Your job contains 1 sequence.
>psy14887
MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR
TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT
TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH
MRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYIFVAFS
The BLAST search returned 12 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14887
(238 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037240 - symbol:Cont "Contactin" species:7227 "Dr... 806 2.6e-79 1
UNIPROTKB|E2RJ85 - symbol:CNTN2 "Uncharacterized protein"... 251 3.8e-20 1
MGI|MGI:97815 - symbol:Ptprs "protein tyrosine phosphatas... 241 1.0e-18 1
RGD|3452 - symbol:Ptprs "protein tyrosine phosphatase, re... 241 1.0e-18 1
UNIPROTKB|Q02246 - symbol:CNTN2 "Contactin-2" species:960... 237 1.2e-18 1
ZFIN|ZDB-GENE-990630-12 - symbol:cntn2 "contactin 2" spec... 234 2.6e-18 1
UNIPROTKB|Q8AV58 - symbol:SDK1 "Protein sidekick-1" speci... 236 4.0e-18 1
UNIPROTKB|H0Y6Z7 - symbol:PTPRF "Receptor-type tyrosine-p... 234 4.4e-18 1
ZFIN|ZDB-GENE-020107-3 - symbol:ptprsa "protein tyrosine ... 234 5.6e-18 1
MGI|MGI:2444413 - symbol:Sdk1 "sidekick homolog 1 (chicke... 234 6.6e-18 1
UNIPROTKB|G3V8P4 - symbol:Ptprf "Receptor-type tyrosine-p... 233 7.1e-18 1
MGI|MGI:102695 - symbol:Ptprf "protein tyrosine phosphata... 233 7.1e-18 1
RGD|3453 - symbol:Ptprf "protein tyrosine phosphatase, re... 233 7.1e-18 1
RGD|621302 - symbol:Cntn5 "contactin 5" species:10116 "Ra... 230 7.4e-18 1
UNIPROTKB|Q9UQ52 - symbol:CNTN6 "Contactin-6" species:960... 228 1.1e-17 1
MGI|MGI:1858223 - symbol:Cntn6 "contactin 6" species:1009... 227 1.4e-17 1
MGI|MGI:104518 - symbol:Cntn2 "contactin 2" species:10090... 227 1.4e-17 1
UNIPROTKB|F1MJR2 - symbol:PTPRD "Uncharacterized protein"... 229 1.8e-17 1
UNIPROTKB|P28685 - symbol:CNTN2 "Contactin-2" species:903... 226 1.8e-17 1
RGD|3821 - symbol:Cntn2 "contactin 2 (axonal)" species:10... 226 1.8e-17 1
UNIPROTKB|F1NVC2 - symbol:CNTN2 "Contactin-2" species:903... 226 1.8e-17 1
UNIPROTKB|E2RE80 - symbol:PTPRF "Uncharacterized protein"... 229 1.9e-17 1
RGD|3253 - symbol:Cntn3 "contactin 3 (plasmacytoma associ... 225 2.3e-17 1
RGD|62008 - symbol:Cntn6 "contactin 6" species:10116 "Rat... 224 2.9e-17 1
UNIPROTKB|G3XAD5 - symbol:PTPRD "Receptor-type tyrosine-p... 227 3.1e-17 1
UNIPROTKB|F1PH17 - symbol:PTPRD "Uncharacterized protein"... 226 3.9e-17 1
UNIPROTKB|A7MBJ4 - symbol:PTPRF "Receptor-type tyrosine-p... 225 5.1e-17 1
MGI|MGI:3042287 - symbol:Cntn5 "contactin 5" species:1009... 222 5.3e-17 1
MGI|MGI:2443847 - symbol:Sdk2 "sidekick homolog 2 (chicke... 225 5.9e-17 1
MGI|MGI:99534 - symbol:Cntn3 "contactin 3" species:10090 ... 219 1.0e-16 1
UNIPROTKB|F1SFM0 - symbol:CNTN4 "Uncharacterized protein"... 214 1.1e-16 1
UNIPROTKB|E1BE12 - symbol:CNTN4 "Uncharacterized protein"... 217 1.3e-16 1
UNIPROTKB|E1BPC9 - symbol:LOC100140960 "Uncharacterized p... 218 1.3e-16 1
UNIPROTKB|E1BIU8 - symbol:PTPRS "Uncharacterized protein"... 221 1.4e-16 1
UNIPROTKB|Q8AV57 - symbol:SDK2 "Protein sidekick-2" speci... 221 1.6e-16 1
UNIPROTKB|Q9P232 - symbol:CNTN3 "Contactin-3" species:960... 217 1.6e-16 1
UNIPROTKB|O94779 - symbol:CNTN5 "Contactin-5" species:960... 217 1.8e-16 1
ZFIN|ZDB-GENE-060929-776 - symbol:cntn4 "contactin 4" spe... 216 2.1e-16 1
UNIPROTKB|P10586 - symbol:PTPRF "Receptor-type tyrosine-p... 219 2.2e-16 1
UNIPROTKB|G3XAD4 - symbol:CNTN4 "Contactin 4, isoform CRA... 214 2.4e-16 1
UNIPROTKB|F1M2Y2 - symbol:Ptprd "Protein Ptprd" species:1... 218 2.4e-16 1
UNIPROTKB|F1M678 - symbol:Ptprd "Protein Ptprd" species:1... 218 2.6e-16 1
RGD|621361 - symbol:Cntn4 "contactin 4" species:10116 "Ra... 215 2.7e-16 1
MGI|MGI:1095737 - symbol:Cntn4 "contactin 4" species:1009... 215 2.7e-16 1
UNIPROTKB|G8JL96 - symbol:PTPRS "Receptor-type tyrosine-p... 218 2.9e-16 1
UNIPROTKB|Q13332 - symbol:PTPRS "Receptor-type tyrosine-p... 218 2.9e-16 1
UNIPROTKB|E9PDC5 - symbol:PTPRS "Receptor-type tyrosine-p... 218 2.9e-16 1
UNIPROTKB|Q7Z5N4 - symbol:SDK1 "Protein sidekick-1" speci... 218 3.4e-16 1
UNIPROTKB|Q8IWV2 - symbol:CNTN4 "Contactin-4" species:960... 214 3.4e-16 1
UNIPROTKB|Q58EX2 - symbol:SDK2 "Protein sidekick-2" speci... 216 5.4e-16 1
UNIPROTKB|F1N888 - symbol:PTPRS "Uncharacterized protein"... 215 5.9e-16 1
UNIPROTKB|F1NWE4 - symbol:PTPRS "Uncharacterized protein"... 215 5.9e-16 1
UNIPROTKB|F1SMP3 - symbol:PTPRD "Uncharacterized protein"... 210 1.3e-15 1
UNIPROTKB|G3XAE2 - symbol:PTPRD "Receptor-type tyrosine-p... 211 1.6e-15 1
UNIPROTKB|P23468 - symbol:PTPRD "Receptor-type tyrosine-p... 211 1.6e-15 1
UNIPROTKB|F1P3U6 - symbol:CNTN4 "Uncharacterized protein"... 207 1.9e-15 1
UNIPROTKB|E2RE81 - symbol:PTPRF "Uncharacterized protein"... 210 2.0e-15 1
UNIPROTKB|F1NUS6 - symbol:CHL1 "Uncharacterized protein" ... 207 2.4e-15 1
UNIPROTKB|F1PIE8 - symbol:CNTN5 "Uncharacterized protein"... 205 3.1e-15 1
UNIPROTKB|E2R6Z2 - symbol:PTPRS "Uncharacterized protein"... 207 4.2e-15 1
UNIPROTKB|I3LGE9 - symbol:PTPRS "Uncharacterized protein"... 206 5.1e-15 1
UNIPROTKB|F1NQ49 - symbol:F1NQ49 "Uncharacterized protein... 206 5.3e-15 1
UNIPROTKB|F1NQ48 - symbol:F1NQ48 "Uncharacterized protein... 206 5.4e-15 1
UNIPROTKB|F1STI0 - symbol:CNTN5 "Uncharacterized protein"... 199 1.5e-14 1
UNIPROTKB|F1NYN7 - symbol:CNTN5 "Contactin-5" species:903... 198 1.7e-14 1
UNIPROTKB|Q90W79 - symbol:CNTN5 "Contactin-5" species:903... 198 1.7e-14 1
MGI|MGI:97812 - symbol:Ptprd "protein tyrosine phosphatas... 201 1.8e-14 1
UNIPROTKB|F6Y0K4 - symbol:PTPRS "Uncharacterized protein"... 201 1.8e-14 1
UNIPROTKB|P14781 - symbol:CNTN1 "Contactin-1" species:903... 197 2.2e-14 1
