss_pred cCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEe
Q psy14886 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 318 (505)
Q Consensus 239 ~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~ 318 (505)
....+.+..+.....+.|+..|.|..|.............| +|.++.+.....+++.|+|+++. +.++.+|.|+++.
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p-~p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~ 133 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVP-QLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVA 133 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCC-CCSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEE
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCC-CCceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEE
Confidence 45678899998888899999999877754433333334445 47889998889999999999874 4678999999987
Q ss_pred CCCCC-eEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeec
Q psy14886 319 NWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397 (505)
Q Consensus 319 ~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~ 397 (505)
.+... +...... .....+.+.+ |.+++.|.|+|.|.|..|.|.++.. ...+ .+ .+|.++.+..
T Consensus 134 ~~~~~~~~~~~~~---------~~~~~~~i~~-L~p~t~Y~~~V~a~~~~g~s~~s~~--~~~t---~~-~~p~~l~~~~ 197 (375)
T 3t1w_A 134 AGEGIPIFEDFVD---------SSVGYYTVTG-LEPGIDYDISVITLINGGESAPTTL--TQQT---AV-PPPTDLRFTN 197 (375)
T ss_dssp SSSCCSCEEEEEC---------TTCCEEEEEC-CCTTCEEEEEEEEEETTEECCCEEE--EEEC---CC-CCCEEEEEES
T ss_pred CCCCCceeEEEcC---------CCcceEEEeC-CCCCCEEEEEEEEEeCCcccCCeee--eeec---CC-CCCceeEEEe
Confidence 65432 2221111 1223445555 9999999999999999999887654 3333 23 3788999988
Q ss_pred cccccEEEEEEeCCccccCCCCceEEEEEEEcC-CCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCC
Q psy14886 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476 (505)
Q Consensus 398 ~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~ 476 (505)
...+++.|.|+++ .++.+.+|.|+|+..+ ...|....... ....+.|.+|.|++.|.|+|.|+|..|.|++
T Consensus 198 ~~~~si~l~W~~p----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~ 269 (375)
T 3t1w_A 198 IGPDTMRVTWAPP----PSIDLTNFLVRYSPVKNEEDVAELSISP----SDNAVVLTNLLPGTEYVVSVSSVYEQHESTP 269 (375)
T ss_dssp CCSSCEEEEEECC----SSCCCCEEEEEEEEGGGTTCCEEEEECT----TCCEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred cccCEEEEEEcCC----CCCCccEEEEEEEeCCCCCCcEEEEcCC----CcCEEEeCCCCCCCEEEEEEEEEcCCCcCCc
Confidence 8899999999983 2477999999999877 34555444332 3467889999999999999999999999987
Q ss_pred CceEEEeecceEEEEE
Q psy14886 477 SEVVTIWHDPLVIISY 492 (505)
Q Consensus 477 s~~~~~~t~p~~~~~~ 492 (505)
+... ..|.|.....+
T Consensus 270 ~~~~-~~t~p~~P~~l 284 (375)
T 3t1w_A 270 LRGR-QKTGLDSPTGI 284 (375)
T ss_dssp EEEE-EECCCCCCEEE
T ss_pred eeeE-EecCCCCCCcc
Confidence 7543 44554433333
No 167
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.85 E-value=3.9e-20 Score=156.22 Aligned_cols=175 Identities=21% Similarity=0.366 Sum_probs=136.0
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecC-CCCCCeEEEEECCEEecCCC--cEEEe--e--------CCCEEEcCCCCCC
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGG--RRKIF--E--------NGNLLISPVSRDD 153 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~i~W~~~g~~~~~~~--~~~~~--~--------~~~l~i~~v~~~d 153 (505)
+|.|...+ ....+.+|+++.|.|.+. +.|.+.+.|+++|..+.... +..+. . .+.|.|.++...|
T Consensus 2 ~~~~~~~p--~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 79 (195)
T 2c5d_C 2 ESPFVGNP--GNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSD 79 (195)
T ss_dssp CCSEEECC--CCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTT
T ss_pred CCeeccCh--hheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccC
Confidence 45555554 556799999999999998 88889999999999987652 22222 1 2469999999999
Q ss_pred CEEEEEEEEcCCCceeee-EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCccc
Q psy14886 154 SGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 232 (505)
Q Consensus 154 ~G~y~C~~~~~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 232 (505)
+|.|+|.+.+..+..... +.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ ..+.|++++..+......
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p-~~v~W~~~~~~~~~~~~~--- 154 (195)
T 2c5d_C 80 TGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLE-EPEDRTVAANTPFNLSCQAQGPPEP-VDLLWLQDAVPLATAPGH--- 154 (195)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECCSCEEEE-CCCCEEECTTCCEEEEEEEECSSCC-CEEEEEESSCBSSSSTTS---
T ss_pred CcEEEEEEEeCCCceecccEEEEEecCCeEEc-CCCcEEEcCCCEEEEEeECCCCCCC-CEEEEEECCEeccCCCCc---
Confidence 999999999987765554 7888877776544 4556778889999999999988765 156799998877653211
Q ss_pred CCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE-EEEEEEE
Q psy14886 233 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIV 275 (505)
Q Consensus 233 ~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~-~~~~l~v 275 (505)
.....|.|..+. |.|.|+|.|.|..|... ..+.|.|
T Consensus 155 -----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 155 -----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp -----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 345678888876 78999999999999885 6888887
No 168
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.85 E-value=1.2e-20 Score=159.86 Aligned_cols=162 Identities=19% Similarity=0.255 Sum_probs=124.6
Q ss_pred EEeeCCCeEEEEeecCCCCCCe-EEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEE
Q psy14886 99 TYAGEGGNVTIFCNPEAAPKPK-FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p~~~-i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~ 177 (505)
..+.+|++++|.|.+.+.|.+. +.|+++|..+... .+.|.|.+++.+|+|.|+|.+.|. .....+.|.|.
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~-------~~~L~i~~v~~~D~G~Y~C~a~n~--~~s~~~~l~V~ 87 (204)
T 3sgj_C 17 YRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ-------ASSYFIDAATVDDSGEYRCQTQLS--TLSDPVQLEVH 87 (204)
T ss_dssp SEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC-------SSEEEESSCCGGGCEEEEEEETTS--BCCCCEEEEEE
T ss_pred eEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC-------ccEEEEecccccCCEEEEEEeCCC--cccccEEEEEe
Confidence 5689999999999999987764 9999999988654 267999999999999999999874 44456778887
Q ss_pred eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEE
Q psy14886 178 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 257 (505)
Q Consensus 178 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~ 257 (505)
..|..... ....+..|+.+.|.|.+.+.++ ...+.|+++|..+.. ......|.|..+..+|.|.|+
T Consensus 88 ~~p~~~~~--~~~~v~~G~~v~L~C~~~~~~p-~~~v~W~k~g~~~~~-----------~~~~~~L~i~~v~~~D~G~Y~ 153 (204)
T 3sgj_C 88 IGWLLLQA--PRWVFKEEDPIHLRCHSWKNTA-LHKVTYLQNGKGRKY-----------FHHNSDFYIPKATLKDSGSYF 153 (204)
T ss_dssp CSSEEEEC--SCSEEETTCCEEEEEEEGGGCC-CEEEEEEETTEEEEE-----------EEECCCEEESSCCGGGCEEEE
T ss_pred cCceEecC--CceeEeCCCcEEEEEEecCCCC-CceEEEEECCcEeec-----------ccCCceEEECcCCcccCEEEE
Confidence 77655433 3367788999999999977643 357789999987643 123568999999999999999
Q ss_pred EEEEec-CCcEEEEEEEEEcCCCCCCC
Q psy14886 258 CVVKST-VGKISTKTTVIVEGPPGLPG 283 (505)
Q Consensus 258 C~~~n~-~g~~~~~~~l~v~~~p~~p~ 283 (505)
|.|.|. .+..+..+.|.|..+|..|.
T Consensus 154 C~a~n~~~~~~s~~~~l~V~~~~~~P~ 180 (204)
T 3sgj_C 154 CRGLVGSKNVSSETVQITITQGLAVST 180 (204)
T ss_dssp EEEEETTEEEECCCEEEEEEC------
T ss_pred EEEEeCCCceecCcEEEEEeCcCCCCc
Confidence 999994 44556678888888776653
No 169
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.85 E-value=4e-21 Score=159.20 Aligned_cols=156 Identities=22% Similarity=0.314 Sum_probs=117.7
Q ss_pred CCCCCceEEEEEEeccCC-CeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 1 MDNQADLTWTCEAFGVPD-VTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~-~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
|.+|++++|.|.+.+.+. ..+.|+|++..+.. .+++|.|.+++ .+|+|.|+|.+.+..+ ...+
T Consensus 16 v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~-------------~~~~L~i~~v~-~~d~G~Y~C~~~~~~~--s~~~ 79 (176)
T 1f2q_A 16 IFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE-------------TNSSLNIVNAK-FEDSGEYKCQHQQVNE--SEPV 79 (176)
T ss_dssp EETTCCEEEECCTTCC----CCEEEETTEECSC-------------CSSEEEECSCC-GGGCEEEEEECTTSSC--CCCE
T ss_pred eecCCcEEEEEeCCCCCCcceEEEEECCeECCC-------------CceEEEEeccc-eecCEEEEEEcCCccc--cccE
Confidence 468999999999988776 46999999998862 25799999999 9999999999987554 3356
Q ss_pred EEEEEecCCCccCCCCCceEEeeCCCeEEEEeecC-CCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEE
Q psy14886 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 158 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 158 (505)
.|.|.. ++..... ....+.+|+.+.|.|.+. +.|.+.+.|+++|..+.... .++.|.|.++..+|+|.|+
T Consensus 80 ~l~V~~-~~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~-----~~~~L~i~~v~~~d~G~Y~ 150 (176)
T 1f2q_A 80 YLEVFS-DWLLLQA---SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY-----ENHNISITNATVEDSGTYY 150 (176)
T ss_dssp EEEEEC-SSEEEEE---SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC-----CSSEEEESSCCGGGCEEEE
T ss_pred EEEEeC-cceeecC---CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec-----CCCeEEECCCCcccCEEEE
Confidence 666662 3322221 224578999999999994 56677999999999875321 2467999999999999999
Q ss_pred EEEEcCCCce-eeeEEEEEEeCCe
Q psy14886 159 CTATNVHGMD-ESKGRLIVLHGPS 181 (505)
Q Consensus 159 C~~~~~~g~~-~~~~~l~v~~~p~ 181 (505)
|.|.|..+.. ...+.|.|..+|.
T Consensus 151 C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 151 CTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEEEETTEEEECCCEEEEEECSCC
T ss_pred EEEEeCCcceEecCEEEEEecCCC
Confidence 9999974443 3447888876653
No 170
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.85 E-value=6.4e-20 Score=153.01 Aligned_cols=172 Identities=22% Similarity=0.379 Sum_probs=132.6
Q ss_pred CCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeC-----CCEEEcCCCCCCCEEEEEEEE
Q psy14886 88 PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-----GNLLISPVSRDDSGIYSCTAT 162 (505)
Q Consensus 88 p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~-----~~l~i~~v~~~d~G~y~C~~~ 162 (505)
|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+....+...... +.|.|.++..+|+|.|+|.+.
T Consensus 3 ~~~~~~p--~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 3 LKLMGAP--VKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp ----CCC--EEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CEEEeCC--cceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 3444443 567899999999999999988899999999998876654444332 469999999999999999999
Q ss_pred cCCCce-eeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCC
Q psy14886 163 NVHGMD-ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241 (505)
Q Consensus 163 ~~~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (505)
+..+.. ...+.|.|..+|.+... +....+..|+.+.|.|.+.+.|.| ..+.|++++..+.... ....
T Consensus 81 ~~~~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p-~~v~W~~~~~~~~~~~----------~~~~ 148 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEGVPFFTVE-PKDLAVPPNAPFQLSCEAVGPPEP-VTIVWWRGTTKIGGPA----------PSPS 148 (182)
T ss_dssp SCTTCEECCCEEEEEECSCEEEEC-CCCEEECTTCCEEEEEEEECSSSC-CEEEEEETTEECSCSE----------ESSE
T ss_pred cCCCcEEEEEEEEEEecCCeEEec-CcceEecCCCEEEEEeEecCCCCC-CEEEEEcCCeECCCCC----------CCce
Confidence 987754 45688888877766543 556778899999999999987765 2677999998875421 1456
Q ss_pred eEEEecCCCCCCEEEEEEEEecCCcEEE-EEEEEE
Q psy14886 242 LLEITNASFADAGEYECVVKSTVGKIST-KTTVIV 275 (505)
Q Consensus 242 ~l~i~~~~~~~~g~y~C~~~n~~g~~~~-~~~l~v 275 (505)
.|.|..+ +|.|.|+|.|.|..|.... .+.|.|
T Consensus 149 ~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 149 VLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 7888877 5889999999999998753 666665
No 171
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=165.78 Aligned_cols=156 Identities=16% Similarity=0.214 Sum_probs=113.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCc--eEee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT--RYSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~--~~~~ 78 (505)
|.+|++++|.|.+.+ +.+.+.|+|++..+......... ....++|.|.+++ .+|+|.|+|.+.|..+. ....
T Consensus 16 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~----~~~~~~L~i~~v~-~~D~G~Y~C~a~n~~g~~~~s~~ 89 (196)
T 3p2t_A 16 ISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLE----PKNKARFSIPSMT-EDYAGRYRCYYRSPVGWSQPSDP 89 (196)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCS----SSSEEEEEESSCC-GGGCEEEEEEEEETTEEBCCCCC
T ss_pred CCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccccccc----CCceEEEEeccCC-cccCceEEEEEeCCCcccCCCcc
Confidence 468999999999988 67899999999877521000000 0124689999999 99999999999998772 2335
Q ss_pred EEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcE----EEeeCCCEEEcCCCCC
Q psy14886 79 AQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRD 152 (505)
Q Consensus 79 ~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~----~~~~~~~l~i~~v~~~ 152 (505)
+.|.|... +|.+...+ . ..+.+|++++|.|.+.+. .+.+.|+++|..+...... .....+.|.|.+++.+
T Consensus 90 ~~l~V~~~~~~p~~~~~~--~-~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 165 (196)
T 3p2t_A 90 LELVMTGAYSKPTLSALP--S-PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSV 165 (196)
T ss_dssp EEEEEECSSCCCEEEEES--C-SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGG
T ss_pred EEEEecCCCCCCEEEeCC--c-ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEeCCCccc
Confidence 67777642 23333332 1 257899999999998774 4589999999866433221 1123467999999999
Q ss_pred CCEEEEEEEEcCCC
Q psy14886 153 DSGIYSCTATNVHG 166 (505)
Q Consensus 153 d~G~y~C~~~~~~g 166 (505)
|+|.|+|.|.|..+
T Consensus 166 d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 166 HGGTYRCFSSHGFS 179 (196)
T ss_dssp GCEEEEEEEECGGG
T ss_pred CCCeEEEEEEcCCC
Confidence 99999999999865
No 172
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.85 E-value=5.3e-21 Score=168.86 Aligned_cols=203 Identities=18% Similarity=0.248 Sum_probs=117.5
Q ss_pred CCCCCCCeEEEEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCC-----CCeEEEEEC--C
Q psy14886 55 LNPERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP-----KPKFVWKKD--G 127 (505)
Q Consensus 55 ~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p-----~~~i~W~~~--g 127 (505)
++ .+|+|.|+|.|. |.......+.+.. ++.+...+ ..+.+.+|++++|.|.+.+.+ .+.+.|+++ +
T Consensus 11 v~-~~dsg~Y~C~a~---g~~~~~~~~~~~~-~~~~~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g 83 (254)
T 2c1o_A 11 VR-PGTSVKLSCKAS---GYSFTNYWMNWLR-ELVMTQSP--LTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPG 83 (254)
T ss_dssp --------------------------------CCCEEEEC--SEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTT
T ss_pred ec-CCccEEEEEcCc---hhhhhhhhhheee-ceeEEeCC--ceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCC
Confidence 56 899999999998 4444444444443 44444333 557899999999999998887 489999973 3
Q ss_pred EEe------------cCCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEcCCCceee-eEEEEEEe---CCeeeeeCCC
Q psy14886 128 NII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVLH---GPSYYEQLPP 188 (505)
Q Consensus 128 ~~~------------~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~g~~~~-~~~l~v~~---~p~~~~~~~~ 188 (505)
..+ ....++.....+ +|.|.+++.+|+|.|+|.|.|..+.... ...+.|.. +|.+....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~- 162 (254)
T 2c1o_A 84 QSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPP- 162 (254)
T ss_dssp SCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECC-
T ss_pred CCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecC-
Confidence 221 112455444333 6999999999999999999987654332 24566643 333332222
Q ss_pred ceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCC-----cccCCeeeecCCeEEEecCCCCCCEEEEEEEEec
Q psy14886 189 KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN-----ELETPNINIDGGLLEITNASFADAGEYECVVKST 263 (505)
Q Consensus 189 ~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~ 263 (505)
......|+.+.|.|.+.+.+++.+.+.|+++|..+...... ......+ ...+.|.|..+..+|.|.|+|.|.|.
T Consensus 163 ~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~ 241 (254)
T 2c1o_A 163 SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTY-SMSSTLTLTKDEYERHNSYTCEATHK 241 (254)
T ss_dssp CHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCE-EEEEEEEEEHHHHHTCCEEEEEEECT
T ss_pred ChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcE-EEEEEEEeccccccCCCeEEEEEEcC
Confidence 22223577899999999865555678899999887653000 0000111 12357889999889999999999997
Q ss_pred CCc
Q psy14886 264 VGK 266 (505)
Q Consensus 264 ~g~ 266 (505)
...
T Consensus 242 ~~~ 244 (254)
T 2c1o_A 242 TST 244 (254)
T ss_dssp TCS
T ss_pred CCC
Confidence 765
No 173
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.85 E-value=2e-20 Score=158.23 Aligned_cols=179 Identities=16% Similarity=0.154 Sum_probs=127.4
Q ss_pred EEeeCCCeEEEEeecCCCCCCeEEEEECC-EEecCCCcEEE-eeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 99 TYAGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p~~~i~W~~~g-~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
..+.+|+++.|.|.+.|.|.+.+.|+++. ..+. ..... .....|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V 88 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEI 88 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEE
Confidence 44569999999999999999999999843 2211 11111 12335999999999999999999999887777788999
Q ss_pred EeCCeeeeeCCCceEEEeeccEEEEEEeeecCC-CCeEEEEEeCCEEecCCCCCcccC-CeeeecCCeEEEecCCCCCCE
Q psy14886 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHNGVRIGNMDLNELET-PNINIDGGLLEITNASFADAG 254 (505)
Q Consensus 177 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~~~g 254 (505)
..+|......+. ..+..|+.++|.|.+.+.++ +.+.+.|++++..+.......... .........|.|.....++.|
T Consensus 89 ~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g 167 (202)
T 1vca_A 89 YSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGK 167 (202)
T ss_dssp EBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTC
T ss_pred EeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCC
Confidence 877654433333 56889999999999998644 346789999998775422111000 001112235677777788899
Q ss_pred EEEEEEEecCCc-------EEEEEEEEEcCCCC
Q psy14886 255 EYECVVKSTVGK-------ISTKTTVIVEGPPG 280 (505)
Q Consensus 255 ~y~C~~~n~~g~-------~~~~~~l~v~~~p~ 280 (505)
.|+|.|.|..|. .+.++.|.|..+|.
T Consensus 168 ~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 168 VLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred eEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 999999998875 35677888887764
No 174
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.85 E-value=2e-21 Score=160.47 Aligned_cols=157 Identities=16% Similarity=0.171 Sum_probs=115.8
Q ss_pred CCCCceEEEEEEec--cCCCeEEEEECCEECcC---CCCCCCCCCcEEE-ECCeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 2 DNQADLTWTCEAFG--VPDVTYSWFRNGELLNS---ETLPLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 2 ~~G~~~~l~C~~~~--~p~~~~~W~~~~~~l~~---~~~~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
.+|++++|.|...+ .+.+.|.|+|++..+.. ........+|+.+ .+++|.|.+++ .+|+|.|+|.+.|..|..
T Consensus 9 ~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~-~~D~G~Y~C~~~n~~g~~ 87 (176)
T 1hng_A 9 ALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLT-RDDSGTYNVTVYSTNGTR 87 (176)
T ss_dssp ETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCC-GGGCEEEEEEEEETTCCE
T ss_pred EcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccc-cccCEEEEEEEEeCCCCE
Confidence 57999999995433 45678999999976531 1111123567766 46779999999 999999999999988886
Q ss_pred --EeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCC
Q psy14886 76 --YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDD 153 (505)
Q Consensus 76 --~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d 153 (505)
...+.|.|...+. .+.+ ...+..+.|.|.+.+.|.+.+.|+++|..+.... .+.|..+..+|
T Consensus 88 ~~~~~~~l~V~~~~~-------~p~i-~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~--------~~~i~~~~~~d 151 (176)
T 1hng_A 88 ILNKALDLRILEMVS-------KPMI-YWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR--------QKTMSYQWTNL 151 (176)
T ss_dssp EEEEEEEEEEECCCC-------CCEE-EEETTTTEEEEECSSCSSCEEEEEETTEEEEEES--------SSEEEEECSCC
T ss_pred EEEEEEEEEEeCCCC-------CCEE-EecCCcEEEEEEecCCCCcEEEEEECCEECCCCC--------cEEEEEEEccC
Confidence 4456777764211 1222 2335569999999999999999999998875432 24556788999
Q ss_pred CEEEEEEEEcCCCceeeeEEEE
Q psy14886 154 SGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 154 ~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
.|.|+|.|.|..|.....+.|.
T Consensus 152 ~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 152 RAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp SSCEEEEEEETTEEEEEEECCC
T ss_pred CeEEEEEEEecCCCceeccccc
Confidence 9999999999999877765543
No 175
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.85 E-value=3.5e-21 Score=164.87 Aligned_cols=166 Identities=19% Similarity=0.263 Sum_probs=116.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcE--EEECC--eEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY--FIQDN--VLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~--~~~~~--~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
|.+|++++|.|.+.+ +.+.|.|+|+|..+... ..+. ....+ +|.|.+++ .+|+|.|+|.+.|..+...
T Consensus 20 v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~------~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~n~~~~~~ 91 (218)
T 1uct_A 20 IPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYRE------IGRRLKFWNETDPEFVIDHMD-ANKAGRYQCQYRIGHYRFR 91 (218)
T ss_dssp EETTCCEEEEECCCT-TCSEEEEEEEETTEEEE------CSEECC----CCCEEEECSCC-GGGCEEEEEEEEETTTEEE
T ss_pred cCCCCCEEEEEEcCC-CCCEEEEEECCCccccc------ccccCCCCcceeeEEEEcccc-cccCEEEEEEEEcCCCcee
Confidence 458999999999987 67899999998765421 0111 12345 89999999 9999999999998765332
Q ss_pred --eeEEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCC
Q psy14886 77 --SSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD 152 (505)
Q Consensus 77 --~~~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~ 152 (505)
..+.|.|... +|.+...+ ...+.+|++++|.|.+.+.+.+.+.|+|+|..+... ......++.|.|.+++.+
T Consensus 92 ~s~~~~l~V~~~~~~P~i~~~p---~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~-~~~~~~~~~L~I~~v~~~ 167 (218)
T 1uct_A 92 YSDTLELVVTGLYGKPFLSADR---GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ-HQSGEHPANFSLGPVDLN 167 (218)
T ss_dssp ECCCEEEEEECSSCCCEEEESS---CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS-EEECSSSEEEECCSCCGG
T ss_pred ecCCEEEEEcCcccCCEEEeCC---CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc-ccCCCccCEEEEccCCcc
Confidence 3466777642 34343332 236889999999997667777899999999876542 222223457999999999
Q ss_pred CCEEEEEEEEcCCC-----ceeeeEEEEEEe
Q psy14886 153 DSGIYSCTATNVHG-----MDESKGRLIVLH 178 (505)
Q Consensus 153 d~G~y~C~~~~~~g-----~~~~~~~l~v~~ 178 (505)
|+|.|+|.|.+... ..+..+.|.|..
T Consensus 168 D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 168 VSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp GCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred cCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 99999999997532 222335566643
No 176
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=165.87 Aligned_cols=156 Identities=17% Similarity=0.234 Sum_probs=103.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce--Eee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR--YSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~--~~~ 78 (505)
|.+|++++|.|.+.+.|. .+.|+|++..+..... ..+....++.|.|.+++ .+|+|.|+|.+.|..+.. ...
T Consensus 16 v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~----~~~~~~~~~~L~i~~v~-~~D~G~Y~C~a~n~~g~~~~s~~ 89 (196)
T 2d3v_A 16 ISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ----NPLEPKNKARFSIPSMT-EHHAGRYRCYYYSPAGWSEPSDP 89 (196)
T ss_dssp EETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE----CCCSSTTEEEEEESSCC-GGGCEEEEEEEEETTEECBCCCC
T ss_pred ccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc----cccCCccccEEEeccCC-hhHCeEEEEEEeCCCCcCCcCcc
Confidence 468999999999988665 9999999987652100 00001124689999999 999999999998876533 234
Q ss_pred EEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcE-EEe----eCCCEEEcCCCC
Q psy14886 79 AQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIF----ENGNLLISPVSR 151 (505)
Q Consensus 79 ~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~-~~~----~~~~l~i~~v~~ 151 (505)
+.|.|... +|.+...+ ...+.+|++++|.|.+.+.| +.+.|+|+|..+...... ... ..+.|.|.+++.
T Consensus 90 ~~l~V~~~~~~p~i~~~~---~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 165 (196)
T 2d3v_A 90 LELVVTGFYNKPTLSALP---SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTP 165 (196)
T ss_dssp EEEEEECSSCCCEEEC--------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBT
T ss_pred EEEEecCCCCCCeEEccC---CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCc
Confidence 67777753 34443332 24688999999999999988 899999999876432111 111 124699999999
Q ss_pred CCCEEEEEEEEcCCC
Q psy14886 152 DDSGIYSCTATNVHG 166 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g 166 (505)
+|+|.|+|.|.|..+
T Consensus 166 ~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 166 SHRWMLRCYGSRRHI 180 (196)
T ss_dssp TBCEEEEEEEEETTE
T ss_pred ccCeeEEEEEEccCC
Confidence 999999999998654
No 177
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.85 E-value=1.8e-19 Score=154.34 Aligned_cols=171 Identities=22% Similarity=0.268 Sum_probs=134.9
Q ss_pred EeeCCCeEEEEeecCCC-CCCeEEEEECCEEecCCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 100 YAGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~-p~~~i~W~~~g~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
....++.+.|.|.+.+. |.+.+.|+++|..+....++.+...+ .|.|.++..+|+|.|+|.+.|..+.....+.+.
T Consensus 13 l~c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 13 IQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp EEECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred EEEcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 34578889999999886 57899999999999877776665444 399999999999999999999888777666665
Q ss_pred EEe--------------------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCe
Q psy14886 176 VLH--------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235 (505)
Q Consensus 176 v~~--------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 235 (505)
+.. .|......+....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... ..
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~~~~~~-----~~ 165 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPP--EVSWLKNEKALAQTDH-----CN 165 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCC--EEEEEETTEEECCCSS-----EE
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCc--eEEEEECCeECccCCC-----EE
Confidence 532 44555555556788899999999999988766 4679999998875421 11
Q ss_pred eeec---CCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 236 INID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 236 ~~~~---~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
.... ...|.|..+..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 166 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 166 LKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 1111 23899999999999999999999999998888888864
No 178
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.85 E-value=4e-20 Score=171.59 Aligned_cols=264 Identities=18% Similarity=0.134 Sum_probs=152.9
Q ss_pred ceEEeeCCCeEEEEeecCCCCC-----------CeEEEEECCE------Eec--CCCcEEEeeCCCEEEcCCCCCCCEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPK-----------PKFVWKKDGN------IIG--SGGRRKIFENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~-----------~~i~W~~~g~------~~~--~~~~~~~~~~~~l~i~~v~~~d~G~y 157 (505)
..+.+.+|+.+.|.|.+.+.|. +.+.|++++. .+. .........++.|.|.+++.+|+|.|
T Consensus 15 ~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 94 (349)
T 4dep_C 15 RQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNY 94 (349)
T ss_dssp CCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEE
T ss_pred eeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEE
Confidence 3467899999999999998664 8999999873 221 11222234467899999999999999
Q ss_pred EEEEEcCCCceeeeEEEEEEeCCeeeeeC---CCceEEEeeccEEEEEEe-----eecCCCCeEEEEEeCCEEecCCCCC
Q psy14886 158 SCTATNVHGMDESKGRLIVLHGPSYYEQL---PPKITIAAHRNLQLRCSA-----HTEELLDVAYIWTHNGVRIGNMDLN 229 (505)
Q Consensus 158 ~C~~~~~~g~~~~~~~l~v~~~p~~~~~~---~~~~~~~~g~~~~l~C~~-----~~~~~~~~~~~w~~~~~~~~~~~~~ 229 (505)
+|.|.|..+.....+.|.|..++...... +....+..|+.+.|.|.+ .+.|. ..+.|++++..+...
T Consensus 95 ~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~--~~v~W~k~~~~l~~~--- 169 (349)
T 4dep_C 95 TCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVK--PTITWYMGCYKIQNF--- 169 (349)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSC--CEEEEEETTEECCSC---
T ss_pred EEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCC--ceEEEeeCCEECCCc---
Confidence 99999998888888889887755432211 224456789999999975 44444 467799999987542
Q ss_pred cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecC-CcE---EEEEEEEEcCCCC---CCCce-----EE-EEEeCCeEE
Q psy14886 230 ELETPNINIDGGLLEITNASFADAGEYECVVKSTV-GKI---STKTTVIVEGPPG---LPGGV-----QV-VEVHKTSAT 296 (505)
Q Consensus 230 ~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~-g~~---~~~~~l~v~~~p~---~p~~~-----~~-~~~~~~~v~ 296 (505)
......+..|.|.++..+|.|.|+|.|.|.. |.. +..+.|.+..++. +|... .+ ....+..+.
T Consensus 170 ----~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~ 245 (349)
T 4dep_C 170 ----NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELL 245 (349)
T ss_dssp ----SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------C
T ss_pred ----cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEE
Confidence 2334455789999999999999999999987 554 5667777765432 22111 10 223445566
Q ss_pred EEeecCCC-CCCCCceEEEEEEeCCCCCeEEeeeccccceeeee---c---CceeeEEeeeccCCce-eEEEEEEEcCCC
Q psy14886 297 IQWTDGAT-NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY---T---GRKEASIENVLVPWST-YEFKVIAGNELG 368 (505)
Q Consensus 297 l~w~~~~~-~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~---~---~~~~~~~~~~L~~~~~-y~~~v~a~n~~G 368 (505)
|.|..... .+.|...+.|.. .+... ............... . ....+.+.+ +...+. +.|+|.|.|..|
T Consensus 246 l~C~~~~~~~g~p~p~v~W~~--~g~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~~G~Y~C~a~N~~G 321 (349)
T 4dep_C 246 IPCTVYFSFLMDSRNEVWWTI--DGKKP-DDITIDVTINESISHSRTEDETRTQILSIKK-VTSEDLKRSYVCHARSAKG 321 (349)
T ss_dssp CCEEEEECCCTTCCCEEEEES--SCC---------CCCCEEEECCTTCCEEEEECC--------------CEEEEECSSC
T ss_pred EEEEEEEccCCCCCCEEEEEE--CCEEc-cccCCccccccceeeecCCCcEEEEEEEEee-ccHHHcCCcEEEEEEcCCC
Confidence 66664311 012223333321 11100 000000000000000 0 112244444 888888 999999999999
Q ss_pred cCCCC
Q psy14886 369 YGEPS 373 (505)
Q Consensus 369 ~~~~s 373 (505)
....+
T Consensus 322 ~~~~~ 326 (349)
T 4dep_C 322 EVAKA 326 (349)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 87543
No 179
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.85 E-value=1.7e-19 Score=154.72 Aligned_cols=184 Identities=23% Similarity=0.330 Sum_probs=143.4
Q ss_pred CCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeee--ecCCeEEEecCCCCCCEEEEEEEEec
Q psy14886 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN--IDGGLLEITNASFADAGEYECVVKST 263 (505)
Q Consensus 186 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~~~g~y~C~~~n~ 263 (505)
.+....+..|+.+.|.|.+.+.|.+ .+.|+++|..+....... .... .....|.|..+..+|.|.|+|.|.|.
T Consensus 24 ~p~~~~~~~G~~v~l~C~~~g~p~p--~i~W~~~g~~l~~~~~~~---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 98 (215)
T 3mtr_A 24 GPVAVYTWEGNQVNITCEVFAYPSA--TISWFRDGQLLPSSNYSN---IKIYNTPSASYLEVTPDSENDFGNYNCTAVNR 98 (215)
T ss_dssp CCSEEEECTTCCEEEEEEEEEESCC--EEEEEETTEESSCSSSCS---EEEEEETTEEEEEECCCSGGGCEEEEEEEECS
T ss_pred CCceEEEECCCCEEEEEEEeecCCC--EEEEEECCeECCCCCCcc---EEEecCCCeeEEEEecCChhhCeEEEEEEEEC
Confidence 3455778899999999999998876 567999999886542111 1111 12468999999999999999999999
Q ss_pred CCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCC-CCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCc
Q psy14886 264 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 342 (505)
Q Consensus 264 ~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~-~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 342 (505)
.|.....+.+.+..+|.+|..+.+ .....++.|+|.++. +++.++..|.|+++..+...|......... ....
T Consensus 99 ~g~~~~~~~l~v~~~P~~p~~~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~-----~~~~ 172 (215)
T 3mtr_A 99 IGQESLEFILVQADTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKE-----ASME 172 (215)
T ss_dssp SCEEEEEEEEEECCCCCCCEEEEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHH-----HHHH
T ss_pred CCceEEEEEEEECCCCCCCcceEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccccc-----cccc
Confidence 999999999999999999987776 467789999999776 567789999999999988889875432210 0011
Q ss_pred eeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCC
Q psy14886 343 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 382 (505)
Q Consensus 343 ~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~ 382 (505)
..+.+.+ |.+++.|.|+|.|.|.+|.+.+|... .+.|.
T Consensus 173 ~~l~i~~-L~~~~~y~~~~~A~N~~G~s~~S~~~-~v~T~ 210 (215)
T 3mtr_A 173 GIVTIVG-LKPETTYAVRLAALNGKGLGEISAAS-EFKTQ 210 (215)
T ss_dssp TEEEEEC-CCTTCEEEEEEEEEESSCBCCCCCCE-EEECC
T ss_pred ccEEECC-CCCCCEEEEEEEEEeCCcccCcccce-eeEec
Confidence 3455555 99999999999999999999988765 45543
No 180
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.85 E-value=3.7e-20 Score=159.29 Aligned_cols=189 Identities=23% Similarity=0.425 Sum_probs=138.0
Q ss_pred ecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC---CcEEEeeCCCE----EEcCCCCCCCEEE
Q psy14886 85 TLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNL----LISPVSRDDSGIY 157 (505)
Q Consensus 85 ~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~---~~~~~~~~~~l----~i~~v~~~d~G~y 157 (505)
..+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|+++|..+... .......++.+ .|.+++..|+|.|
T Consensus 7 ~~~P~i~~~p--~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 7 YQSPRIIEHP--TDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCCEEEECC--CCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred cCCCEEecCC--CceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 3466666554 4577899999999999999898999999999988653 22222334444 5778899999999
Q ss_pred EEEEEcCCCceee-eEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEe-eecCCCCeEEEEEeCCEEecCCCCCc--ccC
Q psy14886 158 SCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNE--LET 233 (505)
Q Consensus 158 ~C~~~~~~g~~~~-~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~~~w~~~~~~~~~~~~~~--~~~ 233 (505)
+|.+.|..|.... .+.+.|...++.....+....+..|+.+.|.|.+ .+.|.+ .+.|++++..+....... ...
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~--~v~W~~~g~~~~~~~~~~~~~~~ 162 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEP--TLIWIKDGVPLDDLKAMSFGASS 162 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCC--EEEEEETTEEECCCCCC---CCC
T ss_pred EEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCC--eEEEEECCcCCCcccccccccCC
Confidence 9999998876643 4667776544433344556778899999999998 777665 577999999886432111 011
Q ss_pred CeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 234 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 234 ~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
.......+.|.|..+..+|.|.|+|.|.|..|....+..+.+..
T Consensus 163 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 163 RVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp SEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred cEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 22233556899999999999999999999999887766555543
No 181
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.84 E-value=5.3e-21 Score=162.51 Aligned_cols=165 Identities=14% Similarity=0.136 Sum_probs=119.2
Q ss_pred CCCCCceEEEEEEeccCC-----CeEEEEECCEECcCCCCCCCCCCcEEEE-------CCeEEEEcCCCCCCCeEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPD-----VTYSWFRNGELLNSETLPLEDQDRYFIQ-------DNVLTIRYLNPERDPAMYQCRA 68 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~-----~~~~W~~~~~~l~~~~~~~~~~~~~~~~-------~~~L~i~~~~~~~d~G~Y~C~~ 68 (505)
+.+|++++|.|.+.+.|. +.+.|+|++..+.. ..+++.+. ..+|.|.+++ .+|+|.|+|.+
T Consensus 14 v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~------~~~r~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~ 86 (202)
T 3bp6_B 14 VDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSL------QSERATLLEEQLPLGKALFHIPSVQ-VRDSGQYRCLV 86 (202)
T ss_dssp EETTSCEEEEEEECTTC---CTTEEEEEEECC--CCC------BCSSCEECGGGGGGTEEEEEECSCC-GGGCEEEEEEE
T ss_pred EeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccc------cCCceEEeeccccCCeeEEEECCCC-HHHCcEEEEEE
Confidence 358999999999988775 89999994433321 23344432 2689999999 99999999999
Q ss_pred EcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCC---CEE
Q psy14886 69 KNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLL 145 (505)
Q Consensus 69 ~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~---~l~ 145 (505)
.+..+.....+.|.|... +.. +......+.+|+.+.|.|.+.|.|.+.+.|++++..+.. ......++ .+.
T Consensus 87 ~~~~~~~~~~~~l~V~~~-~~~---p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~ 160 (202)
T 3bp6_B 87 ICGAAWDYKYLTVKVKAS-YMR---IDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTS 160 (202)
T ss_dssp EETTEEEEEEEEEEEEBC-CCC---EEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEE
T ss_pred EeCCCcceEEEEEEecCC-CCc---ccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEE
Confidence 998877777788888752 211 100112457899999999999999999999998765421 11122222 255
Q ss_pred EcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe
Q psy14886 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178 (505)
Q Consensus 146 i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~ 178 (505)
+..+...|.|.|+|.|.|..|.....+.|.|..
T Consensus 161 i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 161 VLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp EEEECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred EEEEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 668889999999999999999988888777643
No 182
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.84 E-value=6e-19 Score=164.88 Aligned_cols=218 Identities=13% Similarity=0.082 Sum_probs=159.8
Q ss_pred cCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEe
Q psy14886 239 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 318 (505)
Q Consensus 239 ~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~ 318 (505)
....+.+..+.....+.|+..|.|..|..... ...+...+.+|.++.+......++.|+|+++. +..+.+|.|+++.
T Consensus 56 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~-~~~~~~~~~~p~~l~~~~~~~~si~l~W~~p~--~~~~~~Y~v~~~~ 132 (368)
T 1fnf_A 56 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPI-SDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSP 132 (368)
T ss_dssp TCCEEECCCCCTTSCEEEEEEEEETTEECCCE-EEEECCCCCCCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEE
T ss_pred CcCEEEECCCCCCCEEEEEEEEEcCCCccCce-eeeecCCCcCCceeEEEEcCCCeEEEEeeCCC--CCCCcEEEEEEEE
Confidence 34577888888888899999999988754322 23333344477888888889999999999884 3668999999998
Q ss_pred CCC-CCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeec
Q psy14886 319 NWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 397 (505)
Q Consensus 319 ~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~ 397 (505)
... ..|....... ....+.+.+ |.+++.|.|+|.|.|..|.+.+... ....++.+|.++.+..
T Consensus 133 ~~~~~~~~~~~~~~---------~~~~~~i~~-L~p~t~Y~~~V~a~~~~g~s~~~~~------~~~~~~~~P~~l~~~~ 196 (368)
T 1fnf_A 133 VKNEEDVAELSISP---------SDNAVVLTN-LLPGTEYVVSVSSVYEQHESTPLRG------RQKTGLDSPTGIDFSD 196 (368)
T ss_dssp TTCTTCCEEEEECT---------TCCEEEECS-CCTTCEEEEEEEEEETTEECCCEEE------EEECCCCCCEEEEEES
T ss_pred CCCCCccEEEEcCC---------CcceEEecC-CCCCCEEEEEEEEEeCCCCCCCeEe------eecCCCCCCCccEEEE
Confidence 654 3455432211 223444444 9999999999999999998764321 1233455788999988
Q ss_pred cccccEEEEEEeCCccccCCCCceEEEEEEEcCC-CCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCC
Q psy14886 398 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 476 (505)
Q Consensus 398 ~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~ 476 (505)
...+++.|.|+++ .+.+.+|+|+|+..+. ..+....... ....+.|.+|.|++.|.|+|.|+|..|.|++
T Consensus 197 ~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~ 267 (368)
T 1fnf_A 197 ITANSFTVHWIAP-----RATITGYRIRHHPEHFSGRPREDRVPH----SRNSITLTNLTPGTEYVVSIVALNGREESPL 267 (368)
T ss_dssp CCSSEEEEEEECC-----SSCCSEEEEEEECSCCSSCCEEEEEET----TCCEEEEESCCTTCEEEEEEEEEETTEECCC
T ss_pred ccCCEEEEEEeCC-----CCCcCEEEEEEecCCCCCCccEEEeCC----CcCEEEECCCCCCCEEEEEEEEEeCCccCCc
Confidence 8899999999983 2679999999998763 3444333322 3457888999999999999999999999998
Q ss_pred CceEEEeec
Q psy14886 477 SEVVTIWHD 485 (505)
Q Consensus 477 s~~~~~~t~ 485 (505)
+... ..+.
T Consensus 268 ~~~~-~~t~ 275 (368)
T 1fnf_A 268 LIGQ-QSTV 275 (368)
T ss_dssp EEEE-EECC
T ss_pred cccc-ccCC
Confidence 7543 3443
No 183
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.84 E-value=9.5e-21 Score=175.03 Aligned_cols=275 Identities=17% Similarity=0.221 Sum_probs=173.4
Q ss_pred CCccCCCCCceEEeeCCCeEEEEeecC-------CCCCCeEEEEECCEEe--cCC-CcEEEeeCCCEEEcCCCCCCCEEE
Q psy14886 88 PSFKKRPLESETYAGEGGNVTIFCNPE-------AAPKPKFVWKKDGNII--GSG-GRRKIFENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 88 p~~~~~~~~~~~~v~~g~~v~l~C~~~-------~~p~~~i~W~~~g~~~--~~~-~~~~~~~~~~l~i~~v~~~d~G~y 157 (505)
|.+...+ ....+.+|+++.|.|.+. +.|.+.+.|+++|..+ ... .......++.|.|.+++.+|+|.|
T Consensus 19 p~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 96 (339)
T 3o4o_C 19 RFRGRHY--KREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTY 96 (339)
T ss_dssp EEEEECS--CCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEE
T ss_pred HhhCcCc--eEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEE
Confidence 4444443 456789999999999998 8888999999999873 322 222334577899999999999999
Q ss_pred EEEEEcCCCceeeeEEEEEEeCCeeee-eCCCceEEEeeccEEEEEE-----eeecCCCCeEEEEEeCCEEecCCCCCcc
Q psy14886 158 SCTATNVHGMDESKGRLIVLHGPSYYE-QLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGNMDLNEL 231 (505)
Q Consensus 158 ~C~~~~~~g~~~~~~~l~v~~~p~~~~-~~~~~~~~~~g~~~~l~C~-----~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 231 (505)
+|.+.|..|.....+.|.|...+.... .......+..|+.+.|.|. +.+.|.+ .+.|++++..+.....
T Consensus 97 ~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~--~v~W~k~g~~~~~~~~--- 171 (339)
T 3o4o_C 97 VCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV--KIQWYKDSLLLDKDNE--- 171 (339)
T ss_dssp ECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCC--CBCCEESSCBCCTTCS---
T ss_pred EEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCc--eEEEecCCeeCCCCCc---
Confidence 999999988888888898877654321 1122346788999999999 6666655 4569999887754321
Q ss_pred cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCC----cEEEEEEEEEcCCCC--CCCce----EEEEEeCCeEEEEeec
Q psy14886 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPG--LPGGV----QVVEVHKTSATIQWTD 301 (505)
Q Consensus 232 ~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g----~~~~~~~l~v~~~p~--~p~~~----~~~~~~~~~v~l~w~~ 301 (505)
..........|.|..+..+|.|.|+|.|.|..| .....+.|.|...+. +|... ......+..+.|.|..
T Consensus 172 -~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~ 250 (339)
T 3o4o_C 172 -KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKV 250 (339)
T ss_dssp -SEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCE
T ss_pred -eeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEE
Confidence 111112235899999999999999999999887 356677888865431 22111 1112345667777764
Q ss_pred CCCCCCC-CceEEEEEEeCCCC-CeEEeeeccccceeeeecCce------eeEEeeeccCCce-eEEEEEEEcCCCcCCC
Q psy14886 302 GATNGRP-ITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRK------EASIENVLVPWST-YEFKVIAGNELGYGEP 372 (505)
Q Consensus 302 ~~~~~~~-i~~y~v~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~------~~~~~~~L~~~~~-y~~~v~a~n~~G~~~~ 372 (505)
....+.| ...+.+.. .+.. ........+............ .+.+.. +...+. +.|+|.|.|..|....
T Consensus 251 ~~~~g~P~~~~v~W~~--~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~-v~~~d~~G~Y~C~a~N~~G~~~~ 327 (339)
T 3o4o_C 251 FLGTGTPLTTMLWWTA--NDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDP-VTREDLHMDFKCVVHNTLSFQTL 327 (339)
T ss_dssp EESSSCCSSCEEEEES--SSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECS-SCCCSCCCCCEEEEEETTEEECC
T ss_pred ECCCCCCCCceEEEEE--CCeecccccccccceecceEEecccCceEEEEEEEEEE-echhhcCccEEEEEEeccCceEE
Confidence 2112333 23233321 1110 000000000000000000111 344444 888887 9999999999998764
Q ss_pred C
Q psy14886 373 S 373 (505)
Q Consensus 373 s 373 (505)
.
T Consensus 328 ~ 328 (339)
T 3o4o_C 328 R 328 (339)
T ss_dssp B
T ss_pred E
Confidence 3
No 184
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.84 E-value=1.6e-19 Score=162.76 Aligned_cols=257 Identities=13% Similarity=0.098 Sum_probs=165.2
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCC
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 166 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g 166 (505)
+|.+... .....+.+|++++|.|.+.+ .+.|++++..+ ......+..|.|.++..+|+|.|+|.+.| |
T Consensus 12 ~P~i~~~--~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g 79 (290)
T 2o26_X 12 PPSIHPA--QSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN----EMVENKKNEWIQEKAEATRTGTYTCSNSN--G 79 (290)
T ss_dssp CCEESSC--SSEEEEETTSCEEEEEECTT----EEEEEEECSSS----CEEEECSSEEEETTCCGGGCEEEEEEESS--S
T ss_pred CCEEeCC--CCeEEEcCCCcEEEEECCCC----cEEEecCCcce----eeecCCCceEEEeccCHHhCeEEEEEeeC--C
Confidence 4555543 46678999999999999987 89999998766 22223347799999999999999999998 4
Q ss_pred ceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEE-EeCCEEecCCCCCcccCCeeeecCCeEEE
Q psy14886 167 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW-THNGVRIGNMDLNELETPNINIDGGLLEI 245 (505)
Q Consensus 167 ~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 245 (505)
. ...+.|.|..+|... ..+....+..|+.+.|.|.+.+ |. ...+.| .++|..+.... .........|.|
T Consensus 80 ~-~~~~~l~V~~~~~~~-~~~~~~~~~~g~~v~l~C~~~~-p~-~~~v~W~~~~g~~l~~~~------~~~~~~~~~L~i 149 (290)
T 2o26_X 80 L-TSSIYVFVRDPAKLF-LVGLPLFGKEDSDALVRCPLTD-PQ-VSQYSLIECDGKSLPTDL------TFVPNPKAGITI 149 (290)
T ss_dssp C-EEEEEEEEECSSCCB-CCCCCEEEETTSCEEECCCBSC-CS-CEEEEEEETTSCCCCTTC------EEEEETTTEEEE
T ss_pred c-cEEEEEEEeCCCccc-ccccceEEecCCeEEEeCcCCC-CC-CceEEEEeCCCcCCCCCC------ceeeCCCCCEEE
Confidence 4 666888888776665 4455677889999999999984 43 257779 46776654321 112233468999
Q ss_pred ecCCCCCCE-EEEEEEEecCCcEE-EEEEEEEcCCCCCCCceE-----EEEEeCCeEEEEeecCCCCCCCCc-eEEEEEE
Q psy14886 246 TNASFADAG-EYECVVKSTVGKIS-TKTTVIVEGPPGLPGGVQ-----VVEVHKTSATIQWTDGATNGRPIT-HYKIIAR 317 (505)
Q Consensus 246 ~~~~~~~~g-~y~C~~~n~~g~~~-~~~~l~v~~~p~~p~~~~-----~~~~~~~~v~l~w~~~~~~~~~i~-~y~v~~~ 317 (505)
..+..+|.| .|+|.|.|..+... ..+.+.|...+..+..+. .....+..+.|.|... +.|.. .+.|...
T Consensus 150 ~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~---g~p~p~~i~W~~~ 226 (290)
T 2o26_X 150 KNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIK---DVSTSVNSMWLKM 226 (290)
T ss_dssp ESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEE---ESSTTCEEEEEEE
T ss_pred ecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEe---cCCcceeEEEecC
Confidence 999999999 99999999865533 347777763221111111 1234566788888743 22222 2443332
Q ss_pred eCCCC--CeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 318 TNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 318 ~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
..... .-........ ..........+.+.+ +...+.+.|+|.|.|..|...
T Consensus 227 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~I~~-v~~~d~G~Y~C~a~N~~g~~~ 279 (290)
T 2o26_X 227 NPQPQHIAQVKHNSWHR--GDFNYERQETLTISS-ARVDDSGVFMCYANNTFGSAN 279 (290)
T ss_dssp SSSEEECCCEECCEEEE--ETTEEEEEEEEEESS-CCSSSCEEEEEEEECSSCEEE
T ss_pred CCCCccceeeccccccc--CceeeEEEEEEEEcC-CCcccCeEEEEEEeCCCCcEE
Confidence 21100 0000000000 000111223444444 889999999999999998763
No 185
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.84 E-value=9.5e-20 Score=152.98 Aligned_cols=169 Identities=20% Similarity=0.302 Sum_probs=131.0
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEE-CCEEecCCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEcCCCce-eee
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMD-ESK 171 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~-~g~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~g~~-~~~ 171 (505)
....+.+|+++.|.|.+.+.|. .+.|++ ++..+....+.....++ .|.|.++..+|+|.|+|.+.+..|.. ...
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~ 88 (189)
T 2v44_A 10 SKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEAT 88 (189)
T ss_dssp SEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEE
T ss_pred CceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEE
Confidence 4567899999999999988877 999999 78877777777666555 79999999999999999999998876 455
Q ss_pred EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCC
Q psy14886 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 251 (505)
Q Consensus 172 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 251 (505)
+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... .......+..|.|..+..+
T Consensus 89 ~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~~~~~~----~~~~~~~~~~L~i~~v~~~ 161 (189)
T 2v44_A 89 VVLEIYQKLTFRE-VVSPQEFKQGEDAEVVCRVSSSPAP--AVSWLYHNEEVTTISD----NRFAMLANNNLQILNINKS 161 (189)
T ss_dssp EEEEEECCCEEES-CCCSEEEETTSCEEECCEEECSSCC--EEEEEEEC--CEECCC----TTEEECTTSCEEETTCCGG
T ss_pred EEEEEecCCceee-cCCcEEEeCCCCEEEEEEECcCCCC--cEEEEECCcEEeccCC----CCEEEecCCcEEEEEcCcc
Confidence 7888877776543 3445678899999999999988766 5679998877643110 1222334568999999999
Q ss_pred CCEEEEEEEEecCCcEEEEEEE
Q psy14886 252 DAGEYECVVKSTVGKISTKTTV 273 (505)
Q Consensus 252 ~~g~y~C~~~n~~g~~~~~~~l 273 (505)
|.|.|+|.|.|..|.......+
T Consensus 162 d~G~Y~C~a~n~~~~~~~~~~~ 183 (189)
T 2v44_A 162 DEGIYRCEGRVEARGEIDFRDI 183 (189)
T ss_dssp GCEEEEEEEEETTTTEEEEEEE
T ss_pred cCeEEEEEEEccccCceeeeeE
Confidence 9999999999998775544333
No 186
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.84 E-value=5.1e-21 Score=159.70 Aligned_cols=146 Identities=19% Similarity=0.276 Sum_probs=111.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce--Eee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR--YSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~--~~~ 78 (505)
|.+|++++|.|.+.+ +.+.+.|+|++... ...++.|.|.+++ .+|+|.|+|.+.|..+.. ...
T Consensus 19 v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-------------~~~~~~L~i~~v~-~~D~G~Y~C~a~n~~g~~~~s~~ 83 (184)
T 2gi7_A 19 VPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-------------YQDQAVLFIPAMK-RSLAGRYRCSYQNGSLWSLPSDQ 83 (184)
T ss_dssp EETTCCEEEEEECST-TCSEEEEEETTTCC-------------EESSSEEEESSCC-GGGCEEEEEEEEETTEEBCCCCC
T ss_pred ccCCCcEEEEEeCCC-CCCEEEEEECCccc-------------cCcccEEEECcCC-hhhCceEEEEEEcCCCccCCCCC
Confidence 468999999999987 77899999998641 2346799999999 999999999999876532 234
Q ss_pred EEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEE
Q psy14886 79 AQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 156 (505)
Q Consensus 79 ~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 156 (505)
+.|.|... +|.+...+ ...+.+|++++|.|.+.+.+ +.+.|+++|..+..... .....+.|.|.+++.+|+|.
T Consensus 84 ~~l~V~~~~~~p~i~~~p---~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~-~~~~~~~L~i~~v~~~D~G~ 158 (184)
T 2gi7_A 84 LELVATGVFAKPSLSAQP---GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNP-ERWYRASFPIITVTAAHSGT 158 (184)
T ss_dssp EEEEEESSSCCCEEEEEC---CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCC-CEEEEESSSEEEETTCCSEE
T ss_pred EEEEecCcCCCCEEEeCC---CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceec-CCCceEEEEEccCCccCCeE
Confidence 66777542 33343332 23477999999999987664 69999999987754322 22345679999999999999
Q ss_pred EEEEEEcCCC
Q psy14886 157 YSCTATNVHG 166 (505)
Q Consensus 157 y~C~~~~~~g 166 (505)
|+|.|.|..+
T Consensus 159 Y~C~a~n~~~ 168 (184)
T 2gi7_A 159 YRCYSFSSRD 168 (184)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 9999999754
No 187
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.84 E-value=2e-20 Score=166.71 Aligned_cols=188 Identities=15% Similarity=0.207 Sum_probs=121.0
Q ss_pred CCCCCceEEEEEEe---ccCCCeEEEEECCEECcCCCC-----------CCCCCCcEEEEC------CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAF---GVPDVTYSWFRNGELLNSETL-----------PLEDQDRYFIQD------NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~---~~p~~~~~W~~~~~~l~~~~~-----------~~~~~~~~~~~~------~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+. +.+.+.|.|+|++........ .....+|+.+.. .+|.|.+++ .+|
T Consensus 17 v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~D 95 (268)
T 3mj6_A 17 VHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQ-KAD 95 (268)
T ss_dssp EETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCC-GGG
T ss_pred EecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCC-HhH
Confidence 35899999999997 567788999996543221100 000124555432 789999999 999
Q ss_pred CeEEEEEEEcccCceEe--eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec---CCCCCCeEEEEEC-CEEecC--
Q psy14886 61 PAMYQCRAKNQLKTRYS--SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP---EAAPKPKFVWKKD-GNIIGS-- 132 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~~~--~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~---~~~p~~~i~W~~~-g~~~~~-- 132 (505)
+|.|+|.+.+..+.... .+.|.|... .+....+.+|++++|.|.+ .+.|.+.+.|+++ +.....
T Consensus 96 ~G~Y~C~~~~~~~~~~~~~~~~l~V~~~--------~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~ 167 (268)
T 3mj6_A 96 EGIYTCEIRLKNESMVMKKPVELWVLPE--------EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEET 167 (268)
T ss_dssp CEEEEEEEEETTCCCEEEEEEEEEEECC--------CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEE
T ss_pred CEEEEEEEEecCCcceEEEEEEEEEecc--------CCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCccee
Confidence 99999999986554433 344544421 1235678999999999999 6778899999993 321110
Q ss_pred -------------------CCcEEE-----eeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCC
Q psy14886 133 -------------------GGRRKI-----FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP 188 (505)
Q Consensus 133 -------------------~~~~~~-----~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~ 188 (505)
..+..+ ..++.|.|.++..+|+|.|+|.|.|..|.....+.|.|...++.....+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~p~ 247 (268)
T 3mj6_A 168 VLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTISPT 247 (268)
T ss_dssp EEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC---------
T ss_pred EEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCeeeeCCC
Confidence 012222 23457999999999999999999999888888888988665555444444
Q ss_pred ceEEEeecc
Q psy14886 189 KITIAAHRN 197 (505)
Q Consensus 189 ~~~~~~g~~ 197 (505)
...+..++.
T Consensus 248 ~~~~~~~q~ 256 (268)
T 3mj6_A 248 PPTDKGQQG 256 (268)
T ss_dssp ---------
T ss_pred CCCCCccee
Confidence 444444443
No 188
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.84 E-value=1e-21 Score=181.69 Aligned_cols=167 Identities=17% Similarity=0.183 Sum_probs=130.9
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCe-EEEEEEEcccCceEeeE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPA-MYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G-~Y~C~~~~~~~~~~~~~ 79 (505)
+.+|++++|.|.+.|.|.+.+.|++++..+..... .......++|.|.+++ .+|+| .|+|.|.|..|.....+
T Consensus 170 v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~-----~~~~~~~~~L~i~~v~-~~D~G~~Y~C~a~n~~g~~~~~~ 243 (347)
T 2ifg_A 170 VDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM-----KSGGLPSLGLTLANVT-SDLNRKNVTCWAENDVGRAEVSV 243 (347)
T ss_dssp CBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC-----CCCCSSEEEEEEESCC-STTTTCCEEECCEETTEECCEEE
T ss_pred EeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc-----cceecccceEEEeeCC-hHHCCCeEEEEEEcCCCCEEEEE
Confidence 56899999999999999999999999876542110 0011234689999999 99999 99999999888777777
Q ss_pred EEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe----------eCCCEEEcCC
Q psy14886 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF----------ENGNLLISPV 149 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~----------~~~~l~i~~v 149 (505)
.|.|.. +|.+.. ....+|+.++|.|.+.|.|.|.+.|+++|..+......... ..++|.|.++
T Consensus 244 ~l~V~~-~P~i~~------~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 316 (347)
T 2ifg_A 244 QVNVSF-PASVQL------HTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQP 316 (347)
T ss_dssp CCCCBE-EEEEEE------CCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSC
T ss_pred EEEEcC-CCeeee------ccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCC
Confidence 777764 454311 12457899999999999999999999999998755443321 1345999999
Q ss_pred CCCCCEEEEEEEEcCCCceeeeEEEEEEeCC
Q psy14886 150 SRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180 (505)
Q Consensus 150 ~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p 180 (505)
..+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 317 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 317 THVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred CcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 9999999999999999998888888875543
No 189
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.84 E-value=2e-19 Score=154.65 Aligned_cols=162 Identities=21% Similarity=0.345 Sum_probs=130.5
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce-eeeEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD-ESKGRLI 175 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~-~~~~~l~ 175 (505)
....+.+|+++.|.|.+.+.|.+.+.|++++..+... ....|.|.++...|+|.|+|.+.+..+.. ...+.|.
T Consensus 26 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~ 99 (218)
T 3k0w_A 26 ESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG------NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLD 99 (218)
T ss_dssp CCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC------CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEE
T ss_pred CCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC------CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEE
Confidence 4567899999999999999999999999999988653 24579999999999999999999987765 3447787
Q ss_pred EEeCC--------------eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCC
Q psy14886 176 VLHGP--------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241 (505)
Q Consensus 176 v~~~p--------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (505)
|...+ +.+...+....+..|+.+.|.|.+.+.|.+ .+.|++++..+... ...
T Consensus 100 V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~--~v~W~~~~~~~~~~------------~~~ 165 (218)
T 3k0w_A 100 VCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIP--HYQWFKNELPLTHE------------TKK 165 (218)
T ss_dssp EECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCC--EEEEEETTEECTTC------------CSS
T ss_pred EEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCC--eEEEEECCEECCCC------------CCC
Confidence 76653 233334556778899999999999887765 57799999887653 235
Q ss_pred eEEEecCCCCCCEEEEEEEEecCCc-EEEEEEEEEcCC
Q psy14886 242 LLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVEGP 278 (505)
Q Consensus 242 ~l~i~~~~~~~~g~y~C~~~n~~g~-~~~~~~l~v~~~ 278 (505)
.|.|..+..+|.|.|+|.|.|..|. .+..+.|.|...
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 166 LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred EEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 7999999999999999999998887 556677877654
No 190
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.84 E-value=5.9e-19 Score=158.45 Aligned_cols=188 Identities=16% Similarity=0.146 Sum_probs=138.9
Q ss_pred EEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCC-CCCeEEeeeccccceeeeecCceeeEEeeecc
Q psy14886 274 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 352 (505)
Q Consensus 274 ~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 352 (505)
....+|.+|.++.+.....+++.|+|+++. +++.+|.|+|+... ...|...... .....+.+.+ |.
T Consensus 10 ~~~~~p~~P~~l~~~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~~~~~~~~~~---------~~~~~~~i~~-L~ 76 (283)
T 1tdq_A 10 GGIPVIDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGKTTFRLQ---------PPLSQYSVQA-LR 76 (283)
T ss_dssp --CCSSCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCCEEEEEC---------TTCSEEEECS-CC
T ss_pred ccccCCCCCcEEEEEecCCCeEEEEEECCC---CceeEEEEEEEEecCCCCcEEEEeC---------CCCCEEEecC-CC
Confidence 345688899999999999999999999886 56889999997654 3445332211 1233444544 99
Q ss_pred CCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC
Q psy14886 353 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 432 (505)
Q Consensus 353 ~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~ 432 (505)
+++.|.|+|.|.|..|.+.+... .+ ..++.+|.++.+...+.+++.|.|+++. +.+.+|.|+|+..++.
T Consensus 77 p~t~Y~~~V~a~~~~g~s~~~~~--~~----~t~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~ 145 (283)
T 1tdq_A 77 PGSRYEVSISAVRGTNESDASST--QF----TTEIDAPKNLRVGSRTATSLDLEWDNSE-----AEAQEYKVVYSTLAGE 145 (283)
T ss_dssp TTCEEEEEEEEEETTEECCCEEE--EE----ECCCCCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEETTCC
T ss_pred CCCEEEEEEEEECCCCCCCCeeE--EE----ECCCCCCCceEEEecCCCeEEEEecCCC-----CCccEEEEEEEeCCCC
Confidence 99999999999999888753221 22 2355678999998888999999999842 5799999999998876
Q ss_pred CcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 433 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
.|....+... ......+.|.+|.|++.|.|+|.|+|..|.|+++.. ...+.|+
T Consensus 146 ~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~-~~~t~~~ 198 (283)
T 1tdq_A 146 QYHEVLVPKG-IGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATM-NARTELD 198 (283)
T ss_dssp CCEEEEEECC-SSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEEE-EEECCCC
T ss_pred cceEEECCCC-CcccceEEEecCCCCCEEEEEEEEEeCCCCCcceEE-EecCCCC
Confidence 6654444321 011578899999999999999999999999876543 3444433
No 191
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.84 E-value=1.5e-20 Score=171.52 Aligned_cols=174 Identities=16% Similarity=0.275 Sum_probs=129.9
Q ss_pred CCCCCceEEEEEEe-ccCCCeEEEEECCEECcCCCC-CCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEe-
Q psy14886 1 MDNQADLTWTCEAF-GVPDVTYSWFRNGELLNSETL-PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS- 77 (505)
Q Consensus 1 v~~G~~~~l~C~~~-~~p~~~~~W~~~~~~l~~~~~-~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~- 77 (505)
+..|+.+.|.|.+. +.|.+.+.|++++..+..... .....+.+.. .+.|.|..++ .+|+|.|+|.|.|..+....
T Consensus 129 ~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~-~s~l~i~~~~-~~d~g~Y~C~a~n~~~~~~~~ 206 (313)
T 4fqp_A 129 LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTV-TSLWILVPSS-QVDGKNVTCKVEHESFEKPQL 206 (313)
T ss_dssp CCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEE-EEEEEECCCG-GGTTCEEEEEEECTTSSSCEE
T ss_pred eecCceEEEEEEccCccCCcEEEeecCCccccccceeeeeccccccc-ceeeeecccc-cccCeeEEEEEEccCcCccce
Confidence 35688889999875 688999999999876642210 0011222222 2468899999 99999999999997765433
Q ss_pred -eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCC-eEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCE
Q psy14886 78 -SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155 (505)
Q Consensus 78 -~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G 155 (505)
.+.|.|.. +|.+.+.+. ....+.+|+.++|.|.+.|.|.| .+.|+++|..+... ....+++|.|.++..+|+|
T Consensus 207 ~~~~l~V~~-~P~v~~~~~-~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~---~~~~~~~L~i~~v~~~d~G 281 (313)
T 4fqp_A 207 LTVNLTVYY-PPEVSISGY-DNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPF---AVAQGAQLLIRPVDKPINT 281 (313)
T ss_dssp EEEECCBCE-EEEEEEECC-CSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT---EEEETTEEEECCCSSCCEE
T ss_pred eeeeccccc-CCccccccc-cceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCc---eEEeCCEEEECcCChhhCE
Confidence 45555553 565544432 33456788999999999999988 79999999887543 2344678999999999999
Q ss_pred EEEEEEEcCCCceeeeEEEEEEeCCe
Q psy14886 156 IYSCTATNVHGMDESKGRLIVLHGPS 181 (505)
Q Consensus 156 ~y~C~~~~~~g~~~~~~~l~v~~~p~ 181 (505)
.|+|.|.|..|.....+.|.|.+.|+
T Consensus 282 ~Y~C~a~N~~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 282 TLICNVTNALGARQAELTVQVKEGPP 307 (313)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCC-
T ss_pred EEEEEEEeCCCcEEEEEEEEEEeCCC
Confidence 99999999999999999999987765
No 192
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.83 E-value=4.1e-20 Score=152.31 Aligned_cols=151 Identities=19% Similarity=0.284 Sum_probs=115.1
Q ss_pred CCCCCceEEEEEEeccC-CCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeE
Q psy14886 1 MDNQADLTWTCEAFGVP-DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSA 79 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~ 79 (505)
+.+|++++|.|.+.+.| .+.+.|+|++..+... ...+.+.+++ .+|+|.|+|.+.+... ...+
T Consensus 16 v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~-------------~~~~~~~~~~-~~d~G~Y~C~~~~~~~--s~~~ 79 (170)
T 3ry4_A 16 VLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH-------------TQPSYRFKAN-NNDSGEYTCQTGQTSL--SDPV 79 (170)
T ss_dssp EETTCEEEEEEESCCCSSSSCEEEEETTEECTTC-------------CSSEEEEECC-GGGCEEEEEEETTSBC--CCCE
T ss_pred EECCCcEEEEEEecCCCCcceEEEEECCeEcccC-------------ccceEEEecc-cccCeEEEEEEeCCCc--eEeE
Confidence 35899999999998876 6899999999988732 3457788999 9999999999986433 3356
Q ss_pred EEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEE
Q psy14886 80 QLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 158 (505)
Q Consensus 80 ~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~ 158 (505)
.|.|.. ++.+... +...+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ...++.|.|.++..+|+|.|+
T Consensus 80 ~l~v~~-~~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~-----~~~~~~L~i~~v~~~d~G~Y~ 150 (170)
T 3ry4_A 80 HLTVLF-EWLVLQT---PHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF-----SHLDPTFSIPQANHSHSGDYH 150 (170)
T ss_dssp EEEEEC-CSEEEEC---SCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE-----ESSCCEEEESSCCGGGCEEEE
T ss_pred EEEEEC-CceEecC---CCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc-----cCCCCeEEEEeccccCCEEEE
Confidence 777774 3322222 23457899999999999 4556689999999987642 123557999999999999999
Q ss_pred EEEEcCCCce-eeeEEEEE
Q psy14886 159 CTATNVHGMD-ESKGRLIV 176 (505)
Q Consensus 159 C~~~~~~g~~-~~~~~l~v 176 (505)
|.|.|..|.. +..+.|.|
T Consensus 151 C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 151 CTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEETTEEEECCCEEEEE
T ss_pred EEEEeCcCccccccEEEEE
Confidence 9999988863 33355554
No 193
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.83 E-value=2.7e-19 Score=150.52 Aligned_cols=172 Identities=18% Similarity=0.298 Sum_probs=130.8
Q ss_pred ceEEeeCCCeEEEEeecCCCC-CCeEEEEE-CCEEec-CCCcEEEee----CCCEEEcCCCCCCCEEEEEEEEcCCC-ce
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-KPKFVWKK-DGNIIG-SGGRRKIFE----NGNLLISPVSRDDSGIYSCTATNVHG-MD 168 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-~~~i~W~~-~g~~~~-~~~~~~~~~----~~~l~i~~v~~~d~G~y~C~~~~~~g-~~ 168 (505)
....+.+|+++.|.|.+.+.+ .+.+.|++ +|..+. ...++.... ...|.|.++..+|+|.|+|.+.+..+ ..
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~ 89 (191)
T 1epf_A 10 SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQS 89 (191)
T ss_dssp SSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEE
T ss_pred CCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcce
Confidence 446789999999999999876 78999999 888776 344444432 34699999999999999999999884 44
Q ss_pred eeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecC
Q psy14886 169 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 248 (505)
Q Consensus 169 ~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 248 (505)
...+.|.|..+|.+.. .+....+..|+.+.|.|.+.+.|.+ .+.|++++..+..... .......++.|.|..+
T Consensus 90 ~~~~~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~~----~~~~~~~~~~L~i~~~ 162 (191)
T 1epf_A 90 EATVNVKIFQKLMFKN-APTPQEFKEGEDAVIVCDVVSSLPP--TIIWKHKGRDVILKKD----VRFIVLSNNYLQIRGI 162 (191)
T ss_dssp EEEEEEEEECCSEEEE-CCSSEECCTTSCEEECCEEECSSCC--EEEEEETTEEGGGGCC----TTEEECTTSCEEETTC
T ss_pred EEEEEEEeecCceEec-CCCcEeecCCCeEEEEEEECCCCCC--EEEEEECCEEeeccCC----ceEEEecCCeEEECCC
Confidence 5557788876666544 3556677899999999999988765 5779999988754221 1222234568999999
Q ss_pred CCCCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 249 SFADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 249 ~~~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
..+|.|.|+|.|.|..+.......+.+
T Consensus 163 ~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 163 KKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp CGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred ChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 999999999999998876554444433
No 194
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.83 E-value=2.7e-19 Score=151.82 Aligned_cols=170 Identities=24% Similarity=0.338 Sum_probs=130.6
Q ss_pred ceEEeeCCCeEEEEee-cCCCCC-CeEEEEECCEEec--CCCc-EEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeee
Q psy14886 97 SETYAGEGGNVTIFCN-PEAAPK-PKFVWKKDGNIIG--SGGR-RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK 171 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~-~~~~p~-~~i~W~~~g~~~~--~~~~-~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~ 171 (505)
....+.+|+.+.|.|. +.+.|. +.+.|++++..+. ...+ .....+++|.|.++..+|+|.|+|.+.+..+.....
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 95 (201)
T 3s97_C 16 PEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVF 95 (201)
T ss_dssp CCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEE
T ss_pred ceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchh
Confidence 5577999999999999 888888 8999999987764 2222 233346789999999999999999999876555442
Q ss_pred ---EEEEEEe-------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCC
Q psy14886 172 ---GRLIVLH-------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG 241 (505)
Q Consensus 172 ---~~l~v~~-------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (505)
..+.+.. +|.+... .....+..|+.+.|.|.+.+.|.+ .+.|++++..+... ......+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~~~~-------~~~~~~~~ 165 (201)
T 3s97_C 96 SKFIPLIPIPERTTKPYPADIVVQ-FKDVYALMGQNVTLECFALGNPVP--DIRWRKVLEPMPST-------AEISTSGA 165 (201)
T ss_dssp CCCEEEEEECCSSCCCEEEEEEEE-CCCEEEETTCCEEEEEEEEEESCC--EEEEEETTBCCCTT-------CEEETTTT
T ss_pred hcccceeeccccccCCCCCceEec-CCceEEecCCcEEEEEEccCCCCC--ceEEEeCCCcCCCc-------eeecCCCC
Confidence 3333321 2333333 346778899999999999998765 56799998866432 33444567
Q ss_pred eEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 242 ~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
.|.|..+..+|.|.|+|.|.|..|.....+.|.|+
T Consensus 166 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 166 VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 89999999999999999999999999888888875
No 195
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.83 E-value=3.8e-20 Score=156.70 Aligned_cols=146 Identities=16% Similarity=0.340 Sum_probs=105.8
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEeeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSSAQ 80 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 80 (505)
+++|++++|.|.+ |.+.|.|+|+|..+... ...+++|.|.+++ .+|+|.|+|.+.+.. ...+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~----------~~~~~~L~i~~v~-~~DsG~Y~C~~~~~~---s~~~~ 77 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL----------TEDKKKWNLGSNA-KDPRGMYQCKGSQNK---SKPLQ 77 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE----------ESSCCCEEEEEGG-GCCEEEEEEESSSSC---CCCEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC----------CCCCCeEEeCCCC-cCCCEEEEEEecCCC---CeeEE
Confidence 4689999999998 78899999999987621 1135689999999 999999999975422 11234
Q ss_pred EEEEe--------------------------c----CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEe
Q psy14886 81 LRVLT--------------------------L----KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII 130 (505)
Q Consensus 81 l~v~~--------------------------~----~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~ 130 (505)
|.|.. . ++.+... +.....+|++++|.|. +.|.+.+.|+++|..+
T Consensus 78 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l 152 (204)
T 1sy6_A 78 VYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQT---PYKVSISGTTVILTCP--QYPGSEILWQHNDKNI 152 (204)
T ss_dssp EEEEC------------------------------------CC---CCEEEEETTEEEEECS--CCCSSCEEEEETTEEE
T ss_pred EEEEEeccccccccccccccccccccccccccccccccceecC---CceeeecCCcEEEEcC--CCCCCceEEEECCEEC
Confidence 44430 0 1111111 1222338999999999 6788899999999988
Q ss_pred cCC--CcEEEeeCCCEEEcCC-CCCCCEEEEEEEEcCCCce
Q psy14886 131 GSG--GRRKIFENGNLLISPV-SRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 131 ~~~--~~~~~~~~~~l~i~~v-~~~d~G~y~C~~~~~~g~~ 168 (505)
... .......+++|.|.++ ..+|+|.|+|.|.|..|..
T Consensus 153 ~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~ 193 (204)
T 1sy6_A 153 GGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPED 193 (204)
T ss_dssp SCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGG
T ss_pred CCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCc
Confidence 643 2223335788999999 9999999999999999863
No 196
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.83 E-value=1.8e-19 Score=162.45 Aligned_cols=250 Identities=15% Similarity=0.136 Sum_probs=161.0
Q ss_pred CceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEE-eeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEE
Q psy14886 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174 (505)
Q Consensus 96 ~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l 174 (505)
+....+.+|++++|.|.+.+ .+.|++++.... .... .....|.|.+++.+|+|.|+|.+.+..+.....+.|
T Consensus 11 ~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~---~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l 83 (289)
T 3ejj_X 11 GPELVVEPGETVTLRCVSNG----SVEWDGPISPYW---TLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHL 83 (289)
T ss_dssp SSEEEECTTCCEEEEEECSS----CCEEECSCSSSS---EECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEE
T ss_pred CceEEECCCCCEEEEEEeCC----cEEEccCCCceE---EEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEE
Confidence 46678999999999999987 499998764321 1111 123569999999999999999999988887888889
Q ss_pred EEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEe-CCEEecCCCCCcccCCeeeecCCeEEEecCCCCCC
Q psy14886 175 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADA 253 (505)
Q Consensus 175 ~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 253 (505)
.|..+|......+....+..|+.+.|.|.+.+.+.+. .+.|++ ++..+.... ......+..|.|..+..+|.
T Consensus 84 ~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~-~v~W~~~~~~~~~~~~------~~~~~~~~~L~i~~v~~~d~ 156 (289)
T 3ejj_X 84 YVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKD-SVSLMREGGRQVLRKT------VYFFSPWRGFIIRKAKVLDS 156 (289)
T ss_dssp EECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGG-SEEEEEGGGEECCTTC------CEEEETTTEEEESSCCGGGC
T ss_pred EEeCCCcceecccceEEEecCCceEeEEEccCCCcce-EEEEEecCCeecCCCc------cEEECCCCCEEEeecccccC
Confidence 9987776555556777889999999999998865432 366975 555554321 22233456899999999999
Q ss_pred EEEEEEEE-ecCCcEEEEEEEEEcCCCCCCCceEE-----EEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEe
Q psy14886 254 GEYECVVK-STVGKISTKTTVIVEGPPGLPGGVQV-----VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 327 (505)
Q Consensus 254 g~y~C~~~-n~~g~~~~~~~l~v~~~p~~p~~~~~-----~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~ 327 (505)
|.|+|.+. +..+..+..+.|.|...+..+..+.. ....+..+.|.|... +..+...+.+. ..
T Consensus 157 G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~--~~~p~~~i~W~----------~~ 224 (289)
T 3ejj_X 157 NTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSAT--NAEVGFNVILK----------RG 224 (289)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEE--ESSSCCEEEEE----------ET
T ss_pred EEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeC--CCCCceEEEEE----------EC
Confidence 99999998 44455566778888743322211221 113466778888742 11222333332 22
Q ss_pred eecccccee-----eeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCC
Q psy14886 328 SEHVIGKEV-----DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 372 (505)
Q Consensus 328 ~~~~~~~~~-----~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~ 372 (505)
...+..... ........+.+.+ +...+.+.|+|.|.|..|....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~~ 273 (289)
T 3ejj_X 225 DTKLEIPLNSDFQDNYYKKVRALSLNA-VDFQDAGIYSCVASNDVGTRTA 273 (289)
T ss_dssp TEECCCCEEEEECSSSEEEEEEEEESS-CCSSSCEEEEEEEECSSCEEEE
T ss_pred CEEeeccCCcccccceEEeeEEEEEEe-ecccCCEEEEEEEEcCCCCccc
Confidence 111110000 0001123444444 8999999999999999998753
No 197
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.83 E-value=7.7e-19 Score=158.18 Aligned_cols=184 Identities=16% Similarity=0.153 Sum_probs=139.6
Q ss_pred CCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCC-CCCeEEeeeccccceeeeecCceeeEEeeeccCCce
Q psy14886 278 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 356 (505)
Q Consensus 278 ~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 356 (505)
+|.+|.++.+...+.+++.|+|+++ ++.+.+|.|+|+... ...|....... ....+.+. +|.+++.
T Consensus 20 ~p~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~~~---------~~~~~~i~-~L~p~t~ 86 (290)
T 3r8q_A 20 AIPAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINLAP---------DSSSVVVS-GLMVATK 86 (290)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECC---SSCCCEEEEEEEESSSSSCCEEEEECT---------TCCEEEEC-SCCSSCE
T ss_pred CCCCCCceEEEECCCCEEEEEEeCC---CCCeeEEEEEEEeCCCCCceEEEEcCC---------CccEEEeC-CCCCCCE
Confidence 5678889999999999999999987 347899999998876 35565543221 22344444 4999999
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEE
Q psy14886 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 436 (505)
Q Consensus 357 y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~ 436 (505)
|.|+|.|.|..|.+.++.. .+.+.+.. .+|.++.+.....+++.|.|+++ ++.+.+|.|+|+..+...+..
T Consensus 87 Y~~~V~a~~~~g~s~~s~~--~~~t~~~~--~~P~~l~~~~~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~~~~ 157 (290)
T 3r8q_A 87 YEVSVYALKDTLTSRPAQG--VVTTLENV--SPPRRARVTDATETTITISWRTK-----TETITGFQVDAVPANGQTPIQ 157 (290)
T ss_dssp EEEEEEEEETTEECCCEEE--EEECCCCC--CCCEEEEEEEECSSCEEEEEECC-----SCCCCEEEEEEEESSSCCCEE
T ss_pred EEEEEEEEeCCCCCCCcce--eEecCCCC--CCCceeEEEEcCCCeEEEEEeCC-----CCcccEEEEEEEECCCCcceE
Confidence 9999999999999987643 34444332 58899999988899999999983 467999999999987555443
Q ss_pred EEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecceE
Q psy14886 437 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPLV 488 (505)
Q Consensus 437 ~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~~ 488 (505)
..... ....+.|.+|.|++.|.|+|.|+|..|.|+++. +...|.|..
T Consensus 158 ~~~~~----~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t~p~~ 204 (290)
T 3r8q_A 158 RTIKP----DVRSYTITGLQPGTDYKIYLYTLNDNARSSPVV-IDASTAIDA 204 (290)
T ss_dssp EEECT----TCSEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEECCCCC
T ss_pred EecCC----CccEEEECCCCCCCEEEEEEEEEeCCcccCCEE-EEecCCCCC
Confidence 33322 345688999999999999999999999988754 334444433
No 198
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.83 E-value=4.2e-20 Score=155.65 Aligned_cols=167 Identities=14% Similarity=0.057 Sum_probs=114.9
Q ss_pred EEeeCCCeEEEEee---cCCCCCCeEEEEECCEEecC-----------------CCcEEEeeC---CCEEEcCCCCCCCE
Q psy14886 99 TYAGEGGNVTIFCN---PEAAPKPKFVWKKDGNIIGS-----------------GGRRKIFEN---GNLLISPVSRDDSG 155 (505)
Q Consensus 99 ~~v~~g~~v~l~C~---~~~~p~~~i~W~~~g~~~~~-----------------~~~~~~~~~---~~l~i~~v~~~d~G 155 (505)
+.+..|++++|.|. +.+.|.+.|.|+|+|..+.. ..++.+... ..|.|.+++.+|+|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 82 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDG 82 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCe
Confidence 46789999999994 67788999999997642210 111222211 25999999999999
Q ss_pred EEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCe
Q psy14886 156 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 235 (505)
Q Consensus 156 ~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 235 (505)
.|+|.|.|..|.....+.|.|..+|.+. ..+....+..|+.+.|.|.+.|.|.| .+.|.+++..+...... .. ..
T Consensus 83 ~Y~C~a~n~~g~~~~~~~l~V~~p~~~~-~~~~~~~v~~g~~~~l~C~~~G~P~P--~v~W~~~~~~~~~~~~~-~~-r~ 157 (203)
T 4fa8_A 83 NYLCRMKLGETEVTKQEHLSVVKPLTLS-VHSERSQFPDFSVLTVTCTVNAFPHP--HVQWLMPEGVEPAPTAA-NG-GV 157 (203)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEEEEE-EEEEECCSSCSCCEEEEEEEEEESCC--EEEECCC--------------CC
T ss_pred EEEEEEEcCCCcEEEEEEEEecCCceee-ecceeEEEcCCCEEEEEEEcCCCCCC--EEEEEECCeeecCcccc-cc-eE
Confidence 9999999999998888889886655443 33445567789999999999999877 45698765443221100 00 11
Q ss_pred eeecCCeE---EEecCCCCCCEEEEEEEEecCCcEEEE
Q psy14886 236 INIDGGLL---EITNASFADAGEYECVVKSTVGKISTK 270 (505)
Q Consensus 236 ~~~~~~~l---~i~~~~~~~~g~y~C~~~n~~g~~~~~ 270 (505)
....++.+ .+..+..+|.|.|+|.|.|..|.....
T Consensus 158 ~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 158 MKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp EECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred EEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 11223333 446788999999999999999987653
No 199
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.83 E-value=1.9e-19 Score=154.46 Aligned_cols=172 Identities=19% Similarity=0.311 Sum_probs=130.5
Q ss_pred ceEEeeCCCeEEEEeecCCCC----CCeEEEEE----------------CCEEecC-----CCcEEEee------CCCEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP----KPKFVWKK----------------DGNIIGS-----GGRRKIFE------NGNLL 145 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p----~~~i~W~~----------------~g~~~~~-----~~~~~~~~------~~~l~ 145 (505)
..+.+.+|+++.|.|.+.+.+ .+.+.|++ ++..+.. ..+..+.. +.+|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 556789999999999998876 46999988 4444432 34555443 45799
Q ss_pred EcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEe-eecCCCCeEEEEEeCCE--E
Q psy14886 146 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGV--R 222 (505)
Q Consensus 146 i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~~~w~~~~~--~ 222 (505)
|.+++.+|+|.|+|.+.+..|.....+.|.|..+|...... ....+..|+.+.|.|.+ .+.|.+ .+.|++++. .
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~-~~~~~~~g~~v~l~C~~~~g~p~~--~v~W~~~~~~~~ 164 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCF-VDGSEEIGNDFKLKCEPKEGSLPL--QFEWQKLSDSQT 164 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEE-EESCCBTTCCEEEEEECSBCCSSC--EEEEEECSTTCC
T ss_pred EccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceee-eecceecCCcEEEEecCCCCCCCC--EEEEEECCCCCc
Confidence 99999999999999999998888888899998777654332 22236789999999999 666654 667998543 2
Q ss_pred ecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCC
Q psy14886 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278 (505)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~ 278 (505)
+... ......+..|.|..+..+|.|.|+|.|.|..|.....+.|.|..|
T Consensus 165 ~~~~-------~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 213 (214)
T 3jz7_A 165 MPTP-------WLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPP 213 (214)
T ss_dssp CCGG-------GGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCC
T ss_pred cCcc-------ceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCC
Confidence 2211 122234568999999999999999999999999999988888744
No 200
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.82 E-value=2.9e-19 Score=147.80 Aligned_cols=157 Identities=20% Similarity=0.289 Sum_probs=122.3
Q ss_pred eEEeeCCCeEEEEeecCCCCCCe-EEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 98 ETYAGEGGNVTIFCNPEAAPKPK-FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p~~~-i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
...+.+|++++|.|.+.+.|.+. +.|+++|..+.. ..+.|.|.+++.+|+|.|+|.+.|..+ ...+.|.|
T Consensus 16 ~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-------~~~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~~l~V 86 (175)
T 1fnl_A 16 WYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-------QASSYFIDAATVNDSGEYRCQTNLSTL--SDPVQLEV 86 (175)
T ss_dssp CSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES-------SCSEEEESSCCGGGCEEEEEECSSSCC--CCCEEEEE
T ss_pred ceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-------CceEEEEeCCCcccCEEEEEEeeCCcc--cccEEEEE
Confidence 34688999999999999987765 889999988753 245799999999999999999988544 44567777
Q ss_pred EeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEE
Q psy14886 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 256 (505)
Q Consensus 177 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y 256 (505)
..++.... .....+..|+.+.|.|.+.+.+++ ..+.|++++..+.. ......|.|..+..+|.|.|
T Consensus 87 ~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~~-~~~~W~k~g~~~~~-----------~~~~~~L~i~~v~~~d~G~Y 152 (175)
T 1fnl_A 87 HIGWLLLQ--APRWVFKEEDPIHLRCHSWKNTAL-HKVTYLQNGKDRKY-----------FHHNSDFHIPKATLKDSGSY 152 (175)
T ss_dssp ECSSEEEE--CSCSEEETTCCEEEEEEECTTCCC-EEEEEEETTEEEEE-----------EEECCCEEESSCCGGGCEEE
T ss_pred eCCCceee--CCCceecCCCCEEEEEEcCCCCCc-eEEEEEECCeEccC-----------CCCCCEEEEcccChhhCeEE
Confidence 65544433 234667899999999999877654 57889999988742 12357899999999999999
Q ss_pred EEEEEecCCc-EEEEEEEEEcC
Q psy14886 257 ECVVKSTVGK-ISTKTTVIVEG 277 (505)
Q Consensus 257 ~C~~~n~~g~-~~~~~~l~v~~ 277 (505)
+|.|.|..|. .+..+.|.|.+
T Consensus 153 ~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 153 FCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp EEEEEETTEEEECCCEEEEEEC
T ss_pred EEEEEcCCCCccCccEEEEEeC
Confidence 9999997664 44556676654
No 201
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=4e-20 Score=154.80 Aligned_cols=154 Identities=19% Similarity=0.283 Sum_probs=109.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce--Eee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR--YSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~--~~~ 78 (505)
|.+|++++|.|.+.+ +...+.|+|++..+..... .......+++|.|.+++ .+|+|.|+|.+.+..+.. ...
T Consensus 15 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~----~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~~~~~~~~~s~~ 88 (188)
T 1oll_A 15 VPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP----KPPERINKVKFYIPDMN-SRMAGQYSCIYRVGELWSEPSNL 88 (188)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC----SSCTTCCEEEEEESSCC-GGGCEEEEEEEEETTEECCCCCC
T ss_pred CCCCCCEEEEEecCC-CCCEEEEEECCCccccccc----ccCCCcceeEEEeCcCC-cccCeEEEEEecCCCCCCCCCCc
Confidence 468999999999975 4578999999987642100 00011134689999999 999999999998764422 334
Q ss_pred EEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEE
Q psy14886 79 AQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 156 (505)
Q Consensus 79 ~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 156 (505)
+.|.|... +|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+... ......++.|.|.+++.+|+|.
T Consensus 89 ~~l~V~~~~~~p~i~~~p---~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~-~~~~~~~~~L~I~~v~~~d~G~ 163 (188)
T 1oll_A 89 LDLVVTEMYDTPTLSVHP---GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ-RGYGKVQAEFPLGPVTTAHRGT 163 (188)
T ss_dssp EEEEEESCSCCCEEEEES---CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEEE-EEECSSEEEEEEEECCGGGCEE
T ss_pred eEEEecccCCCCeEEECC---CCccccCCEEEEEEEcCCC-CCEEEEEECCcccccc-ccCCCceeEEEECCCCcCCCcE
Confidence 66777642 34443322 2457899999999998764 5699999998765431 1111234579999999999999
Q ss_pred EEEEEEcCC
Q psy14886 157 YSCTATNVH 165 (505)
Q Consensus 157 y~C~~~~~~ 165 (505)
|+|.|.|..