UNIPROTKB|E1BUX6 - symbol:CNTN1 "Contactin-1" species:903... 197 2.4e-14 1
UNIPROTKB|F1N897 - symbol:PTPRF "Uncharacterized protein"... 198 3.5e-14 1
ZFIN|ZDB-GENE-030427-1 - symbol:cntn1a "contactin 1a" spe... 195 3.7e-14 1
UNIPROTKB|F1MVI0 - symbol:CNTN1 "Contactin-1" species:991... 193 5.9e-14 1
UNIPROTKB|Q9BMN8 - symbol:ptp-3 "Tyrosine-protein phospha... 193 1.5e-13 1
WB|WBGene00004215 - symbol:ptp-3 species:6239 "Caenorhabd... 193 1.5e-13 1
UNIPROTKB|F1SHN1 - symbol:LOC100521555 "Uncharacterized p... 187 2.6e-13 1
ZFIN|ZDB-GENE-030131-5640 - symbol:cntn5 "contactin 5" sp... 187 2.9e-13 1
UNIPROTKB|F1LNF4 - symbol:Ptprf "Receptor-type tyrosine-p... 188 3.0e-13 1
ZFIN|ZDB-GENE-041210-236 - symbol:cntn1b "contactin 1b" s... 186 3.4e-13 1
ZFIN|ZDB-GENE-061204-4 - symbol:prtga "protogenin homolog... 186 3.9e-13 1
UNIPROTKB|Q28106 - symbol:CNTN1 "Contactin-1" species:991... 185 4.2e-13 1
UNIPROTKB|Q92823 - symbol:NRCAM "Neuronal cell adhesion m... 186 4.5e-13 1
FB|FBgn0000464 - symbol:Lar "Leukocyte-antigen-related-li... 188 4.7e-13 1
UNIPROTKB|F1LM72 - symbol:Ptprd "Protein Ptprd" species:1... 186 4.9e-13 1
WB|WBGene00004371 - symbol:rig-4 species:6239 "Caenorhabd... 188 5.5e-13 1
MGI|MGI:105980 - symbol:Cntn1 "contactin 1" species:10090... 183 6.9e-13 1
RGD|621300 - symbol:Cntn1 "contactin 1" species:10116 "Ra... 183 6.9e-13 1
UNIPROTKB|F5GWT7 - symbol:PTPRD "Receptor-type tyrosine-p... 184 8.8e-13 1
UNIPROTKB|F5GWY7 - symbol:PTPRD "Receptor-type tyrosine-p... 184 8.8e-13 1
UNIPROTKB|F5GWR7 - symbol:PTPRD "Receptor-type tyrosine-p... 184 8.8e-13 1
FB|FBgn0021764 - symbol:sdk "sidekick" species:7227 "Dros... 185 1.1e-12 1
UNIPROTKB|H0Y7Z9 - symbol:PTPRF "Receptor-type tyrosine-p... 182 1.2e-12 1
UNIPROTKB|Q12860 - symbol:CNTN1 "Contactin-1" species:960... 179 1.8e-12 1
UNIPROTKB|F1P5C5 - symbol:NRCAM "Uncharacterized protein"... 180 1.9e-12 1
UNIPROTKB|P35331 - symbol:P35331 "Neuronal cell adhesion ... 180 1.9e-12 1
MGI|MGI:1098266 - symbol:Chl1 "cell adhesion molecule wit... 178 2.9e-12 1
MGI|MGI:104750 - symbol:Nrcam "neuron-glia-CAM-related ce... 176 5.0e-12 1
UNIPROTKB|E1BLM2 - symbol:E1BLM2 "Uncharacterized protein... 176 5.3e-12 1
UNIPROTKB|P32004 - symbol:L1CAM "Neural cell adhesion mol... 174 8.2e-12 1
UNIPROTKB|F1S293 - symbol:L1CAM "Uncharacterized protein"... 174 8.2e-12 1
WARNING: Descriptions of 187 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0037240 [details] [associations]
symbol:Cont "Contactin" species:7227 "Drosophila
melanogaster" [GO:0007155 "cell adhesion" evidence=ISS] [GO:0005918
"septate junction" evidence=IDA;NAS] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0019991 "septate junction assembly"
evidence=IMP] [GO:0005919 "pleated septate junction" evidence=IDA]
[GO:0045197 "establishment or maintenance of epithelial cell
apical/basal polarity" evidence=IC] [GO:0021682 "nerve maturation"
evidence=IMP] [GO:0008366 "axon ensheathment" evidence=IMP]
[GO:0060857 "establishment of glial blood-brain barrier"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001304 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00034
SMART:SM00060 EMBL:AE014297 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0005918 GO:GO:0060857 GO:GO:0019991
GO:GO:0031225 GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
InterPro:IPR013098 Pfam:PF07679 GO:GO:0045197
GeneTree:ENSGT00690000101868 GO:GO:0008366 eggNOG:NOG293951
OMA:DTQYFIE EMBL:AY229991 EMBL:BT021333 EMBL:AY095040
RefSeq:NP_649461.2 UniGene:Dm.12849 ProteinModelPortal:Q9VN14
SMR:Q9VN14 MINT:MINT-1029069 STRING:Q9VN14 PaxDb:Q9VN14
PRIDE:Q9VN14 EnsemblMetazoa:FBtr0078917 GeneID:40553
KEGG:dme:Dmel_CG1084 UCSC:CG1084-RA CTD:40553 FlyBase:FBgn0037240
HOGENOM:HOG000034813 InParanoid:Q9VN14 OrthoDB:EOG4SXKTC
GenomeRNAi:40553 NextBio:819350 Bgee:Q9VN14 GermOnline:CG1084
GO:GO:0021682 InterPro:IPR008646 Pfam:PF05473 Uniprot:Q9VN14
Length = 1390
Score = 806 (288.8 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 146/205 (71%), Positives = 174/205 (84%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
MPQVAPQ + +NST NVTW PI++ RENIRG+LIGHR+KYWK + EE +VYYLSR
Sbjct: 1152 MPQVAPQKPIALAYNSTCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEEDSVYYLSR 1211
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TTRNWALIVGLQPDT Y+VKVMAYN AGEGPESER+ ERTYRKAPQKPPS+VH+ GINP+
Sbjct: 1212 TTRNWALIVGLQPDTYYFVKVMAYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPS 1271
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
TV V WRYVSPS +EEP+ GYKVR+WE DQ+M AN+TI+P+G L++ I +L+PGK Y+
Sbjct: 1272 TVRVVWRYVSPSQDEEPVEGYKVRIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYN 1331
Query: 181 MRVLAFSNGGDGRMSSPAITFQMGE 205
MRVLA+SNGGDGRMSSP + FQMG+
Sbjct: 1332 MRVLAYSNGGDGRMSSPTLHFQMGK 1356
Score = 183 (69.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 53/198 (26%), Positives = 94/198 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P +AP+ V G + +TW+P+ ++ G I +++ +WK E A + +
Sbjct: 1050 PYIAPRNVGGGGGKIGDLTITWDPLLPQEQHSHG--IHYKV-FWKLKGAIEWASDEIKKQ 1106
Query: 62 TRNWALIVGLQPD---TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
+V + + T+Y VKV A N+ G+GPESE + + PQ P N
Sbjct: 1107 DHMGVAVVNIPLNNYYTEYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYN 1166
Query: 119 PTTVHVTWRYVSPSFEE--EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD--ADIVDLS 174
T +VTW+ + S E +IG++++ W+ + D++ + T A IV L
Sbjct: 1167 STCFNVTWQPIDMSRENIRGKLIGHRLKYWKTTH---QEEDSVYYLSRTTRNWALIVGLQ 1223
Query: 175 PGKRYHMRVLAFSNGGDG 192
P Y ++V+A++ G+G
Sbjct: 1224 PDTYYFVKVMAYNAAGEG 1241
>UNIPROTKB|E2RJ85 [details] [associations]
symbol:CNTN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071206 "establishment of protein
localization to juxtaparanode region of axon" evidence=IEA]
[GO:0060168 "positive regulation of adenosine receptor signaling
pathway" evidence=IEA] [GO:0048710 "regulation of astrocyte
differentiation" evidence=IEA] [GO:0048168 "regulation of neuronal
synaptic plasticity" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0045163 "clustering of
voltage-gated potassium channels" evidence=IEA] [GO:0044224
"juxtaparanode region of axon" evidence=IEA] [GO:0043621 "protein
self-association" evidence=IEA] [GO:0043209 "myelin sheath"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0033268 "node of Ranvier" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0031133 "regulation of axon
diameter" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0021853 "cerebral cortex GABAergic interneuron
migration" evidence=IEA] [GO:0010954 "positive regulation of
protein processing" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001948 "glycoprotein binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0007411 GO:GO:0001764
GO:GO:0009986 GO:GO:0000226 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043025 GO:GO:0007612 GO:GO:0030246 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045665 GO:GO:0008076 GO:GO:0031623 GO:GO:0022010
GO:GO:0010954 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007413
GO:GO:0033268 GO:GO:0048168 GO:GO:0007628 GO:GO:0021853
GO:GO:0043209 GeneTree:ENSGT00550000074380 OMA:ECFAFGN
GO:GO:0044224 GO:GO:0045163 GO:GO:0071206 GO:GO:0060168
GO:GO:0048710 GO:GO:0031133 EMBL:AAEX03018248 EMBL:AAEX03018249
EMBL:AAEX03018250 ProteinModelPortal:E2RJ85
Ensembl:ENSCAFT00000037921 Uniprot:E2RJ85
Length = 1013
Score = 251 (93.4 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 51/142 (35%), Positives = 80/142 (56%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+VAP V+++G +S+ +NVTW P++ +++ G L+G+ I+YWK + E A +
Sbjct: 785 PRVAPTKVWAKGVSSSEMNVTWEPVQ---QDMNGILLGYEIRYWKAGDKEAAADRVRTAG 841
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
A + GL PDTKY+V + AYN AG GP S T + PQ+PP + + +T
Sbjct: 842 LDTSARVTGLHPDTKYHVTIRAYNRAGTGPTSPSANATTMKPPPQRPPDNISWT-FSSST 900
Query: 122 VHVTWRYVSPSFEEEPIIGYKV 143
+ + W V P E + GYK+
Sbjct: 901 LSIKWDPVVPFRNESAVTGYKM 922
Score = 205 (77.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 51/198 (25%), Positives = 90/198 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP G+ G + + W P+ RE G G+ + + ++
Sbjct: 683 PSVAPSGLSGGGGAPGELILNWTPVP--REYQNGDGFGYLLSFRRQGGSGWQTARVPGAD 740
Query: 62 TRNWALIV-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+++ ++P T + VK+ +YN G+GPES L + + P+ P+ V KG++ +
Sbjct: 741 AQHFVYSNDSVRPYTPFEVKIRSYNRRGDGPESLTALVHSAEEEPRVAPTKVWAKGVSSS 800
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++VTW V ++GY++R W+ D A D + G A + L P +YH
Sbjct: 801 EMNVTWEPVQQDMNGI-LLGYEIRYWKAG-DKEAAADRVRTAGLDTSARVTGLHPDTKYH 858
Query: 181 MRVLAFSNGGDGRMSSPA 198
+ + A++ G G S A
Sbjct: 859 VTIRAYNRAGTGPTSPSA 876
>MGI|MGI:97815 [details] [associations]
symbol:Ptprs "protein tyrosine phosphatase, receptor type, S"
species:10090 "Mus musculus" [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] [GO:0006470 "protein
dephosphorylation" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016791 "phosphatase activity" evidence=IEA]
[GO:0021510 "spinal cord development" evidence=IMP] [GO:0021549
"cerebellum development" evidence=IMP] [GO:0021766 "hippocampus
development" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=IMP] [GO:0022038 "corpus callosum
development" evidence=IMP] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 MGI:MGI:97815 GO:GO:0016021
GO:GO:0021987 GO:GO:0021766 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0004725 GO:GO:0035335 GO:GO:0021549 GO:GO:0021510
InterPro:IPR013098 Pfam:PF07679 GO:GO:0022038 eggNOG:COG5599
GeneTree:ENSGT00590000082937 HOVERGEN:HBG053758 CTD:5802 KO:K06778
EMBL:X82288 EMBL:D28530 EMBL:AK159320 EMBL:AK169714 EMBL:CT009637
EMBL:BC052462 EMBL:BC083188 IPI:IPI00230067 IPI:IPI00467688
IPI:IPI00754853 IPI:IPI00915502 IPI:IPI00915505 IPI:IPI00915512
RefSeq:NP_001239382.1 RefSeq:NP_001239384.1 RefSeq:NP_001239385.1
RefSeq:NP_035348.2 UniGene:Mm.258771 PDB:3SR9 PDBsum:3SR9
ProteinModelPortal:B0V2N1 SMR:B0V2N1 IntAct:B0V2N1 STRING:B0V2N1
PhosphoSite:B0V2N1 PaxDb:B0V2N1 PRIDE:B0V2N1
Ensembl:ENSMUST00000067538 Ensembl:ENSMUST00000086828 GeneID:19280
KEGG:mmu:19280 UCSC:uc008dbx.2 UCSC:uc008dby.2 UCSC:uc008dca.2
InParanoid:B0V2N1 OMA:TTMIVQW OrthoDB:EOG44J2H5 NextBio:296192
Bgee:B0V2N1 Genevestigator:B0V2N1 Uniprot:B0V2N1
Length = 1907
Score = 241 (89.9 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 63/207 (30%), Positives = 94/207 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P E G L+G+ ++Y ++P+ V +
Sbjct: 605 PSAPPQDVKCTSLRSTAILVSWRPPP--PETHNGALVGYSVRYRPLGSEDPDPKEVNNIP 662
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L+ T+Y V +AY G GPES + RT P PP V + +N
Sbjct: 663 PTTTQ-ILLEALEKWTEYRVTAVAYTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNA 721
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T + V WR +P + I GY+V ++ +R I I + + + I +L P
Sbjct: 722 TAIRVLWRSPTPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDIMLADAQEMVITNLQPET 781
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 782 AYSITVAAYTMKGDGARSKPKVVVTKG 808
Score = 169 (64.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I VTW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 332 ATSITVTWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 383