T Consensus 164 Y~C~a~n~~ 172 (188)
T 1oll_A 164 YRCFGSYNN 172 (188)
T ss_dssp EEEECEEET
T ss_pred EEEEEEcCC
Confidence 999998764
No 202
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.82 E-value=5.6e-19 Score=161.28 Aligned_cols=262 Identities=16% Similarity=0.194 Sum_probs=156.8
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCC-
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH- 165 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~- 165 (505)
+|.+...+. ..+.+|++++|.|.+.+. .+.+.|+|+|..+... .......+.|.|.+++.+|+|.|+|.|.+..
T Consensus 24 ~P~i~~~p~---~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 98 (316)
T 3vh8_G 24 KPFLSAWPS---AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI-FHGRIFQESFNMSPVTTAHAGNYTCRGSHPHS 98 (316)
T ss_dssp CCEEEEESC---SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH-HHHCCBSSCEEECSCCGGGCEEEEEEEBCSSS
T ss_pred CCEeeccCC---CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee-ecCCcceEEEEECCCCcccCeEEEEEEEcCCC
Confidence 565655542 357899999999999887 6799999999765431 1111235679999999999999999998643
Q ss_pred ----CceeeeEEEEEEeCC--eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeec
Q psy14886 166 ----GMDESKGRLIVLHGP--SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239 (505)
Q Consensus 166 ----g~~~~~~~l~v~~~p--~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 239 (505)
+.....+.|.|...+ +.+...+. ..+..|+.++|.|.+.+. . ..+.|++++..+....... .......
T Consensus 99 ~~~~~~~s~~~~l~V~~~~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~-~--~~~~w~k~g~~~~~~~~~~--~~~~~~~ 172 (316)
T 3vh8_G 99 PTGWSAPSNPVVIMVTGNHRKPSLLAHPG-PLVKSGERVILQCWSDIM-F--EHFFLHKEGISKDPSRLVG--QIHDGVS 172 (316)
T ss_dssp SSSBCCCCCCEEEEEECSSCCCEEEEESC-SEEETTCCEEEEEEESSC-C--SEEEEEETTCCSCCEEEEC--EEETTEE
T ss_pred CcceecCCCcEEEEEecCCCCCeEEecCC-CccCCCCeEEEEEcCCCC-C--cEEEEEECCCccccceeee--eecCCCc
Confidence 223344677776532 22222222 337889999999998533 2 3677999887653311000 0000113
Q ss_pred CCeEEEecCCCCCCEEEEEEEEecCCc-----EEEEEEEEEcCCCCCCCceEE----EEEeCCeEEEEeecCCCCCCCCc
Q psy14886 240 GGLLEITNASFADAGEYECVVKSTVGK-----ISTKTTVIVEGPPGLPGGVQV----VEVHKTSATIQWTDGATNGRPIT 310 (505)
Q Consensus 240 ~~~l~i~~~~~~~~g~y~C~~~n~~g~-----~~~~~~l~v~~~p~~p~~~~~----~~~~~~~v~l~w~~~~~~~~~i~ 310 (505)
...|.|..+..+|.|.|+|.|.|..|. .+..+.|.|...+.+|. +.. ....+..++|.|.... +..
T Consensus 173 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~-i~~~~~~~v~~G~~v~L~C~~~~----~~~ 247 (316)
T 3vh8_G 173 KANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPS-LSAQPGPKVQAGESVTLSCSSRS----SYD 247 (316)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCE-EEEESCSCCCTTSCCEEEEEESS----CCS
T ss_pred eEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCe-EEeCCCCeecCCCcEEEEEECCC----CCc
Confidence 457999999999999999999998874 24556777766544442 222 1235678999998531 223
Q ss_pred eEEEEEEeCCCCCeEEeeeccccceeeeecC-c-eeeEEeeeccCCceeEEEEEEEcCCCcCCCCCC
Q psy14886 311 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG-R-KEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 375 (505)
Q Consensus 311 ~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~-~-~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~ 375 (505)
.|.+.. .+.......... ....+ . ..+.+.. +. +.+.|+|.|.|..+...+|..
T Consensus 248 ~~~W~k--~g~~~~~~~~~~------~~~~~~~~~~L~i~~-v~--D~G~Y~C~a~n~~~~~~~s~~ 303 (316)
T 3vh8_G 248 MYHLSR--EGGAHERRLPAV------RKVNRTFQADFPLGP-AT--HGGTYRCFGSFRHSPYEWSDP 303 (316)
T ss_dssp EEEEEE--TTSSCCEEEECE------ECTTSCEEEEEECC--------CEEEEEEEBTTBTTEECCC
T ss_pred EEEEEE--CCCcCCCceece------eccCCceeEEEEcCC-cC--CCEEEEEEeecCCCchhccCC
Confidence 344332 222111110000 00001 1 2333333 66 899999999998876433333
No 203
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.82 E-value=2.3e-19 Score=148.60 Aligned_cols=169 Identities=24% Similarity=0.288 Sum_probs=126.6
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCC-eEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
+|.+...+ ....+.+|++++|.|.+.+.+.+ .+.|++++..+... ++.|.|.+++.+|+|.|+|.+.+..
T Consensus 4 ~P~i~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~-------~~~L~i~~v~~~d~G~Y~C~~~~~~ 74 (176)
T 1f2q_A 4 KPKVSLNP--PWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET-------NSSLNIVNAKFEDSGEYKCQHQQVN 74 (176)
T ss_dssp CCCCEEES--SCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC-------SSEEEECSCCGGGCEEEEEECTTSS
T ss_pred CCEEEcCC--CCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC-------ceEEEEeccceecCEEEEEEcCCcc
Confidence 44554444 33568999999999999988775 79999999887642 5679999999999999999998755
Q ss_pred CceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEE
Q psy14886 166 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245 (505)
Q Consensus 166 g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 245 (505)
+ ...+.|.|..++..... ....+..|+.+.|.|.+.+.++ ...+.|+++|..+... ..+..|.|
T Consensus 75 ~--s~~~~l~V~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~~~~~-----------~~~~~L~i 138 (176)
T 1f2q_A 75 E--SEPVYLEVFSDWLLLQA--SAEVVMEGQPLFLRCHGWRNWD-VYKVIYYKDGEALKYW-----------YENHNISI 138 (176)
T ss_dssp C--CCCEEEEEECSSEEEEE--SCSEEETTSCEEEEEEEGGGCC-EEEEEEEETTEECCSC-----------CCSSEEEE
T ss_pred c--cccEEEEEeCcceeecC--CcceeeCCCCEEEEEEecCCCC-ceEEEEEECCEEEeee-----------cCCCeEEE
Confidence 4 34566777644443332 3356789999999999965443 3578899999887432 13568999
Q ss_pred ecCCCCCCEEEEEEEEecCCc-EEEEEEEEEcCCCC
Q psy14886 246 TNASFADAGEYECVVKSTVGK-ISTKTTVIVEGPPG 280 (505)
Q Consensus 246 ~~~~~~~~g~y~C~~~n~~g~-~~~~~~l~v~~~p~ 280 (505)
..+..+|.|.|+|.|.|..+. .+..+.|.|..+|.
T Consensus 139 ~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 139 TNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred CCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 999999999999999997544 44568888887764
No 204
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.82 E-value=2.1e-19 Score=155.49 Aligned_cols=170 Identities=14% Similarity=0.169 Sum_probs=111.5
Q ss_pred CCCCceEEEEEEeccCC---CeEEEEECCEE-----------CcCCCCCCCCCCcEEEE-------CCeEEEEcCCCCCC
Q psy14886 2 DNQADLTWTCEAFGVPD---VTYSWFRNGEL-----------LNSETLPLEDQDRYFIQ-------DNVLTIRYLNPERD 60 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~---~~~~W~~~~~~-----------l~~~~~~~~~~~~~~~~-------~~~L~i~~~~~~~d 60 (505)
.+|++++|.|.+.+.+. ..|.|+|++.. +..... .....|.... +.+|.|.+++ .+|
T Consensus 17 ~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~-~~~~~r~~~~~~~~~~~~~~L~I~~v~-~~D 94 (226)
T 4f80_A 17 MVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQS-APYRGRTSILRDGITAGKAALRIHNVT-ASD 94 (226)
T ss_dssp ETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSC-TTTTTTEEEECTTGGGTEEEEEESSCC-GGG
T ss_pred EcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccC-ccccceEEEecccccCCeEEEEEeeCc-hHH
Confidence 57999999999986543 47999997532 211111 1122344332 2479999999 999
Q ss_pred CeEEEEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCCeEEEEECCEE-ecCCC-cEE
Q psy14886 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGNI-IGSGG-RRK 137 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~~i~W~~~g~~-~~~~~-~~~ 137 (505)
+|.|+|.|.|..+.....+.+.+.. +. ... .....+.+|+.+.|.|.+.+ .|.|.|+|++++.. +.... ...
T Consensus 95 ~G~Y~C~a~n~~~~~~~~v~~~~~~--~~-~~~--~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~ 169 (226)
T 4f80_A 95 SGKYLCYFQDGDFYEKALVELKVAA--LG-SDL--HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVV 169 (226)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEB--CC-CCC--EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCE
T ss_pred CeeEEEEEECCCcEEEEEEEEeecc--ce-ecc--cceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEE
Confidence 9999999999776655444444432 21 111 24466889999999999988 48999999996543 33221 122
Q ss_pred EeeCCC---EEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe
Q psy14886 138 IFENGN---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 178 (505)
Q Consensus 138 ~~~~~~---l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~ 178 (505)
...++. +.+..++.+|.|.|+|.|.|..|.....+.|.|.+
T Consensus 170 ~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 170 ADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp ECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred ECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 222333 23446778999999999999999998888887743
No 205
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.82 E-value=2.8e-21 Score=199.39 Aligned_cols=244 Identities=14% Similarity=0.082 Sum_probs=170.1
Q ss_pred CCeEEEecCCCCCCEEEEEEE-EecCCc----EEEE--EEEEE-cCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCce
Q psy14886 240 GGLLEITNASFADAGEYECVV-KSTVGK----ISTK--TTVIV-EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH 311 (505)
Q Consensus 240 ~~~l~i~~~~~~~~g~y~C~~-~n~~g~----~~~~--~~l~v-~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~ 311 (505)
...+.+..+.+...+.|+..| .|..|. ...+ +.+.. ..+|.+|..+.+...+.+++.|+|++|...++.+.+
T Consensus 548 ~~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~ 627 (897)
T 2dtg_E 548 HPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITH 627 (897)
T ss_dssp CCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCCSSSSCSE
T ss_pred ccceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCCCCCCeeE
Confidence 356888899888888889998 777775 2222 22222 347788888999888999999999999877888999
Q ss_pred EEEEEEeCCCC-----------------------------------------------------------------CeEE
Q psy14886 312 YKIIARTNWNS-----------------------------------------------------------------TWFN 326 (505)
Q Consensus 312 y~v~~~~~~~~-----------------------------------------------------------------~w~~ 326 (505)
|.|+|+..... .|..
T Consensus 628 Y~V~~~~~~~~~~~~~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~~~~~~~s~~~~W~~ 707 (897)
T 2dtg_E 628 YLVFWERQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQILKELEESSFRKTFED 707 (897)
T ss_dssp EECCEEEECCCCSCTTCSSSCSCCCCCC----------------------------------------------------
T ss_pred EEEEEEECCCCccceecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchhhhhhhhheeeeEEE
Confidence 99988764321 1110
Q ss_pred eeeccccce-----------------------eeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCC-CC-CCCCccC
Q psy14886 327 VSEHVIGKE-----------------------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP-SS-PSPQYNT 381 (505)
Q Consensus 327 ~~~~~~~~~-----------------------~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~-s~-~~~~~~t 381 (505)
......... .........+.+. +|.|++.|.|+|.|.|..|.+++ +. ....+.|
T Consensus 708 ~~~n~v~~~~p~~~r~~l~~~~n~t~~~~~~~~~~~~~~t~~~i~-gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T 786 (897)
T 2dtg_E 708 YLHNVVFVPRPSRKRRSLGDVGNAGNNEEHRPFEKVVNKESLVIS-GLRHFTGYRIELQACNQDTPEERCSVAAYVSART 786 (897)
T ss_dssp ----------------------------CCSCSCEECSCSEEEEC-SSCSSCEEEECCEEESCSSSSCCBCCCCCEEEEC
T ss_pred ccCceEEccCCCcccccccccccccCccccceEEecCCceEEEEC-CCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEec
Confidence 000000000 0000122344444 59999999999999999998764 22 2224556
Q ss_pred CC-CCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceee
Q psy14886 382 PA-DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460 (505)
Q Consensus 382 ~~-~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 460 (505)
.+ ..++.+|.++.+...+.++|.|+|++ +.+.+|.|++|.|+|+..+. .|....+..........+.|.+|.|+ +
T Consensus 787 ~~~~~~p~~P~~l~~~~~~~~sv~LsW~~--P~~~nG~I~~Y~V~y~~~~~-~~~~~~~~~~~~~~~~~~~l~~L~pg-t 862 (897)
T 2dtg_E 787 MPEAKADDIVGPVTHEIFENNVVHLMWQE--PKEPNGLIVLYEVSYRRYGD-EELHLCDTRKHFALERGCRLRGLSPG-N 862 (897)
T ss_dssp CCCCCCCCCCCCCCCCSSSSSCCCCCCCC--CCSCSSCEEEECCCCBSSSB-CCCCCCCCSSSCCCTTCCCCCSCCSS-E
T ss_pred cCccCCCCCCcceEEEeCCCCEEEEEECC--CCCCCCCEEEEEEEEEECCC-cceEEEEeeeeecccCcEEECCCCCC-c
Confidence 54 35567888999888889999999998 45788899999999998774 22211111111123456789999999 6
Q ss_pred EEEEEEEecCCCCCCCCceEEEeecceE
Q psy14886 461 YEVKVQAINDVGPGPESEVVTIWHDPLV 488 (505)
Q Consensus 461 Y~~~v~a~n~~G~g~~s~~~~~~t~p~~ 488 (505)
|.|+|+|+|.+|.|++|+.+.+.|.+..
T Consensus 863 Y~~rV~A~n~~G~G~~S~~v~~~T~~~p 890 (897)
T 2dtg_E 863 YSVRIRATSLAGNGSWTEPTYFYVTDYL 890 (897)
T ss_dssp ECCCCCEEETTBCCCCCCCCEECCCCCC
T ss_pred EEEEEEEEeCCcccCCCCCEEEEeCCCC
Confidence 9999999999999999999999987643
No 206
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.82 E-value=2.4e-20 Score=164.73 Aligned_cols=257 Identities=12% Similarity=0.082 Sum_probs=100.7
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
|.+|++++|+|.+....+..+.|.-. +..+.. ... ....+.+.+++ .+ |.|+|.+..........
T Consensus 11 V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~------~g~----~~~~~~l~~v~-~~--~~y~C~~~~~~~~~~~~ 77 (291)
T 1mq8_A 11 LPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLL------PGN----NRKVYELSNVQ-ED--SQPMCYSNCPDGQSTAK 77 (291)
T ss_dssp ECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCC------SCS----SEEEEEEESCC-SC--CCCEEEEECSSCEEEEE
T ss_pred EcCCCeEEEEEeCCCCCCccceEEecCCCccccc------CCC----ceEEEEEEecc-cC--CeEEEEEEcCCccEEEE
Confidence 57899999999996433344888541 111100 000 01247888887 53 46999997543344556
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC--eEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCE
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP--KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 155 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~--~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G 155 (505)
+.|.|...|..+.+.+.+ ..+.+|+.++|.|.+.+. |.. .|+|+|+++.+............+|.+.....+|++
T Consensus 78 v~l~V~~~P~~v~I~~~~--~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~ 155 (291)
T 1mq8_A 78 TFLTVYWTPERVELAPLP--SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGA 155 (291)
T ss_dssp CEEEECBCCSCCCBCCCC--SBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSC
T ss_pred EEEEEecCCCCCEEecCC--ccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeeccCCc
Confidence 788888644344444322 337899999999998876 433 699999998775321000001224666666677777
Q ss_pred EEEEEEEcCCCc--------eeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCC-CeEEEEEeCCEEecCC
Q psy14886 156 IYSCTATNVHGM--------DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL-DVAYIWTHNGVRIGNM 226 (505)
Q Consensus 156 ~y~C~~~~~~g~--------~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~~~~~~ 226 (505)
.|+|.|.+..+. .+....|.|.+.|...........+..|+.++|.|.+.+.+++ .+.+.|.++|..+...
T Consensus 156 ~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~ 235 (291)
T 1mq8_A 156 NFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPT 235 (291)
T ss_dssp EEEEEEEEECGGGTSCEEEECCCCEECBC---------------------------------------------------
T ss_pred eEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCce
Confidence 999999987552 2334677777765432111112256789999999999997544 5778899998887642
Q ss_pred CCCcccCCeeeecCCeEEEecC---CC--CCCEEEEEEEEecCCcEEEEEEEEEcCCCCC
Q psy14886 227 DLNELETPNINIDGGLLEITNA---SF--ADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281 (505)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~i~~~---~~--~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~ 281 (505)
. ..++..+.+... .. +..+.|+|.|.+..........|+|...|.|
T Consensus 236 ~---------~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~ 286 (291)
T 1mq8_A 236 V---------TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAP 286 (291)
T ss_dssp ------------------------------------------------------------
T ss_pred e---------eecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCc
Confidence 1 112223333322 23 3467778888875555667778888776544
No 207
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.82 E-value=2.6e-20 Score=160.91 Aligned_cols=178 Identities=20% Similarity=0.296 Sum_probs=119.7
Q ss_pred CCCCCceEEEEEEeccCC-----CeEEEEECCEECcCCCC------CCCCCCcEEEE-------CCeEEEEcCCCCCCCe
Q psy14886 1 MDNQADLTWTCEAFGVPD-----VTYSWFRNGELLNSETL------PLEDQDRYFIQ-------DNVLTIRYLNPERDPA 62 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~-----~~~~W~~~~~~l~~~~~------~~~~~~~~~~~-------~~~L~i~~~~~~~d~G 62 (505)
+.+|++++|.|.+.+.|. +.+.|+|++........ .....+|+.+. +.+|.|.+++ .+|+|
T Consensus 7 ~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~-~~D~G 85 (222)
T 4i0k_A 7 ALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVR-VTDEG 85 (222)
T ss_dssp CCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCC-GGGCS
T ss_pred EECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcc-cccCE
Confidence 568999999999987653 78999998643310000 00123445442 5689999999 99999
Q ss_pred EEEEEEEcccCceEeeEEEEEEecC--CCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEE-CCEEecCCCcEEE
Q psy14886 63 MYQCRAKNQLKTRYSSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKK-DGNIIGSGGRRKI 138 (505)
Q Consensus 63 ~Y~C~~~~~~~~~~~~~~l~v~~~~--p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~-~g~~~~~~~~~~~ 138 (505)
.|+|.+.+. +.....+.|.|...+ |.+...+ ...+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+........
T Consensus 86 ~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~---~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~ 161 (222)
T 4i0k_A 86 SYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP---NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQ 161 (222)
T ss_dssp CEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC--------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEE
T ss_pred EEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC---CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeE
Confidence 999999975 333445566665422 3333322 2357789999999999 788999999999 5555443222222
Q ss_pred e--eCCC---EEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCeee
Q psy14886 139 F--ENGN---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 183 (505)
Q Consensus 139 ~--~~~~---l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~ 183 (505)
. .++. |.|.++..+|.|.|+|.|.|..|.....+.|.|..+|...
T Consensus 162 ~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~ 211 (222)
T 4i0k_A 162 MANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPLTF 211 (222)
T ss_dssp EECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-----
T ss_pred EcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcccc
Confidence 2 2232 7889999999999999999999999999999987665443
No 208
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.82 E-value=2.9e-19 Score=153.07 Aligned_cols=177 Identities=21% Similarity=0.312 Sum_probs=130.6
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEe------------cCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII------------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~------------~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
....+.+|+++.|.|.+.+.|.+.+.|++++..+ ....+.... ...|.|.+++..|+|.|+|.+.+.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~G~Y~C~~~~~ 87 (212)
T 1f97_A 9 SDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDNGEYTCMVSEE 87 (212)
T ss_dssp SEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGCEEEEEEEEET
T ss_pred CCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-ceeEEEcccCcccCeEEEEEEEcc
Confidence 5677899999999999998888999999976542 113344333 478999999999999999999998
Q ss_pred CC--ceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEE-eeecCCCCeEEEEEeCCE-EecCCCCC--cc--cCCee
Q psy14886 165 HG--MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWTHNGV-RIGNMDLN--EL--ETPNI 236 (505)
Q Consensus 165 ~g--~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~-~~~~~~~~~~~~w~~~~~-~~~~~~~~--~~--~~~~~ 236 (505)
.| .....+.|.|..+|...... ....+..|+.+.|.|. +.+.|.+ .+.|++++. .+...... .. .....
T Consensus 88 ~g~~~~~~~~~l~V~~~p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~l~~~~~~~~~~~~~~~~~ 164 (212)
T 1f97_A 88 GGQNYGEVSIHLTVLVPPSKPTIS-VPSSVTIGNRAVLTCSEHDGSPPS--EYSWFKDGISMLTADAKKTRAFMNSSFTI 164 (212)
T ss_dssp TSSSEEEEEEEEEEEBCCCCCEEE-CCSEEETTSCEEEEEECSCCBSCC--EEEEEETTEESBC-----CBSCSSSCEEE
T ss_pred CCCcccEEEEEEEEEcCCCCcccC-CccccCCCCeEEEEEEcccCcCCC--EEEEEeCCcccccccccccccccCceeEe
Confidence 76 44556788887777655432 2356788999999999 6777665 677999998 66542211 00 01112
Q ss_pred eecCCeEEEecCCCCCCEEEEEEEEecCCcE--EEEEEEEEcC
Q psy14886 237 NIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 277 (505)
Q Consensus 237 ~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~--~~~~~l~v~~ 277 (505)
......|.|..+..+|.|.|+|.|.|..|.. +..+.|.|..
T Consensus 165 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 165 DPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp CTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred cCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 2346789999999999999999999999987 4556666654
No 209
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.82 E-value=3.3e-19 Score=167.49 Aligned_cols=270 Identities=14% Similarity=0.135 Sum_probs=180.7
Q ss_pred eCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCC--CCEEEEEEEEe
Q psy14886 185 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA--DAGEYECVVKS 262 (505)
Q Consensus 185 ~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~--~~g~y~C~~~n 262 (505)
..|....+..|.++++.|..... + .....++..... ..+......+++.++... ....|.|...
T Consensus 203 ifP~~~vv~~GS~vt~~Ci~~~~----~-~~~~l~~~~~~~--------~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~- 268 (483)
T 3e0g_A 203 VFPQDKVILVGSDITFCCVSQEK----V-LSALIGHTNCPL--------IHLDGENVAIKIRNISVSASSGTNVVFTTE- 268 (483)
T ss_dssp EESCSEEEETTCCEEEEECCSSC----E-EEEESSSCCBCC--------EECSSSCEEEEECSCCCCCSSCEEEEEEES-
T ss_pred EeccCCEEeCCCCEEEEEEeCcc----c-cceecCccccee--------EEecCCEEEEEEeCCCCccCccceEEEecC-
Confidence 44666778899999999987631 1 112222111110 111222345666666542 3467999852
Q ss_pred cCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCC---CCCceEEEEEEeCCCCCeEEeeeccccceeeee
Q psy14886 263 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG---RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 339 (505)
Q Consensus 263 ~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~---~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~ 339 (505)
.......+.+..+|++|.++.+.......++++|+++.+.+ .+.+.|.|.|+..+ ....+..... ..
T Consensus 269 ---~~~~g~~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g--~~~~C~~~~~-----~~ 338 (483)
T 3e0g_A 269 ---DNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSG--KYVRLKRAEA-----PT 338 (483)
T ss_dssp ---SCEEEEEEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTC--CEEEECCCSS-----CS
T ss_pred ---CcccceEEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECC--CCccccCCcc-----cC
Confidence 23455667888899999999998888889999999987653 23788999987542 2222211100 00
Q ss_pred cCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCC
Q psy14886 340 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419 (505)
Q Consensus 340 ~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i 419 (505)
.......+.. |.+.+.|.|+|.|.|..|.+.. .. .+......+|.||.++++.....+.+.|+|++| ...++.+
T Consensus 339 ~~~~~C~~~~-l~~~t~Y~f~V~A~N~lG~~~S-~~--~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P--~~~~~~~ 412 (483)
T 3e0g_A 339 NESYQLLFQM-LPNQEIYNFTLNAHNPLGRSQS-TI--LVNITEKVYPHTPTSFKVKDINSTAVKLSWHLP--GNFAKIN 412 (483)
T ss_dssp CSCEEEEEEC-CTTCCCEEEEEEEECSSCEEEE-EE--EECGGGGBCCCCCEEEEECCSSSSSCCEEEECC--SCCTTSB
T ss_pred CCEEEEEEcc-CCCCcEEEEEEEEEeCCCCccc-ce--EEEeccccCCCCCeeeEEEEecCCeEEEEECCC--CCCCCce
Confidence 1122344444 8899999999999999998863 32 444446677789999999877889999999984 3566678
Q ss_pred ceEEEEEEEcCCC-CcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCC---CCCCceEEEeecc
Q psy14886 420 IYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIWHDP 486 (505)
Q Consensus 420 ~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~---g~~s~~~~~~t~p 486 (505)
+.|.|+|+..+.. .|....+.. .......+.|.+|.|++.|.|+|+|. ..|. |++|+...+.|..
T Consensus 413 L~YeVrYr~~~~~~~~~~vsv~~-~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 413 FLCEIEIKKSNSVQEQRNVTIQG-VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp CCCEEEEECSSSCCCEEECCCBC-CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEECCCCCceEEEEEec-cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCC
Confidence 9999999998754 354322211 01122357899999999999999999 7777 6777777777754
No 210
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=3.6e-20 Score=162.05 Aligned_cols=195 Identities=14% Similarity=0.182 Sum_probs=114.9
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC-----ce
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK-----TR 75 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~-----~~ 75 (505)
|.+|++++|.|.+.+ +...|.|+|+|..+...... ........+..|.|.+++ .+|+|.|+|.+.+... ..
T Consensus 18 V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~--~~~~~~~~~~~L~I~~v~-~~DsG~Y~C~a~~~~~~~~~s~~ 93 (257)
T 1b6u_A 18 VKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLI--GEHHDGVSKANFSIGPMM-QDLAGTYRCYGSVTHSPYQLSAP 93 (257)
T ss_dssp EESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEE--CBCCTTCEEEEEEECSCC-TTTCEEEEEEEECSSCTTSCCCC
T ss_pred ecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceee--eeccCCCceEEEEeecCC-cccCEEEEEeEeccCCCcccccc
Confidence 458999999999964 56899999998755310000 000001134689999999 9999999999986421 12
Q ss_pred EeeEEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe----eCCCEEEcCC
Q psy14886 76 YSSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF----ENGNLLISPV 149 (505)
Q Consensus 76 ~~~~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~----~~~~l~i~~v 149 (505)
...+.|.|... +|.+...+. ..+.+|++++|.|.+.+.+ +.+.|+|+|..+......... .+..|.|.++
T Consensus 94 S~~~~L~V~~~~~~P~l~~~p~---~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v 169 (257)
T 1b6u_A 94 SDPLDIVITGLYEKPSLSAQPG---PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPA 169 (257)
T ss_dssp CCCEEEEEECSSCCCEEECSSC---TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEEC
T ss_pred CCCEEEecccCCCCcceEccCC---CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEeccc
Confidence 33567777753 344444332 2478999999999998764 699999999765432211111 1346999999
Q ss_pred CCCCCEEEEEEEEcCCC-----ceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEee
Q psy14886 150 SRDDSGIYSCTATNVHG-----MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH 205 (505)
Q Consensus 150 ~~~d~G~y~C~~~~~~g-----~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 205 (505)
+ |+|.|+|.+.+... ..+..+.|.|...|......+.......|..+.|.|.+-
T Consensus 170 ~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~~~~~g~~~~l~~~~~ 228 (257)
T 1b6u_A 170 T--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSETGNPRHLHAAAE 228 (257)
T ss_dssp C--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-------------------------
T ss_pred c--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCcccCccCCCeEEEEEEEc
Confidence 8 99999999997532 223347788877665442222223345678888888653
No 211
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.81 E-value=2.5e-19 Score=154.67 Aligned_cols=175 Identities=13% Similarity=0.208 Sum_probs=119.0
Q ss_pred CCCCceEEEEEEeccC-----CCeEEEEECCEECcCC--------CCCCCCCCcEEEEC-------CeEEEEcCCCCCCC
Q psy14886 2 DNQADLTWTCEAFGVP-----DVTYSWFRNGELLNSE--------TLPLEDQDRYFIQD-------NVLTIRYLNPERDP 61 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p-----~~~~~W~~~~~~l~~~--------~~~~~~~~~~~~~~-------~~L~i~~~~~~~d~ 61 (505)
.+|++++|.|.+.+.| ...+.|+|++..+... .......+|..+.. .+|.|.+++ .+|+
T Consensus 14 ~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~-~~D~ 92 (222)
T 3sbw_C 14 EYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVK-LQDA 92 (222)
T ss_dssp ETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCC-GGGC
T ss_pred EcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcc-cccC
Confidence 5799999999997655 3589999976433110 00001124554432 389999999 9999
Q ss_pred eEEEEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEEC-CEEecCCCcEEEe-
Q psy14886 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKD-GNIIGSGGRRKIF- 139 (505)
Q Consensus 62 G~Y~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~-g~~~~~~~~~~~~- 139 (505)
|.|+|.+.+ .+.....+.|.|.. ++..... .....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.........
T Consensus 93 G~Y~C~~~~-~~~~~~~~~l~V~~-~~~~~~~--~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~ 168 (222)
T 3sbw_C 93 GVYRCMISY-GGADYKRITVKVNA-PYNKINQ--RILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSK 168 (222)
T ss_dssp EEEEEEEES-SSEEEEEEEEEEEB-CCCCCEE--EEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC
T ss_pred eEEEEEEEe-CCCceeEEEEEEEC-CCCCCCc--eeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEc
Confidence 999999998 55566677788874 3322111 1112567899999999999999999999998 6655433222121
Q ss_pred -eCCCEEEc---CCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCCe
Q psy14886 140 -ENGNLLIS---PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPS 181 (505)
Q Consensus 140 -~~~~l~i~---~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~ 181 (505)
.++.+.+. .+...|.|.|+|.|.|..|.....+.|.|...|.
T Consensus 169 ~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 169 REEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp ----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred CCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 12333222 4557899999999999999999888888865543
No 212
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.81 E-value=8.2e-20 Score=157.19 Aligned_cols=173 Identities=18% Similarity=0.260 Sum_probs=119.5
Q ss_pred CCCCCceEEEEEEeccCCC---eEEEEECCEECcCCCC-----------CCCCCCcEEE-------ECCeEEEEcCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVPDV---TYSWFRNGELLNSETL-----------PLEDQDRYFI-------QDNVLTIRYLNPER 59 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~---~~~W~~~~~~l~~~~~-----------~~~~~~~~~~-------~~~~L~i~~~~~~~ 59 (505)
|.+|++++|.|.+.+.|.+ .|.|+|++..+..... .....+|+.. .+.+|.|.+++ .+
T Consensus 11 v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~-~~ 89 (218)
T 4frw_A 11 VVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAV-QA 89 (218)
T ss_dssp EETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCC-GG
T ss_pred EEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeecc-HH
Confidence 3589999999999887654 5899998754431100 0001123322 13579999999 99
Q ss_pred CCeEEEEEEEcccCceEee-EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEE
Q psy14886 60 DPAMYQCRAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI 138 (505)
Q Consensus 60 d~G~Y~C~~~~~~~~~~~~-~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~ 138 (505)
|+|.|.|.+.+..+..... ..+.+.. ++...... .....+..|+.+.|.|.+.+.|.+.|.|++++..+........
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~ 167 (218)
T 4frw_A 90 DEGEYECRVSTFPAGSFQARLRLRVLV-PPLPSLNP-GPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKH 167 (218)
T ss_dssp GCEEEEEEEEEETTEEEEEEEEEEEEB-CCCCEEEE-CSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEEC
T ss_pred HCCceeEEEEeccCceeeeEEEEEEee-eccceeee-eeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEec
Confidence 9999999998766554443 3344443 33322222 2445678899999999999999999999999876654322211
Q ss_pred e----eCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 139 F----ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 139 ~----~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
. ..+.|.|.++...|+|.|+|.|.|..|.....+.+.|
T Consensus 168 ~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 168 SRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp SSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 1 1235999999999999999999999998877666554
No 213
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.81 E-value=4.9e-20 Score=169.68 Aligned_cols=173 Identities=17% Similarity=0.235 Sum_probs=128.5
Q ss_pred CCC---CceEEEEE-EeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEe
Q psy14886 2 DNQ---ADLTWTCE-AFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYS 77 (505)
Q Consensus 2 ~~G---~~~~l~C~-~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~ 77 (505)
.+| +.++|.|. +.+.|.+.+.|+|++.............+.+.+ .+.|.|..++ .+|+|.|+|.|.|..+....
T Consensus 145 ~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~-~~d~G~Y~C~a~n~~~~~~~ 222 (331)
T 3u83_A 145 KKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTV-ISRYRLVPSR-EAHQQSLACIVNYHMDRFKE 222 (331)
T ss_dssp CTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEE-EEEEEECCCG-GGTTCEEEEEEEETTEEEEE
T ss_pred cCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEE-EEEEEEEecc-ccCCCEEEEEEecCCCccee
Confidence 456 77999998 778899999999953211100000011222222 2568899999 99999999999999888777
Q ss_pred eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCe-EEEEECCEEecCCCcEEEeeCCCEEEc-CCCCCCCE
Q psy14886 78 SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK-FVWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSG 155 (505)
Q Consensus 78 ~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~-i~W~~~g~~~~~~~~~~~~~~~~l~i~-~v~~~d~G 155 (505)
.+.|.|.. +|.+...+. ....+.+|+.+.|.|.+.+.|.+. +.|++++..+... ....+++|.|. ++..+|.|
T Consensus 223 ~~~l~V~~-~P~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~---~~~~~~~L~i~~~v~~~d~G 297 (331)
T 3u83_A 223 SLTLNVQY-EPEVTIEGF-DGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKG---VEAQNRTLFFKGPINYSLAG 297 (331)
T ss_dssp EEECCEEE-EEEEEEECC-CSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTT---EEEETTEEEECSCCCGGGCE
T ss_pred eEEEEEec-CCeEEEecC-CCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccccc---ceecCcEEEEeCCCccccCe
Confidence 88888875 555543332 334578999999999999999887 9999999877543 22356789999 99999999
Q ss_pred EEEEEEEcCCCceeeeEEEEEEeCCe
Q psy14886 156 IYSCTATNVHGMDESKGRLIVLHGPS 181 (505)
Q Consensus 156 ~y~C~~~~~~g~~~~~~~l~v~~~p~ 181 (505)
.|+|.|.|..|.....+.|.|...+.
T Consensus 298 ~Y~C~a~N~~G~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 298 TYICEATNPIGTRSGQVEVNITEAAA 323 (331)
T ss_dssp EEEEEEEETTEEEEEEEEECCBC---
T ss_pred EEEEEEEeccccceEEEEEEEeccch
Confidence 99999999999988888888866543
No 214
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=156.96 Aligned_cols=167 Identities=19% Similarity=0.163 Sum_probs=103.6
Q ss_pred CCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCC
Q psy14886 305 NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 384 (505)
Q Consensus 305 ~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~ 384 (505)
.+..|++|.++++......+..... .....+.+.+ |.|++.|.|||+|.|..|.|+++... .+.+...
T Consensus 18 ~~~~Vt~Y~~~~~~~~~~~~~~~~~----------~~~t~~~~~~-L~p~t~Y~frV~A~n~~G~g~~s~~~-~~~t~~~ 85 (232)
T 4go6_B 18 TNVMVTHYFLPPDDAVPSDDDLGTV----------PDYNQLKKQE-LQPGTAYKFRVAGINACGRGPFSEIS-AFKTCLP 85 (232)
T ss_dssp SEEEECEEECCCC----------------------------CEEE-CCTTCEEEEEEEEEETTEEEEECCCE-EEECCCT
T ss_pred CCEEEEEEEEEeeCCCCCcEEEEEC----------CCccEEEeCC-CCCCCEEEEEEEEEeCCCccccccce-eeeecCC
Confidence 3455677877765433222221111 1223445555 99999999999999999999888765 5556666
Q ss_pred CCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeee----------cCceeeEEE----
Q psy14886 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE----------YGNVGIAVV---- 450 (505)
Q Consensus 385 ~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~---- 450 (505)
.|+++|..+.. ..+.++|.|.|++ +.+.+|+|++|+|+|+..+...+....... ......+.+
T Consensus 86 ~~~~~~~~~~~-~~~~~sv~l~W~~--P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (232)
T 4go6_B 86 GFPGAPCAIKI-SKSPDGAHLTWEP--PSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSS 162 (232)
T ss_dssp TSCCCCEEEEE-EEETTEEEEEEEC--CSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHH
T ss_pred CCCCCCeeeEE-ecCCCEEEEEEeC--CCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccc
Confidence 66667765554 4567899999998 556788999999999987633322111100 001112222
Q ss_pred ---EcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 451 ---RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 451 ---~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
.+.+|.+++.|.|||+|+|.+|.|++|++....+.+
T Consensus 163 l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 163 LSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp HTTBCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred cEEeeecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 346788999999999999999999999977665543
No 215
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.81 E-value=4.2e-19 Score=146.48 Aligned_cols=156 Identities=17% Similarity=0.249 Sum_probs=116.8
Q ss_pred eEEeeCCCeEEEEeecCC--CCCCeEEEEECCEEec----------CCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 98 ETYAGEGGNVTIFCNPEA--APKPKFVWKKDGNIIG----------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~--~p~~~i~W~~~g~~~~----------~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
.+.+.+|+++.|.|...+ .+.+.|.|+|++..+. ...++.+..+++|.|.+++.+|+|.|+|.+.|..
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence 356789999999996433 4566999999997542 3456677677889999999999999999999999
Q ss_pred Cce--eeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeE
Q psy14886 166 GMD--ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 243 (505)
Q Consensus 166 g~~--~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (505)
|.. ...+.|.|..++.. +. ....+..+.|.|.+.+.|.| .+.|+++|..+.... .+
T Consensus 85 g~~~~~~~~~l~V~~~~~~-----p~-i~~~~~~v~L~C~~~g~p~p--~i~W~~~g~~l~~~~--------------~~ 142 (176)
T 1hng_A 85 GTRILNKALDLRILEMVSK-----PM-IYWECSNATLTCEVLEGTDV--ELKLYQGKEHLRSLR--------------QK 142 (176)
T ss_dssp CCEEEEEEEEEEEECCCCC-----CE-EEEETTTTEEEEECSSCSSC--EEEEEETTEEEEEES--------------SS
T ss_pred CCEEEEEEEEEEEeCCCCC-----CE-EEecCCcEEEEEEecCCCCc--EEEEEECCEECCCCC--------------cE
Confidence 886 55677777654321 11 12234469999999988764 677999998875421 13
Q ss_pred EEecCCCCCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 244 EITNASFADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 244 ~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
.+..+..+|.|.|+|.|.|..|.......|.+
T Consensus 143 ~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 143 TMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 34456689999999999999998877765543
No 216
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.81 E-value=7.5e-19 Score=158.39 Aligned_cols=186 Identities=14% Similarity=0.083 Sum_probs=121.4
Q ss_pred CCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeE
Q psy14886 279 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 358 (505)
Q Consensus 279 p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~ 358 (505)
..+|.++.+... ...+.|+|+++.+...++. |.|+|+..+...|.....-.. .......+....|.++..|.
T Consensus 4 l~~P~nv~~~~~-n~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~------~~~~~c~lt~~~l~~~~~Y~ 75 (306)
T 3s98_A 4 LKSPQKVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQN------ITSTKCNFSSLKLNVYEEIK 75 (306)
T ss_dssp ----CCCEEEEE-TTEEEEECC--------CE-EEEEEEESSCSSCEECTTCSS------BSSSEEECCC---CTTSCEE
T ss_pred CCCCcEeEEEEE-CCeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccC------CCCCEEEccccccCCCCcEE
Confidence 346788888765 5567899999987666665 999999988888987521110 00111111112378999999
Q ss_pred EEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCcccc-----CCCCceEEEEEEEcCCCC
Q psy14886 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ-----NAPNIYYKIFWRKKNDTE 433 (505)
Q Consensus 359 ~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~-----~~~i~~Y~v~~~~~~~~~ 433 (505)
|||+|.| .|.|+++... .+.+....+++||. +.+... .++|.|.|+| +...+ +|.+++|+|.|++.+...
T Consensus 76 ~rV~A~n-~~~S~~s~~~-~f~~~~~~~~~pP~-v~~~~~-~~si~v~w~P-~~~~~~~~~~~g~~l~Y~v~y~~~~~~~ 150 (306)
T 3s98_A 76 LRIRAEK-ENTSSWYEVD-SFTPFRKAQIGPPE-VHLEAE-DKAIVIHISP-GTKDSVMWALDGLSFTYSLVIWKNSSGV 150 (306)
T ss_dssp EEEEEEC-SSCEEEEECC-CBCHHHHCBCCCCE-EEEEEC-SSCEEEEEEC-C---CCCC-----CCEEEEEEEETTTCC
T ss_pred EEEEEEe-CCcCCCEeee-eEechhhCccCCCe-EEEEEc-CCEEEEEEEC-CCCCCcceeccCCcEEEEEEEEECCCCC
Confidence 9999999 8877665432 55555556677786 776643 4689999995 33322 578999999999987443
Q ss_pred -cEEEEeeecCceeeEEEEcCCccceeeEEEEEEEec--CCCCCCCCceEEEee
Q psy14886 434 -FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN--DVGPGPESEVVTIWH 484 (505)
Q Consensus 434 -~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n--~~G~g~~s~~~~~~t 484 (505)
|.. . . ....+.|.+|.|++.|.|+|+|+| .+|.|++|+.+.+.|
T Consensus 151 ~~~~-~--~----~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T 197 (306)
T 3s98_A 151 EERI-E--N----IYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKT 197 (306)
T ss_dssp CEEE-E--E----ECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEEC
T ss_pred eEEE-e--c----ccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEe
Confidence 431 1 1 235788999999999999999999 789999999999887
No 217
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.81 E-value=3.9e-19 Score=150.95 Aligned_cols=170 Identities=15% Similarity=0.171 Sum_probs=121.2
Q ss_pred ceEEeeCCCeEEEEeecCCCCC-----CeEEEEE-CCEEecCCCcEEEeeC------CCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPK-----PKFVWKK-DGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~-----~~i~W~~-~g~~~~~~~~~~~~~~------~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
..+.+.+|+++.|.|.+.+.|. +.+.|++ ++.......+..+..+ .+|.|.+++.+|+|.|+|.+.+.
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 89 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG 89 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence 4567899999999999998876 7999999 5544444455555433 46999999999999999999999
Q ss_pred CCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecC---C
Q psy14886 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---G 241 (505)
Q Consensus 165 ~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~---~ 241 (505)
.+.....+.|.|...+..... ....+..|+.+.|.|.+.+.|.| .+.|++++..+... ...... .
T Consensus 90 ~~~~~~~~~l~V~~~~~~p~~--~~~~~~~g~~v~l~C~~~g~P~p--~v~W~~~~~~~~~~--------~~~~~~~~~~ 157 (202)
T 3bp6_B 90 AAWDYKYLTVKVKASYMRIDT--RILEVPGTGEVQLTCQARGYPLA--EVSWQNVSVPANTS--------HIRTPEGLYQ 157 (202)
T ss_dssp TEEEEEEEEEEEEBCCCCEEE--EEEECTTTCCEEEEEEEEEBSCC--EEEETTCCSCCEEE--------EEECTTSCEE
T ss_pred CCcceEEEEEEecCCCCcccE--EEEecCCCCeEEEEEEccccCCc--eEEEEeCCCCccCc--------eeeCCCCCEE
Confidence 887777788888765422111 01134578999999999887765 56799876543221 011111 2
Q ss_pred eEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCC
Q psy14886 242 LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 278 (505)
Q Consensus 242 ~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~ 278 (505)
.+.+..+..+|.|.|+|.|.|..|.....+.+.+..+
T Consensus 158 ~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 158 VTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp EEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred EEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 3456677888999999999999999988888877543
No 218
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.81 E-value=8.2e-19 Score=149.73 Aligned_cols=174 Identities=19% Similarity=0.316 Sum_probs=126.2
Q ss_pred EEeeCCCeEEEEeecCCCCCCeEEEEECCEEec-------------------CCCcEEEeeCCCEEEcCCCCCCCEEEEE
Q psy14886 99 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-------------------SGGRRKIFENGNLLISPVSRDDSGIYSC 159 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~-------------------~~~~~~~~~~~~l~i~~v~~~d~G~y~C 159 (505)
..+.+|+++.|.|...+.+.+.+.|++++.... ...+..+..+++|.|.+++..|+|.|+|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C 88 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTL 88 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEE
T ss_pred ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEE
Confidence 458899999999998888888999998753211 1235555556789999999999999999
Q ss_pred EEEcCC-CceeeeEEEEEEeCCe--eeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCee
Q psy14886 160 TATNVH-GMDESKGRLIVLHGPS--YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236 (505)
Q Consensus 160 ~~~~~~-g~~~~~~~l~v~~~p~--~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 236 (505)
.+.+.. +.....+.|.|..++. .+.... .. +..|+.+.|.|.+.+.+ + .+.|++++..+.... ....
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-~~-~~~g~~v~l~C~~~~~p-p--~i~W~~~g~~l~~~~-----~~~~ 158 (208)
T 3r4d_A 89 DMTDENYRRTQATVRFHVHQPVTQPFLQVTN-TT-VKELDSVTLTCLSNDIG-A--NIQWLFNSQSLQLTE-----RMTL 158 (208)
T ss_dssp EEECSSCEEEEEEEEEEEECCCCCCEEEESC-SS-CCTTCCEEEEEECSCTT-C--EEEEEETTEECCCCS-----SEEE
T ss_pred EEEcccCceeEEEEEEEeccCCCCCEEecCC-ce-EeeCCCEEEEEECCCCC-C--ceEEEECCEeCCCCC-----CeEE
Confidence 999985 4445557788865432 222222 22 77899999999998854 3 678999998886532 1233
Q ss_pred eecCCeEEEecCCCCCCEEEEEEEEecCCcEE-EEEEEEEcCCCCCC
Q psy14886 237 NIDGGLLEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLP 282 (505)
Q Consensus 237 ~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~-~~~~l~v~~~p~~p 282 (505)
...+..|.|..+..+|.|.|+|.|.|..|... ..++|.|..+|..+
T Consensus 159 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~~ 205 (208)
T 3r4d_A 159 SQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHHH 205 (208)
T ss_dssp ETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC------
T ss_pred cCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCccc
Confidence 33457899999999999999999999999854 56778777766543
No 219
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.80 E-value=7e-19 Score=146.88 Aligned_cols=161 Identities=18% Similarity=0.295 Sum_probs=123.1
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECCEE--ecC------------CCcEEEe----e--CCCEEEcCCCCCCCEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IGS------------GGRRKIF----E--NGNLLISPVSRDDSGI 156 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~--~~~------------~~~~~~~----~--~~~l~i~~v~~~d~G~ 156 (505)
..+.+.+|+++.|.|.+.+.|.+.+.|++++.. +.. ..+.... . ..+|.|.+++.+|+|.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 346789999999999999888899999998752 210 1222222 1 2359999999999999
Q ss_pred EEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCee
Q psy14886 157 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236 (505)
Q Consensus 157 y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 236 (505)
|+|.+.+..+ .+.|.|...+ . +....+..|+.+.|.|.+.+.|.+ .+.|++++..+
T Consensus 83 Y~C~~~~~~~----~~~l~V~~~~----~-~~~~~v~~g~~~~l~C~~~~~p~~--~v~W~~~~~~~------------- 138 (184)
T 2ny1_B 83 YICEVEDQKE----EVQLLVFGLT----A-NSDTHLLQGQSLTLTLESPPGSSP--SVQCRSPRGKN------------- 138 (184)
T ss_dssp EEEEETTEEE----EEEEEEEEEE----E-SSCSEEETTCCEEEEEECCTTCCC--EEEEECTTSCE-------------
T ss_pred EEEEEEcCCC----cEEEEEEEec----C-CCCceeecCCCEEEEEEcCCCCCC--EEEEEeCCCcc-------------
Confidence 9999987643 4556664311 1 334577899999999999887644 67799876443
Q ss_pred eecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCC
Q psy14886 237 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 281 (505)
Q Consensus 237 ~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~ 281 (505)
......|.|..+..+|.|.|+|.|.|..+..+..+.|.|.+.|.+
T Consensus 139 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 139 IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp EEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC-
T ss_pred ccCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCC
Confidence 234578999999999999999999999999999999999988764
No 220
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.80 E-value=8.8e-19 Score=155.60 Aligned_cols=227 Identities=13% Similarity=0.140 Sum_probs=152.5
Q ss_pred EeeCCCeEEEEeecCC-CCCC--eEEEEECCEEecCCCcEEEeeCCCEEEcCC---CCCCCEE--EEEEEEcCCCceeee
Q psy14886 100 YAGEGGNVTIFCNPEA-APKP--KFVWKKDGNIIGSGGRRKIFENGNLLISPV---SRDDSGI--YSCTATNVHGMDESK 171 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~-~p~~--~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v---~~~d~G~--y~C~~~~~~g~~~~~ 171 (505)
.+.+|+.++|.|.+.+ .|.+ .+.|+++|..+.. .....++.+.+..+ +..|.|. |+|.+.|..|.....
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~---~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~ 90 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETL 90 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC---EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc---eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEE
Confidence 5889999999999988 6766 9999999998764 22233445666555 6778885 999999999988888
Q ss_pred EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCC
Q psy14886 172 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 251 (505)
Q Consensus 172 ~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 251 (505)
+.|.|...|..... .....+..|+.+.|.|.+. +. ..+.| +|..+.... ....|.+..+..+
T Consensus 91 ~~l~V~~~p~p~~~-~~~~~v~~G~~v~l~C~~~--p~--~~i~W--~g~~~~~~~-----------~~~~l~i~~~~~~ 152 (265)
T 2oz4_A 91 QTVTIYSFPAPNVI-LTKPEVSEGTEVTVKCEAH--PR--AKVTL--NGVPAQPLG-----------PRAQLLLKATPED 152 (265)
T ss_dssp EEEEEECCCCCEEE-ESCSEEETTCEEEEEEECC--TT--SEEEE--SSCSSSCCS-----------SEECCEEECCGGG
T ss_pred EEEEEeCCCCceee-cCCceecCCCcEEEEEEcc--CC--CEEEE--CCEEccCCC-----------CcEEEEEcccccc
Confidence 89999764443222 2345678899999999988 44 46678 665552211 1245778888889
Q ss_pred CCEEEEEEEEecC-CcEE---EEEEEEEcCCCCCCCc---eEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCe
Q psy14886 252 DAGEYECVVKSTV-GKIS---TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 324 (505)
Q Consensus 252 ~~g~y~C~~~n~~-g~~~---~~~~l~v~~~p~~p~~---~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w 324 (505)
+.|.|+|.|.|.. |... ..+.|.|..+|..... -......+..+.|.|.. .+.|...+. |
T Consensus 153 ~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~---~g~P~p~i~----------W 219 (265)
T 2oz4_A 153 NGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQA---WGNPLPELK----------C 219 (265)
T ss_dssp TTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCC---EEESCCEEE----------E
T ss_pred CCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeEC---ccCCCCeEE----------E
Confidence 9999999998544 7655 6677888776654321 13344567788888862 222222232 2
Q ss_pred EEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 325 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
........ ... .+.. +...+.+.|+|.|.|..|...
T Consensus 220 ~~~~~~~~--------~~g--~~~~-v~~~d~G~Y~C~a~N~~G~~~ 255 (265)
T 2oz4_A 220 LKDGTFPL--------PIG--ESVT-VTRDLEGTYLCRARSTQGEVT 255 (265)
T ss_dssp EETTTEEC--------CTT--SCEE-CCGGGCEEEEEEEEETTEEEE
T ss_pred EECCcccC--------CCC--cEEE-eehhhCeEEEEEEECCCCcEE
Confidence 22111000 011 1123 777899999999999998653
No 221
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.80 E-value=1.5e-18 Score=142.84 Aligned_cols=156 Identities=20% Similarity=0.290 Sum_probs=119.7
Q ss_pred ceEEeeCCCeEEEEeecCCCC-CCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
....+.+|+++.|.|.+.+.| .+.+.|+++|..+... ...+.+.++...|+|.|+|.+.+... ...+.|.
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~-------~~~~~~~~~~~~d~G~Y~C~~~~~~~--s~~~~l~ 82 (170)
T 3ry4_A 12 PWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH-------TQPSYRFKANNNDSGEYTCQTGQTSL--SDPVHLT 82 (170)
T ss_dssp CCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC-------CSSEEEEECCGGGCEEEEEEETTSBC--CCCEEEE
T ss_pred CCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC-------ccceEEEecccccCeEEEEEEeCCCc--eEeEEEE
Confidence 334688999999999999886 5699999999988653 34577889999999999999986433 3457777
Q ss_pred EEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEE
Q psy14886 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 255 (505)
Q Consensus 176 v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 255 (505)
|..++.... .....+..|+.+.|.|.+.+.++ ...+.|++++..+... .....|.|..+..+|.|.
T Consensus 83 v~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~g~~~~~~-----------~~~~~L~i~~v~~~d~G~ 148 (170)
T 3ry4_A 83 VLFEWLVLQ--TPHLEFQEGETIMLRCHSWKDKP-LVKVTFFQNGKSQKFS-----------HLDPTFSIPQANHSHSGD 148 (170)
T ss_dssp EECCSEEEE--CSCSEECTTCCEEEEEEEGGGCC-EEEEEEEETTEEEEEE-----------SSCCEEEESSCCGGGCEE
T ss_pred EECCceEec--CCCceeecCCeEEEEEECCCCCC-CceEEEEECCeEcccc-----------CCCCeEEEEeccccCCEE
Confidence 776654433 33456788999999999965543 3578899999876431 135679999999999999
Q ss_pred EEEEEEecCCc-EEEEEEEEE
Q psy14886 256 YECVVKSTVGK-ISTKTTVIV 275 (505)
Q Consensus 256 y~C~~~n~~g~-~~~~~~l~v 275 (505)
|+|.|.|..|. .+..+.|.|
T Consensus 149 Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 149 YHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEeCcCccccccEEEEE
Confidence 99999999886 344455554
No 222
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.80 E-value=6.1e-20 Score=159.63 Aligned_cols=163 Identities=18% Similarity=0.269 Sum_probs=113.2
Q ss_pred CCCCCceEEEEEEeccCC-CeEEEEECCEECcCCCC------CCCCCCcEE----------E-ECCeEEEEcCCCCCCCe
Q psy14886 1 MDNQADLTWTCEAFGVPD-VTYSWFRNGELLNSETL------PLEDQDRYF----------I-QDNVLTIRYLNPERDPA 62 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~-~~~~W~~~~~~l~~~~~------~~~~~~~~~----------~-~~~~L~i~~~~~~~d~G 62 (505)
+.+|++++|.|.+.+.+. +.+.|+|++.......+ ......++. + .++.|.|.+++ .+|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~-~~D~G 90 (231)
T 2pet_A 12 VMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ-VGDER 90 (231)
T ss_dssp EETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC-GGGCE
T ss_pred EEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC-cccCc
Confidence 358999999999998885 89999986543110000 000012222 3 23569999999 99999
Q ss_pred EEEEEEEccc-CceEeeEEEEEEecCCCccCCCCCceEEeeCCCeE-EEEeec-CCCCCCeEEEEECCEEecCCC----c
Q psy14886 63 MYQCRAKNQL-KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV-TIFCNP-EAAPKPKFVWKKDGNIIGSGG----R 135 (505)
Q Consensus 63 ~Y~C~~~~~~-~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v-~l~C~~-~~~p~~~i~W~~~g~~~~~~~----~ 135 (505)
.|+|.+.+.. +.....+.|.|...+.............+.+|+.+ .|.|.+ .+.|.+.+.|+++|..+.... +
T Consensus 91 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~ 170 (231)
T 2pet_A 91 DYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPE 170 (231)
T ss_dssp EEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSS
T ss_pred eEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccc
Confidence 9999999876 66667788888863322221222233446789988 999999 888999999999999887554 3
Q ss_pred EEEeeC------------CCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 136 RKIFEN------------GNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 136 ~~~~~~------------~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
..+... +.|.|.....+|.|.|+|.|.|.
T Consensus 171 ~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 171 GYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred eeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 333221 34777755566799999999994
No 223
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.80 E-value=1.9e-19 Score=152.59 Aligned_cols=152 Identities=14% Similarity=0.245 Sum_probs=106.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcE--EEECCeEEEEcCCCCCCCeEEEEEEEcccC-----
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRY--FIQDNVLTIRYLNPERDPAMYQCRAKNQLK----- 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~--~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~----- 73 (505)
|.+|++++|.|.+.+ +.+.+.|+|+|..+..... ..+. ...++.|.|.+++ .+|+|.|+|.+.+...
T Consensus 19 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~----~~~~~~~~~~~~l~I~~v~-~~D~G~Y~C~a~~~~~~~~~~ 92 (201)
T 1nkr_A 19 VKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRL----IGEHHDGVSKANFSISRMT-QDLAGTYRCYGSVTHSPYQVS 92 (201)
T ss_dssp EETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEE----ECEEETTEEEEEEEESSCC-GGGCEEEEEEEEBTTBTTCCC
T ss_pred cCCCCcEEEEEeccC-CCCEEEEEECCCcCCccee----eeecCCCCceEEEEeccCC-cccCeEEEEeEecCCCCcccc
Confidence 458999999999974 6789999999876541100 0001 1235689999999 9999999999986421
Q ss_pred ceEeeEEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEee----CCCEEEc
Q psy14886 74 TRYSSAQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----NGNLLIS 147 (505)
Q Consensus 74 ~~~~~~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~----~~~l~i~ 147 (505)
.....+.|.|... +|.+...+ . ..+.+|++++|.|.+.+ +.+.+.|+|+|..+.......... .+.|.|.
T Consensus 93 ~~s~~~~l~V~~~~~~p~i~~~p--~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~ 168 (201)
T 1nkr_A 93 APSDPLDIVIIGLYEKPSLSAQP--G-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLG 168 (201)
T ss_dssp CCCCCEEEEEECSSCCCEEEEES--C-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEE
T ss_pred CCCCCEEEEeeccCCCCceecCC--C-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeC
Confidence 1233467777753 24443333 1 35889999999999886 467999999997664321111111 4569999
Q ss_pred CCCCCCCEEEEEEEEcC
Q psy14886 148 PVSRDDSGIYSCTATNV 164 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~ 164 (505)
+++ |+|.|+|.|.+.
T Consensus 169 ~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 169 PAT--HGGTYRCFGSFH 183 (201)
T ss_dssp ECC--SCEEEEEEEEET
T ss_pred CcC--CCeeEEEEEEcC
Confidence 998 999999999864
No 224
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.80 E-value=1.9e-18 Score=151.79 Aligned_cols=174 Identities=17% Similarity=0.244 Sum_probs=115.9
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc----CC------CCCCCCCCcEEEEC------CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN----SE------TLPLEDQDRYFIQD------NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~----~~------~~~~~~~~~~~~~~------~~L~i~~~~~~~d 60 (505)
|.+|++++|.|.+.+.| .+.|.|+|++ ..+. .. .......+|+.+.. .+|.|.+++ .+|
T Consensus 14 v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~D 92 (247)
T 2ghw_B 14 VQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR-AED 92 (247)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred EecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC-HHH
Confidence 46899999999999876 6889999942 1110 00 00001235666532 379999999 999
Q ss_pred CeEEEEEEEcccCc--eEeeEEEEEEec--------------CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEE
Q psy14886 61 PAMYQCRAKNQLKT--RYSSAQLRVLTL--------------KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWK 124 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~--~~~~~~l~v~~~--------------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~ 124 (505)
+|.|+|.+.|..+. ....+.|.|... ++.+... +....+.+|++++|.|.+.+.+.+.+.|+
T Consensus 93 ~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~v~W~ 170 (247)
T 2ghw_B 93 TAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQS--PATLSLSPGERATLSCRASQSVRSNLAWY 170 (247)
T ss_dssp CEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEE--CSEEEECTTSCEEEEEEESSCCTTCEEEE
T ss_pred CEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEcc--CCEEEecCCCcEEEEEEeCCCccceEEEE
Confidence 99999999986322 122356777642 1112211 24566899999999999999988899999
Q ss_pred E--CCEEec------------CCCcEEEeeC---CCEEEcCCCCCCCEEEEEEEEcCCCceee-eEEEEEE
Q psy14886 125 K--DGNIIG------------SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVL 177 (505)
Q Consensus 125 ~--~g~~~~------------~~~~~~~~~~---~~l~i~~v~~~d~G~y~C~~~~~~g~~~~-~~~l~v~ 177 (505)
+ ++..+. ...++..... .+|.|.++..+|+|.|+|.|.+....... ...|.|.
T Consensus 171 k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 171 QQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 9 554321 1234443322 24999999999999999999876443332 2455553
No 225
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.80 E-value=1.4e-18 Score=148.95 Aligned_cols=162 Identities=18% Similarity=0.282 Sum_probs=111.3
Q ss_pred CCCCCceEEEEEEecc-------CCCeEEEEECCEECcC------CC----CCCCCCCcEEEEC------CeEEEEcCCC
Q psy14886 1 MDNQADLTWTCEAFGV-------PDVTYSWFRNGELLNS------ET----LPLEDQDRYFIQD------NVLTIRYLNP 57 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~-------p~~~~~W~~~~~~l~~------~~----~~~~~~~~~~~~~------~~L~i~~~~~ 57 (505)
+.+|++++|.|.+.+. +.+.+.|+|++..... .. ......+|+.+.. .+|.|.+++
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~- 90 (214)
T 2zg1_A 12 VQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDAR- 90 (214)
T ss_dssp EETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCC-
T ss_pred EecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCC-
Confidence 3589999999999754 4788999998653110 00 0112346776632 479999999
Q ss_pred CCCCeEEEEEEEcccCceE----eeEEEEEEecC--CCccCCCCCceEEeeCCCeEEEEeecCCC----CCCeEEEEECC
Q psy14886 58 ERDPAMYQCRAKNQLKTRY----SSAQLRVLTLK--PSFKKRPLESETYAGEGGNVTIFCNPEAA----PKPKFVWKKDG 127 (505)
Q Consensus 58 ~~d~G~Y~C~~~~~~~~~~----~~~~l~v~~~~--p~~~~~~~~~~~~v~~g~~v~l~C~~~~~----p~~~i~W~~~g 127 (505)
.+|+|.|+|.+.+..+... ..+.|.|...+ |.+.. + . .+.+|+.++|.|.+.+. |.+.+.|++++
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~--~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~ 165 (214)
T 2zg1_A 91 MEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-L--E--PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNA 165 (214)
T ss_dssp GGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC-----C--CCCTTCCEEEEEECTTCCSCSSCCEEEEESST
T ss_pred HhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-C--c--cccCCCeEEEEEEeccCCCCCCCceEEEeCCC
Confidence 9999999999997653222 35777777532 33322 1 1 26789999999999774 78899999988
Q ss_pred EEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeee
Q psy14886 128 NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK 171 (505)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~ 171 (505)
..+... . ....+.|.|..+..+|+|.|+|.|.|..+.....
T Consensus 166 ~~~~~~-~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~ 206 (214)
T 2zg1_A 166 LSPLDP-E--TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTE 206 (214)
T ss_dssp TSSSCS-S--CCCSSEEEECCCTTCCSCEEEEEEECC----CCE
T ss_pred CccCCC-C--ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceE
Confidence 654321 1 1335679999999999999999999976544333
No 226
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.80 E-value=6.3e-20 Score=157.33 Aligned_cols=168 Identities=21% Similarity=0.292 Sum_probs=115.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEECc-----CCCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GELLN-----SETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~-----~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.+.|+|. +.... .........+|+... ..+|.|.+++ .+|+|.|+|.+.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 90 (213)
T 3mj8_L 12 VALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQ-AGDEADYYCQSW 90 (213)
T ss_dssp EETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCC-GGGCEEEEEEEE
T ss_pred EeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCC-hhhCEEEEEEec
Confidence 46899999999999888999999992 22111 000111123466532 3479999999 999999999999
Q ss_pred cccC---ceEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCCCc----E-
Q psy14886 70 NQLK---TRYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGGR----R- 136 (505)
Q Consensus 70 ~~~~---~~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~----~- 136 (505)
+..+ .....+.|.|.. .+|.+...+. ...+.+|+.++|.|.+.+. |+ +.+.|+++|..+..+.. .
T Consensus 91 ~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 168 (213)
T 3mj8_L 91 DGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPP--SSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSK 168 (213)
T ss_dssp ETTTTEEEEBCCEEEEEECSCCBCCEEEEECC--CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE
T ss_pred cCCcceeEEcCceEEEEeCCCCCCCeEEccCC--CcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCc
Confidence 8877 234457777773 2444443331 1224479999999999885 33 49999999998864210 0
Q ss_pred ---EEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeee
Q psy14886 137 ---KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK 171 (505)
Q Consensus 137 ---~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~ 171 (505)
.......|.|.++..+|.|.|+|.|.|..+.....
T Consensus 169 ~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 206 (213)
T 3mj8_L 169 SDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKS 206 (213)
T ss_dssp ETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEee
Confidence 11112348899999999999999999987554443
No 227
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.80 E-value=4.6e-20 Score=167.93 Aligned_cols=172 Identities=18% Similarity=0.250 Sum_probs=127.6
Q ss_pred CCCCceEEEEEE-eccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceE--ee
Q psy14886 2 DNQADLTWTCEA-FGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY--SS 78 (505)
Q Consensus 2 ~~G~~~~l~C~~-~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~--~~ 78 (505)
.+|+.+.|.|.+ .+.|.+.|+|+|++.++........ .......+.|.|..++ .+|+|.|+|.|.|..+... ..
T Consensus 127 ~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~--~~~~~~~s~l~i~~~~-~~d~g~Y~C~a~n~~~~~~~~~~ 203 (308)
T 4fom_A 127 GGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFP--NETATIISQYKLFPTR-FARGRRITCVVKHPALEKDIRYS 203 (308)
T ss_dssp TCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECT--TSCEEEEEEEEECCCG-GGTTCEEEEEEECTTCSSCEEEE
T ss_pred cCCceEEEEEEecCCcCCceEEEEECCcccccccceee--eecccccccceEEeee-ecCCccEEEEEEccCCCCceEEe
Confidence 468899999986 5789999999999987753211110 1111223579999999 9999999999999776543 34
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCC-eEEEEECCEEecCCCcEEEeeCC-CEEEcCCCCCCCEE
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGI 156 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~i~W~~~g~~~~~~~~~~~~~~~-~l~i~~v~~~d~G~ 156 (505)
+.|.|.. +|.+...+. ....+.+|+.++|.|.+.|.|.+ .+.|++++..+.... ...++ .|.|.+++.+|+|.
T Consensus 204 ~~l~V~~-~P~~~~~~~-~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~---~~~~~~~l~i~~v~~~d~G~ 278 (308)
T 4fom_A 204 FILDIQY-APEVSVTGY-DGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGL---LASDNTLHFVHPLTFNYSGV 278 (308)
T ss_dssp EECCCCE-EEEECCBCC-CSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSC---BCSTTEEECCSCCCSCCCSE
T ss_pred EEEEEec-CCeeEEccc-ceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcE---EEcCCeEEEECCCChhhCEE
Confidence 5566664 555554442 33457789999999999999888 799999987765432 11233 35678899999999
Q ss_pred EEEEEEcCCCceeeeEEEEEEeCCe
Q psy14886 157 YSCTATNVHGMDESKGRLIVLHGPS 181 (505)
Q Consensus 157 y~C~~~~~~g~~~~~~~l~v~~~p~ 181 (505)
|+|.|.|..|.....+.|.|.++|.
T Consensus 279 Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 279 YICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp EEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 9999999999999999999987764
No 228
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.80 E-value=5e-19 Score=148.61 Aligned_cols=157 Identities=20% Similarity=0.223 Sum_probs=110.0
Q ss_pred CCCCceEEEEEEec-cCCCeEEEEECCEECcC---CCCC-----C---CCCCcEEE-ECCeEEEEcCCCCCCCeEEEEEE
Q psy14886 2 DNQADLTWTCEAFG-VPDVTYSWFRNGELLNS---ETLP-----L---EDQDRYFI-QDNVLTIRYLNPERDPAMYQCRA 68 (505)
Q Consensus 2 ~~G~~~~l~C~~~~-~p~~~~~W~~~~~~l~~---~~~~-----~---~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~~ 68 (505)
.+|++++|.|.+.+ .+.+.|.|+|++..+.. .... . ...+|+.+ .+++|.|.+++ .+|+|.|+|.+
T Consensus 11 ~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~-~~D~G~Y~C~~ 89 (193)
T 2if7_A 11 ILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLK-MEDTGSYRAQI 89 (193)
T ss_dssp ETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCC-GGGCEEEEEEE
T ss_pred EecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCC-cccCceEEEEE
Confidence 58999999999975 45579999999875521 0000 0 01135544 46789999999 99999999999
Q ss_pred EcccCceEeeEEEEEEecCC--CccCCCCCceEEeeCCC-eEEEEeecCCC-CCCeEEEEECCEEecCCCcEEEeeCCCE
Q psy14886 69 KNQLKTRYSSAQLRVLTLKP--SFKKRPLESETYAGEGG-NVTIFCNPEAA-PKPKFVWKKDGNIIGSGGRRKIFENGNL 144 (505)
Q Consensus 69 ~~~~~~~~~~~~l~v~~~~p--~~~~~~~~~~~~v~~g~-~v~l~C~~~~~-p~~~i~W~~~g~~~~~~~~~~~~~~~~l 144 (505)
.+..+.....+.|.|...++ .+.... .....|. .++|.|.+.+. |.+.+.|+++|..+.. ...|
T Consensus 90 ~~~~~~~~~~~~L~V~~~~~~p~i~~~~----~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~--------~~~l 157 (193)
T 2if7_A 90 STKTSAKLSSYTLRILRQLRNIQVTNHS----QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS--------QPNL 157 (193)
T ss_dssp ECSSCEEEEEEEEEEECCCEEEEEEECC----C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES--------SSEE
T ss_pred EecCCCeEEEEEEEEEccCCCCeEecCc----eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC--------CCeE
Confidence 98887766677888875322 222111 1133465 89999999885 5789999999987643 2346
Q ss_pred EEcCCCCC-CCEEEEEEEEcCCCceeee
Q psy14886 145 LISPVSRD-DSGIYSCTATNVHGMDESK 171 (505)
Q Consensus 145 ~i~~v~~~-d~G~y~C~~~~~~g~~~~~ 171 (505)
.|...... |.|.|+|.|.|..|..+..
T Consensus 158 ~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 158 TVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp EEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred EEEeccCcCCCCcEEEEEECCCCccccc
Confidence 66544454 8999999999998876443
No 229
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=2.2e-19 Score=138.93 Aligned_cols=121 Identities=23% Similarity=0.211 Sum_probs=102.5
Q ss_pred EEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEe
Q psy14886 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 439 (505)
Q Consensus 360 ~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~ 439 (505)
+|.|.|..|.|.+|... .+.|.+..|+.+|.++.+...+.++|.|.|++|.....++.|.+|+|+|+..+...|... .
T Consensus 3 ~V~A~n~~G~g~~s~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-~ 80 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDI-TVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET-L 80 (124)
T ss_dssp SCCCCCCCCCCCCCCCC-CCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE-E
T ss_pred eEEEEeCCccCCCCCCE-EEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE-e
Confidence 57899999999887765 778888888889999999888899999999996544489999999999999886666533 1
Q ss_pred eecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 440 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 440 ~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
. ...+.+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.++|..
T Consensus 81 ~----~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 81 E----PNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp C----SSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred c----CCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 1 234678899999999999999999999999999999998864
No 230
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.79 E-value=6.7e-19 Score=158.95 Aligned_cols=258 Identities=14% Similarity=0.191 Sum_probs=162.3
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeC---CCEEEcCCCCCCCEEEEEEEEc
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISPVSRDDSGIYSCTATN 163 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~---~~l~i~~v~~~d~G~y~C~~~~ 163 (505)
+|.+...+ ....+.+|+++.|.|.+.+. +.|++++.. ....... +.|.|.+++..|+|.|+|.+.|
T Consensus 4 ~P~i~~~~--~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 72 (292)
T 4dkd_C 4 IPVIEPSV--PELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPG 72 (292)
T ss_dssp CCEEESCC--SSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC
T ss_pred CceecCCC--CeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEcc
Confidence 55555544 45679999999999999874 999976532 1122222 3699999999999999999999
Q ss_pred CCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeC-CEEecCCCCCcccCCeeeecCCe
Q psy14886 164 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN-GVRIGNMDLNELETPNINIDGGL 242 (505)
Q Consensus 164 ~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~ 242 (505)
..+.....+.|.|..+|......+....+..|+.+.|.|.+.+ +.+...+.|+++ +..+.... .........
T Consensus 73 ~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~------~~~~~~~~~ 145 (292)
T 4dkd_C 73 DPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHT------NYSFSPWHG 145 (292)
T ss_dssp ----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSC------CEECCSSSC
T ss_pred CCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCC------cccccCCce
Confidence 8888777888888877765555566778899999999999987 442245679886 43332211 112223445
Q ss_pred EEEecCCCCCCEEEEEEEEecCCcEE-EEEEEEEcCCCC-CCCceEEE-----EEeCCeEEEEeecCCCCCCCCceEEEE
Q psy14886 243 LEITNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPG-LPGGVQVV-----EVHKTSATIQWTDGATNGRPITHYKII 315 (505)
Q Consensus 243 l~i~~~~~~~~g~y~C~~~n~~g~~~-~~~~l~v~~~p~-~p~~~~~~-----~~~~~~v~l~w~~~~~~~~~i~~y~v~ 315 (505)
|.|..+..+|.|.|+|.+.|..|... ..+.|.|...+. +|. +... ...+..+.|.|... +.+. .+.+.
T Consensus 146 L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~-i~~~~~~~~~~~g~~v~l~C~~~---~~~~-~~~~~ 220 (292)
T 4dkd_C 146 FTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPA-LTLVPAELVRIRGEAAQIVCSAS---SVDV-NFDVF 220 (292)
T ss_dssp CEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCE-EEEESSCBCCCSSSCEEEEEEEE---ESSS-CCEEE
T ss_pred EEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCe-EEccCCceeEecCCCEEEEEEec---CCCC-ceEEE
Confidence 99999999999999999998877654 377888875332 221 2221 13566788888743 1111 12222
Q ss_pred EEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 316 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
+...+...-........ ...+.....+.+.+ +...+.+.|+|.|.|..|...
T Consensus 221 w~~~~~~~~~~~~~~~~---~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~g~~~ 272 (292)
T 4dkd_C 221 LQHNNTKLAIPQQSDFH---NNRYQKVLTLNLDQ-VDFQHAGNYSCVASNVQGKHS 272 (292)
T ss_dssp CCBSSCCCCCCBEEEEE---TTEEEEEEEEEESS-CCTTSCEEEEEEEECSSCEEE
T ss_pred EeCCCcccccCccceec---cceeeeEEEEEECc-cChhcCeEEEEEEecCCCCce
Confidence 22221110000000000 00011112344444 899999999999999999764
No 231
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.79 E-value=6.2e-21 Score=176.46 Aligned_cols=206 Identities=17% Similarity=0.183 Sum_probs=146.9
Q ss_pred CCeEEEEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC-CcEEE
Q psy14886 60 DPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKI 138 (505)
Q Consensus 60 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~-~~~~~ 138 (505)
+.|.|+|.+.+.... +.+.+ ..+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+... .....
T Consensus 136 ~~~~~~C~~~~~l~~----l~~~~-c~~P~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~ 208 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAH----MPNAS-CGVPTLKVQV--PNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGG 208 (347)
T ss_dssp GGGCCCCSSSSCSSC----CCCTT-CCCCEEEEEC--CSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCC
T ss_pred cccCCCCCCChHHhc----CCccc-CCCCceeccC--CceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccccccee
Confidence 568899987652211 11111 1245444433 3345889999999999999999999999988654321 11112
Q ss_pred eeCCCEEEcCCCCCCCE-EEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEE
Q psy14886 139 FENGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 217 (505)
Q Consensus 139 ~~~~~l~i~~v~~~d~G-~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~ 217 (505)
...++|.|.++...|+| .|+|.|.|..|.....+.|.|..+|.+ . ......|+.+.|.|.+.+.|.| .+.|+
T Consensus 209 ~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i-~----~~~~~~g~~v~l~C~~~g~P~p--~i~W~ 281 (347)
T 2ifg_A 209 LPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV-Q----LHTAVEMHHWCIPFSVDGQPAP--SLRWL 281 (347)
T ss_dssp SSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE-E----ECCCEESSSEEEEEEEEEESCC--EEEEE
T ss_pred cccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee-e----eccCccCceEEEEEEeeecCCC--cEEEE
Confidence 23456999999999999 999999999988877788888666664 1 1224578999999999999776 56799
Q ss_pred eCCEEecCCCCCcccCC----eeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 218 HNGVRIGNMDLNELETP----NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 218 ~~~~~~~~~~~~~~~~~----~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
++|..+........... ......+.|.|..+..+|.|.|+|.|.|..|..+..+.+.|..+|
T Consensus 282 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 282 FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp ETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred eCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 99998875322110000 001124569999999999999999999999999999998887665
No 232
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.79 E-value=1.4e-19 Score=155.13 Aligned_cols=165 Identities=18% Similarity=0.281 Sum_probs=112.9
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EECc---CC--CCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELLN---SE--TLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l~---~~--~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.|.|+|++ ..+. .. ........|+... + .+|.|.+++ .+|+|.|+|.+.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 91 (213)
T 3d9a_L 13 VTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVE-TEDFGMYFCQQS 91 (213)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC-GGGCEEEEEEEC
T ss_pred EeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCC-hhhCEEEEEeee
Confidence 468999999999998888889999853 2110 00 0000123566553 2 389999999 999999999999
Q ss_pred cccCceEe-eEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEecCCCcEEE------
Q psy14886 70 NQLKTRYS-SAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSGGRRKI------ 138 (505)
Q Consensus 70 ~~~~~~~~-~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~~~~~~~~------ 138 (505)
+..+.... .+.|.|.. .+|.+...+.. ..+.+|+.++|.|.+.+ .|.+ .+.|+++|..+........
T Consensus 92 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~--~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~ 169 (213)
T 3d9a_L 92 NSWPYTFGGGTKLEIKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSK 169 (213)
T ss_dssp SSSSCEECCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTT
T ss_pred cCCcceeCCCEEEEEecCCCCceeEeECCC--hhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCC
Confidence 87765433 34666653 13444332211 12347899999999987 5555 8999999998865411111
Q ss_pred ----eeCCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 139 ----FENGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 139 ----~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
.....|.|.++..+|.|.|+|.|.|.....
T Consensus 170 ~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 170 DSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp TCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 011269999999999999999999976554
No 233
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.79 E-value=5.9e-19 Score=149.70 Aligned_cols=169 Identities=14% Similarity=0.182 Sum_probs=113.6
Q ss_pred CCCCCceEEEEEEe----ccCCCeEEEEECCEECcCCCC-----CCCCCCcEEE---ECCeEEEEcCCCCCCCeEEEEEE
Q psy14886 1 MDNQADLTWTCEAF----GVPDVTYSWFRNGELLNSETL-----PLEDQDRYFI---QDNVLTIRYLNPERDPAMYQCRA 68 (505)
Q Consensus 1 v~~G~~~~l~C~~~----~~p~~~~~W~~~~~~l~~~~~-----~~~~~~~~~~---~~~~L~i~~~~~~~d~G~Y~C~~ 68 (505)
+.+|++++|.|.+. +.|.+.+.|++++..+..... .....+|... .+.+|.|.+++ .+|+|.|+|.+
T Consensus 6 v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~ 84 (201)
T 1dr9_A 6 KEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALR-PSDEGTYECVV 84 (201)
T ss_dssp EETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCC-GGGCEEEEEEE
T ss_pred EEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEeccc-chhCeEEEEEE
Confidence 35899999999995 346689999999987631000 0001123332 24689999999 99999999999
Q ss_pred EcccCceE-----eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecC-CCCCCeEEEEECCEEecCCCcEEEe-eC
Q psy14886 69 KNQLKTRY-----SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIF-EN 141 (505)
Q Consensus 69 ~~~~~~~~-----~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~~~-~~ 141 (505)
.+..+... ..+.|.|...++ .+.........|+.+.|.|.+. +.|.|.|.|+++|..+......... .+
T Consensus 85 ~~~~g~~~~~~~~~~~~l~V~~~~~----~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~ 160 (201)
T 1dr9_A 85 LKYEKDAFKREHLAEVTLSVKADFP----TPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPE 160 (201)
T ss_dssp EECCTTSCEEEEEEEEEEEEECCCC----CCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTT
T ss_pred EcCCCCccccccccEEEEEEcCCCC----CCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCC
Confidence 99765432 356666664221 1101111235688999999994 8899999999999988754332222 22
Q ss_pred -CCEE---EcCCCCCCCEEEEEEEEcCCCceeeeEEE
Q psy14886 142 -GNLL---ISPVSRDDSGIYSCTATNVHGMDESKGRL 174 (505)
Q Consensus 142 -~~l~---i~~v~~~d~G~y~C~~~~~~g~~~~~~~l 174 (505)
+.+. +..+...|.|.|+|.|.|..+.....+.+
T Consensus 161 ~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 161 TELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp TCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 2222 23455689999999999999887765543
No 234
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.79 E-value=1.4e-17 Score=151.49 Aligned_cols=232 Identities=10% Similarity=0.047 Sum_probs=147.6
Q ss_pred eEEEecCCCCCCEEEEEEEE---ecCCcEEEEEEEEE----cCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEE
Q psy14886 242 LLEITNASFADAGEYECVVK---STVGKISTKTTVIV----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI 314 (505)
Q Consensus 242 ~l~i~~~~~~~~g~y~C~~~---n~~g~~~~~~~l~v----~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v 314 (505)
...+..+.+.....+...|. +..|..+..+...+ ..+|.+|.++.+.......+.++|+++.+.+ .+..|.|
T Consensus 54 ~~~~~~~~~~~~y~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~~-~~~~Y~l 132 (314)
T 3bpo_C 54 TRRSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNTS-PDTNYTL 132 (314)
T ss_dssp SEEEEECCCSSCEEEEEEECC---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC----CCCCEEE
T ss_pred cEEEEEEcCCCcEEEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCCC-CCccEEE
Confidence 34455556666666666663 33333332232222 3467788889998888999999999987553 4788999
Q ss_pred EEEeCCCCCeEEeeeccccceeeeecCceeeEEeeecc----CCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCC
Q psy14886 315 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV----PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390 (505)
Q Consensus 315 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~----~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P 390 (505)
.|+..+...|..+..... ........+.. +. ..+.|.|+|.|.|..|.+..+.. .+.+.....+.||
T Consensus 133 ~y~~~~~~~~~~C~~~~~------~~~~~~c~~~~-~~~~~~~~~~y~~~V~a~n~~G~~~~~~~--~~~~~~~v~P~pP 203 (314)
T 3bpo_C 133 YYWHRSLEKIHQCENIFR------EGQYFGCSFDL-TKVKDSSFEQHSVQIMVKDNAGKIKPSFN--IVPLTSRVKPDPP 203 (314)
T ss_dssp EEEESSCSSCEECCCEEE------ETTEEEEEEEC-CC--------CCEEEEEEETTSCSCCEEE--EECSSSSEECCCC
T ss_pred EEEeCCCCccccCcCeec------CCCeEEEEECC-CCccccceeEEEEEEEEEcCCCceecccE--EEehhheEeeCCC
Confidence 998765555555432110 00112233332 44 37899999999999998864432 4555555667899
Q ss_pred ceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEee--------e-cCceeeEEEEcCCccceeeE
Q psy14886 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK--------E-YGNVGIAVVRIPSEFYYTEY 461 (505)
Q Consensus 391 ~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~l~~L~p~~~Y 461 (505)
.++++. ...+++.|+|++|. ..++.++.|.|+|+..+...|....+. . ......+.+.|.+|.|++.|
T Consensus 204 ~~l~~~-~~~~~l~lsW~~P~--~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y 280 (314)
T 3bpo_C 204 HIKNLS-FHNDDLYVQWENPQ--NFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLN 280 (314)
T ss_dssp EEEEEE-EETTEEEEEEECCT--TCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCE
T ss_pred CEEEEE-EcCCcEEEEEeCCC--ccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEE
Confidence 999987 66789999999953 334457899999999887788754331 0 01124578899999999999
Q ss_pred EEEEEEecC------CC-CCCCCceEEEeecc
Q psy14886 462 EVKVQAIND------VG-PGPESEVVTIWHDP 486 (505)
Q Consensus 462 ~~~v~a~n~------~G-~g~~s~~~~~~t~p 486 (505)
.|+|+|.+. .| .|++|+.+.+.+.+
T Consensus 281 ~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 281 TVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp EEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred EEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 999999985 55 37778777765543
No 235
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.79 E-value=1.9e-18 Score=142.54 Aligned_cols=156 Identities=15% Similarity=0.197 Sum_probs=110.4
Q ss_pred CCCCceEEEEEEe--ccCCCeEEEEE--CCEECcCCCC---CCCCCCcEEE-ECCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 2 DNQADLTWTCEAF--GVPDVTYSWFR--NGELLNSETL---PLEDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 2 ~~G~~~~l~C~~~--~~p~~~~~W~~--~~~~l~~~~~---~~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
.+|++++|.|... +.+.+.|.|+| ++..|..... .....+|+.+ .+++|.|.+++ .+|+|.|+|.+.|..|
T Consensus 12 ~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~-~~DsG~Y~c~~~n~~g 90 (182)
T 1hnf_A 12 ALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLK-TDDQDIYKVSIYDTKG 90 (182)
T ss_dssp ETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCC-GGGCEEEEEEEEETTS
T ss_pred ecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCC-hhhCEEEEEEEEeCCC
Confidence 4799999999542 24568999999 8877621000 0012456655 56799999999 9999999999999887
Q ss_pred ceEe--eEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCC
Q psy14886 74 TRYS--SAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR 151 (505)
Q Consensus 74 ~~~~--~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~ 151 (505)
.... .+.|.|....+ .+.+.. .+..++|.|.+.+.|.+.+.|+++|..+ .. ....|.+.. ..
T Consensus 91 ~~~~~~~~~L~V~~~~~-------~P~i~~-~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~------~~~~i~~~~-~~ 154 (182)
T 1hnf_A 91 KNVLEKIFDLKIQERVS-------KPKISW-TCINTTLTCEVMNGTDPELNLYQDGKHL-KL------SQRVITHKW-TT 154 (182)
T ss_dssp CEEEEEEEEEEEECCCC-------CCEEEE-ETTTTEEEEECSSCSSCEEEEEESSCEE-EE------ESSCEEEEC-CS
T ss_pred ceeEEEEEEEEEcCcCC-------CCEEEE-ccCcEEEEeEccCCCCCEEEEEECCEEC-CC------CCcEEEEec-cc
Confidence 7543 45677764211 122222 3447899999999888999999999877 11 233454433 47
Q ss_pred CCCEEEEEEEEcCCCceeeeEEE
Q psy14886 152 DDSGIYSCTATNVHGMDESKGRL 174 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~~~~~~~l 174 (505)
.|.|.|+|.|.|..+.......+
T Consensus 155 ~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 155 SLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEE
T ss_pred CCCcEEEEEEEeCCCCcEEccee
Confidence 89999999999999987776554
No 236
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.79 E-value=8.8e-19 Score=154.64 Aligned_cols=164 Identities=20% Similarity=0.212 Sum_probs=111.8
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEEC--CEECcC----C-----CCCCCCCCcEEEEC------CeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRN--GELLNS----E-----TLPLEDQDRYFIQD------NVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~--~~~l~~----~-----~~~~~~~~~~~~~~------~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.|.+.+.| .+.|.|+|+ +..+.. . .......+|+.+.. .+|.|.+++ .+|+
T Consensus 12 v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~Ds 90 (257)
T 1f3r_B 12 VRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ-TDDT 90 (257)
T ss_dssp ECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC-TTCC
T ss_pred ccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC-cccC
Confidence 46899999999999875 689999995 221110 0 00001235676532 389999999 9999
Q ss_pred eEEEEEEEcccC-------ce--EeeEEEEEEecC------------CCccCCCCCceEEeeCCCeEEEEeecCCCCCCe
Q psy14886 62 AMYQCRAKNQLK-------TR--YSSAQLRVLTLK------------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPK 120 (505)
Q Consensus 62 G~Y~C~~~~~~~-------~~--~~~~~l~v~~~~------------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~ 120 (505)
|.|+|.+.+..| .. ...+.|.|...+ ....+...+....+.+|++++|.|.+.+.+.+.
T Consensus 91 G~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 170 (257)
T 1f3r_B 91 GTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNY 170 (257)
T ss_dssp EEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBTC
T ss_pred EEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCCc
Confidence 999999998753 11 124567776422 011111112445688999999999999988889
Q ss_pred EEEEE--CCEEec------------CCCcEEEee---CCCEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 121 FVWKK--DGNIIG------------SGGRRKIFE---NGNLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 121 i~W~~--~g~~~~------------~~~~~~~~~---~~~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
+.|++ +|..+. ...++.... ..+|.|.++..+|+|.|+|.|.|..
T Consensus 171 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 171 LAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred EEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 99999 554321 123443322 2269999999999999999999864
No 237
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.79 E-value=5.4e-18 Score=151.98 Aligned_cols=257 Identities=16% Similarity=0.164 Sum_probs=151.0
Q ss_pred EEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEE
Q psy14886 192 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 271 (505)
Q Consensus 192 ~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~ 271 (505)
+..|.+++|.|.+.... .+.|.+++..... ..+++|.|..+...|+|.|+|.+ .|......