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ V W P
Sbjct: 384 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWE--EPVEPN 441
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 442 GLIRGYRV-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 500
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 501 DPIQVKTQQG 510
Score = 138 (53.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 57/201 (28%), Positives = 95/201 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R ++T + V W E + N G + G+R+ Y E PE +
Sbjct: 413 PASAPRNVQARMLSATTMIVQWE--EPVEPN--GLIRGYRVYYTME--PEHPVGNWQKHN 466
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + + + +
Sbjct: 467 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-LRAEAKSE 525
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD---ADIV-DLSP 175
T++ ++W +P +E +I Y++ E D R + VG T D A +V DL P
Sbjct: 526 TSIGLSWS--AP--RQESVIKYELLFREGD----RGRE----VGRTFDPTTAFVVEDLKP 573
Query: 176 GKRYHMRVLAFSNGGDGRMSS 196
Y R+ A S G G ++
Sbjct: 574 NTEYAFRLAARSPQGLGAFTA 594
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/198 (24%), Positives = 86/198 (43%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + + + T+I ++W+ +E++ I + + + + D E + TT
Sbjct: 515 PMNLRAEAKSETSIGLSWSAPR--QESV----IKYELLFREGDRGREVGRTF-DPTT--- 564
Query: 66 ALIV-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
A +V L+P+T+Y ++ A + G G + +RT + P PP V + T + V
Sbjct: 565 AFVVEDLKPNTEYAFRLAARSPQGLGAFTAVVRQRTLQAKPSAPPQDVKCTSLRSTAILV 624
Query: 125 TWRYVSPSFEEEPIIGYKVR---VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
+WR P ++GY VR + D D N+ IP T + L Y +
Sbjct: 625 SWRPPPPETHNGALVGYSVRYRPLGSEDPDPKEVNN--IPP-TTTQILLEALEKWTEYRV 681
Query: 182 RVLAFSNGGDGRMSSPAI 199
+A++ G G SSP +
Sbjct: 682 TAVAYTEVGPGPESSPVV 699
>RGD|3452 [details] [associations]
symbol:Ptprs "protein tyrosine phosphatase, receptor type, S"
species:10116 "Rattus norvegicus" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IDA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 SMART:SM00194 RGD:3452
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155 GO:GO:0004725
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG053758 CTD:5802 KO:K06778
EMBL:L11587 EMBL:BC105753 IPI:IPI00214375 IPI:IPI00655248 PIR:I58148
PIR:S46217 RefSeq:NP_062013.1 UniGene:Rn.91202 PDB:2NV5 PDBsum:2NV5
ProteinModelPortal:Q64605 SMR:Q64605 PhosphoSite:Q64605 PRIDE:Q64605
GeneID:25529 KEGG:rno:25529 BindingDB:Q64605 ChEMBL:CHEMBL3108
EvolutionaryTrace:Q64605 NextBio:607019 Genevestigator:Q64605
Uniprot:Q64605
Length = 1907
Score = 241 (89.9 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 63/207 (30%), Positives = 94/207 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P E G L+G+ ++Y ++P+ V +
Sbjct: 605 PSAPPQDVKCTSLRSTAILVSWRPPP--PETHNGALVGYSVRYRPLGSEDPDPKEVNNIP 662
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L+ T+Y V +AY G GPES + RT P PP V + +N
Sbjct: 663 PTTTQ-ILLEALEKWTEYRVTAVAYTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNA 721
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T + V WR +P + I GY+V ++ +R I I + + + I +L P
Sbjct: 722 TAIRVLWRSPTPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDIMLADAQEMVITNLQPET 781
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 782 AYSITVAAYTMKGDGARSKPKVVVTKG 808
Score = 169 (64.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I VTW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 332 ATSITVTWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 383
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ V W P
Sbjct: 384 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWE--EPVEPN 441
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 442 GLIRGYRV-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 500
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 501 DPIQVKTQQG 510
Score = 138 (53.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 57/201 (28%), Positives = 95/201 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R ++T + V W E + N G + G+R+ Y E PE +
Sbjct: 413 PASAPRNVQARMLSATTMIVQWE--EPVEPN--GLIRGYRVYYTME--PEHPVGNWQKHN 466
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + + + +
Sbjct: 467 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-LRAEAKSE 525
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD---ADIV-DLSP 175
T++ ++W +P +E +I Y++ E D R + VG T D A +V DL P
Sbjct: 526 TSIGLSWS--AP--RQESVIKYELLFREGD----RGRE----VGRTFDPTTAFVVEDLKP 573
Query: 176 GKRYHMRVLAFSNGGDGRMSS 196
Y R+ A S G G ++
Sbjct: 574 NTEYAFRLAARSPQGLGAFTA 594
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 48/198 (24%), Positives = 86/198 (43%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + + + T+I ++W+ +E++ I + + + + D E + TT
Sbjct: 515 PMNLRAEAKSETSIGLSWSAPR--QESV----IKYELLFREGDRGREVGRTF-DPTT--- 564
Query: 66 ALIV-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
A +V L+P+T+Y ++ A + G G + +RT + P PP V + T + V
Sbjct: 565 AFVVEDLKPNTEYAFRLAARSPQGLGAFTAVVRQRTLQAKPSAPPQDVKCTSLRSTAILV 624
Query: 125 TWRYVSPSFEEEPIIGYKVR---VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
+WR P ++GY VR + D D N+ IP T + L Y +
Sbjct: 625 SWRPPPPETHNGALVGYSVRYRPLGSEDPDPKEVNN--IPP-TTTQILLEALEKWTEYRV 681
Query: 182 RVLAFSNGGDGRMSSPAI 199
+A++ G G SSP +
Sbjct: 682 TAVAYTEVGPGPESSPVV 699
>UNIPROTKB|Q02246 [details] [associations]
symbol:CNTN2 "Contactin-2" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001948 "glycoprotein binding" evidence=IEA]
[GO:0007413 "axonal fasciculation" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010954
"positive regulation of protein processing" evidence=IEA]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0031133 "regulation of axon diameter" evidence=IEA] [GO:0031623
"receptor internalization" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0043621 "protein self-association"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048168 "regulation of neuronal
synaptic plasticity" evidence=IEA] [GO:0048710 "regulation of
astrocyte differentiation" evidence=IEA] [GO:0060168 "positive
regulation of adenosine receptor signaling pathway" evidence=IEA]
[GO:0071206 "establishment of protein localization to juxtaparanode
region of axon" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=TAS] [GO:0034613
"cellular protein localization" evidence=ISS] [GO:0033268 "node of
Ranvier" evidence=ISS] [GO:0044224 "juxtaparanode region of axon"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS] [GO:0045163
"clustering of voltage-gated potassium channels" evidence=ISS]
[GO:0043209 "myelin sheath" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0001764 GO:GO:0009986
GO:GO:0000226 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0034613 GO:GO:0043025 GO:GO:0007612 GO:GO:0031225
GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0045665 GO:GO:0007155
GO:GO:0008076 GO:GO:0042802 GO:GO:0031623 GO:GO:0022010
GO:GO:0007160 GO:GO:0010954 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007413 GO:GO:0033268 GO:GO:0048168 GO:GO:0007628
GO:GO:0021853 GO:GO:0043209 GO:GO:0044456 HOVERGEN:HBG051047
eggNOG:NOG293951 HOGENOM:HOG000059617 CTD:6900 KO:K06760
OrthoDB:EOG490786 EMBL:X68274 EMBL:X67734 EMBL:X84420 EMBL:AL583832
EMBL:X92681 IPI:IPI00024966 PIR:S35508 RefSeq:NP_005067.1
UniGene:Hs.519220 PDB:2OM5 PDBsum:2OM5 ProteinModelPortal:Q02246
SMR:Q02246 IntAct:Q02246 MINT:MINT-2805397 STRING:Q02246
PhosphoSite:Q02246 DMDM:399092 PaxDb:Q02246 PRIDE:Q02246
Ensembl:ENST00000331830 GeneID:6900 KEGG:hsa:6900 UCSC:uc001hbq.1
GeneCards:GC01P205012 HGNC:HGNC:2172 HPA:HPA001397 HPA:HPA012497
MIM:190197 neXtProt:NX_Q02246 PharmGKB:PA26686 InParanoid:Q02246
OMA:ECFAFGN PhylomeDB:Q02246 ChiTaRS:CNTN2 EvolutionaryTrace:Q02246
GenomeRNAi:6900 NextBio:26975 Bgee:Q02246 CleanEx:HS_CNTN2
Genevestigator:Q02246 GermOnline:ENSG00000184144 GO:GO:0044224
GO:GO:0045163 GO:GO:0071206 GO:GO:0060168 GO:GO:0048710
GO:GO:0031133 Uniprot:Q02246
Length = 1040
Score = 237 (88.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 49/142 (34%), Positives = 80/142 (56%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+VAP V+++G +S+ +NVTW P++ +++ G L+G+ I+YWK + E A +
Sbjct: 812 PRVAPTKVWAKGVSSSEMNVTWEPVQ---QDMNGILLGYEIRYWKAGDKEAAADRVRTAG 868
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
A + GL P+TKY+V V AYN AG GP S T + P++PP + + ++
Sbjct: 869 LDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANATTMKPPPRRPPGNISWT-FSSSS 927
Query: 122 VHVTWRYVSPSFEEEPIIGYKV 143
+ + W V P E + GYK+
Sbjct: 928 LSIKWDPVVPFRNESAVTGYKM 949
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 53/198 (26%), Positives = 90/198 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP G+ G + V W P+ RE G G+ + + ++ +
Sbjct: 710 PSVAPSGLSGGGGAPGELIVNWTPMS--REYQNGDGFGYLLSFRRQGSTHWQTARVPGAD 767
Query: 62 TRNWALI-VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ + ++P T + VK+ +YN G+GPES L + + P+ P+ V KG++ +
Sbjct: 768 AQYFVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSS 827
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++VTW V ++GY++R W+ D A D + G A + L P +YH
Sbjct: 828 EMNVTWEPVQQDMNGI-LLGYEIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYH 885
Query: 181 MRVLAFSNGGDGRMSSPA 198
+ V A++ G G S A
Sbjct: 886 VTVRAYNRAGTGPASPSA 903
>ZFIN|ZDB-GENE-990630-12 [details] [associations]
symbol:cntn2 "contactin 2" species:7955 "Danio
rerio" [GO:0007409 "axonogenesis" evidence=IMP] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0001764
"neuron migration" evidence=IGI;IMP] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-990630-12 GO:GO:0001764
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007417 GO:GO:0007409 GO:GO:0045773 InterPro:IPR013098
Pfam:PF07679 HOVERGEN:HBG051047 CTD:6900 KO:K06760 HSSP:P28685
EMBL:AF064799 IPI:IPI00482519 RefSeq:NP_571521.1 UniGene:Dr.8147
ProteinModelPortal:Q9W675 SMR:Q9W675 STRING:Q9W675 GeneID:30726
KEGG:dre:30726 NextBio:20807075 Uniprot:Q9W675
Length = 1040
Score = 234 (87.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 50/142 (35%), Positives = 78/142 (54%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P V+P+ + + + I V+W PI+ + NI G L G+ I+YW++ E A +
Sbjct: 813 PTVSPRWINATALTAFEIQVSWEPIQHL--NINGVLRGYEIRYWRQHEREAAADRVRTAG 870
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N A + GL+P+T Y++ V+AYN+AG GP S R T + P +PP V K ++ +
Sbjct: 871 LENTARVTGLRPNTLYHITVLAYNSAGTGPASPRTTVITKKPPPNRPPGNVSWK-VDGSW 929
Query: 122 VHVTWRYVSPSFEEEPIIGYKV 143
V V W +V E ++GYKV
Sbjct: 930 VTVRWDHVKSMDNESAVLGYKV 951
Score = 188 (71.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 52/200 (26%), Positives = 87/200 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP G+ G N + +TW P + RE G G+ + + K+ P T V +
Sbjct: 711 PTVAPSGLGGGGGNRNELIITWTP--MAREYQNGDSFGYILAFRKQGIPTWTVVKVPNVE 768
Query: 62 TRNWALIV-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ + L + V++ AYN GEGP S+ + + + P P ++ +
Sbjct: 769 SSRYVYSNDSLTAYCPFEVRIKAYNKKGEGPFSQIAVVHSAEEEPTVSPRWINATALTAF 828
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V+W + + GY++R W + A D + G A + L P YH
Sbjct: 829 EIQVSWEPIQHLNINGVLRGYEIRYWR-QHEREAAADRVRTAGLENTARVTGLRPNTLYH 887
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+ VLA+++ G G +SP T
Sbjct: 888 ITVLAYNSAGTGP-ASPRTT 906
>UNIPROTKB|Q8AV58 [details] [associations]
symbol:SDK1 "Protein sidekick-1" species:9031 "Gallus