T Consensus 18 ~~~G~~v~l~C~~~~~~----~i~W~~~~~~~~~------------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~ 78 (306)
T 3d85_D 18 DAPGEMVVLTCDTPEED----GITWTLDQSSEVL------------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHS 78 (306)
T ss_dssp SCCCEEEEEECSSSCCS----SCEEEETTCCCCC------------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEE
T ss_pred CccCCcEEEECCCCCCC----cCEEEECCccccC------------CCCCEEEEEecCcCCCceEEEee---CCcccceE
Confidence 34789999999887322 4569998764321 14678999999989999999999 35555454
Q ss_pred EEEEc-------------CCCCCCC--ceEEEEEeCC-eEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccce
Q psy14886 272 TVIVE-------------GPPGLPG--GVQVVEVHKT-SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 335 (505)
Q Consensus 272 ~l~v~-------------~~p~~p~--~~~~~~~~~~-~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~ 335 (505)
.+.|. .++.||. .+.+...... .++++|.+..+.+. ...|...+ ......|..+........
T Consensus 79 ~l~v~~~~~~~~~t~i~~~~~~pp~~~~lsC~~~~~~~~~~C~W~pg~~~~l-~~~~~~~r-~~~~~~~~~C~~~~~~~~ 156 (306)
T 3d85_D 79 LLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDL-TFSVKSSR-GSSDPQGVTCGAATLSAE 156 (306)
T ss_dssp EEEEEEEETTEECCCSSCCCC---CCCCCEEEBSSSSSEEEEEEEESCCSSE-EEEEEEEE-CSSSCEEEEECCCEEEEE
T ss_pred EEEEEeccCCcceeeeecccCCCCCCCcceEEcCCcccCcEEEecCCCCCce-eEEEEEEe-cCCCCcceECCCCCCCcc
Confidence 44443 2233332 4555443433 89999998765322 22343332 111223444322111001
Q ss_pred eeeecCce--eeEE--eeeccCC----ceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeecc-ccccEEEE
Q psy14886 336 VDRYTGRK--EASI--ENVLVPW----STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG-KIGDLSIS 406 (505)
Q Consensus 336 ~~~~~~~~--~~~~--~~~L~~~----~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~-~~~~v~l~ 406 (505)
...+.+.. .... ...+.++ ..|.|+|.|.|+.|....+. .+.......|.||.++.+... ....+.|+
T Consensus 157 ~c~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~---~f~~~~iVkPdPP~~l~~~~~~~~~~l~vs 233 (306)
T 3d85_D 157 RVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTS---SFFIRDIIKPDPPKNLQLKPLKNSRQVEVS 233 (306)
T ss_dssp EEC--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEE---EECHHHHBCCCCCEEEEEEEC----CEEEE
T ss_pred ceeecCccccceeeeeeccccccccccEEEEEEEEEEccCCccccce---EEEehhcEecCCCceEEEEEecCCCcEEEE
Confidence 11111111 1110 1114444 48999999999999754331 333334455668999999863 44899999
Q ss_pred EEeCCccccCCC----CceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEE
Q psy14886 407 WEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482 (505)
Q Consensus 407 W~~~~~~~~~~~----i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~ 482 (505)
|++|+ ..+.+ .+.|.|+|+..+...|....... .+.+.|. +++.|.|+|+|.|..|.|.+|++...
T Consensus 234 W~~P~--~~~~p~~~~~L~Y~vryr~~~~~~~~~~~~~~-----~ts~~l~---~~~~Y~vqVRa~~~~~~G~WSeWS~~ 303 (306)
T 3d85_D 234 WEYPD--TWSTPHSYFSLTFCVQVQGKSKREKKDRVFTD-----KTSATVI---CRKNASISVRAQDRYYSSSWSEWASV 303 (306)
T ss_dssp EECCT--TSCSCTTTSCEEEEEEEECC------CEEEES-----SSEEEEC---CCSSCEEEEEEEESSSCCCCCCCEEE
T ss_pred EcCCC--CCcCCCceeeEEEEEEEEECCCCccEEEeecc-----ccEEEEe---CCCeEEEEEEeccCCCCCCCCCCCCC
Confidence 99943 33333 37999999988865565442221 1345554 49999999999999999999998764
No 238
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=4.6e-18 Score=141.97 Aligned_cols=168 Identities=17% Similarity=0.228 Sum_probs=120.3
Q ss_pred EEeeCCCeEEEEeecCCCCCC--eEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 99 TYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p~~--~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
..+.+|+++.|.|.+.+.|.+ .+.|+++|..+....... ....|.|. ..+|+|.|+|.+.| .....+.|.|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~--~~~~l~i~--~~~d~G~Y~C~~~n---~~~~~~~l~V 80 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG--QKTEFKVD--SDDQWGEYSCVFLP---EPMGTANIQL 80 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC--SEEEEEEC--GGGCCEEEEEEEES---TTSCEEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC--CcEEEEEe--chhhCeEEEEEEEC---CcCcEEEEEE
Confidence 457899999999998887666 999999999886543211 11235555 58899999999998 2335677888
Q ss_pred EeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEe---CCEEecCCCCCcccCCeeee--cCCeEEEecCC-C
Q psy14886 177 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH---NGVRIGNMDLNELETPNINI--DGGLLEITNAS-F 250 (505)
Q Consensus 177 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~---~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~-~ 250 (505)
..+|.+... +....+..|+.+.|.|.+.+.|. ...+.|++ ++........ ........ ....|.|..+. .
T Consensus 81 ~~~P~~~~~-~~~~~~~~g~~~~l~C~~~g~p~-~~~i~W~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~ 156 (184)
T 3b5h_A 81 HGPPRVKAV-KSSEHINEGETAMLVCKSESVPP-VTDWAWYKITDSEDKALMNGS--ESRFFVSSSQGRSELHIENLNME 156 (184)
T ss_dssp CCSCCCEES-CSEEEECTTSCEEEEEECCCSSC-CCEEEEEECCSSSCEECCTTG--GGTEEEEEETTEEEEEECSCCTT
T ss_pred ecCCceeec-CCCcEEcCCCcEEEEEEECCCCC-CCeEEEEEcCCCCCEEeecCC--CCEEEEEecCCeeEEEEeecccc
Confidence 777765543 45567889999999999998872 23667999 4444322110 01111111 12489999999 8
Q ss_pred CCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 251 ADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 251 ~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
+|.|.|+|.|.|..|.....+.|.|..
T Consensus 157 ~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 157 ADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp TSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ccCceEEEEEEeCCCcceEEEEEEEec
Confidence 999999999999999998888888763
No 239
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.78 E-value=3.2e-19 Score=152.42 Aligned_cols=164 Identities=18% Similarity=0.306 Sum_probs=111.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EECc---C--CCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELLN---S--ETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l~---~--~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.|.|+|++ ..+. . .........|+... ..+|.|.+++ .+|+|.|+|.+.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 90 (210)
T 1lk3_L 12 VSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVE-ADDTAIYFCQQS 90 (210)
T ss_dssp ECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCEEEEEEEC
T ss_pred EcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCC-HHHCeEEEEEEE
Confidence 468999999999998888889999942 2220 0 00000123566543 2389999999 999999999999
Q ss_pred cccCceEe-eEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecCCCcEE--E--ee
Q psy14886 70 NQLKTRYS-SAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGSGGRRK--I--FE 140 (505)
Q Consensus 70 ~~~~~~~~-~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~~~~~~--~--~~ 140 (505)
+..+.... ...|.|.. .+|.+...+.. ..+.+|+.++|.|.+.|. |.+ .+.|+++|..+....... . ..
T Consensus 91 ~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~ 168 (210)
T 1lk3_L 91 WNGPLTFGAGTKLELKRADAAPTVSIFPPS--TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSK 168 (210)
T ss_dssp SSSSCEECCCEEEEECCCCBCCEEEEECCC--HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTT
T ss_pred cCCCceeCCCEEEEEcCCCcCCeEEEECCc--hhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCC
Confidence 87665433 34666653 23444332211 123479999999999874 543 899999999876541111 1 11
Q ss_pred CC------CEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 141 NG------NLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 141 ~~------~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
++ .|.|.++..+|+|.|+|.|.|....
T Consensus 169 ~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 169 DSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 22 5899999999999999999987654
No 240
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.78 E-value=5.8e-19 Score=148.98 Aligned_cols=159 Identities=13% Similarity=0.244 Sum_probs=113.6
Q ss_pred EeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEE--eeCCCEEEcCCCCCCCEEEEEEEEcCCCc--eeeeEEEE
Q psy14886 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--FENGNLLISPVSRDDSGIYSCTATNVHGM--DESKGRLI 175 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~--~~~~~l~i~~v~~~d~G~y~C~~~~~~g~--~~~~~~l~ 175 (505)
.+.+|++++|.|.+.+ +.+.+.|+|+|..+........ ...+.|.|.+++.+|+|.|+|.+.|..|. ....+.|.
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~ 93 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELV 93 (196)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEE
T ss_pred cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEE
Confidence 6889999999999988 6779999999987643211111 12346999999999999999999998873 34457777
Q ss_pred EEeC--CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCC
Q psy14886 176 VLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 253 (505)
Q Consensus 176 v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~ 253 (505)
|... ++.+...+ ...+..|+.++|.|.+.+.+ ..+.|++++..+....... ..........|.|.++..+|.
T Consensus 94 V~~~~~~p~~~~~~-~~~v~~G~~v~L~C~~~~~~---~~~~w~k~g~~~~~~~~~~--~~~~~~~~~~L~i~~v~~~d~ 167 (196)
T 3p2t_A 94 MTGAYSKPTLSALP-SPLVTSGKSVTLLCQSRSPM---DTFLLCKERAAHPLLCLRS--EHGAQQHQAEFPMSPVTSVHG 167 (196)
T ss_dssp EECSSCCCEEEEES-CSEECTTCCEEEEEEEEEEE---EEEEEEETTCCCGGGSEEE--EEEEEEEEEEEEECSCCGGGC
T ss_pred ecCCCCCCEEEeCC-cceecCCCeEEEEEecCCCC---CEEEEEeCCCcccceeecc--cccccCcceEEEeCCCcccCC
Confidence 7642 22222222 23678899999999998743 3678999987654321000 001122456799999999999
Q ss_pred EEEEEEEEecCC
Q psy14886 254 GEYECVVKSTVG 265 (505)
Q Consensus 254 g~y~C~~~n~~g 265 (505)
|.|+|.|.|..+
T Consensus 168 G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 168 GTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEEECGGG
T ss_pred CeEEEEEEcCCC
Confidence 999999999876
No 241
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=1.1e-18 Score=151.54 Aligned_cols=168 Identities=19% Similarity=0.275 Sum_probs=115.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCc--eEee
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT--RYSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~--~~~~ 78 (505)
|.+|++++|.|.+.+ +...+.|+|++..+..... .......+..|.|.+++ .+|+|.|+|.+.+..+. ....
T Consensus 18 v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~----~~~~~~~~~~L~I~~v~-~~DsG~Y~C~~~~~~~~s~~S~~ 91 (242)
T 1p6f_A 18 VPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP----KPPERINKVKFYIPDMN-SRMAGQYSCIYRVGELWSEPSNL 91 (242)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC----SSCTTCCEEEEEECSCC-GGGCEEEEEEEEETTEECCCCCC
T ss_pred cCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc----cccCCcceeEEEecCCC-cccCeEEEEEEecCCccccCCcc
Confidence 468999999999865 4578999999987642100 00001134679999999 99999999999875432 2334
Q ss_pred EEEEEEec--CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEE
Q psy14886 79 AQLRVLTL--KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGI 156 (505)
Q Consensus 79 ~~l~v~~~--~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 156 (505)
+.|.|... +|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+... ......++.|.|.+++.+|+|.
T Consensus 92 ~~L~V~~~~~~P~i~~~p---~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~-~~~~~~~~~l~I~~v~~~d~G~ 166 (242)
T 1p6f_A 92 LDLVVTEMYDTPTLSVHP---GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ-RGYGKVQAEFPLGPVTTAHRGT 166 (242)
T ss_dssp EEEEEECCSCCCEEEEES---CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE-EEECSSEEEEEEEECCGGGCEE
T ss_pred eEEEeecccCCCceEccC---CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc-ccCCCceEEEEeCCCccccCEE
Confidence 66777642 34343322 2358899999999998765 4599999998755421 1111223469999999999999
Q ss_pred EEEEEEcCC---CceeeeEEEEEEeC
Q psy14886 157 YSCTATNVH---GMDESKGRLIVLHG 179 (505)
Q Consensus 157 y~C~~~~~~---g~~~~~~~l~v~~~ 179 (505)
|+|.+.+.. ...+..+.|.|...
T Consensus 167 Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 167 YRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp EEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred EEEEEECCCCcccCCCCCEEEEEecc
Confidence 999999864 23334477777653
No 242
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.78 E-value=1.1e-18 Score=147.56 Aligned_cols=160 Identities=14% Similarity=0.229 Sum_probs=109.7
Q ss_pred EeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC--CcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCC-C--ceeeeEEE
Q psy14886 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVH-G--MDESKGRL 174 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~--~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~-g--~~~~~~~l 174 (505)
.+.+|++++|.|.+.+.|. .+.|+|+|..+... ........+.|.|.++..+|+|.|+|.+.|.. | .....+.|
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l 93 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLEL 93 (198)
T ss_dssp EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEE
T ss_pred cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEE
Confidence 6889999999999988875 79999999866321 11111234679999999999999999999977 4 33455778
Q ss_pred EEEeCC--eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCC
Q psy14886 175 IVLHGP--SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 252 (505)
Q Consensus 175 ~v~~~p--~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 252 (505)
.|...+ +.+.. .....+..|+.+.|.|.+.+. .+ .+.|++++..+........ ..........|.|.++..+|
T Consensus 94 ~V~~~~~~p~i~~-~~~~~v~~G~~v~L~C~~~~~-~~--~v~W~k~g~~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~D 168 (198)
T 1ugn_A 94 VVTGAYIKPTLSA-QPSPVVNSGGNVTLQCDSQVA-FD--GFILCKEGEDEHPQCLNSQ-PHARGSSRAIFSVGPVSPSR 168 (198)
T ss_dssp EEECSSCCCEEEE-ESCSEEETTCCEEEEEECSSC-CS--EEEEEEC------CEEEC-------CCEEEEEECCCCTTS
T ss_pred EEcccccCCcccc-CCccccCCCCcEEEEEecCCC-Cc--EEEEEECCCccCCcccccc-ccCCCcceeEEEecccCccc
Confidence 887622 22222 223578899999999999887 33 6779999887643210000 00000123689999999999
Q ss_pred CEEEEEEEEecCC
Q psy14886 253 AGEYECVVKSTVG 265 (505)
Q Consensus 253 ~g~y~C~~~n~~g 265 (505)
.|.|+|.|.|..+
T Consensus 169 ~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 169 RWWYRCYAYDSNS 181 (198)
T ss_dssp CEEEEEEEECTTS
T ss_pred CeEEEEEEEeCCC
Confidence 9999999999876
No 243
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.78 E-value=2.7e-17 Score=137.98 Aligned_cols=161 Identities=16% Similarity=0.220 Sum_probs=114.0
Q ss_pred ceEEeeCCCeEEEEeecCC-CCCCeEEEEECCEEec---CC---------------CcEEEeeCCCEEEcCCCCCCCEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEA-APKPKFVWKKDGNIIG---SG---------------GRRKIFENGNLLISPVSRDDSGIY 157 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~-~p~~~i~W~~~g~~~~---~~---------------~~~~~~~~~~l~i~~v~~~d~G~y 157 (505)
..+.+.+|++++|.|.+.+ .+.+.|.|++++..+. .. .+..+..+++|.|.+++.+|+|.|
T Consensus 6 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y 85 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSY 85 (193)
T ss_dssp EEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEE
T ss_pred eEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceE
Confidence 4567899999999999875 3456999999886542 10 244444567899999999999999
Q ss_pred EEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeec-cEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCee
Q psy14886 158 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR-NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 236 (505)
Q Consensus 158 ~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~-~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 236 (505)
+|.+.+..+.....+.|.|..++..............|. .+.|.|.+.+.+ +...+.|++++..+..
T Consensus 86 ~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~-p~p~i~W~~~g~~l~~----------- 153 (193)
T 2if7_A 86 RAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDAD-DNVSFRWEALGNTLSS----------- 153 (193)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCC-TTCEEEEEETTEEEES-----------
T ss_pred EEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCC-CceEEEEEeCCEEcCC-----------
Confidence 999999888777778888876543222111111223454 799999999853 2347789999876532
Q ss_pred eecCCeEEEecCCCC-CCEEEEEEEEecCCcEEEEEE
Q psy14886 237 NIDGGLLEITNASFA-DAGEYECVVKSTVGKISTKTT 272 (505)
Q Consensus 237 ~~~~~~l~i~~~~~~-~~g~y~C~~~n~~g~~~~~~~ 272 (505)
+..|.|.....+ |.|.|+|.|.|..|..+..+.
T Consensus 154 ---~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 154 ---QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp ---SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred ---CCeEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 234666544444 899999999999998765543
No 244
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.78 E-value=1.9e-18 Score=163.47 Aligned_cols=227 Identities=11% Similarity=0.025 Sum_probs=86.6
Q ss_pred cCCeEEEecCCCCCCEEEEEEEEec--CCcEEEE--EEEEEc-C-CCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceE
Q psy14886 239 DGGLLEITNASFADAGEYECVVKST--VGKISTK--TTVIVE-G-PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 312 (505)
Q Consensus 239 ~~~~l~i~~~~~~~~g~y~C~~~n~--~g~~~~~--~~l~v~-~-~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y 312 (505)
....+.|..+.....+.+...|.|. .|....+ ..+... . ++.+|.++.+.... .++.|+|+++. ...+|
T Consensus 161 ~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~pp~----~~~~Y 235 (414)
T 3se4_A 161 IYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDYTY----ANMTF 235 (414)
T ss_dssp ECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEECSS----SSCEE
T ss_pred CCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEec-CCeEEEECCCC----CCeEE
Confidence 3467888888887777777777774 3433322 233332 2 34567777776654 67999999864 23599
Q ss_pred EEEEEeC--------CCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCC
Q psy14886 313 KIIARTN--------WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 384 (505)
Q Consensus 313 ~v~~~~~--------~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~ 384 (505)
.|+|+.. +...|........ .......+..+|.++..|.|||+|.|..|.|+++... .+.+.+.
T Consensus 236 ~v~y~~~~~~~~~~~~~~~w~~~~~~~~-------~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~-~~~t~~~ 307 (414)
T 3se4_A 236 QVQWLHAFLKRNPGNHLYKWKQIPDCEN-------VKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEI-KFDTEIQ 307 (414)
T ss_dssp EEEEEESGGGSCCCC--CCCCBCSTTTT-------BSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCE-EEETTCC
T ss_pred EEEEEehhccccccccccCceECCCccC-------CCCCEEcCCcccccCccEEEEEEEecCCCcccccccc-cccchhc
Confidence 9999864 2355654311000 0122333433599999999999999999999888664 7788888
Q ss_pred CCCCCCceeeeeccccccEEEEEEeCCccc----cCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceee
Q psy14886 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREK----QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460 (505)
Q Consensus 385 ~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 460 (505)
.+++||. +.+.. ..+++.|.|++|.... .++.+++|.|.|++.+...... .. .....+.|.+|.|++.
T Consensus 308 ~~~~pP~-l~~~~-~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~~~--~~----~~~~~~~l~~L~p~t~ 379 (414)
T 3se4_A 308 AFLLPPV-FNIRS-LSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERK--II----EKKTDVTVPNLKPLTV 379 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCe-EEEEE-CCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCCCceEE--EE----ecCCeEEeCCCCCCCe
Confidence 8889998 77764 4689999999853322 1246889999998776332111 11 1346788999999999
Q ss_pred EEEEEEEecC----CCCCCCCceEEEeecc
Q psy14886 461 YEVKVQAIND----VGPGPESEVVTIWHDP 486 (505)
Q Consensus 461 Y~~~v~a~n~----~G~g~~s~~~~~~t~p 486 (505)
|.|+|+|++. .|.|++|+.+.+.|.+
T Consensus 380 Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~ 409 (414)
T 3se4_A 380 YCVKARAHTMDEKLNKSSVFSDAVCEKTKP 409 (414)
T ss_dssp ------------------------------
T ss_pred EEEEEEEEecccccCCCCCCCCCEeEEeCC
Confidence 9999999993 6999999999888865
No 245
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.78 E-value=3.4e-18 Score=150.91 Aligned_cols=176 Identities=18% Similarity=0.281 Sum_probs=116.6
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECcC----------CCCCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLNS----------ETLPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~~----------~~~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
|.+|++++|.|.+.+.+ .+.+.|+|.. ..+.. ........+|+.+. ..+|.|.+++ .+|
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~D 92 (256)
T 3umt_A 14 VKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT-SED 92 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC-GGG
T ss_pred EcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC-ccc
Confidence 46899999999998865 6899999832 11100 00000123566553 1249999999 999
Q ss_pred CeEEEEEEEcc----cCceEeeEEEEEEec---------------CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeE
Q psy14886 61 PAMYQCRAKNQ----LKTRYSSAQLRVLTL---------------KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKF 121 (505)
Q Consensus 61 ~G~Y~C~~~~~----~~~~~~~~~l~v~~~---------------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i 121 (505)
+|.|.|.+.+. .+.....+.|.|... ++.+...+ ....+.+|++++|.|.+.+.+.+.+
T Consensus 93 sG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~v~~G~~v~L~C~~~~~~~~~v 170 (256)
T 3umt_A 93 SAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP--SSLSASLGERVSITCRASQDIGSNL 170 (256)
T ss_dssp CEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC--SEEEECTTCCEEEEEEESSCCTTCE
T ss_pred CEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC--CeEEEECCCCEEEEEEEecCCCcEE
Confidence 99999999876 222233466777642 33333332 4567899999999999999888899
Q ss_pred EEEEC--CEEec------------CCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEcCCCceeee-EEEEEEeC
Q psy14886 122 VWKKD--GNIIG------------SGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHG 179 (505)
Q Consensus 122 ~W~~~--g~~~~------------~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~~ 179 (505)
.|+++ +..+. ...++.....+ +|.|.+++.+|+|.|+|.+.+........ ..|.|...
T Consensus 171 ~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 171 NWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp EEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred EEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 99983 22111 12344433322 49999999999999999999865444333 56776543
No 246
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.78 E-value=4e-18 Score=150.09 Aligned_cols=174 Identities=17% Similarity=0.225 Sum_probs=117.2
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEEC--CEECc---CCC-------CCCCCCCcEEEEC------CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRN--GELLN---SET-------LPLEDQDRYFIQD------NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~--~~~l~---~~~-------~~~~~~~~~~~~~------~~L~i~~~~~~~d 60 (505)
|.+|++++|.|.+.+.| .+.|.|+|+ +..+. ... ......+|+.+.. .+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 90 (256)
T 1nqb_A 12 VKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLT-SED 90 (256)
T ss_dssp ECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred ecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCC-hhh
Confidence 46899999999998865 689999994 22211 000 0001235666532 489999999 999
Q ss_pred CeEEEEEEEcccCc----e-EeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCC-----eEEEEE--CCE
Q psy14886 61 PAMYQCRAKNQLKT----R-YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-----KFVWKK--DGN 128 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~----~-~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-----~i~W~~--~g~ 128 (505)
+|.|+|.+.+..+. . ...+.|.|.. +|.+...+ ....+.+|++++|.|.+.+.|.+ .+.|++ +|.
T Consensus 91 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~-~~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~ 167 (256)
T 1nqb_A 91 SAVYYCARYDYYGSSYFDYWGQGTTVTVSS-DIELTQTP--LSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQ 167 (256)
T ss_dssp CEEEEEEECCTTSSSSCSEECCCEEEEECC-CCCEEEEC--SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTS
T ss_pred CEEEEEEEeeccCccceeEEcCceeeeecc-cccEEecC--cEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCC
Confidence 99999999987552 1 1235666663 34333322 45678999999999999988764 999999 554
Q ss_pred Eec------------CCCcEEEee---CCCEEEcCCCCCCCEEEEEEEEcCCCceee-eEEEEEEe
Q psy14886 129 IIG------------SGGRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVLH 178 (505)
Q Consensus 129 ~~~------------~~~~~~~~~---~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~-~~~l~v~~ 178 (505)
.+. ...++.... ..+|.|.+++.+|+|.|+|.+.+....... ...|.|..
T Consensus 168 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 168 SPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp CEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 331 123443322 235999999999999999999875433322 25566643
No 247
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.78 E-value=7.8e-18 Score=151.65 Aligned_cols=246 Identities=12% Similarity=0.119 Sum_probs=142.9
Q ss_pred CceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeC----CCEEEcCCCCCCCEEEEEEEEcCCCce---
Q psy14886 96 ESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMD--- 168 (505)
Q Consensus 96 ~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~----~~l~i~~v~~~d~G~y~C~~~~~~g~~--- 168 (505)
...+.+.+|+++.|.|.+.+. +.|++++..+. .+...... +.|.|.++..+|+|.|+|.|.|..|..
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 80 (289)
T 3mjg_X 7 GPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDE 80 (289)
T ss_dssp CSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CC
T ss_pred CCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCc
Confidence 456789999999999999875 99999998763 12222222 369999999999999999999988762
Q ss_pred eeeEEEEEEeCCeeeeeCCCc---eEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEE
Q psy14886 169 ESKGRLIVLHGPSYYEQLPPK---ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 245 (505)
Q Consensus 169 ~~~~~l~v~~~p~~~~~~~~~---~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 245 (505)
...+.+.|..+.......... ..+..|+.+.|.|.+. .|.+.+.|.|..++..+... .. ....+.
T Consensus 81 ~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~---------~~-~~~~~~- 148 (289)
T 3mjg_X 81 RKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVP---------YD-HQRGFS- 148 (289)
T ss_dssp CEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCC---------EE-TTTEEE-
T ss_pred EEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCcccee---------ec-CCcCee-
Confidence 233444443222221111112 5678899999999998 66667776665544433210 01 111111
Q ss_pred ecCCCCCCEEEEEEEEecCCcEE-EEEEEEEcCCCCCCCceE-----EEEEeCCeEEEEeecCCCCCCCCceEEEEEEeC
Q psy14886 246 TNASFADAGEYECVVKSTVGKIS-TKTTVIVEGPPGLPGGVQ-----VVEVHKTSATIQWTDGATNGRPITHYKIIARTN 319 (505)
Q Consensus 246 ~~~~~~~~g~y~C~~~n~~g~~~-~~~~l~v~~~p~~p~~~~-----~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~ 319 (505)
...|.|.|+|.|.|..+... ..+.+.+... .+|. +. .....+..+.|.|... +.|...+.|.+...
T Consensus 149 ---~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~-~~p~-i~~~~~~~~v~~G~~v~L~C~~~---g~p~p~v~W~~~~~ 220 (289)
T 3mjg_X 149 ---GIFEDRSYICKTTIGDREVDSDAYYVYRLQV-SSIN-VSVNAVQTVVRQGENITLMCIVI---GNEVVNFEWTYPRK 220 (289)
T ss_dssp ---ECCCSSEEEEEEEETTEEEECCCEEEEECCC-CCCC-CEEEESCSEEETTSCEEEEEEEE---SCSSBEEEEECTTS
T ss_pred ---eeccCcEEEEEEEeCCceeeeeeEEEEecCC-CCCC-cEEeCCcceeEcCCCEEEEEEEC---CCCCcceEEEcCCc
Confidence 24688999999998776543 3356666553 2221 11 1244677888998842 23334444432111
Q ss_pred CCCC-eEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCC
Q psy14886 320 WNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 371 (505)
Q Consensus 320 ~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~ 371 (505)
.... ......... .........+.+.. +...+.+.|+|.|.|..|...
T Consensus 221 ~~~~~~~~~~~~~~---~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~N~~G~~~ 269 (289)
T 3mjg_X 221 ESGRLVEPVTDFLL---DMPYHIRSILHIPS-AELEDSGTYTCNVTESVNDHQ 269 (289)
T ss_dssp SSSCCCCCEEEESC---TTTTEEEEEEEESS-CCSSCCEEEEEEEEETTTTEE
T ss_pred cCCCcccccccccC---CcceEEEEEEEEcc-cChhhCcEEEEEeecCCCCce
Confidence 1000 000000000 00000123444444 999999999999999999765
No 248
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.77 E-value=2.7e-17 Score=155.84 Aligned_cols=254 Identities=12% Similarity=0.125 Sum_probs=158.5
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEe-eCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~-~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
....+.+|++++|.|.+. .+.|.|+++|..+... + +. ..+.|+|.++...|.|.|.|...+ +.....+.+.
T Consensus 211 ~~~~v~~Gs~vtl~C~a~---~~~I~W~~ng~~i~~~-r--i~~~~~~L~I~nl~~sd~g~y~~~C~~--~~~i~~~~l~ 282 (488)
T 2q7n_A 211 QDKVVLAGSNMTICCMSP---TKVLSGQIGNTLRPLI-H--LYGQTVAIHILNIPVSENSGTNIIFIT--DDDVYGTVVF 282 (488)
T ss_dssp TTCEEESSCCCEEEECCS---SCEEEEEETTEECCCE-E--CSSSCEEEECCSCCCCCSSCEEEEEEE--SSCEEEEEEE
T ss_pred CCCEEcCCCCEEEEEECC---CCEEEEEECCEECchh-h--ccceEEEEEEeCCCcccCCcEEEEEEc--CCeEEEEEEE
Confidence 335588999999999998 3599999999887542 1 11 123589999999998888887663 2223356777
Q ss_pred EEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCC--------CeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEec
Q psy14886 176 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--------DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247 (505)
Q Consensus 176 v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--------~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 247 (505)
+..+|.. +..+.+.....-.+.|.+...... .+.+.+...+......... ........+.+..
T Consensus 283 v~~pP~~----P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~-----~~~~~~~~ct~~l 353 (488)
T 2q7n_A 283 AGYPPDV----PQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIE-----GLTNETYRLGVQM 353 (488)
T ss_dssp EECCCCC----CCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSS-----CCCSSCEEEEEEC
T ss_pred eeCCCCC----CcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCcccc-----ccCCceEEEEEcC
Confidence 7665543 334444443444566665443221 2222222222111100000 0001112344443
Q ss_pred CCCCCCEEEEEEEEecCCcEEEEEEEEE--cCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeE
Q psy14886 248 ASFADAGEYECVVKSTVGKISTKTTVIV--EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 325 (505)
Q Consensus 248 ~~~~~~g~y~C~~~n~~g~~~~~~~l~v--~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~ 325 (505)
......+.|++.|.|..|.......+.+ ..+|.+|.++.+.....+++.|+|++|...++.+..|+|+|+..+...|.
T Consensus 354 ~~~~t~Y~f~V~A~N~~G~~~S~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~ 433 (488)
T 2q7n_A 354 HPGQEIHNFTLTGRNPLGQAQSAVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEV 433 (488)
T ss_dssp CSSCCCCEEEEEEEETTEEEEEEEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEE
T ss_pred CCCccEEEEEEEEEeCCCCccceEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCce
Confidence 3334677899999999998544323322 24788999999888889999999999875566789999999988777774
Q ss_pred EeeeccccceeeeecCceee--EEeeeccCCceeEEEEEEEcCCCcCCCCCCC
Q psy14886 326 NVSEHVIGKEVDRYTGRKEA--SIENVLVPWSTYEFKVIAGNELGYGEPSSPS 376 (505)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~--~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~ 376 (505)
....... .....+ .+.+ |.|++.|.|+|+|.| .|.|.+|.++
T Consensus 434 ~~~~~~~-------~~~~~~~v~l~~-L~P~T~Y~~rVRA~~-~g~G~WS~WS 477 (488)
T 2q7n_A 434 RNATIRG-------AEDSTYHVAVDK-LNPYTAYTFRVRCSS-KTFWKWSRWS 477 (488)
T ss_dssp EEEEEEC-------CEEEEEEEEECS-CCSSCCBBCCEEEEE-SSCSSCCCCC
T ss_pred EEEEEec-------CCCcEEEEEeCC-CCCCceEEEEEEEEE-CCCCCCCCCc
Confidence 3211100 001122 4454 999999999999999 8887555554
No 249
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.77 E-value=4e-18 Score=150.06 Aligned_cols=176 Identities=18% Similarity=0.224 Sum_probs=122.1
Q ss_pred ceEEeeCCCeEEEEeecCC---CCCCeEEEEECCEEec------------------------------CCCcEEEee--C
Q psy14886 97 SETYAGEGGNVTIFCNPEA---APKPKFVWKKDGNIIG------------------------------SGGRRKIFE--N 141 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~---~p~~~i~W~~~g~~~~------------------------------~~~~~~~~~--~ 141 (505)
..+.+.+|+++.|.|.+.+ .+.+.+.|++++.... ...+..+.. +
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 89 (250)
T 2fbo_J 10 TEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAA 89 (250)
T ss_dssp SEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTS
T ss_pred CceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCc
Confidence 4577899999999999876 6788999999764320 112222222 2
Q ss_pred CCEEEcCCCCCCCEEEEEEEEcCCCce-----eeeEEEEEEeC--Ce-eeeeCCCceEEEeeccEEEEEEeeecCCCCeE
Q psy14886 142 GNLLISPVSRDDSGIYSCTATNVHGMD-----ESKGRLIVLHG--PS-YYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 213 (505)
Q Consensus 142 ~~l~i~~v~~~d~G~y~C~~~~~~g~~-----~~~~~l~v~~~--p~-~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 213 (505)
.+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|... |+ +....+....+..|+.+.|.|.+.+.|.| .
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p--~ 167 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA--N 167 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC--E
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC--e
Confidence 479999999999999999999987654 34677777654 22 22223334556679999999999998876 6
Q ss_pred EEEEeCCEEecCCCCC------------------cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCC---cEEEEEE
Q psy14886 214 YIWTHNGVRIGNMDLN------------------ELETPNINIDGGLLEITNASFADAGEYECVVKSTVG---KISTKTT 272 (505)
Q Consensus 214 ~~w~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g---~~~~~~~ 272 (505)
+.|++++..+...... .............|.|..+..+|.|.|+|.|.|..| .....+.
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~ 247 (250)
T 2fbo_J 168 VTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTI 247 (250)
T ss_dssp EEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEE
T ss_pred eEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEE
Confidence 7799988766432100 000111111347899999999999999999999555 4455555
Q ss_pred EE
Q psy14886 273 VI 274 (505)
Q Consensus 273 l~ 274 (505)
|.
T Consensus 248 l~ 249 (250)
T 2fbo_J 248 LK 249 (250)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 250
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.77 E-value=7.1e-18 Score=151.96 Aligned_cols=179 Identities=12% Similarity=0.098 Sum_probs=127.1
Q ss_pred CCCCCCCceEEEEE-----eCCeEEEEeecCC--CCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEee
Q psy14886 277 GPPGLPGGVQVVEV-----HKTSATIQWTDGA--TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 349 (505)
Q Consensus 277 ~~p~~p~~~~~~~~-----~~~~v~l~w~~~~--~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (505)
.+|..|.++..... +.+++.|+|+++. +.++++.+|.|+++......+ .... ....+..
T Consensus 2 ~~Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~-~~~~-------------~~~~~~~ 67 (290)
T 3l5i_A 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ-NYTV-------------NATKLTV 67 (290)
T ss_dssp CCCSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCE-EEEE-------------SSSEEEE
T ss_pred CCCCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCce-eEec-------------CCcEEEE
Confidence 45666666655332 2589999999844 567889999999998765432 1111 1223445
Q ss_pred eccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEc
Q psy14886 350 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 429 (505)
Q Consensus 350 ~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~ 429 (505)
|.+++.|.|+|.|.|..|.+.++.. .+......++.+|.++.+.... ++|.|.|+++. . .+.+|.|+|+..
T Consensus 68 -l~p~t~Y~~~V~A~n~~G~s~~s~~--~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~--~---~i~~Y~v~~~~~ 138 (290)
T 3l5i_A 68 -NLTNDRYLATLTVRNLVGKSDAAVL--TIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPR--E---SVKKYILEWCVL 138 (290)
T ss_dssp -EECSSCEEEEEEEEESSCBCCCEEE--EECCTTCCCCCCCEEEEEEEET-TEEEEEEECCS--S---CCCEEEEEEEEE
T ss_pred -EcCCceEEEEEEEEcCCCCCCCceE--EeecccccCCCccceeEEEeCC-CeEEEEEeCCC--C---CCCcEEEEEEEC
Confidence 9999999999999999999876632 2222223566778888877554 69999999842 2 799999999987
Q ss_pred CCC-----CcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEee
Q psy14886 430 NDT-----EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWH 484 (505)
Q Consensus 430 ~~~-----~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t 484 (505)
+.. .|.... ......+.+.+|.|++.|.|+|.|+|..|.|++ ..+...|
T Consensus 139 ~~~~~~~~~~~~~~-----~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~-~~~~~~t 192 (290)
T 3l5i_A 139 SDKAPCITDWQQED-----GTVHRTYLRGNLAESKCYLITVTPVYADGPGSP-ESIKAYL 192 (290)
T ss_dssp CSSSCCCCEEEEEE-----TTCSEEECCSCCCTTCEEEEEEEEEETTEECCC-EEEEEES
T ss_pred CCCCCCCcCeEEcc-----CCCcceEEecCcCCccEEEEEEEEEeCCccccc-EEEEeEc
Confidence 633 244332 123467788999999999999999999999995 4444444
No 251
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.77 E-value=1.1e-18 Score=149.56 Aligned_cols=159 Identities=22% Similarity=0.299 Sum_probs=109.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EECc---CC--CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELLN---SE--TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l~---~~--~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.+.|+|++ ..+. .. .......+|+... ..+|.|.+++ .+|+|.|+|.+.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 91 (213)
T 3nl4_L 13 EPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLE-CADAATYYCQST 91 (213)
T ss_dssp EETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCC-GGGCEEEEEEEC
T ss_pred EcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCC-hHHCEEEEEecC
Confidence 358999999999998889999999942 1110 00 0000123566543 2379999999 999999999999
Q ss_pred cccCc---eEeeEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCCeEEEEECCEEecCCC---------
Q psy14886 70 NQLKT---RYSSAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGG--------- 134 (505)
Q Consensus 70 ~~~~~---~~~~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~~i~W~~~g~~~~~~~--------- 134 (505)
+..+. ....+.+.|.. .+|.+...+ ....+.+|+.++|.|.+.+ .|.+.+.|+++|..+..+.
T Consensus 92 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~--~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~ 169 (213)
T 3nl4_L 92 YENPTYVSFGGGTEVGVKGDPVAPTVLIFP--PSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNS 169 (213)
T ss_dssp CSSTTTCEECCCEEEEEECCCBCCEEEEEC--CCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCT
T ss_pred CCCceeEEeCCCeEEEEeCCCcCCeEEEeC--CchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccC
Confidence 87663 22345666643 233333222 1223557999999999988 7888999999999876421
Q ss_pred -cEEEeeCCCEEEcCCCCCCCEEEEEEEE
Q psy14886 135 -RRKIFENGNLLISPVSRDDSGIYSCTAT 162 (505)
Q Consensus 135 -~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 162 (505)
.......+.|.|.++..+|+|.|+|.|.
T Consensus 170 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 170 ADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 0011112358899999999999999998
No 252
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.77 E-value=3.5e-18 Score=146.18 Aligned_cols=178 Identities=13% Similarity=0.121 Sum_probs=120.2
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEE--EeeCC--CEEEcCCCCCCCEEEEEEEE
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK--IFENG--NLLISPVSRDDSGIYSCTAT 162 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~--~~~~~--~l~i~~v~~~d~G~y~C~~~ 162 (505)
+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+....... ....+ .|.|.+++.+|+|.|+|.+.
T Consensus 9 ~P~i~~~p~---~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 9 MPFISAKSS---PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp CCCEEESSC---SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEecCC---CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 444544442 36889999999999987 577999999886553221111 12234 79999999999999999999
Q ss_pred cCCCcee--eeEEEEEEeC--CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeee
Q psy14886 163 NVHGMDE--SKGRLIVLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 238 (505)
Q Consensus 163 ~~~g~~~--~~~~l~v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 238 (505)
|..+... ..+.|.|... ++.+...+ ...+..|+.++|.|...+.+. ..+.|+++|..+... .....
T Consensus 85 n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~--~~~~W~k~g~~~~~~-------~~~~~ 154 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPF--DRFSLAKEGELSLPQ-------HQSGE 154 (218)
T ss_dssp ETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCC--SEEEEEETTCSSCCS-------EEECS
T ss_pred cCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCC--CEEEEEECCCccccc-------ccCCC
Confidence 9766433 3467777652 22232223 456789999999996655444 467899998765431 11122
Q ss_pred cCCeEEEecCCCCCCEEEEEEEEecCC-----cEEEEEEEEEcCC
Q psy14886 239 DGGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVEGP 278 (505)
Q Consensus 239 ~~~~l~i~~~~~~~~g~y~C~~~n~~g-----~~~~~~~l~v~~~ 278 (505)
....|.|.++..+|+|.|+|.|.|... ..+..+.|.|.+.
T Consensus 155 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 155 HPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp SSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred ccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 456899999999999999999998642 2334566666553
No 253
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.77 E-value=2.7e-18 Score=149.81 Aligned_cols=161 Identities=20% Similarity=0.298 Sum_probs=108.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEECc------CCC--CCCCCCCcEEEE-----CCeEEEEcCCCCCCCeEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GELLN------SET--LPLEDQDRYFIQ-----DNVLTIRYLNPERDPAMYQ 65 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~------~~~--~~~~~~~~~~~~-----~~~L~i~~~~~~~d~G~Y~ 65 (505)
+.+|++++|.|. .+.|.+.|.|+|+ +..+. ... .......|+.+. ..+|.|.+++ .+|+|.|+
T Consensus 12 v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~-~~DsG~Y~ 89 (238)
T 2p1y_A 12 AVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT-PSQTSVYF 89 (238)
T ss_dssp EETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC-GGGCEEEE
T ss_pred EeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC-cccCeeEE
Confidence 468999999999 6778899999995 21110 000 000113455543 3489999999 99999999
Q ss_pred EEEEcccCce-----EeeEEEEEEecCC-----------CccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECC--
Q psy14886 66 CRAKNQLKTR-----YSSAQLRVLTLKP-----------SFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-- 127 (505)
Q Consensus 66 C~~~~~~~~~-----~~~~~l~v~~~~p-----------~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g-- 127 (505)
|.+.+..+.. .....|.|...++ .+... +....+.+|++++|.|.+.+.|.+.+.|++++
T Consensus 90 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~ 167 (238)
T 2p1y_A 90 CASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQS--PQSLTVWEGETAILNCSYENSAFDYFPWYQQFPG 167 (238)
T ss_dssp EEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEE--CSEEEEETTSCEEEEEECCCTTCCEEEEEEECTT
T ss_pred EEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEcc--CceEEEeCCCeEEEEEEEecCCCCcEEEEEECCC
Confidence 9999875421 1235677765332 22222 24567899999999999999988999999953
Q ss_pred E---Ee---------cCCCcEEEee-----CCCEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 128 N---II---------GSGGRRKIFE-----NGNLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 128 ~---~~---------~~~~~~~~~~-----~~~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
. .+ ....++.+.. ..+|.|.+++.+|+|.|+|.|.|..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 168 EGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp SCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 1 11 1123444331 1369999999999999999999874
No 254
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=146.89 Aligned_cols=157 Identities=15% Similarity=0.198 Sum_probs=102.5
Q ss_pred EeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcE--EEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce--eeeEEEE
Q psy14886 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR--KIFENGNLLISPVSRDDSGIYSCTATNVHGMD--ESKGRLI 175 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~--~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~--~~~~~l~ 175 (505)
.+.+|++++|.|.+.+.|. .+.|+|+|..+...... .....+.|.|.++..+|+|.|+|.+.|..|.. ...+.|.
T Consensus 15 ~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~ 93 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELV 93 (196)
T ss_dssp EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEE
T ss_pred cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEE
Confidence 5889999999999988765 99999999866432110 01123469999999999999999999877643 3447777
Q ss_pred EEeC--CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeee---ecCCeEEEecCCC
Q psy14886 176 VLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN---IDGGLLEITNASF 250 (505)
Q Consensus 176 v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~ 250 (505)
|... ++.+.. .+...+..|+.++|.|.+.+.+ + .+.|++++..+...... .... .....|.|.+++.
T Consensus 94 V~~~~~~p~i~~-~~~~~v~~G~~v~L~C~~~~~p-~--~~~W~k~g~~~~~~~~~----~~~~~~~~~~~~L~I~~v~~ 165 (196)
T 2d3v_A 94 VTGFYNKPTLSA-LPSPVVTSGENVTLQCGSRLRF-D--RFILTEEGDHKLSWTLD----SQLTPSGQFQALFPVGPVTP 165 (196)
T ss_dssp EECSSCCCEEEC------------CEEEEEESSCC-S--EEEEEEC---CCEEEEE----CEECTTSCEEEEEECCCCBT
T ss_pred ecCCCCCCeEEc-cCCccccCCCcEEEEEEcCCCC-C--EEEEEccCCcccccccc----cccccCCCceeEEEeeecCc
Confidence 7663 222222 2335678999999999998876 3 67899998776421100 0011 1125899999999
Q ss_pred CCCEEEEEEEEecCC
Q psy14886 251 ADAGEYECVVKSTVG 265 (505)
Q Consensus 251 ~~~g~y~C~~~n~~g 265 (505)
+|.|.|+|.|.|..+
T Consensus 166 ~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 166 SHRWMLRCYGSRRHI 180 (196)
T ss_dssp TBCEEEEEEEEETTE
T ss_pred ccCeeEEEEEEccCC
Confidence 999999999999764
No 255
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.76 E-value=6e-18 Score=144.90 Aligned_cols=173 Identities=18% Similarity=0.202 Sum_probs=119.6
Q ss_pred eEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEEe----c--------CCCcEEEee---CCCEEEcCCCCCCCEEEEEE
Q psy14886 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNII----G--------SGGRRKIFE---NGNLLISPVSRDDSGIYSCT 160 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~~----~--------~~~~~~~~~---~~~l~i~~v~~~d~G~y~C~ 160 (505)
.+.+.+|++++|.|.+.+.+.+.+.|++. +... . ...++.... +.+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 57799999999999999889999999982 2211 0 123444322 23599999999999999999
Q ss_pred EEcCCC---ceeeeEEEEEE----eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCccc-
Q psy14886 161 ATNVHG---MDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE- 232 (505)
Q Consensus 161 ~~~~~g---~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~- 232 (505)
+.+..+ .....+.|.|. .+|.+... +....+..|+.+.|.|.+.+.+++.+.+.|+++|..+.........
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 167 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLF-PPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPS 167 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCE
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEcc-CCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcC
Confidence 999887 33445778887 33443332 2222333689999999999875555688899999988642100000
Q ss_pred -CCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEE
Q psy14886 233 -TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 271 (505)
Q Consensus 233 -~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~ 271 (505)
........+.|.|..+..+|.|.|+|.|.|..+.....+
T Consensus 168 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 168 KSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp EETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred ccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 011111234588888888999999999999887655544
No 256
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.76 E-value=7e-19 Score=150.30 Aligned_cols=168 Identities=24% Similarity=0.366 Sum_probs=123.6
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEe------------cCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNII------------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~------------~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
....+.+|+++.|.|.+.+.|.+.+.|++++..+ ....+.... ...|.|.+++.+|+|.|+|.+.+.
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~~~~~d~G~Y~C~~~~~ 90 (209)
T 1nbq_A 12 PEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-PTGITFKSVTREDTGTYTCMVSEE 90 (209)
T ss_dssp SBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-TTEEECSCCCTTSCSEEEEEEEET
T ss_pred CceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-ccEEEEeeCCHHHCcEEEEEEecC
Confidence 4456889999999999998888999999976542 112333333 377999999999999999999998
Q ss_pred CCc--eeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEe-eecCCCCeEEEEEeCCEEecCCCCCc--c--cCCeee
Q psy14886 165 HGM--DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNE--L--ETPNIN 237 (505)
Q Consensus 165 ~g~--~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~~~w~~~~~~~~~~~~~~--~--~~~~~~ 237 (505)
.|. ....+.|.|..+|..... .....+..|+.+.|.|.+ .+.|.+ .+.|++++..+....... . ......
T Consensus 91 ~g~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (209)
T 1nbq_A 91 GGNSYGEVKVKLIVLVPPSKPTV-NIPSSATIGNRAVLTCSEQDGSPPS--EYTWFKDGIVMPTNPKSTRAFSNSSYVLN 167 (209)
T ss_dssp TSSCEECCEEECCEEBCCCCCCC-CCBSEEETTSCEEECCCCCSCBSCC--EEEEEETTCCCCSCSSSSSSCTTCCCCCC
T ss_pred CCCccceEEEEEEEecCCcCCCc-ccccceecCCEEEEEEeCCCCCCCc--eeEEEECCeeCCCccccceeeeccceEEc
Confidence 653 344567777776665433 234567889999999997 777665 677999988775532110 0 011112
Q ss_pred ecCCeEEEecCCCCCCEEEEEEEEecCCcEE
Q psy14886 238 IDGGLLEITNASFADAGEYECVVKSTVGKIS 268 (505)
Q Consensus 238 ~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~ 268 (505)
.....|.|..+..+|.|.|+|.|.|..|...
T Consensus 168 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 198 (209)
T 1nbq_A 168 PTTGELVFDPLSASDTGEYSCEARNGYGTPM 198 (209)
T ss_dssp TTTCCEEESSCCGGGCCCEEEEEECSSSCCE
T ss_pred CCcceEEEEeccccCCeEEEEEEeCCcCccc
Confidence 2457899999999999999999999999873
No 257
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.76 E-value=9.5e-18 Score=147.53 Aligned_cols=160 Identities=19% Similarity=0.296 Sum_probs=108.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCE-----ECcC--CCCCCCCCCcEEEEC----CeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGE-----LLNS--ETLPLEDQDRYFIQD----NVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~-----~l~~--~~~~~~~~~~~~~~~----~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.+.|+|++. .+.. ........+|+.... .+|.|.+++ .+|+|.|+|.+.
T Consensus 16 v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 94 (250)
T 3esu_F 16 ASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLE-QEDIGTYFCQQG 94 (250)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCEEEEEEEC
T ss_pred eeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCC-hhhCEEEEEEEe
Confidence 4689999999999988888999999531 1100 000011235665432 279999999 999999999999
Q ss_pred cccCceEe-eEEEEEEec------------------CCCccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEEEC--
Q psy14886 70 NQLKTRYS-SAQLRVLTL------------------KPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKD-- 126 (505)
Q Consensus 70 ~~~~~~~~-~~~l~v~~~------------------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~-- 126 (505)
|..+.... ...|.|... ++.+... +....+.+|++++|.|.+.+.+ .+.+.|+++
T Consensus 95 n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~ 172 (250)
T 3esu_F 95 NTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQ--SGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRP 172 (250)
T ss_dssp SSSSCEECCCEEEEEC------------------------CEE--CCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECT
T ss_pred eCCCceECCCEEEEEECCCCcccccccccccccCcccceEEec--CCceEEcCCceEEEEEEecCCcccCCEEEEEEECC
Confidence 86654333 345666542 1111122 2446689999999999998876 779999996
Q ss_pred CEEec-----------------CCCcEEEeeCC-----CEEEcCCCCCCCEEEEEEEEc
Q psy14886 127 GNIIG-----------------SGGRRKIFENG-----NLLISPVSRDDSGIYSCTATN 163 (505)
Q Consensus 127 g~~~~-----------------~~~~~~~~~~~-----~l~i~~v~~~d~G~y~C~~~~ 163 (505)
+..+. ...++.+..+. +|.|.+++.+|+|.|+|.+.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 173 GQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp TSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 43221 11344444322 599999999999999999997
No 258
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.76 E-value=4e-18 Score=150.11 Aligned_cols=178 Identities=19% Similarity=0.227 Sum_probs=117.1
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEEC--CEECcC----------CCCCCCCCCcEEEE--C----CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRN--GELLNS----------ETLPLEDQDRYFIQ--D----NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~--~~~l~~----------~~~~~~~~~~~~~~--~----~~L~i~~~~~~~d 60 (505)
|.+|++++|.|.+.+.+ .+.+.|+|. +..+.. ........+|+.+. . .+|.|.+++ .+|
T Consensus 13 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~D 91 (253)
T 3uzq_A 13 VKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLT-SGD 91 (253)
T ss_dssp ECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred ecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCC-ccc
Confidence 46899999999998754 689999992 211100 00000123466553 1 249999999 999
Q ss_pred CeEEEEEEEcccCceE-eeEEEEEEec--------------CCCccCCCCCceEEeeCCCeEEEEeecCCCCCC----eE
Q psy14886 61 PAMYQCRAKNQLKTRY-SSAQLRVLTL--------------KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP----KF 121 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~~-~~~~l~v~~~--------------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~----~i 121 (505)
+|.|+|.+.+..+... ..+.|.|... ++.+... +....+.+|++++|.|.+.+.+.+ .+
T Consensus 92 sG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v 169 (253)
T 3uzq_A 92 TAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQT--PASLAVSLGQRATISCRASENVDRYGNSFM 169 (253)
T ss_dssp CEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEE--CSEEEECTTSCEEEEEEESSCCEETTEECE
T ss_pred CEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECc--CCeEEEeCCCCEEEEEEecCccccCCCcEE
Confidence 9999999998655443 3466777632 2223222 245678999999999999988776 99
Q ss_pred EEEEC--CEEec------------CCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEcCCCceeee-EEEEEEeCCe
Q psy14886 122 VWKKD--GNIIG------------SGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPS 181 (505)
Q Consensus 122 ~W~~~--g~~~~------------~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~~p~ 181 (505)
.|+++ +.... ...++.....+ +|.|.+++.+|+|.|+|.+.|..+..-.. ..|.|...++
T Consensus 170 ~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~ 247 (253)
T 3uzq_A 170 HWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPLE 247 (253)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC--
T ss_pred EEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCCC
Confidence 99984 22111 11333332222 49999999999999999999876544443 5677755443
No 259
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.76 E-value=8.8e-18 Score=149.87 Aligned_cols=163 Identities=17% Similarity=0.277 Sum_probs=110.4
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCE-----ECcCC--CCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGE-----LLNSE--TLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~-----~l~~~--~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
|.+|++++|.|.+.+.|.+.+.|+|++. .+... ........|+.+. + .+|.|.+++ .+|+|.|+|.+.
T Consensus 24 v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~DsG~Y~C~~~ 102 (276)
T 3auv_A 24 ASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ-PEDFATYYCQQH 102 (276)
T ss_dssp CCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCEEEEEEEC
T ss_pred EcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC-hhhCEEEEEEEe
Confidence 5789999999999988889999999642 11100 0000123566553 1 389999999 999999999999
Q ss_pred cccCceE-eeEEEEEEecC------------CCccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEEECC--EEe--
Q psy14886 70 NQLKTRY-SSAQLRVLTLK------------PSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII-- 130 (505)
Q Consensus 70 ~~~~~~~-~~~~l~v~~~~------------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g--~~~-- 130 (505)
|..+... ..+.|.|...+ |.+.+.. +....+.+|++++|.|.+.+.+ .+.+.|++++ ...
T Consensus 103 n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~-p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~ 181 (276)
T 3auv_A 103 YTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEW 181 (276)
T ss_dssp SSSSCCCCCCEEEEC-----------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEE
T ss_pred cCCcccccCCEEEEEecCCCccccccccccCcceEEEC-CCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEE
Confidence 8654422 23566666421 2222211 2346789999999999998876 5799999953 211
Q ss_pred ---------------cCCCcEEEeeC-----CCEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 131 ---------------GSGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 131 ---------------~~~~~~~~~~~-----~~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
....++.+..+ .+|.|.+++.+|+|.|+|.|.|..
T Consensus 182 l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 182 VAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF 236 (276)
T ss_dssp EEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred EEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence 01235554432 269999999999999999999973
No 260
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.76 E-value=1.6e-17 Score=146.60 Aligned_cols=163 Identities=18% Similarity=0.298 Sum_probs=110.2
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEECC--EECc---C---C----CCCCCCCCcEEEE--C----CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRNG--ELLN---S---E----TLPLEDQDRYFIQ--D----NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~~--~~l~---~---~----~~~~~~~~~~~~~--~----~~L~i~~~~~~~d 60 (505)
|.+|++++|.|.+.+. +.+.+.|+|.. ..+. . . .......+|+.+. . .+|.|.+++ .+|
T Consensus 18 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 96 (256)
T 3juy_B 18 KKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLR-SAD 96 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred ecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCC-ccc
Confidence 4689999999999873 57899999832 1110 0 0 0011123577664 2 369999999 999
Q ss_pred CeEEEEEEEcc------------cCceEeeEEEEEEecC--------------CCccCCCCCceEEeeCCCeEEEEeecC
Q psy14886 61 PAMYQCRAKNQ------------LKTRYSSAQLRVLTLK--------------PSFKKRPLESETYAGEGGNVTIFCNPE 114 (505)
Q Consensus 61 ~G~Y~C~~~~~------------~~~~~~~~~l~v~~~~--------------p~~~~~~~~~~~~v~~g~~v~l~C~~~ 114 (505)
+|.|.|.+.+. .......+.|.|...+ +.+... +....+.+|++++|.|.+.
T Consensus 97 sG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~ 174 (256)
T 3juy_B 97 TAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQA--PGTLSLSPGERATFSCRSS 174 (256)
T ss_dssp CEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEE--CSEEEECTTSCEEEEEEES
T ss_pred CEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEec--CCeEEEeCCCCEEEEEEEC
Confidence 99999999886 2222334667776521 122222 3556789999999999998
Q ss_pred CCCC-CeEEEEEC--CEEec------------CCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEcCCC
Q psy14886 115 AAPK-PKFVWKKD--GNIIG------------SGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHG 166 (505)
Q Consensus 115 ~~p~-~~i~W~~~--g~~~~------------~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~g 166 (505)
+.+. +.+.|++. +..+. ...++....++ +|.|.+++.+|+|.|+|.|.+...
T Consensus 175 ~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 175 HSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 8775 89999982 22111 12344433333 499999999999999999988544
No 261
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.76 E-value=5.1e-19 Score=152.22 Aligned_cols=167 Identities=19% Similarity=0.292 Sum_probs=109.3
Q ss_pred CCCCCceEEEEEEecc-CCCeEEEEECC--EEC---c-CC-----CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEE
Q psy14886 1 MDNQADLTWTCEAFGV-PDVTYSWFRNG--ELL---N-SE-----TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMY 64 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~-p~~~~~W~~~~--~~l---~-~~-----~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y 64 (505)
+.+|++++|.|.+.+. |.+.+.|+|.+ ... . .. .......+|+.+. ..+|.|.+++ .+|+|.|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y 90 (218)
T 3s96_B 12 FSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQ-PEDEAIY 90 (218)
T ss_dssp EETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCC-GGGCEEE
T ss_pred ECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCC-cccCEEE
Confidence 3589999999999988 88999999932 100 0 00 0000123466542 3479999999 9999999
Q ss_pred EEEEEcccC-----ceEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEecCCC
Q psy14886 65 QCRAKNQLK-----TRYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSGG 134 (505)
Q Consensus 65 ~C~~~~~~~-----~~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~~~~ 134 (505)
+|.+.+..+ .....+.|.|.. .+|.+...+ ....+..|+.++|.|.+.+ .|.+ .+.|+++|..+..+.
T Consensus 91 ~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~--~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 168 (218)
T 3s96_B 91 ICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFP--PSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGV 168 (218)
T ss_dssp EEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEEC--CCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC----
T ss_pred EEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeC--CCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCce
Confidence 999998765 223346777774 234443322 1122456789999999988 4666 999999999886421
Q ss_pred cE--EEeeC------CCEEEcCCCCCCCEEEEEEEEcCCCceee
Q psy14886 135 RR--KIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDES 170 (505)
Q Consensus 135 ~~--~~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~ 170 (505)
.. ....+ ..|.|..+..+|+|.|+|.|.|..+....
T Consensus 169 ~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 212 (218)
T 3s96_B 169 DTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEK 212 (218)
T ss_dssp ----------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEE
T ss_pred ecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccc
Confidence 11 01112 23777777788899999999998765443
No 262
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.76 E-value=2e-18 Score=143.94 Aligned_cols=147 Identities=15% Similarity=0.179 Sum_probs=109.1
Q ss_pred EeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce--eeeEEEEEE
Q psy14886 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD--ESKGRLIVL 177 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~--~~~~~l~v~ 177 (505)
.+.+|++++|.|.+.+ +.+.+.|+|+|.. .....+.|.|.+++.+|+|.|+|.+.|..|.. ...+.|.|.
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~-------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~ 89 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS-------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVAT 89 (184)
T ss_dssp EEETTCCEEEEEECST-TCSEEEEEETTTC-------CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEE
T ss_pred cccCCCcEEEEEeCCC-CCCEEEEEECCcc-------ccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEec
Confidence 6889999999999987 6789999998865 12345679999999999999999999977632 334677775
Q ss_pred eC--CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEE
Q psy14886 178 HG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 255 (505)
Q Consensus 178 ~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~ 255 (505)
.. ++.+...+ ...+..|+.+.|.|.+.+.+ ..+.|+++|..+.... ........|.|..+..+|.|.
T Consensus 90 ~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~---~~~~w~k~g~~~~~~~-------~~~~~~~~L~i~~v~~~D~G~ 158 (184)
T 2gi7_A 90 GVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF---DQFALYKEGDPAPYKN-------PERWYRASFPIITVTAAHSGT 158 (184)
T ss_dssp SSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC---CEEEEEECCCCTTSCC-------CCEEEEESSSEEEETTCCSEE
T ss_pred CcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC---cEEEEEECCCcCccee-------cCCCceEEEEEccCCccCCeE
Confidence 42 22222222 34567899999999986543 3678999987664411 112234578889999999999
Q ss_pred EEEEEEecCC
Q psy14886 256 YECVVKSTVG 265 (505)
Q Consensus 256 y~C~~~n~~g 265 (505)
|+|.|.|..+
T Consensus 159 Y~C~a~n~~~ 168 (184)
T 2gi7_A 159 YRCYSFSSRD 168 (184)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 9999999754
No 263
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.76 E-value=1.9e-17 Score=146.20 Aligned_cols=175 Identities=17% Similarity=0.219 Sum_probs=114.0
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEECC--EE--Cc----CC---CCCCCCCCcEEEEC------CeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRNG--EL--LN----SE---TLPLEDQDRYFIQD------NVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~~--~~--l~----~~---~~~~~~~~~~~~~~------~~L~i~~~~~~~d~ 61 (505)
|.+|++++|.|.+.+. +.+.+.|+|.. .. +. .. .......+|+.+.. .+|.|.+++ .+|+
T Consensus 20 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~Ds 98 (257)
T 3gkz_A 20 VKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS-SEDT 98 (257)
T ss_dssp ECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC-GGGC
T ss_pred EcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC-hhhC
Confidence 4689999999999884 47899999932 11 10 00 00001235666531 279999999 9999
Q ss_pred eEEEEEEEcccC--c--eEeeEEEEEEec-------------CCCccCCCCCceEEeeCCCeEEEEeecCCCCCC-eEEE
Q psy14886 62 AMYQCRAKNQLK--T--RYSSAQLRVLTL-------------KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP-KFVW 123 (505)
Q Consensus 62 G~Y~C~~~~~~~--~--~~~~~~l~v~~~-------------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~-~i~W 123 (505)
|.|+|.+.+..+ . ....+.|.|... ++.+... +....+.+|++++|.|.+.+.+.+ .+.|
T Consensus 99 G~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~v~W 176 (257)
T 3gkz_A 99 ATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQS--PAIMSASPGEKVTLTCSASSSVSSSHLYW 176 (257)
T ss_dssp EEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECS--CSEEEECTTCCEEEEEEESSCCCGGGEEE
T ss_pred EEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcC--CceEEEeCCCcEEEEEEEccCccceEEEE
Confidence 999999998621 1 223466777653 1222222 345778999999999999988777 9999
Q ss_pred EEC--CEEec------------CCCcEEEeeC---CCEEEcCCCCCCCEEEEEEEEcCCCceeee-EEEEEEe
Q psy14886 124 KKD--GNIIG------------SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVLH 178 (505)
Q Consensus 124 ~~~--g~~~~------------~~~~~~~~~~---~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~ 178 (505)
+++ +..+. ...++..... .+|.|.+++.+|+|.|+|.|.+.....-.. ..|.|..
T Consensus 177 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~ 249 (257)
T 3gkz_A 177 YQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKR 249 (257)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEe
Confidence 983 32211 0133333322 249999999999999999998754433333 4566644
No 264
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.76 E-value=1.9e-18 Score=151.82 Aligned_cols=171 Identities=13% Similarity=0.199 Sum_probs=108.0
Q ss_pred CCCCCceEEEEEEeccCCCe-----EEEEECCEECcCC---------CC-CCCCCCcEE-----EECCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVPDVT-----YSWFRNGELLNSE---------TL-PLEDQDRYF-----IQDNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~-----~~W~~~~~~l~~~---------~~-~~~~~~~~~-----~~~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.|.+. |.|+|++...... .. ......++. ..+.+|.|.+++ .+|
T Consensus 15 v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~-~~D 93 (248)
T 3pv7_A 15 TPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQ-LEE 93 (248)
T ss_dssp EETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCC-GGG
T ss_pred EeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCC-HHH
Confidence 35799999999998876554 9999964322100 00 000001110 013469999999 999
Q ss_pred CeEEEEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEecCC-----
Q psy14886 61 PAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSG----- 133 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~~~----- 133 (505)
+|.|+|.+.+..+.....+.|.|.. +|.+...+. ..+..|+.+.|.|.+.+ .|.+ .+.|+++|..+...
T Consensus 94 ~G~Y~C~~~~~~~~~~~~~~L~V~~-~P~v~~~~~---~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~ 169 (248)
T 3pv7_A 94 AGEYRCEVVVTPLKAQGTVQLEVVA-SPASRLLLD---QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISE 169 (248)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEB-CCEEEEECC-----------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECT
T ss_pred CeEEEEEEEeCCccceeEEEEEEec-CCceEEecC---CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcccccc
Confidence 9999999998877777778888885 666555432 23456788889999988 7888 99999988543211
Q ss_pred -C---cEEEee------CCCEEEcCCCCCCCEEEEEEEEcCCCceee--eEEEEE
Q psy14886 134 -G---RRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDES--KGRLIV 176 (505)
Q Consensus 134 -~---~~~~~~------~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~--~~~l~v 176 (505)
. ...... ...|.+.....+|.|.|+|.|.|..+.... .+.|.|
T Consensus 170 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 170 DVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp TEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 0 011111 124778888889999999999998886444 455555
No 265
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.75 E-value=7.8e-18 Score=140.39 Aligned_cols=145 Identities=15% Similarity=0.270 Sum_probs=107.3
Q ss_pred EeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcC-CCCCCCEEEEEEEEcCCCceeeeEEEEEEe
Q psy14886 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLH 178 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~-v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~ 178 (505)
....|+++.|.|.+.+ +. .+.|+|+|..+... .+++|.|.+ +..+|+|.|+|.|.|..|.....+.+.|..
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~ 81 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGS 81 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCS
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 4578999999999987 43 49999999988753 245799999 999999999999999988755544444432
Q ss_pred CCeeee---------------------eCCCce---EEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCC
Q psy14886 179 GPSYYE---------------------QLPPKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 234 (505)
Q Consensus 179 ~p~~~~---------------------~~~~~~---~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 234 (505)
.+.... ...... .+..|+.+.|.|.+ |.| .+.|+++|..+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p--~i~W~k~g~~i~~~~------- 149 (186)
T 1jbj_A 82 ADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDK--TIKWLKDGSIISPLN------- 149 (186)
T ss_dssp CCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCS--CEEEEETTEECCCSS-------
T ss_pred ccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCC--eEEEEECCEECcccC-------
Confidence 211100 000011 23389999999998 444 567999999886421
Q ss_pred eeeecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 235 NINIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 235 ~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
.....|.|..+..+|.|.|+|.|.|..|..
T Consensus 150 ---~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 150 ---ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp ---CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ---CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 145689999999999999999999988865
No 266
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=7.1e-18 Score=130.01 Aligned_cols=114 Identities=21% Similarity=0.251 Sum_probs=92.3
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeee-ccccccEEEEEEeCCccccCCCCceEEEEEEEcCC---CCcEEEEeeecC
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGG-GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND---TEFQSETLKEYG 443 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~-~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~---~~~~~~~~~~~~ 443 (505)
|.|.+|... .+.|.+..|+.+|.++++. ..+.++|.|.|++|+....+|.|++|+|+|+..+. ..|... +. .
T Consensus 1 G~g~~S~~v-~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~~--~ 76 (124)
T 2dbj_A 1 GSSGSSGWI-LASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEE-VG--Q 76 (124)
T ss_dssp CCSCCCCCC-CCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEE-EE--S
T ss_pred CcCCCCCCE-EEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEE-eC--C
Confidence 567777765 7888899999999999998 57889999999997657899999999999985432 233211 11 1
Q ss_pred ceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 444 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 444 ~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
..+.+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.+.|.+.
T Consensus 77 --~~~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 77 --NGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp --TTSCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred --CcceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 235678899999999999999999999999999999998753
No 267
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.75 E-value=8.4e-18 Score=144.00 Aligned_cols=169 Identities=17% Similarity=0.231 Sum_probs=116.3
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC--EEe----------c--CCCcEEEeeCC---CEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NII----------G--SGGRRKIFENG---NLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~~~----------~--~~~~~~~~~~~---~l~i~~v~~~d~G~y~C 159 (505)
..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+ . ...++.....+ +|.|.+++.+|+|.|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3d9a_L 9 ATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFC 88 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred ccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEE
Confidence 4567899999999999999988899999842 211 1 12344444332 69999999999999999
Q ss_pred EEEcCCCceeee-EEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCC-----c
Q psy14886 160 TATNVHGMDESK-GRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN-----E 230 (505)
Q Consensus 160 ~~~~~~g~~~~~-~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~-----~ 230 (505)
.+.+..+..... ..|.|.. +|.+....+ ......|+.+.|.|.+.+.+++.+.+.|+++|..+...... .
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~-~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 167 (213)
T 3d9a_L 89 QQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP-SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQD 167 (213)
T ss_dssp EECSSSSCEECCCEEEEECCCCBCCEEEEECC-CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCC
T ss_pred eeecCCcceeCCCEEEEEecCCCCceeEeECC-ChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCcc
Confidence 999887754333 4677754 343333222 22233688999999998854444578899999987653100 0
Q ss_pred ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 231 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 231 ~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
..... ....+.|.|..+..+|.|.|+|.|.|.....
T Consensus 168 ~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 168 SKDST-YSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp TTTCC-EEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCCCC-EEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 00011 1122478999999999999999999977653
No 268
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.75 E-value=4.5e-18 Score=139.31 Aligned_cols=153 Identities=14% Similarity=0.138 Sum_probs=107.4
Q ss_pred CCCCceEEEEEEeccCCCeEEEEECCEECcCCC---C--CCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEEcccCc
Q psy14886 2 DNQADLTWTCEAFGVPDVTYSWFRNGELLNSET---L--PLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAKNQLKT 74 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~---~--~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~ 74 (505)
.+|++|+|.|.+.+ |.+.|.|+|++..+.... . .....+|+.+ .+++|.|.+++ .+|+|.|+|.+.+..+
T Consensus 8 ~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~-~~DsG~Y~C~~~n~~~- 84 (171)
T 1ccz_A 8 VVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLT-SSDEDEYEMESPNITD- 84 (171)
T ss_dssp ETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCC-GGGCEEEEEECTTCCS-
T ss_pred EcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCC-hhhCceEEEEEeCCCC-
Confidence 47999999999854 789999999987542110 0 0012346655 46899999999 9999999999988776
Q ss_pred eEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCC
Q psy14886 75 RYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDS 154 (505)
Q Consensus 75 ~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~ 154 (505)
...+.|.|...++. +.+..... ...|.|.+.+.|.+.+.|+++|..+.... ...|.+. ...|.
T Consensus 85 -~~~~~L~V~~~~~~-------p~i~~~~~-~~~L~C~~~~~p~p~i~W~~~~~~l~~~~------~~~l~~~--~~~~~ 147 (171)
T 1ccz_A 85 -TMKFFLYVLEMVSK-------PMIYWECS-NATLTCEVLEGTDVELKLYQGKEHLRSLR------QKTMSYQ--WTNLR 147 (171)
T ss_dssp -CEEEEEEEECCCCC-------CEEEEETT-TTEEEEECSSCSSCEEEEEETTEEEEEES------SSEEEEE--CSCCS
T ss_pred -cEEEEEEEECcCCC-------CEEEEecC-CcEEEEEeCCCCCcEEEEEECCEECcCCc------ceEEEEe--ccCCC
Confidence 55677888753221 11112111 13799999998999999999998875322 1223333 37889
Q ss_pred EEEEEEEEcCCCceeeeEEE
Q psy14886 155 GIYSCTATNVHGMDESKGRL 174 (505)
Q Consensus 155 G~y~C~~~~~~g~~~~~~~l 174 (505)
|.|+|.|.|..+.....+.|
T Consensus 148 g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 148 APFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp SCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEcccCcccceeEE
Confidence 99999999998876665433
No 269
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.75 E-value=6.6e-18 Score=139.60 Aligned_cols=153 Identities=14% Similarity=0.174 Sum_probs=106.9
Q ss_pred CCCCCceEEEEEEec-cCCCeEEEEEC-CEECc---CC-C---CCCCCCCcEEE--ECCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFG-VPDVTYSWFRN-GELLN---SE-T---LPLEDQDRYFI--QDNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~-~p~~~~~W~~~-~~~l~---~~-~---~~~~~~~~~~~--~~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+ .+.+.|.|+|+ +..+. .. . ......+|+.+ .+++|.|.+++ .+|+|.|+|.+.
T Consensus 11 v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~-~~D~G~Y~C~v~ 89 (180)
T 2dru_A 11 AITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVS-KEDRGDYYMRML 89 (180)
T ss_dssp EETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCC-GGGCEEEEEEEE
T ss_pred EEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCC-HHHCeEEEEEEE
Confidence 358999999999854 34689999994 33221 00 0 00112367776 46789999999 999999999998
Q ss_pred cccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcC
Q psy14886 70 NQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP 148 (505)
Q Consensus 70 ~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~ 148 (505)
+.. .....+.|.|.+.++ .+.+. ..+..++|.|.+ .+ |.+.+.|++++..+.. ..+.+|.+..
T Consensus 90 ~~~-~~~~~~~L~V~~~~~-------~P~i~-~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~------~~~~~l~~~~ 153 (180)
T 2dru_A 90 HET-EDQWKITMEVYEMVS-------KPMIY-WECSNATLTCEVLEG-TDVELKLYQGKEHLRS------LRQKTMSYQW 153 (180)
T ss_dssp SSS-EEEEEEEEEEECCCC-------CCEEE-EEGGGTEEEEECSSC-TTCEEEEEETTEEEEE------ESSSEEEEEC
T ss_pred cCC-eEEEEEEEEEECCCC-------CCEEE-ecCCCEEEEEEeCCC-CCCEEEEEECCeECcC------CCCCEEEEEE
Confidence 765 445567777875221 12222 245679999999 55 8899999999988751 2234555533
Q ss_pred CCCCCCEEEEEEEEcCCCceeeeE
Q psy14886 149 VSRDDSGIYSCTATNVHGMDESKG 172 (505)
Q Consensus 149 v~~~d~G~y~C~~~~~~g~~~~~~ 172 (505)
.+|+|.|+|.|.|..+...+..
T Consensus 154 --~~d~g~Y~C~a~N~~~~~~~~~ 175 (180)
T 2dru_A 154 --TNLRAPFKCKAVNRVSQESEME 175 (180)
T ss_dssp --SCCSSCEEEEEEETTEEEEEEE
T ss_pred --hhcCccEEEEEecCcCccccce
Confidence 7899999999999988765543
No 270
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.75 E-value=2e-17 Score=148.03 Aligned_cols=175 Identities=19% Similarity=0.249 Sum_probs=115.2
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc---CC-------CCCCCCCCcEEEEC------CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN---SE-------TLPLEDQDRYFIQD------NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~---~~-------~~~~~~~~~~~~~~------~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. .. .......+|+.+.. .+|.|.+++ .+|
T Consensus 38 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 116 (282)
T 1qok_A 38 VRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLT-SED 116 (282)
T ss_dssp EETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred EeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCC-hhh
Confidence 46899999999998865 5889999953 1110 00 00001235666532 489999999 999
Q ss_pred CeEEEEEEEcccC---ceE--eeEEEEEEecC------------CCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEE
Q psy14886 61 PAMYQCRAKNQLK---TRY--SSAQLRVLTLK------------PSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123 (505)
Q Consensus 61 ~G~Y~C~~~~~~~---~~~--~~~~l~v~~~~------------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W 123 (505)
+|.|+|.+.|..+ ... ..+.|.|...+ +...+...+....+.+|++++|.|.+.+.+ +.+.|
T Consensus 117 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W 195 (282)
T 1qok_A 117 TAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SYMHW 195 (282)
T ss_dssp CEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCEE
T ss_pred CEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEE
Confidence 9999999998765 111 24567777532 011111112456789999999999999988 89999
Q ss_pred EE--CCEEec------------CCCcEEEee---CCCEEEcCCCCCCCEEEEEEEEcCCCceee-eEEEEEE
Q psy14886 124 KK--DGNIIG------------SGGRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIVL 177 (505)
Q Consensus 124 ~~--~g~~~~------------~~~~~~~~~---~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~-~~~l~v~ 177 (505)
++ +|..+. ...++.... ..+|.|.++..+|+|.|+|.+.+..+.... ...|.|.
T Consensus 196 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 196 FQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 99 554331 123444332 225999999999999999999875433222 2556664
No 271
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.75 E-value=1.7e-17 Score=141.69 Aligned_cols=169 Identities=19% Similarity=0.271 Sum_probs=114.8
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEEe------------cCCCcEEEeeCC---CEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~~------------~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C 159 (505)
....+.+|++++|.|.+.+.|.+.+.|+++ |..+ ....++.....+ .|.|.+++.+|+|.|+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (210)
T 1lk3_L 8 PALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFC 87 (210)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEE
Confidence 556789999999999999988889999984 2221 112344443322 69999999999999999
Q ss_pred EEEcCCCceee-eEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC-CC---Ccc
Q psy14886 160 TATNVHGMDES-KGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-DL---NEL 231 (505)
Q Consensus 160 ~~~~~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~-~~---~~~ 231 (505)
.+.+..+.... ...|.|.. +|.+....+. .....|+.+.|.|.+.+.+++.+.+.|+++|..+... .. ...
T Consensus 88 ~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 166 (210)
T 1lk3_L 88 QQSWNGPLTFGAGTKLELKRADAAPTVSIFPPS-TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQD 166 (210)
T ss_dssp EECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCC
T ss_pred EEEcCCCceeCCCEEEEEcCCCcCCeEEEECCc-hhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCcc
Confidence 99987764433 34666654 2333332222 2233688999999999865444678899999987653 00 000
Q ss_pred cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 232 ~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.........+.|.|..+..+|.|.|+|.|.|....
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 167 SKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 00001111236889998889999999999997664
No 272
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.75 E-value=2e-18 Score=147.74 Aligned_cols=164 Identities=20% Similarity=0.279 Sum_probs=109.3
Q ss_pred CCCCCceEEEEEEeccC---CCeEEEEECC--EECc---CC--CCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEEEE
Q psy14886 1 MDNQADLTWTCEAFGVP---DVTYSWFRNG--ELLN---SE--TLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMYQC 66 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p---~~~~~W~~~~--~~l~---~~--~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y~C 66 (505)
+.+|++++|.|.+.+.| .+.|.|+|++ ..+. .. ........|+... + .+|.|.+++ .+|+|.|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C 90 (212)
T 1q0x_L 12 TSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQ-TEDEAIYFC 90 (212)
T ss_dssp ECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCEEEEE
T ss_pred ecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCC-ccCCEEEEE
Confidence 46899999999998866 4789999953 2220 00 0000123566542 2 389999999 999999999
Q ss_pred EEEcccCceE-eeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecCCCcE---E
Q psy14886 67 RAKNQLKTRY-SSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGSGGRR---K 137 (505)
Q Consensus 67 ~~~~~~~~~~-~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~~~~~---~ 137 (505)
.+.+..+... ....|.|.. .+|.+...+.. ..+.+|+.++|.|.+.+. |.+ .+.|+++|..+..+... .
T Consensus 91 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 168 (212)
T 1q0x_L 91 ALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPS--SEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPS 168 (212)
T ss_dssp EEECSSCEEECCCEEEEECCSCCBCCEEEEECCC--HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCE
T ss_pred EEecCchhhcCCCeEEEEecCCCCCCeeEEeCCC--HHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCce
Confidence 9998765433 234566642 24444332211 123478999999999875 433 89999999988654211 1
Q ss_pred EeeC------CCEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 138 IFEN------GNLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 138 ~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
...+ ..|.|.++..+|.|.|+|.|.|....
T Consensus 169 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (212)
T 1q0x_L 169 KQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHS 204 (212)
T ss_dssp ECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEE
T ss_pred eCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcc
Confidence 1112 24888888889999999999987544
No 273
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.75 E-value=1.1e-18 Score=150.62 Aligned_cols=168 Identities=17% Similarity=0.263 Sum_probs=111.4
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc------C------CCCCCCCCCcEEEE------CCeEEEEcCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN------S------ETLPLEDQDRYFIQ------DNVLTIRYLNPE 58 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~------~------~~~~~~~~~~~~~~------~~~L~i~~~~~~ 58 (505)
+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. . ........+|+.+. ..+|.|.+++ .
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~ 90 (222)
T 1q9r_B 12 VQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLR-A 90 (222)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCC-G
T ss_pred EcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCC-c
Confidence 46899999999998765 6889999953 2110 0 00000123567653 2489999999 9
Q ss_pred CCCeEEEEEEEcccC-----ceEeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCE
Q psy14886 59 RDPAMYQCRAKNQLK-----TRYSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGN 128 (505)
Q Consensus 59 ~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~ 128 (505)
+|+|.|.|.+.+..+ .....+.|.|... +|.+...+. ...+.+|+.++|.|.+.|. |.+ .+.|+++|.
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 168 (222)
T 1q9r_B 91 EDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAP--GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 168 (222)
T ss_dssp GGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECC--CSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccc--cccccCCCcEEEEEEEccEECCCCEEEEecCCe
Confidence 999999999998654 1223456777642 233322221 1125689999999999885 877 999999987
Q ss_pred EecCCCcEEEee------CCCEEEcCCCCCCCEEEEEEEEcCCCceeeeE
Q psy14886 129 IIGSGGRRKIFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172 (505)
Q Consensus 129 ~~~~~~~~~~~~------~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~ 172 (505)
.+.......... ...|.|.++...| |.|+|.|.|..|......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~ 217 (222)
T 1q9r_B 169 SSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 217 (222)
T ss_dssp CTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEE
Confidence 653211111111 2358898988889 999999999888654443
No 274
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.75 E-value=2.9e-16 Score=140.73 Aligned_cols=250 Identities=13% Similarity=0.099 Sum_probs=139.5
Q ss_pred eeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEeCC
Q psy14886 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 180 (505)
Q Consensus 101 v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p 180 (505)
+..|++++|.|.+...+ .|.|.++|..... ..+++|.|.++...|+|.|+|.+ .+.....+.+.|..++
T Consensus 18 ~~~G~~v~l~C~~~~~~--~i~W~~~~~~~~~------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~~~~ 86 (306)
T 3d85_D 18 DAPGEMVVLTCDTPEED--GITWTLDQSSEVL------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLHKKE 86 (306)
T ss_dssp SCCCEEEEEECSSSCCS--SCEEEETTCCCCC------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEEEEE
T ss_pred CccCCcEEEECCCCCCC--cCEEEECCccccC------CCCCEEEEEecCcCCCceEEEee---CCcccceEEEEEEecc
Confidence 45799999999987433 8999999874321 24678999999999999999999 3555555566554311
Q ss_pred ------eeee-----eCCCceEEEe-eccEEEEEEeeecCCCCeEEE--EEeCC---EEecCCCCCcccCCeeeecCCe-
Q psy14886 181 ------SYYE-----QLPPKITIAA-HRNLQLRCSAHTEELLDVAYI--WTHNG---VRIGNMDLNELETPNINIDGGL- 242 (505)
Q Consensus 181 ------~~~~-----~~~~~~~~~~-g~~~~l~C~~~~~~~~~~~~~--w~~~~---~~~~~~~~~~~~~~~~~~~~~~- 242 (505)
.+.. ..+..+.... +..-.+.|.+..+....+.+. ..+.. ....-.. ...........+..
T Consensus 87 ~~~~~t~i~~~~~~pp~~~~lsC~~~~~~~~~~C~W~pg~~~~l~~~~~~~r~~~~~~~~~C~~-~~~~~~~c~v~~~~~ 165 (306)
T 3d85_D 87 DGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGA-ATLSAERVRGDNKEY 165 (306)
T ss_dssp TTEECCCSSCCCC---CCCCCEEEBSSSSSEEEEEEEESCCSSEEEEEEEEECSSSCEEEEECC-CEEEEEEEC--CEEE
T ss_pred CCcceeeeecccCCCCCCCcceEEcCCcccCcEEEecCCCCCceeEEEEEEecCCCCcceECCC-CCCCccceeecCccc
Confidence 0000 0011222221 111144554444332222111 11100 0000000 00000000000100
Q ss_pred -EEE----ecC----CCCCCEEEEEEEEecCCcEEEEEEEEE--cCCCCCCCceEEEEEeC-CeEEEEeecCCCCCCCC-
Q psy14886 243 -LEI----TNA----SFADAGEYECVVKSTVGKISTKTTVIV--EGPPGLPGGVQVVEVHK-TSATIQWTDGATNGRPI- 309 (505)
Q Consensus 243 -l~i----~~~----~~~~~g~y~C~~~n~~g~~~~~~~l~v--~~~p~~p~~~~~~~~~~-~~v~l~w~~~~~~~~~i- 309 (505)
..+ ... .......+.|.|.|..|..+....+.+ ...|.||.++.+..... ..+.|+|++|...+.+.
T Consensus 166 ~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~ 245 (306)
T 3d85_D 166 EYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHS 245 (306)
T ss_dssp EEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTT
T ss_pred cceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCc
Confidence 111 110 122456789999999997666655544 46799999998877443 79999999987555444
Q ss_pred ---ceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcCCCcCCCCCCC
Q psy14886 310 ---THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 376 (505)
Q Consensus 310 ---~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~ 376 (505)
..|+|+|+..+...|...... ....+ . |.+++.|+|+|+|.|..|.|.+|+++
T Consensus 246 ~~~L~Y~vryr~~~~~~~~~~~~~----------~~ts~---~-l~~~~~Y~vqVRa~~~~~~G~WSeWS 301 (306)
T 3d85_D 246 YFSLTFCVQVQGKSKREKKDRVFT----------DKTSA---T-VICRKNASISVRAQDRYYSSSWSEWA 301 (306)
T ss_dssp TSCEEEEEEEECC------CEEEE----------SSSEE---E-ECCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred eeeEEEEEEEEECCCCccEEEeec----------cccEE---E-EeCCCeEEEEEEeccCCCCCCCCCCC
Confidence 689999998776556543111 11111 2 55799999999999999999999886
No 275
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.75 E-value=4e-17 Score=140.76 Aligned_cols=175 Identities=17% Similarity=0.239 Sum_probs=117.0
Q ss_pred ceEEeeCCCeEEEEeecCCCC-----CCeEEEEECCEEecC---------------CCcEEEeeC------CCEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-----KPKFVWKKDGNIIGS---------------GGRRKIFEN------GNLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-----~~~i~W~~~g~~~~~---------------~~~~~~~~~------~~l~i~~v~ 150 (505)
..+.+.+|+++.|.|.+.+.| ...+.|++++..+.. ..+..+..+ .+|.|.+++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 88 (222)
T 3sbw_C 9 DLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVK 88 (222)
T ss_dssp SEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCC
T ss_pred ccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcc
Confidence 456788999999999987766 348999997643310 133333322 269999999
Q ss_pred CCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeC-CEEecCCCCC
Q psy14886 151 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN-GVRIGNMDLN 229 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~-~~~~~~~~~~ 229 (505)
.+|+|.|+|.+.+ .+.....+.|.|..++..... .....+..|+.+.|.|.+.+.|.| .+.|+++ +..+......
T Consensus 89 ~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~-~~~~~~~~g~~v~L~C~~~g~P~p--~i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 89 LQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQ-RILVVDPVTSEHELTCQAEGYPKA--EVIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp GGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEE-EEEEEETTTTEEEEEEEEEEBSCC--EEEEEETTCCEECCEEEE
T ss_pred cccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCc-eeeeeecCCCcEEEEEEecCCCCC--eEEEEECCCceecCccce
Confidence 9999999999998 566666788888755443211 111245678899999999997665 6679998 5554331100
Q ss_pred cccCCeeeecCCeEE---EecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 230 ELETPNINIDGGLLE---ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 230 ~~~~~~~~~~~~~l~---i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
.........+. ...+...|.|.|+|.|.|..|.....+.+.|...|
T Consensus 165 ----~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 165 ----TNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELP 213 (222)
T ss_dssp ----EECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC-
T ss_pred ----EEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCc
Confidence 00000111111 11334688999999999999999999999887655
No 276
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.75 E-value=2.3e-17 Score=138.66 Aligned_cols=182 Identities=13% Similarity=0.081 Sum_probs=128.3
Q ss_pred CCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEE
Q psy14886 281 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 360 (505)
Q Consensus 281 ~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~ 360 (505)
+|.++.+...+. ...|+|+++.+.++.+ .|.|+|+.. ..|......+ ......+.+ |.++..|.||
T Consensus 4 ~P~nv~~~s~n~-~~iL~W~pp~~~~~~v-~Y~V~y~~~--~~w~~~c~~~---------~~~~c~lt~-l~~~~~Y~~r 69 (201)
T 3lqm_A 4 PPENVRMNSVNF-KNILQWESPAFAKGQL-TFTAQYLSY--RIFQDKCMQT---------TLTECDFSS-LSKYGDHTLR 69 (201)
T ss_dssp CCEEEEEEEETT-EEEEEEECCCCSSSCC-EEEEEEEET--TEEEEEEEEE---------SSSEEECTT-SCSSSCEEEE
T ss_pred CCcccEEEEECC-ceEEEECCCCCCCCCe-EEEEEEEEC--CCcccCcCcc---------CCCEEECCC-CccCCCEEEE
Confidence 467787766555 4679999998766654 599999875 3576433222 223344444 8899999999
Q ss_pred EEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCC---------CCceEEEEEEEcCC
Q psy14886 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA---------PNIYYKIFWRKKND 431 (505)
Q Consensus 361 v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~---------~i~~Y~v~~~~~~~ 431 (505)
|+|.|..|.|.++.. .+.......++|| .+.+. ...++|.|.|.+|.. ..++ .+..|+|.|.+.+.