gallus" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0045202 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
EMBL:AF537107 IPI:IPI00596190 RefSeq:NP_989436.1 UniGene:Gga.21885
ProteinModelPortal:Q8AV58 SMR:Q8AV58 PRIDE:Q8AV58 GeneID:373894
KEGG:gga:373894 CTD:221935 HOGENOM:HOG000231052 HOVERGEN:HBG080083
InParanoid:Q8AV58 OrthoDB:EOG4CNQQ4 NextBio:20813426 Uniprot:Q8AV58
Length = 2169
Score = 236 (88.1 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 60/200 (30%), Positives = 96/200 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V R + +++ + W P+ + N +G+RIK+W+ D + +S
Sbjct: 1125 PDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSALLKVISDR 1184
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
I L+ T+Y +++ A+N G GP +E RT P PP V + ++ T
Sbjct: 1185 LERECTIQDLEEWTEYELQIQAFNAIGAGPWNEVVGVRTRESVPSAPPENVSAEAVSSTQ 1244
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYH 180
+ +TW V S + I+GYK+ D D + T+ GN + ++ L Y
Sbjct: 1245 ILLTWSAVPESEQNGLILGYKILYKAKDLDSEPRSQTVR--GNHTQSCLLSGLRKYVLYE 1302
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+RVLAF+ GDG SSP +T
Sbjct: 1303 IRVLAFTRIGDGVPSSPVLT 1322
Score = 210 (79.0 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 58/199 (29%), Positives = 88/199 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ + + G + +I V W P N G L G+ ++Y P E ++
Sbjct: 720 PSAPPKNIVASGRTNQSIMVQWQPPPESEHN--GVLHGYILRYRLAGLPGEYQYKNITSA 777
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N+ L+ L T+Y ++V +YN AG G S E T + P PP V ++ +N TT
Sbjct: 778 EINYCLVTDLIIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTT 837
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKRYH 180
+ W F GYK+ W VD S TI P + + + I +L Y+
Sbjct: 838 IQFLWSPPPQQFINGINQGYKLLAWPVDAPGSVTVVTIAPDFHGVHSGCITNLKKYTTYY 897
Query: 181 MRVLAFSNGGDGRMSSPAI 199
VL F+ GDG S+P +
Sbjct: 898 TSVLCFTTPGDGPRSAPQL 916
Score = 184 (69.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 53/187 (28%), Positives = 91/187 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P +APQ + +++ + +TW+P +N G + G++I YW+ D +T + +
Sbjct: 1653 PAMAPQNIQVNSLSASQLELTWDPPPADSQN--GNIQGYKIYYWEGDVQNDTEKVKVFSS 1710
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
R + L T+Y V + A+N AG+GP S RT++ AP P V + I TT
Sbjct: 1711 LRQLSASKNLTSHTRYLVCISAFNAAGDGPRSRPSAGRTHQAAPSAPSFLVFSE-ITSTT 1769
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPV-GNTLD-ADIVDLSPGKR 178
++V+W P+ + GY+V V+E + + + + + GN + DL+ G
Sbjct: 1770 LNVSWG--EPTAANGVLQGYRV-VYEPLAPVQGVSKVVTVDIKGNWQRWLKVRDLTKGMT 1826
Query: 179 YHMRVLA 185
Y RV A
Sbjct: 1827 YLFRVQA 1833
Score = 172 (65.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 59/205 (28%), Positives = 91/205 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ V NST I W+P ++ I G G+++ W D P V ++
Sbjct: 820 VPTAPPQNVQVEAVNSTTIQFLWSPPP--QQFINGINQGYKLLAWPVDAPGSVTVVTIAP 877
Query: 61 TTR--NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--G 116
+ I L+ T YY V+ + G+GP S L RT KP + H+
Sbjct: 878 DFHGVHSGCITNLKKYTTYYTSVLCFTTPGDGPRSAPQLLRTLE---DKPGAVGHLSFTE 934
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSP 175
I T++ V+W+ P + I GY++ WEV ++ SR T+ TL+ I LS
Sbjct: 935 ILDTSLKVSWQ--EPVEKNGIITGYQLS-WEVYGRNESRLTRTL--TNTTLEYKITGLSS 989
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAIT 200
Y + V A + G G ++S I+
Sbjct: 990 LTTYTIEVAAVTAKGSGWVTSSTIS 1014
Score = 170 (64.9 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 54/208 (25%), Positives = 93/208 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P+ V + +ST I +TW+ + +N G ++G++I Y +D E +
Sbjct: 1227 VPSAPPENVSAEAVSSTQILLTWSAVPESEQN--GLILGYKILYKAKDLDSEPRSQTVRG 1284
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 119
L+ GL+ Y ++V+A+ G+G P S ERT AP PP + +
Sbjct: 1285 NHTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPVLTERTKDDAPG-PPIRLVFPEVRL 1343
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKR 178
T+V + W+ P I+GY++ ++ T + VG+T+ DL+P
Sbjct: 1344 TSVRIVWQ--PPEEPNGIILGYQIAYRLASSSPNKF--TTVEVGSTVRQFTATDLTPESA 1399
Query: 179 YHMRVLAFSNGGDGR-MSSPAITFQMGE 205
Y R A + G G + + IT + E
Sbjct: 1400 YIFRTSAKTRQGWGEPLEATVITTEKRE 1427
Score = 118 (46.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 33/123 (26%), Positives = 51/123 (41%)
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y V + AYN GE P S AP P + + ++ + + +TW +
Sbjct: 1624 RYEVLMTAYNVIGESPTSTPVEVFVGEAAPAMAPQNIQVNSLSASQLELTWDPPPADSQN 1683
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GYK+ WE D + L A +L+ RY + + AF+ GDG S
Sbjct: 1684 GNIQGYKIYYWEGDVQNDTEKVKVFSSLRQLSAS-KNLTSHTRYLVCISAFNAAGDGPRS 1742
Query: 196 SPA 198
P+
Sbjct: 1743 RPS 1745
Score = 66 (28.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P V ++++ V W P + E++ G L+G+RI Y + D +A S+
Sbjct: 1529 VPDEPPSSVLVTPHTTSSVLVQWQPPKA--ESLNGLLLGYRIYYRELDYDAGSATE--SK 1584
Query: 61 TTRN-WALIVGLQPDTKY 77
+N AL L P + +
Sbjct: 1585 AVKNPSALRAELTPQSSF 1602
>UNIPROTKB|H0Y6Z7 [details] [associations]
symbol:PTPRF "Receptor-type tyrosine-protein phosphatase F"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 EMBL:AL583862 EMBL:AC092815
HGNC:HGNC:9670 ChiTaRS:PTPRF ProteinModelPortal:H0Y6Z7 PRIDE:H0Y6Z7
Ensembl:ENST00000429895 Bgee:H0Y6Z7 Uniprot:H0Y6Z7
Length = 1553
Score = 234 (87.4 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 64/202 (31%), Positives = 91/202 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V ST + V+W P N G + + + Y D + V +S
Sbjct: 263 PSAPPQKVMCVSMGSTTVRVSWVPPPADSRN--GVITQYSVAYEAVDGEDRGRHVVDGIS 320
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W L VGL+ T+Y V V A+ + G GPES L RT P PP V ++ +N
Sbjct: 321 REHSSWDL-VGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNS 379
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T VHV W+ PS + I GY+V ++ R I + + + I L+P
Sbjct: 380 TAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPRGLPIIQDVMLAEAQETTISGLTPET 439
Query: 178 RYHMRVLAFSNGGDGRMSSPAI 199
Y + V A++ GDG S P I
Sbjct: 440 TYSVTVAAYTTKGDGARSKPKI 461
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/137 (36%), Positives = 69/137 (50%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 33 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 92
Query: 128 YVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV----DLSPGKRYHMR 182
P E ++ GY+V + D SR NT DA ++ L PG Y +R
Sbjct: 93 ---PPEEPNGLVRGYRV-YYTPD---SRRPPNAWHKHNT-DAGLLTTVGSLLPGITYSLR 144
Query: 183 VLAFSNGGDGRMSSPAI 199
VLAF+ GDG SP I
Sbjct: 145 VLAFTAVGDGP-PSPTI 160
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 15 NSTAINVT---WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
++TA+N W+P + + G L+G+R++Y + D + + + +++ + GL
Sbjct: 475 STTAMNTALLQWHP----PKELPGELLGYRLQYCRADEARPNTIDF-GKDDQHFT-VTGL 528
Query: 72 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 131
T Y ++ A N AG G E E+ + RT P P +H+ G+ +T + W
Sbjct: 529 HKGTTYIFRLAAKNRAGLGEEFEKEI-RTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVL 587
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ II Y V +++ N T TL L P Y ++V A+++ G
Sbjct: 588 AERNGRIISYTVVFRDINSQQELQNITT-DTRFTLTG----LKPDTTYDIKVRAWTSKGS 642
Query: 192 GRMSSPAI 199
G +S P+I
Sbjct: 643 GPLS-PSI 649
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/200 (25%), Positives = 91/200 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D+ ++ T
Sbjct: 70 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDSRRPPNAWHKHNT 124
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P + + T
Sbjct: 125 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAEVESDT 183
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRY 179
+ ++W + P +E II Y++ W + + + T P + TL+ DL P Y
Sbjct: 184 RIQLSW-LLPP---QERIIMYELVYWAAEDEDQQHKVTFDPTSSYTLE----DLKPDTLY 235
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
++ A S+ G G + +P I
Sbjct: 236 RFQLAARSDMGVG-VFTPTI 254
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y ++ A ++ G G +
Sbjct: 196 RIIMYELVYWAAEDEDQQHKVTF--DPTSSYTL-EDLKPDTLYRFQLAARSDMGVGVFTP 252
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP--IIGYKVRVWEVDQDM 152
RT + P PP V + TTV V+W V P + I Y V VD +
Sbjct: 253 TIEARTAQSTPSAPPQKVMCVSMGSTTVRVSW--VPPPADSRNGVITQYSVAYEAVDGE- 309
Query: 153 SRANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 211
R + + + D+V L Y + V A ++ G G SSP + + +++ S
Sbjct: 310 DRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVL---VRTDEDVPS 366
Query: 212 GSP 214
G P
Sbjct: 367 GPP 369
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 50/196 (25%), Positives = 83/196 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NSTA++V W P+ G++ G+++ Y + +N E + +
Sbjct: 364 VPSGPPRKVEVEPLNSTAVHVYWKLPVP---SKQHGQIRGYQVTYVRLENGEPRGLPIIQ 420
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A I GL P+T Y V V AY G+G S+ + T P +P +
Sbjct: 421 DVMLAEAQETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTT--TVPGRPTMMISTTA 478
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
+N T + W P ++GY+++ D+ +R N TI + + L G
Sbjct: 479 MN--TALLQWH--PPKELPGELLGYRLQYCRADE--ARPN-TIDFGKDDQHFTVTGLHKG 531
Query: 177 KRYHMRVLAFSNGGDG 192
Y R+ A + G G
Sbjct: 532 TTYIFRLAAKNRAGLG 547
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + G ++ + W+P L N GR+I + + + ++ N ++ + ++
Sbjct: 560 LPSGFPQNLHVTGLTTSTTELAWDPPVLAERN--GRIISYTVVF-RDINSQQE-LQNITT 615
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TR + GL+PDT Y +KV A+ + G GP S RT Q + T
Sbjct: 616 DTR--FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTM-PVEQVFAKNFRVAAAMKT 672
Query: 121 TVHVTWRYVSPSFEEE-PI-IGYKVRVWEVD 149
+V ++W V S++ P I Y + EVD
Sbjct: 673 SVLLSWE-VPDSYKSAVPFKILYNGQSVEVD 702
>ZFIN|ZDB-GENE-020107-3 [details] [associations]
symbol:ptprsa "protein tyrosine phosphatase, receptor
type, s, a" species:7955 "Danio rerio" [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0016791 "phosphatase
activity" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 SMART:SM00194
ZFIN:ZDB-GENE-020107-3 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:CU137651 EMBL:CU539053
EMBL:CU539058 EMBL:CU539059 EMBL:CU652528 EMBL:FP565454
IPI:IPI00806742 Ensembl:ENSDART00000083308 ArrayExpress:F1QJW2
Bgee:F1QJW2 Uniprot:F1QJW2
Length = 1902
Score = 234 (87.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 61/205 (29%), Positives = 92/205 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ + +ST + V+W P +N G L G+ ++Y E + ++
Sbjct: 604 PSAPPQDIKCSSSSSTVLMVSWRPPPAESQN--GELAGYIVRYAVVGAGAEVSTEHVEAP 661
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T + L+ L+ T Y V V A + G GPESE L RT P PP V ++ +N T
Sbjct: 662 TSDQILLQRLEKWTMYRVTVAASTSVGSGPESEPLLCRTDEDVPGAPPRRVEVEVLNSTA 721
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGKRY 179
+ V WR + P + I GY+V V+ SR I + + + + I L P Y
Sbjct: 722 IKVMWRSLLPGKQHGQIRGYQVHYVRVENGESRGLPLIKDVMLADAQEMVIGGLQPDTTY 781
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMG 204
+ V A++ GDG S P + G
Sbjct: 782 SITVAAYTTKGDGARSKPKLVLTKG 806
Score = 196 (74.1 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 57/182 (31%), Positives = 89/182 (48%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW ++ + H I ++ +PE S TT ++ I GL P+T
Sbjct: 330 ATSITITW-------DSGNPEPVSHYIIQYRAKSPESKFETVDSITTTRYS-IGGLSPNT 381
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y ++V A+N G+GP SE RT +AP PP + + I+ TV V W P