T Consensus 70 V~A~~~~~~S~~s~~--~f~~~~~t~~~PP-~v~~~-~~~~si~v~w~~P~~-~~~~~~~~~~~~~~~l~Y~v~y~~~~~ 144 (201)
T 3lqm_A 70 VRAEFADEHSDWVQI--TFSPVDDTIIGPP-GMQVE-VLADCLHMRFLAPKI-ENEYETWTMKNVYNSWTYNVQYWKQGT 144 (201)
T ss_dssp EEEEETTEECCCEEE--EECHHHHSBCCCC-EEEEE-EETTEEEEEEECCEE-ECSSCEEEHHHHCTTCEEEEEEEETTC
T ss_pred EEEecCCCcCcceee--eeeecccCeeCCC-EEEEE-EeCCEEEEEEcCCCc-cCCCcccCHHHhCCceEEEEEEEECCC
Confidence 999999988877642 2322222334566 57763 456899999998532 2224 38999999998764
Q ss_pred CCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecC--CCCCCCCceEEEeecce
Q psy14886 432 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND--VGPGPESEVVTIWHDPL 487 (505)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~--~G~g~~s~~~~~~t~p~ 487 (505)
..... +.. ....+.|.+|.|++.|.|+|+|.+. .|.|.+|+...+.|.+.
T Consensus 145 ~~~~~--~~~----~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 145 DEKFQ--ITP----QYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp CCCEE--ECC----SSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred CcEEE--EEe----cCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 43321 111 2346889999999999999999997 68999999999988754
No 277
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.74 E-value=1e-17 Score=123.46 Aligned_cols=96 Identities=18% Similarity=0.286 Sum_probs=77.7
Q ss_pred CCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC---CcEEEEeeecCceeeEEEEcCCccceeeE
Q psy14886 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---EFQSETLKEYGNVGIAVVRIPSEFYYTEY 461 (505)
Q Consensus 385 ~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y 461 (505)
.|..+|.++.+...++++|.|+|++|+....+|.|++|+|.|+..+.. .|....+.. ....+.|.+|.|++.|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~----~~~~~~l~~L~p~t~Y 78 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEG----SKQWHMIGHLQPETSY 78 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEET----TCSEEEECSCCTTCEE
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcC----CceEEECCCCCCCCEE
Confidence 577899999999999999999999976667999999999999998743 676554443 2245789999999999
Q ss_pred EEEEEEecCCCCCCCCceEEEee
Q psy14886 462 EVKVQAINDVGPGPESEVVTIWH 484 (505)
Q Consensus 462 ~~~v~a~n~~G~g~~s~~~~~~t 484 (505)
.|+|+|+|.+|.|++|+.+.+.|
T Consensus 79 ~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 79 DIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EEEEEEEETTEECCCCCCEEEEC
T ss_pred EEEEEEECCCcCCCCCCCEEeec
Confidence 99999999999999999998877
No 278
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.74 E-value=4.1e-18 Score=148.65 Aligned_cols=165 Identities=19% Similarity=0.287 Sum_probs=109.9
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EEC---c--CCCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELL---N--SETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l---~--~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.+.|+|++ ... . ..........|+... +.+|.|.+++ .+|+|.|+|.+.
T Consensus 36 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 114 (237)
T 3sob_L 36 ASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ-PEDFATYYCQQS 114 (237)
T ss_dssp EETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCEEEEEEEC
T ss_pred EeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCC-hhhCeEEEEeec
Confidence 358999999999998888999999942 111 0 000011123566543 3579999999 999999999998
Q ss_pred cccCceEe-eEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCC-C-CCeEEEEECCEEecCCC-cE-EE--ee
Q psy14886 70 NQLKTRYS-SAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-P-KPKFVWKKDGNIIGSGG-RR-KI--FE 140 (505)
Q Consensus 70 ~~~~~~~~-~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p-~~~i~W~~~g~~~~~~~-~~-~~--~~ 140 (505)
+..+.... ...+.|.. .+|.+...+ ....+.+|+.++|.|.+.+. | .+.+.|+++|..+..+. .. .. ..
T Consensus 115 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~--~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~ 192 (237)
T 3sob_L 115 YTTPPTFGQGTKVEIKRTVAAPSVFIFP--PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSK 192 (237)
T ss_dssp SSSSCEECCCEEEEEECCCBCCEEEEEC--CCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTT
T ss_pred cCCceEEcCcEEEEEecCCCCCceEEeC--CChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccC
Confidence 76653322 35566643 233333222 11223468899999999874 4 57999999999876431 00 00 11
Q ss_pred ------CCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 141 ------NGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 141 ------~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
...|.|..+..+|+|.|+|.|.|.....
T Consensus 193 ~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 193 DSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp TCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 1247788888899999999999976543
No 279
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.74 E-value=1.4e-17 Score=143.17 Aligned_cols=175 Identities=15% Similarity=0.167 Sum_probs=120.7
Q ss_pred ceEEeeCCCeEEEEeecCCCCCC---eEEEEECCEEecC------------------CCcEEEe------eCCCEEEcCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGS------------------GGRRKIF------ENGNLLISPV 149 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~---~i~W~~~g~~~~~------------------~~~~~~~------~~~~l~i~~v 149 (505)
..+.+.+|++++|.|.+.+.|.+ .|.|+|++..+.. ..+.... .+.+|.|.++
T Consensus 7 ~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v 86 (218)
T 4frw_A 7 DVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA 86 (218)
T ss_dssp SEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSC
T ss_pred CeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeec
Confidence 45778999999999999888765 4899997643321 0111111 1246999999
Q ss_pred CCCCCEEEEEEEEcCCCceeee-EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCC
Q psy14886 150 SRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 228 (505)
Q Consensus 150 ~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~ 228 (505)
+.+|+|.|.|.+.+..+..... ..+.+...+...........+..+..+.+.|.+.+.|.| .+.|++++..+.....
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p--~i~W~~~~~~~~~~~~ 164 (218)
T 4frw_A 87 VQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP--SVTWDTEVKGTTSSRS 164 (218)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC--EEEEEESSCCEEEEEE
T ss_pred cHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCc--eEEEEECCcccccCce
Confidence 9999999999998876655444 444444444444444445566678889999999998876 5669998766543211
Q ss_pred CcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 229 ~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
... .......+.|.|..+..+|.|.|+|.|.|..|..+..+.+.+
T Consensus 165 ~~~--~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 165 FKH--SRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp EEC--SSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred Eec--CCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 000 111112347899999999999999999999998766665554
No 280
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.74 E-value=3.2e-17 Score=147.72 Aligned_cols=211 Identities=16% Similarity=0.123 Sum_probs=138.2
Q ss_pred CCCCCEEEEEEEEecCCcEEEEEEEEE----cCCCCCCCceEEEEEeCCeEEEEeecCCCC------CCCCceEEEEEEe
Q psy14886 249 SFADAGEYECVVKSTVGKISTKTTVIV----EGPPGLPGGVQVVEVHKTSATIQWTDGATN------GRPITHYKIIART 318 (505)
Q Consensus 249 ~~~~~g~y~C~~~n~~g~~~~~~~l~v----~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~------~~~i~~y~v~~~~ 318 (505)
.....+.++..|.| .|....+....+ ..+++||. +.+.. ...++.|+|.|+... .+.+..|.|.|+.
T Consensus 69 ~~~~~Y~~rV~A~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~-~~~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~ 145 (306)
T 3s98_A 69 NVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEA-EDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWK 145 (306)
T ss_dssp CTTSCEEEEEEEEC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEE-CSSCEEEEEECC---CCCC-----CCEEEEEEEE
T ss_pred CCCCcEEEEEEEEe-CCcCCCEeeeeEechhhCccCCCe-EEEEE-cCCEEEEEEECCCCCCcceeccCCcEEEEEEEEE
Confidence 45566777888888 664433222212 13456665 66554 446899999966542 3578999999987
Q ss_pred CCCCC-eEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEc--CCCcCCCCCCCCCccCCCCCCCCCCceeee
Q psy14886 319 NWNST-WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN--ELGYGEPSSPSPQYNTPADKPYQAPSRIGG 395 (505)
Q Consensus 319 ~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n--~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~ 395 (505)
.+... |... . ....+.+.+ |.+++.|.|+|+|.| ..|.|++|... .+.|..+.|+.+|.++.+
T Consensus 146 ~~~~~~~~~~-~-----------~~~~~~l~~-L~p~t~Y~~~V~A~~~~~~g~g~~S~~~-~~~T~~~~p~~~P~~v~~ 211 (306)
T 3s98_A 146 NSSGVEERIE-N-----------IYSRHKIYK-LSPETTYCLKVKAALLTSWKIGVYSPVH-CIKTTVENELPPPENIEV 211 (306)
T ss_dssp TTTCCCEEEE-E-----------ECTEEEECS-CCTTCEEEEEEEEEEGGGTEECCCCCCE-EEECCSCCSSCCCEEEEE
T ss_pred CCCCCeEEEe-c-----------ccceEEEcc-CCCCCeEEEEEEEEEccCCCCCCCCCcE-eeEecCCCcCCCCceEEE
Confidence 76543 4321 1 112444555 999999999999999 67899888875 677778888889999998
Q ss_pred eccccccEEEEEEeCCccccCCCCceEEEEEEE--------cCCCCcEEEEeeecCceeeEEEEcCC-ccceeeEEEEEE
Q psy14886 396 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--------KNDTEFQSETLKEYGNVGIAVVRIPS-EFYYTEYEVKVQ 466 (505)
Q Consensus 396 ~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p~~~Y~~~v~ 466 (505)
... .+++.|.|+++ .. -.+|.++|.. .+..+|......... ..+.+.+.+ |.+...|.|||+
T Consensus 212 ~~~-~~s~~l~W~~p--~~----~~~~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~--~~~~c~~~~~~~~~~~Y~~RV~ 282 (306)
T 3s98_A 212 SVQ-NQNYVLKWDYT--YA----NMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENV--KTTQCVFPQNVFQKGIYLLRVQ 282 (306)
T ss_dssp EEE-TTEEEEEEECS--SS----SCEEEEEEEEGGGGSCC----CCCEECGGGTTB--SSSEEEEEGGGSCSSEEEEEEE
T ss_pred EEe-cCEEEEEeCCC--CC----cEEEEEEEehhhhhccccccccCceECCCceeC--CCccccCchhhcccCCEEEEEE
Confidence 654 47899999983 21 2356666653 346678743222222 223444555 334459999999
Q ss_pred EecCCCCCCCCceEEEeec
Q psy14886 467 AINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 467 a~n~~G~g~~s~~~~~~t~ 485 (505)
|.|..|.|.+|+...+.|.
T Consensus 283 A~n~~~~s~~s~~~~~~~~ 301 (306)
T 3s98_A 283 ASDGNNTSFWSEEIKFDTE 301 (306)
T ss_dssp EECSSCBCCCCCCEEEEC-
T ss_pred EccCCCccccccccccCcc
Confidence 9999999999999998775
No 281
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.74 E-value=1.2e-16 Score=138.14 Aligned_cols=172 Identities=16% Similarity=0.192 Sum_probs=110.6
Q ss_pred ceEEeeCCCeEEEEeecCCCCCC---eEEEEECCEE-----------ecC------CCcEEEee------CCCEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNI-----------IGS------GGRRKIFE------NGNLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~---~i~W~~~g~~-----------~~~------~~~~~~~~------~~~l~i~~v~ 150 (505)
..+.+.+|++++|.|.+.+.+.+ .|.|+|++.. +.. ..+..... +.+|.|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 34678999999999998765443 7999986532 110 11222221 1259999999
Q ss_pred CCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeec-CCCCeEEEEEeCCEEecCCCCC
Q psy14886 151 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLN 229 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~~w~~~~~~~~~~~~~ 229 (505)
.+|+|.|+|.|.|..|.....+.+.+...+.. ......+..|..+.|.|.+.+. |.| .+.|++++..+.....
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~---~~~~~~~~~g~~v~l~c~~~g~~P~p--~i~W~k~~~~~~~~~~- 165 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAALGSD---LHVDVKGYKDGGIHLECRSTGWYPQP--QIQWSNNKGENIPTVE- 165 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCCC---CEEEEEEEETTEEEEEEEEEEEBSCC--EEEEECTTSCBCCCEE-
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeeccceec---ccceeeeccCCceeeEEEeccCCCCC--EEEEEECCceEcCCCc-
Confidence 99999999999998777665555554332221 1234567789999999999985 554 6679986543322110
Q ss_pred cccCCeeeecCCe---EEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 230 ELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 230 ~~~~~~~~~~~~~---l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
.......++. +.+..+..+|.|.|+|.|.|..|..+..+.|.|..
T Consensus 166 ---~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 166 ---APVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp ---CCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred ---eEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 0111112222 23345677899999999999999999888888865
No 282
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.74 E-value=1.2e-17 Score=126.64 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=89.8
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceee
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 447 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 447 (505)
|.|++|... .+.|.++.|..+|.++.+.. +.++|.|+|++|+....+|.|++|+|.|+..+...+... .. ..
T Consensus 1 G~G~~S~~v-~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~--~~----~~ 72 (117)
T 1wj3_A 1 GSSGSSGTV-NVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVL--NT----NK 72 (117)
T ss_dssp CCCCCCCCC-CCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEE--EE----SS
T ss_pred CcCCCCCCE-EEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEE--eC----CC
Confidence 567777664 78888999998999999876 788999999997778899999999999999875555221 11 11
Q ss_pred EEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 448 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 448 ~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
+.+.+. |.+++.|.|+|+|+|.+|.|++|+.+.++|..
T Consensus 73 ~~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 73 TSAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp SEEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred cEEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 345556 89999999999999999999999999998864
No 283
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.74 E-value=8.9e-17 Score=133.71 Aligned_cols=163 Identities=11% Similarity=0.127 Sum_probs=116.6
Q ss_pred ceEEeeCCCeEEEEeecCCCCCC--eEEEEECCEEecCCCcEE-EeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRK-IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 173 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~--~i~W~~~g~~~~~~~~~~-~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~ 173 (505)
..+.+.+|++++|.|.+ +.|.+ .|.|++.+..+ .+.. ......|.|.+++.+|.|.|.|.|.+..+.....+.
T Consensus 15 ~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 15 PVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp SEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 44678999999999999 88877 99999855433 2222 222346999999999999999999999888778899
Q ss_pred EEEEeCCeeeeeCCCceEEEeeccEEEEEEeeec-CCC--CeEEEEEeCCEEecCCCCCc--c---------cCCeeeec
Q psy14886 174 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELL--DVAYIWTHNGVRIGNMDLNE--L---------ETPNINID 239 (505)
Q Consensus 174 l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~--~~~~~w~~~~~~~~~~~~~~--~---------~~~~~~~~ 239 (505)
|.|..+|..+...+. ....|+.+ |.|.+.+. |.+ .+++.|++++..+....... . ........
T Consensus 91 ltV~~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~v 167 (210)
T 1gsm_A 91 LLVYAFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRV 167 (210)
T ss_dssp EEEEBCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEE
T ss_pred EEEEecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEE
Confidence 999988876654432 45567778 99999986 544 57899999999985432100 0 00111111
Q ss_pred CCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 240 GGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 240 ~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.+.+.+.....++.+.|+|.|.+.+-.
T Consensus 168 ts~~~~~~~~~D~~~~~tC~a~~~L~~ 194 (210)
T 1gsm_A 168 TERWRLPPLGTPVPPALYCQATMRLPG 194 (210)
T ss_dssp EEEEECCCCCSSCCSEEEEEEEEEETT
T ss_pred EEEEeecCCcccCCceEEEEEEeeCCC
Confidence 233444466667779999999876543
No 284
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.74 E-value=4e-17 Score=143.86 Aligned_cols=173 Identities=17% Similarity=0.213 Sum_probs=113.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EECc------CCCCCCCCCCcEEEE------CCeEEEEcCCCCCCCeEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELLN------SETLPLEDQDRYFIQ------DNVLTIRYLNPERDPAMYQC 66 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l~------~~~~~~~~~~~~~~~------~~~L~i~~~~~~~d~G~Y~C 66 (505)
|.+|++++|.|.+.+.|.+.+.|+|.. ..+. .........+|+.+. ..+|.|.+++ .+|+|.|+|
T Consensus 15 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~-~~DsG~Y~C 93 (256)
T 3tf7_C 15 VSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH-RSDSAVYFC 93 (256)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC-GGGCSEEEE
T ss_pred ecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC-cccCEEEEE
Confidence 468999999999998889999999932 1110 000000123455441 2479999999 999999999
Q ss_pred EEEcccCc----eEeeEEEEEEe-------------------cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEE
Q psy14886 67 RAKNQLKT----RYSSAQLRVLT-------------------LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVW 123 (505)
Q Consensus 67 ~~~~~~~~----~~~~~~l~v~~-------------------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W 123 (505)
.+.+..+. ....+.|.|.. .+|.+... +....+.+|++++|.|.+.+. .+.+.|
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~-~~~v~W 170 (256)
T 3tf7_C 94 AVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQS--PRNKVTVTGENVTLSCRQTNS-HNYMYW 170 (256)
T ss_dssp EEECTTCTTCEEECCCEEEEEEC---------------------CCEEES--CSEEEEETTCCEEECEEECSC-CSEEEE
T ss_pred EEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEec--CCEEEEeCCCcEEEEEEcCCC-ceEEEE
Confidence 99986542 12235677764 12333333 355678899999999999877 679999
Q ss_pred EECC--EE---ec------------CCCcEEEee----CCCEEEcCCCCCCCEEEEEEEEcCCCceeee--EEEEEE
Q psy14886 124 KKDG--NI---IG------------SGGRRKIFE----NGNLLISPVSRDDSGIYSCTATNVHGMDESK--GRLIVL 177 (505)
Q Consensus 124 ~~~g--~~---~~------------~~~~~~~~~----~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~--~~l~v~ 177 (505)
++.. .. +. ...++.... ..+|.|.+++.+|+|.|+|.|.|..|..... ..|.|.
T Consensus 171 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~ 247 (256)
T 3tf7_C 171 YRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSKLTVL 247 (256)
T ss_dssp EEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeEEEEE
Confidence 9832 11 10 012222221 2359999999999999999999876654332 445554
No 285
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.74 E-value=3.5e-18 Score=150.75 Aligned_cols=165 Identities=18% Similarity=0.284 Sum_probs=109.7
Q ss_pred CCCCCceEEEEEEeccC-----CCeEEEEECC--EECc---CC--CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEE
Q psy14886 1 MDNQADLTWTCEAFGVP-----DVTYSWFRNG--ELLN---SE--TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMY 64 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-----~~~~~W~~~~--~~l~---~~--~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y 64 (505)
+.+|++++|.|.+.+.| .+.+.|+|++ ..+. .. ........|+... ..+|.|.+++ .+|+|.|
T Consensus 50 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y 128 (254)
T 2c1o_A 50 VTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVE-AEDLGIY 128 (254)
T ss_dssp ECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCSEE
T ss_pred ecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCC-cccCEEE
Confidence 46899999999998876 4899999843 2221 00 0001123566552 2389999999 9999999
Q ss_pred EEEEEcccCceEe-eEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCCCcEE--
Q psy14886 65 QCRAKNQLKTRYS-SAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGGRRK-- 137 (505)
Q Consensus 65 ~C~~~~~~~~~~~-~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~~-- 137 (505)
+|.+.|..+.... ...+.|.. .+|.+...+.. ....+|+.++|.|.+.+. |. +.+.|+++|..+.......
T Consensus 129 ~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 206 (254)
T 2c1o_A 129 YCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWT 206 (254)
T ss_dssp EEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEEC
T ss_pred EEEEEcCcceEecCCEEEEECCCCCCCeeEeecCC--hhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccc
Confidence 9999987654332 34566643 23444332211 113357899999999874 44 4799999998876541110
Q ss_pred E--------eeCCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 138 I--------FENGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 138 ~--------~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
. .....|.|.++..+|+|.|+|.|.|.....
T Consensus 207 ~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 207 DQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 0 112358999999999999999999976543
No 286
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.74 E-value=3.4e-18 Score=147.79 Aligned_cols=170 Identities=16% Similarity=0.210 Sum_probs=110.2
Q ss_pred CCCCceEEEEEEeccCCC---eEEEEECCEECcCC---------CCCCCCCCcEEE-----------ECCeEEEEcCCCC
Q psy14886 2 DNQADLTWTCEAFGVPDV---TYSWFRNGELLNSE---------TLPLEDQDRYFI-----------QDNVLTIRYLNPE 58 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p~~---~~~W~~~~~~l~~~---------~~~~~~~~~~~~-----------~~~~L~i~~~~~~ 58 (505)
.+|++++|.|.+.+.+.+ .|.|+|++..+... ........+... .+++|.|.+++ .
T Consensus 14 ~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~-~ 92 (225)
T 4fmk_A 14 RLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLR-V 92 (225)
T ss_dssp ETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCC-G
T ss_pred ecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCC-H
Confidence 479999999999876654 48999976433110 000011122221 24679999999 9
Q ss_pred CCCeEEEEEEEcccCceEee-EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEecCCCcE
Q psy14886 59 RDPAMYQCRAKNQLKTRYSS-AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRR 136 (505)
Q Consensus 59 ~d~G~Y~C~~~~~~~~~~~~-~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~~~~~~ 136 (505)
+|+|.|+|.+.+..+..... ..+.+. .+|.....+ .......++.+.+.|.+ .+.|.+.+.|++++..+......
T Consensus 93 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~ 169 (225)
T 4fmk_A 93 EDEGNYTCEFATFPNGTRRGVTWLRVI-AQPENHAEA--QEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQE 169 (225)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEE-BCCEEEEEE--CCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEE
T ss_pred HHCcceEEEEEeCCCcceeeeeeeeee-cCCceeecc--cceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcce
Confidence 99999999999876655444 334444 344433322 22335567777777765 55678899999987654332222
Q ss_pred EEeeCC------CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 137 KIFENG------NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 137 ~~~~~~------~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
....++ .|.|.++..+|+|.|+|.|.|..+.......+.
T Consensus 170 ~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 170 PGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVT 214 (225)
T ss_dssp ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred EEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEE
Confidence 222222 499999999999999999999887765544333
No 287
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=8.4e-18 Score=140.63 Aligned_cols=152 Identities=14% Similarity=0.200 Sum_probs=107.9
Q ss_pred EeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC--CcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce--eeeEEEE
Q psy14886 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD--ESKGRLI 175 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~--~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~--~~~~~l~ 175 (505)
.+.+|++++|.|.+.+. .+.+.|+|+|..+... .......++.|.|.+++.+|+|.|+|.+.+..+.. ...+.|.
T Consensus 14 ~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~ 92 (188)
T 1oll_A 14 MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 92 (188)
T ss_dssp EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEE
Confidence 58899999999998764 4689999999876421 00011123469999999999999999998865432 3446777
Q ss_pred EEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCC
Q psy14886 176 VLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 252 (505)
Q Consensus 176 v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 252 (505)
|.. +|.+. ..+ ...+..|+.++|.|.+.+. . ..+.|+++|..+... .........|.|..+..+|
T Consensus 93 V~~~~~~p~i~-~~p-~~~v~~G~~v~L~C~~~~~-~--~~~~w~k~g~~~~~~-------~~~~~~~~~L~I~~v~~~d 160 (188)
T 1oll_A 93 VTEMYDTPTLS-VHP-GPEVISGEKVTFYCRLDTA-T--SMFLLLKEGRSSHVQ-------RGYGKVQAEFPLGPVTTAH 160 (188)
T ss_dssp EESCSCCCEEE-EES-CSEEETTCEEEEEEECSSS-C--SEEEEEEESSSCEEE-------EEECSSEEEEEEEECCGGG
T ss_pred ecccCCCCeEE-ECC-CCccccCCEEEEEEEcCCC-C--CEEEEEECCcccccc-------ccCCCceeEEEECCCCcCC
Confidence 764 33333 222 4567899999999998653 2 367899987554320 1112234689999999999
Q ss_pred CEEEEEEEEecC
Q psy14886 253 AGEYECVVKSTV 264 (505)
Q Consensus 253 ~g~y~C~~~n~~ 264 (505)
.|.|+|.|.|..
T Consensus 161 ~G~Y~C~a~n~~ 172 (188)
T 1oll_A 161 RGTYRCFGSYNN 172 (188)
T ss_dssp CEEEEEECEEET
T ss_pred CcEEEEEEEcCC
Confidence 999999998864
No 288
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.74 E-value=6.5e-18 Score=144.70 Aligned_cols=164 Identities=18% Similarity=0.277 Sum_probs=109.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC---EE--CcC--CCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG---EL--LNS--ETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~---~~--l~~--~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.+.|+|.+ .+ +.. .........|+... ..+|.|.+++ .+|+|.|+|.+.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 91 (213)
T 3r06_A 13 ASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLE-SEDIGSYYCQQY 91 (213)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCSEEEEEEC
T ss_pred ecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCC-cccCEEEEEecc
Confidence 468999999999998888999999932 11 000 00001124566543 2389999999 999999999998
Q ss_pred cccCceEe-eEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCCCC--CeEEEEECCEEecCCC-c-EEEe--e
Q psy14886 70 NQLKTRYS-SAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVWKKDGNIIGSGG-R-RKIF--E 140 (505)
Q Consensus 70 ~~~~~~~~-~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~--~~i~W~~~g~~~~~~~-~-~~~~--~ 140 (505)
+..+.... ...|.|.. .+|.+...+ ....+..|+.++|.|.+.+.++ +.+.|+++|..+..+. . .... .
T Consensus 92 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~--~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 169 (213)
T 3r06_A 92 YNYPWTFGPGTKLEIKRADAKPTVSIFP--PSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSK 169 (213)
T ss_dssp SSSSCEECCCEEEEECCCCBCCEEEEEC--CCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTT
T ss_pred cCCceEEcCCceEEEeccCCCceeeeeC--CCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCC
Confidence 86543333 45566632 244443332 1223457889999999987643 4999999999886531 1 1111 1
Q ss_pred CC------CEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 141 NG------NLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 141 ~~------~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
++ .|.|.....+|+|.|+|.|.|....
T Consensus 170 ~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 170 DSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp TCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred CCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 22 3777777788999999999987543
No 289
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.74 E-value=5.4e-18 Score=145.47 Aligned_cols=165 Identities=18% Similarity=0.261 Sum_probs=107.9
Q ss_pred CCCCCceEEEEEEe-ccC-CCeEEEEECC--EECc---CC--CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEE
Q psy14886 1 MDNQADLTWTCEAF-GVP-DVTYSWFRNG--ELLN---SE--TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCR 67 (505)
Q Consensus 1 v~~G~~~~l~C~~~-~~p-~~~~~W~~~~--~~l~---~~--~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~ 67 (505)
+.+|++++|.|.+. +.+ .+.|.|+|++ ..+. .. ........|+... ..+|.|.+++ .+|+|.|+|.
T Consensus 12 v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~ 90 (216)
T 2xzc_L 12 AAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQ-TGDEADYYCG 90 (216)
T ss_dssp ECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCC-GGGCEEEEEE
T ss_pred ecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCC-cccCEEEEEE
Confidence 46899999999964 332 5789999953 2211 00 0001123466553 2389999999 9999999999
Q ss_pred EEcccC-c-eEeeEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEecCCCcEE--Ee
Q psy14886 68 AKNQLK-T-RYSSAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSGGRRK--IF 139 (505)
Q Consensus 68 ~~~~~~-~-~~~~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~~~~~~~--~~ 139 (505)
+.+..+ . ......|.|.. .+|.+...+... ...+|+.++|.|.+.+ .|.+ .+.|+++|..+....... ..
T Consensus 91 ~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~--~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~ 168 (216)
T 2xzc_L 91 TWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSD--EQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ 168 (216)
T ss_dssp EECTTSCEEEBCCEEEEECCCCBCCEEEEECCCH--HHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCC
T ss_pred EEeCCCcceECCCEEEEEcCCCCCCceEEeCCCh--hhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcc
Confidence 998765 1 22245566643 234433322111 1236889999999988 4554 999999999876541111 11
Q ss_pred --eCC------CEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 140 --ENG------NLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 140 --~~~------~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
.++ .|.|..+..+|+|.|+|.|.|.....
T Consensus 169 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 169 DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp CTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred cCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 112 48889999999999999999876543
No 290
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.74 E-value=2e-18 Score=148.60 Aligned_cols=167 Identities=17% Similarity=0.252 Sum_probs=108.5
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEEC--CEECcC-------CC---CCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRN--GELLNS-------ET---LPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~--~~~l~~-------~~---~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ .+.+.|+|+ +..+.. .. ......+|+.+. ..+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 90 (219)
T 1c1e_H 12 KKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLK-NED 90 (219)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCC-GGG
T ss_pred ecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCC-ccc
Confidence 46899999999998765 689999996 332210 00 000123566653 2589999999 999
Q ss_pred CeEEEEEEEcccCce----EeeEEEEEEecC---CCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEec
Q psy14886 61 PAMYQCRAKNQLKTR----YSSAQLRVLTLK---PSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIG 131 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~----~~~~~l~v~~~~---p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~ 131 (505)
+|.|+|.+.+..+.. ...+.|.|...+ |.+...+ +...+.+|+.+.|.|.+.+ .|.+ .|.|+++|..+.
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~ 168 (219)
T 1c1e_H 91 MATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 168 (219)
T ss_dssp CEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEEC--CCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEec--CccccccCCeEEEEEEcccccCCCeEEEEEeCCcccc
Confidence 999999999875321 124667776421 3332221 1113568999999999998 7888 999999987642
Q ss_pred C--CCcEE----EeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeee
Q psy14886 132 S--GGRRK----IFENGNLLISPVSRDDSGIYSCTATNVHGMDESK 171 (505)
Q Consensus 132 ~--~~~~~----~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~ 171 (505)
. ..... ......|.|... ..|.|.|+|.|.|..+.....
T Consensus 169 ~~~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~ 213 (219)
T 1c1e_H 169 VHTFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNVAHPASSTKVD 213 (219)
T ss_dssp EEECCCEESSSCEEEEEEEEEESS-STTTSCCEEEEEEGGGTEEEE
T ss_pred eEecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEEEeCCCCccEE
Confidence 1 11100 011124788444 446699999999987765443
No 291
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.74 E-value=3.5e-19 Score=152.49 Aligned_cols=167 Identities=20% Similarity=0.264 Sum_probs=111.9
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEECc---CC--CCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GELLN---SE--TLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~---~~--~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.+.|+|+ +..+. .. ........|+.+. + .+|.|.+++ .+|+|.|+|.+.
T Consensus 11 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 89 (212)
T 1nfd_E 11 VTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQ-PEDEAAYYCLSS 89 (212)
T ss_dssp EETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCC-GGGCSEEEEEEE
T ss_pred EeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCC-cccCEEEEEEEE
Confidence 46899999999998777778999995 22221 00 0000123566543 2 389999999 999999999999
Q ss_pred cccC-ce--EeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCCCcEE----
Q psy14886 70 NQLK-TR--YSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGGRRK---- 137 (505)
Q Consensus 70 ~~~~-~~--~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~~---- 137 (505)
|..+ .. .....+.|.. .+|.+...+. ...+.+|+.++|.|.+.+. |. +.+.|+++|..+.......
T Consensus 90 n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~--~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 167 (212)
T 1nfd_E 90 YGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPP--SPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSK 167 (212)
T ss_dssp ETTTTEEEECCCEEEEEECCCCBCCEEECCCC--CHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBC
T ss_pred cccCcccccCCceEEEEccCCCCCCEEEeeCC--chHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCcee
Confidence 6322 11 2235566642 2444444331 1224579999999999886 54 7999999999886432210
Q ss_pred ----EeeCCCEEEcCCCCCCCEEEEEEEEcCCCceee
Q psy14886 138 ----IFENGNLLISPVSRDDSGIYSCTATNVHGMDES 170 (505)
Q Consensus 138 ----~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~ 170 (505)
....+.|.|.++..+|+|.|+|.|.|..+....
T Consensus 168 ~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 168 QGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp SSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred cCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 111245889999999999999999998765443
No 292
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.74 E-value=2.5e-18 Score=147.07 Aligned_cols=166 Identities=21% Similarity=0.278 Sum_probs=112.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEECc---C--CCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GELLN---S--ETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~---~--~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+. |.+.+.|+|+ +..+. . .........|+... ..+|.|.+++ .+|+|.|+|.+.
T Consensus 12 v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 88 (211)
T 3tv3_L 12 GSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQ-TDDEAVYYCGSL 88 (211)
T ss_dssp ECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCC-GGGCEEEEEEEE
T ss_pred EcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCC-hhHCEEEEEEEe
Confidence 46899999999998 8899999994 22211 0 00001123455532 2479999999 999999999999
Q ss_pred cccC--ceEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC--CCCeEEEEECCEEecCCCc---EEEe
Q psy14886 70 NQLK--TRYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGR---RKIF 139 (505)
Q Consensus 70 ~~~~--~~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~--p~~~i~W~~~g~~~~~~~~---~~~~ 139 (505)
+..+ .....+.|.|.. .+|.+...+.. ..+.+|+.++|.|.+.+. |.+.+.|+++|..+..+.. ....
T Consensus 89 ~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 166 (211)
T 3tv3_L 89 VGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPS--SEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQ 166 (211)
T ss_dssp ETTTEEEECCCEEEEECCSCCBCCEEEEECCC--HHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred cCCCceeECCCceEEEeCCCCcCCeeEecCCc--hhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceEC
Confidence 8776 233356777763 24444433311 223479999999999885 3579999999998854211 1111
Q ss_pred eC------CCEEEcCCCCCCCEEEEEEEEcCCCceeee
Q psy14886 140 EN------GNLLISPVSRDDSGIYSCTATNVHGMDESK 171 (505)
Q Consensus 140 ~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~ 171 (505)
.+ ..|.|.++..+|.|.|+|.|.|..+.....
T Consensus 167 ~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~ 204 (211)
T 3tv3_L 167 SNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 204 (211)
T ss_dssp TTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEee
Confidence 11 248888888889999999999987655443
No 293
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.74 E-value=8.1e-18 Score=173.73 Aligned_cols=145 Identities=15% Similarity=0.233 Sum_probs=105.9
Q ss_pred CCCceEEEEEeCCeEEEEeecCCC-CCCCCceEEEEEEeCC--------------CCCeEEeeeccccceee-eecCcee
Q psy14886 281 LPGGVQVVEVHKTSATIQWTDGAT-NGRPITHYKIIARTNW--------------NSTWFNVSEHVIGKEVD-RYTGRKE 344 (505)
Q Consensus 281 ~p~~~~~~~~~~~~v~l~w~~~~~-~~~~i~~y~v~~~~~~--------------~~~w~~~~~~~~~~~~~-~~~~~~~ 344 (505)
.|.++.+..++.+++.|+|+++.. ++.++.+|.|+|+... ...|............. .......
T Consensus 471 ~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~ 550 (897)
T 2dtg_E 471 ELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPG 550 (897)
T ss_dssp CBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCE
T ss_pred ceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccc
Confidence 345678889999999999999874 4568999999988652 34565533221100000 0001233
Q ss_pred eEEeeeccCCceeEEEEEE-EcCCCc----CCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCC
Q psy14886 345 ASIENVLVPWSTYEFKVIA-GNELGY----GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 419 (505)
Q Consensus 345 ~~~~~~L~~~~~y~~~v~a-~n~~G~----~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i 419 (505)
+.+.+ |.|++.|.|+|+| .|..|. +.+|... .++|.+..| .+|.++.+...+.++|.|.|+| +.+.+|.|
T Consensus 551 ~~l~~-L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v-~~~T~~~~P-s~P~~l~~~~~s~tsI~LsW~p--P~~~nG~I 625 (897)
T 2dtg_E 551 WLMRG-LKPWTQYAIFVKTLVTFSDERRTYGAKSDII-YVQTDATNP-SVPLDPISVSNSSSQIILKWKP--PSDPNGNI 625 (897)
T ss_dssp EEECS-CCSSCBCCBEEEECCCCCSSCCCCCCBCCCB-CCBCCCCCC-CCCEEEEEEECSSSCEEEEEEC--CCCSSSSC
T ss_pred eEeCC-CCCCcEEEEEEEEEEeccCCccccCCccceE-EEECCCCCC-cCCcceEEEeCCCCEEEEEEeC--CCCCCCCe
Confidence 44444 9999999999999 999998 5666653 667766666 5999999999999999999998 47788899
Q ss_pred ceEEEEEEEcC
Q psy14886 420 IYYKIFWRKKN 430 (505)
Q Consensus 420 ~~Y~v~~~~~~ 430 (505)
++|+|+|+..+
T Consensus 626 ~~Y~V~~~~~~ 636 (897)
T 2dtg_E 626 THYLVFWERQA 636 (897)
T ss_dssp SEEECCEEEEC
T ss_pred eEEEEEEEECC
Confidence 99999998754
No 294
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.73 E-value=2.1e-17 Score=142.49 Aligned_cols=193 Identities=16% Similarity=0.169 Sum_probs=127.1
Q ss_pred cCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCC-ceEEEEEEeCCCC----CeEEeeeccccceeeeecCceeeEEeee
Q psy14886 276 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI-THYKIIARTNWNS----TWFNVSEHVIGKEVDRYTGRKEASIENV 350 (505)
Q Consensus 276 ~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i-~~y~v~~~~~~~~----~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (505)
..+|..|.++.+......+++++|+++.+++.+. ..|.+.|+..... .|..+...... ......+...+
T Consensus 27 ~~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~------~~~~C~~~~~~ 100 (236)
T 1axi_B 27 TNSSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSA------GENSCYFNSSF 100 (236)
T ss_dssp -----CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTT------CTTEEEECGGG
T ss_pred CCCCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCC------CCEEEEECCcC
Confidence 3578899999888788899999999866555442 5788888765432 35554322210 01122222334
Q ss_pred ccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceee--eecccc----ccEEEEEEeCCcc-ccCC-CCceE
Q psy14886 351 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG--GGGGKI----GDLSISWEPLPRE-KQNA-PNIYY 422 (505)
Q Consensus 351 L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~--~~~~~~----~~v~l~W~~~~~~-~~~~-~i~~Y 422 (505)
|.+++.|.|+|.| | .+.+. . ..+.......+.||.++. +...+. ..+.|+|++|... ..+| .++.|
T Consensus 101 l~~~~~Y~~~V~a-N-~~~s~---~-~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Y 174 (236)
T 1axi_B 101 TSIAIPYCIKLTS-N-GGTVD---E-KCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEY 174 (236)
T ss_dssp CCSSSEEEEEEEE-T-TEEEE---E-EEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEE
T ss_pred CcccceEEEEEEE-C-CccCC---C-eEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEE
Confidence 8889999999999 9 33332 2 134444556678999995 443322 4599999996443 2356 68999
Q ss_pred EEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCC--CCCCCceEEEeec
Q psy14886 423 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG--PGPESEVVTIWHD 485 (505)
Q Consensus 423 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G--~g~~s~~~~~~t~ 485 (505)
.|+|+..+...|...... ..+.+.|.+|.|++.|.|+|+|.+..| .|++|+.+.+.|+
T Consensus 175 evry~~~~~~~w~~~~~~-----~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 175 ELQYKEVNETKWKMMDPI-----LTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEEEETTCSSCEECCCB-----SSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred EEEEEECCCCceEEEecc-----CCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 999999987788754321 235778889999999999999999999 8999998887664
No 295
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.73 E-value=3.4e-15 Score=124.59 Aligned_cols=236 Identities=14% Similarity=0.279 Sum_probs=150.5
Q ss_pred CCCCCceEEEEEEec-cC---CCeEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFG-VP---DVTYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~-~p---~~~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
+..|+.++|.|.+.+ .| +..++|+|||.++.. ..+.|.+..+. ..|+|.|+|.+.+..+...
T Consensus 14 i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG-------------aT~tLti~s~t-~sdSG~YqCvVTDa~Gcs~ 79 (304)
T 3shs_A 14 FLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN-------------NTATLTVADAT-SENAGSYKVTVQDTDTMTS 79 (304)
T ss_dssp BCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC-------------CSSEEEESSCC-GGGCEEEEEEEEETTTCCE
T ss_pred ccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC-------------CcceEEeeecc-ccCCeEEEEEEEECCCCee
Confidence 357999999999965 56 568999999998762 24588899999 9999999999998887765
Q ss_pred eeEEEEEEecCC-CccCCCCCceEEeeCCCeEEEEeec--CC-CC-----CCeEEEEECCEEecCCCcEEEeeCCCEEEc
Q psy14886 77 SSAQLRVLTLKP-SFKKRPLESETYAGEGGNVTIFCNP--EA-AP-----KPKFVWKKDGNIIGSGGRRKIFENGNLLIS 147 (505)
Q Consensus 77 ~~~~l~v~~~~p-~~~~~~~~~~~~v~~g~~v~l~C~~--~~-~p-----~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~ 147 (505)
.+..+.|..... .+.... +....+..|..+.|.+.+ .| .+ ..++.|++++..+.. ...|.+.
T Consensus 80 tSs~VtVT~~a~l~i~it~-P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg--------Aq~lT~s 150 (304)
T 3shs_A 80 VESEVFLMEEAELIVNITE-PQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT--------TQDITIQ 150 (304)
T ss_dssp EECCCEEECBCCEEEEESS-CSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES--------SSEEEEC
T ss_pred eeeeEEEeccCceeEEecC-CCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC--------cccccee
Confidence 554445543222 222222 344556678899999886 44 33 459999999987643 2246777
Q ss_pred CCCCCCCEEEEEEEEcCCCceeee--EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeee--------cCCCCeEEEEE
Q psy14886 148 PVSRDDSGIYSCTATNVHGMDESK--GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT--------EELLDVAYIWT 217 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~~g~~~~~--~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~--------~~~~~~~~~w~ 217 (505)
.....+.|.|+|.+.+..+....+ +.+.+...+ +....-....+..|+.+.|...+.. .|...+.+.|+
T Consensus 151 S~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (304)
T 3shs_A 151 EFTADKNGVYTVKVWGESEDSAASASTKIMLATMN-VDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWY 229 (304)
T ss_dssp SCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEE-EEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEEE
T ss_pred eEEecCCeEEEEEEEcCCCCcccccceEEEEEccc-cchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEEE
Confidence 788889999999999987644333 333332211 1112234556778888888665532 23334567787
Q ss_pred eCC-EEecCC----CCC-cccCCeeeecCCeEEEecCCCCCCEEEEEEEE
Q psy14886 218 HNG-VRIGNM----DLN-ELETPNINIDGGLLEITNASFADAGEYECVVK 261 (505)
Q Consensus 218 ~~~-~~~~~~----~~~-~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 261 (505)
... ..+.+. ... ..+... ...++.|.-.....+|...|.|.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 230 LQREGQLSPTLIGSEVGEALEGFS-ITPDGHLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp EECTTCCSCEEEESSSEECGGGEE-ECTTSCEEESSCCGGGCEEEEEEEE
T ss_pred EeecCccCchhhhhhhhhhhccce-eCCCcceeecccccccchheeeHHH
Confidence 521 111110 000 000011 1124566666777888999999984
No 296
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.73 E-value=3.5e-18 Score=148.74 Aligned_cols=167 Identities=21% Similarity=0.262 Sum_probs=109.5
Q ss_pred CCCCCceEEEEEEeccC-CC-eEEEEECC--EEC---cCC--CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVP-DV-TYSWFRNG--ELL---NSE--TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCR 67 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-~~-~~~W~~~~--~~l---~~~--~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~ 67 (505)
+.+|++++|.|.+.+.+ .+ .+.|+|++ ..+ ... ........|+... ..+|.|.+++ .+|+|.|+|.
T Consensus 31 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~ 109 (234)
T 2j6e_L 31 GTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLR-SEDEADYYCA 109 (234)
T ss_dssp BCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCC-STTCSEEEEE
T ss_pred eeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCC-HHHCEEEEEE
Confidence 46899999999998754 34 79999963 221 000 0000123466543 2489999999 9999999999
Q ss_pred EEcccCc---eEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCCCcEE--
Q psy14886 68 AKNQLKT---RYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGGRRK-- 137 (505)
Q Consensus 68 ~~~~~~~---~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~~~-- 137 (505)
+.+..+. ....+.|.|.. .+|.+...+.. ..+.+|+.++|.|.+.+. |. +.+.|+++|..+..+....
T Consensus 110 ~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 187 (234)
T 2j6e_L 110 TWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPS--SEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKP 187 (234)
T ss_dssp EEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCC--HHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCC
T ss_pred EEcCCcceeEecCCEEEEEecCCCCCCcccccCCC--hhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCc
Confidence 9987762 12234555532 23444332211 123468899999999885 43 4999999999886431110
Q ss_pred -EeeC------CCEEEcCCCCCCCEEEEEEEEcCCCceee
Q psy14886 138 -IFEN------GNLLISPVSRDDSGIYSCTATNVHGMDES 170 (505)
Q Consensus 138 -~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~ 170 (505)
...+ ..|.|.++..+|.|.|+|.|.|.......
T Consensus 188 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 188 SKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp CCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred eECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 0111 24888899999999999999998665433
No 297
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.73 E-value=4.6e-18 Score=149.62 Aligned_cols=164 Identities=16% Similarity=0.257 Sum_probs=109.3
Q ss_pred CCCCCceEEEEEEeccC-----CCeEEEEECC--EEC---cCC--CCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEE
Q psy14886 1 MDNQADLTWTCEAFGVP-----DVTYSWFRNG--ELL---NSE--TLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMY 64 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-----~~~~~W~~~~--~~l---~~~--~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y 64 (505)
+.+|++++|.|.+.+.+ .+.|.|+|++ ..+ ... .......+|+... + .+|.|.+++ .+|+|.|
T Consensus 46 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y 124 (252)
T 3bkj_L 46 VNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVE-AEDLGVY 124 (252)
T ss_dssp ECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCEEE
T ss_pred EeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCC-cccCEEE
Confidence 46899999999998876 5899999964 111 000 0000123566553 1 289999999 9999999
Q ss_pred EEEEEcccCceEe-eEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecCCCcEE--
Q psy14886 65 QCRAKNQLKTRYS-SAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGSGGRRK-- 137 (505)
Q Consensus 65 ~C~~~~~~~~~~~-~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~~~~~~-- 137 (505)
+|.+.+..+.... ...|.|.. .+|.+...+.. ..+.+|+.++|.|.+.+. |.+ .+.|+++|..+.......
T Consensus 125 ~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~ 202 (252)
T 3bkj_L 125 YCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWT 202 (252)
T ss_dssp EEEECSBSSCEECCCEEEEECCCCBCCEEEEECCC--HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEEC
T ss_pred EEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCC--hhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecC
Confidence 9999887553322 34566653 23444332211 113468999999999884 543 899999999876441111
Q ss_pred --EeeCC------CEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 138 --IFENG------NLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 138 --~~~~~------~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
...++ .|.|.++..+|+|.|+|.|.|....
T Consensus 203 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 203 DQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred cccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 11122 3889999999999999999987544
No 298
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.73 E-value=2.1e-16 Score=149.44 Aligned_cols=213 Identities=15% Similarity=0.111 Sum_probs=142.0
Q ss_pred cCCCCCCEEEEEEEEecCCcEEEEEEEEE----cCCCCCCCceEEEEEeCCeEEEEeecCCCCC-------CCCceEEEE
Q psy14886 247 NASFADAGEYECVVKSTVGKISTKTTVIV----EGPPGLPGGVQVVEVHKTSATIQWTDGATNG-------RPITHYKII 315 (505)
Q Consensus 247 ~~~~~~~g~y~C~~~n~~g~~~~~~~l~v----~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~-------~~i~~y~v~ 315 (505)
.+.....+.++..|.| .+.......... .....||. +.+. ...+++.|+|. |...+ +.+.+|.|.
T Consensus 71 ~l~~~~~Y~~rV~A~n-~~~S~~s~~~~~~~~~~~~~~pP~-v~~~-~~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~ 146 (414)
T 3se4_A 71 KLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLE-AEDKAIVIHIS-PGTKDSVMWALDGLSFTYSLV 146 (414)
T ss_dssp CCCTTSCEEEEEEEEE-TTEEEEEECCCBCHHHHCCCCCCE-EEEE-ECSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEE
T ss_pred cccCCCcEEEEEEEee-CCcCCCEecCceeecccceeCCCe-EEEE-EcCCEEEEEEE-cCCCCCceeeeecCcEEEEEE
Confidence 3455667788888888 443322211111 22344554 6554 34568999999 54222 357899999
Q ss_pred EEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCceeEEEEEEEcC--CCcCCCCCCCCCccCCCCCCCCCCcee
Q psy14886 316 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE--LGYGEPSSPSPQYNTPADKPYQAPSRI 393 (505)
Q Consensus 316 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~--~G~~~~s~~~~~~~t~~~~p~~~P~~~ 393 (505)
|+..+...+..... ....+.+.+ |.|++.|.|+|+|.|. .|.|.+|... .+.+....|..+|.++
T Consensus 147 y~~~~~~~~~~~~~-----------~~~~~~i~~-L~p~t~Y~~~V~A~n~~~~g~g~~S~~~-~~~t~~~~~~~~P~~v 213 (414)
T 3se4_A 147 IWKNSSGVEERIEN-----------IYSRHKIYK-LSPETTYCLKVKAALLTSWKIGVYSPVH-CIKTTVENELPPPENI 213 (414)
T ss_dssp EEETTTCCEEEEEE-----------ECSEEEECC-CCTTCEEEEEEEEECTTTCCEEEECCCE-EEECCSCCSSCCCEEE
T ss_pred EEECCCCceEEEec-----------CCcEEEEcC-CCCCCeEEEEEEEEeccCCCCCccCccc-ccccccccccCCCCcc
Confidence 98887655433211 122344444 9999999999999994 6778877664 5677777778899999
Q ss_pred eeeccccccEEEEEEeCCccccCCCCceEEEEEEEc--------CCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEE
Q psy14886 394 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK--------NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465 (505)
Q Consensus 394 ~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v 465 (505)
.+...+ .++.|.|++++ ...+|.|+|+.. +...|.............+.+.. +|.+++.|.|+|
T Consensus 214 ~~~~~~-~~~~l~W~pp~------~~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~-~l~~~~~Y~~rV 285 (414)
T 3se4_A 214 EVSVQN-QNYVLKWDYTY------ANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQ-NVFQKGIYLLRV 285 (414)
T ss_dssp EEEEET-TEEEEEEECSS------SSCEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEG-GGSCSSEEEEEE
T ss_pred EEEEec-CCeEEEECCCC------CCeEEEEEEEehhccccccccccCceECCCccCCCCCEEcCCc-ccccCccEEEEE
Confidence 987654 67999999832 245999999974 24556533111111123333332 699999999999
Q ss_pred EEecCCCCCCCCceEEEee
Q psy14886 466 QAINDVGPGPESEVVTIWH 484 (505)
Q Consensus 466 ~a~n~~G~g~~s~~~~~~t 484 (505)
+|+|..|.|++|+...+.|
T Consensus 286 ~A~n~~g~s~~s~~~~~~t 304 (414)
T 3se4_A 286 QASDGNNTSFWSEEIKFDT 304 (414)
T ss_dssp EEECSSSEEEECCCEEEET
T ss_pred EEecCCCcccccccccccc
Confidence 9999999999998888755
No 299
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.73 E-value=2.2e-17 Score=144.29 Aligned_cols=161 Identities=16% Similarity=0.231 Sum_probs=109.9
Q ss_pred CCCCCceEEEEEEeccC----CCeEEEEECC--EECc---CC--CCCCCCCCcEEEEC----CeEEEEcCCCCCCCeEEE
Q psy14886 1 MDNQADLTWTCEAFGVP----DVTYSWFRNG--ELLN---SE--TLPLEDQDRYFIQD----NVLTIRYLNPERDPAMYQ 65 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p----~~~~~W~~~~--~~l~---~~--~~~~~~~~~~~~~~----~~L~i~~~~~~~d~G~Y~ 65 (505)
+.+|++++|.|.+.+.| .+.|.|+|++ ..+. .. ........|+.+.. .+|.|.+++ .+|+|.|+
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~ 91 (240)
T 1moe_A 13 VSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE-ADDVATYY 91 (240)
T ss_dssp ECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCEEEE
T ss_pred ecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC-hhhCEEEE
Confidence 46899999999999877 7889999952 2111 00 00011235665532 279999999 99999999
Q ss_pred EEEEcccCc-eEeeEEEEEEecC----CCccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEe------
Q psy14886 66 CRAKNQLKT-RYSSAQLRVLTLK----PSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNII------ 130 (505)
Q Consensus 66 C~~~~~~~~-~~~~~~l~v~~~~----p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~------ 130 (505)
|.+.|..+. ....+.|.|...+ +.+.... +....+.+|++++|.|.+.+.| .+.+.|+++ +..+
T Consensus 92 C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~ 170 (240)
T 1moe_A 92 CQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQ-SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRI 170 (240)
T ss_dssp EEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEE
T ss_pred EEEccCCceeecCCEEEEEecCCCCCCceEEEeC-CCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEE
Confidence 999987654 2335677776532 2222111 2345689999999999998876 459999995 2211
Q ss_pred c-----------CCCcEEEeeC-----CCEEEcCCCCCCCEEEEEEEEc
Q psy14886 131 G-----------SGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATN 163 (505)
Q Consensus 131 ~-----------~~~~~~~~~~-----~~l~i~~v~~~d~G~y~C~~~~ 163 (505)
. ...++.+..+ .+|.|.+++.+|+|.|+|.|.+
T Consensus 171 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 171 DPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp ETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred cccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 0 1234444332 2599999999999999999985
No 300
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.73 E-value=1e-17 Score=130.62 Aligned_cols=120 Identities=20% Similarity=0.214 Sum_probs=97.7
Q ss_pred EEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCC--cEEEE
Q psy14886 361 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE--FQSET 438 (505)
Q Consensus 361 v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~ 438 (505)
|.|.|..|.|.+|.....+.|.+..| .+|.++.+...+.+++.|.|++ +.+.+|.|++|+|+|+..+... |....
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~ 79 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQP--PAAPNGIILAYQITHRLNTTTANTATVEV 79 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCC-CCCCCCEEEEECSSEEEEECCC--CSCCCSCCCEEEEEEEESSCCCSCCCEEE
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCC-CCCCceEEEecCCCEEEEEEcC--CCCCCCceEEEEEEEEECCCCCceEEEEE
Confidence 67899999999887544677777766 5899999988889999999998 4577889999999999977432 32222
Q ss_pred eeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 439 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 439 ~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
.. ...+.+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.+.|.+.
T Consensus 80 ~~----~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 80 LA----PSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EC----TTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred eC----CCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 22 2346789999999999999999999999999999999988643
No 301
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.72 E-value=1.3e-18 Score=149.95 Aligned_cols=169 Identities=19% Similarity=0.201 Sum_probs=113.0
Q ss_pred CCCCCceEEEEEEec-cCCC----eEEEEECCEECcCCCC------CCCCCCcEEEE---------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFG-VPDV----TYSWFRNGELLNSETL------PLEDQDRYFIQ---------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~-~p~~----~~~W~~~~~~l~~~~~------~~~~~~~~~~~---------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+ .+.+ .+.|+|++........ .....+|+.+. +.+|.|.+++ .+|
T Consensus 11 ~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~-~~D 89 (221)
T 3eow_R 11 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR-VED 89 (221)
T ss_dssp CCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSS-CCC
T ss_pred EEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCC-hHH
Confidence 468999999999954 4433 4999998653221100 00013344332 4589999999 999
Q ss_pred CeEEEEEEEccc-CceEeeEEEEEEecCCCccCCCCCceEEeeCCCeE-EEEeecC-CCCCCeEEEEECCEEecCCCcEE
Q psy14886 61 PAMYQCRAKNQL-KTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNV-TIFCNPE-AAPKPKFVWKKDGNIIGSGGRRK 137 (505)
Q Consensus 61 ~G~Y~C~~~~~~-~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v-~l~C~~~-~~p~~~i~W~~~g~~~~~~~~~~ 137 (505)
+|.|+|.+.+.. +.....+.|.|.. +|.+...+... ..+|+.+ .|.|.+. +.|.+.+.|++++..........
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~L~V~~-~P~~~~~~~~~---~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~ 165 (221)
T 3eow_R 90 EGSYTCLFVTFPQGSRSVDIWLRVLA-KPQNTAEVQKV---QLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVP 165 (221)
T ss_dssp CSCBEEEEEESSSCSCEEECCCCCCC-CCEEEEEEECC---CCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEEC
T ss_pred CeEEEEEEEeCCCCceEEEEEEEEEE-CCCceeecCCc---ccCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceee
Confidence 999999999865 6666677777775 66554432111 1578888 5999976 78889999998754322111111
Q ss_pred Eee------CCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEE
Q psy14886 138 IFE------NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174 (505)
Q Consensus 138 ~~~------~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l 174 (505)
... ...|.|.++..+|+|.|+|.|.|..+.....+.+
T Consensus 166 ~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v 208 (221)
T 3eow_R 166 GFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTV 208 (221)
T ss_dssp CCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEE
T ss_pred cCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEE
Confidence 111 1248999999999999999999987765444433
No 302
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.72 E-value=7.6e-17 Score=137.88 Aligned_cols=173 Identities=18% Similarity=0.230 Sum_probs=114.5
Q ss_pred ceEEeeCCCeEEEEeecCCCC---CCeEEEEEC--CEEe------------cCCCcEEEeeCC---CEEEcCCCCCCCEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP---KPKFVWKKD--GNII------------GSGGRRKIFENG---NLLISPVSRDDSGI 156 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p---~~~i~W~~~--g~~~------------~~~~~~~~~~~~---~l~i~~v~~~d~G~ 156 (505)
....+.+|++++|.|.+.+.| .+.+.|+++ +..+ ....++.....+ .|.|.+++.+|+|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 87 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAI 87 (212)
T ss_dssp SEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEE
Confidence 456789999999999998877 478999985 2222 112344443322 69999999999999
Q ss_pred EEEEEEcCCCcee-eeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc-
Q psy14886 157 YSCTATNVHGMDE-SKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE- 230 (505)
Q Consensus 157 y~C~~~~~~g~~~-~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~- 230 (505)
|.|.+.+..+... ....|.|.. +|.+.... .......|+.+.|.|.+.+.+++.+.+.|+++|..+.......
T Consensus 88 Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~-~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~ 166 (212)
T 1q0x_L 88 YFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFP-PSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQ 166 (212)
T ss_dssp EEEEEECSSCEEECCCEEEEECCSCCBCCEEEEEC-CCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC
T ss_pred EEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeC-CCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCC
Confidence 9999998766432 234566632 33332222 2222335789999999998765556888999998886531100
Q ss_pred -c-cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE
Q psy14886 231 -L-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270 (505)
Q Consensus 231 -~-~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~ 270 (505)
. .........+.|.|.....+|.|.|+|.|.|........
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 167 PSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred ceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 0 000011112367888888889999999999987654433
No 303
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.72 E-value=5.5e-18 Score=148.68 Aligned_cols=163 Identities=17% Similarity=0.293 Sum_probs=109.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEE----------------CCEECcCCCCCCCCCCcEEEE-----CCeEEEEcCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFR----------------NGELLNSETLPLEDQDRYFIQ-----DNVLTIRYLNPER 59 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~----------------~~~~l~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~~ 59 (505)
+.+|++++|.|.+.+.+.+.|.|+| ++...... ...+|+.+. ..+|.|.+++ .+
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~L~I~~v~-~~ 87 (246)
T 4dzb_B 13 SKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQG----VEKDKFLINHASLTLSTLTVTSAH-PE 87 (246)
T ss_dssp EETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTT----CCGGGEEEEEEETTEEEEEECSCC-GG
T ss_pred EeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCc----ccCCcEEEEecCCCEEEEEECCCC-HH
Confidence 3589999999999988889999999 22222211 122566653 2379999999 99
Q ss_pred CCeEEEEEEEcccC----ceEeeEEEEEEe-----cCCCccCCCCCceEEeeCCCeEEEEeecCCCCCC--eEEEEECCE
Q psy14886 60 DPAMYQCRAKNQLK----TRYSSAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP--KFVWKKDGN 128 (505)
Q Consensus 60 d~G~Y~C~~~~~~~----~~~~~~~l~v~~-----~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~--~i~W~~~g~ 128 (505)
|+|.|+|.+.+..+ .....+.|.|.. .+|.+.... +....+.+|+.++|.|.+.+.+++ .+.|+++|.
T Consensus 88 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 166 (246)
T 4dzb_B 88 DSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 166 (246)
T ss_dssp GCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred HCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeec-CCchhccCCCcEEEEEEEccCcCCceEEEEEECCE
Confidence 99999999986543 122345677764 233332221 112224569999999999886544 899999999
Q ss_pred EecCCCcEEEe--------eCC------CEEEcCCCCCC-CEEEEEEEEcCCCcee
Q psy14886 129 IIGSGGRRKIF--------ENG------NLLISPVSRDD-SGIYSCTATNVHGMDE 169 (505)
Q Consensus 129 ~~~~~~~~~~~--------~~~------~l~i~~v~~~d-~G~y~C~~~~~~g~~~ 169 (505)
.+......... .++ .|.|.....+| .|.|+|.|.|......
T Consensus 167 ~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 167 EVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 88653221110 122 27778777777 9999999998754433
No 304
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.72 E-value=8.8e-17 Score=137.76 Aligned_cols=168 Identities=21% Similarity=0.243 Sum_probs=120.8
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
+.+|+.++|.|.+.|.|.+.|.|+|++..+... ...++.+. .++|.|.+++ .+|+|.|+|.|.|..|...
T Consensus 30 ~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~-----~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~a~n~~g~~~ 103 (215)
T 3mtr_A 30 TWEGNQVNITCEVFAYPSATISWFRDGQLLPSS-----NYSNIKIYNTPSASYLEVTPDS-ENDFGNYNCTAVNRIGQES 103 (215)
T ss_dssp ECTTCCEEEEEEEEEESCCEEEEEETTEESSCS-----SSCSEEEEEETTEEEEEECCCS-GGGCEEEEEEEECSSCEEE
T ss_pred EECCCCEEEEEEEeecCCCEEEEEECCeECCCC-----CCccEEEecCCCeeEEEEecCC-hhhCeEEEEEEEECCCceE
Confidence 358999999999999999999999999998743 22344443 4689999999 9999999999999999888
Q ss_pred eeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecC----CCCCC--eEEEEECCEEecCCCcEEEe---eCCCEEEc
Q psy14886 77 SSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPE----AAPKP--KFVWKKDGNIIGSGGRRKIF---ENGNLLIS 147 (505)
Q Consensus 77 ~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~----~~p~~--~i~W~~~g~~~~~~~~~~~~---~~~~l~i~ 147 (505)
..+.|.|.. +|..... . .....+..+.|.|... +.|.. .+.|.+++...-........ ....|.|.
T Consensus 104 ~~~~l~v~~-~P~~p~~---~-~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~ 178 (215)
T 3mtr_A 104 LEFILVQAD-TPSSPSI---D-QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIV 178 (215)
T ss_dssp EEEEEEECC-CCCCCEE---E-EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEE
T ss_pred EEEEEEECC-CCCCCcc---e-EEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEEC
Confidence 888888875 3332111 1 1234567899999742 22322 47888876432111000111 11579999
Q ss_pred CCCCCCCEEEEEEEEcCCCceeeeEEEEEEeC
Q psy14886 148 PVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 179 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~~ 179 (505)
++...+.|.|+|.|.|..|....+..+.+..+
T Consensus 179 ~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~ 210 (215)
T 3mtr_A 179 GLKPETTYAVRLAALNGKGLGEISAASEFKTQ 210 (215)
T ss_dssp CCCTTCEEEEEEEEEESSCBCCCCCCEEEECC
T ss_pred CCCCCCEEEEEEEEEeCCcccCcccceeeEec
Confidence 99999999999999999998877766665443
No 305
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.72 E-value=2.6e-17 Score=142.90 Aligned_cols=165 Identities=14% Similarity=0.190 Sum_probs=115.0
Q ss_pred CceEEeeCCCeEEEEeecCCCCC-CeEEEEECCEEec---------C----CCcEE----------EeeCCCEEEcCCCC
Q psy14886 96 ESETYAGEGGNVTIFCNPEAAPK-PKFVWKKDGNIIG---------S----GGRRK----------IFENGNLLISPVSR 151 (505)
Q Consensus 96 ~~~~~v~~g~~v~l~C~~~~~p~-~~i~W~~~g~~~~---------~----~~~~~----------~~~~~~l~i~~v~~ 151 (505)
+..+.+.+|+++.|.|.+.+.+. +.+.|++++.... . ..+.. +..++.|.|.+++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~ 86 (231)
T 2pet_A 7 PPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQV 86 (231)
T ss_dssp CSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCG
T ss_pred CCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCc
Confidence 35678999999999999999885 8999998543211 0 11222 44456799999999
Q ss_pred CCCEEEEEEEEcCC-CceeeeEEEEEEeCCee--eeeCCCceEEEeeccE-EEEEEe-eecCCCCeEEEEEeCCEEecCC
Q psy14886 152 DDSGIYSCTATNVH-GMDESKGRLIVLHGPSY--YEQLPPKITIAAHRNL-QLRCSA-HTEELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 152 ~d~G~y~C~~~~~~-g~~~~~~~l~v~~~p~~--~~~~~~~~~~~~g~~~-~l~C~~-~~~~~~~~~~~w~~~~~~~~~~ 226 (505)
+|+|.|+|.+.+.. +.....+.|.|..+|.. +...+....+..|+.+ .|.|.+ .+.|.+ .+.|++++..+...
T Consensus 87 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p--~i~W~~~~~~~~~~ 164 (231)
T 2pet_A 87 GDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAP--KITWYRNGQRLEVP 164 (231)
T ss_dssp GGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCC--EEEEEETTEECCCC
T ss_pred ccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCC--EEEEEECCccCccc
Confidence 99999999999987 77777788888876543 2223334445577777 999999 777765 56799999988654
Q ss_pred CCCcccCCeee-----ec------CCeEEEecCCCCCCEEEEEEEEec
Q psy14886 227 DLNELETPNIN-----ID------GGLLEITNASFADAGEYECVVKST 263 (505)
Q Consensus 227 ~~~~~~~~~~~-----~~------~~~l~i~~~~~~~~g~y~C~~~n~ 263 (505)
..... ..... .. .+.|.+.....+|.|.|+|.|.|.
T Consensus 165 ~~~~~-~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 165 VEMNP-EGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SSCCS-SEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred ccccc-ceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 31000 00000 00 145777755666799999999994
No 306
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.72 E-value=4.3e-16 Score=144.62 Aligned_cols=222 Identities=15% Similarity=0.112 Sum_probs=132.1
Q ss_pred CEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEe-CCeEEEEeecCCC-C--CCCCceEEEEEEeCCCCCeEEee
Q psy14886 253 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH-KTSATIQWTDGAT-N--GRPITHYKIIARTNWNSTWFNVS 328 (505)
Q Consensus 253 ~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~-~~~v~l~w~~~~~-~--~~~i~~y~v~~~~~~~~~w~~~~ 328 (505)
.+.++..+.+..|.....- ....|.||.++.+.... .+++.|+|+++.+ . ++.+..|+++|+..+...|....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~---~~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~~~ 85 (380)
T 3lb6_C 9 GCLYTFLISTTFGCTSSSD---TEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTII 85 (380)
T ss_dssp -------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEEEE
T ss_pred hhhhhheeecccccccCCc---ccccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceEEE
Confidence 4455666666666432211 12257889999988766 6889999999876 2 35689999999998878898865
Q ss_pred eccccceeeeecCceeeEEeeeccCCceeEEEEEEEcC----CCcCCCCCCCCCcc--CCCCCCCCCCceeeeecccccc
Q psy14886 329 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE----LGYGEPSSPSPQYN--TPADKPYQAPSRIGGGGGKIGD 402 (505)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~n~----~G~~~~s~~~~~~~--t~~~~p~~~P~~~~~~~~~~~~ 402 (505)
...+ . .... +..+..|+|||+|.|. .|.|.+|.++..+. +.++.|+.+|.++.....+.+.
T Consensus 86 ~~~~-----------~-~~~~-~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~ 152 (380)
T 3lb6_C 86 TKNL-----------H-YKDG-FDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQY 152 (380)
T ss_dssp ESSS-----------E-EEEE-CCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTE
T ss_pred eccE-----------E-EEEe-ecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcE
Confidence 4311 1 2223 5569999999999976 77777776542322 3557888999999998888899
Q ss_pred EEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEE--eeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceE
Q psy14886 403 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET--LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 480 (505)
Q Consensus 403 v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~ 480 (505)
+.++|+++ .+ .+..++|+|.|+..+...+.... ....+....+.+...++.+++.|.|+|.|.|..|.++.+..
T Consensus 153 l~csW~p~--~~-~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~~~- 228 (380)
T 3lb6_C 153 LLCSWKPG--IG-VLLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYF- 228 (380)
T ss_dssp EEEEEECC---------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCEEE-
T ss_pred EEEEEcCC--CC-CCCCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeeccccE-
Confidence 99999983 22 25678999999987644433221 11111222345555567889999999999999998875443
Q ss_pred EE------eecceEEEEEEE
Q psy14886 481 TI------WHDPLVIISYVC 494 (505)
Q Consensus 481 ~~------~t~p~~~~~~~~ 494 (505)
.+ ...||....+.+
T Consensus 229 ~~~~~~~v~p~pP~~l~v~~ 248 (380)
T 3lb6_C 229 TFQLQNIVKPLPPVYLTFTR 248 (380)
T ss_dssp EECGGGSCCCCCCEEEEEC-
T ss_pred EEcHHHcccCCCCceEEEEE
Confidence 23 234665555554
No 307
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.72 E-value=3.4e-16 Score=128.98 Aligned_cols=155 Identities=21% Similarity=0.296 Sum_probs=113.5
Q ss_pred ceEEeeCCCeEEEEeecCC--CCCCeEEEEE--CCEEe----------cCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEA--APKPKFVWKK--DGNII----------GSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 162 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~--~p~~~i~W~~--~g~~~----------~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~ 162 (505)
..+...+|++|+|.|.... .+.+.|.|++ ++..+ ....++.+..+++|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEE
Confidence 4467889999999996533 4566999999 88776 34567788888999999999999999999999
Q ss_pred cCCCcee--eeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecC
Q psy14886 163 NVHGMDE--SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 240 (505)
Q Consensus 163 ~~~g~~~--~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 240 (505)
|..|... ..+.|.|..+.. .+.+. ..+..+.|.|.+.+.+. +.+.|+++|..+ .. ..
T Consensus 87 n~~g~~~~~~~~~L~V~~~~~-----~P~i~-~~~~~v~L~C~~~~~p~--~~~~W~~~g~~l-~~------------~~ 145 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERVS-----KPKIS-WTCINTTLTCEVMNGTD--PELNLYQDGKHL-KL------------SQ 145 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCCC-----CCEEE-EETTTTEEEEECSSCSS--CEEEEEESSCEE-EE------------ES
T ss_pred eCCCceeEEEEEEEEEcCcCC-----CCEEE-EccCcEEEEeEccCCCC--CEEEEEECCEEC-CC------------CC
Confidence 9888754 346677765321 11111 12347999999988764 467899998877 21 12
Q ss_pred CeEEEecCCCCCCEEEEEEEEecCCcEEEEEEE
Q psy14886 241 GLLEITNASFADAGEYECVVKSTVGKISTKTTV 273 (505)
Q Consensus 241 ~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l 273 (505)
..+.+.. ..+|.|.|+|.|.|..|.......+
T Consensus 146 ~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 146 RVITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp SCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred cEEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 2333333 4689999999999999987766554
No 308
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.72 E-value=5.9e-17 Score=142.98 Aligned_cols=163 Identities=18% Similarity=0.290 Sum_probs=108.0
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEECC--EECc---C--CCCCCCCCCcEEEEC----CeEEEEcCCCCCCCeEEEEE
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRNG--ELLN---S--ETLPLEDQDRYFIQD----NVLTIRYLNPERDPAMYQCR 67 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~~--~~l~---~--~~~~~~~~~~~~~~~----~~L~i~~~~~~~d~G~Y~C~ 67 (505)
|.+|++++|.|.+.+. +.+.+.|+|++ ..+. . ........+|+.... .+|.|.+++ .+|+|.|+|.
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~DsG~Y~C~ 92 (256)
T 3ux9_B 14 GAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQ-SEDEADYYCQ 92 (256)
T ss_dssp ECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCC-GGGCEEEEEE
T ss_pred EcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCC-hhhCEEEEEE
Confidence 4689999999999876 67899999942 1111 0 000111235665532 379999999 9999999999
Q ss_pred EEcccCce---EeeEEEEEEecCC------------------CccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEE
Q psy14886 68 AKNQLKTR---YSSAQLRVLTLKP------------------SFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWK 124 (505)
Q Consensus 68 ~~~~~~~~---~~~~~l~v~~~~p------------------~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~ 124 (505)
+.+..+.. ...+.|.|...+. .+.+.. .....+.+|++++|.|.+.+.+ .+.+.|+
T Consensus 93 ~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~ 171 (256)
T 3ux9_B 93 VRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTFSSYAMSWV 171 (256)
T ss_dssp EEETTTTEEEECCCEEEEEC----------------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred EEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc-CCCeEEcCCCeEEEEEEEeCCcccccEEEEE
Confidence 99764422 2245677765221 111111 1234588999999999998876 6799999
Q ss_pred EC--CEEe------c-----------CCCcEEEeeCC-----CEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 125 KD--GNII------G-----------SGGRRKIFENG-----NLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 125 ~~--g~~~------~-----------~~~~~~~~~~~-----~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
++ +..+ . ...++.+..+. +|.|.+++.+|+|.|+|.|.+..
T Consensus 172 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 172 RQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 85 3221 1 11244444332 39999999999999999999864
No 309
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.72 E-value=2.9e-17 Score=140.36 Aligned_cols=171 Identities=18% Similarity=0.232 Sum_probs=116.2
Q ss_pred eEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEEec------------CCCcEEEee---CCCEEEcCCCCCCCEEEEEE
Q psy14886 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIG------------SGGRRKIFE---NGNLLISPVSRDDSGIYSCT 160 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~~~------------~~~~~~~~~---~~~l~i~~v~~~d~G~y~C~ 160 (505)
.+.+.+|++++|.|.+. +.+.+.|+++ +..+. ...++.... +.+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 57789999999999998 7889999983 22211 123444322 23599999999999999999
Q ss_pred EEcCCC--ceeeeEEEEEE----eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc---c
Q psy14886 161 ATNVHG--MDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE---L 231 (505)
Q Consensus 161 ~~~~~g--~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~---~ 231 (505)
+.+..+ .....+.|.|. .+|.+... +.......|+.+.|.|.+.+.+++.+.+.|+++|..+....... .
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 165 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLF-PPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSK 165 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEE-CCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEE
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEec-CCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceE
Confidence 999887 34445677776 23433332 22222336899999999998766567889999999885421000 0
Q ss_pred cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEE
Q psy14886 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 271 (505)
Q Consensus 232 ~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~ 271 (505)
.........+.|.|.....+|.|.|+|.|.|..+.....+
T Consensus 166 ~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 166 QSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 0001111124577887777889999999999887655544
No 310
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.72 E-value=1.4e-17 Score=143.60 Aligned_cols=175 Identities=20% Similarity=0.346 Sum_probs=115.3
Q ss_pred EEeeCCCeEEEEeecCCCCC-----CeEEEEECCEEe-------------cCCCcEEEee------CCCEEEcCCCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAPK-----PKFVWKKDGNII-------------GSGGRRKIFE------NGNLLISPVSRDDS 154 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p~-----~~i~W~~~g~~~-------------~~~~~~~~~~------~~~l~i~~v~~~d~ 154 (505)
+.+.+|++++|.|.+.+.+. +.+.|++++... ....+..+.. +.+|.|.+++.+|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 45789999999999988753 689999976332 1123333332 45799999999999
Q ss_pred EEEEEEEEcCCCceeeeEEEEEEeCCe-eeeeCCCceEEEeeccEEEEEEe-eecCCCCeEEEEEe-CCEEecCCCCCcc
Q psy14886 155 GIYSCTATNVHGMDESKGRLIVLHGPS-YYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTH-NGVRIGNMDLNEL 231 (505)
Q Consensus 155 G~y~C~~~~~~g~~~~~~~l~v~~~p~-~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~~~w~~-~~~~~~~~~~~~~ 231 (505)
|.|+|.+.+. +.....+.|.|...+. ..........+..|+.+.|.|.+ .+.|.+ .+.|++ ++..+.....
T Consensus 85 G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~--~v~W~~~~~~~~~~~~~--- 158 (222)
T 4i0k_A 85 GSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEA--EVFWKDGQGVPLTGNVT--- 158 (222)
T ss_dssp SCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCC--EEEEECTTSCBCCSEEE---
T ss_pred EEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCC--eEEEEcCCCccCCCCcc---
Confidence 9999999985 3444556666654321 11122233456789999999999 666654 567988 4433322100
Q ss_pred cCCeeeecCC---eEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCC
Q psy14886 232 ETPNINIDGG---LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 280 (505)
Q Consensus 232 ~~~~~~~~~~---~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~ 280 (505)
......... .|.+..+..+|.|.|+|.|.|..|.....+.|.|..+|.
T Consensus 159 -~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 159 -TSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp -EEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC---
T ss_pred -eeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcc
Confidence 001111122 367888889999999999999999999999999987764
No 311
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.71 E-value=4.9e-17 Score=144.65 Aligned_cols=199 Identities=18% Similarity=0.199 Sum_probs=109.3
Q ss_pred CCCCeEEEEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEE--CCEEe-----
Q psy14886 58 ERDPAMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNII----- 130 (505)
Q Consensus 58 ~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~--~g~~~----- 130 (505)
+.|.+.|.|.+.+..|.......+.|.. + +..+.+.+|++++|.|.+.+ +.+.+.|++ .+...
T Consensus 5 ~~~~~~y~~~~~~~~g~~~~~~~~~v~~-~--------p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~ 74 (270)
T 3qib_D 5 RADLIAYLKQATKGGGGSGGGGGMKVIQ-T--------PRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLIN 74 (270)
T ss_dssp -----------------------CCCEE-E--------CSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEE
T ss_pred hhhHHHHHHHHhccCCccccccceeEEe-C--------CCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEE
Confidence 7899999999988766544443333332 1 24467899999999999865 667999998 22110
Q ss_pred -------cCC---C-cEEEee----CCCEEEcCCCCCCCEEEEEEEEcCCC----ceeeeEEEEEEe------CCeeeee
Q psy14886 131 -------GSG---G-RRKIFE----NGNLLISPVSRDDSGIYSCTATNVHG----MDESKGRLIVLH------GPSYYEQ 185 (505)
Q Consensus 131 -------~~~---~-~~~~~~----~~~l~i~~v~~~d~G~y~C~~~~~~g----~~~~~~~l~v~~------~p~~~~~ 185 (505)
... . ++.... +.+|.|.+++.+|+|.|.|.+.+... .......|.|.. +|.+...
T Consensus 75 ~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~ 154 (270)
T 3qib_D 75 FQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVF 154 (270)
T ss_dssp EETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEE
T ss_pred ECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEE
Confidence 000 0 444332 23599999999999999999996432 222335677765 3333332
Q ss_pred CCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcc--------cCCeeeecCCeEEEecCCCCC-CEEE
Q psy14886 186 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL--------ETPNINIDGGLLEITNASFAD-AGEY 256 (505)
Q Consensus 186 ~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~i~~~~~~~-~g~y 256 (505)
.+....+..|+.++|.|.+.+..++.+.+.|+++|..+........ .........+.|.|.....+| .|.|
T Consensus 155 ~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~Y 234 (270)
T 3qib_D 155 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 234 (270)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEE
T ss_pred CCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeE
Confidence 2333334458999999999985444568889999998865311000 000111112356676666666 9999
Q ss_pred EEEEEecCCc
Q psy14886 257 ECVVKSTVGK 266 (505)
Q Consensus 257 ~C~~~n~~g~ 266 (505)
+|.|.|....
T Consensus 235 tC~v~~~~l~ 244 (270)
T 3qib_D 235 RCQVQFYGLS 244 (270)
T ss_dssp EEEEEECCBC
T ss_pred EEEEEecCCC
Confidence 9999986554
No 312
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.71 E-value=4.6e-17 Score=135.42 Aligned_cols=153 Identities=17% Similarity=0.128 Sum_probs=107.1
Q ss_pred CCCCCceEEEEEEeccCCC--eEEEEECCEECcCCCCCCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCceEee
Q psy14886 1 MDNQADLTWTCEAFGVPDV--TYSWFRNGELLNSETLPLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTRYSS 78 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~--~~~W~~~~~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~~~ 78 (505)
|.+|++++|.|.+ +.|.+ .|+|++.+..+. ..+.......|.|.+++ .+|+|.|.|.+.+..+.....
T Consensus 19 v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~--------~~~~~~~~~~L~I~~v~-~~d~G~Y~C~a~n~~~~~~~~ 88 (210)
T 1gsm_A 19 VALGASRQLTCRL-ACADRGASVQWRGLDTSLG--------AVQSDTGRSVLTVRNAS-LSAAGTRVCVGSCGGRTFQHT 88 (210)
T ss_dssp EETTCCEEEEEEE-CCSSTTCEEEEESSTTTTC--------CEEEESSEEEEEECSCC-GGGCEEEEEEEEETTEEEEEE
T ss_pred EeCCCCEEEEEEC-CCCCCCcceEEeecccccC--------cEEecCCccEEEECccC-cccCceEEEEEEeCCCceEEE
Confidence 4579999999999 87776 999999554331 11112234689999999 999999999999988777778
Q ss_pred EEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC----CeEEEEECCEEecCCCcE--EE------e---eCC
Q psy14886 79 AQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK----PKFVWKKDGNIIGSGGRR--KI------F---ENG 142 (505)
Q Consensus 79 ~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~----~~i~W~~~g~~~~~~~~~--~~------~---~~~ 142 (505)
+.|.|+. +|....... . ....|+.+ |.|.+.+. |. ++|.|+|+++.+...... .. . ...
T Consensus 89 ~~ltV~~-~P~~~~i~~-~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 163 (210)
T 1gsm_A 89 VQLLVYA-FPNQLTVSP-A--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDV 163 (210)
T ss_dssp EEEEEEB-CCSEEEEES-S--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCC
T ss_pred EEEEEEe-cCCCcEEcc-c--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcce
Confidence 9999996 554332211 1 36678888 99999875 63 489999999998543210 11 0 111
Q ss_pred C------EEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 143 N------LLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 143 ~------l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
. +.+.....+|.+.|+|.|.+.....
T Consensus 164 ~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~ 195 (210)
T 1gsm_A 164 LFRVTERWRLPPLGTPVPPALYCQATMRLPGL 195 (210)
T ss_dssp CEEEEEEEECCCCCSSCCSEEEEEEEEEETTE
T ss_pred EEEEEEEEeecCCcccCCceEEEEEEeeCCCC
Confidence 2 3344666677789999998765433
No 313
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.71 E-value=7.4e-17 Score=141.49 Aligned_cols=162 Identities=15% Similarity=0.241 Sum_probs=107.2
Q ss_pred CCCCCceEEEEEEeccC-----CCeEEEEECC--EE---CcCC--CCCCCCCCcEEEE--C--CeEEEEcCCCCCCCeEE
Q psy14886 1 MDNQADLTWTCEAFGVP-----DVTYSWFRNG--EL---LNSE--TLPLEDQDRYFIQ--D--NVLTIRYLNPERDPAMY 64 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-----~~~~~W~~~~--~~---l~~~--~~~~~~~~~~~~~--~--~~L~i~~~~~~~d~G~Y 64 (505)
|.+|++++|.|.+.+.| .+.+.|+|++ .. +... ........|+.+. + .+|.|.+++ .+|+|.|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y 91 (247)
T 1svz_A 13 VSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVE-AEDLGIY 91 (247)
T ss_dssp ECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC-GGGCEEE
T ss_pred ecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCC-HHHCEEE
Confidence 46899999999998877 6899999942 11 1100 0000123566553 2 379999999 9999999
Q ss_pred EEEEEcccCceE-eeEEEEEEecC-----------CCccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEEECC--E
Q psy14886 65 QCRAKNQLKTRY-SSAQLRVLTLK-----------PSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--N 128 (505)
Q Consensus 65 ~C~~~~~~~~~~-~~~~l~v~~~~-----------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g--~ 128 (505)
+|.+.+..+... ..+.|.|...+ |.+.+... ....+.+|++++|.|.+.+.+ .+.+.|++++ .
T Consensus 92 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~ 170 (247)
T 1svz_A 92 YCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQS-GPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGG 170 (247)
T ss_dssp EEEECSSSSCEECCCEEEEEC---------------CCEEEEC-CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTC
T ss_pred EEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCC-CceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCC
Confidence 999998754422 24567776421 22222111 224589999999999998874 5699999952 2
Q ss_pred Ee------c-----------CCCcEEEeeC-----CCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 129 II------G-----------SGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 129 ~~------~-----------~~~~~~~~~~-----~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
.+ . ...++.+..+ .+|.|.+++.+|+|.|.|.|.|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 171 DLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 11 0 0234444321 36999999999999999999985
No 314
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.71 E-value=8e-17 Score=141.40 Aligned_cols=177 Identities=15% Similarity=0.202 Sum_probs=110.5
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCe-----EEEEECCEEecC--------CCcEEEe-------------eCCCEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPK-----FVWKKDGNIIGS--------GGRRKIF-------------ENGNLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~-----i~W~~~g~~~~~--------~~~~~~~-------------~~~~l~i~~v~ 150 (505)
....+.+|++++|.|.+.+.|.+. +.|++++..... +...... .+.+|.|.+++
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 90 (248)
T 3pv7_A 11 GTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQ 90 (248)
T ss_dssp SEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCC
T ss_pred CCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCC
Confidence 446788999999999998776554 999995322110 0000000 12349999999
Q ss_pred CCCCEEEEEEEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeee-cCCCCeEEEEEeCCEEecCCCC-
Q psy14886 151 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMDL- 228 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~~~w~~~~~~~~~~~~- 228 (505)
.+|+|.|+|.+.+..+.....+.|.|..+|.+..... .....|..+.|.|.+.+ .|.+ +.+.|++++..+.....
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~--~~~~~~~~~~L~C~~~g~~P~p-i~v~W~k~g~~l~~~~~~ 167 (248)
T 3pv7_A 91 LEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD--QVGMKENEDKYMCESSGFYPEA-INITWEKQTQKFPHPIEI 167 (248)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC----------CEEEEEEEEEBSSC-CEEEEEEECSSSCSCEEE
T ss_pred HHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC--CccccCCCcEEEEEEccEECCC-eEEEEEECCccCCCcccc
Confidence 9999999999999888777778899987776554332 33456777889999998 4543 47789998853321100
Q ss_pred --------CcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc--EEEEEEEEEc
Q psy14886 229 --------NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVIVE 276 (505)
Q Consensus 229 --------~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~--~~~~~~l~v~ 276 (505)
............+.|.+.....++.|.|+|.|.|..+. ....+.|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 168 SEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred ccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 00000011112246777778888999999999998886 5556666663
No 315
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.71 E-value=8.2e-17 Score=140.57 Aligned_cols=162 Identities=14% Similarity=0.194 Sum_probs=107.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EEC---cCC--CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELL---NSE--TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l---~~~--~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ... .......+|+.+. ..+|.|.+++ .+|+|.|.|.+.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 91 (242)
T 2znx_A 13 VTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVE-TEDFGMYFCQQS 91 (242)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC-GGGCEEEEEEEC
T ss_pred EcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCC-hHHCEEEEEeEe
Confidence 468999999999998888999999953 111 000 0000123566653 2379999999 999999999999
Q ss_pred cccCceE-eeEEEEEEecCC-----------CccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEec--
Q psy14886 70 NQLKTRY-SSAQLRVLTLKP-----------SFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG-- 131 (505)
Q Consensus 70 ~~~~~~~-~~~~l~v~~~~p-----------~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~~-- 131 (505)
+..+... ..+.|.|...+. .+.+.. +....+.+|++++|.|.+.+.+ .+.+.|+++ +..+.
T Consensus 92 n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l 170 (242)
T 2znx_A 92 NSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQE-SGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYM 170 (242)
T ss_dssp SSSSCEECCCEEEEEC---------------CCEEEE-ECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEE
T ss_pred cCCceEECCCEEEEEcCCCCCCcccccccccceeeec-CCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEE
Confidence 8754322 245677764221 111111 1223589999999999998875 478999984 32210
Q ss_pred --------------CCCcEEEeeC-----CCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 132 --------------SGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 132 --------------~~~~~~~~~~-----~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
...++.+..+ .+|.|.+++.+|+|.|+|.|.+.
T Consensus 171 ~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 171 GYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred EEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 1234444321 26999999999999999999874
No 316
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=9e-17 Score=126.16 Aligned_cols=117 Identities=23% Similarity=0.321 Sum_probs=94.8
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceee
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 447 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 447 (505)
|.|++|... .+.|.+..|+.+|.++.+...+.++|.|.|++++..+.+|.|++|+|+|+..+...+....+.. .....
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~ 78 (134)
T 2edx_A 1 GSSGSSGTI-EARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDG-ISREH 78 (134)
T ss_dssp CCCCCCCCC-CCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECC-CBTTC
T ss_pred CCCCCcCCE-EEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEe-eCCCc
Confidence 667777765 7888888998899999999888999999999965578899999999999988744332222221 11234
Q ss_pred EEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 448 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 448 ~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
+.+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 79 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 117 (134)
T 2edx_A 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDE 117 (134)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCC
Confidence 678899999999999999999999999999999988863
No 317
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.71 E-value=5.2e-17 Score=140.94 Aligned_cols=170 Identities=14% Similarity=0.190 Sum_probs=116.0
Q ss_pred EeeCCCeEEEEeecCCCCCCeEEEEECCEEecCC--CcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce--eeeEEEE
Q psy14886 100 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD--ESKGRLI 175 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~--~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~--~~~~~l~ 175 (505)
.+.+|++++|.|.+.+ +...+.|+|+|..+... ........+.|.|.+++.+|+|.|+|.+.+..+.. +..+.|.
T Consensus 17 ~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~ 95 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 95 (242)
T ss_dssp EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEE
T ss_pred ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEE
Confidence 5889999999999875 35689999999876411 00001123469999999999999999998764432 3446777
Q ss_pred EEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCC
Q psy14886 176 VLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 252 (505)
Q Consensus 176 v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~ 252 (505)
|.. +|.+... + ...+..|+.++|.|.+.+.+ ..+.|+++|..+... .........|.|..++.+|
T Consensus 96 V~~~~~~P~i~~~-p-~~~v~~G~~vtL~C~~~~~~---~~~~w~k~g~~~~~~-------~~~~~~~~~l~I~~v~~~d 163 (242)
T 1p6f_A 96 VTEMYDTPTLSVH-P-GPEVISGEKVTFYCRLDTAT---SMFLLLKEGRSSHVQ-------RGYGKVQAEFPLGPVTTAH 163 (242)
T ss_dssp EECCSCCCEEEEE-S-CSEEETTCEEEEEEECTTSC---SEEEEEECSSSCEEE-------EEECSSEEEEEEEECCGGG
T ss_pred eecccCCCceEcc-C-CCccCCCCcEEEEEecCCCC---CEEEEEECCCccCcc-------ccCCCceEEEEeCCCcccc
Confidence 764 3333322 2 34678999999999987542 377899988654320 1112234689999999999
Q ss_pred CEEEEEEEEecC---CcEEEEEEEEEcCCCCCC
Q psy14886 253 AGEYECVVKSTV---GKISTKTTVIVEGPPGLP 282 (505)
Q Consensus 253 ~g~y~C~~~n~~---g~~~~~~~l~v~~~p~~p 282 (505)
.|.|+|.+.|.. ...+..+.|.|..++..|
T Consensus 164 ~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P 196 (242)
T 1p6f_A 164 RGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENT 196 (242)
T ss_dssp CEEEEEEEEEETTEECCCCCCEEEEEEC-----
T ss_pred CEEEEEEEECCCCcccCCCCCEEEEEeccCCCC
Confidence 999999998864 234566788887765544
No 318
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.71 E-value=5.9e-17 Score=120.66 Aligned_cols=100 Identities=21% Similarity=0.218 Sum_probs=80.3
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCC-CceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeE
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP-NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~-i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y 461 (505)
++.|. +|.++.+...+.+ +.|+|++ +...+|. |++|+|+|+..+...|.............+.+.|.+|.|++.|
T Consensus 4 ~~~P~-~P~~~~~~~~~~~-v~l~W~~--P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 79 (105)
T 2haz_A 4 MDTPS-SPSIDQVEPYSST-AQVQFDE--PEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTY 79 (105)
T ss_dssp CCCCC-CCEEEEEEECSSC-EEEEEEC--CSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEE
T ss_pred CCCCc-CCCCCEEEEcCCc-EEEEEcC--CcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEE
Confidence 34554 4899998877777 9999998 3566666 9999999999987778644322212223467899999999999
Q ss_pred EEEEEEecCCCCCCCCceEEEeecc
Q psy14886 462 EVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 462 ~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
.|+|+|+|.+|.|++|+.+.+.|.|
T Consensus 80 ~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 80 AVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEcCCccCCCcCCEeeEEec
Confidence 9999999999999999999999987
No 319
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.70 E-value=9e-17 Score=138.35 Aligned_cols=166 Identities=19% Similarity=0.301 Sum_probs=110.1
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EE---CcC--C-----CCCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--EL---LNS--E-----TLPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~---l~~--~-----~~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ ...+.|+|++ .. +.. . .......+|+.+. ..+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 90 (223)
T 1dee_B 12 VQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR-AED 90 (223)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred EcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC-HHH
Confidence 46899999999998765 4789999943 11 100 0 0001124677653 2489999999 999
Q ss_pred CeEEEEEEEcccC----c-e-EeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEE-CCE
Q psy14886 61 PAMYQCRAKNQLK----T-R-YSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKK-DGN 128 (505)
Q Consensus 61 ~G~Y~C~~~~~~~----~-~-~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~-~g~ 128 (505)
+|.|.|.+.+..+ . . ...+.|.|... +|.+.... +...+.+|+.++|.|.+.+. |.+ .+.|++ +|.
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~ 168 (223)
T 1dee_B 91 TAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLV--SCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNS 168 (223)
T ss_dssp CEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEE--CTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSC
T ss_pred CEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEec--CCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCC
Confidence 9999999988643 1 1 12356777631 23322111 11124689999999999887 766 999999 888
Q ss_pred EecC---------CCcEEEeeCCCEEEcCCCC--CCCEEEEEEEEcCCCceeee
Q psy14886 129 IIGS---------GGRRKIFENGNLLISPVSR--DDSGIYSCTATNVHGMDESK 171 (505)
Q Consensus 129 ~~~~---------~~~~~~~~~~~l~i~~v~~--~d~G~y~C~~~~~~g~~~~~ 171 (505)
.+.. +..+. ....|.|..... +|.|.|+|.|.|..+.....
T Consensus 169 ~l~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 169 DISSTRGFPSVLRGGKYA--ATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp BCSCEEECCCEEETTEEE--EEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred ccceeEECCccccCCeEE--EEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 7643 01111 123477877766 78999999999988876543
No 320
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.70 E-value=1.2e-17 Score=142.11 Aligned_cols=162 Identities=13% Similarity=0.212 Sum_probs=105.9
Q ss_pred CCCCCceEEEEEEeccC----CCeEEEEECCEECcCCCC--C-CCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFGVP----DVTYSWFRNGELLNSETL--P-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p----~~~~~W~~~~~~l~~~~~--~-~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
|.+|++++|.|.+.+.+ ...|.|+|++..+..... . ....+++. ..++|.|.+++ .+|+|.|+|.|.|..+
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~~~-~~D~G~Y~C~a~~~~~ 92 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFR-SVSELPIMHQD-WLNGKEFKCRVNSAAF 92 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEE-EEEEEECCHHH-HHTTCCEEEEEECTTC
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEE-EEEEEEEehhH-cCCCCEEEEEEEccCC
Confidence 36899999999998874 359999999987652210 0 00122332 23579999999 9999999999998776
Q ss_pred ceEeeEEE----EEEecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCCC--cEEEeeCCC--
Q psy14886 74 TRYSSAQL----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGG--RRKIFENGN-- 143 (505)
Q Consensus 74 ~~~~~~~l----~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~~--~~~~~~~~~-- 143 (505)
.......+ .+. .+|.+.+.+.... ..+|+.+.|.|.+.|. |. +.+.|+++|..+.... ......+++
T Consensus 93 ~~~~~~~v~~~~~~~-~~P~v~~~~~~~~--~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~ 169 (207)
T 2vol_A 93 PAPIEKTISKTKGRP-KAPQVYTLPPPKE--QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYF 169 (207)
T ss_dssp SSCEEEEECCCCCCC-BCCEEEEECCCTG--GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEE
T ss_pred CCceEEEeccCCCCC-cCCeEEEeCCCHH--HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEE
Confidence 53222222 222 3455443332221 2358999999999884 54 4999999999875321 112233444
Q ss_pred ----EEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 144 ----LLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 144 ----l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
|.|.....+|.|.|+|.|.|....
T Consensus 170 ~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 170 VYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred EEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 444444556899999999987543
No 321
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.70 E-value=1.1e-16 Score=135.45 Aligned_cols=156 Identities=19% Similarity=0.312 Sum_probs=106.9
Q ss_pred eeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEEe--
Q psy14886 101 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-- 178 (505)
Q Consensus 101 v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~~-- 178 (505)
+.+|++++|.|.+ |.+.+.|+|+|..+... ...+++|.|.+++.+|+|.|+|.+.+.. ...+.+.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~---s~~~~v~v~~~~ 84 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL----TEDKKKWNLGSNAKDPRGMYQCKGSQNK---SKPLQVYYRMGS 84 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE----ESSCCCEEEEEGGGCCEEEEEEESSSSC---CCCEEEEEEC--
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC----CCCCCeEEeCCCCcCCCEEEEEEecCCC---CeeEEEEEEEec
Confidence 4689999999998 67899999999887532 1235679999999999999999975432 2224444430
Q ss_pred ----------------------------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc
Q psy14886 179 ----------------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 230 (505)
Q Consensus 179 ----------------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 230 (505)
.+..+.. .+......|+.+.|.|. +.|.+ .+.|++++..+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~v~~~G~~v~L~C~--g~p~p--~i~W~k~~~~l~~~~~-- 157 (204)
T 1sy6_A 85 ADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQ-TPYKVSISGTTVILTCP--QYPGS--EILWQHNDKNIGGDED-- 157 (204)
T ss_dssp ----------------------------------C-CCCEEEEETTEEEEECS--CCCSS--CEEEEETTEEESCCTT--
T ss_pred cccccccccccccccccccccccccccccccceec-CCceeeecCCcEEEEcC--CCCCC--ceEEEECCEECCCccC--
Confidence 0111111 11222238999999998 55555 4679999988754211
Q ss_pred ccCCeeeecCCeEEEecC-CCCCCEEEEEEEEecCCcE-EEEEEEEE
Q psy14886 231 LETPNINIDGGLLEITNA-SFADAGEYECVVKSTVGKI-STKTTVIV 275 (505)
Q Consensus 231 ~~~~~~~~~~~~l~i~~~-~~~~~g~y~C~~~n~~g~~-~~~~~l~v 275 (505)
.......+..|.|.++ ..+|+|.|+|.|.|..|.. +..+.|.+
T Consensus 158 --~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 158 --DKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp --CTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred --CceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 0122224789999999 9999999999999999963 44555544
No 322
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.70 E-value=2.5e-17 Score=141.75 Aligned_cols=168 Identities=15% Similarity=0.244 Sum_probs=110.6
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EE---CcC-CC--------CCCCCCCcEEEE----C--CeEEEEcCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--EL---LNS-ET--------LPLEDQDRYFIQ----D--NVLTIRYLNPE 58 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~---l~~-~~--------~~~~~~~~~~~~----~--~~L~i~~~~~~ 58 (505)
+.+|++++|.|.+.+.+ .+.+.|+|++ .. +.. .. ......+|+.+. . .+|.|.+++ .
T Consensus 12 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~ 90 (220)
T 1pz5_B 12 VQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLR-A 90 (220)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCC-G
T ss_pred EcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCC-H
Confidence 46899999999998765 6899999953 11 100 00 000013566653 1 289999999 9
Q ss_pred CCCeEEEEEEEcccCce-E--eeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEe
Q psy14886 59 RDPAMYQCRAKNQLKTR-Y--SSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNII 130 (505)
Q Consensus 59 ~d~G~Y~C~~~~~~~~~-~--~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~ 130 (505)
+|+|.|+|.+.+..+.. . ..+.|.|... +|.+...+ +...+.+|+.++|.|.+.|. |.+ .+.|++++...
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~ 168 (220)
T 1pz5_B 91 EDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLV--PGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSS 168 (220)
T ss_dssp GGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEEC--CCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred HHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcc--cccccCCCCcEEEEEEEEEEeCCCeEEEEecCCccc
Confidence 99999999999865332 1 3466777631 23332222 11235689999999999887 888 99999987631
Q ss_pred c--CCCc----EEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeE
Q psy14886 131 G--SGGR----RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKG 172 (505)
Q Consensus 131 ~--~~~~----~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~ 172 (505)
. .... ......+.|.|.++..+| |.|+|.|.|..|.....+
T Consensus 169 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 169 GVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp TEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred ceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 0 0000 011123468888888766 999999999988765543
No 323
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.70 E-value=3.6e-16 Score=139.05 Aligned_cols=175 Identities=20% Similarity=0.331 Sum_probs=118.3
Q ss_pred ceEEeeCCCeEEEEeecC---CCCCCeEEEEECCEEecC------------------CCcEEEe-----eCCCEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPE---AAPKPKFVWKKDGNIIGS------------------GGRRKIF-----ENGNLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~---~~p~~~i~W~~~g~~~~~------------------~~~~~~~-----~~~~l~i~~v~ 150 (505)
..+.+.+|+++.|.|.+. +.+.+.+.|++++..... ..+..+. .+.+|.|.+++
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 92 (268)
T 3mj6_A 13 PQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQ 92 (268)
T ss_dssp CEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCC
T ss_pred CceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCC
Confidence 457789999999999987 667779999995532211 1333332 12679999999
Q ss_pred CCCCEEEEEEEEcCCCceeee--EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeec-CCCCeEEEEEeC-CEEecCC
Q psy14886 151 RDDSGIYSCTATNVHGMDESK--GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHN-GVRIGNM 226 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~~~~--~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~~w~~~-~~~~~~~ 226 (505)
.+|+|.|+|.+.+..+..... +.|.|. + ..+....+..|+.+.|.|.+.+. ..|...+.|+++ +......
T Consensus 93 ~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~----~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~ 166 (268)
T 3mj6_A 93 KADEGIYTCEIRLKNESMVMKKPVELWVL--P----EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEE 166 (268)
T ss_dssp GGGCEEEEEEEEETTCCCEEEEEEEEEEE--C----CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCE
T ss_pred HhHCEEEEEEEEecCCcceEEEEEEEEEe--c----cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcce
Confidence 999999999999876554333 445543 2 12346678899999999999432 223446779883 2111000
Q ss_pred C---------------CCcccC-----CeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcC
Q psy14886 227 D---------------LNELET-----PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 277 (505)
Q Consensus 227 ~---------------~~~~~~-----~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~ 277 (505)
. ...+.. .........|.|..+..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 167 TVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp EEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc
Confidence 0 000000 00112356899999999999999999999999888888888843
No 324
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.70 E-value=1.1e-16 Score=143.74 Aligned_cols=176 Identities=18% Similarity=0.268 Sum_probs=112.7
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc---C-C------CCCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN---S-E------TLPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~---~-~------~~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. . . .......+|+.+. ..+|.|.+++ .+|
T Consensus 34 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 112 (291)
T 2gki_A 34 VKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLT-SED 112 (291)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCC-GGG
T ss_pred ecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCC-HHH
Confidence 46899999999998766 5789999953 1110 0 0 0000012455442 2479999999 999
Q ss_pred CeEEEEEEEccc-Cc--eE--eeEEEEEEec---------------CCCccCCCCCceEEeeCCCeEEEEeecCCCCCC-
Q psy14886 61 PAMYQCRAKNQL-KT--RY--SSAQLRVLTL---------------KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKP- 119 (505)
Q Consensus 61 ~G~Y~C~~~~~~-~~--~~--~~~~l~v~~~---------------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~- 119 (505)
+|.|.|.+.+.. +. .. ..+.|.|... ++.+... +....+.+|++++|.|.+.+.+.+
T Consensus 113 sG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~ 190 (291)
T 2gki_A 113 SAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQS--PSSLAVSAGEKVTMSCKSSQSLFNS 190 (291)
T ss_dssp CEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECS--CSEEEEETTSCEEEEEEESSCCEET
T ss_pred CEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcC--CCEEEEcCCCcEEEEEEcCCccccc
Confidence 999999999864 21 11 2346666641 1112222 345678999999999999888765
Q ss_pred -----eEEEEEC--CEE---ec---------CCCcEEEeeC---CCEEEcCCCCCCCEEEEEEEEcCCCceeee-EEEEE
Q psy14886 120 -----KFVWKKD--GNI---IG---------SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIV 176 (505)
Q Consensus 120 -----~i~W~~~--g~~---~~---------~~~~~~~~~~---~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v 176 (505)
.+.|+++ |.. +. ...++..... .+|.|.+++.+|+|.|+|.+.+.....-.. ..|.|
T Consensus 191 ~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v 270 (291)
T 2gki_A 191 RTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEI 270 (291)
T ss_dssp TTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCEEEEE
Confidence 8999995 221 11 0234443322 259999999999999999999854322222 34555
Q ss_pred EeC
Q psy14886 177 LHG 179 (505)
Q Consensus 177 ~~~ 179 (505)
...
T Consensus 271 ~~~ 273 (291)
T 2gki_A 271 KHH 273 (291)
T ss_dssp ECC
T ss_pred Eee
Confidence 443
No 325
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.70 E-value=9.4e-18 Score=143.26 Aligned_cols=164 Identities=16% Similarity=0.200 Sum_probs=107.4
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc----CCC-----CCCCCCCcEEEEC------CeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN----SET-----LPLEDQDRYFIQD------NVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~----~~~-----~~~~~~~~~~~~~------~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. ... ......+|+.+.. .+|.|.+++ .+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~D~ 90 (210)
T 3d9a_H 12 VKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT-TEDT 90 (210)
T ss_dssp ECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC-GGGC
T ss_pred ecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC-cccC
Confidence 46899999999998865 4899999952 2111 000 0001235666531 389999999 9999
Q ss_pred eEEEEEEEcccCceEeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecC--CC
Q psy14886 62 AMYQCRAKNQLKTRYSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGS--GG 134 (505)
Q Consensus 62 G~Y~C~~~~~~~~~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~--~~ 134 (505)
|.|+|.+.+.. .....+.|.|... +|.+...+. ...+.+|+.++|.|.+.+. |.+ .+.|++++..+.. ..
T Consensus 91 G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~ 167 (210)
T 3d9a_H 91 ATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAP--GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFP 167 (210)
T ss_dssp EEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECC--TTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC
T ss_pred EEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecC--CcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcC
Confidence 99999998753 1122356666531 233322221 1225689999999999887 877 9999998875321 11
Q ss_pred cEE----EeeCCCEEEcCCCCCCCEEEEEEEEcCCCcee
Q psy14886 135 RRK----IFENGNLLISPVSRDDSGIYSCTATNVHGMDE 169 (505)
Q Consensus 135 ~~~----~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~ 169 (505)
... ......|.|.++..+| |.|+|.|.|..|...
T Consensus 168 ~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 205 (210)
T 3d9a_H 168 AVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK 205 (210)
T ss_dssp CEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEE
T ss_pred CccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 111 1112358888888767 999999999877654
No 326
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.70 E-value=1.1e-16 Score=137.46 Aligned_cols=172 Identities=16% Similarity=0.228 Sum_probs=111.4
Q ss_pred eEEeeCCCeEEEEeecCCC-CCCeEEEEECC---EE------------ec---CCCcEEEee---CCCEEEcCCCCCCCE
Q psy14886 98 ETYAGEGGNVTIFCNPEAA-PKPKFVWKKDG---NI------------IG---SGGRRKIFE---NGNLLISPVSRDDSG 155 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~-p~~~i~W~~~g---~~------------~~---~~~~~~~~~---~~~l~i~~v~~~d~G 155 (505)
.+.+.+|++++|.|.+.+. |.+.+.|++.. .. .. ...++.+.. +.+|.|.+++.+|+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 5678999999999999998 88899999821 10 00 012443322 235999999999999
Q ss_pred EEEEEEEcCCC-----ceeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC
Q psy14886 156 IYSCTATNVHG-----MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 156 ~y~C~~~~~~g-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~ 226 (505)
.|.|.+.+..| .....+.|.|.. +|.+... +.......|+.+.|.|.+.+..++.+.+.|+++|..+...
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~-~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 167 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVF-PPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQG 167 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEE-CCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC---
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEee-CCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCc
Confidence 99999998876 223346777764 2333222 2223334567899999999854444578899999888642
Q ss_pred CCCc--ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE
Q psy14886 227 DLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270 (505)
Q Consensus 227 ~~~~--~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~ 270 (505)
.... ..........+.|.|.....+|.|.|+|.|.|..+.....
T Consensus 168 ~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 168 VDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp -----------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred eecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 1100 0000111112347777777778999999999988765544
No 327
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.70 E-value=5e-18 Score=146.59 Aligned_cols=173 Identities=14% Similarity=0.226 Sum_probs=108.3
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc------C-CC---CCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN------S-ET---LPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~------~-~~---~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ ...+.|+|++ ..+. . .. ......+|+.+. ..+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 90 (227)
T 1mju_H 12 VKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLT-SDD 90 (227)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred EcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCC-ccc
Confidence 46899999999998866 6889999953 2110 0 00 000013577653 2489999999 999
Q ss_pred CeEEEEEEEcccCceE-eeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecC--
Q psy14886 61 PAMYQCRAKNQLKTRY-SSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGS-- 132 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~~-~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~-- 132 (505)
+|.|.|.+.+...... ..+.|.|... +|.+.... +...+.+|+.++|.|.+.|. |.+ .+.|++++..+..
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~ 168 (227)
T 1mju_H 91 SAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLA--PVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT 168 (227)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEEC--CCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred CEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEec--CCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEE
Confidence 9999999987532211 2356777641 23332211 11235689999999999885 766 9999998875421
Q ss_pred CCcE----EEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEEE
Q psy14886 133 GGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 177 (505)
Q Consensus 133 ~~~~----~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v~ 177 (505)
.... .......|.|..+..+| |.|+|.|.|..+.......+.+.
T Consensus 169 ~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 169 FPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp CCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred CCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 1111 11123358898888878 99999999976665555555443
No 328
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.70 E-value=3.4e-16 Score=132.59 Aligned_cols=165 Identities=14% Similarity=0.225 Sum_probs=110.0
Q ss_pred EEeeCCCeEEEEeecCC----CCCCeEEEEECCEEecC------------CCcEEE--eeCCCEEEcCCCCCCCEEEEEE
Q psy14886 99 TYAGEGGNVTIFCNPEA----APKPKFVWKKDGNIIGS------------GGRRKI--FENGNLLISPVSRDDSGIYSCT 160 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~----~p~~~i~W~~~g~~~~~------------~~~~~~--~~~~~l~i~~v~~~d~G~y~C~ 160 (505)
+.+.+|+++.|.|.+.+ .|.+.+.|++++..+.. ..+..+ ..+.+|.|.+++.+|+|.|+|.
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECV 83 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEE
Confidence 56889999999999864 35679999999987620 122222 1235799999999999999999
Q ss_pred EEcCCCcee-----eeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEee-ecCCCCeEEEEEeCCEEecCCCCCcccCC
Q psy14886 161 ATNVHGMDE-----SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELETP 234 (505)
Q Consensus 161 ~~~~~g~~~-----~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 234 (505)
+.+..|... ..+.|.|...+...... ......|+.+.|.|.+. +.|.| .+.|+++|..+.... .
T Consensus 84 ~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~--~~~~~~g~~~~l~C~~~~g~P~p--~i~W~k~g~~l~~~~------~ 153 (201)
T 1dr9_A 84 VLKYEKDAFKREHLAEVTLSVKADFPTPSIS--DFEIPTSNIRRIICSTSGGFPEP--HLSWLENGEELNAIN------T 153 (201)
T ss_dssp EEECCTTSCEEEEEEEEEEEEECCCCCCEEE--EEECSSTTEEEEEEEEEEESSCE--EEEEEESSCEECCSE------E
T ss_pred EEcCCCCccccccccEEEEEEcCCCCCCceE--eccCCCCCeEEEEEecCCccCCC--EEEEEECCEECcccc------c
Confidence 999776543 34667765542211000 01113477899999995 76665 677999988876431 1
Q ss_pred eeeec-C-CeEE---EecCCCCCCEEEEEEEEecCCcEEEEEEE
Q psy14886 235 NINID-G-GLLE---ITNASFADAGEYECVVKSTVGKISTKTTV 273 (505)
Q Consensus 235 ~~~~~-~-~~l~---i~~~~~~~~g~y~C~~~n~~g~~~~~~~l 273 (505)
..... . ..+. +..+...|.|.|+|.|.|..|..+..+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 154 TVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred eEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 11111 1 2222 23344578999999999999988776654
No 329
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=121.89 Aligned_cols=110 Identities=23% Similarity=0.340 Sum_probs=89.3
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCC--cEEEEeeecCce
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE--FQSETLKEYGNV 445 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~ 445 (505)
|.|++|... .+.|.+..|+.+|.++++...+.++|.|.|+++. . +.|++|+|+|+..+... +.......
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~--~--g~i~~Y~v~~~~~~~~~~~~~~~~~~~---- 71 (119)
T 2ee2_A 1 GSSGSSGVA-VINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVL--E--KIVESYQIRYWAAHDKEEAANRVQVTS---- 71 (119)
T ss_dssp CCCCCSSCC-CCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCS--C--TTCCEEEEEEEESSSCGGGCEEEEEET----
T ss_pred CCCCCCCCE-EEECCCcCCCCCCCcEEEEEccCCEEEEEecCCC--C--CccceEEEEEEECCCcccCcEEEEcCC----
Confidence 567777754 7888889999899999999888999999999843 3 88999999999876332 33222222
Q ss_pred eeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 446 ~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
....+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ee2_A 72 QEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKK 112 (119)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred CEeEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 23578899999999999999999999999999999998863
No 330
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.70 E-value=1.1e-16 Score=121.28 Aligned_cols=100 Identities=17% Similarity=0.267 Sum_probs=83.1
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC---CcEEEEeeecCceeeEEEEcCCcccee
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---EFQSETLKEYGNVGIAVVRIPSEFYYT 459 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~L~p~~ 459 (505)
+..|+.+|.++.+...+.++|.|.|++++....++.|++|+|+|+..+.. .|....+.. ....+.|.+|.|++
T Consensus 5 ~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p~t 80 (114)
T 1x4y_A 5 SSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEG----DRYWHSISHLQPET 80 (114)
T ss_dssp CCSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEET----TCCEEEECSCCTTC
T ss_pred ccCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCC----cEeEEEcCCCCCCC
Confidence 56788899999999999999999999965567899999999999987643 343222222 23568999999999
Q ss_pred eEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 460 EYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 460 ~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 81 ~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 107 (114)
T 1x4y_A 81 SYDIKMQCFNEGGESEFSNVMICETKA 107 (114)
T ss_dssp EEEEEEEEECTTCCCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcCCEEEEeCC
Confidence 999999999999999999999998864
No 331
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.70 E-value=2.6e-16 Score=134.90 Aligned_cols=170 Identities=15% Similarity=0.158 Sum_probs=110.7
Q ss_pred ceEEeeCCCeEEEEeec-CCCC-CCeEEEEECC--EEe------------cCCCcEEEeeCC---CEEEcCCCCCCCEEE
Q psy14886 97 SETYAGEGGNVTIFCNP-EAAP-KPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIY 157 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~-~~~p-~~~i~W~~~g--~~~------------~~~~~~~~~~~~---~l~i~~v~~~d~G~y 157 (505)
....+.+|++++|.|.+ .+.+ .+.+.|++++ ..+ ....++.....+ +|.|.+++.+|+|.|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (216)
T 2xzc_L 8 PSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADY 87 (216)
T ss_dssp SEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEE
Confidence 45779999999999995 4443 5799999843 211 012344443333 699999999999999
Q ss_pred EEEEEcCCC--ceeeeEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCC---
Q psy14886 158 SCTATNVHG--MDESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN--- 229 (505)
Q Consensus 158 ~C~~~~~~g--~~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~--- 229 (505)
.|.+.+..+ .......|.|.. +|.+....+. .....|+.+.|.|.+.+.+++.+.+.|+++|..+......
T Consensus 88 ~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 166 (216)
T 2xzc_L 88 YCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPS-DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT 166 (216)
T ss_dssp EEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred EEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCC-hhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecC
Confidence 999999876 122235666643 2333322222 1223578999999999865444578899999887653000
Q ss_pred -cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 230 -ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 230 -~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
...........+.|.|.....+|.|.|+|.|.|.....
T Consensus 167 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 167 EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred cccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 00000111112368888888899999999999977543
No 332
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.70 E-value=9e-17 Score=138.01 Aligned_cols=165 Identities=18% Similarity=0.245 Sum_probs=110.0
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EE---CcCCC-------CCCCCCCcEEEEC------CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--EL---LNSET-------LPLEDQDRYFIQD------NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~---l~~~~-------~~~~~~~~~~~~~------~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ ...+.|+|.+ .. +.... ......+|+.+.. .+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 90 (220)
T 2fbj_H 12 VQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR-SED 90 (220)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC-GGG
T ss_pred ecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC-hhh
Confidence 46899999999998765 5789999953 11 11000 0011246776642 389999999 999
Q ss_pred CeEEEEEEEcccCc---eEeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CC--CeEEEEECCEEec
Q psy14886 61 PAMYQCRAKNQLKT---RYSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK--PKFVWKKDGNIIG 131 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~---~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~--~~i~W~~~g~~~~ 131 (505)
+|.|.|.+.+..+. ....+.|.|... +|.+...+ ...+.+|+.++|.|.+.+. |. +.+.|++++..+.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~---~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~ 167 (220)
T 2fbj_H 91 TALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT---LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDIT 167 (220)
T ss_dssp CEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC---CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCE
T ss_pred CEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee---cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecc
Confidence 99999999876442 112456777642 23332222 1125689999999999886 66 6999999887542
Q ss_pred C-CCcEEEeeCC------CEEEcCCCCCCCEEEEEEEEcCCCcee
Q psy14886 132 S-GGRRKIFENG------NLLISPVSRDDSGIYSCTATNVHGMDE 169 (505)
Q Consensus 132 ~-~~~~~~~~~~------~l~i~~v~~~d~G~y~C~~~~~~g~~~ 169 (505)
. ........++ .|.|.++...|.|.|+|.|.|..+...
T Consensus 168 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 168 TVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred eEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 1 0011111122 388888888999999999999887654
No 333
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.70 E-value=1.9e-16 Score=135.51 Aligned_cols=169 Identities=18% Similarity=0.221 Sum_probs=112.7
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC---EE--e---------cCCCcEEEeeC---CCEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG---NI--I---------GSGGRRKIFEN---GNLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g---~~--~---------~~~~~~~~~~~---~~l~i~~v~~~d~G~y~C 159 (505)
..+.+.+|++++|.|.+.+.|.+.+.|++.+ .. + ....++..... .+|.|.+++.+|+|.|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3r06_A 9 SSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYC 88 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred CEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEE
Confidence 4567899999999999999988899999832 11 0 01234444322 269999999999999999
Q ss_pred EEEcCCCceee-eEEEEEE---eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCC-C---Ccc
Q psy14886 160 TATNVHGMDES-KGRLIVL---HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD-L---NEL 231 (505)
Q Consensus 160 ~~~~~~g~~~~-~~~l~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~-~---~~~ 231 (505)
.+.+..+.... ...|.|. .+|.+... +.......|+.+.|.|.+.+.+++.+.+.|+++|..+.... . ...
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 167 (213)
T 3r06_A 89 QQYYNYPWTFGPGTKLEIKRADAKPTVSIF-PPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQD 167 (213)
T ss_dssp EECSSSSCEECCCEEEEECCCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCC
T ss_pred ecccCCceEEcCCceEEEeccCCCceeeee-CCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCcee
Confidence 99887653333 3566662 23333322 22333345677999999999876567889999999886521 0 000
Q ss_pred cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 232 ~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.........+.|.+.....+|.|.|+|.|.|....
T Consensus 168 ~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 168 SKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred CCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 00111111235777777778899999999997644
No 334
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.69 E-value=3.3e-17 Score=120.63 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=79.2
Q ss_pred CCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEE
Q psy14886 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465 (505)
Q Consensus 386 p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v 465 (505)
|+++|.++.+.. ..+++.|+|++ +.+++++|++|.|+|+. +...|......... ..+.+.+.+|.+++.|.|||
T Consensus 7 p~~pP~~l~v~~-~~~sv~L~W~p--P~~~~~~I~gY~vey~~-~~~~W~~~~~~~~~--~~t~~~v~~L~pg~~Y~FRV 80 (108)
T 1v5j_A 7 GLSPPRGLVAVR-TPRGVLLHWDP--PELVPKRLDGYVLEGRQ-GSQGWEVLDPAVAG--TETELLVPGLIKDVLYEFRL 80 (108)
T ss_dssp CCCCCEEEEEEE-CSSSEEEEEEC--CSCCSSCCCBEEEEEEE-TTCCCEEEEEEECS--SCCEEECCCCCTTSCEECCB
T ss_pred CCCCCcceEEEE-eCCEEEEEECC--CCCCCCCCcEEEEEEEe-CCCCcEEeeeecCC--CcCEEEeCCCCCCCEEEEEE
Confidence 348999999975 46789999999 45688999999999999 55779865543222 34678899999999999999
Q ss_pred EEecCCCCCCCCceEEEeecc
Q psy14886 466 QAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 466 ~a~n~~G~g~~s~~~~~~t~p 486 (505)
.|+|.+|.|++|+.+.+.|..
T Consensus 81 ~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 81 VAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp EEEETTEEEEECSCCCCCCSS
T ss_pred EEEcCCCCcCCCCCEEEEeCC
Confidence 999999999999999888864
No 335
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.69 E-value=3e-18 Score=148.99 Aligned_cols=163 Identities=22% Similarity=0.323 Sum_probs=89.4
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EEC---cCC--CCCCCCCCcEEE----ECCeEEEEcCCCCCCCeEEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELL---NSE--TLPLEDQDRYFI----QDNVLTIRYLNPERDPAMYQCRAK 69 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l---~~~--~~~~~~~~~~~~----~~~~L~i~~~~~~~d~G~Y~C~~~ 69 (505)
+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ... ........|+.. ...+|.|.+++ .+|+|.|+|.+.
T Consensus 35 v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~~ 113 (233)
T 3bqu_C 35 MSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENML-SEDVADYYCLQS 113 (233)
T ss_dssp ------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC------CCCCSEEEEEEC
T ss_pred EecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCC-HHHCEEEEEEEe
Confidence 468999999999988777789999953 211 000 000001223322 23489999999 999999999998
Q ss_pred cccCceEe-eEEEEEEe--cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecCCCcEE--E--ee
Q psy14886 70 NQLKTRYS-SAQLRVLT--LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGSGGRRK--I--FE 140 (505)
Q Consensus 70 ~~~~~~~~-~~~l~v~~--~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~~~~~~--~--~~ 140 (505)
+..+.... ...|.|.. .+|.+...+.. ..+.+|+.++|.|.+.+. |.+ .+.|+++|..+..+.... . ..
T Consensus 114 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~ 191 (233)
T 3bqu_C 114 DNLPYTFGGGTNLEIKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSK 191 (233)
T ss_dssp SSSSCCBCCCCBC---CCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTT
T ss_pred cCCceeecCCEEEEEeCCCCCCEEEEeCCC--HHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCC
Confidence 76553322 23455543 23444332211 123469999999999885 443 799999998775431111 0 01
Q ss_pred C------CCEEEcCCCCCCCEEEEEEEEcCCC
Q psy14886 141 N------GNLLISPVSRDDSGIYSCTATNVHG 166 (505)
Q Consensus 141 ~------~~l~i~~v~~~d~G~y~C~~~~~~g 166 (505)
+ ..|.|..+..+|+|.|+|.|.|...
T Consensus 192 ~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 192 DSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp TCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 1 2478888888999999999998644
No 336
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.69 E-value=1.6e-16 Score=137.24 Aligned_cols=178 Identities=15% Similarity=0.178 Sum_probs=111.8
Q ss_pred ceEEeeCCCeEEEEeecCCCCCC---eEEEEECCEEecC----------------CCcEEE----------eeCCCEEEc
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGS----------------GGRRKI----------FENGNLLIS 147 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~---~i~W~~~g~~~~~----------------~~~~~~----------~~~~~l~i~ 147 (505)
+.+.+..|++++|.|.+.+.+.+ .|.|+|++..+.. ..+... ..+.+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 44678899999999999887665 4899997643210 111111 123469999
Q ss_pred CCCCCCCEEEEEEEEcCCCceeee-EEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC
Q psy14886 148 PVSRDDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~~g~~~~~-~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~ 226 (505)
+++.+|+|.|+|.+.+..+..... ..+.+..+|..... +.......+..+.+.|.+.+..++ ..+.|.+++......
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~c~~~~~~P~-~~~~w~~~~~~~~~~ 166 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAE-AQEVTIGPQSVAVARCVSTGGRPP-ARITWISSLGGEAKD 166 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE-ECCBCCSSSCEEEEEEEEEEEBSC-CEEEEECSSCCEEEE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeec-ccceeecceeeeeeeeeecCCCCC-CEEEEEECCccccCC
Confidence 999999999999999887766555 34445444444333 333344556667777776654332 356787765443221
Q ss_pred CCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE--EEEEEEEc
Q psy14886 227 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS--TKTTVIVE 276 (505)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~--~~~~l~v~ 276 (505)
..............+.|.|..+..+|+|.|+|.|.|..|... .+++|.|+
T Consensus 167 ~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 167 TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 100000011111124689999999999999999999888654 44555443
No 337
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.69 E-value=2e-16 Score=138.74 Aligned_cols=172 Identities=18% Similarity=0.221 Sum_probs=115.4
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEE----------------CCEEecCC---CcEEEee----CCCEEEcCCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKK----------------DGNIIGSG---GRRKIFE----NGNLLISPVSRDD 153 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~----------------~g~~~~~~---~~~~~~~----~~~l~i~~v~~~d 153 (505)
..+.+.+|++++|.|.+.+.+.+.+.|++ ++...... .++.+.. ..+|.|.+++.+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 88 (246)
T 4dzb_B 9 SWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPED 88 (246)
T ss_dssp SEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGG
T ss_pred cEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHH
Confidence 44678999999999999998888999998 33322221 3444432 1269999999999
Q ss_pred CEEEEEEEEcCCC----ceeeeEEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEe
Q psy14886 154 SGIYSCTATNVHG----MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223 (505)
Q Consensus 154 ~G~y~C~~~~~~g----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~ 223 (505)
+|.|.|.+.+..+ .......|.|.. +|.+....+....+..|+.+.|.|.+.+.+++.+.+.|+++|..+
T Consensus 89 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l 168 (246)
T 4dzb_B 89 SSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 168 (246)
T ss_dssp CEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEEC
Confidence 9999999987543 222335677764 333333333333445689999999999987666788999999888
Q ss_pred cCCCCCccc--------CCeeeecCCeEEEecCCCCC-CEEEEEEEEecCCcEE
Q psy14886 224 GNMDLNELE--------TPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKIS 268 (505)
Q Consensus 224 ~~~~~~~~~--------~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~n~~g~~~ 268 (505)
......... ........+.|.|.....+| .|.|+|.|.|......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 169 HSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp CTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred CCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 653211000 00111112347777776677 9999999998765533
No 338
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.69 E-value=1.2e-15 Score=141.74 Aligned_cols=224 Identities=11% Similarity=-0.018 Sum_probs=117.2
Q ss_pred EEecCCCCCCEEEEEEEEe------cCCcEEE-EEEEEE----cCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceE
Q psy14886 244 EITNASFADAGEYECVVKS------TVGKIST-KTTVIV----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 312 (505)
Q Consensus 244 ~i~~~~~~~~g~y~C~~~n------~~g~~~~-~~~l~v----~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y 312 (505)
....+.......|+..|.| ..|..+. +..+.. ..+|.+|.++.+......++.++|+++.+. .....|
T Consensus 91 ~~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~p~~~~-~~~~~Y 169 (380)
T 3lb6_C 91 YKDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGV-LLDTNY 169 (380)
T ss_dssp EEEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEECC-------CCE
T ss_pred EEEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEcCCCCC-CCCccE
Confidence 3344555667777888773 3343222 212221 245678889999999999999999987654 345789
Q ss_pred EEEEEeCCCCCeEEeeeccccceeeeecCce-eeEEe-eeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCC
Q psy14886 313 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRK-EASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 390 (505)
Q Consensus 313 ~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~-~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P 390 (505)
.+.|+..+...+..+..... ..+.. ...+. .++.+++.|.|+|.|.|..|.+..+.. .+.+....++.||
T Consensus 170 ~l~y~~~~~~~~~~C~~~~~------~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s~~~--~~~~~~~v~p~pP 241 (380)
T 3lb6_C 170 NLFYWYEGLDHALQCVDYIK------ADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIRSSYF--TFQLQNIVKPLPP 241 (380)
T ss_dssp EEEEECTTCSSCEECSEEEE------C--CEEEEECCCCTTCSSSCEEEEEEEC-----CCCEEE--EECGGGSCCCCCC
T ss_pred EEEEEECCCCccccCCCccc------cCCceEEEEeCCCcccceeEEEEEEEEEcCCeeeccccE--EEcHHHcccCCCC
Confidence 99999876555544422111 00111 12222 136788999999999999988754322 4556666778899
Q ss_pred ceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCC-ccceeeEEEEEEEec
Q psy14886 391 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS-EFYYTEYEVKVQAIN 469 (505)
Q Consensus 391 ~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~p~~~Y~~~v~a~n 469 (505)
.++.+...+.+++.|+|++|.. ...+.+++|.|+|+..+ ..|...... + .+.|.+ |.|++.|.|+|+|..
T Consensus 242 ~~l~v~~~~~~~l~l~W~~P~~-~~~~~~l~Yev~y~~~~-~~w~~~~~~---~----~~~l~~~L~p~t~Y~~qVRa~~ 312 (380)
T 3lb6_C 242 VYLTFTRESSCEIKLKWSIPLG-PIPARCFDYEIEIREDD-TTLVTATVE---N----ETYTLKTTNETRQLCFVVRSKV 312 (380)
T ss_dssp EEEEEC-------CEEEECCSS-SCCSTTEEEEECC---------CCEES---S----SCC------------CCEEEEE
T ss_pred ceEEEEEcCCCeEEEEECCCCC-CCCcceEEEEEEEEeCC-CCceEeccc---c----eEEEeCccCCCcEEEEEEEEEE
Confidence 9999987778899999998532 23357899999999864 456543321 1 356788 999999999999994
Q ss_pred C-----CC-CCCCCceEEEeec
Q psy14886 470 D-----VG-PGPESEVVTIWHD 485 (505)
Q Consensus 470 ~-----~G-~g~~s~~~~~~t~ 485 (505)
. .| .|++|+.+.+.|.
T Consensus 313 ~~~~~~~g~WSeWS~~~~~~t~ 334 (380)
T 3lb6_C 313 NIYCSDDGIWSEWSDKQCWEGE 334 (380)
T ss_dssp CTTTCSSCCCCCCCCC------
T ss_pred cccCCCCCCCCCCCCCEEEeCC
Confidence 3 34 2777887777775
No 339
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.69 E-value=1e-16 Score=148.00 Aligned_cols=170 Identities=16% Similarity=0.296 Sum_probs=111.5
Q ss_pred eEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEec-----------------CCCcEEEeeC-----CCEEEcCCCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG-----------------SGGRRKIFEN-----GNLLISPVSR 151 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~~-----------------~~~~~~~~~~-----~~l~i~~v~~ 151 (505)
...+.+|++++|.|.+.+.+ .+.+.|+++ |..+. ...++.+..+ .+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (344)
T 1za6_B 9 AEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRS 88 (344)
T ss_dssp CEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 35689999999999998763 579999986 33220 1245555432 3699999999
Q ss_pred CCCEEEEEEEEcCCCceeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCC
Q psy14886 152 DDSGIYSCTATNVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 227 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~ 227 (505)
+|+|.|+|.+.+..+.....+.|.|.. +|.+... ++...+..|+.+.|.|.+.+.++....+.|++++..+....
T Consensus 89 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~ 167 (344)
T 1za6_B 89 EDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHT 167 (344)
T ss_dssp GGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEE-CCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEE
T ss_pred ccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEc-cccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeE
Confidence 999999999998654444556787763 2332222 22233468899999999998743224677999886532100
Q ss_pred CCc-ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEE
Q psy14886 228 LNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 269 (505)
Q Consensus 228 ~~~-~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~ 269 (505)
... ..........+.|.|..+..++ |.|+|.|.|..+....
T Consensus 168 ~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~ 209 (344)
T 1za6_B 168 FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 209 (344)
T ss_dssp CCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEE
T ss_pred CCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 000 0000111112468888887777 9999999999886543
No 340
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.69 E-value=2.1e-16 Score=138.94 Aligned_cols=169 Identities=17% Similarity=0.223 Sum_probs=112.6
Q ss_pred ceEEeeCCCeEEEEeecCCCC-----CCeEEEEECC--EEe------------cCCCcEEEeeCC---CEEEcCCCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-----KPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDS 154 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-----~~~i~W~~~g--~~~------------~~~~~~~~~~~~---~l~i~~v~~~d~ 154 (505)
..+.+.+|++++|.|.+.+.+ .+.+.|++++ ..+ ....++.....+ +|.|.+++.+|+
T Consensus 42 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 121 (252)
T 3bkj_L 42 LSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDL 121 (252)
T ss_dssp SEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred ceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccC
Confidence 456789999999999998887 5899999853 111 012344444333 699999999999
Q ss_pred EEEEEEEEcCCCcee-eeEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCC-
Q psy14886 155 GIYSCTATNVHGMDE-SKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN- 229 (505)
Q Consensus 155 G~y~C~~~~~~g~~~-~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~- 229 (505)
|.|.|.+.+..+... ....|.|.. +|.+.... ....+..|+.+.|.|.+.+.+++.+.+.|+++|..+......
T Consensus 122 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~-~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 200 (252)
T 3bkj_L 122 GVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFP-PSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS 200 (252)
T ss_dssp EEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEEC-CCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEE
T ss_pred EEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeC-CChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeee
Confidence 999999998765332 225666654 23332222 222233688999999999865545678899999887543000
Q ss_pred ---cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 230 ---ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 230 ---~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
...........+.|.|..+..+|.|.|+|.|.|....
T Consensus 201 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 201 WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred cCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 0000001111245888888888999999999997654
No 341
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.69 E-value=1.4e-16 Score=137.42 Aligned_cols=183 Identities=16% Similarity=0.235 Sum_probs=113.5
Q ss_pred ceEEeeCCCeEEEEeecCCCC--CCeEEEEECC--EE---e---c-----------CCCcEEEee-----CCCEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--NI---I---G-----------SGGRRKIFE-----NGNLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g--~~---~---~-----------~~~~~~~~~-----~~~l~i~~v~ 150 (505)
....+.+|++++|.|.+.+.+ .+.+.|++++ .. + . ...++.+.. +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (227)
T 1mju_H 8 GAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLT 87 (227)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCC
Confidence 346789999999999998776 5799999843 21 1 0 024555543 2369999999
Q ss_pred CCCCEEEEEEEEcCCCce-eeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecC
Q psy14886 151 RDDSGIYSCTATNVHGMD-ESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 225 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~-~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~ 225 (505)
.+|+|.|.|.+.+..+.. .....|.|.. .|.+.... ....+..|+.++|.|.+.+..+..+.+.|++++..+..
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~ 166 (227)
T 1mju_H 88 SDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLA-PVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGV 166 (227)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEEC-CCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTE
T ss_pred cccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEec-CCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCc
Confidence 999999999999753221 1235677754 23333222 22345679999999999986333357889998765321
Q ss_pred CCCC-cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCC
Q psy14886 226 MDLN-ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 282 (505)
Q Consensus 226 ~~~~-~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p 282 (505)
.... .... ......+.|.|.....++ |.|+|.|.|..+.......+.+..+|..|
T Consensus 167 ~~~~~~~~~-g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 167 HTFPAVLQS-DLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 222 (227)
T ss_dssp EECCCEEET-TEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC----
T ss_pred EECCceecC-CeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCC
Confidence 0000 0000 111223568888888777 99999999988777666676666666543
No 342
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.69 E-value=6.9e-18 Score=144.73 Aligned_cols=162 Identities=15% Similarity=0.215 Sum_probs=104.3
Q ss_pred CCCCCceEEEEEEecc---C-CCeEEEEECCEECcCCCC---CCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFGV---P-DVTYSWFRNGELLNSETL---PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~---p-~~~~~W~~~~~~l~~~~~---~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
+.+|++++|.|.+.+. | .+.|.|+|++..+..... .....+++. ..++|.|.+++ .+|+|.|+|.+.|..+
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~~~-~~D~g~Y~C~~~~~~~ 100 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIR-VVSTLPIQHQD-WMSGKEFKCKVNNKDL 100 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEE-EEEEEECCHHH-HHTTCCEEEEEEETTC
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEE-EEEEEEEcHHH-cCCCCeEEEEEECCcC
Confidence 3589999999999886 4 379999999987653210 000122332 23579999999 9999999999998765
Q ss_pred ceEeeEEE----EEEecCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEecCCCc--EEEeeCCCEE
Q psy14886 74 TRYSSAQL----RVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSGGR--RKIFENGNLL 145 (505)
Q Consensus 74 ~~~~~~~l----~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~~~~~--~~~~~~~~l~ 145 (505)
.......+ .+. .+|.+.+.+.... ..+|+.++|.|.+.| +|.+ .|.|+++|..+..... .....++++.
T Consensus 101 ~~~~~~~v~~~~~~~-~~P~v~~~~~~~~--~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~ 177 (218)
T 2rgs_A 101 PSPIERTISKIKGLV-RAPQVYILPPPAE--QLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYF 177 (218)
T ss_dssp SSCEEEEECCCCCCC-BCCEEEEECCCGG--GTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEE
T ss_pred CCcceEEEeecCCCC-CCCEEEEECCChH--HhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEE
Confidence 43111122 122 3454433332211 235999999999998 5665 9999999998743211 1123344433
Q ss_pred ------EcCCCCCCCEEEEEEEEcCCCc
Q psy14886 146 ------ISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 146 ------i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
+......|.|.|+|.|.|....
T Consensus 178 ~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 178 IYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred EEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 3333344689999999987644
No 343
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.69 E-value=1.5e-16 Score=122.59 Aligned_cols=109 Identities=19% Similarity=0.212 Sum_probs=88.4
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEE-EeeecCceeeEEEEcCCcc
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE-TLKEYGNVGIAVVRIPSEF 456 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~L~ 456 (505)
.+.|.+..|+.+|.++.+...+.++|.|.|+++..+..+|.|++|+|+|+..+...|... ..........+.+.|.+|.
T Consensus 7 ~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~ 86 (122)
T 1va9_A 7 GISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLK 86 (122)
T ss_dssp SSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCC
T ss_pred EEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCC
Confidence 678888999889999999988999999999996544488999999999999874433211 1111112245788999999
Q ss_pred ceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 457 YYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 457 p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
|++.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 87 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 116 (122)
T 1va9_A 87 KFAQYGVVVQAFNRAGTGPSSSEINATTLE 116 (122)
T ss_dssp SSCCEEEEEEEEETTEECCCCCCEECCCCS
T ss_pred CCCEEEEEEEEEcCCCCCCCccCEEEEeCC
Confidence 999999999999999999999999988864
No 344
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.69 E-value=5.7e-16 Score=136.79 Aligned_cols=161 Identities=20% Similarity=0.203 Sum_probs=102.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEECc---CCC-------C-CCCCCCcEEE-----ECCeEEEEcCCCCCCCe
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GELLN---SET-------L-PLEDQDRYFI-----QDNVLTIRYLNPERDPA 62 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~---~~~-------~-~~~~~~~~~~-----~~~~L~i~~~~~~~d~G 62 (505)
+.+|++++|.|.+.+.+.+.+.|+|. +.... ... . ......++.. ...+|.|.+++ .+|+|
T Consensus 14 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~-~~DsG 92 (259)
T 3omz_A 14 RQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLI-ENDSG 92 (259)
T ss_dssp EETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCC-GGGCE
T ss_pred ecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCC-cccCE
Confidence 35899999999999888889999992 11110 000 0 0001122222 23579999999 99999
Q ss_pred EEEEEEEcccCc---eEeeEEEEEEec----------------CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCCeEE
Q psy14886 63 MYQCRAKNQLKT---RYSSAQLRVLTL----------------KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKPKFV 122 (505)
Q Consensus 63 ~Y~C~~~~~~~~---~~~~~~l~v~~~----------------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~~i~ 122 (505)
.|.|.+.+..+. ......|.|... .+.+... +....+.+|++++|.|.+.+. +.+.+.
T Consensus 93 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~v~ 170 (259)
T 3omz_A 93 VYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQA--QSSVSMPVRKAVTLNCLYETSWWSYYIF 170 (259)
T ss_dssp EEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECC--CCCEEEETTCCEEECCEEECCCSSCEEE
T ss_pred EEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEe--CCEEEEcCCCCEEEEEECCCccCCceEE
Confidence 999999987652 223466777642 1222222 345778999999999998774 778999
Q ss_pred EEECC--EEec------------CCCcEEEee-----CCCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 123 WKKDG--NIIG------------SGGRRKIFE-----NGNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 123 W~~~g--~~~~------------~~~~~~~~~-----~~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
|++++ ..+. ...++.+.. ...|.|.+++.+|+|.|.|.+.+.
T Consensus 171 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 171 WYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp EEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred EeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 99843 1110 013343331 235999999999999999999853
No 345
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.69 E-value=5.1e-17 Score=140.47 Aligned_cols=166 Identities=18% Similarity=0.281 Sum_probs=107.2
Q ss_pred CCCCCceEEEEEEeccCC----CeEEEEEC--CEECc---CC------CCCCCCCCcEEEE------CCeEEEEcCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVPD----VTYSWFRN--GELLN---SE------TLPLEDQDRYFIQ------DNVLTIRYLNPER 59 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~----~~~~W~~~--~~~l~---~~------~~~~~~~~~~~~~------~~~L~i~~~~~~~ 59 (505)
+.+|++++|.|.+.+.|. +.+.|+|+ +..+. .. .......+|+.+. ..+|.|.+++ .+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~ 90 (228)
T 3bae_H 12 LKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVD-TA 90 (228)
T ss_dssp ECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCC-GG
T ss_pred ecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCC-cc
Confidence 468999999999988764 88999984 22211 00 0000124577653 2589999999 99
Q ss_pred CCeEEEEEEEcccC------c--eE-eeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEE
Q psy14886 60 DPAMYQCRAKNQLK------T--RY-SSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKK 125 (505)
Q Consensus 60 d~G~Y~C~~~~~~~------~--~~-~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~ 125 (505)
|+|.|.|.+.+..+ . .. ..+.|.|... +|.+.... +...+.+|+.++|.|.+.+. |.+ .+.|++
T Consensus 91 D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~--~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~ 168 (228)
T 3bae_H 91 DTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLA--PVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS 168 (228)
T ss_dssp GCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEEC--C-----CCSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred cCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEec--ccccccCCCCEEEEEEEccEeCCCEEEEEee
Confidence 99999999988654 1 11 2367777631 23332221 11235789999999999886 777 999999
Q ss_pred CCEEecCCCcEEE------eeCCCEEEcCCCCCCCEEEEEEEEcCCCceee
Q psy14886 126 DGNIIGSGGRRKI------FENGNLLISPVSRDDSGIYSCTATNVHGMDES 170 (505)
Q Consensus 126 ~g~~~~~~~~~~~------~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~ 170 (505)
++..+........ .....|.|.++..+| |.|+|.|.|..+....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 169 GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp GTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred CCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCE
Confidence 8865321111111 112358888888756 9999999998776543
No 346
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.68 E-value=1.2e-16 Score=141.26 Aligned_cols=162 Identities=19% Similarity=0.294 Sum_probs=108.5
Q ss_pred CCCCCceEEEEEEeccC------CCeEEEEEC--CEECc---CC--CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeE
Q psy14886 1 MDNQADLTWTCEAFGVP------DVTYSWFRN--GELLN---SE--TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAM 63 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p------~~~~~W~~~--~~~l~---~~--~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~ 63 (505)
|.+|++++|.|.+.+.+ .+.+.|+|+ +..+. .. .......+|+.+. ..+|.|.+++ .+|+|.
T Consensus 17 v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~-~~DsG~ 95 (264)
T 2gjj_A 17 VSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVK-AEDLAV 95 (264)
T ss_dssp EETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC-GGGCEE
T ss_pred ecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCC-HHHCEE
Confidence 46899999999998876 678999995 22111 00 0000123566653 2489999999 999999
Q ss_pred EEEEEEcccCceE-eeEEEEEEecC-----------------CCccCCCCCceEEeeCCCeEEEEeecCCCCC--CeEEE
Q psy14886 64 YQCRAKNQLKTRY-SSAQLRVLTLK-----------------PSFKKRPLESETYAGEGGNVTIFCNPEAAPK--PKFVW 123 (505)
Q Consensus 64 Y~C~~~~~~~~~~-~~~~l~v~~~~-----------------p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~--~~i~W 123 (505)
|.|.+.+..+... ..+.|.|...+ |.+.+... ....+.+|++++|.|.+.+.+. +.+.|
T Consensus 96 Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W 174 (264)
T 2gjj_A 96 YYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQS-GPEVVKTGASVKISCKASGYSFTGYFINW 174 (264)
T ss_dssp EEEEECSSSSCEECCCEEEEEECC-------------------CCEEEEC-CCEEECTTCCEEEEEEEESSCGGGSEEEE
T ss_pred EEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCC-CCEEEcCCCcEEEEEEEeCCccCCeEEEE
Confidence 9999987654322 24567777531 22222111 2246899999999999987763 79999
Q ss_pred EECC--E---Eec---C-----------CCcEEEee-----CCCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 124 KKDG--N---IIG---S-----------GGRRKIFE-----NGNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 124 ~~~g--~---~~~---~-----------~~~~~~~~-----~~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
+++. . .+. . ..++.+.. ..+|.|.+++.+|+|.|.|.+.|.
T Consensus 175 ~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 175 VKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 9852 2 121 0 23343321 236999999999999999999985
No 347
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=6.5e-17 Score=120.38 Aligned_cols=100 Identities=20% Similarity=0.288 Sum_probs=85.0
Q ss_pred CCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceee
Q psy14886 381 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460 (505)
Q Consensus 381 t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 460 (505)
+.+..|+.+|.++.+...+.++|.|.|++++....++.+.+|.|+|+..+...|..... ..+.+.|.+|.|++.
T Consensus 3 t~e~~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~------~~~~~~i~~L~p~t~ 76 (103)
T 2edy_A 3 SGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT------TDTRFTLTGLKPDTT 76 (103)
T ss_dssp TTCCCCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE------SSSCCEECSCCTTCC
T ss_pred CCCCCCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC------CcceEEEcCCCCCCE
Confidence 45778889999999998899999999999654678899999999999988655543321 235678999999999
Q ss_pred EEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 461 YEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 461 Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
|.|+|+|+|.+|.|++|+.+.+.|.|
T Consensus 77 Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 77 YDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp EEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEEEEEECCCCCCCCCCCEEEEecc
Confidence 99999999999999999999988876
No 348
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.68 E-value=4.5e-16 Score=138.86 Aligned_cols=161 Identities=19% Similarity=0.303 Sum_probs=106.5
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEECC--EECcC------C----CCCCCCCCcEEEE--C----CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRNG--ELLNS------E----TLPLEDQDRYFIQ--D----NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~~--~~l~~------~----~~~~~~~~~~~~~--~----~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+. +...+.|+|.. ..+.. . .......+|+.+. . .+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 90 (280)
T 3fku_X 12 KKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLR-SED 90 (280)
T ss_dssp ECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCC-STT
T ss_pred ECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCC-hhh
Confidence 4689999999999874 56889999842 11110 0 0000112456553 2 379999999 999
Q ss_pred CeEEEEEEEccc--------Cc-eEeeEEEEEEe--------------cCCCccCCCCCceEEeeCCCeEEEEeecCC-C
Q psy14886 61 PAMYQCRAKNQL--------KT-RYSSAQLRVLT--------------LKPSFKKRPLESETYAGEGGNVTIFCNPEA-A 116 (505)
Q Consensus 61 ~G~Y~C~~~~~~--------~~-~~~~~~l~v~~--------------~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~ 116 (505)
+|.|.|.+.+.. .. ......|.|.. .++.+... +. ..+.+|++++|.|.+.+ .
T Consensus 91 sG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~--p~-~~v~~G~~v~L~C~~~~~~ 167 (280)
T 3fku_X 91 TAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQP--PS-VSKGLRQTATLTCTGNSNN 167 (280)
T ss_dssp CEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCC--SE-EEECTTCCEEEEEECCCCC
T ss_pred CEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeC--Cc-EEEecCCCEEEEEEecCCC
Confidence 999999998761 11 22245666654 12233332 23 78999999999999988 4
Q ss_pred C-CCeEEEEEC--CEEec------------CCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 117 P-KPKFVWKKD--GNIIG------------SGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 117 p-~~~i~W~~~--g~~~~------------~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
+ .+.+.|++. +..+. ...++....++ .|.|.+++.+|+|.|.|.+.+..
T Consensus 168 ~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 168 VGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 3 479999872 22211 12344443333 39999999999999999999865
No 349
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.68 E-value=1.1e-16 Score=140.30 Aligned_cols=161 Identities=19% Similarity=0.295 Sum_probs=105.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEE--------------CCEECcCCCCCCCCCCcEEEEC-----CeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFR--------------NGELLNSETLPLEDQDRYFIQD-----NVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~--------------~~~~l~~~~~~~~~~~~~~~~~-----~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.| ..+.+.+.+.|+| ++..+..... ..+|+.+.. .+|.|.+++ .+|+
T Consensus 14 v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~sL~I~~v~-~~D~ 88 (245)
T 4ei6_B 14 IDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKL---FKDQFSVERPDGSYFTLKIQPTA-LEDS 88 (245)
T ss_dssp EETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTT---CCTTEEEECCTTSCEEEEECSCC-GGGC
T ss_pred ecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCC---ccCCEEEEeccCceEEEEECCCC-HhHC
Confidence 35899999999 5567888999999 2222211110 126676643 389999999 9999
Q ss_pred eEEEEEEEccc----CceEeeEEEEEEe-----cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEe
Q psy14886 62 AMYQCRAKNQL----KTRYSSAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNII 130 (505)
Q Consensus 62 G~Y~C~~~~~~----~~~~~~~~l~v~~-----~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~ 130 (505)
|.|+|.+.+.. ......+.|.|.. .+|.+.... +....+.+|+.++|.|.+.+. |.+ .+.|+++|..+
T Consensus 89 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l 167 (245)
T 4ei6_B 89 AVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167 (245)
T ss_dssp EEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred EEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeC-CCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEEC
Confidence 99999998532 1222345677763 233332221 111224569999999999884 544 89999999988
Q ss_pred cCCCcEEEe--------eCC------CEEEcCCCCCC-CEEEEEEEEcCCCc
Q psy14886 131 GSGGRRKIF--------ENG------NLLISPVSRDD-SGIYSCTATNVHGM 167 (505)
Q Consensus 131 ~~~~~~~~~--------~~~------~l~i~~v~~~d-~G~y~C~~~~~~g~ 167 (505)
......... .++ .|.|......| .|.|+|.|.+....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 168 HSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp CTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 653221110 122 27777777777 99999999986443
No 350
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.68 E-value=4.2e-16 Score=135.81 Aligned_cols=170 Identities=16% Similarity=0.197 Sum_probs=112.6
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC--EE---e---------cCCCcEEEee---CCCEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---I---------GSGGRRKIFE---NGNLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~~---~---------~~~~~~~~~~---~~~l~i~~v~~~d~G~y~C 159 (505)
....+.+|++++|.|.+.+.+.+.+.|++++ .. + ....++.... +.+|.|.+++.+|+|.|+|
T Consensus 32 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 111 (237)
T 3sob_L 32 SSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC 111 (237)
T ss_dssp SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEE
Confidence 4567899999999999998888899999832 11 0 1123444432 2359999999999999999
Q ss_pred EEEcCCCcee-eeEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCC----CCcc
Q psy14886 160 TATNVHGMDE-SKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD----LNEL 231 (505)
Q Consensus 160 ~~~~~~g~~~-~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~----~~~~ 231 (505)
.+.+..+... ....+.|.. +|.+... +.......|+.+.|.|.+.+.+++...+.|+++|..+.... ....
T Consensus 112 ~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 190 (237)
T 3sob_L 112 QQSYTTPPTFGQGTKVEIKRTVAAPSVFIF-PPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQD 190 (237)
T ss_dssp EECSSSSCEECCCEEEEEECCCBCCEEEEE-CCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCC
T ss_pred eeccCCceEEcCcEEEEEecCCCCCceEEe-CCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccc
Confidence 9988765332 235666643 2332222 22222335788999999998654356888999998876421 0000
Q ss_pred cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 232 ~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
.........+.|.+.....+|.|.|+|.|.|.....
T Consensus 191 ~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 226 (237)
T 3sob_L 191 SKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 226 (237)
T ss_dssp TTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred cCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCC
Confidence 011111123467788888889999999999987643
No 351
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.68 E-value=5e-17 Score=127.19 Aligned_cols=115 Identities=24% Similarity=0.235 Sum_probs=94.0
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceee
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 447 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 447 (505)
|.|.+|... .+.|.+..|..+|.++++...+.++|.|.|+++.....++.|++|+|+|+..+...|.... ......
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~---~~~~~~ 76 (132)
T 1x5h_A 1 GSSGSSGDV-AVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTET---LVSGTQ 76 (132)
T ss_dssp CCCCCCCCC-CCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEECC---BCCTTC
T ss_pred CcCCCCCCE-EEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEEE---EeCCCc
Confidence 567777765 7888888898899999999899999999999954444889999999999997744333211 112245
Q ss_pred EEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 448 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 448 ~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
+.+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.++|.+
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 77 LSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp CEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCS
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 688899999999999999999999999999999998865
No 352
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.68 E-value=3.7e-15 Score=123.06 Aligned_cols=153 Identities=21% Similarity=0.187 Sum_probs=107.9
Q ss_pred ceEEeeCCCeEEEEeecCC-CCCCeEEEEEC-CEEec------------CC--CcEEE-eeCCCEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEA-APKPKFVWKKD-GNIIG------------SG--GRRKI-FENGNLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~-~p~~~i~W~~~-g~~~~------------~~--~~~~~-~~~~~l~i~~v~~~d~G~y~C 159 (505)
..+.+.+|++++|.|.+.+ .+.+.|.|+++ +..+. .. .+..+ ..+++|.|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4467899999999999854 34679999994 32221 11 45555 456789999999999999999
Q ss_pred EEEcCCCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeec
Q psy14886 160 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 239 (505)
Q Consensus 160 ~~~~~~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 239 (505)
.+.+.. .....+.|.|..++.. +.+. ..+..+.|.|.+...|. ..+.|++++..+.. ..
T Consensus 87 ~v~~~~-~~~~~~~L~V~~~~~~-----P~i~-~~~~~v~L~C~~~~gp~--p~i~W~~~~~~l~~------------~~ 145 (180)
T 2dru_A 87 RMLHET-EDQWKITMEVYEMVSK-----PMIY-WECSNATLTCEVLEGTD--VELKLYQGKEHLRS------------LR 145 (180)
T ss_dssp EEESSS-EEEEEEEEEEECCCCC-----CEEE-EEGGGTEEEEECSSCTT--CEEEEEETTEEEEE------------ES
T ss_pred EEEcCC-eEEEEEEEEEECCCCC-----CEEE-ecCCCEEEEEEeCCCCC--CEEEEEECCeECcC------------CC
Confidence 998766 5556678888654321 1122 24567999999944454 46789999987641 12
Q ss_pred CCeEEEecCCCCCCEEEEEEEEecCCcEEEEEE
Q psy14886 240 GGLLEITNASFADAGEYECVVKSTVGKISTKTT 272 (505)
Q Consensus 240 ~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~ 272 (505)
+.++.+.. .+|.|.|+|.|.|..+.......
T Consensus 146 ~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 146 QKTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp SSEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred CCEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 34555533 67899999999999987665543
No 353
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.67 E-value=7.3e-16 Score=126.11 Aligned_cols=151 Identities=19% Similarity=0.214 Sum_probs=106.7
Q ss_pred eEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecC------------CCcEEEe-eCCCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS------------GGRRKIF-ENGNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~------------~~~~~~~-~~~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
.+.+.+|++|+|.|.+.+ |.+.|.|++++..+.. ..+..+. .+++|.|.+++.+|+|.|.|.+.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 456889999999999854 7889999998865421 1233332 4578999999999999999999988
Q ss_pred CCceeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEE
Q psy14886 165 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 244 (505)
Q Consensus 165 ~g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 244 (505)
.| ...+.|.|..++... .+... .....|.|.+.+.+.| .+.|++++..+.... ...+.
T Consensus 83 ~~--~~~~~L~V~~~~~~p-----~i~~~-~~~~~L~C~~~~~p~p--~i~W~~~~~~l~~~~------------~~~l~ 140 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMVSKP-----MIYWE-CSNATLTCEVLEGTDV--ELKLYQGKEHLRSLR------------QKTMS 140 (171)
T ss_dssp CS--CEEEEEEEECCCCCC-----EEEEE-TTTTEEEEECSSCSSC--EEEEEETTEEEEEES------------SSEEE
T ss_pred CC--cEEEEEEEECcCCCC-----EEEEe-cCCcEEEEEeCCCCCc--EEEEEECCEECcCCc------------ceEEE
Confidence 77 566788886643211 11111 1124799999887654 677999998775321 12333
Q ss_pred EecCCCCCCEEEEEEEEecCCcEEEEEEE
Q psy14886 245 ITNASFADAGEYECVVKSTVGKISTKTTV 273 (505)
Q Consensus 245 i~~~~~~~~g~y~C~~~n~~g~~~~~~~l 273 (505)
+. ...+.|.|+|.|.|..|.......+
T Consensus 141 ~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 141 YQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred Ee--ccCCCceEEEEEEcccCcccceeEE
Confidence 33 3678899999999999987666544
No 354
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=7.2e-16 Score=117.06 Aligned_cols=100 Identities=22% Similarity=0.266 Sum_probs=83.6
Q ss_pred CCCCCCCCCCceeeeecc--ccccEEEEEEeCCccccCCCCceEEEEEEEcC---CCCcEEEEeeecCceeeEEEEcCCc
Q psy14886 381 TPADKPYQAPSRIGGGGG--KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRIPSE 455 (505)
Q Consensus 381 t~~~~p~~~P~~~~~~~~--~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~L 455 (505)
|.+..|+.+|.++.+... +.++|.|.|++ +.+.+|.|++|.|+|+..+ ...|....... ..+.+.|.+|
T Consensus 3 T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~L 76 (114)
T 2ede_A 3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQP--PLEANGKITAYILFYTLDKNIPIDDWIMETISG----DRLTHQIMDL 76 (114)
T ss_dssp CCCCCCCSCCEEEEEEECSSCSSCEEEEEEC--CSSCSSCCSEEEEEEESCSSSCTTTSEEEEEET----TCCEEEECSC
T ss_pred CCCCCCCCCCcceEEEEccCCCCEEEEEECC--CCCCCCceeEEEEEEEeCCCCCccceEEEEECC----CceEEEEcCC
Confidence 557788899999999876 77999999998 4677889999999999855 23566444332 3467899999
Q ss_pred cceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 456 FYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 456 ~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
.|++.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 77 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 107 (114)
T 2ede_A 77 NLDTMYYFRIQARNSKGVGPLSDPILFRTLK 107 (114)
T ss_dssp CSSCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CCCCEEEEEEEEEeCCcCcCCcccEEEEecC
Confidence 9999999999999999999999999998864
No 355
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.67 E-value=9.8e-16 Score=131.16 Aligned_cols=166 Identities=19% Similarity=0.259 Sum_probs=111.6
Q ss_pred ceEEeeCCCeEEEEeecCCC-------CCCeEEEEECCEE------e-----------cCCCcEEEee-----CCCEEEc
Q psy14886 97 SETYAGEGGNVTIFCNPEAA-------PKPKFVWKKDGNI------I-----------GSGGRRKIFE-----NGNLLIS 147 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~-------p~~~i~W~~~g~~------~-----------~~~~~~~~~~-----~~~l~i~ 147 (505)
..+.+.+|++++|.|.+.+. +.+.+.|++++.. + ....++.+.. +.+|.|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~ 87 (214)
T 2zg1_A 8 KSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIG 87 (214)
T ss_dssp SEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEEC
T ss_pred cEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEc
Confidence 45678999999999998654 4679999997642 1 0123444432 2379999
Q ss_pred CCCCCCCEEEEEEEEcCCCcee----eeEEEEEEeCCeeee-eCCCceEEEeeccEEEEEEeeec-C-CCCeEEEEEeCC
Q psy14886 148 PVSRDDSGIYSCTATNVHGMDE----SKGRLIVLHGPSYYE-QLPPKITIAAHRNLQLRCSAHTE-E-LLDVAYIWTHNG 220 (505)
Q Consensus 148 ~v~~~d~G~y~C~~~~~~g~~~----~~~~l~v~~~p~~~~-~~~~~~~~~~g~~~~l~C~~~~~-~-~~~~~~~w~~~~ 220 (505)
+++.+|+|.|.|.+.+..+... ..+.|.|...+.... ..+. .+..|+.++|.|.+.+. + .|...+.|++++
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~ 165 (214)
T 2zg1_A 88 DARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLE--PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNA 165 (214)
T ss_dssp SCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--C--CCCTTCCEEEEEECTTCCSCSSCCEEEEESST
T ss_pred cCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCc--cccCCCeEEEEEEeccCCCCCCCceEEEeCCC
Confidence 9999999999999998763321 357788876432111 1111 25689999999999774 1 234577899987
Q ss_pred EEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc--EEEEEEE
Q psy14886 221 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTV 273 (505)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~--~~~~~~l 273 (505)
...... . ....+.|.|..+..++.|.|+|.|.|..+. .+..+.|
T Consensus 166 ~~~~~~--------~-~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 166 LSPLDP--------E-TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQL 211 (214)
T ss_dssp TSSSCS--------S-CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEEC
T ss_pred CccCCC--------C-ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEE
Confidence 543211 1 134578999999899999999999997654 3444444
No 356
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.67 E-value=6.4e-17 Score=139.53 Aligned_cols=163 Identities=17% Similarity=0.238 Sum_probs=107.0
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc----C----C--CCCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN----S----E--TLPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~----~----~--~~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. . . .......+|+.+. ..+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 90 (225)
T 1op3_H 12 VKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR-VED 90 (225)
T ss_dssp EETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC-GGG
T ss_pred ecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC-hhh
Confidence 46899999999998766 6889999953 2110 0 0 0000124577653 2589999999 999
Q ss_pred CeEEEEEEEcccC-----c--e-EeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECC
Q psy14886 61 PAMYQCRAKNQLK-----T--R-YSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDG 127 (505)
Q Consensus 61 ~G~Y~C~~~~~~~-----~--~-~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g 127 (505)
+|.|.|.+.+..+ . . ...+.|.|... +|.+....... .+.+|+.++|.|.+.+. |.+ .+.|++++
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~--~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 168 (225)
T 1op3_H 91 TAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS--KSTSGGTAALGCLVKDYFPEPVTVSWNSGA 168 (225)
T ss_dssp CEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT--TCCCCCEEEEEEEEEEEBSSCCEEECCTTS
T ss_pred CEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc--cccCCCcEEEEEEEEeEECCCeEEEEecCC
Confidence 9999999998754 2 1 12467777752 23332211111 24689999999999876 766 99999988
Q ss_pred EEecCC-CcEEEeeC------CCEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 128 NIIGSG-GRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 128 ~~~~~~-~~~~~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
..+... .......+ ..|.|.++..+| |.|+|.|.|..+.
T Consensus 169 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 169 LTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (225)
T ss_dssp CCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGT
T ss_pred CcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCC
Confidence 653210 00011112 248888888888 9999999986544
No 357
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.67 E-value=5.5e-16 Score=132.63 Aligned_cols=162 Identities=22% Similarity=0.291 Sum_probs=109.8
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC--EE---ec---------CCCcEEEeeCC---CEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---IG---------SGGRRKIFENG---NLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~~---~~---------~~~~~~~~~~~---~l~i~~v~~~d~G~y~C 159 (505)
..+.+.+|++++|.|.+.+.|.+.+.|++++ .. +. ...++.....+ +|.|.+++.+|+|.|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3nl4_L 9 ASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYC 88 (213)
T ss_dssp SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEE
Confidence 4567899999999999999988999999842 11 10 12344444332 69999999999999999
Q ss_pred EEEcCCCc---eeeeEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeee-cCCCCeEEEEEeCCEEecCCCCC---
Q psy14886 160 TATNVHGM---DESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMDLN--- 229 (505)
Q Consensus 160 ~~~~~~g~---~~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~~~w~~~~~~~~~~~~~--- 229 (505)
.+.+..+. ......|.|.. +|.+... +....+..|+.+.|.|.+.+ .| ...+.|+++|..+......
T Consensus 89 ~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~g~~v~l~C~~~g~~P--~~~v~W~k~g~~~~~~~~~~~~ 165 (213)
T 3nl4_L 89 QSTYENPTYVSFGGGTEVGVKGDPVAPTVLIF-PPSADLVATGTVTIVCVANKYFP--DVTVTWEVDGTTQTTGIENSKT 165 (213)
T ss_dssp EECCSSTTTCEECCCEEEEEECCCBCCEEEEE-CCCHHHHTTSEEEEEEEEEEEBS--CCEEEEEETTEECCSSEEEEEC
T ss_pred ecCCCCceeEEeCCCeEEEEeCCCcCCeEEEe-CCchhhccCCcEeEEEEEecccC--CcEEEEEeCCccCCCCeecccC
Confidence 99987763 23345666643 2332222 22233445889999999998 55 4577899999887642100
Q ss_pred -cccCCeeeecCCeEEEecCCCCCCEEEEEEEE
Q psy14886 230 -ELETPNINIDGGLLEITNASFADAGEYECVVK 261 (505)
Q Consensus 230 -~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~ 261 (505)
...........+.|.|..+..+|.|.|+|.|.
T Consensus 166 ~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 166 PQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 00001111123568899988999999999998
No 358
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.67 E-value=8e-17 Score=138.70 Aligned_cols=179 Identities=15% Similarity=0.167 Sum_probs=116.7
Q ss_pred eEEeeCCCeEEEEeecCC-CCCC----eEEEEECCEEec-------------CCCcEEEee--------CCCEEEcCCCC
Q psy14886 98 ETYAGEGGNVTIFCNPEA-APKP----KFVWKKDGNIIG-------------SGGRRKIFE--------NGNLLISPVSR 151 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~-~p~~----~i~W~~~g~~~~-------------~~~~~~~~~--------~~~l~i~~v~~ 151 (505)
.+.+.+|+++.|.|.+.+ .+.+ .+.|++++.... ...+..+.. +.+|.|.+++.
T Consensus 8 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 87 (221)
T 3eow_R 8 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRV 87 (221)
T ss_dssp CCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSC
T ss_pred cEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCCh
Confidence 345789999999999854 3433 499999864211 123444432 45799999999
Q ss_pred CCCEEEEEEEEcCC-CceeeeEEEEEEeCCeeeeeCCCceEEEeeccE-EEEEEee-ecCCCCeEEEEEeCCEEecCCCC
Q psy14886 152 DDSGIYSCTATNVH-GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL-QLRCSAH-TEELLDVAYIWTHNGVRIGNMDL 228 (505)
Q Consensus 152 ~d~G~y~C~~~~~~-g~~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~-~l~C~~~-~~~~~~~~~~w~~~~~~~~~~~~ 228 (505)
+|+|.|+|.+.+.. +.....+.|.|..+|.+........ ..|+.+ .|.|.+. +.|.+ .+.|++++........
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~--~~g~~~~~l~C~~~~g~P~p--~v~W~k~~~~~~~~~~ 163 (221)
T 3eow_R 88 EDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ--LTGEPVPMARCVSTGGRPPA--QITWHSDLGGMPQTSQ 163 (221)
T ss_dssp CCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC--CCSSSCCEEEEEEESCSSCC--CEEEECSSSCCCCCEE
T ss_pred HHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc--cCCceEEEEEEECCCccCCC--eeEEEeCCCCCCccce
Confidence 99999999999876 6667777888877666654322222 567788 5999988 56655 5679876433221100
Q ss_pred CcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCCCCC
Q psy14886 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 282 (505)
Q Consensus 229 ~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p 282 (505)
............+.|.|.....+|.|.|+|.|.|..+..... +.+...|..|
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~--~~v~~~~~~~ 215 (221)
T 3eow_R 164 VPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQL--LTVSLTVYYP 215 (221)
T ss_dssp ECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEE--EEECCCCCC-
T ss_pred eecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeE--EEEEEEEEcc
Confidence 000001111123468888999999999999999988765444 4455555544
No 359
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.67 E-value=2.4e-16 Score=135.59 Aligned_cols=161 Identities=19% Similarity=0.312 Sum_probs=105.9
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc----CCC--------CCCCCCCcEEEEC------CeEEEEcCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN----SET--------LPLEDQDRYFIQD------NVLTIRYLNPE 58 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~----~~~--------~~~~~~~~~~~~~------~~L~i~~~~~~ 58 (505)
+.+|++++|.|.+.+.+ ...+.|+|.. ..+. ... ......+|+.+.. .+|.|.+++ .
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~ 90 (221)
T 3m8o_H 12 VQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLK-S 90 (221)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCC-G
T ss_pred EcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCC-H
Confidence 46899999999998743 6899999842 1110 000 0001235666532 269999999 9
Q ss_pred CCCeEEEEEEEcccC--ceEeeEEEEEEe---cCCCcc-CCCCCceEEeeCCCeEEEEeecCC-CCC--CeEEEEECCEE
Q psy14886 59 RDPAMYQCRAKNQLK--TRYSSAQLRVLT---LKPSFK-KRPLESETYAGEGGNVTIFCNPEA-APK--PKFVWKKDGNI 129 (505)
Q Consensus 59 ~d~G~Y~C~~~~~~~--~~~~~~~l~v~~---~~p~~~-~~~~~~~~~v~~g~~v~l~C~~~~-~p~--~~i~W~~~g~~ 129 (505)
+|+|.|.|.+.+... .....+.|.|.. .+|.+. ..+ ... .+|+.++|.|.+.+ .|. +.+.|+++|..
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~--~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~ 166 (221)
T 3m8o_H 91 DDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSL--CST--QPDGNVVIACLVQGFFPQEPLSVTWSESGQG 166 (221)
T ss_dssp GGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEEC--CSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCSTT
T ss_pred HHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecC--ccc--ccCCCEEEEEEEEeeECCCCEEEEEEECCEE
Confidence 999999999987631 222345666652 122222 111 111 58999999999988 665 49999998876
Q ss_pred ec----------CCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 130 IG----------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 130 ~~----------~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
+. .+..+.. ...|.|..+...|+|.|+|.|.+..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 167 VTARNFPPSQDASGDLYTT--SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CEEEECCCEECSSSSCEEE--EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred CceEEcCceeeCCCCcEEE--EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 52 1222222 1248899999999999999999876543
No 360
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.67 E-value=4.7e-17 Score=148.91 Aligned_cols=162 Identities=15% Similarity=0.248 Sum_probs=102.9
Q ss_pred CeEEEEeecCCC-C-CCeEEEEECCEEecCCCcE--EEeeCC------CEEEcCCCCCCCEEEEEEEEcCCCceeeeEEE
Q psy14886 105 GNVTIFCNPEAA-P-KPKFVWKKDGNIIGSGGRR--KIFENG------NLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174 (505)
Q Consensus 105 ~~v~l~C~~~~~-p-~~~i~W~~~g~~~~~~~~~--~~~~~~------~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l 174 (505)
+.+.|.|.+.+. | .+.|.|+++|..+...... ....++ .|.|.++...|+|.|+|.|.|..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 699999999885 4 4699999999988643211 111122 36677777779999999999977654433321
Q ss_pred EEE---eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCC--eEEEEEeCC-EEecCCCCCc--ccCCeeeecCCeEEEe
Q psy14886 175 IVL---HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VAYIWTHNG-VRIGNMDLNE--LETPNINIDGGLLEIT 246 (505)
Q Consensus 175 ~v~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~--~~~~w~~~~-~~~~~~~~~~--~~~~~~~~~~~~l~i~ 246 (505)
.+. ..|......+....+..|+.+.|.|.+.+.++.. +.+.|++++ ..+....... .....+ ...+.|.|.
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~-~~~~~L~I~ 183 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTL-TVTSTLPVG 183 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCE-EEEEEEECC
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCE-EEEEEEEEC
Confidence 111 1233333334444567899999999999875322 578899965 3332211000 000011 123468899
Q ss_pred cCCCCCCEEEEEEEEecCCcE
Q psy14886 247 NASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 247 ~~~~~~~g~y~C~~~n~~g~~ 267 (505)
.+..+|.|.|+|.|.|..+..
T Consensus 184 ~~~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 184 TRDWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp HHHHHTTCCEEEEEECTTSSS
T ss_pred HHHccCCCCEEEEEECCCCCC
Confidence 999999999999999986543
No 361
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.67 E-value=4.2e-16 Score=134.93 Aligned_cols=173 Identities=20% Similarity=0.273 Sum_probs=107.8
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc---C-C--C---CCCCCCCcEEEEC------CeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN---S-E--T---LPLEDQDRYFIQD------NVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~---~-~--~---~~~~~~~~~~~~~------~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.|.+.+.+ ...+.|+|.. ..+. . . . ......+|+.+.. .+|.|.+++ .+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D~ 90 (232)
T 1dn0_B 12 LKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT-AADT 90 (232)
T ss_dssp ECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC-GGGC
T ss_pred EeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC-cccC
Confidence 46899999999998764 5789999943 2111 0 0 0 0001246776531 289999999 9999
Q ss_pred eEEEEEEEccc--Cc----eEeeEEEEEEec---CCCccCCCCCceEEeeCC-CeEEEEeecCCC-CCC-eEEEEE-CCE
Q psy14886 62 AMYQCRAKNQL--KT----RYSSAQLRVLTL---KPSFKKRPLESETYAGEG-GNVTIFCNPEAA-PKP-KFVWKK-DGN 128 (505)
Q Consensus 62 G~Y~C~~~~~~--~~----~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g-~~v~l~C~~~~~-p~~-~i~W~~-~g~ 128 (505)
|.|.|.+.+.. +. ....+.|.|... +|.+.... +...+..| +.++|.|.+.+. |.+ .+.|++ +|.
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~ 168 (232)
T 1dn0_B 91 AVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLV--SCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNS 168 (232)
T ss_dssp EEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEE--CC------CCSEEEEEEEEEEBSSCCEEEEEETTSC
T ss_pred EEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEec--cccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCC
Confidence 99999998321 11 112457777642 23222111 11124478 999999999886 766 999999 888
Q ss_pred EecCC---CcE----EEeeCCCEEEcCCCC--CCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 129 IIGSG---GRR----KIFENGNLLISPVSR--DDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 129 ~~~~~---~~~----~~~~~~~l~i~~v~~--~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
.+... ... .......|.|..+.. +|.|.|+|.|.|..+.......+.+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 169 DISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp EECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC
T ss_pred ceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCC
Confidence 76430 000 011123588888876 7899999999999887655544443
No 362
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.66 E-value=3.1e-16 Score=134.81 Aligned_cols=173 Identities=16% Similarity=0.255 Sum_probs=110.6
Q ss_pred eEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEec-----------------CCCcEEEee-----CCCEEEcCCCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG-----------------SGGRRKIFE-----NGNLLISPVSR 151 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~~-----------------~~~~~~~~~-----~~~l~i~~v~~ 151 (505)
...+.+|++++|.|.+.+.+ .+.+.|+++ |..+. ...++.+.. ..+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (219)
T 1c1e_H 9 PELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKN 88 (219)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCG
T ss_pred CeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 35688999999999998765 679999986 33221 123444432 23699999999
Q ss_pred CCCEEEEEEEEcCCCce----eeeEEEEEEeC----CeeeeeCCCceEEEeeccEEEEEEeee-cCCCCeEEEEEeCCEE
Q psy14886 152 DDSGIYSCTATNVHGMD----ESKGRLIVLHG----PSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVR 222 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~~----~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~~~w~~~~~~ 222 (505)
+|+|.|.|.+.+..+.. ...+.|.|... |.+... ++...+..|+.+.|.|.+.+ .|.| +.+.|++++..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g~~ 166 (219)
T 1c1e_H 89 EDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEP-VTVTWNSGSLS 166 (219)
T ss_dssp GGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEE-CCCSSSCCSSEEEEEEEEEEEBSSC-CEEEEGGGTBC
T ss_pred ccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEe-cCccccccCCeEEEEEEcccccCCC-eEEEEEeCCcc
Confidence 99999999999876421 23466777653 333222 22233467999999999998 5554 46789998865
Q ss_pred ecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEE
Q psy14886 223 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273 (505)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l 273 (505)
+.................+.|.|..... |.|.|+|.|.|..|.......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 167 SGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp TTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEEC
T ss_pred cceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEec
Confidence 3211000000001111224677755444 5599999999998876544443
No 363
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.66 E-value=9e-16 Score=136.22 Aligned_cols=162 Identities=16% Similarity=0.266 Sum_probs=105.1
Q ss_pred CCCCCceEEEEEEeccC-----CCeEEEEECC--EEC---cCC--CCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEE
Q psy14886 1 MDNQADLTWTCEAFGVP-----DVTYSWFRNG--ELL---NSE--TLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMY 64 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p-----~~~~~W~~~~--~~l---~~~--~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y 64 (505)
|.+|++++|.|.+.+.+ .+.+.|+|++ ..+ ... ........|+.+. ..+|.|.+++ .+|+|.|
T Consensus 27 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~DsG~Y 105 (268)
T 1x9q_A 27 VSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVE-AEDLGVY 105 (268)
T ss_dssp CCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC-GGGCEEE
T ss_pred ecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCC-hhHCEEE
Confidence 57999999999998766 4889999953 211 100 0000123566653 2379999999 9999999
Q ss_pred EEEEEcccCceE-eeEEEEEEecC----CCc-----------------cCCCCCceEEeeCCCeEEEEeecCCCCC--Ce
Q psy14886 65 QCRAKNQLKTRY-SSAQLRVLTLK----PSF-----------------KKRPLESETYAGEGGNVTIFCNPEAAPK--PK 120 (505)
Q Consensus 65 ~C~~~~~~~~~~-~~~~l~v~~~~----p~~-----------------~~~~~~~~~~v~~g~~v~l~C~~~~~p~--~~ 120 (505)
.|.+.+..+... ..+.|.|...+ |.+ .+.. +....+.+|++++|.|.+.+.+. +.
T Consensus 106 ~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~ 184 (268)
T 1x9q_A 106 FCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDE-TGGGLVQPGGAMKLSCVTSGFTFGHYW 184 (268)
T ss_dssp EEEECSSSSCEECCCEEEC------------------------CGGGCEEEE-ECCEEECTTCCEEEEEEEESSCGGGCE
T ss_pred EEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEEC-CCceEecCCCcEEEEEEecCccccccE
Confidence 999988654322 23556665421 100 0100 12457899999999999987753 79
Q ss_pred EEEEEC--CEEe-------------------cCCCcEEEeeC-----CCEEEcCCCCCCCEEEEEEEEcC
Q psy14886 121 FVWKKD--GNII-------------------GSGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATNV 164 (505)
Q Consensus 121 i~W~~~--g~~~-------------------~~~~~~~~~~~-----~~l~i~~v~~~d~G~y~C~~~~~ 164 (505)
+.|+++ +..+ ....++.+..+ .+|.|.+++.+|+|.|+|.+.+.
T Consensus 185 v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 185 MNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 999984 2221 01234444322 36999999999999999999863
No 364
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.66 E-value=2.1e-16 Score=133.74 Aligned_cols=154 Identities=16% Similarity=0.215 Sum_probs=104.0
Q ss_pred EEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcE---E-EeeCCCEEEcCCCCCCCEEEEEEEEcCC-----Ccee
Q psy14886 99 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR---K-IFENGNLLISPVSRDDSGIYSCTATNVH-----GMDE 169 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~---~-~~~~~~l~i~~v~~~d~G~y~C~~~~~~-----g~~~ 169 (505)
..+.+|++++|.|.+.+ +.+.+.|+|+|..+...... . ...++.|.|.+++.+|+|.|+|.+.+.. ....
T Consensus 17 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s 95 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPS 95 (201)
T ss_dssp SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCC
T ss_pred CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCC
Confidence 45889999999999974 67799999988754321110 0 0124569999999999999999998643 1223
Q ss_pred eeEEEEEEeC--CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeee--ecCCeEEE
Q psy14886 170 SKGRLIVLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN--IDGGLLEI 245 (505)
Q Consensus 170 ~~~~l~v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i 245 (505)
..+.|.|... ++.+...+. ..+..|+.++|.|.+.+. . ..+.|+++|..+..... ..... .....|.|
T Consensus 96 ~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~~-~--~~~~w~k~g~~~~~~~~----~~~~~~~~~~~~L~i 167 (201)
T 1nkr_A 96 DPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRSS-Y--DMYHLSREGEAHERRLP----AGPKVNGTFQADFPL 167 (201)
T ss_dssp CCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESSC-C--SEEEEEETTCSSCEEEE----CEEEETTEEEEEEEE
T ss_pred CCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCCC-C--ceEEEEECCcccCcccc----cccccCCceEEEEEe
Confidence 4467777653 222222222 467899999999998753 2 46789999865532110 00000 11457889
Q ss_pred ecCCCCCCEEEEEEEEec
Q psy14886 246 TNASFADAGEYECVVKST 263 (505)
Q Consensus 246 ~~~~~~~~g~y~C~~~n~ 263 (505)
.+++ |.|.|+|.|.+.
T Consensus 168 ~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 168 GPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EECC--SCEEEEEEEEET
T ss_pred CCcC--CCeeEEEEEEcC
Confidence 9887 999999999865
No 365
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.66 E-value=3e-16 Score=136.95 Aligned_cols=160 Identities=17% Similarity=0.227 Sum_probs=105.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--------------CEECcCCCCCCCCCCcEEEE-----CCeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--------------GELLNSETLPLEDQDRYFIQ-----DNVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--------------~~~l~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.|.+.+ +.+.+.|+|. +...... ...+|+.+. ..+|.|.+++ .+|+
T Consensus 14 v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~sL~I~~v~-~~D~ 87 (240)
T 3q5y_A 14 KEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKG----FLPSRFSVQQFDDYHSEMNMSALE-LEDS 87 (240)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEEC----SCCTTEEEEECTTSCEEEEECSCC-GGGC
T ss_pred ecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCc----ccCCeEEEEeCCCCEEEEEECcCC-hhHC
Confidence 358999999999976 7789999992 1111100 123566553 2479999999 9999
Q ss_pred eEEEEEEEcc--cC-ceEeeEEEEEEe-----cCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEec
Q psy14886 62 AMYQCRAKNQ--LK-TRYSSAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIG 131 (505)
Q Consensus 62 G~Y~C~~~~~--~~-~~~~~~~l~v~~-----~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~ 131 (505)
|.|+|.+.+. .. .....+.|.|.. .+|.+.... +....+.+|+.++|.|.+.+ .|.+ .+.|+++|..+.
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~ 166 (240)
T 3q5y_A 88 AMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFE-PSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVH 166 (240)
T ss_dssp EEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeC-CchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECc
Confidence 9999999732 11 222345677763 233332211 12223456899999999988 5655 899999999886
Q ss_pred CCCcE----EEeeCC------CEEEcCCCCCC-CEEEEEEEEcCCCc
Q psy14886 132 SGGRR----KIFENG------NLLISPVSRDD-SGIYSCTATNVHGM 167 (505)
Q Consensus 132 ~~~~~----~~~~~~------~l~i~~v~~~d-~G~y~C~~~~~~g~ 167 (505)
..... ....++ .|.|..+...| +|.|+|.|.|....
T Consensus 167 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 167 SGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp TTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 53221 112233 37888888888 77999999986543
No 366
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.66 E-value=5.6e-16 Score=133.29 Aligned_cols=195 Identities=15% Similarity=0.122 Sum_probs=130.3
Q ss_pred CCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCc--eeeEE-eeeccCCce
Q psy14886 280 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR--KEASI-ENVLVPWST 356 (505)
Q Consensus 280 ~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~--~~~~~-~~~L~~~~~ 356 (505)
..|.++.+.......+.++|+++.+.+.....|.+.|+..+ ..|..+..... ..+... ....+ ..++..+..
T Consensus 22 ~~P~nl~C~~~~~~~l~C~W~~~~~~~~~~~~y~l~y~~~~-~~~~~C~~~~~----~~~~~~~~~~C~~~~~~~~~~~~ 96 (227)
T 1eer_B 22 RGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLED-EPWKLCRLHQA----PTARGAVRFWCSLPTADTSSFVP 96 (227)
T ss_dssp HSTTSCEEEBSSSSCCEEEEEESCCSSCCTTSEEEEEEETT-SCCEEECEEEE----EETTTEEEEEEECCGGGCCBSSC
T ss_pred cCCcCCeEECCCCCEEEEEecCCCCCCCCCccEEEEEEcCC-CCceeccceec----cCCCCCceEEEEeCCCcceeeEE
Confidence 35788999888889999999998765545688999998763 33555421100 000011 11111 113677889
Q ss_pred eEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccc-cccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcE
Q psy14886 357 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK-IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 435 (505)
Q Consensus 357 y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~-~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~ 435 (505)
|.|+|.|.|..+.. . ..+.+....++.||.++++.... .+.+.|+|++|...+.++ ++.|.|+|+..+...|.
T Consensus 97 y~~~V~a~~~~~~~--~---~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~-~l~Yev~y~~~~~~~w~ 170 (227)
T 1eer_B 97 LELRVTAASGAPRY--H---RVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTS-HIRYEVDVSAGQGAGSV 170 (227)
T ss_dssp EEEEEEETTSCEEE--E---EEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCGG-GEEEEEEEECCSSSCCC
T ss_pred EEEEEEecCCCccE--E---EEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCccccc-ceEEEEEEEcCCCCCcE
Confidence 99999998754321 1 13444555677899999998764 789999999954433333 88999999987766675
Q ss_pred EEEeeecCceeeEEEEcCCccceeeEEEEEEEecC----CCC-CCCCceEEEeecceEE
Q psy14886 436 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND----VGP-GPESEVVTIWHDPLVI 489 (505)
Q Consensus 436 ~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~----~G~-g~~s~~~~~~t~p~~~ 489 (505)
..... .. ..+.+.|.+|.|++.|.|+|+|.+. .|. |++|+.+.+.| |..+
T Consensus 171 ~~~~~-~~--~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t-~~d~ 225 (227)
T 1eer_B 171 QRVEI-LE--GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT-PSDL 225 (227)
T ss_dssp CEEEE-CT--TCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-----
T ss_pred EEEEE-ec--CceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC-cccC
Confidence 42111 11 2356788999999999999999975 243 89999998888 5443
No 367
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=1.3e-16 Score=122.79 Aligned_cols=111 Identities=19% Similarity=0.328 Sum_probs=91.4
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC---CcEEEEeeecCc
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---EFQSETLKEYGN 444 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~ 444 (505)
|.|++|... .+.|.+..|+.+|.++++...+.++|.|.|++ +.+.++.|++|.|+|+..+.. .|.....
T Consensus 1 G~g~~S~~~-~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~----- 72 (121)
T 2dlh_A 1 GSSGSSGPV-LTQTSEQAPSSAPRDVQARMLSSTTILVQWKE--PEEPNGQIQGYRVYYTMDPTQHVNNWMKHNV----- 72 (121)
T ss_dssp CCCCCCSSS-CSCCCCCCCCSCCEEEEECCCSSSBCCEEEEC--CSCCCSCEEEEEEECCSCTTSCTTTSCCCCC-----
T ss_pred CCCCCCCCE-EEECCCcCCCCCCcccEEEecCCCEEEEEECC--CCCCCCcEeEEEEEEEeCCCCCccccEEEec-----
Confidence 667777775 77888888988999999988899999999998 467888999999999976532 2332111
Q ss_pred eeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 445 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 445 ~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
.....+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 73 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 114 (121)
T 2dlh_A 73 ADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQT 114 (121)
T ss_dssp SSCSEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred CCceEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCC
Confidence 134578999999999999999999999999999999998864
No 368
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.66 E-value=2.4e-16 Score=121.97 Aligned_cols=105 Identities=19% Similarity=0.303 Sum_probs=87.4
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCc--------EEEEeeecCceeeEE
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF--------QSETLKEYGNVGIAV 449 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~--------~~~~~~~~~~~~~~~ 449 (505)
.+.|.+..|+.+|.++++...+.++|.|.|++|+....+|.|++|+|+|+..+...+ ...... . ..+.
T Consensus 6 ~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~ 81 (125)
T 1uen_A 6 SGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ--G--SKTH 81 (125)
T ss_dssp CCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE--S--SCSE
T ss_pred EEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEec--C--CccE
Confidence 678888999899999999888899999999996667789999999999998774332 112221 1 3457
Q ss_pred EEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 450 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 450 ~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 82 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 118 (125)
T 1uen_A 82 GMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPE 118 (125)
T ss_dssp EEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred EEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCC
Confidence 8899999999999999999999999999999998864
No 369
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.66 E-value=1.9e-15 Score=134.74 Aligned_cols=183 Identities=17% Similarity=0.183 Sum_probs=115.6
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECCE-----Eec---------CCCcEEEeeCC---CEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDGN-----IIG---------SGGRRKIFENG---NLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~-----~~~---------~~~~~~~~~~~---~l~i~~v~~~d~G~y~C 159 (505)
..+.+.+|++++|.|.+.+.|.+.+.|++++. .+. ...++....++ +|.|.+++.+|+|.|.|
T Consensus 20 ~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 99 (276)
T 3auv_A 20 SSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYC 99 (276)
T ss_dssp SEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEE
Confidence 45678999999999999998888999998531 121 12355444333 69999999999999999
Q ss_pred EEEcCCCce-eeeEEEEEEeCC-------------eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCC--EEe
Q psy14886 160 TATNVHGMD-ESKGRLIVLHGP-------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRI 223 (505)
Q Consensus 160 ~~~~~~g~~-~~~~~l~v~~~p-------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~--~~~ 223 (505)
.+.|..+.. ...+.|.|...| ......+....+..|+.++|.|.+.+.+.+...+.|++++ ...
T Consensus 100 ~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~ 179 (276)
T 3auv_A 100 QQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCL 179 (276)
T ss_dssp EECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCE
T ss_pred EEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCc
Confidence 999875542 223566665542 2222223466788999999999998876434577898852 111
Q ss_pred ---c---CC------CCCcccCCeeee----cCCeEEEecCCCCCCEEEEEEEEecC---Cc--EEEEEEEEEcCCC
Q psy14886 224 ---G---NM------DLNELETPNINI----DGGLLEITNASFADAGEYECVVKSTV---GK--ISTKTTVIVEGPP 279 (505)
Q Consensus 224 ---~---~~------~~~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~n~~---g~--~~~~~~l~v~~~p 279 (505)
. .. ............ ....|.|.++..+|+|.|.|.|.|.. +. ......|.|...+
T Consensus 180 ~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~~ 256 (276)
T 3auv_A 180 EWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSAS 256 (276)
T ss_dssp EEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC---
T ss_pred EEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEcccc
Confidence 0 00 000000111111 12379999999999999999999973 21 1233556665433
No 370
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.65 E-value=2.5e-16 Score=135.70 Aligned_cols=171 Identities=16% Similarity=0.284 Sum_probs=111.8
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEE---ec----------------CCCcEEEeeC-----CCEEEcCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---IG----------------SGGRRKIFEN-----GNLLISPVS 150 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~---~~----------------~~~~~~~~~~-----~~l~i~~v~ 150 (505)
..+.+|++++|.|.+.+.+ .+.+.|+++ +.. +. ...++.+..+ .+|.|.+++
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 89 (222)
T 1q9r_B 10 GLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLR 89 (222)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred eeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCC
Confidence 4588999999999998765 679999984 221 10 1235555432 269999999
Q ss_pred CCCCEEEEEEEEcCCC-----ceeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeec-CCCCeEEEEEeCC
Q psy14886 151 RDDSGIYSCTATNVHG-----MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNG 220 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g-----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~~w~~~~ 220 (505)
.+|+|.|.|.+.+..+ .......|.|.. +|.+.... ....+..|+.+.|.|.+.+. |.| +.+.|+++|
T Consensus 90 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g 167 (222)
T 1q9r_B 90 AEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLA-PGSAAQTNSMVTLGCLVKGYFPEP-VTVTWNSGS 167 (222)
T ss_dssp GGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEEC-CCSCCCCSSEEEEEEEEEEEBSSC-CEEEEGGGT
T ss_pred cccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcc-ccccccCCCcEEEEEEEccEECCC-CEEEEecCC
Confidence 9999999999998654 222345677754 23333222 22234578999999999986 543 477899987
Q ss_pred EEecCCCCCc-ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEE
Q psy14886 221 VRIGNMDLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 273 (505)
Q Consensus 221 ~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l 273 (505)
..+....... .... .....+.|.|.....+| |.|+|.|.|..|.......+
T Consensus 168 ~~~~~~~~~~~~~~~-~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 168 LSSGVHTFPAVLQSD-LYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp BCTTEEEEEEEEETT-EEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred eEcceEeccccccCC-cEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 6542210000 0001 11223468888888888 99999999999876554443
No 371
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.65 E-value=1.1e-14 Score=123.59 Aligned_cols=191 Identities=13% Similarity=0.049 Sum_probs=131.5
Q ss_pred CCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeec-cCCceeEE
Q psy14886 281 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL-VPWSTYEF 359 (505)
Q Consensus 281 ~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~~~y~~ 359 (505)
+|.++++....... .|+|+++.........|.|+|+..+...|.....-.. ......-+...+ .....|.+
T Consensus 11 ~P~nv~~~s~n~~~-iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~-------~~~~~Cdlt~~~~~~~~~Y~~ 82 (221)
T 4doh_R 11 KPANITFLSINMKN-VLQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRN-------INRTYCDLSAETSDYEHQYYA 82 (221)
T ss_dssp CCEEEEEEEETTEE-EEEEECCCCSSCCCCEEEEEEEETTSCCCEECGGGSS-------BSSSEEECTTTTCCSSCCEEE
T ss_pred CCceeEEEEECCcE-EEEEcCCCCCCCCCeEEEEEEEECCCCCceecccccC-------CCCCEEeCCCccccCCCCEEE
Confidence 57788887766666 4999987654466789999999877788987432111 112222233211 34568999
Q ss_pred EEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccc--cCC---------CCceEEEEEEE
Q psy14886 360 KVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK--QNA---------PNIYYKIFWRK 428 (505)
Q Consensus 360 ~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~--~~~---------~i~~Y~v~~~~ 428 (505)
||+|.+..+.+.++... .+.+......+||. +.+. ...++|.|.|.+|.... .+| ....|+|.|++
T Consensus 83 RV~A~~g~~~S~w~~~~-~F~p~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~ 159 (221)
T 4doh_R 83 RVRAIWGTKCSKWAESG-RFYPFLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLN 159 (221)
T ss_dssp EEEEESSSCBCCCEECC-CBCHHHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEE
T ss_pred EEEEEcCCcccCCEecC-ceechhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEE
Confidence 99999988777765432 44444455667786 7776 56789999999854321 223 15699999999
Q ss_pred cCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecC--CCCCCCCceEEEeecceE
Q psy14886 429 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND--VGPGPESEVVTIWHDPLV 488 (505)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~--~G~g~~s~~~~~~t~p~~ 488 (505)
.+....... .. ....+.|.+|.|++.|.|+|+|... .|.|.+|+...+.|.+.+
T Consensus 160 ~~~~~~~~~--~~----~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d~ 215 (221)
T 4doh_R 160 TKSNRTWSQ--CV----TNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKDQ 215 (221)
T ss_dssp TTTTEEEEE--EE----CSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC-
T ss_pred CCCCcEEEE--ee----cCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCCc
Confidence 874432211 11 2246789999999999999999975 799999999999887654
No 372
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.8e-15 Score=132.63 Aligned_cols=176 Identities=16% Similarity=0.203 Sum_probs=114.1
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEECC--EEe-----------------cCCCcEEEeeC-----CCEEEcCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII-----------------GSGGRRKIFEN-----GNLLISPVSRD 152 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g--~~~-----------------~~~~~~~~~~~-----~~l~i~~v~~~ 152 (505)
..+.+|++++|.|.+.+.| .+.+.|+++. ..+ ....++.+..+ .+|.|.+++.+
T Consensus 12 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (247)
T 2ghw_B 12 GVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 91 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHH
Confidence 5688999999999998876 5789999832 111 11245555432 25999999999
Q ss_pred CCEEEEEEEEcCCCc--eeeeEEEEEEeC--------------CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEE
Q psy14886 153 DSGIYSCTATNVHGM--DESKGRLIVLHG--------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 216 (505)
Q Consensus 153 d~G~y~C~~~~~~g~--~~~~~~l~v~~~--------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w 216 (505)
|+|.|+|.+.+..+. ....+.|.|... +..+...+....+..|+.+.|.|.+.+.+.+ .+.|
T Consensus 92 D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~--~v~W 169 (247)
T 2ghw_B 92 DTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRS--NLAW 169 (247)
T ss_dssp GCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTT--CEEE
T ss_pred HCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccc--eEEE
Confidence 999999999987322 222356777643 2222333455678899999999999988766 4669
Q ss_pred Ee--CCEEecC-----CCCCcccCCeee----ecCCeEEEecCCCCCCEEEEEEEEecCCcE-EEEEEEEEc
Q psy14886 217 TH--NGVRIGN-----MDLNELETPNIN----IDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVE 276 (505)
Q Consensus 217 ~~--~~~~~~~-----~~~~~~~~~~~~----~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~-~~~~~l~v~ 276 (505)
++ ++..+.. ..........+. .....|.|.++..+|+|.|.|.|.|..+.. .....|.|.
T Consensus 170 ~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 170 YQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 88 4433210 000000001111 122469999999999999999998864432 233455554
No 373
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.65 E-value=2e-16 Score=140.59 Aligned_cols=161 Identities=17% Similarity=0.271 Sum_probs=104.6
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEE--CCEEC------------cCCCCCCCCCCcEEEE-----CCeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFR--NGELL------------NSETLPLEDQDRYFIQ-----DNVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~--~~~~l------------~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.|.+. .+.+.+.|+| .+..+ .... ...+|+.+. +.+|.|.+++ .+|+
T Consensus 38 v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~R~~~~~~~~~~~sL~I~~v~-~~D~ 112 (268)
T 3pl6_D 38 TEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSG---LPNDRFFAVRPEGSVSTLKIQRTE-RGDS 112 (268)
T ss_dssp EETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTT---CCSTTEEEECTTSSSEEEEECSCC-GGGC
T ss_pred ecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCC---CccCcEEEEecCCCEEEEEECCCC-cccC
Confidence 35899999999986 5778999999 22211 1100 012566664 4579999999 9999
Q ss_pred eEEEEEEEcc--cCceEeeEEEEEEec-----CCCccCCCCCceEEeeCCCeEEEEeecCCCCC-C-eEEEEECCEEecC
Q psy14886 62 AMYQCRAKNQ--LKTRYSSAQLRVLTL-----KPSFKKRPLESETYAGEGGNVTIFCNPEAAPK-P-KFVWKKDGNIIGS 132 (505)
Q Consensus 62 G~Y~C~~~~~--~~~~~~~~~l~v~~~-----~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~-~-~i~W~~~g~~~~~ 132 (505)
|.|+|.+.+. .........|.|... +|.+.... +....+.+|+.++|.|.+.+.++ + .+.|+++|..+..
T Consensus 113 G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~ 191 (268)
T 3pl6_D 113 AVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 191 (268)
T ss_dssp EEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECT
T ss_pred EEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeC-CCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCC
Confidence 9999999874 222233456777641 23222211 11222456899999999988644 4 8999999988854
Q ss_pred CCcEEE--------eeCC------CEEEcCCCCCC-CEEEEEEEEcCCCc
Q psy14886 133 GGRRKI--------FENG------NLLISPVSRDD-SGIYSCTATNVHGM 167 (505)
Q Consensus 133 ~~~~~~--------~~~~------~l~i~~v~~~d-~G~y~C~~~~~~g~ 167 (505)
+..... ..++ .|.|......| +|.|+|.|.+....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 192 GVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp TEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 321110 0122 36666766666 99999999986543
No 374
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.65 E-value=1.4e-15 Score=116.67 Aligned_cols=104 Identities=20% Similarity=0.250 Sum_probs=84.6
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccc
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 457 (505)
.+.+.... |.+|.++.+.....++|.|.|+++. .+.++.|++|+|+|+..+...|....... ...+.+.|.+|.|
T Consensus 10 ~~~t~~~~-P~~P~~l~~~~~~~~sv~l~W~~p~-~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~i~~L~p 84 (120)
T 1x5f_A 10 APATTGPL-PSAPRDVVASLVSTRFIKLTWRTPA-SDPHGDNLTYSVFYTKEGIARERVENTSH---PGEMQVTIQNLMP 84 (120)
T ss_dssp CCCCCCCC-CCCCEEEEEEEECSSCEEEEEECCS-SCSSCCSSEEEEEEEETTCCCCEEEECSS---TTCSEEEECSCCT
T ss_pred EecCCCCC-CCCCCCcEEEecCCCEEEEEECCCC-CCCCCcEEEEEEEEEECCCCCceEEEecc---CCccEEEeCCCCC
Confidence 44454444 4799999999888999999999843 37888999999999998766666443322 2346789999999
Q ss_pred eeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 458 YTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 458 ~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
++.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 85 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 113 (120)
T 1x5f_A 85 ATVYIFRVMAQNKHGSGESSAPLRVETQP 113 (120)
T ss_dssp TCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred CCEEEEEEEEECCCccCCCCCCEEEEeCC
Confidence 99999999999999999999999998864
No 375
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.65 E-value=3.4e-15 Score=131.33 Aligned_cols=178 Identities=15% Similarity=0.212 Sum_probs=117.1
Q ss_pred eEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEec-----------------CCCcEEEeeC-----CCEEEcCCCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG-----------------SGGRRKIFEN-----GNLLISPVSR 151 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~~-----------------~~~~~~~~~~-----~~l~i~~v~~ 151 (505)
...+.+|++++|.|.+.+.| .+.+.|+++ +..+. ...++.+..+ .+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (256)
T 1nqb_A 9 AELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTS 88 (256)
T ss_dssp CEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCCh
Confidence 35789999999999998875 579999983 22210 1245555432 2699999999
Q ss_pred CCCEEEEEEEEcCCCc-----eeeeEEEEEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCC---eEEEEEe--CCE
Q psy14886 152 DDSGIYSCTATNVHGM-----DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD---VAYIWTH--NGV 221 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~-----~~~~~~l~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~---~~~~w~~--~~~ 221 (505)
+|+|.|.|.+.+..|. ....+.|.|...|.+. ..+....+..|+.++|.|.+.+.+.+. ..+.|++ ++.
T Consensus 89 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~-~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~ 167 (256)
T 1nqb_A 89 EDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELT-QTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQ 167 (256)
T ss_dssp GGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEE-EECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTS
T ss_pred hhCEEEEEEEeeccCccceeEEcCceeeeecccccEE-ecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCC
Confidence 9999999999988652 1223567776555433 335566788999999999998876541 3567988 454
Q ss_pred EecC----CC-CCcccCCee----eecCCeEEEecCCCCCCEEEEEEEEecCCc-EEEEEEEEEc
Q psy14886 222 RIGN----MD-LNELETPNI----NIDGGLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVE 276 (505)
Q Consensus 222 ~~~~----~~-~~~~~~~~~----~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~-~~~~~~l~v~ 276 (505)
.+.. .. .......++ ......|.|.++..+|+|.|+|.|.+..+. ......|.|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 168 SPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp CEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 3210 00 000000111 112347999999999999999999885433 2233456664
No 376
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.65 E-value=2.3e-15 Score=133.70 Aligned_cols=169 Identities=19% Similarity=0.239 Sum_probs=111.4
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEE--CCEE------------ecCC----CcEEEee----CCCEEEcCCCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKK--DGNI------------IGSG----GRRKIFE----NGNLLISPVSRDDS 154 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~--~g~~------------~~~~----~~~~~~~----~~~l~i~~v~~~d~ 154 (505)
..+.+.+|++++|.|.+. .+.+.+.|++ .+.. .... .++.+.. +.+|.|.+++.+|+
T Consensus 34 ~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 112 (268)
T 3pl6_D 34 SNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDS 112 (268)
T ss_dssp SEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGC
T ss_pred CEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccC
Confidence 557799999999999986 5677999998 2211 1111 4555543 33599999999999
Q ss_pred EEEEEEEEcC--CCceeeeEEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC
Q psy14886 155 GIYSCTATNV--HGMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 155 G~y~C~~~~~--~g~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~ 226 (505)
|.|.|.+.+. .........|.|.. +|.+....+....+..|+.++|.|.+.+.+++.+.+.|+++|..+...
T Consensus 113 G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~ 192 (268)
T 3pl6_D 113 AVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 192 (268)
T ss_dssp EEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTT
T ss_pred EEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCC
Confidence 9999999974 23333345677765 333333333333445689999999999977666688999999887543
Q ss_pred CCCcc--------cCCeeeecCCeEEEecCCCCC-CEEEEEEEEecCCc
Q psy14886 227 DLNEL--------ETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGK 266 (505)
Q Consensus 227 ~~~~~--------~~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~n~~g~ 266 (505)
..... .........+.|.+.....+| .|.|+|.|.|....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 193 VCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp EEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred eEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 11000 001111112356676666666 99999999987554
No 377
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.65 E-value=4.6e-16 Score=135.98 Aligned_cols=173 Identities=17% Similarity=0.218 Sum_probs=113.3
Q ss_pred EEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcE----EEeeCCCEEEcCCCCCCCEEEEEEEEcCCC-----cee
Q psy14886 99 TYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHG-----MDE 169 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~----~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g-----~~~ 169 (505)
..+.+|++++|.|.+.+ +.+.+.|+|+|..+...... ....++.|.|.+++.+|+|.|+|.+.+... ..+
T Consensus 16 ~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S 94 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPS 94 (257)
T ss_dssp SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCC
T ss_pred CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccC
Confidence 46889999999999875 46799999988644211000 001234699999999999999999986432 223
Q ss_pred eeEEEEEEeC--CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEec
Q psy14886 170 SKGRLIVLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247 (505)
Q Consensus 170 ~~~~l~v~~~--p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 247 (505)
..+.|.|... ++.+...+ ...+..|+.++|.|.+.+.+ ..+.|+++|..+....... ..........|.|.+
T Consensus 95 ~~~~L~V~~~~~~P~l~~~p-~~~V~~G~~vtL~C~~~~~~---~~~~w~k~g~~~~~~~~~~--~~~~~~~~~~l~I~~ 168 (257)
T 1b6u_A 95 DPLDIVITGLYEKPSLSAQP-GPTVLAGESVTLSCSSRSSY---DMYHLSREGEAHERRFSAG--PKVNGTFQADFPLGP 168 (257)
T ss_dssp CCEEEEEECSSCCCEEECSS-CTTCBTTCEEEEEEECSSCC---SEEEEEETTSSCEECCBCB--CCSSSCCBEEEEEEE
T ss_pred CCEEEecccCCCCcceEccC-CCccCCCCEEEEEEeCCCCC---cEEEEEECCcccCcccccc--cccCCceeEEEEecc
Confidence 4467777653 22222222 23578999999999987653 3678999986654321000 000001246789999
Q ss_pred CCCCCCEEEEEEEEecCC-----cEEEEEEEEEcCCCC
Q psy14886 248 ASFADAGEYECVVKSTVG-----KISTKTTVIVEGPPG 280 (505)
Q Consensus 248 ~~~~~~g~y~C~~~n~~g-----~~~~~~~l~v~~~p~ 280 (505)
++ |.|.|+|.+.+... ..+..+.|.|.++|.
T Consensus 169 v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 169 AT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp CC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred cc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 87 99999999987532 234567777777654
No 378
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.65 E-value=3.7e-16 Score=133.30 Aligned_cols=168 Identities=14% Similarity=0.251 Sum_probs=108.8
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEec----------------CCCcEEEeeC-----CCEEEcCCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG----------------SGGRRKIFEN-----GNLLISPVSRDD 153 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~~----------------~~~~~~~~~~-----~~l~i~~v~~~d 153 (505)
..+.+|++++|.|.+.+.+ .+.+.|+++ +.... ...++.+..+ .+|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 89 (210)
T 3d9a_H 10 SLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED 89 (210)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCccc
Confidence 4688999999999998875 479999984 32210 1245554431 279999999999
Q ss_pred CEEEEEEEEcCCCceeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeec-CCCCeEEEEEeCCEEecCCCC
Q psy14886 154 SGIYSCTATNVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDL 228 (505)
Q Consensus 154 ~G~y~C~~~~~~g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~~w~~~~~~~~~~~~ 228 (505)
+|.|.|.+.+.. .......|.|.. +|.+... +....+..|+.+.|.|.+.+. |.| +.+.|++++..+.....
T Consensus 90 ~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~~~~~~~~~ 166 (210)
T 3d9a_H 90 TATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEP-VTVTWNSGSLSSGVHTF 166 (210)
T ss_dssp CEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEE-CCTTSCCCSSEEEEEEEEEEEBSSC-CEEEEGGGTBCTTEEEC
T ss_pred CEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEe-cCCcccccCCcEEEEEEEeeEecCC-cEEEEeeCCcccceEEc
Confidence 999999998863 222235666653 2333322 222345678999999999987 443 47789998765321100
Q ss_pred CcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE
Q psy14886 229 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270 (505)
Q Consensus 229 ~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~ 270 (505)
............+.|.|.....++ |.|+|.|.|..|.....
T Consensus 167 ~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 167 PAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp CCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred CCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 000000111123468888887766 99999999998875433
No 379
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.65 E-value=8.8e-16 Score=117.76 Aligned_cols=104 Identities=18% Similarity=0.178 Sum_probs=84.3
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcC-CCCcEEEEeeecCceeeEEEEcCCcc
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 456 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~L~ 456 (505)
.+......+|.+|.++.+...+.++|.|.|++ +.+++++|++|.|+|+..+ ...|......... ..+.+.|.+|.
T Consensus 9 ~~~~~~~~~P~~P~~~~~~~~~~~sv~l~W~p--~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~--~~~~~~v~~L~ 84 (121)
T 1x4z_A 9 QPDHGRLSPPEAPDRPTISTASETSVYVTWIP--RGNGGFPIQSFRVEYKKLKKVGDWILATSAIPP--SRLSVEITGLE 84 (121)
T ss_dssp CCCSSSCCCCCCCCCCEEEECCSSEEEEECCC--CCCTTSCCCEEEEEEEESSSCCCCEEEEEEECT--TCCEEEEESCC
T ss_pred eeccCcCCCCccCCCCEEEEccCCEEEEEEEC--CCCCCCcceEEEEEEEECCCCCceEEeecccCC--CcCEEEECCCC
Confidence 34444556778999999988899999999996 6778889999999999987 6888865443222 34678899999
Q ss_pred ceeeEEEEEEEecCCCCCCCCceEEEeec
Q psy14886 457 YYTEYEVKVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 457 p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
|++.|.|||+|+|.+|.|++|+.....+.
T Consensus 85 p~t~Y~frV~A~n~~G~s~~S~~~~~v~~ 113 (121)
T 1x4z_A 85 KGISYKFRVRALNMLGESEPSAPSRPYVV 113 (121)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCCCCEEC
T ss_pred CCCEEEEEEEEEcCCCcCCCcCCCCCEEc
Confidence 99999999999999999999988764443
No 380
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.65 E-value=3.4e-16 Score=117.47 Aligned_cols=100 Identities=20% Similarity=0.217 Sum_probs=81.8
Q ss_pred CCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceee
Q psy14886 381 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460 (505)
Q Consensus 381 t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 460 (505)
|.+..| .+|.++++...+.++|.|.|++ +.+.+|.|++|+|+|+..+...|....... ..+.+.|.+|.|++.
T Consensus 3 T~~~~P-~~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~l~~L~p~t~ 75 (108)
T 2djs_A 3 SGSSGP-STVPIMHQVSATMRSITLSWPQ--PEQPNGIILDYEIRYYEKEHNEFNSSMARS----QTNTARIDGLRPGMV 75 (108)
T ss_dssp SCCCCC-CCCSCCEEEEECSSEEEEECCC--CSCCSSCEEEEEEEEEETTSCSTTCEEEEE----SSSEEEEESCCTTCE
T ss_pred cCCCCC-CCCcceEEEecCCCEEEEEECC--CCCCCCeEEEEEEEEEECCCCCcceeEEec----CccEEEEcCCCCCCE
Confidence 334444 5788999988889999999998 467888999999999998765554333322 346788999999999
Q ss_pred EEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 461 YEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 461 Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
|.|+|+|+|.+|.|++|+.+.+.|.+.
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 76 YVVQVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEEEEeCCEECCCCCCEEEEeCCC
Confidence 999999999999999999999988754
No 381
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=1.4e-15 Score=116.28 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=81.3
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCc----eEEEEEEEcCC--CCcEEEEeeecCceeeEEEE
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI----YYKIFWRKKND--TEFQSETLKEYGNVGIAVVR 451 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~----~Y~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 451 (505)
.+.+.+..|+.+|.++++...+.++|.|.|+++ ...++.+. +|+|+|+..+. ..|..... ..+.+.
T Consensus 10 ~~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p--~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~------~~~~~~ 81 (123)
T 2edd_A 10 TSVPDLSTPMLPPVGVQAVALTHDAVRVSWADN--SVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT------TSLSYT 81 (123)
T ss_dssp CSCSSCCCSSCCCEEEEEEEEETTEEEEEEECS--SSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE------SSSEEE
T ss_pred cCCCccCCCCCCCcceEEEEcCCCeEEEEecCC--CCCcccccCcCceEEEEEEECCCCCccEEEEeC------CceEEE
Confidence 345566788899999999999999999999973 34455554 99999998752 23332211 246789
Q ss_pred cCCccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 452 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 452 l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
|.+|+|++.|.|+|+|+|.+|.|++|+.+.++|.+.
T Consensus 82 v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 82 ATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp EESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred ecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 999999999999999999999999999999998764
No 382
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.64 E-value=3e-15 Score=131.47 Aligned_cols=166 Identities=17% Similarity=0.258 Sum_probs=108.8
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC-----EEe---------cCCCcEEEeeCC---CEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG-----NII---------GSGGRRKIFENG---NLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g-----~~~---------~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C 159 (505)
..+.+.+|++++|.|.+.+.|.+.+.|+++. ..+ ....++.....+ +|.|.+++.+|+|.|.|
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 91 (250)
T 3esu_F 12 SSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFC 91 (250)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEE
Confidence 5567899999999999999998999999842 111 012344333322 69999999999999999
Q ss_pred EEEcCCCceee-eEEEEEEeC------------------CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeC-
Q psy14886 160 TATNVHGMDES-KGRLIVLHG------------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN- 219 (505)
Q Consensus 160 ~~~~~~g~~~~-~~~l~v~~~------------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~- 219 (505)
.+.+..+.... ...|.|... +......+....+..|+.+.|.|.+.+.+.+...+.|+++
T Consensus 92 ~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 171 (250)
T 3esu_F 92 QQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQR 171 (250)
T ss_dssp EECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEEC
T ss_pred EEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEEC
Confidence 99987654332 355666543 1222233455678899999999999887644557789886
Q ss_pred -CEEecCC------C------CCcccCCeee----ecCCeEEEecCCCCCCEEEEEEEEe
Q psy14886 220 -GVRIGNM------D------LNELETPNIN----IDGGLLEITNASFADAGEYECVVKS 262 (505)
Q Consensus 220 -~~~~~~~------~------~~~~~~~~~~----~~~~~l~i~~~~~~~~g~y~C~~~n 262 (505)
+..+... . .......... ....+|.|.++..+|+|.|.|.+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 172 PGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp TTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 3222100 0 0000001111 1123699999999999999999987
No 383
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.64 E-value=3.4e-15 Score=130.71 Aligned_cols=169 Identities=20% Similarity=0.262 Sum_probs=111.0
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEE--------------CCEEecC----CCcEEEeeCC----CEEEcCCCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKK--------------DGNIIGS----GGRRKIFENG----NLLISPVSRDDS 154 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~--------------~g~~~~~----~~~~~~~~~~----~l~i~~v~~~d~ 154 (505)
..+.+.+|++++|.| ..+.+.+.+.|++ ++..... ..++.+...+ +|.|.+++.+|+
T Consensus 10 ~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 88 (245)
T 4ei6_B 10 SHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDS 88 (245)
T ss_dssp SEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGC
T ss_pred ceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHC
Confidence 456789999999999 5567788999998 2222211 1455554322 699999999999
Q ss_pred EEEEEEEEcCC----CceeeeEEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEec
Q psy14886 155 GIYSCTATNVH----GMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224 (505)
Q Consensus 155 G~y~C~~~~~~----g~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~ 224 (505)
|.|.|.+.+.. ........|.|.. +|.+....+....+..|+.+.|.|.+.+.+++.+.+.|+++|..+.
T Consensus 89 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~ 168 (245)
T 4ei6_B 89 AVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 168 (245)
T ss_dssp EEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECC
Confidence 99999999532 2233345677763 3433333333334456899999999998655556889999998886
Q ss_pred CCCCCccc--------CCeeeecCCeEEEecCCCCC-CEEEEEEEEecCCc
Q psy14886 225 NMDLNELE--------TPNINIDGGLLEITNASFAD-AGEYECVVKSTVGK 266 (505)
Q Consensus 225 ~~~~~~~~--------~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~n~~g~ 266 (505)
........ ........+.|.|.....+| .|.|+|.|.|....
T Consensus 169 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 169 SGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp TTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 53211000 00111112347777776667 89999999986554
No 384
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.64 E-value=1.1e-15 Score=117.72 Aligned_cols=109 Identities=18% Similarity=0.149 Sum_probs=85.1
Q ss_pred cCCCcCCCCCCCCCccCCCC-----CCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEe
Q psy14886 365 NELGYGEPSSPSPQYNTPAD-----KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 439 (505)
Q Consensus 365 n~~G~~~~s~~~~~~~t~~~-----~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~ 439 (505)
+..|.|++|.+. .+.|.+. .+|.+|.++++.... ++|.|.|++ +.+.+|.|++|+|+|+. +...+....+
T Consensus 2 t~~G~g~~S~~~-~~~T~~~~~~~~~~P~~P~~l~~~~~~-~sv~l~W~~--P~~~~g~i~~Y~v~y~~-~~~~~~~~~~ 76 (126)
T 1x5i_A 2 SSGSSGPATDWL-SAETFESDLDETRVPEVPSSLHVRPLV-TSIVVSWTP--PENQNIVVRGYAIGYGI-GSPHAQTIKV 76 (126)
T ss_dssp CSCCCCCCCCCC-CSCCCCTTSBCSSCCCSCSEEEEEEET-TEEEEEEEC--CSCTTBCCCEEEEEECS-SCGGGEEEEC
T ss_pred CCCccCCCCCCE-EeECccccCccCCCCCCCCeeEEEecC-CEEEEEEcC--CCCCCCCEeEEEEEEEc-CCCCceEEEe
Confidence 467889888875 6777765 244599999998776 999999998 45678999999999984 4334443333
Q ss_pred eecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEE
Q psy14886 440 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 482 (505)
Q Consensus 440 ~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~ 482 (505)
. ...+.+.|.+|.|++.|.|+|+|+|.+|.|+++.....
T Consensus 77 ~----~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~ 115 (126)
T 1x5i_A 77 D----YKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAV 115 (126)
T ss_dssp C----TTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEE
T ss_pred C----CCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEe
Confidence 2 24467899999999999999999999999999976443
No 385
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=4e-16 Score=136.11 Aligned_cols=171 Identities=17% Similarity=0.207 Sum_probs=110.6
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEECC--EEC---cC-CC-----CCCC-CCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRNG--ELL---NS-ET-----LPLE-DQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~~--~~l---~~-~~-----~~~~-~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+. +...+.|+|++ ..+ .. .. .... ..+|+.+. ..+|.|.+++ .+|
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D 91 (242)
T 1hxm_B 13 KTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVE-KQD 91 (242)
T ss_dssp EETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCC-GGG
T ss_pred ecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCC-ccc
Confidence 3589999999999875 56889999943 211 00 00 0000 34677653 3479999999 999
Q ss_pred CeEEEEEEEcccC-c-----e-EeeEEEEEEec------CCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEE
Q psy14886 61 PAMYQCRAKNQLK-T-----R-YSSAQLRVLTL------KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKK 125 (505)
Q Consensus 61 ~G~Y~C~~~~~~~-~-----~-~~~~~l~v~~~------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~ 125 (505)
+|.|.|.+.+... . . ...+.|.|... +|...+.. +....+.+|+.++|.|.+.+. |. +.+.|++
T Consensus 92 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~-p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 170 (242)
T 1hxm_B 92 IATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFL-PSIAETKLQKAGTYLCLLEKFFPDVIKIHWEE 170 (242)
T ss_dssp CEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCC-CCGGGGGSSSCEEEEEEEEEESSCCEEEEEEE
T ss_pred CEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEEC-CChhhcccCCCceEEEEEeeEECCCeEEEEEc
Confidence 9999999987531 1 1 12467777752 23333322 122235679999999999876 64 6999999
Q ss_pred CCE-EecCCC--cEEEeeC------CCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 126 DGN-IIGSGG--RRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 126 ~g~-~~~~~~--~~~~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
++. .+.... ... ..+ ..|.|.++.. | |.|+|.|.|..+.......+.+
T Consensus 171 ~~~~~l~~~~~~~~~-~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 171 KKSNTILGSQEGNTM-KTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp SSSCCCCCCEECCCE-ECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CCCEeecCcccccee-cCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 986 453211 111 112 2478877765 4 9999999998887655555544
No 386
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.64 E-value=7.9e-16 Score=135.64 Aligned_cols=180 Identities=17% Similarity=0.225 Sum_probs=115.2
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEEC--CE---Eec-------------CCCcEEEeeC-----CCEEEcCCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GN---IIG-------------SGGRRKIFEN-----GNLLISPVSRDD 153 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~---~~~-------------~~~~~~~~~~-----~~l~i~~v~~~d 153 (505)
..+.+|++++|.|.+.+.| .+.+.|+++ +. .+. ...++.+..+ .+|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (257)
T 1f3r_B 10 GLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDD 89 (257)
T ss_dssp SEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTC
T ss_pred ccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCccc
Confidence 3588999999999998875 679999985 21 110 1245555432 269999999999
Q ss_pred CEEEEEEEEcCCC-------ce--eeeEEEEEEeCC--------------eeeeeCCCceEEEeeccEEEEEEeeecCCC
Q psy14886 154 SGIYSCTATNVHG-------MD--ESKGRLIVLHGP--------------SYYEQLPPKITIAAHRNLQLRCSAHTEELL 210 (505)
Q Consensus 154 ~G~y~C~~~~~~g-------~~--~~~~~l~v~~~p--------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 210 (505)
+|.|.|.|.+..| .. ...+.|.|...+ ..+...+....+..|+.++|.|.+.+.+.+
T Consensus 90 sG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 169 (257)
T 1f3r_B 90 TGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINN 169 (257)
T ss_dssp CEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBT
T ss_pred CEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCC
Confidence 9999999999854 11 123567776543 112223445567889999999999887765
Q ss_pred CeEEEEEe--CCEEecC----CC-CCcccCCee----eecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEcCCC
Q psy14886 211 DVAYIWTH--NGVRIGN----MD-LNELETPNI----NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 279 (505)
Q Consensus 211 ~~~~~w~~--~~~~~~~----~~-~~~~~~~~~----~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~~~p 279 (505)
.+.|++ ++..+.. .. ........+ ......|.|.++..+|+|.|.|.|.|..........|.|...+
T Consensus 170 --~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 170 --YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAAE 247 (257)
T ss_dssp --CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSSC
T ss_pred --cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCCC
Confidence 466988 4432210 00 000000111 1123479999999999999999999865112223455565444
Q ss_pred C
Q psy14886 280 G 280 (505)
Q Consensus 280 ~ 280 (505)
.
T Consensus 248 ~ 248 (257)
T 1f3r_B 248 Q 248 (257)
T ss_dssp C
T ss_pred c
Confidence 3
No 387
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.64 E-value=4.4e-16 Score=154.68 Aligned_cols=163 Identities=17% Similarity=0.219 Sum_probs=113.6
Q ss_pred CCCCceEEEEEE-eccCCCeEEEEECCEECcCCCCCC-----CCCCcEEE-ECCeEEEEcCCCCCCCeEEEEEEEcccCc
Q psy14886 2 DNQADLTWTCEA-FGVPDVTYSWFRNGELLNSETLPL-----EDQDRYFI-QDNVLTIRYLNPERDPAMYQCRAKNQLKT 74 (505)
Q Consensus 2 ~~G~~~~l~C~~-~~~p~~~~~W~~~~~~l~~~~~~~-----~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~ 74 (505)
.+|++++|.|.+ .+.|.+.+.|+|++..+....... ...+|... .+++|.|.+++ .+|+|.|+|.+.|..+.
T Consensus 379 ~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~-~~D~G~Y~C~~~n~~~~ 457 (581)
T 3o3u_N 379 RIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVG-IQDEGIFRCQAMNRNGK 457 (581)
T ss_dssp ETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCC-GGGCEEEEEEEECTTSC
T ss_pred ecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccc-cccCeEEEEEEEcCCCc
Confidence 579999999999 678889999999876332110000 01234333 45689999999 99999999999998887
Q ss_pred e-EeeEEEEEEecCCCccCCCCCceEEeeCCC-eEEEEeecCC-CCCCeEEEEECCEEecCCC-cEEEe----e---C--
Q psy14886 75 R-YSSAQLRVLTLKPSFKKRPLESETYAGEGG-NVTIFCNPEA-APKPKFVWKKDGNIIGSGG-RRKIF----E---N-- 141 (505)
Q Consensus 75 ~-~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~-~v~l~C~~~~-~p~~~i~W~~~g~~~~~~~-~~~~~----~---~-- 141 (505)
. ...+.|.|...+....+..... . +.+|+ .+.|.|.+.+ .|.+.++|+++|..+.... +..+. . .
T Consensus 458 ~~~~~~~l~V~~~~~~p~i~~~~~-~-~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~ 535 (581)
T 3o3u_N 458 ETKSNYRVRVYQIPGKPEIVDSAS-E-LTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGL 535 (581)
T ss_dssp EEEEEEEEEEEBCCCCCEEESCCS-E-ECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCC
T ss_pred eeEEEEEEEEEcCCCCCEEEcCCc-c-cccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCce
Confidence 6 5678888886333332222222 2 44554 4567999988 5889999999999886432 22221 1 1
Q ss_pred ----CCEEEcCCC-CCCCEEEEEEEEcCCCc
Q psy14886 142 ----GNLLISPVS-RDDSGIYSCTATNVHGM 167 (505)
Q Consensus 142 ----~~l~i~~v~-~~d~G~y~C~~~~~~g~ 167 (505)
.+|.|.++. .++.|.|+|.|.|....
T Consensus 536 y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 536 FTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred EEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 248999988 55588999999998643
No 388
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.64 E-value=1.2e-15 Score=116.25 Aligned_cols=107 Identities=20% Similarity=0.266 Sum_probs=86.4
Q ss_pred CCCCCCCCccCC-CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEE
Q psy14886 371 EPSSPSPQYNTP-ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 449 (505)
Q Consensus 371 ~~s~~~~~~~t~-~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (505)
++|... .+.|. +..++.+|.++.+...+.++|.|.|++ +...++.|++|+|+|+..+...|..... ..+.
T Consensus 2 ~~S~~~-~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~------~~~~ 72 (116)
T 1x5g_A 2 SSGSSG-RVETQPEVQLPGPAPNLRAYAASPTSITVTWET--PVSGNGEIQNYKLYYMEKGTDKEQDVDV------SSHS 72 (116)
T ss_dssp CCCCCC-CCSSCCCSSCCCCCSSCEEEEEETTEEEEECCC--CSCCSSCCSEEEEEEEETTCCCCCCEEE------CSSE
T ss_pred CCccCe-EEEcCCCCCCCcCCCccEEEecCCCEEEEEEeC--CCCCCCcccEEEEEEEECCCCccEEEec------CCce
Confidence 344443 56664 335567999999988889999999998 4457889999999999988666643322 2467
Q ss_pred EEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 450 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 450 ~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
+.|.+|.|++.|.|+|+|+|..|.|++|+.+.++|.+
T Consensus 73 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 109 (116)
T 1x5g_A 73 YTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLS 109 (116)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCC
T ss_pred EEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCC
Confidence 8999999999999999999999999999999988864
No 389
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=3.7e-16 Score=135.86 Aligned_cols=173 Identities=18% Similarity=0.197 Sum_probs=112.0
Q ss_pred ceEEeeCCCeEEEEeecCCCC-CC-eEEEEECC--EEe------------cCCCcEEEeeC---CCEEEcCCCCCCCEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-KP-KFVWKKDG--NII------------GSGGRRKIFEN---GNLLISPVSRDDSGIY 157 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-~~-~i~W~~~g--~~~------------~~~~~~~~~~~---~~l~i~~v~~~d~G~y 157 (505)
....+.+|++++|.|.+.+.+ .+ .+.|++++ ..+ ....++..... .+|.|.+++.+|+|.|
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 106 (234)
T 2j6e_L 27 PSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADY 106 (234)
T ss_dssp SCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEE
T ss_pred CcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEE
Confidence 445688999999999998764 34 79999852 211 01234444322 2699999999999999
Q ss_pred EEEEEcCCCc---eeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCC-
Q psy14886 158 SCTATNVHGM---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN- 229 (505)
Q Consensus 158 ~C~~~~~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~- 229 (505)
+|.+.+..+. ....+.|.|.. +|.+....+ ......|+.+.|.|.+.+.+++.+.+.|+++|..+......
T Consensus 107 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~-~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 107 YCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPP-SSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECC-CHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCC-ChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCcccc
Confidence 9999998772 22234555532 232222222 11223477999999999876544688899999987543110
Q ss_pred --cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE
Q psy14886 230 --ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270 (505)
Q Consensus 230 --~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~ 270 (505)
...........+.|.|.....+|.|.|+|.|.|..+....+
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 228 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 228 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEE
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEe
Confidence 00000111123467888888899999999999987764433
No 390
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.64 E-value=2.8e-16 Score=137.66 Aligned_cols=167 Identities=17% Similarity=0.250 Sum_probs=105.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEECc----C---CCCCCCCCCcEEEE-----CCeEEEEcCCCCCCCeEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GELLN----S---ETLPLEDQDRYFIQ-----DNVLTIRYLNPERDPAMYQC 66 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~----~---~~~~~~~~~~~~~~-----~~~L~i~~~~~~~d~G~Y~C 66 (505)
+.+|++++|.|.+.+.+.+.+.|+|. +..+. . ........+|+.+. ..+|.|.+++ .+|+|.|+|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~-~~D~G~Y~C 91 (245)
T 3nfj_J 13 QPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL-LSDSGFYLC 91 (245)
T ss_dssp EETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC-GGGCEEEEE
T ss_pred ecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC-hhhCEEEEE
Confidence 35899999999999888899999992 11100 0 00001123455442 2379999999 999999999
Q ss_pred EEEcccC-----ce-EeeEEEEEEec-----CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecCC
Q psy14886 67 RAKNQLK-----TR-YSSAQLRVLTL-----KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGSG 133 (505)
Q Consensus 67 ~~~~~~~-----~~-~~~~~l~v~~~-----~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~~ 133 (505)
.+.+..+ .. ...+.|.|... +|.+.... +....+.+|+.++|.|.+.+. |.+ .+.|+++|..+...
T Consensus 92 ~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 170 (245)
T 3nfj_J 92 AWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFE-PSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSG 170 (245)
T ss_dssp EEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEE-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeec-CCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCC
Confidence 9998322 12 23456667641 23222211 011123458999999999884 444 79999999988653
Q ss_pred CcEEEe--------eCC------CEEEcCCCCCC-CEEEEEEEEcCCCcee
Q psy14886 134 GRRKIF--------ENG------NLLISPVSRDD-SGIYSCTATNVHGMDE 169 (505)
Q Consensus 134 ~~~~~~--------~~~------~l~i~~v~~~d-~G~y~C~~~~~~g~~~ 169 (505)
...... .++ .|.|......| .|.|+|.|.+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 171 VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred cccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 211100 122 46777777777 7799999998754443
No 391
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.64 E-value=1.3e-16 Score=135.50 Aligned_cols=164 Identities=14% Similarity=0.135 Sum_probs=104.6
Q ss_pred eeCCCeEEEEeecCCCC----CCeEEEEECCEEecCCCc--------EEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 101 AGEGGNVTIFCNPEAAP----KPKFVWKKDGNIIGSGGR--------RKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 101 v~~g~~v~l~C~~~~~p----~~~i~W~~~g~~~~~~~~--------~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
+.+|++++|.|.+.+.+ ...|.|++++..+..... ........|.|.+++.+|+|.|+|.|.+..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 67899999999998774 249999999977642110 011112359999999999999999999987754
Q ss_pred ee--eEEE--EEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc---ccCCeeeecCC
Q psy14886 169 ES--KGRL--IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE---LETPNINIDGG 241 (505)
Q Consensus 169 ~~--~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~---~~~~~~~~~~~ 241 (505)
.. .+.+ .+..+|.+........ ...|+.+.|.|.+.+.+++.+.+.|+++|..+....... ..... ....+
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~-~~~~s 172 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGS-YFVYS 172 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSC-EEEEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCC-EEEEE
Confidence 22 2222 2333454433322222 224889999999998655556888999998774321000 00000 01112
Q ss_pred eEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 242 LLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 242 ~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.|.+...+.++.|.|+|.|.|....
T Consensus 173 ~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 173 KLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred EEEECHHHcCCCCEEEEEEECCCCC
Confidence 3455555556789999999997653
No 392
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.64 E-value=2e-16 Score=138.97 Aligned_cols=170 Identities=19% Similarity=0.298 Sum_probs=107.5
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEECC--E---EC---cCC----CCCCCCCCcEEEEC------CeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRNG--E---LL---NSE----TLPLEDQDRYFIQD------NVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~~--~---~l---~~~----~~~~~~~~~~~~~~------~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+. +...+.|+|.. . .+ ... .......+|+.+.. .+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 90 (253)
T 3liz_H 12 VQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK-SED 90 (253)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC-GGG
T ss_pred ECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC-hhh
Confidence 4689999999999763 35789999942 1 11 000 00011235665531 349999999 999
Q ss_pred CeEEEEEEEccc----CceEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEec
Q psy14886 61 PAMYQCRAKNQL----KTRYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIG 131 (505)
Q Consensus 61 ~G~Y~C~~~~~~----~~~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~ 131 (505)
+|.|.|.+.+.. ......+.|.|.. .+|.+.... ....+..|+.++|.|.+.+ .|.+ .+.|++++..+.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~ 168 (253)
T 3liz_H 91 TAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 168 (253)
T ss_dssp CEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEEC--C------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred CEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEec--CCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecc
Confidence 999999998752 1222345677752 233332211 2223567999999999988 5666 899999886321
Q ss_pred --------CCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEEE
Q psy14886 132 --------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 176 (505)
Q Consensus 132 --------~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~v 176 (505)
..+.+. ..+.|.|..+..+| |.|+|.|.|..+.......+.+
T Consensus 169 ~~~~~~~~~~g~~~--~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 169 VHTFPAVLQSDLYT--LSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp EEECCCEEETTEEE--EEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred eEeCCccccCCeEE--EEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecC
Confidence 112221 12468899998889 9999999998776665555544
No 393
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.64 E-value=8.8e-16 Score=117.63 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=86.7
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeee-ccccccEEEEEEeCCccccCCCCceEEEEEEEcCC-CCcEEEEeeecCce
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGG-GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNV 445 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~-~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~ 445 (505)
|.|++|... .+.|....| .+|.++.+. ....++|.|.|++ |..+++.+|++|.|+|+..+. ..|......
T Consensus 1 G~s~~S~~~-~~~t~~~~P-~~P~~~~~~~~~~~~sv~l~W~~-p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~~~----- 72 (120)
T 2crm_A 1 GSSGSSGVV-EFTTCPDKP-GIPVKPSVKGKIHSHSFKITWDP-PKDNGGATINKYVVEMAEGSNGNKWEMIYSG----- 72 (120)
T ss_dssp CCCTTCSCC-SCCSCCCCC-CCCCCCEEEEEEETTEEEEECCC-CTTCCSSCCCEEEEEEEESSSSCCCEEEECS-----
T ss_pred CCCCCcCCE-EEEeCCCCC-CCCCCCEEeeccCCCEEEEEECC-CCcCCCCeeeEEEEEEccCCCCcCCEEEEec-----
Confidence 567777775 555655555 567776665 6678899999998 344456789999999999875 578755321
Q ss_pred eeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 446 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 446 ~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
..+.+.+.+|.|++.|.|||+|+|.+|.|++|+.+.+.|.+
T Consensus 73 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 73 ATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp SCSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred cccEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCC
Confidence 24578999999999999999999999999999998887753
No 394
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.63 E-value=1.5e-16 Score=137.88 Aligned_cols=163 Identities=12% Similarity=0.189 Sum_probs=103.6
Q ss_pred CCCCCceEEEEEEecc---CCC-eEEEEECCEECcCCCC--C-CCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccC
Q psy14886 1 MDNQADLTWTCEAFGV---PDV-TYSWFRNGELLNSETL--P-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLK 73 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~---p~~-~~~W~~~~~~l~~~~~--~-~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~ 73 (505)
|.+|++++|.|.+.+. |.+ .|.|+|++..+..... . ....+++. ..++|.|.+++ .+|+|.|+|.+.+..+
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~-~~s~L~I~~~~-~~D~g~Y~C~~~~~~~ 106 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLR-SVSELPIVERD-WLNGKTFKCKVNSGAF 106 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEE-EEEEEECCHHH-HHTTCCEEEEEECSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEE-EEEEEEEEhhH-ccCCCeEEEEEecccC
Confidence 4689999999999886 754 8999998866542100 0 01122332 33589999999 9999999999998876
Q ss_pred ceEeeEEEEE---EecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCCC--cEEEeeCCCEE-
Q psy14886 74 TRYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGG--RRKIFENGNLL- 145 (505)
Q Consensus 74 ~~~~~~~l~v---~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~~--~~~~~~~~~l~- 145 (505)
.......+.. ...+|.+.+.+.... ...|+.++|.|.+.|. |. ..|.|+++|..+.... +.....++++.
T Consensus 107 ~~~~~~~v~~~~~~~~~P~v~v~~~~~~--~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~ 184 (239)
T 1i1c_A 107 PAPIEKSISKPEGTPRGPQVYTMAPPKE--EMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFL 184 (239)
T ss_dssp SSCEEEEECCCSSCCBCCEEEEECCCGG--GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEE
T ss_pred CCCcEEEEecCCCCCcCCEEEEECCChH--HhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEE
Confidence 5322222211 112444433332211 2357899999999884 54 4899999999875321 11223344433
Q ss_pred -----EcCCCCCCCEEEEEEEEcCCCc
Q psy14886 146 -----ISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 146 -----i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
|......|.|.|+|.|.|....
T Consensus 185 ~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 185 YSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 3333335689999999987543
No 395
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.63 E-value=1.7e-16 Score=135.61 Aligned_cols=168 Identities=19% Similarity=0.218 Sum_probs=112.2
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEEec------------CCCcEEEeeC---CCEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIG------------SGGRRKIFEN---GNLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~~~------------~~~~~~~~~~---~~l~i~~v~~~d~G~y~C 159 (505)
....+.+|++++|.|.+.+.|.+.+.|+++ |..+. ...++..... ..|.|.+++.+|+|.|+|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 86 (212)
T 1nfd_E 7 SSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYC 86 (212)
T ss_dssp SEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEE
T ss_pred CeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEE
Confidence 456789999999999998887778999984 33221 1244444332 269999999999999999
Q ss_pred EEEcCCC-ce--eeeEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCc---
Q psy14886 160 TATNVHG-MD--ESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE--- 230 (505)
Q Consensus 160 ~~~~~~g-~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~--- 230 (505)
.+.|..+ .. .....|.|.. .++.+...+.......|+.+.|.|.+.+.+++.+.+.|+++|..+.......
T Consensus 87 ~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 166 (212)
T 1nfd_E 87 LSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPS 166 (212)
T ss_dssp EEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCB
T ss_pred EEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCce
Confidence 9997322 21 2234566642 2222222222233456889999999998754446788999999886532110
Q ss_pred -ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 231 -LETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 231 -~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.... ....+.|.|..+..+|.|.|+|.|.|..+.
T Consensus 167 ~~~~~--~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 167 KQGQN--YMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CSSSC--EEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ecCCC--ceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 0011 111245778888889999999999998775
No 396
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.63 E-value=4.6e-16 Score=116.42 Aligned_cols=99 Identities=16% Similarity=0.162 Sum_probs=79.8
Q ss_pred CCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEE
Q psy14886 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463 (505)
Q Consensus 384 ~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~ 463 (505)
..|+.+|....+...+.++|.|.|++ |..+++.+|++|.|+|+..+...|...... ....+.+.+.+|.|++.|.|
T Consensus 8 ~~~p~~P~~P~v~~v~~~sv~L~W~~-P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~---~~~~~~~~v~~L~p~t~Y~f 83 (112)
T 1bpv_A 8 SSPIDPPGKPVPLNITRHTVTLKWAK-PEYTGGFKITSYIVEKRDLPNGRWLKANFS---NILENEFTVSGLTEDAAYEF 83 (112)
T ss_dssp -CCCCCCCCCEEEEEETTEEEEECCC-CSCCTTCCCSCCEEEEEETTSCCCEECCCS---CCCSSEEEECSCCSSCCEEE
T ss_pred CCCCCCCCCCEEEEeeCCEEEEEECC-CCcCCCCcccEEEEEEEECCCCceEEeecc---cCccCEEEECCCCCCCEEEE
Confidence 45666777777777889999999997 355667789999999999887888754321 12345788999999999999
Q ss_pred EEEEecCCCC-CCCCceEEEeecc
Q psy14886 464 KVQAINDVGP-GPESEVVTIWHDP 486 (505)
Q Consensus 464 ~v~a~n~~G~-g~~s~~~~~~t~p 486 (505)
||.|+|.+|. |++|+.+...|..
T Consensus 84 rV~A~N~~G~~s~~S~~~~~~t~~ 107 (112)
T 1bpv_A 84 RVIAKNAAGAISPPSEPSDAITCR 107 (112)
T ss_dssp EEEEECTTSCEEEEEEEEEEECSC
T ss_pred EEEEEECCCCCCCCCCCCCCEEeC
Confidence 9999999997 9999988887754
No 397
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=8.1e-16 Score=115.46 Aligned_cols=95 Identities=17% Similarity=0.204 Sum_probs=77.6
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcC-C--CCcEEEEeeecCceeeEEEEcCCcccee
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-D--TEFQSETLKEYGNVGIAVVRIPSEFYYT 459 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~~L~p~~ 459 (505)
+..| .+|.++++...+.++|.|.|++ +...+|.|++|+|+|+..+ . ..|.... . ..+.+.|.+|.|++
T Consensus 5 ~~~P-~~p~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~--~----~~~~~~i~~L~p~t 75 (109)
T 2e7h_A 5 SSGP-PAVSDIRVTRSSPSSLSLAWAV--PRAPSGAVLDYEVKYHEKGAEGPSSVRFLK--T----SENRAELRGLKRGA 75 (109)
T ss_dssp CCSS-CCCCCCEEEEEETTEEEEECCC--CCCSSSCCCEEEEEEEETTCCSTTTSEEEE--E----SSSEEEEESCCTTS
T ss_pred CCCC-CCCCccEEEecCCCEEEEEeCC--CCCCCCcEeEEEEEEEECCCCCCceeEEEc--c----CCCEEEECCCCCCC
Confidence 4444 5688999998999999999998 3578899999999999876 2 2233222 1 23478899999999
Q ss_pred eEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 460 EYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 460 ~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 102 (109)
T 2e7h_A 76 SYLVQVRARSEAGYGPFGQEHHSQTQL 102 (109)
T ss_dssp CEEEEEEEECSSCBCCCCSCEECCCCC
T ss_pred eEEEEEEEEeCCccCCCCCCEEEEcCC
Confidence 999999999999999999999998875
No 398
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.63 E-value=2.6e-15 Score=131.40 Aligned_cols=171 Identities=16% Similarity=0.189 Sum_probs=110.9
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEEe--------------cCCCcEEEee----CCCEEEcCCCCCCCEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNII--------------GSGGRRKIFE----NGNLLISPVSRDDSGI 156 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~~--------------~~~~~~~~~~----~~~l~i~~v~~~d~G~ 156 (505)
..+.+.+|++++|.|.+.+.+.+.+.|++. +... ....++.+.. +.+|.|.+++.+|+|.
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~ 88 (245)
T 3nfj_J 9 ATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGF 88 (245)
T ss_dssp SEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEE
T ss_pred ceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEE
Confidence 456789999999999999888899999982 2110 0112333332 2259999999999999
Q ss_pred EEEEEEcCCC------ceeeeEEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEec
Q psy14886 157 YSCTATNVHG------MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224 (505)
Q Consensus 157 y~C~~~~~~g------~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~ 224 (505)
|.|.+.+..| .......|.|.. +|.+....+....+..|+.+.|.|.+.+.+++.+.+.|+++|..+.
T Consensus 89 Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~ 168 (245)
T 3nfj_J 89 YLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVH 168 (245)
T ss_dssp EEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECC
Confidence 9999998322 222335677764 3333322222223345889999999999766667889999999886
Q ss_pred CCCCCccc--------CCeeeecCCeEEEecCCCCC-CEEEEEEEEecCCcE
Q psy14886 225 NMDLNELE--------TPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKI 267 (505)
Q Consensus 225 ~~~~~~~~--------~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~n~~g~~ 267 (505)
........ ........+.|.|......| .|.|+|.|.|.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 169 SGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp TTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred CCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 53211000 01111112356777666666 779999999876543
No 399
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=3e-15 Score=130.64 Aligned_cols=166 Identities=18% Similarity=0.218 Sum_probs=111.5
Q ss_pred ceEEeeCCCeEEEEeecCCCC----CCeEEEEEC--CEE---ec---------CCCcEEEeeCC---CEEEcCCCCCCCE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP----KPKFVWKKD--GNI---IG---------SGGRRKIFENG---NLLISPVSRDDSG 155 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p----~~~i~W~~~--g~~---~~---------~~~~~~~~~~~---~l~i~~v~~~d~G 155 (505)
..+.+.+|++++|.|.+.+.| .+.+.|+++ +.. +. ...++.+...+ +|.|.+++.+|+|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (240)
T 1moe_A 9 ASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVA 88 (240)
T ss_dssp SEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCE
Confidence 456789999999999999887 779999985 221 10 12344443322 6999999999999
Q ss_pred EEEEEEEcCCCc-eeeeEEEEEEeCC-----eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeC--CEEecC--
Q psy14886 156 IYSCTATNVHGM-DESKGRLIVLHGP-----SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIGN-- 225 (505)
Q Consensus 156 ~y~C~~~~~~g~-~~~~~~l~v~~~p-----~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~~~~-- 225 (505)
.|+|.+.+..+. ....+.|.|...+ ......+....+..|+.+.|.|.+.+.+.+...+.|+++ +..+..
T Consensus 89 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~ 168 (240)
T 1moe_A 89 TYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIG 168 (240)
T ss_dssp EEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEE
T ss_pred EEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEE
Confidence 999999988654 3344677776542 223333556678899999999999988754456779884 211100
Q ss_pred -----CCC-----CcccCCeeee----cCCeEEEecCCCCCCEEEEEEEEe
Q psy14886 226 -----MDL-----NELETPNINI----DGGLLEITNASFADAGEYECVVKS 262 (505)
Q Consensus 226 -----~~~-----~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~n 262 (505)
... .......... ....|.|.++..+|+|.|.|.|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 169 RIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 000 0000011111 124799999999999999999984
No 400
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.63 E-value=9.5e-16 Score=117.97 Aligned_cols=100 Identities=13% Similarity=0.144 Sum_probs=80.1
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEE---cCCCCcEEEEeeecCceeeEEEEcCCcccee
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 459 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~ 459 (505)
+..+|.+|.++.+.....++|.|.|.+ +.+++++|++|.|+|+. .+...|....... .....+.+.+.+|.|++
T Consensus 14 ~~~~P~~P~~l~~~~~~~~sv~l~W~p--~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~-~~~~~~~~~v~~L~p~t 90 (124)
T 1wis_A 14 PPELPGPPTNLGISNIGPRSVTLQFRP--GYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLS-NEPDARSMEVPDLNPFT 90 (124)
T ss_dssp CCCCCCCCEEEEEESCCSSCEEEEEEC--CCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEE-SCTTCSEEEECSCCTTS
T ss_pred CCCCCccCCCCEEEEecCCEEEEEEEC--CCCCCCcccEEEEEEEECCCCCCCCCeEeeeEc-cCCCceEEEeCCCCCCC
Confidence 344567999999998899999999977 56888999999999998 3567787544321 11234678999999999
Q ss_pred eEEEEEEEecCCCCCCCCceEE-Eeec
Q psy14886 460 EYEVKVQAINDVGPGPESEVVT-IWHD 485 (505)
Q Consensus 460 ~Y~~~v~a~n~~G~g~~s~~~~-~~t~ 485 (505)
.|.|||.|+|.+|.|++|+... +.|.
T Consensus 91 ~Y~frV~A~N~~G~s~~S~~~~~~~T~ 117 (124)
T 1wis_A 91 CYSFRMRQVNIVGTSPPSQPSRKIQTL 117 (124)
T ss_dssp EECCCCEEECSSCBCCCCCCCCCEECC
T ss_pred EEEEEEEEEECCccCCCcCCccceEcC
Confidence 9999999999999999998754 4554
No 401
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.63 E-value=1.1e-15 Score=116.64 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=88.2
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCC-CCcEEEEeeecCcee
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVG 446 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~ 446 (505)
|.|.+|... .+.|....| .+|.++.+...+.++|.|.|++ +.+.+++|++|.|+|+..+. ..|...... .
T Consensus 1 G~s~~S~~~-~~~t~~~~P-~~P~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-----~ 71 (118)
T 1x3d_A 1 GSSGSSGAE-IFTTLSCEP-DIPNPPRIANRTKNSLTLQWKA--PSDNGSKIQNFVLEWDEGKGNGEFCQCYMG-----S 71 (118)
T ss_dssp CCCCCCCCC-CCCCCCSCC-CCCCCCEEEEEETTEEEEECCC--CCCCSSCEEEEEEEECTTTSSSCCEEEEEE-----S
T ss_pred CCCCCCcCE-EEEcCCCCC-cCCCCcEEeccCCCEEEEEECC--CCCCCCcceEEEEEEecCCCCCCeEEeecc-----C
Confidence 566667664 555655554 6888899888889999999998 44678899999999998764 678654322 2
Q ss_pred eEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 447 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 447 ~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
.+.+.+.+|.|++.|.|||+|+|.+|.|++|+.+.+.|.+
T Consensus 72 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~ 111 (118)
T 1x3d_A 72 QKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSG 111 (118)
T ss_dssp CSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSC
T ss_pred CcEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCC
Confidence 3578899999999999999999999999999999988764
No 402
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.63 E-value=1.8e-16 Score=134.83 Aligned_cols=162 Identities=14% Similarity=0.261 Sum_probs=95.8
Q ss_pred CCCCceEEEEEEeccC----CCeEEEEECCEECcCCCC---CCCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCc
Q psy14886 2 DNQADLTWTCEAFGVP----DVTYSWFRNGELLNSETL---PLEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 74 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~p----~~~~~W~~~~~~l~~~~~---~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~ 74 (505)
.+|++++|.|.+.|.+ ...|.|+|++.++..... .....+.+.+. +.|.|.... ..|+|.|+|.|.|..+.
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~-~~l~i~~~d-~~d~g~Y~C~a~n~~~~ 93 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVV-SVLTVLHQD-WLNGKEYKCKVSNKALP 93 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEE-EEEECCHHH-HHTTCCEEEEEECTTSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEE-EEEEEEHHH-ccCCceEEEEEEcCcCC
Confidence 6899999999998864 359999999987753210 00011122111 123333333 34599999999988765
Q ss_pred eEeeEEEEE---EecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCCC--cEEEeeCCCE---
Q psy14886 75 RYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGG--RRKIFENGNL--- 144 (505)
Q Consensus 75 ~~~~~~l~v---~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~~--~~~~~~~~~l--- 144 (505)
......+.. ...+|.+.+.+.... ...|..+.|.|.+.|. |. +.|.|+++|..+.... ......++++
T Consensus 94 ~~~~~~v~~~~~~~~~P~v~~~~~~~~--~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~ 171 (207)
T 1l6x_A 94 APIEKTISKAKGQPREPQVYTLPPSRD--ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLY 171 (207)
T ss_dssp SCEEEEECCCCSCCBCCEEEEECCCGG--GGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEE
T ss_pred cceEEEeccCCCCCcCCEEEEECCChH--HhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEE
Confidence 422222311 112444433221111 2246679999999885 54 4999999999875321 1122334443
Q ss_pred ---EEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 145 ---LISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 145 ---~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
.+......|.|.|+|.|.|....
T Consensus 172 s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 172 SKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 33343446799999999987543
No 403
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.63 E-value=4.7e-16 Score=138.90 Aligned_cols=166 Identities=17% Similarity=0.290 Sum_probs=106.5
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EECc------C----CCCCCCCCCcEEEEC-----CeEEEEcCCCCCCCeE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELLN------S----ETLPLEDQDRYFIQD-----NVLTIRYLNPERDPAM 63 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l~------~----~~~~~~~~~~~~~~~-----~~L~i~~~~~~~d~G~ 63 (505)
+.+|++++|.|.+.+.+.+.+.|+|++ ..+. . ........+|+.+.. .+|.|.+++ .+|+|.
T Consensus 36 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~-~~D~G~ 114 (279)
T 2wbj_D 36 SKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAH-PEDSSF 114 (279)
T ss_dssp EETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCC-GGGCEE
T ss_pred ecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCC-ccCCEE
Confidence 358999999999988788999999964 1110 0 000001246776642 389999999 999999
Q ss_pred EEEEEEcccC----c--eEeeEEEEEEec-----CCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEe
Q psy14886 64 YQCRAKNQLK----T--RYSSAQLRVLTL-----KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNII 130 (505)
Q Consensus 64 Y~C~~~~~~~----~--~~~~~~l~v~~~-----~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~ 130 (505)
|+|.+.+..+ . ....+.|.|... +|.+.+.. +....+.+|+.++|.|.+.+. |. +.+.|+++|+.+
T Consensus 115 Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l 193 (279)
T 2wbj_D 115 YICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 193 (279)
T ss_dssp EEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEE-CCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEEC
T ss_pred EEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEEC-CCcccccCCCceEEEEEEeeEcCCCcEEEEEECCEEC
Confidence 9999998421 1 112356777641 33332211 011123468999999999886 43 699999999987
Q ss_pred cCCCcEE------E--eeCCC------EEEcCCCCC-CCEEEEEEEEcCCCce
Q psy14886 131 GSGGRRK------I--FENGN------LLISPVSRD-DSGIYSCTATNVHGMD 168 (505)
Q Consensus 131 ~~~~~~~------~--~~~~~------l~i~~v~~~-d~G~y~C~~~~~~g~~ 168 (505)
....... . ..+++ |.|.+.... +.|.|+|.|.|.....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 194 HSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp CTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred CCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 6432111 0 02222 677776665 4778999999875443
No 404
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.63 E-value=1.6e-15 Score=114.44 Aligned_cols=102 Identities=19% Similarity=0.173 Sum_probs=82.1
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccc
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 457 (505)
.+.|.+..| .+|.++.+...+.++|.|.|++ +.+.++.|++|+|+|+..+...+....... ..+.+.|.+|.|
T Consensus 3 ~~~T~~~~P-~~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p 75 (111)
T 1x5l_A 3 SGSSGQAAP-SQVVVIRQERAGQTSVSLLWQE--PEQPNGIILEYEIKYYEKDKEMQSYSTLKA----VTTRATVSGLKP 75 (111)
T ss_dssp CCCCSCCCC-CCCCCEECSCBCSSCEEEEECC--CSCCCSCCCEEEEEEEESSSCCSSCEEEEE----SSSEEEECSCCT
T ss_pred eEEcCCCCC-CCCceEEEEEcCCCEEEEEECC--CCCCCCEEEEEEEEEEECCCCceeEEEecC----CCCEEEEcCCCC
Confidence 355655555 5788999988889999999998 466788999999999998743333223222 346789999999
Q ss_pred eeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 458 YTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 458 ~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
++.|.|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 76 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 104 (111)
T 1x5l_A 76 GTRYVFQVRARTSAGCGRFSQAMEVETGK 104 (111)
T ss_dssp TCEEEECEEEEETTEECCCCCCEEEECCC
T ss_pred CCEEEEEEEEEeCCcCCCCcccEEEEcCC
Confidence 99999999999999999999999998865
No 405
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.63 E-value=9.5e-16 Score=117.31 Aligned_cols=112 Identities=22% Similarity=0.246 Sum_probs=87.3
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEE-EEeeecCcee
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVG 446 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~ 446 (505)
|.|.+|... .+.|.+..| .+|.++++...+.++|.|.|++ +.+.+|.|++|+|+|+..+...+.. ..+. ..
T Consensus 1 G~g~~S~~~-~~~T~~~~P-~~P~~l~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----~~ 72 (119)
T 1wfn_A 1 GSSGSSGPQ-LVRTHEDVP-GPVGHLSFSEILDTSLKVSWQE--PGEKNGILTGYRISWEEYNRTNTRVTHYLP----NV 72 (119)
T ss_dssp CCCCCSCCC-SCCSSCCSC-CCCSCCEEESCCSSEEEEECCC--CTTCCSCCCEEEEEEEESSCGGGCCCEEEC----SS
T ss_pred CCCCCCCCE-EEECCCCCC-CCCCceEEEECCCCEEEEEEcC--CCCCCCcEEEEEEEEEECCCCCceEEEEeC----CC
Confidence 567777764 677777766 5788999998899999999998 4578889999999999887433321 2221 23
Q ss_pred eEEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 447 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 447 ~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
.+.+.|.+|.|++.|.|+|+|+|.+|.|++|+.+.....|+
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~~pp 113 (119)
T 1wfn_A 73 TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPP 113 (119)
T ss_dssp CCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEEEECCCCC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEccCCC
Confidence 46788999999999999999999999999999885544443
No 406
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.62 E-value=1.6e-15 Score=114.10 Aligned_cols=97 Identities=21% Similarity=0.235 Sum_probs=80.6
Q ss_pred CCCCCCCceeee-eccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEE
Q psy14886 384 DKPYQAPSRIGG-GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462 (505)
Q Consensus 384 ~~p~~~P~~~~~-~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 462 (505)
..+|.+|.++.+ .....++|.|.|++ |..+.+++|++|.|+|+..+...|..... ...+.+.|.+|.|++.|.
T Consensus 6 ~~~P~~P~~~~~~~~~~~~sv~l~W~~-P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~v~~L~p~t~Y~ 79 (110)
T 2crz_A 6 SGPPGPCLPPRLQGRPKAKEIQLRWGP-PLVDGGSPISCYSVEMSPIEKDEPREVYQ-----GSEVECTVSSLLPGKTYS 79 (110)
T ss_dssp CCCCCCCCCCEECSCCCSSEEEEECCC-CSCCTTSCCCEEEEEEECTTSCCCEEEEE-----ESCSEEEEESCCTTCEEE
T ss_pred CCCCCCCCCceeccccCCCEEEEEeCC-CCCCCCceeEEEEEEEEeCCCCceEEEEe-----CCcEEEEECCcCCCCEEE
Confidence 445578888888 46678899999987 35567889999999999888778876542 134678899999999999
Q ss_pred EEEEEecCCCCCCCCceEEEeecc
Q psy14886 463 VKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 463 ~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
|||+|+|.+|.|++|+.+.+.|.+
T Consensus 80 frV~A~n~~G~g~~S~~~~~~T~~ 103 (110)
T 2crz_A 80 FRLRAANKMGFGPFSEKCDITTAP 103 (110)
T ss_dssp ECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEcCCccCCCCCccccccCC
Confidence 999999999999999999998864
No 407
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.62 E-value=1.8e-15 Score=112.76 Aligned_cols=97 Identities=21% Similarity=0.139 Sum_probs=77.8
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEE
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 462 (505)
...+|.+|.++.+...+.++|.|.|++ +.+.+++|++|.|+|+..+ ..|.... .. ..+.+.|.+|.|++.|.
T Consensus 4 ~~~~P~~P~~~~~~~~s~~sv~l~W~~--p~~~g~~i~~Y~v~~~~~~-~~~~~~~-~~----~~~~~~v~~L~p~t~Y~ 75 (106)
T 1x4x_A 4 GSSGPDQCKPPQVTCRSATCAQVNWEV--PLSNGTDVTEYRLEWGGVE-GSMQICY-CG----PGLSYEIKGLSPATTYY 75 (106)
T ss_dssp SCCSCCCCCCCCCEEEETTEEEEECCC--CSCSSSCCCEEEEEEESST-TSCCEEE-EE----SCSEEEEESCCSSCEEE
T ss_pred CCCCcCCCCCCEEEEcCCCEEEEEEcC--CCCCCCcceEEEEEEEcCC-CceEEEE-eC----CcceEEEcCCCCCCEEE
Confidence 455667899999988889999999998 3444458999999998766 3343222 11 23578899999999999
Q ss_pred EEEEEecCCCCCCCCceEEEeecce
Q psy14886 463 VKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 463 ~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
|||+|+|.+|.|++|+.+.+.|.+.
T Consensus 76 frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 76 CRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEEcCCcCCCCcCCEEEECCCC
Confidence 9999999999999999999988653
No 408
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=3e-15 Score=114.60 Aligned_cols=99 Identities=17% Similarity=0.254 Sum_probs=82.5
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEE
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 462 (505)
...+|.+|.++.+...+.++|.|.|++ +.+.++.|++|+|+|+..+...|....... .....+.|.+|.|++.|.
T Consensus 14 ~~~~P~~P~~l~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~ 88 (119)
T 2ed7_A 14 SSVLPSAPRDVVPVLVSSRFVRLSWRP--PAEAKGNIQTFTVFFSREGDNRERALNTTQ---PGSLQLTVGNLKPEAMYT 88 (119)
T ss_dssp SSSSCCCCSCCEEEEECSSCEEEECCC--CSCCSSCEEEEEEEEEESSCCCCEEEECCC---TTCCEEEECSCCSSSEEE
T ss_pred CCCCCcCCcceEEEecCCCEEEEEEeC--CCCCCCcEEEEEEEEEeCCCCcceeeEeec---CCceEEEeCCCCCCCEEE
Confidence 444557999999988899999999998 456788999999999998866666443221 234678999999999999
Q ss_pred EEEEEecCCCCCCCCceEEEeecc
Q psy14886 463 VKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 463 ~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
|+|+|+|.+|.|++|+.+.+.|.+
T Consensus 89 ~~V~A~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ed7_A 89 FRVVAYNEWGPGESSQPIKVATQP 112 (119)
T ss_dssp ECCEEEESSCBCSCCCCEEEECCC
T ss_pred EEEEEEcCCccCCCcCCEEEEeCC
Confidence 999999999999999999998864
No 409
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=116.65 Aligned_cols=100 Identities=20% Similarity=0.206 Sum_probs=76.6
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCC-CceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeE
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP-NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~-i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y 461 (505)
+..|. +|.++.+...+.+ +.|.|++ +.+.+|. |++|+|+|+..+...|.............+.+.|.+|.|++.|
T Consensus 5 ~~~P~-~P~~~~~~~~~~t-v~l~W~~--P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 80 (122)
T 2e3v_A 5 SSGPS-SPSIDQVEPYSST-AQVQFDE--PEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTY 80 (122)
T ss_dssp -CCCC-CCEEEEEEECSSC-EEEEEEC--CCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEE
T ss_pred CcCCc-CCCccEEEecCCc-EEEEECC--CCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEE
Confidence 34454 4899999877777 9999998 3556665 9999999999988888543221111123467899999999999
Q ss_pred EEEEEEecCCCCCCCCceEEEeecc
Q psy14886 462 EVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 462 ~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
.|+|+|+|.+|.|++|+.+.+.|.|
T Consensus 81 ~~rV~A~n~~G~g~~S~~~~~~t~~ 105 (122)
T 2e3v_A 81 AVRLAALNGKGLGEISAASEFKTQP 105 (122)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEeCCccCCCcccccccccC
Confidence 9999999999999999999986654
No 410
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.62 E-value=7.9e-15 Score=127.74 Aligned_cols=165 Identities=19% Similarity=0.298 Sum_probs=108.0
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEEe---------------cCCCcEEEee----CCCEEEcCCCCCCCE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNII---------------GSGGRRKIFE----NGNLLISPVSRDDSG 155 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~~---------------~~~~~~~~~~----~~~l~i~~v~~~d~G 155 (505)
..+.+.+|++++|.|. .+.|.+.+.|+++ +... ....++.+.. ..+|.|.+++.+|+|
T Consensus 8 ~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG 86 (238)
T 2p1y_A 8 RNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTS 86 (238)
T ss_dssp SEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCE
T ss_pred cceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCe
Confidence 4567899999999999 6778889999984 2111 0123444432 236999999999999
Q ss_pred EEEEEEEcCCCce-----eeeEEEEEEeCCe-----------eeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeC
Q psy14886 156 IYSCTATNVHGMD-----ESKGRLIVLHGPS-----------YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 219 (505)
Q Consensus 156 ~y~C~~~~~~g~~-----~~~~~l~v~~~p~-----------~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~ 219 (505)
.|.|.+.+..|.. .....|.|...+. .+...+....+..|+.+.|.|.+.+.+.+ .+.|+++
T Consensus 87 ~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~--~i~W~k~ 164 (238)
T 2p1y_A 87 VYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFD--YFPWYQQ 164 (238)
T ss_dssp EEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCC--EEEEEEE
T ss_pred eEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCC--cEEEEEE
Confidence 9999999876521 1235677765443 33334556778899999999999988765 5668875
Q ss_pred CE-----EecC--CCCCcccCCeeee------cCCeEEEecCCCCCCEEEEEEEEecC
Q psy14886 220 GV-----RIGN--MDLNELETPNINI------DGGLLEITNASFADAGEYECVVKSTV 264 (505)
Q Consensus 220 ~~-----~~~~--~~~~~~~~~~~~~------~~~~l~i~~~~~~~~g~y~C~~~n~~ 264 (505)
+. .+.. ..........+.. ....|.|.++..+|+|.|.|.|.|..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 165 FPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 31 1100 0000000011111 12479999999999999999999974
No 411
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.62 E-value=1.9e-15 Score=129.90 Aligned_cols=169 Identities=17% Similarity=0.286 Sum_probs=111.5
Q ss_pred eEEeeCCCeEEEEeecCCCC--CCeEEEEECC--EE---e-c--C-------------CCcEEEeeC---C--CEEEcCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--NI---I-G--S-------------GGRRKIFEN---G--NLLISPV 149 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g--~~---~-~--~-------------~~~~~~~~~---~--~l~i~~v 149 (505)
...+.+|++++|.|.+.+.+ .+.+.|++++ .. + . . ..++.+..+ + +|.|.++
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (220)
T 1pz5_B 9 GGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNL 88 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccC
Confidence 35688999999999998765 6799999842 21 1 0 0 245554421 2 6999999
Q ss_pred CCCCCEEEEEEEEcCCCce-e--eeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeec-CCCCeEEEEEeCCE
Q psy14886 150 SRDDSGIYSCTATNVHGMD-E--SKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGV 221 (505)
Q Consensus 150 ~~~d~G~y~C~~~~~~g~~-~--~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~~w~~~~~ 221 (505)
+.+|+|.|.|.+.+..+.. . ..+.|.|.. +|.+... +....+..|+.+.|.|.+.+. |.| +.+.|++++.
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~~ 166 (220)
T 1pz5_B 89 RAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPL-VPGCSDTSGSSVTLGCLVKGYFPEP-VTVKWNYGAL 166 (220)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEE-CCCSCCSCSSSEEEEEEEEEEBSSC-CEEEEGGGTC
T ss_pred CHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEc-ccccccCCCCcEEEEEEEEEEeCCC-eEEEEecCCc
Confidence 9999999999999875432 1 346677753 2333322 222234678999999999987 543 4778998775
Q ss_pred Ee---cCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEE
Q psy14886 222 RI---GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272 (505)
Q Consensus 222 ~~---~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~ 272 (505)
.. ..... ... ......+.|.|.....++ |.|+|.|.|..|..+..+.
T Consensus 167 ~~~~~~~~~~--~~~-~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 167 SSGVRTVSSV--LQS-GFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp CTTEEECCCE--EET-TEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred ccceEEcCCc--ccC-CeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 31 11000 000 111224568888877766 9999999999997665543
No 412
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.62 E-value=6.1e-15 Score=126.18 Aligned_cols=170 Identities=18% Similarity=0.275 Sum_probs=105.6
Q ss_pred eEEeeCCCeEEEEeecCCC--CCCeEEEEEC--CEE---e-------------cCCCcEEEeeCC---CEEEcCCCCCCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAA--PKPKFVWKKD--GNI---I-------------GSGGRRKIFENG---NLLISPVSRDDS 154 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~--p~~~i~W~~~--g~~---~-------------~~~~~~~~~~~~---~l~i~~v~~~d~ 154 (505)
.+.+.+|++++|.|.+.+. +.+.+.|++. +.. + ....++.+...+ +|.|.+++.+|+
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (215)
T 3nl4_H 8 GRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDT 87 (215)
T ss_dssp CCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGC
T ss_pred CEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccC
Confidence 3568899999999998763 3568999873 211 1 012344444333 399999999999
Q ss_pred EEEEEEEEcCCCc----eeeeEEEEEE----eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC
Q psy14886 155 GIYSCTATNVHGM----DESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 155 G~y~C~~~~~~g~----~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~ 226 (505)
|.|.|.+.+..+. ......|.|. ..|.+... +....+..|+.+.|.|.+.+.+++.+.+.|.+++..+...
T Consensus 88 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~ 166 (215)
T 3nl4_H 88 ATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPL-APCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVR 166 (215)
T ss_dssp EEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEE-CCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred EEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEe-cCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeE
Confidence 9999999987553 2333567775 23333322 2233455799999999999977667788899988643211
Q ss_pred CCCcccCCeeeecCCeEEE---ecCCCCCCEEEEEEEEecCCcEEEEEEEE
Q psy14886 227 DLNELETPNINIDGGLLEI---TNASFADAGEYECVVKSTVGKISTKTTVI 274 (505)
Q Consensus 227 ~~~~~~~~~~~~~~~~l~i---~~~~~~~~g~y~C~~~n~~g~~~~~~~l~ 274 (505)
.. ......++.+.+ ..+...+ |.|+|.|.|..|.......+.
T Consensus 167 ~~-----~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 167 TF-----PSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp EC-----CCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred ec-----CceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 10 111122333333 3345556 999999999988766555543
No 413
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.62 E-value=5.8e-16 Score=132.48 Aligned_cols=166 Identities=17% Similarity=0.263 Sum_probs=103.7
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc---C-C-----CCCCCCCCcEEEE------CCeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN---S-E-----TLPLEDQDRYFIQ------DNVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~---~-~-----~~~~~~~~~~~~~------~~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. . . .......+|+.+. ..+|.|.+++ .+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D~ 90 (215)
T 1c5d_H 12 VQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ-TEDT 90 (215)
T ss_dssp ECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC-GGGC
T ss_pred ecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC-cccC
Confidence 46899999999998754 5889999953 2110 0 0 0000124677653 1389999999 9999
Q ss_pred eEEEEEEEcccCc---eEeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecCC
Q psy14886 62 AMYQCRAKNQLKT---RYSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGSG 133 (505)
Q Consensus 62 G~Y~C~~~~~~~~---~~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~~ 133 (505)
|.|.|.+.+..+. ....+.|.|... +|.+...+.. ..+.+|+.++|.|.+.+. |.+ .+.|+++|..+...
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~ 168 (215)
T 1c5d_H 91 AIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPG--CGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVH 168 (215)
T ss_dssp EEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCC--SSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCC
T ss_pred EEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCC--hhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCceE
Confidence 9999999876421 112467777632 2333222111 124689999999999886 777 99999988654311
Q ss_pred CcEEEeeCCCE----EEcCCCCCCCEEEEEEEEcCCCceee
Q psy14886 134 GRRKIFENGNL----LISPVSRDDSGIYSCTATNVHGMDES 170 (505)
Q Consensus 134 ~~~~~~~~~~l----~i~~v~~~d~G~y~C~~~~~~g~~~~ 170 (505)
.......++.+ .+.....+| |.|+|.|.|..+....
T Consensus 169 ~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 169 TFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp BCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEE
T ss_pred ecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccE
Confidence 11111112221 122333355 9999999998776543
No 414
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.62 E-value=1.7e-14 Score=121.08 Aligned_cols=186 Identities=14% Similarity=0.112 Sum_probs=128.1
Q ss_pred CCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEe-----CCCCCeEEeeeccccceeeeecCceeeEEeeeccCCc
Q psy14886 281 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART-----NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 355 (505)
Q Consensus 281 ~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~-----~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 355 (505)
+|.++.+...... ..|+|+++.... ....|.|+|+. .+...|.....-.. ......-+..++..+.
T Consensus 9 ~P~nv~~~s~n~~-~iL~W~p~~~~~-~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~-------i~~~~Cdlt~~~~~~~ 79 (206)
T 4doh_B 9 APQQLSVLSTNMK-HLLMWSPVIAPG-ETVYYSVEYQGEYESLYTSHIWIPSSWCSL-------TEGPECDVTDDITATV 79 (206)
T ss_dssp CCCCCEEEEETTE-EEEECCCCCCSS-SCCEEEEEEEEHHHHHHSTTCCEEEEEEEE-------ESSSEEECTTTCCSSS
T ss_pred CCCeeEEEEeCCE-EEEEECCCCCCC-CCEEEEEEEEEeccccCCCccceecccccC-------CCCCEEcCCccccCCC
Confidence 4788888776665 699999985333 34789999994 45678987532111 1222333333366688
Q ss_pred eeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcE
Q psy14886 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 435 (505)
Q Consensus 356 ~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~ 435 (505)
.|.+||+|.+..+.+.++... .+........+||. +.+. ....+|.|.|+++ +.+..|.|.|.+.++..-.
T Consensus 80 ~Y~~RVrA~~~~~~S~w~~~~-~f~~~~~t~i~PP~-v~v~-~~~~~i~V~~~~p------~~~l~Y~v~y~~~~~~~~~ 150 (206)
T 4doh_B 80 PYNLRVRATLGSQTSAWSILK-HPFNRQSTILTRPG-MEIT-KDGFHLVIELEDL------GPQFEFLVAYWRREPGAEE 150 (206)
T ss_dssp CEEEEEEEEETTEECCCEECS-SCBCGGGCBCCCCC-EEEE-EETTEEEEEECCC------CTTCEEEEEEEESSSSCCC
T ss_pred CEEEEEEEEcCCCccCccccc-cccchhhcccCCCe-EEEE-eCCCEEEEEecCC------CCcEEEEEEEEEcCCCcee
Confidence 999999999998888876543 34444444455665 5554 5688999999873 5788999999998744322
Q ss_pred -EEEeeecCceeeEEEEcCCccceeeEEEEEEEecCC--CCCCCCceEEEeecceE
Q psy14886 436 -SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV--GPGPESEVVTIWHDPLV 488 (505)
Q Consensus 436 -~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~--G~g~~s~~~~~~t~p~~ 488 (505)
...... ....+.|.+|.|++.|.|+|+|+... |.|.+|+...+.|...+
T Consensus 151 ~~~~~~~----~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~~~~ 202 (206)
T 4doh_B 151 HVKMVRS----GGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEA 202 (206)
T ss_dssp EEEEECC----SSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC----
T ss_pred EEeEEcc----CCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEccchh
Confidence 111111 12467899999999999999999864 88999999999886544
No 415
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.62 E-value=7e-15 Score=129.29 Aligned_cols=185 Identities=16% Similarity=0.176 Sum_probs=116.7
Q ss_pred ceEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEE---e--------------cCCCcEEEeeCC-----CEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---I--------------GSGGRRKIFENG-----NLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~---~--------------~~~~~~~~~~~~-----~l~i~~v~ 150 (505)
..+.+.+|++++|.|.+.+.+ .+.+.|++. +.. + ....++.+..+. +|.|.+++
T Consensus 9 ~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 88 (253)
T 3uzq_A 9 GAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLT 88 (253)
T ss_dssp CCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCC
Confidence 346688999999999998854 679999982 211 1 012345544333 29999999
Q ss_pred CCCCEEEEEEEEcCCCcee-eeEEEEEEeC--------------CeeeeeCCCceEEEeeccEEEEEEeeecCCC--CeE
Q psy14886 151 RDDSGIYSCTATNVHGMDE-SKGRLIVLHG--------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVA 213 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~~-~~~~l~v~~~--------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~ 213 (505)
.+|+|.|.|.+.+..+... ....|.|... +..+...+....+..|+.++|.|.+.+.+.+ ...
T Consensus 89 ~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~ 168 (253)
T 3uzq_A 89 SGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNSF 168 (253)
T ss_dssp GGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEEC
T ss_pred cccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcE
Confidence 9999999999998665543 3466777542 2333344556788899999999999887654 135
Q ss_pred EEEEeC--CEEec---CCCC--C--cccCCee--eecCCeEEEecCCCCCCEEEEEEEEecCCc-EEEEEEEEEcCCCCC
Q psy14886 214 YIWTHN--GVRIG---NMDL--N--ELETPNI--NIDGGLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVEGPPGL 281 (505)
Q Consensus 214 ~~w~~~--~~~~~---~~~~--~--~~~~~~~--~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~-~~~~~~l~v~~~p~~ 281 (505)
+.|+++ +.... .... . ....... ......|.|.++..+|+|.|.|.|.|..+. ......|.|...+.+
T Consensus 169 v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~~ 248 (253)
T 3uzq_A 169 MHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPLEH 248 (253)
T ss_dssp EEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC---
T ss_pred EEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCCCC
Confidence 679873 21111 0000 0 0000111 111236999999999999999999886543 233456667655443
No 416
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.62 E-value=9.1e-16 Score=114.13 Aligned_cols=92 Identities=27% Similarity=0.528 Sum_probs=77.3
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEeeCC---CEEEcCCCCCCCEEEEEEEEc
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 163 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~~~---~l~i~~v~~~d~G~y~C~~~~ 163 (505)
||.|...+ .+..+.+|+++.|.|.+.|.|.+.|.|+++|..+..+.++.+..++ +|.|.++..+|+|.|+|.|.|
T Consensus 13 pP~f~~~p--~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 13 PPCFLRFP--RPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCC--CcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 45555444 4467899999999999999999999999999999887777765544 599999999999999999999
Q ss_pred CCCceeeeEEEEEEeCC
Q psy14886 164 VHGMDESKGRLIVLHGP 180 (505)
Q Consensus 164 ~~g~~~~~~~l~v~~~p 180 (505)
..|.....+.|.|..+|
T Consensus 91 ~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp TTEEEEEEEEEEEEC--
T ss_pred CCCEEEEEEEEEEEcCC
Confidence 99999888999987654
No 417
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=2.5e-15 Score=112.23 Aligned_cols=93 Identities=19% Similarity=0.272 Sum_probs=79.5
Q ss_pred CCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEE
Q psy14886 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 466 (505)
Q Consensus 387 ~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~ 466 (505)
|.+|.++++...+.++|.|.|++ +...++.|++|+|+|+..+...|...... .+.+.|.+|.|++.|.|+|+
T Consensus 8 P~~P~~l~~~~~~~~si~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~------~~~~~i~~L~p~t~Y~~~V~ 79 (106)
T 2ed8_A 8 PGPVENLQAVSTSPTSILITWEP--PAYANGPVQGYRLFCTEVSTGKEQNIEVD------GLSYKLEGLKKFTEYSLRFL 79 (106)
T ss_dssp CCCCEEEEEECSSTTEEEEEEEC--CSSCSSCCCEEEEEEEETTTCCEEEEEEC------SSCEEEESCCTTCEEEEEEE
T ss_pred CcCCceeEEEecCCCEEEEEECC--CCCCCCCeeEEEEEEEECCCCceEEEeCC------ccEEEECCCCCCCEEEEEEE
Confidence 34899999998899999999998 34677899999999999887777644332 35788999999999999999
Q ss_pred EecCCCCCCCCceEEEeecce
Q psy14886 467 AINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 467 a~n~~G~g~~s~~~~~~t~p~ 487 (505)
|+|.+|.|++|+.+.++|...
T Consensus 80 A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 80 AYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EECSSCEEEECCCEEEECCCC
T ss_pred EEeCCccCCCcCCEEEEcCCC
Confidence 999999999999999988643
No 418
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.62 E-value=4.4e-16 Score=137.01 Aligned_cols=163 Identities=15% Similarity=0.235 Sum_probs=105.2
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc----CC---C---CCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN----SE---T---LPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~----~~---~---~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. .. . ......+|+.+. ..+|.|.+++ .+|
T Consensus 18 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 96 (261)
T 2xqy_G 18 VKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLT-SED 96 (261)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC-GGG
T ss_pred EcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCC-ccc
Confidence 46899999999998766 6889999963 2111 00 0 000123577653 2489999999 999
Q ss_pred CeEEEEEEEcccCce---EeeEEEEEEec---CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecC
Q psy14886 61 PAMYQCRAKNQLKTR---YSSAQLRVLTL---KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGS 132 (505)
Q Consensus 61 ~G~Y~C~~~~~~~~~---~~~~~l~v~~~---~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~ 132 (505)
+|.|.|.+.+..+.. ...+.|.|... +|.+.... +...+.+|+.++|.|.+.+. |.+ .+.|++++..+..
T Consensus 97 sG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~ 174 (261)
T 2xqy_G 97 SAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLA--PVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGV 174 (261)
T ss_dssp CEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEEC--CCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTE
T ss_pred CeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeC--CCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCce
Confidence 999999999854211 12356777641 23332211 11125679999999999875 665 9999998875421
Q ss_pred --CCcE----EEeeCCCEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 133 --GGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 133 --~~~~----~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
.... .......|.|.++..+| |.|+|.|.|....
T Consensus 175 ~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 175 HTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp EECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred EecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 1111 11112358888888878 9999999986543
No 419
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.62 E-value=1.2e-14 Score=122.76 Aligned_cols=191 Identities=16% Similarity=0.135 Sum_probs=114.2
Q ss_pred CCCceEEEEE-eCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEeeecc--ccceeeeec--CceeeEEeeeccCCc
Q psy14886 281 LPGGVQVVEV-HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV--IGKEVDRYT--GRKEASIENVLVPWS 355 (505)
Q Consensus 281 ~p~~~~~~~~-~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~~~~--~~~~~~~~~--~~~~~~~~~~L~~~~ 355 (505)
.+.++.+... ....++.+|+++.+.+.+...|.+.|...... -....... .....+... ......+.. +...+
T Consensus 3 ~~~nlsC~~~~~~~~~~C~W~~g~~~~l~t~~~~l~~~~~~~~-c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~-~~~~~ 80 (206)
T 3v6o_A 3 VNINISCETDGYLTKMTCRWSTSTIQSLAESTLQLRYHRSSLY-CSDIPSIHPISEPKDCYLQSDGFYECIFQP-IFLLS 80 (206)
T ss_dssp -CCCCEEEECTTSSCEEEEECCCC--------EEEEEEECSSC-CCSSCCCCSSCEEECEEECTTSCEEEEECS-CCTTS
T ss_pred CCEEEEEEECCCCcEEEEEecCCCcCCcccccEEEEEEEcCcC-ccccccccccCcCCCCCCCCCCCceEEeCc-HHhcc
Confidence 4567777666 35899999998766554333688887754310 00000000 000001111 112333333 77789
Q ss_pred eeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeecc-ccccEEEEEEeCCccccCCCCceEEEEEEEcC-CCC
Q psy14886 356 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG-KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTE 433 (505)
Q Consensus 356 ~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~-~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~-~~~ 433 (505)
.|.|+|.|.|..|.+. |... .+.+.....+.||.++.+... ..+++.|+|++|.. .. .++.|.|+|+..+ ...
T Consensus 81 ~Y~~~V~a~N~~G~~~-s~~~-~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~--~~-~~l~yev~y~~~~~~~~ 155 (206)
T 3v6o_A 81 GYTMWIRINHSLGSLD-SPPT-CVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVF--PE-NNLQFQIRYGLSGKEVQ 155 (206)
T ss_dssp CEEEEEEEC---CCEE-CCCE-EECGGGGBCCCCCCSCEEEEETTTTEEEEEC-----------CEEEEEEEEESSSSCC
T ss_pred cEEEEEEEEcCCcccc-CCcc-cEeecceEcCCCCCceEeEEecCCCeEEEEECCCCC--CC-CcEEEEEEEEECCCCCc
Confidence 9999999999999875 3322 454555667789999888654 57899999998433 22 4689999999987 467
Q ss_pred cEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecCCCCCCCCceEE
Q psy14886 434 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 481 (505)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~ 481 (505)
|....... .....+.|.+|.|++.|.|+|+|.+..|.|.+|++..
T Consensus 156 w~~~~~~~---~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeWS~ 200 (206)
T 3v6o_A 156 WKMYEVYD---AKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNWSN 200 (206)
T ss_dssp CEEEEECC------CEEEECCSCTTSCEEEEEEEEETTSCSCCCCCCC
T ss_pred eEEEeccc---CcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCCCc
Confidence 87655332 2224678999999999999999999999998887654
No 420
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.62 E-value=7.3e-17 Score=140.24 Aligned_cols=168 Identities=14% Similarity=0.131 Sum_probs=90.8
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC--EEe---c---------CCCcEEEe---eCCCEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NII---G---------SGGRRKIF---ENGNLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~~~---~---------~~~~~~~~---~~~~l~i~~v~~~d~G~y~C 159 (505)
..+.+.+|++++|.|.+.+.+.+.+.|++++ ..+ . ...++... .+.+|.|.+++.+|+|.|.|
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 110 (233)
T 3bqu_C 31 ASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYC 110 (233)
T ss_dssp SBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEE
T ss_pred CeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEE
Confidence 3456889999999999988877789999843 211 0 01222222 12269999999999999999
Q ss_pred EEEcCCCceee-eEEEEEEe---CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC-CC---Ccc
Q psy14886 160 TATNVHGMDES-KGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-DL---NEL 231 (505)
Q Consensus 160 ~~~~~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~-~~---~~~ 231 (505)
.+.+..+.... ...|.|.. +|.+.... .......|+.++|.|.+.+.+++.+.+.|+++|..+... .. ...
T Consensus 111 ~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~-~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 189 (233)
T 3bqu_C 111 LQSDNLPYTFGGGTNLEIKRADAAPTVSIFP-PSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQD 189 (233)
T ss_dssp EECSSSSCCBCCCCBC---CCCBCCEEEEEC-CCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCC
T ss_pred EEecCCceeecCCEEEEEeCCCCCCEEEEeC-CCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCcc
Confidence 99887653322 23455544 23332222 222233688999999999876555678899998876543 00 000
Q ss_pred cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCC
Q psy14886 232 ETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265 (505)
Q Consensus 232 ~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g 265 (505)
.........+.|.|.....+|.|.|+|.|.|...
T Consensus 190 ~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 190 SKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp TTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 0001111224678888888899999999998654
No 421
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.61 E-value=6e-16 Score=135.51 Aligned_cols=163 Identities=18% Similarity=0.303 Sum_probs=92.8
Q ss_pred CCCCCceEEEEEEeccC--CCeEEEEECC--EECc----CC---C---CCCCCCCcEEEE------CCeEEEEcCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGVP--DVTYSWFRNG--ELLN----SE---T---LPLEDQDRYFIQ------DNVLTIRYLNPERD 60 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p--~~~~~W~~~~--~~l~----~~---~---~~~~~~~~~~~~------~~~L~i~~~~~~~d 60 (505)
+.+|++++|.|.+.+.+ ...+.|+|.+ ..+. .. . ......+|+.+. ..+|.|.+++ .+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~-~~D 90 (257)
T 3bn9_D 12 VKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR-AED 90 (257)
T ss_dssp ECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC-GGG
T ss_pred EcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC-hhh
Confidence 46899999999998765 5789999953 1110 00 0 000124577653 2489999999 999
Q ss_pred CeEEEEEEEcccC----------c--eE-eeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEE
Q psy14886 61 PAMYQCRAKNQLK----------T--RY-SSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFV 122 (505)
Q Consensus 61 ~G~Y~C~~~~~~~----------~--~~-~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~ 122 (505)
+|.|.|.+.+..+ . .. ..+.|.|.. .+|.+.... +...+.+|+.++|.|.+.+. |.+ .|.
T Consensus 91 sG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~--p~~~~~~g~~v~L~C~~~g~~P~pi~v~ 168 (257)
T 3bn9_D 91 TAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVTVS 168 (257)
T ss_dssp CEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCC--C-----------CCCEEEEEBSSCCEEE
T ss_pred CEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEec--CcccccCCCcEEEEEEEeeEECCCcEEE
Confidence 9999999998654 1 11 235777764 234433322 11235689999999999886 766 999
Q ss_pred EEECCEEecCC-CcEEEeeCC------CEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 123 WKKDGNIIGSG-GRRKIFENG------NLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 123 W~~~g~~~~~~-~~~~~~~~~------~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
|++++..+... .......++ .|.|.++...| |.|+|.|.|....
T Consensus 169 W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~ 219 (257)
T 3bn9_D 169 WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 219 (257)
T ss_dssp ETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGT
T ss_pred EeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCC
Confidence 99998764211 000111222 36677777667 9999999986433
No 422
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.61 E-value=1.3e-16 Score=137.93 Aligned_cols=160 Identities=11% Similarity=0.155 Sum_probs=103.8
Q ss_pred CCCCceEEEEEEecc-CC--CeEEEEECCEEC-cCCCC-C-CCCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCce
Q psy14886 2 DNQADLTWTCEAFGV-PD--VTYSWFRNGELL-NSETL-P-LEDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKTR 75 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~-p~--~~~~W~~~~~~l-~~~~~-~-~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~ 75 (505)
.+|++++|.|.+.+. |. ..|+|+++|..+ ..... . ....+.+. ..++|.|.+++ .+|+|.|+|.+.+..+..
T Consensus 26 ~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~-~~s~L~I~~~~-~~D~g~Y~C~~~~~~~~~ 103 (231)
T 2w59_A 26 YISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYS-ASSAVPVSTQD-WLSGERFTCTVQHEELPL 103 (231)
T ss_dssp HTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEE-EEEEEECCHHH-HHTTCCEEEEEECTTCSS
T ss_pred ccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEE-EEEEEEecchh-ccCCCEEEEEEEcCCCCC
Confidence 479999999999884 63 499999999877 31100 0 00122332 33579999999 999999999999876542
Q ss_pred EeeEEEEEEe-----cCCCccCCCCCceEEeeCCCeEEEEeecCCC-C-CCeEEEEECCEEecCCCcE----EEe-----
Q psy14886 76 YSSAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-P-KPKFVWKKDGNIIGSGGRR----KIF----- 139 (505)
Q Consensus 76 ~~~~~l~v~~-----~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p-~~~i~W~~~g~~~~~~~~~----~~~----- 139 (505)
.+.+.|.. .+|.+.+...... ...+..++|.|.+.|. | .+.|.|+++|..+...... ...
T Consensus 104 --~~~~~v~~~~~~~~~P~v~v~~~~~~--~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~ 179 (231)
T 2w59_A 104 --PLSKSVYRNTGPTTPPLIYPFAPHPE--ELSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTAN 179 (231)
T ss_dssp --CEEEEECCCCSCCBCCEEEEECCCGG--GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSC
T ss_pred --ceEEEEecCCCCCcCCEEEEeCCCHH--HhccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCccccc
Confidence 33344421 2343332221111 1235679999999885 4 4699999999988643211 111
Q ss_pred ---eC-C------CEEEcCCCCCCCEEEEEEEEcCCCc
Q psy14886 140 ---EN-G------NLLISPVSRDDSGIYSCTATNVHGM 167 (505)
Q Consensus 140 ---~~-~------~l~i~~v~~~d~G~y~C~~~~~~g~ 167 (505)
.+ + .|.|......|.|.|+|.|.|....
T Consensus 180 ~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 180 GAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp C---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred ccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 23 3 3667777777899999999987654
No 423
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.61 E-value=9.8e-15 Score=127.30 Aligned_cols=169 Identities=18% Similarity=0.226 Sum_probs=109.1
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEE--------------CCEEec---CCCcEEEeeC----CCEEEcCCCCCCCE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKK--------------DGNIIG---SGGRRKIFEN----GNLLISPVSRDDSG 155 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~--------------~g~~~~---~~~~~~~~~~----~~l~i~~v~~~d~G 155 (505)
..+.+.+|++++|.|.+.+ +.+.+.|++ ++.... ...++.+..+ .+|.|.+++.+|+|
T Consensus 10 ~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 88 (240)
T 3q5y_A 10 RHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSA 88 (240)
T ss_dssp SEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCE
T ss_pred ceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCE
Confidence 4567899999999999876 677999998 221111 1235544432 25999999999999
Q ss_pred EEEEEEEcCC---CceeeeEEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC
Q psy14886 156 IYSCTATNVH---GMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 156 ~y~C~~~~~~---g~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~ 226 (505)
.|.|.+.+.. ........|.|.. +|.+....+....+..|+.+.|.|.+.+.+++.+.+.|+++|..+...
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~ 168 (240)
T 3q5y_A 89 MYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSG 168 (240)
T ss_dssp EEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCc
Confidence 9999998321 2223335677763 333333333333445688999999999865555688899999988653
Q ss_pred CCCcccC----CeeeecCCeEEEecCCCCC-CEEEEEEEEecCCc
Q psy14886 227 DLNELET----PNINIDGGLLEITNASFAD-AGEYECVVKSTVGK 266 (505)
Q Consensus 227 ~~~~~~~----~~~~~~~~~l~i~~~~~~~-~g~y~C~~~n~~g~ 266 (505)
....... .......+.|.|.....+| .|.|+|.|.|....
T Consensus 169 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 169 VSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 2110000 0011112347777777777 77999999986554
No 424
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.61 E-value=2.9e-15 Score=111.29 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=75.1
Q ss_pred CCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEE
Q psy14886 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463 (505)
Q Consensus 384 ~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~ 463 (505)
..+|.+|..+.+. ...+++.|.|.+ +.+++.+|++|.|+|+..+...|....... . ....+.|.+|.|++.|+|
T Consensus 6 ~~~P~pP~~~~~~-~~~~sv~L~W~p--~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~-~--~~~~~~l~~L~p~t~Y~f 79 (114)
T 2kbg_A 6 MREPSPPSIHGQP-SSGKSFKLSITK--QDDGGAPILEYIVKYRSKDKEDQWLEKKVQ-G--NKDHIILEHLQWTMGYEV 79 (114)
T ss_dssp -CCCCSCCEECCB-CSTTCEEEEECC--CCCSSSCCSEEEEEEEESSCCSCCEEEEEE-T--TTCCEEECCCCTTCCEEE
T ss_pred CCCccCCcccccc-cCCCEEEEEEEC--CCCCCCcccEEEEEEEeCCCCCcEEeEEcC-C--CcCEEEEcCCCCCCEEEE
Confidence 3466788776655 678999999997 678999999999999998766665433222 2 235688999999999999
Q ss_pred EEEEecCCCCCCCCceEEEeec
Q psy14886 464 KVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 464 ~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
||.|+|.+|.|.+|.. .+.|.
T Consensus 80 rV~A~N~~G~s~pS~~-~~~T~ 100 (114)
T 2kbg_A 80 QITAANRLGYSEPTVY-EFSMP 100 (114)
T ss_dssp EEEEECTTSCEEEEEE-EECCC
T ss_pred EEEEEeCCcCcCCcCC-EEEcC
Confidence 9999999999999974 56664
No 425
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.61 E-value=7.6e-15 Score=129.30 Aligned_cols=179 Identities=16% Similarity=0.223 Sum_probs=113.9
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEE---e--------------cCCCcEEEeeCC-----CEEEcCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---I--------------GSGGRRKIFENG-----NLLISPVSRD 152 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~---~--------------~~~~~~~~~~~~-----~l~i~~v~~~ 152 (505)
..+.+|++++|.|.+.+.+ .+.+.|++. +.. + ....++.+..+. +|.|.+++.+
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (256)
T 3umt_A 12 ELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSE 91 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred eEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcc
Confidence 5588999999999988765 679999973 211 1 012344444322 3999999999
Q ss_pred CCEEEEEEEEcC----CCceeeeEEEEEEeC---------------CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeE
Q psy14886 153 DSGIYSCTATNV----HGMDESKGRLIVLHG---------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 213 (505)
Q Consensus 153 d~G~y~C~~~~~----~g~~~~~~~l~v~~~---------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 213 (505)
|+|.|.|.+.+. .+.......|.|... ++.+...+....+..|+.++|.|.+.+.+.+ .
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~--~ 169 (256)
T 3umt_A 92 DSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS--N 169 (256)
T ss_dssp GCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT--C
T ss_pred cCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc--E
Confidence 999999999987 233334467777642 3333444556788899999999999987766 4
Q ss_pred EEEEeC--CEEec---CCCC--C--cccCCee--eecCCeEEEecCCCCCCEEEEEEEEecCCcE-EEEEEEEEcCCC
Q psy14886 214 YIWTHN--GVRIG---NMDL--N--ELETPNI--NIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 279 (505)
Q Consensus 214 ~~w~~~--~~~~~---~~~~--~--~~~~~~~--~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~-~~~~~l~v~~~p 279 (505)
+.|+++ +.... .... . ....... ......|.|.++..+|+|.|.|.+.+..+.. .....|.|...+
T Consensus 170 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 170 LNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp EEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 568773 22111 0000 0 0000111 1122369999999999999999998865432 234566665443
No 426
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.61 E-value=2.4e-14 Score=126.21 Aligned_cols=168 Identities=17% Similarity=0.201 Sum_probs=107.6
Q ss_pred ceEEeeCCCeEEEEeecCCC--CCCeEEEEECC--EE---ec---------CCCcEEEeeCC---CEEEcCCCCCCCEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAA--PKPKFVWKKDG--NI---IG---------SGGRRKIFENG---NLLISPVSRDDSGIY 157 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~--p~~~i~W~~~g--~~---~~---------~~~~~~~~~~~---~l~i~~v~~~d~G~y 157 (505)
....+.+|++++|.|.+.+. +.+.+.|+++. .. +. ...++.....+ +|.|.+++.+|+|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 34678999999999999887 67899999842 11 10 12344443332 599999999999999
Q ss_pred EEEEEcCCCce---eeeEEEEEEeCCe-------------------eeeeCCCceEEEeeccEEEEEEeeecCCCCeEEE
Q psy14886 158 SCTATNVHGMD---ESKGRLIVLHGPS-------------------YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215 (505)
Q Consensus 158 ~C~~~~~~g~~---~~~~~l~v~~~p~-------------------~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~ 215 (505)
.|.+.+..+.. .....|.|...+. +....+....+..|+.++|.|.+.+.+.+...+.
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 169 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMS 169 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEE
Confidence 99999865422 2335677765431 1112223455788999999999988764455778
Q ss_pred EEeC--CEEec------CCCC------CcccCCeeee----cCCeEEEecCCCCCCEEEEEEEEecC
Q psy14886 216 WTHN--GVRIG------NMDL------NELETPNINI----DGGLLEITNASFADAGEYECVVKSTV 264 (505)
Q Consensus 216 w~~~--~~~~~------~~~~------~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~n~~ 264 (505)
|+++ +..+. .... .......... ....|.|.++..+|+|.|.|.|.|..
T Consensus 170 W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 170 WVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 9875 32110 0000 0000011111 12359999999999999999999864
No 427
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.61 E-value=4e-15 Score=111.53 Aligned_cols=91 Identities=19% Similarity=0.191 Sum_probs=77.9
Q ss_pred CCCCceeeeec--cccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEE
Q psy14886 387 YQAPSRIGGGG--GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464 (505)
Q Consensus 387 ~~~P~~~~~~~--~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~ 464 (505)
|.+|.++++.. .+.++|.|.|++ +.+.++.|++|+|+|+..+...|..... ..+.+.|.+|.|++.|.|+
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~------~~~~~~l~~L~p~t~Y~~~ 79 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAP--PIHTHGLIREYIVEYSRSGSKMWASQRA------ASNFTEIKNLLVNTLYTVR 79 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEEC--CSCCSSCEEEEEEEEEETTCSCCEEEEE------SSSEEEECSCCSSCEEEEE
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcC--CCCCCCcEEEEEEEEEECCCCCeEEecC------CccEEEeCCCCCCCEEEEE
Confidence 35899997754 578999999999 4478899999999999988777875432 2358899999999999999
Q ss_pred EEEecCCCCCCCCceEEEeec
Q psy14886 465 VQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 465 v~a~n~~G~g~~s~~~~~~t~ 485 (505)
|+|+|.+|.|++|+.+.+.|.
T Consensus 80 V~A~n~~G~g~~S~~~~~~T~ 100 (108)
T 2dm4_A 80 VAAVTSRGIGNWSDSKSITTI 100 (108)
T ss_dssp EEEEESSCEEEECCCEEEECC
T ss_pred EEEECCCceeCCCCCEEEECC
Confidence 999999999999999999885
No 428
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.61 E-value=8.3e-15 Score=128.98 Aligned_cols=168 Identities=15% Similarity=0.210 Sum_probs=109.8
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC--EE---e----------cCCCcEEEee-----CCCEEEcCCCCCCCEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---I----------GSGGRRKIFE-----NGNLLISPVSRDDSGI 156 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~~---~----------~~~~~~~~~~-----~~~l~i~~v~~~d~G~ 156 (505)
..+.+.+|++++|.|.+.+.|.+.+.|++.. .. + ....++.+.. ..+|.|.+++.+|+|.
T Consensus 11 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~ 90 (256)
T 3tf7_C 11 ARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAV 90 (256)
T ss_dssp SEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSE
T ss_pred ceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEE
Confidence 4577899999999999988888999999832 11 1 0122333321 1259999999999999
Q ss_pred EEEEEEcCCCce----eeeEEEEEEe-------------------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeE
Q psy14886 157 YSCTATNVHGMD----ESKGRLIVLH-------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 213 (505)
Q Consensus 157 y~C~~~~~~g~~----~~~~~l~v~~-------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 213 (505)
|.|.+.+..+.. .....|.|.. .++.+...+....+..|+.++|.|.+.+. .+ .
T Consensus 91 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~--~ 167 (256)
T 3tf7_C 91 YFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HN--Y 167 (256)
T ss_dssp EEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-CS--E
T ss_pred EEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-ce--E
Confidence 999999876522 2235677764 13334445566677899999999999876 33 5
Q ss_pred EEEEeCC--EEec--C----CCCCc----ccCCee---eecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 214 YIWTHNG--VRIG--N----MDLNE----LETPNI---NIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 214 ~~w~~~~--~~~~--~----~~~~~----~~~~~~---~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
+.|++.. .... . ..... ...... ......|.|.++..+|+|.|.|.|.|..|..
T Consensus 168 v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~ 236 (256)
T 3tf7_C 168 MYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQL 236 (256)
T ss_dssp EEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEE
T ss_pred EEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCcc
Confidence 6687621 1110 0 00000 000000 1123479999999999999999999987753
No 429
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.61 E-value=2.6e-16 Score=134.73 Aligned_cols=169 Identities=16% Similarity=0.151 Sum_probs=101.0
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEECC--EECc------CCC---CCCCCCCcEEEE----CCeEEEEcCCCCCCCeE
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRNG--ELLN------SET---LPLEDQDRYFIQ----DNVLTIRYLNPERDPAM 63 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~~--~~l~------~~~---~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~ 63 (505)
+.+|++++|.|.+.+. +...+.|+|.. ..+. ... ......+|+.+. ..+|.|.+++ .+|+|.
T Consensus 11 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~-~~D~G~ 89 (215)
T 3nl4_H 11 VTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPT-TEDTAT 89 (215)
T ss_dssp ECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCC-GGGCEE
T ss_pred EcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCC-cccCEE
Confidence 4689999999999863 36889999842 1100 000 000123566553 2369999999 999999
Q ss_pred EEEEEEcccCc----eEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCCC--CCeEEEEECCEEecCCC
Q psy14886 64 YQCRAKNQLKT----RYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAAP--KPKFVWKKDGNIIGSGG 134 (505)
Q Consensus 64 Y~C~~~~~~~~----~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g~~~~~~~ 134 (505)
|.|.+.+..+. ....+.|.|.. .+|.+...+ +...+.+|+.++|.|.+.+.+ ...+.|+++|..+....
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~ 167 (215)
T 3nl4_H 90 YFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLA--PCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRT 167 (215)
T ss_dssp EEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEEC--CCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred EEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEec--CCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEe
Confidence 99999886542 22245666652 133332111 111356799999999998853 34788999886443111
Q ss_pred -cEEEeeCCCEEE---cCCCCCCCEEEEEEEEcCCCceeeeEE
Q psy14886 135 -RRKIFENGNLLI---SPVSRDDSGIYSCTATNVHGMDESKGR 173 (505)
Q Consensus 135 -~~~~~~~~~l~i---~~v~~~d~G~y~C~~~~~~g~~~~~~~ 173 (505)
......++.+.+ ..+...| |.|+|.|.|..+.......
T Consensus 168 ~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~ 209 (215)
T 3nl4_H 168 FPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKT 209 (215)
T ss_dssp CCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEE
T ss_pred cCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEe
Confidence 111223455554 4456667 9999999998776554443
No 430
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.60 E-value=1.9e-16 Score=135.70 Aligned_cols=161 Identities=16% Similarity=0.199 Sum_probs=102.4
Q ss_pred eeCCCeEEEEeecCCC---CC-CeEEEEECCEEecCCCcE--------EEeeCCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 101 AGEGGNVTIFCNPEAA---PK-PKFVWKKDGNIIGSGGRR--------KIFENGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 101 v~~g~~v~l~C~~~~~---p~-~~i~W~~~g~~~~~~~~~--------~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
+.+|++++|.|.+.+. |. +.|.|++++..+...... .......|.|.+++.+|+|.|+|.|.|..+..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 6789999999999876 33 699999999876532111 01112359999999999999999999987654
Q ss_pred --eeeEEE--EEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCC---
Q psy14886 169 --ESKGRL--IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG--- 241 (505)
Q Consensus 169 --~~~~~l--~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~--- 241 (505)
...+.+ .+..+|.+....+.... ..|+.+.|.|.+.+..++.+.+.|+++|..+..... .......++
T Consensus 103 ~~~~~v~~~~~~~~~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~----~~~~~~~~gt~~ 177 (218)
T 2rgs_A 103 PIERTISKIKGLVRAPQVYILPPPAEQ-LSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKD----TAPVLDSDGSYF 177 (218)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGG-TTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEE----CCCEECTTSCEE
T ss_pred cceEEEeecCCCCCCCEEEEECCChHH-hcCCceEEEEEEEeeeCCCcEEEEEECCEeccCcee----cccEECCCCCEE
Confidence 222211 22334444333222221 248899999999985444457889999988743210 000111222
Q ss_pred ---eEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 242 ---LLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 242 ---~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.|.+.....++.|.|+|.|.|....
T Consensus 178 ~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 178 IYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred EEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 3444444444689999999997654
No 431
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=2.2e-15 Score=114.57 Aligned_cols=108 Identities=17% Similarity=0.193 Sum_probs=86.7
Q ss_pred CcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceee
Q psy14886 368 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 447 (505)
Q Consensus 368 G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 447 (505)
|.|++|... .+.|.+..| .+|.++.+...+.++|.|.|+++ .+ +.|++|+|+|+..+...|...... ..
T Consensus 1 G~g~~S~~~-~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p--~~--~~i~~Y~v~~~~~~~~~~~~~~~~-----~~ 69 (115)
T 1x5z_A 1 GSSGSSGDI-QVITQTGVP-GQPLNFKAEPESETSILLSWTPP--RS--DTIANYELVYKDGEHGEEQRITIE-----PG 69 (115)
T ss_dssp CCCCCCCCC-CCCCCSCCC-CCCEEEEEECSSSSEEEEEEECC--SC--CCCCEEEECBEESSSCCCBCCEEC-----SS
T ss_pred CCCCCCCCE-EEECCCCCC-CCCccCEeeeCCCCEEEEEEcCC--CC--CCccEEEEEEEeCCCCCceEEecC-----CC
Confidence 566666664 666766666 59999999988999999999984 22 389999999999876666322211 23
Q ss_pred EEEEcCCccceeeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 448 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 448 ~~~~l~~L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
+.+.|.+|.|++.|.|+|+|+|..|.|++|+.+.+.|.+
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 108 (115)
T 1x5z_A 70 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 108 (115)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred cEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCC
Confidence 678899999999999999999999999999999998864
No 432
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.60 E-value=8.3e-15 Score=128.37 Aligned_cols=167 Identities=18% Similarity=0.215 Sum_probs=108.5
Q ss_pred ceEEeeCCCeEEEEeecCCCC-----CCeEEEEEC--CEE---ec---------CCCcEEEeeCC---CEEEcCCCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-----KPKFVWKKD--GNI---IG---------SGGRRKIFENG---NLLISPVSRDDS 154 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-----~~~i~W~~~--g~~---~~---------~~~~~~~~~~~---~l~i~~v~~~d~ 154 (505)
..+.+.+|++++|.|.+.+.+ .+.+.|+++ +.. +. ...++.....+ +|.|.+++.+|+
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 88 (247)
T 1svz_A 9 LYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL 88 (247)
T ss_dssp SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHC
Confidence 456789999999999998887 689999983 221 11 12344443322 599999999999
Q ss_pred EEEEEEEEcCCCcee-eeEEEEEEeCC------------eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCC-
Q psy14886 155 GIYSCTATNVHGMDE-SKGRLIVLHGP------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG- 220 (505)
Q Consensus 155 G~y~C~~~~~~g~~~-~~~~l~v~~~p------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~- 220 (505)
|.|.|.+.+..+... ..+.|.|..++ ......+....+..|+.++|.|.+.+.+.+...+.|++++
T Consensus 89 G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~ 168 (247)
T 1svz_A 89 GIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAP 168 (247)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECT
T ss_pred EEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCC
Confidence 999999998755422 23567776542 2222223345688999999999999875444567798852
Q ss_pred -EEec------CCC-C-----CcccCCeeee----cCCeEEEecCCCCCCEEEEEEEEec
Q psy14886 221 -VRIG------NMD-L-----NELETPNINI----DGGLLEITNASFADAGEYECVVKST 263 (505)
Q Consensus 221 -~~~~------~~~-~-----~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~n~ 263 (505)
..+. ... . .......... ....|.|.+++.+|+|.|.|.|.|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 169 GGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp TCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 1110 000 0 0000111111 1248999999999999999999985
No 433
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.60 E-value=1.9e-14 Score=123.73 Aligned_cols=172 Identities=12% Similarity=0.216 Sum_probs=111.0
Q ss_pred eEEeeCCCeEEEEeecCCCC--CCeEEEEECC--E---Eec--------------CCCcEEEeeC-----CCEEEcCCCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--N---IIG--------------SGGRRKIFEN-----GNLLISPVSR 151 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g--~---~~~--------------~~~~~~~~~~-----~~l~i~~v~~ 151 (505)
.+.+.+|++++|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+ .+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (223)
T 1dee_B 9 GGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 88 (223)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCH
Confidence 35688999999999988765 4689999842 1 110 1245555432 2699999999
Q ss_pred CCCEEEEEEEEcCCC----c--eeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEe-CC
Q psy14886 152 DDSGIYSCTATNVHG----M--DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NG 220 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g----~--~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~-~~ 220 (505)
+|+|.|.|.+.+..| . ....+.|.|.. +|.+....+ ...+..|+.++|.|.+.+..+..+.+.|++ +|
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g 167 (223)
T 1dee_B 89 EDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVS-CENSNPSSTVAVGCLAQDFLPDSITFSWKYKNN 167 (223)
T ss_dssp GGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEEC-TTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTS
T ss_pred HHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecC-CcccCCCCcEEEEEEEEEEeCCCeEEEeEccCC
Confidence 999999999998653 1 11235777763 233322111 223457889999999998733345788999 87
Q ss_pred EEecCCC-CC-cccCCeeeecCCeEEEecCCC--CCCEEEEEEEEecCCcEEEEE
Q psy14886 221 VRIGNMD-LN-ELETPNINIDGGLLEITNASF--ADAGEYECVVKSTVGKISTKT 271 (505)
Q Consensus 221 ~~~~~~~-~~-~~~~~~~~~~~~~l~i~~~~~--~~~g~y~C~~~n~~g~~~~~~ 271 (505)
..+.... .. ......+ ...+.|.|..... +|.|.|+|.|.|..+.....+
T Consensus 168 ~~l~~~~~~~~~~~~~~~-~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 168 SDISSTRGFPSVLRGGKY-AATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp CBCSCEEECCCEEETTEE-EEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CccceeEECCccccCCeE-EEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 7664300 00 0001111 1234677777765 788999999999988765543
No 434
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.60 E-value=5.1e-15 Score=111.42 Aligned_cols=92 Identities=12% Similarity=0.126 Sum_probs=66.0
Q ss_pred CCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEc-CCCCcEEEEeeec--------CceeeEEEEcCCc
Q psy14886 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEY--------GNVGIAVVRIPSE 455 (505)
Q Consensus 385 ~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~l~~L 455 (505)
.||++|. +...+.++|+|.|++ +.+.+.+|++|.|+|+.. ....|........ .....+.+.+.+|
T Consensus 4 ~pP~~P~---v~~~~~~sv~L~W~~--P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 78 (115)
T 2ic2_A 4 YPPTPPN---VTRLSDESVMLRWMV--PRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDL 78 (115)
T ss_dssp CCCCCCE---EEECC---EEEEEEE--ECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSC
T ss_pred CCCCcCE---eEEEeCCEEEEEEcC--CCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCC
Confidence 4566775 556788999999999 455568999999999998 4678986654331 1234567899999
Q ss_pred cceeeEEEEEEEecCCCCCCCCceEE
Q psy14886 456 FYYTEYEVKVQAINDVGPGPESEVVT 481 (505)
Q Consensus 456 ~p~~~Y~~~v~a~n~~G~g~~s~~~~ 481 (505)
.|++.|.|||.|+|.+|.|.+|....
T Consensus 79 ~p~t~Y~FRV~A~N~~G~~~pS~~S~ 104 (115)
T 2ic2_A 79 KPQHTYRFRILAVYSNNDNKESNTSA 104 (115)
T ss_dssp CSSEEEEEEEEEEETTSCEEECCCCC
T ss_pred CCCCEEEEEEEEEeCCCCCCCCCCCC
Confidence 99999999999999999865554433
No 435
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.4e-15 Score=114.04 Aligned_cols=98 Identities=14% Similarity=0.219 Sum_probs=77.8
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEE
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 462 (505)
+..|+.|+.++.....+.++|.|.|++ +.+.+++|.+|.|+|+..+...|...... ..+.+.|.+|.|++.|.
T Consensus 7 ~~~P~~P~~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----~~~~~~v~~L~p~t~Y~ 79 (110)
T 2db8_A 7 GPVPATPILQLEECCTHNNSATLSWKQ--PPLSTVPADGYILELDDGNGGQFREVYVG-----KETMCTVDGLHFNSTYN 79 (110)
T ss_dssp CCCCCCCBCCCCCCSCSSSEEEECCBC--CTTCCSCCSEEEEEECCSSSSCCEEEEEE-----SCSCEEEECCCSSSCCE
T ss_pred CCCCCCccccceeeccCCCEEEEEECC--CCCCCCCccEEEEEEEeCCCCceEEEEeC-----CcCEEEECCCCCCCEEE
Confidence 445555555665555678999999998 44556899999999998776778754421 23568899999999999
Q ss_pred EEEEEecCCCCCCCCceEEEeecce
Q psy14886 463 VKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 463 ~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
|||+|+|.+|.|++|+.+.+.|.+.
T Consensus 80 frV~A~n~~G~s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 80 ARVKAFNKTGVSPYSKTLVLQTSEG 104 (110)
T ss_dssp EEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEEEEeCCcCCCCCCCEEEEcCCC
Confidence 9999999999999999999888753
No 436
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.60 E-value=6.4e-15 Score=128.50 Aligned_cols=167 Identities=16% Similarity=0.201 Sum_probs=107.7
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC--E---Eec---------CCCcEEEeeC---CCEEEcCCCCCCCEEEEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--N---IIG---------SGGRRKIFEN---GNLLISPVSRDDSGIYSC 159 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~---~~~---------~~~~~~~~~~---~~l~i~~v~~~d~G~y~C 159 (505)
..+.+.+|++++|.|.+.+.|.+.+.|+++. . .+. ...++..... .+|.|.+++.+|+|.|.|
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (242)
T 2znx_A 9 ATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFC 88 (242)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEE
Confidence 4467899999999999999888899999842 1 111 1234444322 269999999999999999
Q ss_pred EEEcCCCcee-eeEEEEEEeCCe------------eeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeC--CEEec
Q psy14886 160 TATNVHGMDE-SKGRLIVLHGPS------------YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIG 224 (505)
Q Consensus 160 ~~~~~~g~~~-~~~~l~v~~~p~------------~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~--~~~~~ 224 (505)
.+.+..+... ....|.|..+|. .....+....+..|+.++|.|.+.+.+.+...+.|+++ +..+.
T Consensus 89 ~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~ 168 (242)
T 2znx_A 89 QQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLE 168 (242)
T ss_dssp EECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEE
T ss_pred eEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcE
Confidence 9998754322 235677765442 11122233458899999999999887643446779874 22110
Q ss_pred ------CCCCC---cccCCeeee------cCCeEEEecCCCCCCEEEEEEEEec
Q psy14886 225 ------NMDLN---ELETPNINI------DGGLLEITNASFADAGEYECVVKST 263 (505)
Q Consensus 225 ------~~~~~---~~~~~~~~~------~~~~l~i~~~~~~~~g~y~C~~~n~ 263 (505)
..... .....++.. ....|.|.++..+|+|.|.|.|.|.
T Consensus 169 ~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 169 YMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred EEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 00000 000111111 1237999999999999999999873
No 437
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.60 E-value=4e-15 Score=130.65 Aligned_cols=175 Identities=15% Similarity=0.283 Sum_probs=110.9
Q ss_pred EEeeCCCeEEEEeecCCC--CCCeEEEEECC--E---Ee--------------cCCCcEEEeeCC-----CEEEcCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAA--PKPKFVWKKDG--N---II--------------GSGGRRKIFENG-----NLLISPVSRD 152 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~--p~~~i~W~~~g--~---~~--------------~~~~~~~~~~~~-----~l~i~~v~~~ 152 (505)
+.+.+|++++|.|.+.+. +...+.|++.. . .+ ...+++.+..+. +|.|.+++.+
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (253)
T 3liz_H 10 GLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSE 89 (253)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGG
T ss_pred EEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 568899999999998763 35689999832 1 11 012344444322 3999999999
Q ss_pred CCEEEEEEEEcCC----CceeeeEEEEEE----eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEec
Q psy14886 153 DSGIYSCTATNVH----GMDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224 (505)
Q Consensus 153 d~G~y~C~~~~~~----g~~~~~~~l~v~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~ 224 (505)
|+|.|.|.+.+.. ........|.|. ..|.+... .....+..|+.+.|.|.+.+..+..+.+.|.+++....
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~ 168 (253)
T 3liz_H 90 DTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSG 168 (253)
T ss_dssp GCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEE-CC------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTT
T ss_pred hCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEe-cCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecc
Confidence 9999999998752 222333567775 23333222 23334567999999999998544346888999876321
Q ss_pred CCCCC-cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEEc
Q psy14886 225 NMDLN-ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 276 (505)
Q Consensus 225 ~~~~~-~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v~ 276 (505)
..... ..... .....+.|.|.....++ |.|+|.|.|..+.......+.+.
T Consensus 169 ~~~~~~~~~~g-~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 169 VHTFPAVLQSD-LYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp EEECCCEEETT-EEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred eEeCCccccCC-eEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 11000 00001 11223578888888888 99999999999887777766655
No 438
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.60 E-value=2.5e-15 Score=129.76 Aligned_cols=171 Identities=15% Similarity=0.232 Sum_probs=108.2
Q ss_pred EEeeCCCeEEEEeecCCCCC----CeEEEEEC--CEEe----c------------CCCcEEEee-----CCCEEEcCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAPK----PKFVWKKD--GNII----G------------SGGRRKIFE-----NGNLLISPVSR 151 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p~----~~i~W~~~--g~~~----~------------~~~~~~~~~-----~~~l~i~~v~~ 151 (505)
+.+.+|++++|.|.+.+.+. +.+.|+++ +..+ . ...++.+.. +.+|.|.+++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (228)
T 3bae_H 10 GLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDT 89 (228)
T ss_dssp SEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCG
T ss_pred eeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCc
Confidence 46889999999999988764 79999884 2211 0 123454442 13699999999
Q ss_pred CCCEEEEEEEEcCCC------c---eeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEe
Q psy14886 152 DDSGIYSCTATNVHG------M---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 218 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g------~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~ 218 (505)
+|+|.|.|.+.+..| . ....+.|.|.. +|.+... ++...+..|+.+.|.|.+.+..+..+.+.|++
T Consensus 90 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~-~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~ 168 (228)
T 3bae_H 90 ADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPL-APVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS 168 (228)
T ss_dssp GGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEE-CC-----CCSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEe-cccccccCCCCEEEEEEEccEeCCCEEEEEee
Confidence 999999999998764 1 11236777763 2333322 22234567899999999998633235788998
Q ss_pred CCEEecCCCCC-cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEE
Q psy14886 219 NGVRIGNMDLN-ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 272 (505)
Q Consensus 219 ~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~ 272 (505)
++..+...... .... ......+.|.|.....++ |.|+|.|.|..|.......
T Consensus 169 ~~~~~~~~~~~~~~~~-~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 169 GSLSSGVHTFPAVLQS-DLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp GTCCTTEEEEEEEEET-TEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CCcccCceEcCceeCC-CcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 87542110000 0000 111123468888887766 9999999999887654433
No 439
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.60 E-value=3.6e-15 Score=128.54 Aligned_cols=168 Identities=15% Similarity=0.280 Sum_probs=108.7
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEe-----------------cCCCcEEEeeC-----CCEEEcCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNII-----------------GSGGRRKIFEN-----GNLLISPVSRD 152 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~-----------------~~~~~~~~~~~-----~~l~i~~v~~~ 152 (505)
..+.+|++++|.|.+.+.+ .+.+.|+++ +..+ ....++.+..+ .+|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (225)
T 1op3_H 10 GLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVE 89 (225)
T ss_dssp EEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 5688999999999998776 679999984 2211 01245555432 36999999999
Q ss_pred CCEEEEEEEEcCCC-----c---eeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCC
Q psy14886 153 DSGIYSCTATNVHG-----M---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 220 (505)
Q Consensus 153 d~G~y~C~~~~~~g-----~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~ 220 (505)
|+|.|.|.+.+..| . ....+.|.|.. +|.+....+.. .+..|+.+.|.|.+.+..+..+.+.|++++
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~ 168 (225)
T 1op3_H 90 DTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWNSGA 168 (225)
T ss_dssp GCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSCCEEECCTTS
T ss_pred hCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCCeEEEEecCC
Confidence 99999999998764 2 11346777765 23333222222 245789999999999873333578899987
Q ss_pred EEecCCCCCcc-cCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE
Q psy14886 221 VRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268 (505)
Q Consensus 221 ~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~ 268 (505)
..+........ .........+.|.|.....++ |.|+|.|.|..+...
T Consensus 169 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 169 LTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp CCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred CcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 65321000000 000011122467888887778 999999999776543
No 440
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.59 E-value=1.3e-15 Score=133.81 Aligned_cols=163 Identities=15% Similarity=0.200 Sum_probs=101.4
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEE---CcCCCC-C----CCCCC-cEEEECCe---EEEEcCCCCCCCeEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GEL---LNSETL-P----LEDQD-RYFIQDNV---LTIRYLNPERDPAMYQC 66 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~---l~~~~~-~----~~~~~-~~~~~~~~---L~i~~~~~~~d~G~Y~C 66 (505)
+.+|++++|.|.+.+.+...+.|+|. +.. +..... . ....+ |+.+.... |.|.+++ .+|+|.|+|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~-~~DsG~Y~C 91 (253)
T 3to4_D 13 VPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVAN-MSQGRTLYC 91 (253)
T ss_dssp EESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEES-CSSCEEEEE
T ss_pred EeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCC-hhhCeEEEE
Confidence 35899999999988878889999982 111 000000 0 00112 66654322 9999999 999999999
Q ss_pred EEEcccC----c--eEeeEEEEEEe-----cCCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEecCC
Q psy14886 67 RAKNQLK----T--RYSSAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSG 133 (505)
Q Consensus 67 ~~~~~~~----~--~~~~~~l~v~~-----~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~~~ 133 (505)
.+.+..+ . ......|.|.. .+|.+.+.. +....+..|+.++|.|.+.+ .|.+ .+.|+++|..+...
T Consensus 92 ~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~ 170 (253)
T 3to4_D 92 TSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 170 (253)
T ss_dssp EEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEE-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeC-CChhhcccCCceEEEEEEceEECCcEEEEEEECCEECCCc
Confidence 9986543 1 11234666663 222222111 01111234689999999988 5666 89999999988643
Q ss_pred CcEEEe--------eCC------CEEEcCCCCCC-CEEEEEEEEcCC
Q psy14886 134 GRRKIF--------ENG------NLLISPVSRDD-SGIYSCTATNVH 165 (505)
Q Consensus 134 ~~~~~~--------~~~------~l~i~~v~~~d-~G~y~C~~~~~~ 165 (505)
...... .++ .|.|......| .|.|+|.|.+..
T Consensus 171 ~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 171 VSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred eecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 211100 122 36666666666 789999999864
No 441
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.59 E-value=1e-15 Score=136.14 Aligned_cols=165 Identities=16% Similarity=0.229 Sum_probs=102.8
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEEC--CEECc---CC-CC-CC---CCCC-cEEEE-----CCeEEEEcCCCCCCCeEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRN--GELLN---SE-TL-PL---EDQD-RYFIQ-----DNVLTIRYLNPERDPAMY 64 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~--~~~l~---~~-~~-~~---~~~~-~~~~~-----~~~L~i~~~~~~~d~G~Y 64 (505)
+.+|++++|.|.+.+ +.+.+.|+|. +.... .. .. .. ...+ |+.+. +.+|.|.+++ .+|+|.|
T Consensus 39 v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~-~~D~G~Y 116 (270)
T 3qib_D 39 KGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSE-AGDSALY 116 (270)
T ss_dssp EETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCC-GGGCEEE
T ss_pred EcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCC-HhHCeEE
Confidence 358999999999865 6789999992 11100 00 00 00 0001 56553 3589999999 9999999
Q ss_pred EEEEEcccC----ceEeeEEEEEEec-----CCCccCCCCCceEEeeCCCeEEEEeecCC-CCCC-eEEEEECCEEecCC
Q psy14886 65 QCRAKNQLK----TRYSSAQLRVLTL-----KPSFKKRPLESETYAGEGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSG 133 (505)
Q Consensus 65 ~C~~~~~~~----~~~~~~~l~v~~~-----~p~~~~~~~~~~~~v~~g~~v~l~C~~~~-~p~~-~i~W~~~g~~~~~~ 133 (505)
.|.+.+... .....+.|.|... +|.+.+.. +....+..|+.++|.|.+.+ .|.+ .+.|+++|..+..+
T Consensus 117 ~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 195 (270)
T 3qib_D 117 LCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 195 (270)
T ss_dssp EEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEE-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEEEecCCCccceEECCcEEEEEccccccccCCceEEEC-CCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCC
Confidence 999986432 1223456777641 22222111 01112345999999999988 5656 89999999988653
Q ss_pred CcEEE--------eeCC------CEEEcCCCCCC-CEEEEEEEEcCCCce
Q psy14886 134 GRRKI--------FENG------NLLISPVSRDD-SGIYSCTATNVHGMD 168 (505)
Q Consensus 134 ~~~~~--------~~~~------~l~i~~v~~~d-~G~y~C~~~~~~g~~ 168 (505)
..... ..++ .|.|.....+| +|.|+|.|.+.....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 196 VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp EEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBCT
T ss_pred cccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCCC
Confidence 21110 0122 36677766666 999999999865443
No 442
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.59 E-value=4.5e-15 Score=111.66 Aligned_cols=103 Identities=11% Similarity=0.034 Sum_probs=78.3
Q ss_pred ccCCCCCCCCCCceeeeeccccccEEEEEEeCCcccc---CCC-CceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCC
Q psy14886 379 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ---NAP-NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 454 (505)
Q Consensus 379 ~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~---~~~-i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 454 (505)
+......|+.+|..+.+...+.++|.|.|++| .+++ +.+ |++|.|+....+...|...... ..+.+.+.+
T Consensus 8 ~~~~~~~pp~~P~~p~v~~vt~~Sv~LsW~~p-~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~~-----~~t~~~v~g 81 (120)
T 1wfu_A 8 MEPHKVVPLSKPHPPVVGKVTHHSIELYWDLE-QKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTG-----YATRHVVEG 81 (120)
T ss_dssp CCCTTCCCCCCCCCCBCCCEETTEEEEECTTT-SCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEE-----SCSEEEEES
T ss_pred EEEEeeCCCCCCCCceeceEECCEEEEEECCC-ccCCccCCCCceEEEEEEEecCCCCceEEEecC-----CccEEEECC
Confidence 34555666667777777778899999999983 3333 334 9999999433346677755432 124688999
Q ss_pred ccceeeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 455 EFYYTEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 455 L~p~~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
|.|++.|.|||+|+|.+|.|++|+.+.+.|.+.
T Consensus 82 L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 82 LEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp CCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred CCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 999999999999999999999999999988754
No 443
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.59 E-value=2.1e-14 Score=123.19 Aligned_cols=168 Identities=15% Similarity=0.250 Sum_probs=110.1
Q ss_pred eEEeeCCCeEEEEeecCCCC--CCeEEEEECC--E---Eec--------------CCCcEEEeeC-----CCEEEcCCCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--N---IIG--------------SGGRRKIFEN-----GNLLISPVSR 151 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g--~---~~~--------------~~~~~~~~~~-----~~l~i~~v~~ 151 (505)
.+.+.+|++++|.|.+.+.+ .+.+.|++.. . .+. ...++.+..+ .+|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRS 88 (220)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCG
T ss_pred CeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCCh
Confidence 36688999999999998765 5689999842 1 110 1245555432 2699999999
Q ss_pred CCCEEEEEEEEcCCCc---eeeeEEEEEEeC----CeeeeeCCCceEEEeeccEEEEEEeeecCCC-CeEEEEEeCCEEe
Q psy14886 152 DDSGIYSCTATNVHGM---DESKGRLIVLHG----PSYYEQLPPKITIAAHRNLQLRCSAHTEELL-DVAYIWTHNGVRI 223 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~---~~~~~~l~v~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~~~ 223 (505)
+|+|.|.|.+.+..+. ....+.|.|... |.+... + ...+..|+.++|.|.+.+..+. .+.+.|++++..+
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~-~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 89 EDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPL-T-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp GGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEE-C-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred hhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEe-e-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 9999999999987553 123357777642 222222 2 2234578999999999987332 4688899987654
Q ss_pred cCCCCC--cccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE
Q psy14886 224 GNMDLN--ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268 (505)
Q Consensus 224 ~~~~~~--~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~ 268 (505)
...... ......+ ...+.|.|......|.|.|+|.|.|..|...
T Consensus 167 ~~~~~~~~~~~~g~~-~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 167 TTVNFPPALASGGRY-TMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEECCCEECSSSCE-EEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ceEecCceECCCCCE-EEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 110000 0000111 1123577887778889999999999988754
No 444
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.59 E-value=2.4e-14 Score=126.21 Aligned_cols=180 Identities=17% Similarity=0.221 Sum_probs=111.2
Q ss_pred EEeeCCCeEEEEeecCCC--CCCeEEEEECC--E---Ee-------------cCCCcEEEeeCC-----CEEEcCCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAA--PKPKFVWKKDG--N---II-------------GSGGRRKIFENG-----NLLISPVSRDD 153 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~--p~~~i~W~~~g--~---~~-------------~~~~~~~~~~~~-----~l~i~~v~~~d 153 (505)
..+.+|++++|.|.+.+. +.+.+.|++.. . .+ ....++.+..+. +|.|.+++.+|
T Consensus 18 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 97 (257)
T 3gkz_A 18 SLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSED 97 (257)
T ss_dssp SEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred eEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhh
Confidence 458899999999998874 46799999832 1 11 012344444322 59999999999
Q ss_pred CEEEEEEEEcCCC----ceeeeEEEEEEeC-------------CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEE
Q psy14886 154 SGIYSCTATNVHG----MDESKGRLIVLHG-------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 216 (505)
Q Consensus 154 ~G~y~C~~~~~~g----~~~~~~~l~v~~~-------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w 216 (505)
+|.|.|.+.+..+ .......|.|... +..+...+....+..|+.++|.|.+.+.+.+ ..+.|
T Consensus 98 sG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~-~~v~W 176 (257)
T 3gkz_A 98 TATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSS-SHLYW 176 (257)
T ss_dssp CEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCG-GGEEE
T ss_pred CEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccc-eEEEE
Confidence 9999999998622 1223356777554 2233344556778899999999999887654 24568
Q ss_pred EeC--CEEec---CCCCC----cccCCeeee--cCCeEEEecCCCCCCEEEEEEEEecCCcE-EEEEEEEEcCCC
Q psy14886 217 THN--GVRIG---NMDLN----ELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 279 (505)
Q Consensus 217 ~~~--~~~~~---~~~~~----~~~~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~n~~g~~-~~~~~l~v~~~p 279 (505)
+++ +.... ..... ......... ....|.|.++..+|+|.|.|.|.+..... ..-..|.|...|
T Consensus 177 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~ 251 (257)
T 3gkz_A 177 YQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRAP 251 (257)
T ss_dssp EEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC-
T ss_pred EEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeCC
Confidence 763 22111 00000 000011111 22369999999999999999998754332 223456665443
No 445
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=3.8e-15 Score=111.91 Aligned_cols=99 Identities=13% Similarity=0.118 Sum_probs=77.6
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCC----CceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccce
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 458 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~----i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 458 (505)
+..|+.+|.++++...+.++|.|+|.++. ..++. +.+|.|+|+......+...... .....+.|.+|+|+
T Consensus 5 ~~~pp~~P~~l~~~~~s~tsi~lsW~~p~--~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~----~~~~~~~i~gL~P~ 78 (113)
T 1x5j_A 5 SSGPMMPPVGVQASILSHDTIRITWADNS--LPKHQKITDSRYYTVRWKTNIPANTKYKNAN----ATTLSYLVTGLKPN 78 (113)
T ss_dssp SCCCCCCCEEEEEEEEETTEEEEEEECTT--SCSSSCCCSSCEEEEEECBSSSSSCCCEECC----BCSSEEEEESCCTT
T ss_pred cCCCCCCCcceEEEEecCCEEEEEecCCC--CccccccCcCceEEEEEEECCCCCeEEEEEe----cCcCEEEeCCCCCC
Confidence 46778899999999999999999999843 33344 4499999998433333322222 23457899999999
Q ss_pred eeEEEEEEEecCCCCCCCCceEEEeecce
Q psy14886 459 TEYEVKVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 459 ~~Y~~~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
|.|.|+|+|+|.+|.|++|+.+.++|.+.
T Consensus 79 T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 79 TLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp CEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 99999999999999999999999988754
No 446
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=6e-15 Score=112.76 Aligned_cols=93 Identities=16% Similarity=0.139 Sum_probs=77.1
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEE
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 462 (505)
...+|.+|.++.+...+.+++.|.|+++ ..+++.+|++|.|+|+..+...|...... ...+.+.+.+|.|++.|.
T Consensus 14 ~~~~P~~P~~l~~~~~~~~sv~l~W~~p-~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~----~~~~~~~v~~L~p~t~Y~ 88 (120)
T 2yux_A 14 IIDRPGPPQIVKIEDVWGENVALTWTPP-KDDGNAAITGYTIQKADKKSMEWFTVIEH----YHRTSATITELVIGNEYY 88 (120)
T ss_dssp CCCCCCCCSCEEEEEEETTEEEEEECCC-SCCCSSCCCCCCEEEEETTTCCCEEEESS----CCSSCCEECCCCSSEEEE
T ss_pred eecCCCcCCCCEEEEecCCEEEEEEcCC-CcCCCCCceEEEEEEEECCCCceEEeeec----CCcCEEEECCCCCCCEEE
Confidence 3456679999999888899999999983 45566789999999999888888865422 234578899999999999
Q ss_pred EEEEEecCCCCCCCCceE
Q psy14886 463 VKVQAINDVGPGPESEVV 480 (505)
Q Consensus 463 ~~v~a~n~~G~g~~s~~~ 480 (505)
|||.|+|.+|.|++|+..
T Consensus 89 frV~A~n~~G~s~~S~~s 106 (120)
T 2yux_A 89 FRVFSENMCGLSEDATMT 106 (120)
T ss_dssp EEECCCSSSCSCSSCEEC
T ss_pred EEEEEeeCCcCCCCccCc
Confidence 999999999999999754
No 447
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=3.9e-15 Score=112.03 Aligned_cols=98 Identities=12% Similarity=0.086 Sum_probs=79.1
Q ss_pred CCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEE
Q psy14886 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463 (505)
Q Consensus 384 ~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~ 463 (505)
..+|.+|.++.+...+.++|.|.|++ |..+++.+|++|.|+|+..+...|...... ....+.+.+.+|.|++.|.|
T Consensus 5 ~~~P~~P~~l~~~~~~~~sv~l~W~~-p~~~g~~~i~~Y~v~~~~~~~~~w~~~~~~---~~~~~~~~v~~L~p~t~Y~f 80 (110)
T 2yuw_A 5 SSGTSPPTLLTVDSVTDTTVTMRWRP-PDHIGAAGLDGYVLEYCFEGTEDWIVANKD---LIDKTKFTITGLPTDAKIFV 80 (110)
T ss_dssp CCCSCCCEEEEEEEECSSCEEEEEEC-CSSCCSSCEEEEEEEEEETTCSSEEECCSS---CCCSSEEEECSCCTTCEEEE
T ss_pred CCCCCCCCccEEEeccCCeEEEEECC-CCCCCCCCccEEEEEEEECCCccceEeccc---cCccCEEEECCCCCCCEEEE
Confidence 34567899999988889999999998 344566789999999999887788754322 12346789999999999999
Q ss_pred EEEEecCCCCCCCCceEEEeec
Q psy14886 464 KVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 464 ~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
||+|+|.+|.|++|+.....+.
T Consensus 81 rV~A~n~~G~s~~S~~~~~v~~ 102 (110)
T 2yuw_A 81 RVKAVNAAGASEPKYYSQPILV 102 (110)
T ss_dssp EEEEEETTEECCCEECSSCEEC
T ss_pred EEEEEcCCcCCCCcCCCCCEEe
Confidence 9999999999999987654443
No 448
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.57 E-value=8.6e-15 Score=113.34 Aligned_cols=118 Identities=29% Similarity=0.458 Sum_probs=96.2
Q ss_pred EEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCC--CCCeEEeeeccccceeeeecCceeeE
Q psy14886 269 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEHVIGKEVDRYTGRKEAS 346 (505)
Q Consensus 269 ~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~ 346 (505)
..+.+.+..+|.+|.++.+.....+++.|+|.++.+++.++.+|.|+|+... ...|....... +.....
T Consensus 7 ~~~~~~v~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~---------~~~~~~ 77 (127)
T 1uey_A 7 GPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVS---------GTQTTA 77 (127)
T ss_dssp CCCCCCCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEE---------SSCCEE
T ss_pred EEEEEEeecCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeeeC---------CCceEE
Confidence 4456667889999999999889999999999998778899999999998764 46787653221 222335
Q ss_pred EeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeee
Q psy14886 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 396 (505)
Q Consensus 347 ~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~ 396 (505)
+.+ |.+++.|.|||+|.|..|.|.+|.....+.|.+..|..+|.++++.
T Consensus 78 i~~-L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~~ 126 (127)
T 1uey_A 78 QLN-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPSS 126 (127)
T ss_dssp EEC-CCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCCC
T ss_pred Eec-CCCCCEEEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEec
Confidence 555 9999999999999999999999988667899999999999988764
No 449
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=3.4e-14 Score=126.95 Aligned_cols=177 Identities=18% Similarity=0.294 Sum_probs=114.1
Q ss_pred eEEeeCCCeEEEEeecCCCC--CCeEEEEECC--EEec-----------------CCCcEEEeeC-----CCEEEcCCCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKDG--NIIG-----------------SGGRRKIFEN-----GNLLISPVSR 151 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~g--~~~~-----------------~~~~~~~~~~-----~~l~i~~v~~ 151 (505)
...+.+|++++|.|.+.+.+ .+.+.|++++ ..+. ...++.+..+ .+|.|.+++.
T Consensus 35 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 114 (282)
T 1qok_A 35 AELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTS 114 (282)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCCh
Confidence 45789999999999998775 5799999853 1110 1245544431 3699999999
Q ss_pred CCCEEEEEEEEcCCCc---e--eeeEEEEEEeCC--------------eeeeeCCCceEEEeeccEEEEEEeeecCCCCe
Q psy14886 152 DDSGIYSCTATNVHGM---D--ESKGRLIVLHGP--------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 212 (505)
Q Consensus 152 ~d~G~y~C~~~~~~g~---~--~~~~~l~v~~~p--------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 212 (505)
+|+|.|.|.+.+..|. . ...+.|.|...| ..+...+....+..|+.++|.|.+.+.+ +
T Consensus 115 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~-- 191 (282)
T 1qok_A 115 EDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-S-- 191 (282)
T ss_dssp GGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-S--
T ss_pred hhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-c--
Confidence 9999999999998661 1 123567776543 2223334566788999999999998887 5
Q ss_pred EEEEEe--CCEEecC-----CCCCcccCCee----eecCCeEEEecCCCCCCEEEEEEEEecCCc-EEEEEEEEEcC
Q psy14886 213 AYIWTH--NGVRIGN-----MDLNELETPNI----NIDGGLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVEG 277 (505)
Q Consensus 213 ~~~w~~--~~~~~~~-----~~~~~~~~~~~----~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~-~~~~~~l~v~~ 277 (505)
.+.|++ ++..+.. .........++ ......|.|.++..+|+|.|.|.|.+..+. ......|.|..
T Consensus 192 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 192 YMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp CCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred eEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 456988 4443210 00000000111 112347999999999999999999875432 22345566654
No 450
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.57 E-value=4.9e-14 Score=121.90 Aligned_cols=175 Identities=15% Similarity=0.263 Sum_probs=108.5
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEEC--CE---Eec-------------CCCcEEEeeC---C--CEEEcCCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GN---IIG-------------SGGRRKIFEN---G--NLLISPVSRDD 153 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~---~~~-------------~~~~~~~~~~---~--~l~i~~v~~~d 153 (505)
+.+.+|++++|.|.+.+.+ ...+.|++. +. .+. ...++.+..+ + +|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (232)
T 1dn0_B 10 GLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAAD 89 (232)
T ss_dssp CEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCccc
Confidence 4688999999999987764 568999984 22 110 1245555432 1 69999999999
Q ss_pred CEEEEEEEEcCC--Cc----eeeeEEEEEEeC----CeeeeeCCCceEEEee-ccEEEEEEeeecCCCCeEEEEEe-CCE
Q psy14886 154 SGIYSCTATNVH--GM----DESKGRLIVLHG----PSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH-NGV 221 (505)
Q Consensus 154 ~G~y~C~~~~~~--g~----~~~~~~l~v~~~----p~~~~~~~~~~~~~~g-~~~~l~C~~~~~~~~~~~~~w~~-~~~ 221 (505)
+|.|.|.+.+.. +. ......|.|... |.+....+ ...+..| +.++|.|.+.+..+..+.+.|++ +|.
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p-~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~ 168 (232)
T 1dn0_B 90 TAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVS-CENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNS 168 (232)
T ss_dssp CEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEEC-C------CCSEEEEEEEEEEBSSCCEEEEEETTSC
T ss_pred CEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEecc-ccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCC
Confidence 999999998422 11 123357777642 33322111 2234467 89999999998633335788999 887
Q ss_pred EecCCC-C-CcccCCeeeecCCeEEEecCCC--CCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 222 RIGNMD-L-NELETPNINIDGGLLEITNASF--ADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 222 ~~~~~~-~-~~~~~~~~~~~~~~l~i~~~~~--~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
.+.... . ...... .....+.|.|..... +|.|.|+|.|.|..+.......+.+
T Consensus 169 ~l~~~~~~~~~~~~~-~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 169 DISSTRGFPSVLRGG-KYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp EECCEEECCCEEETT-EEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC
T ss_pred ceeeEEECCccccCC-cEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCC
Confidence 764300 0 000011 111234677877776 7899999999999988665555544
No 451
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.57 E-value=1.3e-15 Score=129.42 Aligned_cols=160 Identities=18% Similarity=0.256 Sum_probs=97.9
Q ss_pred eCCCeEEEEeecCCCC----CCeEEEEECCEEecCCC--cEEEeeCCCEEEcC---CCC---CCCEEEEEEEEcCCCcee
Q psy14886 102 GEGGNVTIFCNPEAAP----KPKFVWKKDGNIIGSGG--RRKIFENGNLLISP---VSR---DDSGIYSCTATNVHGMDE 169 (505)
Q Consensus 102 ~~g~~v~l~C~~~~~p----~~~i~W~~~g~~~~~~~--~~~~~~~~~l~i~~---v~~---~d~G~y~C~~~~~~g~~~ 169 (505)
.+|+++.|.|.+.|.+ ...|.|++++..+.... ......++.+.+.. +.. .|+|.|+|.|.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 6899999999998764 34999999998775421 11223345554432 233 449999999999877543
Q ss_pred eeEEE----EEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCC----
Q psy14886 170 SKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG---- 241 (505)
Q Consensus 170 ~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~---- 241 (505)
....+ .+..+|.+....+....+ .+..+.|.|.+.+.+++.+.+.|+++|..+..... .......++
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~----~~~~~~~~gt~~~ 170 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDEL-TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKT----TPPVLDSDGSFFL 170 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEE----CCCEECTTSCEEE
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHh-cCCcEEEEEEEeCeECCCeEEEEEECCeeccCccc----cCceECCCCCEEE
Confidence 32233 222344433332222222 34559999999997555568889999988753210 001111122
Q ss_pred --eEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 242 --LLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 242 --~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.|.+.....++.|.|+|.|.|....
T Consensus 171 ~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 171 YSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 3444444445789999999997653
No 452
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.57 E-value=4.1e-15 Score=130.55 Aligned_cols=165 Identities=16% Similarity=0.256 Sum_probs=104.3
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--E--E-CcC--CCCC---CCCCCcEEEE-----CCeEEEEcCCCCCCCeEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--E--L-LNS--ETLP---LEDQDRYFIQ-----DNVLTIRYLNPERDPAMYQ 65 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~--~-l~~--~~~~---~~~~~~~~~~-----~~~L~i~~~~~~~d~G~Y~ 65 (505)
+.+|++++|.|.+. .+.+.+.|+|+. . . +.. .... ....+|+.+. ..+|.|.+++ .+|+|.|.
T Consensus 15 v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~-~~D~G~Y~ 92 (252)
T 1oga_E 15 RKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQ-KNPTAFYL 92 (252)
T ss_dssp EETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCC-SCCCEEEE
T ss_pred EcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCC-hhhCEEEE
Confidence 46899999999995 457899999953 1 1 100 0000 0123677664 2589999999 99999999
Q ss_pred EEEEccc---CceEeeEEEEEEe-----cCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCCCc
Q psy14886 66 CRAKNQL---KTRYSSAQLRVLT-----LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGGR 135 (505)
Q Consensus 66 C~~~~~~---~~~~~~~~l~v~~-----~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~~~ 135 (505)
|.+.+.. ........|.|.. .+|.+.+.. +....+.+|+.++|.|.+.+. |. +.+.|+++|..+.....
T Consensus 93 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~ 171 (252)
T 1oga_E 93 CASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVS 171 (252)
T ss_dssp EEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEE
T ss_pred EEEecCCccceeECCCEEEEEecccCCCCCCeEEEEC-CChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcc
Confidence 9998752 1111234566663 233332221 111123468999999999885 65 49999999998765322
Q ss_pred EE------E--eeCCC------EEEcCCCCC-CCEEEEEEEEcCCCce
Q psy14886 136 RK------I--FENGN------LLISPVSRD-DSGIYSCTATNVHGMD 168 (505)
Q Consensus 136 ~~------~--~~~~~------l~i~~v~~~-d~G~y~C~~~~~~g~~ 168 (505)
.. . ..+++ |.|...... |.|.|+|.+.|.....
T Consensus 172 ~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 219 (252)
T 1oga_E 172 TDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 219 (252)
T ss_dssp ECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred cccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 11 0 12233 666655543 6789999999875443
No 453
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.57 E-value=1.6e-14 Score=127.00 Aligned_cols=169 Identities=15% Similarity=0.241 Sum_probs=108.9
Q ss_pred ceEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEe------c-----------CCCcEEEeeC-----CCEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNII------G-----------SGGRRKIFEN-----GNLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~------~-----------~~~~~~~~~~-----~~l~i~~v~ 150 (505)
....+.+|++++|.|.+.+.+ .+.+.|+++ +..+ . ...++.+..+ .+|.|.+++
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 93 (261)
T 2xqy_G 14 GAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLT 93 (261)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCC
Confidence 346789999999999998776 579999985 2211 0 1235554432 369999999
Q ss_pred CCCCEEEEEEEEcCCCce---eeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEe
Q psy14886 151 RDDSGIYSCTATNVHGMD---ESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 223 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g~~---~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~ 223 (505)
.+|+|.|.|.+.+..+.. ...+.|.|.. +|.+....+ ...+..|+.++|.|.+.+..+..+.+.|++++..+
T Consensus 94 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p-~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~ 172 (261)
T 2xqy_G 94 SEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAP-VCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 172 (261)
T ss_dssp GGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECC-CCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred cccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCC-CccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcC
Confidence 999999999999864311 1235677764 233332222 23456789999999999863334588899987653
Q ss_pred cCCCC-CcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE
Q psy14886 224 GNMDL-NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268 (505)
Q Consensus 224 ~~~~~-~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~ 268 (505)
..... ..... ......+.|.|.....++ |.|+|.|.|......
T Consensus 173 ~~~~~~~~~~~-g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~ 216 (261)
T 2xqy_G 173 GVHTFPAVLQS-DLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK 216 (261)
T ss_dssp TEEECCCEEET-TEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred ceEecCceecC-CcEEEEEEEEEeccccCC-CEEEEEEEECCCCcc
Confidence 21100 00000 111223578888888777 999999999766543
No 454
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.57 E-value=7.3e-15 Score=127.80 Aligned_cols=163 Identities=15% Similarity=0.188 Sum_probs=102.1
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EECc------CCC--CCCCCCCcEEEEC-----CeEEEEcCCCCCCCeEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELLN------SET--LPLEDQDRYFIQD-----NVLTIRYLNPERDPAMYQ 65 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l~------~~~--~~~~~~~~~~~~~-----~~L~i~~~~~~~d~G~Y~ 65 (505)
+.+|++++|.|.+. .+.+.+.|+|++ ..+. ... ......+|+.+.. .+|.|.+++ .+|+|.|.
T Consensus 11 v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~-~~D~G~Y~ 88 (238)
T 1bec_A 11 AVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT-PSQTSVYF 88 (238)
T ss_dssp EETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC-GGGCEEEE
T ss_pred EeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC-cccCEEEE
Confidence 46899999999995 467899999953 1110 000 0001235665532 489999999 99999999
Q ss_pred EEEEcccC---c-e-EeeEEEEEEec-----CCCccCCCCCceEEeeCCCeEEEEeecCCC-CCC-eEEEEECCEEecCC
Q psy14886 66 CRAKNQLK---T-R-YSSAQLRVLTL-----KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGSG 133 (505)
Q Consensus 66 C~~~~~~~---~-~-~~~~~l~v~~~-----~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~~-~i~W~~~g~~~~~~ 133 (505)
|.+.+..+ . . .....|.|... +|.+.... +....+.+|+.++|.|.+.|. |.+ .+.|+++|..+..+
T Consensus 89 C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~ 167 (238)
T 1bec_A 89 CASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFE-PSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSG 167 (238)
T ss_dssp EEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEEC-CCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTT
T ss_pred EEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEEC-CChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCc
Confidence 99998632 1 1 12356777641 34333221 111224579999999999886 654 99999999988654
Q ss_pred CcE----EEeeCCCEE------EcCCCCC-CCEEEEEEEEcCCC
Q psy14886 134 GRR----KIFENGNLL------ISPVSRD-DSGIYSCTATNVHG 166 (505)
Q Consensus 134 ~~~----~~~~~~~l~------i~~v~~~-d~G~y~C~~~~~~g 166 (505)
... ....++++. |...... +.|.|+|.|.|...
T Consensus 168 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 168 VSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred eecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 221 112344433 3333333 36889999998643
No 455
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=5.9e-15 Score=109.70 Aligned_cols=77 Identities=25% Similarity=0.457 Sum_probs=66.8
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEE--EC--CeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFI--QD--NVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~--~~--~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
|.+|++++|.|.+.|.|.+.|+|+|||..|.. ..++.+ .+ .+|.|.+++ .+|+|.|+|.|.|..|...
T Consensus 25 v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~-------~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~N~~G~~~ 96 (107)
T 3knb_B 25 VVSGAEAELKCVVLGEPPPVVVWEKGGQQLAA-------SERLSFPADGAEHGLLLTAAL-PTDAGVYVCRARNAAGEAY 96 (107)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCC-------CSSEECCEETTEEEEEESSCC-GGGCEEEEEEEEETTEEEE
T ss_pred EeCCCcEEEEEEEEEecCCEEEEEECcccccc-------eeeEEEeecCceEEEEEecCC-hhhCEEEEEEEEECCCEEE
Confidence 46899999999999999999999999999973 345544 22 379999999 9999999999999999988
Q ss_pred eeEEEEEEe
Q psy14886 77 SSAQLRVLT 85 (505)
Q Consensus 77 ~~~~l~v~~ 85 (505)
..+.|.|..
T Consensus 97 ~~~~l~V~~ 105 (107)
T 3knb_B 97 AAAAVTVLE 105 (107)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEc
Confidence 889999885
No 456
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.56 E-value=4.3e-15 Score=111.94 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=78.6
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEE
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 462 (505)
+..+|.+|.++++...+.++|.|.|++ |..+++.+|++|.|+|+..+...|...... ....+.+.+.+|.|++.|.
T Consensus 5 p~~~P~~P~~l~~~~~~~~sv~l~W~~-p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~---~~~~~~~~v~~L~p~t~Y~ 80 (111)
T 1x5y_A 5 SSGPTSAPQHLTVEDVTDTTTTLKWRP-PDRIGAGGIDGYLVEYCLEGSEEWVPANKE---PVERCGFTVKDLPTGARIL 80 (111)
T ss_dssp CCSCCCCCEEEEEEEECSSEEEEEEEC-CSCCCSSCCCEEEEEEEETTCCCCEESSSS---CBSSSEEEEECCCTTCCEE
T ss_pred CCCCCcCCCCCEEEeccCCEEEEEECC-CCcCCCCcccEEEEEEEECCCCceEEcccc---CCcccEEEECCCCCCCEEE
Confidence 445667899999988889999999998 344555679999999999887788743321 1234678899999999999
Q ss_pred EEEEEecCCCCCCCCceEEEee
Q psy14886 463 VKVQAINDVGPGPESEVVTIWH 484 (505)
Q Consensus 463 ~~v~a~n~~G~g~~s~~~~~~t 484 (505)
|||+|+|.+|.|++|+.....+
T Consensus 81 frV~A~n~~G~s~~S~~~~~v~ 102 (111)
T 1x5y_A 81 FRVVGVNIAGRSEPATLLQPVT 102 (111)
T ss_dssp EEEEEEETTEECCCCCCSSCBC
T ss_pred EEEEEEcCCcCCCCccCCCCEE
Confidence 9999999999999998775443
No 457
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.56 E-value=1.9e-14 Score=125.48 Aligned_cols=177 Identities=15% Similarity=0.222 Sum_probs=109.5
Q ss_pred ceEEeeCCCeEEEEeecCCC--CCCeEEEEECC--EE---ec--------------CCCcEEEee-----CCCEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAA--PKPKFVWKKDG--NI---IG--------------SGGRRKIFE-----NGNLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~--p~~~i~W~~~g--~~---~~--------------~~~~~~~~~-----~~~l~i~~v~ 150 (505)
..+.+.+|++++|.|.+.+. +...+.|+++. .. +. ...++.+.. +.+|.|.+++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 88 (242)
T 1hxm_B 9 ISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVE 88 (242)
T ss_dssp SEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCC
T ss_pred ceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCC
Confidence 45778999999999998775 56799999832 21 10 234555442 2359999999
Q ss_pred CCCCEEEEEEEEcCCC-c------eeeeEEEEEEeC-------CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEE
Q psy14886 151 RDDSGIYSCTATNVHG-M------DESKGRLIVLHG-------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 216 (505)
Q Consensus 151 ~~d~G~y~C~~~~~~g-~------~~~~~~l~v~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w 216 (505)
.+|+|.|.|.+.+... . ......|.|... |......+....+..|+.+.|.|.+.+..+..+.+.|
T Consensus 89 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 168 (242)
T 1hxm_B 89 KQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHW 168 (242)
T ss_dssp GGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEEEE
T ss_pred cccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEEEE
Confidence 9999999999987631 1 112357777653 2222221222334468899999999986433468889
Q ss_pred EeCCE-EecCCC-CCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEEEEEEE
Q psy14886 217 THNGV-RIGNMD-LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 275 (505)
Q Consensus 217 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~~~l~v 275 (505)
.+++. .+.... .............+.|.|..... + |.|+|.|.|..+.......+.+
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 169 EEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred EcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 99886 443211 00000000111123577766553 3 9999999999887543333433
No 458
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.56 E-value=1.3e-14 Score=135.02 Aligned_cols=161 Identities=12% Similarity=0.182 Sum_probs=105.2
Q ss_pred CCCCceEEEEEEecc---C-CCeEEEEECCEECcCCC--CCC-CCCCcEEEECCeEEEEcCCCCCCCeEEEEEEEcccCc
Q psy14886 2 DNQADLTWTCEAFGV---P-DVTYSWFRNGELLNSET--LPL-EDQDRYFIQDNVLTIRYLNPERDPAMYQCRAKNQLKT 74 (505)
Q Consensus 2 ~~G~~~~l~C~~~~~---p-~~~~~W~~~~~~l~~~~--~~~-~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~~~~~~~~ 74 (505)
.+|++++|.|.+.+. | ...|.|+|++..+.... ... ...+.+ ...+.|.|..++ .+|+|.|+|.+.+..+.
T Consensus 181 ~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~-~~~s~L~I~~~~-~~D~g~Y~C~~~~~~~~ 258 (376)
T 2aty_A 181 TITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTF-RSVSELPIMHQD-WLNGKEFKCRVNSAAFP 258 (376)
T ss_pred eeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcE-EEEEEEEechHh-ccCCCEEEEEEecCCCC
Confidence 579999999999886 3 25799999987653211 000 111222 234579999999 99999999999987654
Q ss_pred eEeeEEEEE---EecCCCccCCCCCceEEeeCCCeEEEEeecCCC-C-CCeEEEEECCEEecCCCcE--EEeeCCC----
Q psy14886 75 RYSSAQLRV---LTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-P-KPKFVWKKDGNIIGSGGRR--KIFENGN---- 143 (505)
Q Consensus 75 ~~~~~~l~v---~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p-~~~i~W~~~g~~~~~~~~~--~~~~~~~---- 143 (505)
......+.+ ...+|.+.+.+.. ....+|+.++|.|.+.|. | .+.|+|+++|..+...... ....+++
T Consensus 259 ~~~~~~v~~~~~~~~~P~v~v~~~~--~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~ 336 (376)
T 2aty_A 259 APIEKTISKTKGRPKAPQLYTIPPP--KEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVY 336 (376)
T ss_pred CceEEEEcCCCCCCcCCeEEeeCCC--HHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEE
Confidence 332222211 1135555544422 223458899999999986 3 4599999999887432111 1122332
Q ss_pred --EEEcCCCCCCCEEEEEEEEcCCC
Q psy14886 144 --LLISPVSRDDSGIYSCTATNVHG 166 (505)
Q Consensus 144 --l~i~~v~~~d~G~y~C~~~~~~g 166 (505)
|.|.....+|.|.|+|.|.+..-
T Consensus 337 s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 337 SKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 66777667789999999987643
No 459
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=1.3e-14 Score=108.55 Aligned_cols=96 Identities=14% Similarity=0.194 Sum_probs=75.6
Q ss_pred CCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceee
Q psy14886 381 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460 (505)
Q Consensus 381 t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 460 (505)
|.++.|..|+ +.+...+.++|.|.|++ +.+.++.|++|+|+|+..+...|....... ..+.+.|.+|.|++.
T Consensus 3 T~~~~P~~p~--~~v~~~~~~sv~l~W~~--p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p~t~ 74 (107)
T 2dn7_A 3 SGSSGPGRPT--MMISTTAMNTALLQWHP--PKELPGELLGYRLQYCRADEARPNTIDFGK----DDQHFTVTGLHKGTT 74 (107)
T ss_dssp TCCCCCCCCE--EEEEECSTTEEEEEEEC--CSSCSSCCCEEEEEEEETTCSSCEEEEEET----TCCEEEEECCCTTCE
T ss_pred CCCCCCCCCc--EeEEecCCCEEEEEECC--CCCCCCceeEEEEEEEECCCCCCEEEEeCC----CccEEEeCCCCCCCE
Confidence 4455665444 55555688999999998 457889999999999998877887654332 345788999999999
Q ss_pred EEEEEEEecCCCCCCCCceEEEeec
Q psy14886 461 YEVKVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 461 Y~~~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
|.|+|+|+|.+|.|++|.. .+.|.
T Consensus 75 Y~~~V~A~n~~G~g~~s~~-~~~T~ 98 (107)
T 2dn7_A 75 YIFRLAAKNRAGLGEEFEK-EIRTP 98 (107)
T ss_dssp EEEEEEEEETTEEEEEEEE-EEECC
T ss_pred EEEEEEEEcCCcccCCeee-EEeCC
Confidence 9999999999999999984 45554
No 460
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=8.8e-15 Score=111.74 Aligned_cols=100 Identities=22% Similarity=0.260 Sum_probs=79.6
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccc
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 457 (505)
.+.|.++.| .+|.++.+...+.++|.|.|+++. .. |.|++|+|+|+..+...|....... ...+.+.|.+|.|
T Consensus 10 ~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~--~~-g~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~i~~L~p 82 (118)
T 2yrz_A 10 DSRLTAGVP-DTPTRLVFSALGPTSLRVSWQEPR--CE-RPLQGYSVEYQLLNGGELHRLNIPN---PAQTSVVVEDLLP 82 (118)
T ss_dssp TTSSSCSCC-CCCCCCEECCCBTTEEEEECCCCC--CS-SCEEEEEEEEEBSSSCCEEEEEESC---TTCCEEEEESCCT
T ss_pred eeecCCCCC-CCCCceEEEeCCCCEEEEEeCCCC--CC-CCccEEEEEEEECCCCceEEEEcCC---CCcCEEEeCCCCC
Confidence 566766666 588899998889999999999842 32 6899999999998877776554432 2346788999999
Q ss_pred eeeEEEEEEEecCCCCCCCCc-eEEEee
Q psy14886 458 YTEYEVKVQAINDVGPGPESE-VVTIWH 484 (505)
Q Consensus 458 ~~~Y~~~v~a~n~~G~g~~s~-~~~~~t 484 (505)
++.|.|+|+|+|.+|.|++|+ .+...+
T Consensus 83 ~t~Y~~~V~A~n~~G~g~~S~~~~~~~t 110 (118)
T 2yrz_A 83 NHSYVFRVRAQSQEGWGREREGVITIES 110 (118)
T ss_dssp TCEEEEEEEEEESSCEEEEEEEEEECCC
T ss_pred CCEEEEEEEEEcCCcCCCCcCCceEeCC
Confidence 999999999999999999998 444444
No 461
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.56 E-value=2.3e-14 Score=126.56 Aligned_cols=167 Identities=17% Similarity=0.255 Sum_probs=109.7
Q ss_pred ceEEeeCCCeEEEEeecCCCC------CCeEEEEEC--CEE---ec---------CCCcEEEeeC---CCEEEcCCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP------KPKFVWKKD--GNI---IG---------SGGRRKIFEN---GNLLISPVSRDD 153 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p------~~~i~W~~~--g~~---~~---------~~~~~~~~~~---~~l~i~~v~~~d 153 (505)
..+.+.+|++++|.|.+.+.+ .+.+.|+++ +.. +. ...++..... .+|.|.+++.+|
T Consensus 13 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 92 (264)
T 2gjj_A 13 SSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAED 92 (264)
T ss_dssp SEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHH
Confidence 456789999999999998887 579999984 321 10 1245544332 269999999999
Q ss_pred CEEEEEEEEcCCCce-eeeEEEEEEeCC------------------eeeeeCCCceEEEeeccEEEEEEeeecCCCCeEE
Q psy14886 154 SGIYSCTATNVHGMD-ESKGRLIVLHGP------------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 214 (505)
Q Consensus 154 ~G~y~C~~~~~~g~~-~~~~~l~v~~~p------------------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~ 214 (505)
+|.|.|.+.+..+.. ...+.|.|..+| .+....+....+..|+.++|.|.+.+.+.....+
T Consensus 93 sG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 172 (264)
T 2gjj_A 93 LAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGYFI 172 (264)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSEE
T ss_pred CEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCeEE
Confidence 999999999875432 233577776553 2222223345688999999999998876423467
Q ss_pred EEEeCC--EE---ec---CCCC------CcccCCeeee----cCCeEEEecCCCCCCEEEEEEEEec
Q psy14886 215 IWTHNG--VR---IG---NMDL------NELETPNINI----DGGLLEITNASFADAGEYECVVKST 263 (505)
Q Consensus 215 ~w~~~~--~~---~~---~~~~------~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~n~ 263 (505)
.|+++. .. +. .... .......... ....|.|.++..+|+|.|.|.+.|.
T Consensus 173 ~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 173 NWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 898752 11 10 0000 0000011111 1347999999999999999999985
No 462
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.56 E-value=1.5e-14 Score=121.79 Aligned_cols=183 Identities=15% Similarity=0.116 Sum_probs=104.9
Q ss_pred CCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCCeEEee--eccccceeeeecCceeeEEee-eccCCceeE
Q psy14886 282 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS--EHVIGKEVDRYTGRKEASIEN-VLVPWSTYE 358 (505)
Q Consensus 282 p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~-~L~~~~~y~ 358 (505)
|.++.+.......+ |+|+++....+....|.|+|+..+...|.... ..++ ....-+.. .+.++..|.
T Consensus 11 P~nv~~~s~n~~~i-L~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~---------~~~Cdlt~~~~~~~~~Y~ 80 (211)
T 3g9v_A 11 PQRVQFQSRNFHNI-LQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQ---------ELSCDLTSETSDIQEPYY 80 (211)
T ss_dssp CEEEEEEEETTEEE-EEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEEC---------CSEEECTGGGCSTTSCEE
T ss_pred CceeEEEEEcCceE-EEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCC---------CCEECCCCcccccCccEE
Confidence 78888877666665 99999876554467899999988778898642 1221 11222221 146788999
Q ss_pred EEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCcc--ccCCC--------CceEEEEEEE
Q psy14886 359 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE--KQNAP--------NIYYKIFWRK 428 (505)
Q Consensus 359 ~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~--~~~~~--------i~~Y~v~~~~ 428 (505)
+||+|.+..|.+.++... .+.+......+||. +.+... .++|.|.|++|... +.+|. ...|+|.|.+
T Consensus 81 ~RV~A~~~~~~S~ws~~~-~f~~~~~t~i~PP~-v~v~~~-~~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~ 157 (211)
T 3g9v_A 81 GRVRAASAGSYSEWSMTP-RFTPWWETKIDPPV-MNITQV-NGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIIN 157 (211)
T ss_dssp EEEEEEETTEECCCEECC-CBCHHHHCBCCCCE-EECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC-
T ss_pred EEEEEECCCCcCCCEecC-cccccccCccCCCE-EEEEEc-CCEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEE
Confidence 999999998888776443 44443344557785 777644 46999999995432 13443 4779999988
Q ss_pred cCCCCcEEEEeeecCceeeEEEEcCCccceeeEEEEEEEecC--CCCCCCCceEEE
Q psy14886 429 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND--VGPGPESEVVTI 482 (505)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v~a~n~--~G~g~~s~~~~~ 482 (505)
.+...-. ..... ....+.|.+|.|++.|.|+|+|+.. ...|++|++...
T Consensus 158 ~~~~~~~-~~~~~----~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~~~C~ 208 (211)
T 3g9v_A 158 NSLEKEQ-KVYEG----AHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEERCV 208 (211)
T ss_dssp -----CE-EEEEE----SSCCCC----------CEEEEEEETTTTEECCCCCC---
T ss_pred CCCccEE-EEEec----CCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCCCEeE
Confidence 7633311 11111 2356789999999999999999954 345788876543
No 463
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.56 E-value=5.5e-14 Score=120.78 Aligned_cols=167 Identities=14% Similarity=0.223 Sum_probs=107.5
Q ss_pred eEEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEE---e---c-------------CCCcEEEeeCC-----CEEEcCC
Q psy14886 98 ETYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---I---G-------------SGGRRKIFENG-----NLLISPV 149 (505)
Q Consensus 98 ~~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~---~---~-------------~~~~~~~~~~~-----~l~i~~v 149 (505)
.+.+.+|++++|.|.+.+.+ ...+.|++. +.. + . ...++.+..+. +|.|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (221)
T 3m8o_H 9 GGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSL 88 (221)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSC
T ss_pred CEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCC
Confidence 35688999999999987643 569999973 211 1 0 12455544332 4999999
Q ss_pred CCCCCEEEEEEEEcCC--CceeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCC-CeEEEEEeCCEE
Q psy14886 150 SRDDSGIYSCTATNVH--GMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELL-DVAYIWTHNGVR 222 (505)
Q Consensus 150 ~~~d~G~y~C~~~~~~--g~~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~~~w~~~~~~ 222 (505)
+.+|+|.|.|.+.+.. ........|.|.. .|.+....+... ..|+.++|.|.+.+..+. .+.+.|.+++..
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~ 166 (221)
T 3m8o_H 89 KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSESGQG 166 (221)
T ss_dssp CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCSTT
T ss_pred CHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEECCEE
Confidence 9999999999999864 2223335676652 222221222222 678899999999984333 468889998765
Q ss_pred ecCCCCCc---ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcE
Q psy14886 223 IGNMDLNE---LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 267 (505)
Q Consensus 223 ~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~ 267 (505)
+....... .....+ ...+.|.|......|.|.|+|.|.|..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~-~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 167 VTARNFPPSQDASGDLY-TTSSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CEEEECCCEECSSSSCE-EEEEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred CceEEcCceeeCCCCcE-EEEEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 52111000 001111 122368888888889999999999987653
No 464
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.56 E-value=2.3e-14 Score=142.32 Aligned_cols=168 Identities=18% Similarity=0.261 Sum_probs=118.3
Q ss_pred ceEEeeCCCeEEEEeec-CCCCCCeEEEEECCEEec------------CCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEc
Q psy14886 97 SETYAGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIG------------SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 163 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~-~~~p~~~i~W~~~g~~~~------------~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~ 163 (505)
....+.+|++++|.|.+ .+.|.+.+.|++++..+. -..+..+..+++|.|.+++.+|+|.|+|.+.+
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEEC
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEc
Confidence 45678999999999999 778888999999765221 02345566677899999999999999999999
Q ss_pred CCCce-eeeEEEEEEeCCeeeeeCCCceEEEeecc-EEEEEEeeec-CCCCeEEEEEeCCEEecCCCCCccc--------
Q psy14886 164 VHGMD-ESKGRLIVLHGPSYYEQLPPKITIAAHRN-LQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELE-------- 232 (505)
Q Consensus 164 ~~g~~-~~~~~l~v~~~p~~~~~~~~~~~~~~g~~-~~l~C~~~~~-~~~~~~~~w~~~~~~~~~~~~~~~~-------- 232 (505)
..+.. ...+.|.|..+|...........+..+.. +.|.|.+.+. |.+ .+.|+++|..+.........
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~--~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 531 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAG--TLSWHLDGKPLVPNEKGVSVKEQTRRHP 531 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCC--EEEEEETTEECCTTSTTEEEEEEEEECT
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCC--eEEEEECCEECCCCCCeEEEEeeeEEcC
Confidence 98887 66688888775543332233333555554 4669999885 654 67799999988653211100
Q ss_pred CCeeeecCCeEEEecCC-CCCCEEEEEEEEecCCc
Q psy14886 233 TPNINIDGGLLEITNAS-FADAGEYECVVKSTVGK 266 (505)
Q Consensus 233 ~~~~~~~~~~l~i~~~~-~~~~g~y~C~~~n~~g~ 266 (505)
........+.|.|..+. .++.+.|+|.|.|..+.
T Consensus 532 ~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 532 ETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp TTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 01111123568888887 55688999999998654
No 465
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=1.1e-14 Score=109.32 Aligned_cols=95 Identities=21% Similarity=0.152 Sum_probs=74.4
Q ss_pred CCCCCceeeeeccccccEEEEEEeCCccccCC-CCceEEEEEEEcCC-CCcEEEEeeecCceeeEEEEcCCccceeeEEE
Q psy14886 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA-PNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463 (505)
Q Consensus 386 p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~-~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~ 463 (505)
++.+|..+.+...+.++|.|.|++ +.+.++ +|++|.|+|+..+. ..|..... . ..+.+.+.+|.|++.|.|
T Consensus 7 ~P~~P~~p~~~~~~~~sv~l~W~~--p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~----~~~~~~v~~L~p~t~Y~f 79 (109)
T 1x5x_A 7 GPSMPASPVLTKAGITWLSLQWSK--PSGTPSDEGISYILEMEEETSGYGFKPKYD-G----EDLAYTVKNLRRSTKYKF 79 (109)
T ss_dssp CCCCCCCCEEEEECSSEEEEECCC--CSSCCSSSSCEEEEEECCSSSSCCCEEEEE-E----SCSEEEEESCCSSCEEEE
T ss_pred CCcCCCCCEEEEccCCEEEEEEcC--CCCCCCCcccEEEEEEecCCCCcceEEeEe-C----CccEEEECCCCCCCEEEE
Confidence 445566666777788999999998 344455 89999999998774 35553321 1 235788999999999999
Q ss_pred EEEEecCCCCCCCCceEEEeecce
Q psy14886 464 KVQAINDVGPGPESEVVTIWHDPL 487 (505)
Q Consensus 464 ~v~a~n~~G~g~~s~~~~~~t~p~ 487 (505)
||.|+|.+|.|++|+.+.+.|.+.
T Consensus 80 rV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 80 KVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEeCCCCcCCccCEEeEeCCC
Confidence 999999999999999999888653
No 466
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.55 E-value=1.8e-14 Score=105.75 Aligned_cols=79 Identities=22% Similarity=0.419 Sum_probs=67.2
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
|.+|++++|.|.+.|.|.+.++|+|||.+|... ...++.+. ..+|.|.+++ .+|+|.|+|.|.|..|...
T Consensus 17 v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~-----~~~~~~~~~~~~~~~L~I~~~~-~~D~G~Y~C~a~N~~G~~~ 90 (100)
T 3knb_A 17 IDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQ-----EQGRFHIENTDDLTTLIIMDVQ-KQDGGLYTLSLGNEFGSDS 90 (100)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEECCTT-----GGGTEEEEECSSEEEEEESSCC-GGGCEEEEEEEEETTEEEE
T ss_pred EeCCCeEEEEEEEEEecCCEEEEEECceEeeee-----ccceeeeecccceEEEEEcCCC-ccCCEEEEEEEEECCCEEE
Confidence 468999999999999999999999999998743 23455542 2479999999 9999999999999999988
Q ss_pred eeEEEEEEe
Q psy14886 77 SSAQLRVLT 85 (505)
Q Consensus 77 ~~~~l~v~~ 85 (505)
..+.|.|..
T Consensus 91 ~~~~l~V~~ 99 (100)
T 3knb_A 91 ATVNIHIRS 99 (100)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEE
Confidence 888888864
No 467
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.55 E-value=5e-14 Score=124.03 Aligned_cols=168 Identities=15% Similarity=0.206 Sum_probs=109.4
Q ss_pred ceEEeeCCCeEEEEeecCCC--CCCeEEEEEC--CEE---e--------------cCCCcEEEeeCC-----CEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAA--PKPKFVWKKD--GNI---I--------------GSGGRRKIFENG-----NLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~--p~~~i~W~~~--g~~---~--------------~~~~~~~~~~~~-----~l~i~~v~ 150 (505)
..+.+.+|++++|.|.+.+. +.+.+.|++. +.. + ....++.+..+. +|.|.+++
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 93 (256)
T 3juy_B 14 GAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLR 93 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCC
Confidence 55779999999999998774 5679999973 211 1 012355554322 49999999
Q ss_pred CCCCEEEEEEEEcC------------CCceeeeEEEEEEeC--------------CeeeeeCCCceEEEeeccEEEEEEe
Q psy14886 151 RDDSGIYSCTATNV------------HGMDESKGRLIVLHG--------------PSYYEQLPPKITIAAHRNLQLRCSA 204 (505)
Q Consensus 151 ~~d~G~y~C~~~~~------------~g~~~~~~~l~v~~~--------------p~~~~~~~~~~~~~~g~~~~l~C~~ 204 (505)
.+|+|.|.|.+.+. .+.......|.|... +..+...+....+..|+.++|.|.+
T Consensus 94 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~ 173 (256)
T 3juy_B 94 SADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCRS 173 (256)
T ss_dssp GGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEEE
T ss_pred cccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEEE
Confidence 99999999999986 223333466777653 2233444667788899999999999
Q ss_pred eecCCCCeEEEEEeC--CEEec---CCCCC----cccCCee--eecCCeEEEecCCCCCCEEEEEEEEecCC
Q psy14886 205 HTEELLDVAYIWTHN--GVRIG---NMDLN----ELETPNI--NIDGGLLEITNASFADAGEYECVVKSTVG 265 (505)
Q Consensus 205 ~~~~~~~~~~~w~~~--~~~~~---~~~~~----~~~~~~~--~~~~~~l~i~~~~~~~~g~y~C~~~n~~g 265 (505)
.+.+. ...+.|++. +.... ..... ....... ......|.|.++..+|+|.|.|.|.|..+
T Consensus 174 ~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 174 SHSIR-SRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp SSCCT-TCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCCcC-CeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 88654 235668762 22111 00000 0000111 11223699999999999999999988544
No 468
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.55 E-value=2.3e-14 Score=105.19 Aligned_cols=89 Identities=27% Similarity=0.469 Sum_probs=74.0
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCC--cEEEeeCC---CEEEcCCCCCCCEEEEEEE
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENG---NLLISPVSRDDSGIYSCTA 161 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~--~~~~~~~~---~l~i~~v~~~d~G~y~C~~ 161 (505)
||.|...+ .+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+.... ++.+...+ +|.|.++..+|+|.|+|.|
T Consensus 5 PP~i~~~p--~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 3knb_A 5 PPKIEALP--SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEEECCCC--SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEeCC--CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEE
Confidence 56665544 56789999999999999999999999999999986543 44444333 5999999999999999999
Q ss_pred EcCCCceeeeEEEEEE
Q psy14886 162 TNVHGMDESKGRLIVL 177 (505)
Q Consensus 162 ~~~~g~~~~~~~l~v~ 177 (505)
.|..|.....+.|.|.
T Consensus 83 ~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 83 GNEFGSDSATVNIHIR 98 (100)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EECCCEEEEEEEEEEE
Confidence 9999998888888874
No 469
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.55 E-value=6.2e-14 Score=125.09 Aligned_cols=170 Identities=17% Similarity=0.195 Sum_probs=108.8
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC--EE---e-----------c---CCCcEEEeeC----CCEEEcCCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---I-----------G---SGGRRKIFEN----GNLLISPVSRDD 153 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~~---~-----------~---~~~~~~~~~~----~~l~i~~v~~~d 153 (505)
..+.+.+|++++|.|.+.+.+.+.+.|++++ .. + . ...++.+..+ .+|.|.+++.+|
T Consensus 32 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D 111 (279)
T 2wbj_D 32 SWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPED 111 (279)
T ss_dssp SEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGG
T ss_pred CeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccC
Confidence 4567899999999999988888899999853 11 1 0 1235554432 269999999999
Q ss_pred CEEEEEEEEcCCC----c--eeeeEEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCE
Q psy14886 154 SGIYSCTATNVHG----M--DESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 221 (505)
Q Consensus 154 ~G~y~C~~~~~~g----~--~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~ 221 (505)
+|.|+|.+.+..+ . ....+.|.|.. +|.+....+....+..|+.+.|.|.+.+.+++.+.+.|++++.
T Consensus 112 ~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~ 191 (279)
T 2wbj_D 112 SSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGK 191 (279)
T ss_dssp CEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTE
T ss_pred CEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECCE
Confidence 9999999998432 1 12235677764 2222222222222336889999999998755457888999998
Q ss_pred EecCCCCCc--------ccCCeeeecCCeEEEecCCCC-CCEEEEEEEEecCCc
Q psy14886 222 RIGNMDLNE--------LETPNINIDGGLLEITNASFA-DAGEYECVVKSTVGK 266 (505)
Q Consensus 222 ~~~~~~~~~--------~~~~~~~~~~~~l~i~~~~~~-~~g~y~C~~~n~~g~ 266 (505)
.+....... ..........+.|.|...... +.+.|+|.|.|....
T Consensus 192 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 192 EVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp ECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred ECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 875432100 000011111234666666554 478899999997654
No 470
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.54 E-value=3.1e-15 Score=129.65 Aligned_cols=161 Identities=17% Similarity=0.233 Sum_probs=102.2
Q ss_pred eeCCCeEEEEeecCCC---CCC-eEEEEECCEEecCCCc--EEE------eeCCCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 101 AGEGGNVTIFCNPEAA---PKP-KFVWKKDGNIIGSGGR--RKI------FENGNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 101 v~~g~~v~l~C~~~~~---p~~-~i~W~~~g~~~~~~~~--~~~------~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
+.+|++++|.|.+.+. |.+ .|.|++++..+..... ... .....|.|.+++.+|+|.|+|.+.+..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 5689999999999876 665 9999998866542110 001 112358999999999999999999987754
Q ss_pred eeeEEE----EEEeCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCC---
Q psy14886 169 ESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG--- 241 (505)
Q Consensus 169 ~~~~~l----~v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~--- 241 (505)
.....+ .+..+|.+....+... ...|+.+.|.|.+.+.+++.+.+.|+++|..+..... .......++
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~----~~~~~~~dgt~~ 183 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKE-EMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKN----TPPTMDTDGSYF 183 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEE----CCCEECTTSCEE
T ss_pred CcEEEEecCCCCCcCCEEEEECCChH-HhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCcee----cCceECCCCCEE
Confidence 222222 2223444333322221 1246789999999986655678899999988743210 000111222
Q ss_pred ---eEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 242 ---LLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 242 ---~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.|.+.....++.|.|+|.|.|....
T Consensus 184 ~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 184 LYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 2344443345689999999997654
No 471
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.54 E-value=3.1e-14 Score=105.85 Aligned_cols=94 Identities=17% Similarity=0.267 Sum_probs=73.9
Q ss_pred CCCCCCCCCCceeeeeccccccEEEEE--EeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccce
Q psy14886 381 TPADKPYQAPSRIGGGGGKIGDLSISW--EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 458 (505)
Q Consensus 381 t~~~~p~~~P~~~~~~~~~~~~v~l~W--~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 458 (505)
|....| .+|.++++...+.++|.|.| .+ +...+|. ++|.|+|+... ..+..... . . .+.|.+|.|+
T Consensus 5 T~~~~P-~~p~~l~~~~~~~~sv~l~W~~~~--P~~~ng~-~~Y~v~y~~~~-~~~~~~~~---~--~--~~~i~~L~p~ 72 (107)
T 1x5a_A 5 SSGAES-LSGLSLKLVKKEPRQLELTWAGSR--PRNPGGN-LSYELHVLNQD-EEWHQMVL---E--P--RVLLTKLQPD 72 (107)
T ss_dssp TTTCCC-CCSCCCCEEEEETTEEEEECCCCC--SSCCSSC-CEEEEEEECSS-CEEEEEES---S--S--EEEEESCCSS
T ss_pred CCCCCC-CCCCceEEEecCCCEEEEEECCCC--CCCCCCc-eEEEEEEEeCC-CCceEEEe---c--c--eEEECCCCCC
Confidence 444444 56779999889999999999 65 5677888 99999998862 22211111 1 1 1899999999
Q ss_pred eeEEEEEEEecCCCCCCCCceEEEeecc
Q psy14886 459 TEYEVKVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 459 ~~Y~~~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
+.|.|+|+|.|.+|.|++|+.+.+.|.+
T Consensus 73 t~Y~f~V~A~~~~G~g~~S~~~~~~T~~ 100 (107)
T 1x5a_A 73 TTYIVRVRTLTPLGPGPFSPDHEFRTSP 100 (107)
T ss_dssp CEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred CEEEEEEEEECCCccCCCCCCEEEEECC
Confidence 9999999999999999999999998864
No 472
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=4.6e-14 Score=106.84 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=74.2
Q ss_pred CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccc
Q psy14886 378 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 457 (505)
Q Consensus 378 ~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p 457 (505)
...+.+..+|.+|.++++...+ ++|.|.|++ +.+.+|.|++|+|+|+.... .+...... ...+.+.|.+|.|
T Consensus 9 ~~~t~e~~~P~~P~~l~~~~~~-~sv~l~W~~--P~~~ng~i~gY~i~y~~~~~-~~~~~~~~----~~~~~~~l~~L~p 80 (116)
T 2edb_A 9 ENDLDESQVPDQPSSLHVRPQT-NCIIMSWTP--PLNPNIVVRGYIIGYGVGSP-YAETVRVD----SKQRYYSIERLES 80 (116)
T ss_dssp SSSCBCSSCCCCCSCEEEEECS-SCEEEEECC--CSCTTBCCCEEEEEEEESST-TSEEEEEE----TTCCEEEECSCCS
T ss_pred cccCCCCCCCCCCCCeEEEECC-CEEEEEEcC--CCCCCCceeEEEEEEEeCCC-CeEEEEeC----CCeeEEEeCCCCC
Confidence 4445553455699999998887 999999998 45568999999999997442 22222222 1346789999999
Q ss_pred eeeEEEEEEEecCCCCCCCCceEEEeec
Q psy14886 458 YTEYEVKVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 458 ~~~Y~~~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
++.|.|+|+|+|.+|.|+++.. .+.|.
T Consensus 81 ~t~Y~~~V~A~n~~G~g~~~~~-~~~T~ 107 (116)
T 2edb_A 81 SSHYVISLKAFNNAGEGVPLYE-SATTR 107 (116)
T ss_dssp SSBEEEEEEEEETTEECSCEEE-CCBCC
T ss_pred CCEEEEEEEEEeCCccCCCCcc-eeecc
Confidence 9999999999999999997753 34443
No 473
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.54 E-value=7.6e-14 Score=122.56 Aligned_cols=167 Identities=16% Similarity=0.189 Sum_probs=105.5
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEE---e-c--C---------CC-cEEEeeCCC--EEEcCCCCCCCEE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNI---I-G--S---------GG-RRKIFENGN--LLISPVSRDDSGI 156 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~---~-~--~---------~~-~~~~~~~~~--l~i~~v~~~d~G~ 156 (505)
..+.+.+|++++|.|.+.+.+.+.+.|++. +.. + . . .. ++....+.. |.|.+++.+|+|.
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG~ 88 (253)
T 3to4_D 9 RWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGRT 88 (253)
T ss_dssp SEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCEE
T ss_pred CeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCeE
Confidence 456789999999999988888889999982 211 1 0 0 11 444433332 9999999999999
Q ss_pred EEEEEEcCCC------ceeeeEEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEec
Q psy14886 157 YSCTATNVHG------MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 224 (505)
Q Consensus 157 y~C~~~~~~g------~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~ 224 (505)
|.|.+.+..+ .......|.|.. +|.+....+....+..|..++|.|.+.+..++.+.+.|.++|..+.
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~ 168 (253)
T 3to4_D 89 LYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 168 (253)
T ss_dssp EEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEECC
Confidence 9999987643 112224666653 2222222122222224678999999999655557889999999886
Q ss_pred CCCCCcc---------cCCeeeecCCeEEEecCCCCC-CEEEEEEEEecC
Q psy14886 225 NMDLNEL---------ETPNINIDGGLLEITNASFAD-AGEYECVVKSTV 264 (505)
Q Consensus 225 ~~~~~~~---------~~~~~~~~~~~l~i~~~~~~~-~g~y~C~~~n~~ 264 (505)
....... ....+ ...+.|.+.....++ .+.|+|.|.|..
T Consensus 169 ~~~~~~~~~~~~~~~~~~g~~-~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 169 SGVSTDPQPLKEQPALNDSRY-ALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp TTEEECSSCEESSTTCTTCCE-EEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CceecccccccccccCCCCCE-EEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 5321100 01111 112356666665555 789999998864
No 474
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.54 E-value=3.6e-14 Score=109.83 Aligned_cols=97 Identities=18% Similarity=0.227 Sum_probs=77.0
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcC--CCCcEEEEeeecCceeeEEEEcCCccceee
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIPSEFYYTE 460 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 460 (505)
...+|.+|.++.+...+.+++.|.|++ +.+.+++|++|.|+|+..+ ...|....... .+.. . .+.+|.|++.
T Consensus 13 v~~~P~~P~~~~~~~~~~~sv~l~W~p--~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~-~~~~--~-~i~~L~p~t~ 86 (127)
T 1uey_A 13 VYDVPNPPFDLELTDQLDKSVQLSWTP--GDDNNSPITKFIIEYEDAMHKPGLWHHQTEVS-GTQT--T-AQLNLSPYVN 86 (127)
T ss_dssp CCCSCCCCEEEEEECCSSSCEEEEEEC--CCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEE-SSCC--E-EEECCCTTCE
T ss_pred eecCCcCCCCcEEEEccCCEEEEEEEC--CCCCCCCceEEEEEEEECCCCCCccEEEeeeC-CCce--E-EEecCCCCCE
Confidence 345667999999998899999999997 5778899999999999865 46687544332 2222 2 3569999999
Q ss_pred EEEEEEEecCCCCCCCCceE-EEeec
Q psy14886 461 YEVKVQAINDVGPGPESEVV-TIWHD 485 (505)
Q Consensus 461 Y~~~v~a~n~~G~g~~s~~~-~~~t~ 485 (505)
|.|||+|+|.+|.|++|+.. .+.|.
T Consensus 87 Y~frV~A~n~~G~s~~S~~~~~~~T~ 112 (127)
T 1uey_A 87 YSFRVMAVNSIGKSLPSEASEQYLTK 112 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECC
T ss_pred EEEEEEEEeCCccCCccccccceEcC
Confidence 99999999999999999985 56664
No 475
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.54 E-value=1.6e-15 Score=130.89 Aligned_cols=198 Identities=16% Similarity=0.187 Sum_probs=100.1
Q ss_pred eEEEEEEEcccCceEeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCCC----CCeEEEEECCEEecCCCc--
Q psy14886 62 AMYQCRAKNQLKTRYSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAAP----KPKFVWKKDGNIIGSGGR-- 135 (505)
Q Consensus 62 G~Y~C~~~~~~~~~~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p----~~~i~W~~~g~~~~~~~~-- 135 (505)
|.|.|.+.+..+. .... .+.. +|.+.+.+......+..|+.++|.|.+.|.. ...|+|+++|..+.....
T Consensus 1 ~~~~~~~~~~~~~--c~~~-~~~~-~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~ 76 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAP-ELLG-GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKP 76 (240)
T ss_dssp --------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECC
T ss_pred CceeeeeeecCCC--CCcc-ccCC-CCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceecc
Confidence 6799988876553 1111 1111 2322222211111144699999999998864 348999999998743211
Q ss_pred EEEeeC------CCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE----EEeCCeeeeeCCCceEEEeeccEEEEEEee
Q psy14886 136 RKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI----VLHGPSYYEQLPPKITIAAHRNLQLRCSAH 205 (505)
Q Consensus 136 ~~~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~----v~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 205 (505)
.....+ ..|.|.....+|.|.|+|.|.+..+.......+. +..+|.+....+.... ..|..+.|.|.+.
T Consensus 77 ~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~-~~g~~~~L~C~~~ 155 (240)
T 4acp_A 77 REEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDE-LTKNQVSLTCLVK 155 (240)
T ss_dssp CEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEE
T ss_pred ceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHH-hcCCceEEEEEEe
Confidence 011112 2466766666789999999999876432222221 2234444433322221 2378899999999
Q ss_pred ecCCCCeEEEEEeCCEEecCCCCCc---ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCC
Q psy14886 206 TEELLDVAYIWTHNGVRIGNMDLNE---LETPNINIDGGLLEITNASFADAGEYECVVKSTVG 265 (505)
Q Consensus 206 ~~~~~~~~~~w~~~~~~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g 265 (505)
+..++.+.+.|.++|..+....... ..... ....+.|.+......+.+.|+|.|.+..-
T Consensus 156 gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt-~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 156 GFYPSDIAVEWESNGQPENNYKATPPVLDSDGS-FFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEBSSCCEEEEEETTEECSSEEECCCEECTTSC-EEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEeCCCcEEEEEECCEECCCcCccCceECCCCC-EEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 9655567899999998864311000 00011 11123455554444568999999998654
No 476
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.54 E-value=3.2e-15 Score=129.16 Aligned_cols=164 Identities=10% Similarity=0.088 Sum_probs=105.5
Q ss_pred EeeCCCeEEEEeecCCC-CC-C-eEEEEECCEEe-cCCCcEE-EeeCC------CEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 100 YAGEGGNVTIFCNPEAA-PK-P-KFVWKKDGNII-GSGGRRK-IFENG------NLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~-p~-~-~i~W~~~g~~~-~~~~~~~-~~~~~------~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
.+.+|+.++|.|.+.+. |. + .+.|+++|..+ ....... ...++ .|.|.++..+|+|.|+|.+.+..+..
T Consensus 24 ~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 103 (231)
T 2w59_A 24 ELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELPL 103 (231)
T ss_dssp HHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCCC
Confidence 36789999999999884 63 4 99999998876 3222111 11222 48899999999999999999877543
Q ss_pred eeeEEEEEE------eCCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcc---c-------
Q psy14886 169 ESKGRLIVL------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL---E------- 232 (505)
Q Consensus 169 ~~~~~l~v~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~---~------- 232 (505)
...+.|. .+|.+....+.... ..+..+.|.|.+.+.+++.+.+.|+++|..+........ .
T Consensus 104 --~~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~ 180 (231)
T 2w59_A 104 --PLSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANG 180 (231)
T ss_dssp --CEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC
T ss_pred --ceEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccc
Confidence 2333332 23333222222221 124469999999997655678899999998865321100 0
Q ss_pred --CC-eeeecCCeEEEecCCCCCCEEEEEEEEecCCc
Q psy14886 233 --TP-NINIDGGLLEITNASFADAGEYECVVKSTVGK 266 (505)
Q Consensus 233 --~~-~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~ 266 (505)
.. ......+.|.|.....++.|.|+|.|.|....
T Consensus 181 ~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 181 AGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp ---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred cCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 00 01111235667766677899999999997654
No 477
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.53 E-value=2.3e-13 Score=117.86 Aligned_cols=205 Identities=16% Similarity=0.153 Sum_probs=128.4
Q ss_pred eccEEEEEEeeecCCCCeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE--EE
Q psy14886 195 HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK--TT 272 (505)
Q Consensus 195 g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~--~~ 272 (505)
...+.|.|.........+.+.|...+.... ...........+.+.++.....+.|++.|.|..|....+ +.
T Consensus 19 ~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~-------~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~ 91 (234)
T 3f7q_A 19 SRKIHFNWLPPSGKPMGYRVKYWIQGDSES-------EAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVS 91 (234)
T ss_dssp SSCEEEEEECCSSCCCEEEEEEEETTSCGG-------GCEEEEESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEE
T ss_pred CCEEEEEEECCCCccceEEEEEEECCCCcc-------ceEEEcCCccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEE
Confidence 346777777653333345555654432111 112233456678899999888888999999987764332 22
Q ss_pred EEE-cCCCCCCCceEEEEEeCCeEEEEeecCCCCCCCCceEEEEEEeCCCCC-----eEEeeeccccceeeeecCceeeE
Q psy14886 273 VIV-EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST-----WFNVSEHVIGKEVDRYTGRKEAS 346 (505)
Q Consensus 273 l~v-~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~~~i~~y~v~~~~~~~~~-----w~~~~~~~~~~~~~~~~~~~~~~ 346 (505)
+.. ...|.+|.++.+.....+++.|+|.+|...++.+.+|.|+|+...... |....... .....+.
T Consensus 92 ~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 163 (234)
T 3f7q_A 92 CRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDN--------PKNRMLL 163 (234)
T ss_dssp EECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSC--------TTCCEEE
T ss_pred EEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceEEEecC--------CcceEEE
Confidence 222 345777888999989999999999998877789999999998765432 22221110 0123445
Q ss_pred EeeeccCCceeEEEEEEEcCCCcCCCCCCCCCccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEE
Q psy14886 347 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 426 (505)
Q Consensus 347 ~~~~L~~~~~y~~~v~a~n~~G~~~~s~~~~~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~ 426 (505)
+.+ |.+++.|.|+|+|.|..|.|++|.....+.|.+..|+.+|....+.. + ....+..+.+|.+++
T Consensus 164 i~~-L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~~P~~~~~~i-------~------~~~~g~~~~~~~~~~ 229 (234)
T 3f7q_A 164 IEN-LRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIPI-------V------DAQSGEDYDSFLMYS 229 (234)
T ss_dssp EEC-CCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCCCCCCTTCCE-------E------ETTC-----------
T ss_pred eCC-CCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCCCccccceee-------E------EcccCcchheeeeeh
Confidence 555 99999999999999999999988754478888888888876544421 1 124455677888877
Q ss_pred EE
Q psy14886 427 RK 428 (505)
Q Consensus 427 ~~ 428 (505)
+.
T Consensus 230 ~~ 231 (234)
T 3f7q_A 230 DD 231 (234)
T ss_dssp --
T ss_pred hh
Confidence 64
No 478
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.53 E-value=3.1e-14 Score=126.94 Aligned_cols=183 Identities=15% Similarity=0.233 Sum_probs=110.1
Q ss_pred ceEEeeCCCeEEEEeecCCC--CCCeEEEEECC--EEec-----------------CCCcEEEeeCC-----CEEEcCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAA--PKPKFVWKKDG--NIIG-----------------SGGRRKIFENG-----NLLISPVS 150 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~--p~~~i~W~~~g--~~~~-----------------~~~~~~~~~~~-----~l~i~~v~ 150 (505)
..+.+.+|++++|.|.+.+. +.+.+.|++.. .... ...++.+..+. +|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (280)
T 3fku_X 8 GAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLR 87 (280)
T ss_dssp CCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCC
T ss_pred CCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 44668899999999998775 45799998732 1110 01344444222 59999999
Q ss_pred CCCCEEEEEEEEcC---------CCceeeeEEEEEEe--------------CCeeeeeCCCceEEEeeccEEEEEEeeec
Q psy14886 151 RDDSGIYSCTATNV---------HGMDESKGRLIVLH--------------GPSYYEQLPPKITIAAHRNLQLRCSAHTE 207 (505)
Q Consensus 151 ~~d~G~y~C~~~~~---------~g~~~~~~~l~v~~--------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~ 207 (505)
.+|+|.|.|.+.+. .........|.|.. .+..+...+. ..+..|+.++|.|.+.+.
T Consensus 88 ~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~~ 166 (280)
T 3fku_X 88 SEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNSN 166 (280)
T ss_dssp STTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCCC
T ss_pred hhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecCC
Confidence 99999999999886 11122335677655 1222333333 778899999999999884
Q ss_pred CCCCeEEEEEeC--CEEec---CCC--CC--cccCCeeee--cCCeEEEecCCCCCCEEEEEEEEecCCc---EEEEEEE
Q psy14886 208 ELLDVAYIWTHN--GVRIG---NMD--LN--ELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGK---ISTKTTV 273 (505)
Q Consensus 208 ~~~~~~~~w~~~--~~~~~---~~~--~~--~~~~~~~~~--~~~~l~i~~~~~~~~g~y~C~~~n~~g~---~~~~~~l 273 (505)
..+...+.|++. +..+. ... .. ......... ....|.|.+++.+|+|.|.|.+.+..+. ......|
T Consensus 167 ~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t~l 246 (280)
T 3fku_X 167 NVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGTKL 246 (280)
T ss_dssp CCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCCEE
T ss_pred CCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCEEE
Confidence 322235568762 22111 000 00 000011111 1235999999999999999999987632 2233466
Q ss_pred EEcCCCC
Q psy14886 274 IVEGPPG 280 (505)
Q Consensus 274 ~v~~~p~ 280 (505)
.|...|.
T Consensus 247 ~V~~~~~ 253 (280)
T 3fku_X 247 TVLGQPK 253 (280)
T ss_dssp EEC----
T ss_pred EECCCCC
Confidence 6655443
No 479
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.53 E-value=8.9e-14 Score=122.68 Aligned_cols=165 Identities=15% Similarity=0.244 Sum_probs=101.5
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEEC--CEE---ecC-C-------------CcEEEe-----eCCCEEEcCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKD--GNI---IGS-G-------------GRRKIF-----ENGNLLISPVSRD 152 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~--g~~---~~~-~-------------~~~~~~-----~~~~l~i~~v~~~ 152 (505)
..+.+.+|++++|.|.+.+.+.+.+.|++. +.. +.. . .+.... ...+|.|.+++.+
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 89 (259)
T 3omz_A 10 KSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIEN 89 (259)
T ss_dssp -CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGG
T ss_pred ceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcc
Confidence 457799999999999999988889999982 211 100 0 011111 1235999999999
Q ss_pred CCEEEEEEEEcCCC---ceeeeEEEEEEeC----------------CeeeeeCCCceEEEeeccEEEEEEeeecCCCCeE
Q psy14886 153 DSGIYSCTATNVHG---MDESKGRLIVLHG----------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 213 (505)
Q Consensus 153 d~G~y~C~~~~~~g---~~~~~~~l~v~~~----------------p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 213 (505)
|+|.|.|.+.+..+ .......|.|... +..+...+....+..|+.++|.|.+.+.. +...
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~-~~~~ 168 (259)
T 3omz_A 90 DSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSW-WSYY 168 (259)
T ss_dssp GCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCC-SSCE
T ss_pred cCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCcc-CCce
Confidence 99999999998765 2333466777653 12333445567889999999999887642 2456
Q ss_pred EEEEeCC--EEecC-----CCCCcccCCeee------ecCCeEEEecCCCCCCEEEEEEEEe
Q psy14886 214 YIWTHNG--VRIGN-----MDLNELETPNIN------IDGGLLEITNASFADAGEYECVVKS 262 (505)
Q Consensus 214 ~~w~~~~--~~~~~-----~~~~~~~~~~~~------~~~~~l~i~~~~~~~~g~y~C~~~n 262 (505)
+.|+++. ..+.. .........++. .....|.|.++..+|+|.|.|.+.+
T Consensus 169 v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 169 IFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp EEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred EEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 7798732 11100 000000001111 1235699999999999999999975
No 480
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.53 E-value=4.9e-14 Score=120.40 Aligned_cols=167 Identities=14% Similarity=0.225 Sum_probs=102.6
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEEe----c------------CCCcEEEeeC-----CCEEEcCCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNII----G------------SGGRRKIFEN-----GNLLISPVSRDD 153 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~~----~------------~~~~~~~~~~-----~~l~i~~v~~~d 153 (505)
+.+.+|++++|.|.+.+.+ .+.+.|+++ +... . ...++.+..+ .+|.|.+++.+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 10 GLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED 89 (215)
T ss_dssp CEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGG
T ss_pred eeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCccc
Confidence 4688999999999998764 468999984 2211 0 1235544421 269999999999
Q ss_pred CEEEEEEEEcCCCc---eeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC
Q psy14886 154 SGIYSCTATNVHGM---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 154 ~G~y~C~~~~~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~ 226 (505)
+|.|.|.+.+..+. ....+.|.|.. +|.+....+ ...+..|+.+.|.|.+.+..+..+.+.|.+++..+...
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~ 168 (215)
T 1c5d_H 90 TAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAP-GCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVH 168 (215)
T ss_dssp CEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECC-CSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCC
T ss_pred CEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccC-ChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCceE
Confidence 99999999886422 12336777763 233332222 22346789999999999873223578899987543211
Q ss_pred CCCc-ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEEEE
Q psy14886 227 DLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 270 (505)
Q Consensus 227 ~~~~-~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~~~ 270 (505)
.... .....+. ..+.|. ....++ |.|+|.|.|..|.....
T Consensus 169 ~~~~~~~~g~~~-~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 169 TFPAVLQSGLYT-LTSSVT--SSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp BCCCEEETTEEE-EEEEEE--ESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred ecCcccCCCCEE-EEEEEe--cccCCC-CeEEEEEEeCCCCccEE
Confidence 1000 0000110 111232 333355 99999999998875443
No 481
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.53 E-value=1.5e-14 Score=124.94 Aligned_cols=164 Identities=21% Similarity=0.243 Sum_probs=103.0
Q ss_pred CCCCCceEEEEEEecc--CCCeEEEEECC--EE---Cc-C--CCCC---CCCCCcEEEEC------CeEEEEcCCCCCCC
Q psy14886 1 MDNQADLTWTCEAFGV--PDVTYSWFRNG--EL---LN-S--ETLP---LEDQDRYFIQD------NVLTIRYLNPERDP 61 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~--p~~~~~W~~~~--~~---l~-~--~~~~---~~~~~~~~~~~------~~L~i~~~~~~~d~ 61 (505)
+.+|++++|.|.+.+. +...+.|+|.. .. +. . .... ....+|+.+.. .+|.|.+++ .+|+
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D~ 91 (230)
T 1ypz_F 13 RPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLE-EEDE 91 (230)
T ss_dssp EETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCC-GGGC
T ss_pred EeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCC-hhhC
Confidence 3589999999999764 56789999942 21 10 0 0000 00346776642 279999999 9999
Q ss_pred eEEEEEEEcc--cCc-e-EeeEEEEEEec--------CCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEE-C
Q psy14886 62 AMYQCRAKNQ--LKT-R-YSSAQLRVLTL--------KPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKK-D 126 (505)
Q Consensus 62 G~Y~C~~~~~--~~~-~-~~~~~l~v~~~--------~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~-~ 126 (505)
|.|.|.+.+. ... . ...+.|.|... +|...+.. +....+.+|+.++|.|.+.+. |. +.|.|++ +
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~-p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~ 170 (230)
T 1ypz_F 92 AIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFL-PSVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKD 170 (230)
T ss_dssp SEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEEC-CCHHHHHHHSCEEEEEEEEEESSCCCEEEEECTT
T ss_pred EEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEEC-CCchhhccCCcceEEEEEeeecCCCeEEEEEccC
Confidence 9999999874 111 1 12456777621 22222211 111224568899999999876 65 5999999 8
Q ss_pred CEEecCCCc-EEEeeC------CCEEEcCCCCCCCEEEEEEEEcCCCce
Q psy14886 127 GNIIGSGGR-RKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMD 168 (505)
Q Consensus 127 g~~~~~~~~-~~~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~ 168 (505)
|..+..... .....+ ..|.|.++.. + |.|+|.|.+.....
T Consensus 171 g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~ 217 (230)
T 1ypz_F 171 GNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKG 217 (230)
T ss_dssp SSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTT
T ss_pred CeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCC
Confidence 776642210 001112 2478877765 4 89999999876643
No 482
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=4.2e-14 Score=104.54 Aligned_cols=92 Identities=11% Similarity=0.102 Sum_probs=74.0
Q ss_pred CCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEEE
Q psy14886 384 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463 (505)
Q Consensus 384 ~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~ 463 (505)
..|..+|.++.+...+.+++.|+|+++ .+.+.+|+|+|+..++..+....+.. ..+.+.|.+|.|++.|.|
T Consensus 5 t~p~~pP~~l~~~~vt~tsi~vsW~pp-----~~~i~~Y~I~y~~~~~~~~~~~~v~~----~~t~~~l~~L~p~T~Y~v 75 (108)
T 2ee3_A 5 SSGLAPPRHLGFSDVSHDAARVFWEGA-----PRPVRLVRVTYVSSEGGHSGQTEAPG----NATSAMLGPLSSSTTYTV 75 (108)
T ss_dssp CCCCCCSSCEEEESCCSSCEEEEESCC-----SSCCSEEEEEEEETTTCCBCCEEEET----TCCEEEECSCCSSCEEEE
T ss_pred ccCCCCCceEEEEEccCCeEEEEeeCC-----CCCccEEEEEEEeCCCCceeEEEcCC----CcCEEEcCCCCCCCEEEE
Confidence 346678999999999999999999983 26799999999988755544334332 336789999999999999
Q ss_pred EEEEecCCCCCCCCceEEEeec
Q psy14886 464 KVQAINDVGPGPESEVVTIWHD 485 (505)
Q Consensus 464 ~v~a~n~~G~g~~s~~~~~~t~ 485 (505)
+|.|+|..|.|+++.. .+.|.
T Consensus 76 ~V~A~~~~g~s~p~~~-~~~T~ 96 (108)
T 2ee3_A 76 RVTCLYPGGGSSTLTG-RVTTK 96 (108)
T ss_dssp EEEEECTTSCEEEEEE-EEECC
T ss_pred EEEEEeCCCcCCCccC-EEEeC
Confidence 9999999999998865 45553
No 483
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.52 E-value=2.7e-15 Score=130.43 Aligned_cols=170 Identities=15% Similarity=0.244 Sum_probs=103.3
Q ss_pred CCCCCceEEEEEEeccC----CCeEEEEECC--EE---C---c------CC---CCCCCCCCcEEEEC------CeEEEE
Q psy14886 1 MDNQADLTWTCEAFGVP----DVTYSWFRNG--EL---L---N------SE---TLPLEDQDRYFIQD------NVLTIR 53 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p----~~~~~W~~~~--~~---l---~------~~---~~~~~~~~~~~~~~------~~L~i~ 53 (505)
+.+|++++|.|.+.+.+ ...+.|+|.. .. + . .. .......+|+.+.. .+|.|.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 91 (239)
T 3tv3_H 12 VEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKLN 91 (239)
T ss_dssp ECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEEEC
T ss_pred EcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEEEC
Confidence 46899999999998754 4589999942 11 1 0 00 00001246776532 359999
Q ss_pred cCCCCCCCeEEEEEEEcccC-----------c--eEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC-
Q psy14886 54 YLNPERDPAMYQCRAKNQLK-----------T--RYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA- 116 (505)
Q Consensus 54 ~~~~~~d~G~Y~C~~~~~~~-----------~--~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~- 116 (505)
+++ .+|+|.|.|.+.+..+ . ......|.|.. .+|.+...+ +...+..|+.++|.|.+.+.
T Consensus 92 ~v~-~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~--~~~~~~~g~~v~l~C~~~~~~ 168 (239)
T 3tv3_H 92 SVT-AADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYF 168 (239)
T ss_dssp SCC-GGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEEC--CCCCC--TTEEEEEEEEEEEB
T ss_pred CCC-hhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEEC--CChhhccCCcEEEEEEEeeEe
Confidence 999 9999999999986531 1 11234566652 123222111 11224579999999999874
Q ss_pred CCC-eEEEEECCEEecCCC-cEEEeeC------CCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEE
Q psy14886 117 PKP-KFVWKKDGNIIGSGG-RRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 174 (505)
Q Consensus 117 p~~-~i~W~~~g~~~~~~~-~~~~~~~------~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l 174 (505)
|.+ .+.|+++|..+.... ......+ ..|.|......| |.|+|.|.+..+.......|
T Consensus 169 p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l 233 (239)
T 3tv3_H 169 PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRV 233 (239)
T ss_dssp SSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEEC
T ss_pred CCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEe
Confidence 534 689999886432100 0011112 247788888888 99999999987655444443
No 484
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.52 E-value=7.7e-14 Score=123.69 Aligned_cols=167 Identities=15% Similarity=0.148 Sum_probs=105.0
Q ss_pred ceEEeeCCCeEEEEeecCCCC-----CCeEEEEEC--CEE---ec---------CCCcEEEeeC---CCEEEcCCCCCCC
Q psy14886 97 SETYAGEGGNVTIFCNPEAAP-----KPKFVWKKD--GNI---IG---------SGGRRKIFEN---GNLLISPVSRDDS 154 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p-----~~~i~W~~~--g~~---~~---------~~~~~~~~~~---~~l~i~~v~~~d~ 154 (505)
..+.+.+|++++|.|.+.+.+ .+.+.|+++ +.. +. ...++..... .+|.|.+++.+|+
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 102 (268)
T 1x9q_A 23 LSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDL 102 (268)
T ss_dssp SEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHC
Confidence 445688999999999998876 479999984 221 11 1245544332 2699999999999
Q ss_pred EEEEEEEEcCCCcee-eeEEEEEEeCCe----------------------eeeeCCCceEEEeeccEEEEEEeeecCCCC
Q psy14886 155 GIYSCTATNVHGMDE-SKGRLIVLHGPS----------------------YYEQLPPKITIAAHRNLQLRCSAHTEELLD 211 (505)
Q Consensus 155 G~y~C~~~~~~g~~~-~~~~l~v~~~p~----------------------~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 211 (505)
|.|.|.+.+..+... ....|.|...+. .....+....+..|+.++|.|.+.+.+...
T Consensus 103 G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~ 182 (268)
T 1x9q_A 103 GVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGH 182 (268)
T ss_dssp EEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGG
T ss_pred EEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccccc
Confidence 999999998754322 235666654321 011123355778899999999998775434
Q ss_pred eEEEEEeC--CEEecC---CC-----------CCcccCCeeee----cCCeEEEecCCCCCCEEEEEEEEec
Q psy14886 212 VAYIWTHN--GVRIGN---MD-----------LNELETPNINI----DGGLLEITNASFADAGEYECVVKST 263 (505)
Q Consensus 212 ~~~~w~~~--~~~~~~---~~-----------~~~~~~~~~~~----~~~~l~i~~~~~~~~g~y~C~~~n~ 263 (505)
..+.|+++ +..+.. .. ........... ....|.|.++..+|+|.|.|.+.+.
T Consensus 183 ~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 183 YWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp CEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 56789874 222100 00 00000111111 1247999999999999999999874
No 485
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=2e-14 Score=109.53 Aligned_cols=97 Identities=18% Similarity=0.161 Sum_probs=79.5
Q ss_pred CCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcC-CCCcEEEEeeecCceeeEEEEcCCccceeeE
Q psy14886 383 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 461 (505)
Q Consensus 383 ~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y 461 (505)
...++.+|.++.+.....++|.|.|++ +.+.++++++|.|+|+..+ ...|....... ..+.+.+.+|.|++.|
T Consensus 12 ~~~~P~~P~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~----~~~~~~i~~L~p~t~Y 85 (117)
T 1uem_A 12 LSDLPGPPSKPQVTDVTKNSVTLSWQP--GTPGTLPASAYIIEAFSQSVSNSWQTVANHV----KTTLYTVRGLRPNTIY 85 (117)
T ss_dssp SCCSCBCCCCCEEEEECSSCEEEECCC--CBCSSSCCCEEEEEEEETTTEEEEEEEEEEE----CSSEEEECSCCTTCEE
T ss_pred CCCCccCCCCCEEEEecCCEEEEEEeC--CCCCCcCceEEEEEEEECCCCCceeEccccc----CcCEEEECCCCCCCEE
Confidence 455667899999988889999999998 4478889999999999875 56676544322 3457899999999999
Q ss_pred EEEEEEecCCCCCCCCceEE-Eeec
Q psy14886 462 EVKVQAINDVGPGPESEVVT-IWHD 485 (505)
Q Consensus 462 ~~~v~a~n~~G~g~~s~~~~-~~t~ 485 (505)
.|+|+|+|..|.|++|+.+. +.|.
T Consensus 86 ~frV~A~n~~G~s~~S~~~~~v~t~ 110 (117)
T 1uem_A 86 LFMVRAINPQGLSDPSPMSDPVRTQ 110 (117)
T ss_dssp EEEEEEEETTEEEEECCCCCCEECC
T ss_pred EEEEEEECCCccCCCcCCCccEEcc
Confidence 99999999999999998877 5554
No 486
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.52 E-value=6.5e-12 Score=105.03 Aligned_cols=243 Identities=13% Similarity=0.161 Sum_probs=145.1
Q ss_pred EeeCCCeEEEEeecCCC-C---CCeEEEEECCEEecCCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 100 YAGEGGNVTIFCNPEAA-P---KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 100 ~v~~g~~v~l~C~~~~~-p---~~~i~W~~~g~~~~~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
.+..|+.++|.|.+.+. | ...+.|+|+|..+... .+.|.+..+...|+|.|+|.+.+..|.......+.
T Consensus 13 ~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa-------T~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~Vt 85 (304)
T 3shs_A 13 CFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN-------TATLTVADATSENAGSYKVTVQDTDTMTSVESEVF 85 (304)
T ss_dssp SBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCE
T ss_pred cccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC-------cceEEeeeccccCCeEEEEEEEECCCCeeeeeeEE
Confidence 36789999999997544 5 3489999999886532 34688999999999999999999888765544344
Q ss_pred EEeCCe--eeeeCCCceEEEeeccEEEEEEe--eecCCC----CeEEEEEeCCEEecCCCCCcccCCeeeecCCeEEEec
Q psy14886 176 VLHGPS--YYEQLPPKITIAAHRNLQLRCSA--HTEELL----DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 247 (505)
Q Consensus 176 v~~~p~--~~~~~~~~~~~~~g~~~~l~C~~--~~~~~~----~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 247 (505)
|...+. .....+....+..+..+.|.+.+ .++.+| .+++.|++++..+.. ...+.+..
T Consensus 86 VT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg--------------Aq~lT~sS 151 (304)
T 3shs_A 86 LMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT--------------TQDITIQE 151 (304)
T ss_dssp EECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES--------------SSEEEECS
T ss_pred EeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC--------------ccccceee
Confidence 433222 22222344455567788898887 443333 579999999987743 23567777
Q ss_pred CCCCCCEEEEEEEEecCCc--EEEEEEEEEcCCCCCC-CceEEEEEeCCeEEEEeecCC-----CCCCCC--ceEEEEEE
Q psy14886 248 ASFADAGEYECVVKSTVGK--ISTKTTVIVEGPPGLP-GGVQVVEVHKTSATIQWTDGA-----TNGRPI--THYKIIAR 317 (505)
Q Consensus 248 ~~~~~~g~y~C~~~n~~g~--~~~~~~l~v~~~p~~p-~~~~~~~~~~~~v~l~w~~~~-----~~~~~i--~~y~v~~~ 317 (505)
....+.|.|+|.+.|..+. .+.++.+.+...+.+. .-..-....+..+.|..-... ..+.|- +.|.++..
T Consensus 152 ~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (304)
T 3shs_A 152 FTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQ 231 (304)
T ss_dssp CCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEEEEE
T ss_pred EEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEEEEe
Confidence 7888999999999998774 3444444443222111 112334445666666554211 122332 34666666
Q ss_pred eCCCCCeEEeeeccc-cceeeeecCceeeEEeeeccCCceeEEEEEEE
Q psy14886 318 TNWNSTWFNVSEHVI-GKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 364 (505)
Q Consensus 318 ~~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~~~y~~~v~a~ 364 (505)
..++..-.....++. ..+--....+.+.+... ..-++.-.|.|.|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 232 REGQLSPTLIGSEVGEALEGFSITPDGHLFKES-ATYDDTAKFWCVAK 278 (304)
T ss_dssp CTTCCSCEEEESSSEECGGGEEECTTSCEEESS-CCGGGCEEEEEEEE
T ss_pred ecCccCchhhhhhhhhhhccceeCCCcceeecc-cccccchheeeHHH
Confidence 555443333322221 00001111223333333 44455667777764
No 487
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=99.52 E-value=7.9e-14 Score=102.84 Aligned_cols=90 Identities=18% Similarity=0.236 Sum_probs=72.0
Q ss_pred CCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCC-CCcEEEEeeecCceeeEEEEcCCccceeeEEE
Q psy14886 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463 (505)
Q Consensus 385 ~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~ 463 (505)
..+.+|.++.+...+.+++.|+|++ +.+.++.+.+|.|+|+..+. ..+....+.. ..+.+.|.+|.|++.|.|
T Consensus 6 t~~~~P~~l~v~~~t~~Sv~lsW~~--p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v~~----~~ts~~l~~L~p~t~Y~~ 79 (103)
T 3t04_D 6 SVSSVPTKLEVVDATPTSLKISWDA--YYSSWQNVKYYRITYGETGGDSPVQEFTVPG----YYSTATISGLKPGVDYTI 79 (103)
T ss_dssp CCCCCCCSCEEEEEETTEEEEECTT--TTTTSCCCCEEEEEEEETTCSSCCEEEEEET----TCCEEEECSCCTTCCEEE
T ss_pred ccCCCCceeEEEecCCCEEEEEccC--CCCCCCccceEEEEEEECCCCCccEEEEcCC----CcCEEEeCCCCCCCEEEE
Confidence 3456899999999999999999998 44568999999999999763 3333333322 346889999999999999
Q ss_pred EEEEecC--CCCCCCCceEE
Q psy14886 464 KVQAIND--VGPGPESEVVT 481 (505)
Q Consensus 464 ~v~a~n~--~G~g~~s~~~~ 481 (505)
+|.|+|. +|.|+ |+++.
T Consensus 80 ~V~A~~~~~~G~~~-S~p~~ 98 (103)
T 3t04_D 80 TVYAYDTFFPGYEP-NSPIS 98 (103)
T ss_dssp EEEEESCCCTTCCC-SCCEE
T ss_pred EEEEEeCCCCCCCC-CCCEE
Confidence 9999999 99999 65544
No 488
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.52 E-value=4.1e-13 Score=121.89 Aligned_cols=180 Identities=10% Similarity=0.044 Sum_probs=110.7
Q ss_pred CCCCCceEEEEEeCCeEEEEeecCCCC-CCCCceEEEEEEeCCCCCeEEeeeccccceeeeecCceeeEEeeeccCCcee
Q psy14886 279 PGLPGGVQVVEVHKTSATIQWTDGATN-GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 357 (505)
Q Consensus 279 p~~p~~~~~~~~~~~~v~l~w~~~~~~-~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~y 357 (505)
..||.++++......++.|+|++|... ++.+..|++.+.. .|.... . ........ +.++..|
T Consensus 4 ~~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~----~~~~~~---~---------~~~~~~~~-~~~~~~y 66 (314)
T 3bpo_C 4 QPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGD----KQDKKI---A---------PETRRSIE-VPLNERI 66 (314)
T ss_dssp CCCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC------CCCEE---E---------SSSEEEEE-CCCSSCE
T ss_pred CCCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecc----cCceEe---c---------cccEEEEE-EcCCCcE
Confidence 367888999888889999999998744 4667788887643 221110 0 11223344 8999999
Q ss_pred EEEEEEEc-CCCcCCCCCCCC-CccCCCCCCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcE
Q psy14886 358 EFKVIAGN-ELGYGEPSSPSP-QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 435 (505)
Q Consensus 358 ~~~v~a~n-~~G~~~~s~~~~-~~~t~~~~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~ 435 (505)
.|+|+|.+ ..|.|.++.+.. .+.+.++.|+.+|.++.....+.+.++++|+++ .+. +.+++|.|.|+..+...+.
T Consensus 67 ~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~--~~~-~~~~~Y~l~y~~~~~~~~~ 143 (314)
T 3bpo_C 67 CLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPG--RNT-SPDTNYTLYYWHRSLEKIH 143 (314)
T ss_dssp EEEEEECC---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECC--C----CCCCEEEEEEESSCSSCE
T ss_pred EEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCC--CCC-CCCccEEEEEEeCCCCccc
Confidence 99999964 566666555532 123567788889999998877788999999983 333 4589999999887644444
Q ss_pred EEEe-eecCceeeEEEEcCC--ccceeeEEEEEEEecCCCCCCCCc
Q psy14886 436 SETL-KEYGNVGIAVVRIPS--EFYYTEYEVKVQAINDVGPGPESE 478 (505)
Q Consensus 436 ~~~~-~~~~~~~~~~~~l~~--L~p~~~Y~~~v~a~n~~G~g~~s~ 478 (505)
.... ........+.+.... +.+.+.|.|+|.|.|..|.+..+.
T Consensus 144 ~C~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~~ 189 (314)
T 3bpo_C 144 QCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPSF 189 (314)
T ss_dssp ECCCEEEETTEEEEEEECCC--------CCEEEEEEETTSCSCCEE
T ss_pred cCcCeecCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceeccc
Confidence 3211 111222233333332 124789999999999999998764
No 489
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.51 E-value=5.3e-14 Score=123.10 Aligned_cols=167 Identities=17% Similarity=0.279 Sum_probs=92.7
Q ss_pred EEeeCCCeEEEEeecCCCC--CCeEEEEEC--CEE---e---c-----------CCCcEEEeeC-----CCEEEcCCCCC
Q psy14886 99 TYAGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---I---G-----------SGGRRKIFEN-----GNLLISPVSRD 152 (505)
Q Consensus 99 ~~v~~g~~v~l~C~~~~~p--~~~i~W~~~--g~~---~---~-----------~~~~~~~~~~-----~~l~i~~v~~~ 152 (505)
..+.+|++++|.|.+.+.+ .+.+.|++. +.. + . ...++.+..+ .+|.|.+++.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (257)
T 3bn9_D 10 GLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAE 89 (257)
T ss_dssp EEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGG
T ss_pred EEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 5688999999999998765 568999984 211 1 0 1245554432 26999999999
Q ss_pred CCEEEEEEEEcCCCc-------------eeeeEEEEEEe----CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEE
Q psy14886 153 DSGIYSCTATNVHGM-------------DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 215 (505)
Q Consensus 153 d~G~y~C~~~~~~g~-------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~ 215 (505)
|+|.|.|.+.+..|. ......|.|.. +|.+.. ..+...+..|..++|.|.+.+..+..+.+.
T Consensus 90 DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~-~~p~~~~~~g~~v~L~C~~~g~~P~pi~v~ 168 (257)
T 3bn9_D 90 DTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFP-LAPSSKSTSGGTAALGCLVKDYFPEPVTVS 168 (257)
T ss_dssp GCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECC-CCC-----------CCCEEEEEBSSCCEEE
T ss_pred hCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEE-ecCcccccCCCcEEEEEEEeeEECCCcEEE
Confidence 999999999987641 11235777764 233222 222233567889999999998633345788
Q ss_pred EEeCCEEecCCCCCc--ccCCeeeecCCeEEEecCCCCCCEEEEEEEEecCCcEE
Q psy14886 216 WTHNGVRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 268 (505)
Q Consensus 216 w~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~~~g~y~C~~~n~~g~~~ 268 (505)
|++++..+....... .....+ ...+.|.|.....++ |.|+|.|.|......
T Consensus 169 W~k~g~~~~~~~~~~~~~~~g~y-~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 169 WNSGALTSGVHTFPAVLQSSGLY-SLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp ETTTTCCSSCEECCCEECTTSCE-EEEEECCCC--------CEEEEEEEGGGTEE
T ss_pred EeeCCCcCCcEecCCeEcCCCCE-EEEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 999876532110000 000011 112345666666567 999999999765533
No 490
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=99.51 E-value=1.3e-13 Score=101.14 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=70.2
Q ss_pred CCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcC-CCCcEEEEeeecCceeeEEEEcCCccceeeEEEEE
Q psy14886 387 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 465 (505)
Q Consensus 387 ~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~v 465 (505)
+.+|.++++...+.++|.|+|++|. +.|.+|.|+|+..+ ...+....+. ...+.+.|.+|.|++.|.|+|
T Consensus 2 p~~P~~l~~~~~~~~sv~lsW~pP~-----~~i~~Y~v~y~~~~~~~~~~~~~~~----~~~t~~~i~~L~p~t~Y~~~V 72 (100)
T 3b83_A 2 LQPPFNIKVTNITLTTAVVTWQPPI-----LPIEGILVTFGRKNDPSDETTVDLT----SSITSLTLTNLEPNTTYEIRI 72 (100)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEESSCTTTCEEEEEC----TTEEEEEECSCCTTCEEEEEE
T ss_pred CccCCccEEEEecCCEEEEEEcCCc-----ccCCEEEEEEEECCCCCCceEEEEC----CcceEEEECCCCCCCEEEEEE
Confidence 5689999999999999999999842 26999999999876 3344432222 245788999999999999999
Q ss_pred EEecCCCCCCCCceEEE
Q psy14886 466 QAINDVGPGPESEVVTI 482 (505)
Q Consensus 466 ~a~n~~G~g~~s~~~~~ 482 (505)
.|+|..|.|+++.....
T Consensus 73 ~A~n~~g~s~p~~~~~~ 89 (100)
T 3b83_A 73 VARNGQQYSPPVSTTFT 89 (100)
T ss_dssp EEEETTEECCCEEEEEE
T ss_pred EEEeCCCCCCCEEEEEE
Confidence 99999999998876644
No 491
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.51 E-value=1.7e-14 Score=125.04 Aligned_cols=169 Identities=20% Similarity=0.313 Sum_probs=101.1
Q ss_pred CCCCCceEEEEEEeccC----CCeEEEEECC--E---EC-----cCC----CCCCCCCCcEEEEC------CeEEEEcCC
Q psy14886 1 MDNQADLTWTCEAFGVP----DVTYSWFRNG--E---LL-----NSE----TLPLEDQDRYFIQD------NVLTIRYLN 56 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p----~~~~~W~~~~--~---~l-----~~~----~~~~~~~~~~~~~~------~~L~i~~~~ 56 (505)
+.+|++++|.|.+.+.+ ...|.|+|.. . .+ ... .......+|+.+.. .+|.|.+++
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 91 (232)
T 3qhz_H 12 VKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNMD 91 (232)
T ss_dssp ECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred ECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcCC
Confidence 46899999999997532 2344999832 1 11 000 01112346776632 269999999
Q ss_pred CCCCCeEEEEEEEccc--------CceEeeEEEEEEe---cCCCccCCCCCceEEeeCCCeEEEEeecCCC-C-CCeEEE
Q psy14886 57 PERDPAMYQCRAKNQL--------KTRYSSAQLRVLT---LKPSFKKRPLESETYAGEGGNVTIFCNPEAA-P-KPKFVW 123 (505)
Q Consensus 57 ~~~d~G~Y~C~~~~~~--------~~~~~~~~l~v~~---~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p-~~~i~W 123 (505)
.+|+|.|.|.+.+.. ........|.|.. .+|.+.... +...+..|+.++|.|.+.+. | ...+.|
T Consensus 92 -~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~~~~P~~~~v~W 168 (232)
T 3qhz_H 92 -PVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVTVSW 168 (232)
T ss_dssp -GGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEEC--C-------CEEEEEEEEEEEBSSCCEEEE
T ss_pred -hhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEec--ccccccCCCcEEEEEEEeeEeCCCeEEEE
Confidence 999999999998652 1122235566652 123332111 22235679999999999875 3 347889
Q ss_pred EECCEEecC---------CCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCCCceeeeEEEE
Q psy14886 124 KKDGNIIGS---------GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 175 (505)
Q Consensus 124 ~~~g~~~~~---------~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~g~~~~~~~l~ 175 (505)
+++|..+.. +..+.. ...|.|......| |.|+|.|.+..+.......+.
T Consensus 169 ~~~g~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~ 226 (232)
T 3qhz_H 169 NSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 226 (232)
T ss_dssp GGGTBCTTEEECCCEECTTSCEEE--EEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EECCEecceeeccceeCCCCCEEE--EEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeC
Confidence 998863311 111111 1247888888888 999999999876655544443
No 492
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=1.2e-13 Score=104.58 Aligned_cols=95 Identities=19% Similarity=0.278 Sum_probs=79.4
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEecCCCcEEEee---CCCEEEcCCCCCCCEEEEEEEEc
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRDDSGIYSCTATN 163 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~~~~~~~~~~---~~~l~i~~v~~~d~G~y~C~~~~ 163 (505)
+|.+...+ ....+.+|+++.|.|.+.|.|.+.+.|++++..+....++.+.. ...|.|.++..+|+|.|+|.|.|
T Consensus 7 pp~i~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 7 GPQIIQFP--EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCEESCCC--CSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCEEEeCC--CCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 56665544 45779999999999999999999999999999887766666553 24699999999999999999999
Q ss_pred CCCceeeeEEEEEEeCCeee
Q psy14886 164 VHGMDESKGRLIVLHGPSYY 183 (505)
Q Consensus 164 ~~g~~~~~~~l~v~~~p~~~ 183 (505)
..|.....+.|.|...|...
T Consensus 85 ~~g~~~~~~~l~V~~~p~~P 104 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKPDPP 104 (114)
T ss_dssp SSCEEECCEEEEEECSCSCC
T ss_pred CCCcEEEEEEEEEECCCCCC
Confidence 99998888999998766543
No 493
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.50 E-value=4.7e-14 Score=119.47 Aligned_cols=160 Identities=16% Similarity=0.171 Sum_probs=100.7
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECC--EECcC---CCCCCCCCCcEEEEC-------CeEEEEcCCCCCCCeEEEEEE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNG--ELLNS---ETLPLEDQDRYFIQD-------NVLTIRYLNPERDPAMYQCRA 68 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~--~~l~~---~~~~~~~~~~~~~~~-------~~L~i~~~~~~~d~G~Y~C~~ 68 (505)
+.+|++++|.|.+.+.+ ..+.|+|.+ ..+.. ........+|+.+.. .+|.|.+++ .+|+|.|.|.+
T Consensus 13 v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~~ 90 (207)
T 1ypz_E 13 LHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQ-LEDSGTYFCAA 90 (207)
T ss_dssp EETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCC-GGGCEEEEEEE
T ss_pred EccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCC-HHHCEEEEEEE
Confidence 46899999999997644 489999953 11110 000001235666542 389999999 99999999999
Q ss_pred EcccC---------c-e-EeeEEEEEEecCCCccCCCCCceEEeeCCCeEEEEeecCCC-CC-CeEEEEECCEEecCC-C
Q psy14886 69 KNQLK---------T-R-YSSAQLRVLTLKPSFKKRPLESETYAGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSG-G 134 (505)
Q Consensus 69 ~~~~~---------~-~-~~~~~l~v~~~~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~-p~-~~i~W~~~g~~~~~~-~ 134 (505)
.+..+ . . ...+.|.|... ..... .+.+.+..+ .+.|.|.+.+. |. +.+.|+++ ..+... .
T Consensus 91 ~~~~~~~p~~~~~~~~~~~~~t~L~V~~~-~~~~~---~P~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~~ 164 (207)
T 1ypz_E 91 DTWHISEGYELGTDKLVFGQGTQVTVEPK-SQPPA---KPSVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEFDP 164 (207)
T ss_dssp ECBCCCTTCCCCCCCCEECCCEEEEEECC-CCCCC---CCEEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEEEECCC
T ss_pred ecCCcccccccccceeeecCccEEEEccC-CCCCC---CCeEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCCcc
Confidence 87632 1 1 12357777642 11111 223333333 37999999875 44 69999999 666433 2
Q ss_pred cEEEeeCCCEEEcCCCC-CCCEEEEEEEEcCCCce
Q psy14886 135 RRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMD 168 (505)
Q Consensus 135 ~~~~~~~~~l~i~~v~~-~d~G~y~C~~~~~~g~~ 168 (505)
......++.+.+..... .|.|.|+|.+.+..+..
T Consensus 165 ~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 165 AIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp EEEECTTSSEEEEECEEESSTTTCEEEEEETTEEE
T ss_pred ceEEcCCCcEEEEEeecccCCCcEEEEEEECCccE
Confidence 22234456776655544 67899999999876544
No 494
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.50 E-value=5e-13 Score=117.19 Aligned_cols=169 Identities=16% Similarity=0.204 Sum_probs=105.8
Q ss_pred ceEEeeCCCeEEEEeecCCCCCCeEEEEECC--E--E-e------------cCCCcEEEee----CCCEEEcCCCCCCCE
Q psy14886 97 SETYAGEGGNVTIFCNPEAAPKPKFVWKKDG--N--I-I------------GSGGRRKIFE----NGNLLISPVSRDDSG 155 (505)
Q Consensus 97 ~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g--~--~-~------------~~~~~~~~~~----~~~l~i~~v~~~d~G 155 (505)
..+.+.+|++++|.|.+. .+.+.+.|+++. . . + ....++.+.. +.+|.|.+++.+|+|
T Consensus 11 ~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G 89 (252)
T 1oga_E 11 KYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTA 89 (252)
T ss_dssp SEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCE
T ss_pred CeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCE
Confidence 557799999999999985 356799999842 1 1 1 0124555542 247999999999999
Q ss_pred EEEEEEEcCC---CceeeeEEEEEEe------CCeeeeeCCCceEEEeeccEEEEEEeeecCCCCeEEEEEeCCEEecCC
Q psy14886 156 IYSCTATNVH---GMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 226 (505)
Q Consensus 156 ~y~C~~~~~~---g~~~~~~~l~v~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~~w~~~~~~~~~~ 226 (505)
.|.|.+.+.. ........|.|.. +|.+....+....+..|+.+.|.|.+.+..++.+.+.|+++|..+...
T Consensus 90 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~ 169 (252)
T 1oga_E 90 FYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 169 (252)
T ss_dssp EEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSS
T ss_pred EEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCC
Confidence 9999999862 1112234566653 232222222222334688999999999864434688899999887643
Q ss_pred CCCcc--------cCCeeeecCCeEEEecCCC-CCCEEEEEEEEecCCc
Q psy14886 227 DLNEL--------ETPNINIDGGLLEITNASF-ADAGEYECVVKSTVGK 266 (505)
Q Consensus 227 ~~~~~--------~~~~~~~~~~~l~i~~~~~-~~~g~y~C~~~n~~g~ 266 (505)
..... .........+.|.|..... ++.+.|+|.|.|....
T Consensus 170 ~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 170 VSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred cccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 21000 0000111123466665544 3678999999997654
No 495
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=99.50 E-value=1.6e-13 Score=101.53 Aligned_cols=94 Identities=19% Similarity=0.122 Sum_probs=73.0
Q ss_pred CCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcC-CCCcEEEEeeecCceeeEEEEcCCccceeeEEEE
Q psy14886 386 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 464 (505)
Q Consensus 386 p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~ 464 (505)
.+.+|.++.+...+.+++.|+|+++ . +.+.+|.|+|+..+ .+.+....+.. ..+.+.|.+|.|++.|.|+
T Consensus 2 ~p~~P~~l~v~~~t~~sv~lsW~~p--~---~~i~~Y~v~y~~~~~~~~~~~~~v~~----~~~~~~l~~L~p~t~Y~~~ 72 (104)
T 2rb8_A 2 RLDAPSQIEVKDVTDTTALITWMPP--S---QPVDGFELTYGIKDVPGDRTTIDLTE----DENQYSIGNLKPDTEYEVS 72 (104)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECC--S---SCCSEEEEEEEETTCTTCCEEEEEET----TCCEEEECSCCTTCEEEEE
T ss_pred CCCCCCccEEEEecCCeEEEEEcCC--C---CccceEEEEEEECcCCCceEEEEcCC----CcCEEEeCCCCCCCEEEEE
Confidence 3578999999999999999999983 2 67999999999875 45565443332 3467899999999999999
Q ss_pred EEEecCCCCCCCCceEEEeecceEE
Q psy14886 465 VQAINDVGPGPESEVVTIWHDPLVI 489 (505)
Q Consensus 465 v~a~n~~G~g~~s~~~~~~t~p~~~ 489 (505)
|.|+|..|.|.++.. .+.|.+..+
T Consensus 73 V~A~~~~g~s~p~~~-~~~T~~~~~ 96 (104)
T 2rb8_A 73 LISRRGDMSSNPAKE-TFTTGLAAA 96 (104)
T ss_dssp EEEEETTEECCCEEE-EEECCC---
T ss_pred EEEEeCCccCCCEEE-EEECCCCcc
Confidence 999999999987653 466665544
No 496
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.49 E-value=5.3e-14 Score=107.91 Aligned_cols=96 Identities=18% Similarity=0.185 Sum_probs=77.2
Q ss_pred CCCCCCcee--eeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCCCcEEEEeeecCceeeEEEEcCCccceeeEE
Q psy14886 385 KPYQAPSRI--GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 462 (505)
Q Consensus 385 ~p~~~P~~~--~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 462 (505)
.+|.+|.++ .+...+.++|.|.|++ +.+.+++|++|.|+|+..+ ..|........ ...+.+.|.+|.|++.|.
T Consensus 16 ~~P~~P~~~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~--~~~~~~~v~~L~p~t~Y~ 90 (121)
T 1wf5_A 16 QLPHAPEHPVATLSTVERRAINLTWTK--PFDGNSPLIRYILEMSENN-APWTVLLASVD--PKATSVTVKGLVPARSYQ 90 (121)
T ss_dssp CCCCCCSSCEEEECSSSTTEEEEECCC--CCCCSSCEEEEEEEEECTT-CCCEEEESSCC--TTCCEEEEESCCTTCEEE
T ss_pred eCCccCCCcceeeEeccCCEEEEEEcC--CCCCCCcceEEEEEEEcCC-CCceEeEcccC--CCccEEEECCcCCCCEEE
Confidence 456788888 7777888999999998 4678889999999999876 77875432222 234678899999999999
Q ss_pred EEEEEecCCCCCCCCceEE-Eeec
Q psy14886 463 VKVQAINDVGPGPESEVVT-IWHD 485 (505)
Q Consensus 463 ~~v~a~n~~G~g~~s~~~~-~~t~ 485 (505)
|||.|+|.+|.|++|+.+. +.|.
T Consensus 91 frV~A~n~~G~s~~S~~~~~~~t~ 114 (121)
T 1wf5_A 91 FRLCAVNDVGKGQFSKDTERVSLP 114 (121)
T ss_dssp EEEEEEESSCEEEECCCCSCEECC
T ss_pred EEEEEEcCCccCCCcCCcceeEcC
Confidence 9999999999999999874 4443
No 497
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=1.6e-13 Score=103.98 Aligned_cols=77 Identities=16% Similarity=0.289 Sum_probs=67.7
Q ss_pred CCCCCceEEEEEEeccCCCeEEEEECCEECcCCCCCCCCCCcEEEE----CCeEEEEcCCCCCCCeEEEEEEEcccCceE
Q psy14886 1 MDNQADLTWTCEAFGVPDVTYSWFRNGELLNSETLPLEDQDRYFIQ----DNVLTIRYLNPERDPAMYQCRAKNQLKTRY 76 (505)
Q Consensus 1 v~~G~~~~l~C~~~~~p~~~~~W~~~~~~l~~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~~~~~~~~~~ 76 (505)
|.+|++++|.|.+.|.|.+.+.|+|++..+. ...++.+. ..+|.|.+++ .+|+|.|+|.|.|..|...
T Consensus 19 v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~N~~g~~~ 90 (114)
T 2cqv_A 19 VRAGESVELFGKVTGTQPITCTWMKFRKQIQ-------ESEHMKVENSENGSKLTILAAR-QEHCGCYTLLVENKLGSRQ 90 (114)
T ss_dssp EETTCCEEEEEEEESSSSCEEEEEESSSBCC-------CSSSEEEEECSSEEEEEETTCC-TTTCEEEEEEEECSSCEEE
T ss_pred EeCCCeEEEEEEEEcCCCCEEEEEECCEECc-------CCCCEEEEEcCCEEEEEECCCC-hhcCEEEEEEEEECCCcEE
Confidence 4689999999999999999999999999887 33466554 4689999999 9999999999999999888
Q ss_pred eeEEEEEEe
Q psy14886 77 SSAQLRVLT 85 (505)
Q Consensus 77 ~~~~l~v~~ 85 (505)
..+.|.|..
T Consensus 91 ~~~~l~V~~ 99 (114)
T 2cqv_A 91 AQVNLTVVD 99 (114)
T ss_dssp CCEEEEEEC
T ss_pred EEEEEEEEC
Confidence 889999986
No 498
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=103.23 Aligned_cols=93 Identities=24% Similarity=0.393 Sum_probs=76.3
Q ss_pred CCCCCCceeeeeccccccEEEEEEeCCccccCCCCceEEEEEEEcCCC-CcEEEEeeecCceeeEEEEcCCccceeeEEE
Q psy14886 385 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 463 (505)
Q Consensus 385 ~p~~~P~~~~~~~~~~~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~ 463 (505)
.+|.+|.++.+.....+++.|.|+++ .++.+.+|.|+|+..+.. .|.... ....+.+.|.+|.|++.|.|
T Consensus 6 ~~P~~P~~~~~~~~~~~sv~l~W~~~----~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~~i~~L~p~t~Y~~ 76 (106)
T 2dju_A 6 SGPKPPIDLVVTETTATSVTLTWDSG----NSEPVTYYGIQYRAAGTEGPFQEVD-----GVATTRYSIGGLSPFSEYAF 76 (106)
T ss_dssp CSCCCCEEEEEEEEETTEEEEEEECC----CSSCCSEEEEEEEETTCCSCCCCBC-----CCCSSEEEEESCCTTCEEEE
T ss_pred cCCcCCCCcEEEeccCCEEEEEEcCC----CCCCceEEEEEEEECCCCCCeEEcc-----CCCccEEEEeCCCCCcEEEE
Confidence 34478999999888899999999983 367899999999987743 555321 12345788999999999999
Q ss_pred EEEEecCCCCCCCCceEEEeecc
Q psy14886 464 KVQAINDVGPGPESEVVTIWHDP 486 (505)
Q Consensus 464 ~v~a~n~~G~g~~s~~~~~~t~p 486 (505)
+|+|+|.+|.|++|+.+.+.|.+
T Consensus 77 ~V~A~n~~G~~~~S~~~~~~T~~ 99 (106)
T 2dju_A 77 RVLAVNSIGRGPPSEAVRARTGE 99 (106)
T ss_dssp EEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEeCCccCCCcccEEeEcCC
Confidence 99999999999999999988864
No 499
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.49 E-value=1.5e-12 Score=123.28 Aligned_cols=205 Identities=17% Similarity=0.232 Sum_probs=131.5
Q ss_pred CEEEEEEEEecCCcEEEEEEEEEcCCCCCCCceEEEEEeCCeEEEEeecCCCCC------CCCceEEEEEEeCCCCCeEE
Q psy14886 253 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG------RPITHYKIIARTNWNSTWFN 326 (505)
Q Consensus 253 ~g~y~C~~~n~~g~~~~~~~l~v~~~p~~p~~~~~~~~~~~~v~l~w~~~~~~~------~~i~~y~v~~~~~~~~~w~~ 326 (505)
...|...+.|..|. ...+.+.-...|.||.++.+.... +.+.|+|++|.... .....|.|+|+..+ ..|..
T Consensus 84 ~~~~~v~~~~~~~~-~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~ 160 (419)
T 2gys_A 84 VDYFSFQPDRPLGT-RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWED 160 (419)
T ss_dssp EEEEEEEESSCCCE-EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTT
T ss_pred ccEEEEeCCccccc-cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhh
Confidence 34455555455443 222222223578899999887765 69999999987532 24578999999886 66754
Q ss_pred eeeccccceeeeecCceeeEEe-eeccCCceeEEEEEEEcCC---CcCCCCCCCCC--ccCCCCCCCCCCceeeeecccc
Q psy14886 327 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNEL---GYGEPSSPSPQ--YNTPADKPYQAPSRIGGGGGKI 400 (505)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~-~~L~~~~~y~~~v~a~n~~---G~~~~s~~~~~--~~t~~~~p~~~P~~~~~~~~~~ 400 (505)
...... ......+. .+|.|++.|+|||+|.|.. +.|.+|+++.. +.+.++. +.+|.++.......
T Consensus 161 ~~~~~~--------~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~~~ 231 (419)
T 2gys_A 161 AAILLS--------NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFDGA 231 (419)
T ss_dssp CEEEEE--------SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEECSS
T ss_pred eeeecc--------cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEECCc
Confidence 422100 11122232 2499999999999999975 45777776544 3455555 56899999988888
Q ss_pred ccEEEEEEeCCccccCCCCceEEEEEEEcCC-C----CcEEE----Eeeec-C--ceeeEEEEcCCccceeeEEEEEEEe
Q psy14886 401 GDLSISWEPLPREKQNAPNIYYKIFWRKKND-T----EFQSE----TLKEY-G--NVGIAVVRIPSEFYYTEYEVKVQAI 468 (505)
Q Consensus 401 ~~v~l~W~~~~~~~~~~~i~~Y~v~~~~~~~-~----~~~~~----~~~~~-~--~~~~~~~~l~~L~p~~~Y~~~v~a~ 468 (505)
+.+.+.|++ .....+ ..+|.|.|+.... + +|... ..... . ....+.+.+.+|.+.+.|.|+|.|.
T Consensus 232 ~~l~c~W~~--~~~~~~-~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~ 308 (419)
T 2gys_A 232 AVLSCSWEV--RKEVAS-SVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPR 308 (419)
T ss_dssp SEEEEEEEE--EHHHHT-TCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEEC
T ss_pred eEEEeEEEC--CCCCCC-ceeEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEc
Confidence 899999998 333333 3679999987642 1 22211 11100 0 1234577899999999999999998
Q ss_pred cCCC
Q psy14886 469 NDVG 472 (505)
Q Consensus 469 n~~G 472 (505)
+..|
T Consensus 309 ~~~~ 312 (419)
T 2gys_A 309 RAEK 312 (419)
T ss_dssp CCCE
T ss_pred cCCc
Confidence 6555
No 500
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=1.6e-13 Score=101.27 Aligned_cols=91 Identities=26% Similarity=0.444 Sum_probs=75.9
Q ss_pred CCCccCCCCCceEEeeCCCeEEEEeecCCCCCCeEEEEECCEEec-CCCcEEEeeCCCEEEcCCCCCCCEEEEEEEEcCC
Q psy14886 87 KPSFKKRPLESETYAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 165 (505)
Q Consensus 87 ~p~~~~~~~~~~~~v~~g~~v~l~C~~~~~p~~~i~W~~~g~~~~-~~~~~~~~~~~~l~i~~v~~~d~G~y~C~~~~~~ 165 (505)
+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+. ...++....+++|.|.++..+|+|.|+|.|.|..
T Consensus 8 ~P~i~~~p--~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 85 (100)
T 2edj_A 8 PPIILQGP--ANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSS 85 (100)
T ss_dssp SCEEEECC--CCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSS
T ss_pred CCEEEeCc--CCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCC
Confidence 34444433 44678899999999999999999999999998886 3455666667889999999999999999999999
Q ss_pred CceeeeEEEEEEeC
Q psy14886 166 GMDESKGRLIVLHG 179 (505)
Q Consensus 166 g~~~~~~~l~v~~~ 179 (505)
|.....+.|.|..+
T Consensus 86 g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 86 GETSWSAVLDVTES 99 (100)
T ss_dssp CCCBCCEEEEEESC
T ss_pred CCEEEEEEEEEecC
Confidence 99888888888654
Done!