Sbjct: 382 DYEIRVSAFNTIGQGPPSEPVEARTGEQAPASPPRNIQARIISQNTVLVRWD--EPDEPN 439
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D + + I V +++ I L + Y +RVLAF++ GDG S
Sbjct: 440 GQIKGYRV-YYTMDPTLPMSMWQIHNVQDSVLTTIQSLVTSETYTIRVLAFTSVGDGPFS 498
Query: 196 SP 197
P
Sbjct: 499 DP 500
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/198 (28%), Positives = 88/198 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P+ V NSTAI V W L+ G++ G+++ Y + +N E + +
Sbjct: 704 VPGAPPRRVEVEVLNSTAIKVMWR--SLLPGKQHGQIRGYQVHYVRVENGESRGLPLIKD 761
Query: 61 TTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
A +I GLQPDT Y + V AY G+G S+ L T P P +V+
Sbjct: 762 VMLADAQEMVIGGLQPDTTYSITVAAYTTKGDGARSKPKLVLTKGAVPGPPFLSVNQN-- 819
Query: 118 NPTTVHVTWR---YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
+ +T + W+ YV+P E + GY+++ D + A P L+ I ++
Sbjct: 820 SESTAIIRWQPPDYVAPGLEVQ---GYRLQFGRKDVN-PLATLEFGP--QELEYSISNIH 873
Query: 175 PGKRYHMRVLAFSNGGDG 192
G Y +V A S G G
Sbjct: 874 RGATYIFKVSAKSKSGFG 891
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 46/197 (23%), Positives = 88/197 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ + +R + + V W+ E N G++ G+R+ Y+ D +++ +
Sbjct: 411 PASPPRNIQARIISQNTVLVRWD--EPDEPN--GQIKGYRV-YYTMDPTLPMSMWQIHNV 465
Query: 62 TRN-WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ I L Y ++V+A+ + G+GP S+ + + P +P + + ++ T
Sbjct: 466 QDSVLTTIQSLVTSETYTIRVLAFTSVGDGPFSDPIHVKVLQGVPGQPTN-FQVGEVSDT 524
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRY 179
V +TW P+FE+E II Y++ E +D P + +VD L P Y
Sbjct: 525 GVELTWE---PAFEKEGIISYELHYKE-GKDGPLGKKKFAPTSSF----VVDGLRPNTEY 576
Query: 180 HMRVLAFSNGGDGRMSS 196
+ A S+ G G ++
Sbjct: 577 FFSLAAVSSKGIGAFTN 593
>MGI|MGI:2444413 [details] [associations]
symbol:Sdk1 "sidekick homolog 1 (chicken)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:2444413 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101869 CTD:221935 HOGENOM:HOG000231052
HOVERGEN:HBG080083 OrthoDB:EOG4CNQQ4 OMA:YQISWEV EMBL:AY353236
EMBL:AK032883 EMBL:AK035225 EMBL:AK147578 EMBL:AK148648
EMBL:BC060237 IPI:IPI00420682 IPI:IPI00466076 RefSeq:NP_808547.3
UniGene:Mm.151931 UniGene:Mm.406697 ProteinModelPortal:Q3UH53
SMR:Q3UH53 STRING:Q3UH53 PhosphoSite:Q3UH53 PaxDb:Q3UH53
PRIDE:Q3UH53 Ensembl:ENSMUST00000074546 Ensembl:ENSMUST00000085774
GeneID:330222 KEGG:mmu:330222 UCSC:uc009ail.2 UCSC:uc009ain.2
InParanoid:Q3UH53 NextBio:399244 Bgee:Q3UH53 CleanEx:MM_SDK1
Genevestigator:Q3UH53 GermOnline:ENSMUSG00000039683 Uniprot:Q3UH53
Length = 2193
Score = 234 (87.4 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 58/198 (29%), Positives = 91/198 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP + R + T++ + W P+ + N +G+R+KYW+ D P +S
Sbjct: 1155 PDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSSALAQVVSDR 1214
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
I L+ T+Y +++ A+N G GP SE RT P P V + ++ T
Sbjct: 1215 LERELTIEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAPENVSAEAVSSTQ 1274
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
+ +TW V + I+GYKV D D ++ +T A + L Y +
Sbjct: 1275 ILLTWASVPEQDQNGLILGYKVLYCAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVVYEL 1333
Query: 182 RVLAFSNGGDGRMSSPAI 199
+VLAF+ G+G SSP I
Sbjct: 1334 QVLAFTRIGNGVPSSPLI 1351
Score = 213 (80.0 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 61/201 (30%), Positives = 86/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ + + G + +I V W P N G L G+ ++Y P E +S
Sbjct: 750 PSAPPKNIVASGRTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEHQQRNISSP 807
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N+ L+ L T+Y ++V AYN AG G S E T + P PP V + +N TT
Sbjct: 808 EVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTT 867
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKRYH 180
VH W F GYK+ W D + TI P + + I +L Y
Sbjct: 868 VHFLWNPPPQQFINGINQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYF 927
Query: 181 MRVLAFSNGGDGRMSSPAITF 201
VL F+ GDG SSP + +
Sbjct: 928 TSVLCFTTPGDGPPSSPQLVW 948
Score = 197 (74.4 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 58/187 (31%), Positives = 92/187 (49%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P +APQ V ++ + VTW+P +N G + G+++ YW+ D+ ET +
Sbjct: 1683 PAMAPQNVQVTPLTASQLEVTWDPPPPESQN--GNIQGYKVYYWEADSRNETEKMKVLFL 1740
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
I L TKY + + A+N AG+GP+S+ RT++ AP PPS + I TT
Sbjct: 1741 PEPVVKIKDLTSHTKYLISISAFNAAGDGPKSDPCQGRTHQAAPG-PPSFLAFSEITSTT 1799
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPV-GNTLD-ADIVDLSPGKR 178
++V+W PS + GY+V V+E + + + + V GN + DL+ G
Sbjct: 1800 LNVSWG--EPSAANGILQGYRV-VYEPLAPVQGVSKVVTVDVKGNWQRWLKVRDLTKGVT 1856
Query: 179 YHMRVLA 185
Y RV A
Sbjct: 1857 YFFRVQA 1863
Score = 171 (65.3 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 57/209 (27%), Positives = 98/209 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-NPEETAVYYLS 59
+P AP+ V + +ST I +TW + +N G ++G+++ Y +D +PE +
Sbjct: 1257 VPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKVLYCAKDLDPEPRSHVVRG 1314
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 118
T++ AL+ GL+ Y ++V+A+ G G P S LERT P PP + +
Sbjct: 1315 NHTQS-ALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPG-PPVRLVFPEVR 1372
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGK 177
T V + W+ P I+GY++ + + S T + VG T+ +L+P
Sbjct: 1373 LTAVRIVWQ--PPEEPNGVILGYQI-AYRLASG-SPHTFTTVEVGATVRQFTATELAPES 1428
Query: 178 RYHMRVLAFSNGGDGR-MSSPAITFQMGE 205
Y R+ A + G G + + IT + E
Sbjct: 1429 AYIFRLSAKTRQGWGEPLEATVITTEKRE 1457
Score = 165 (63.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 57/206 (27%), Positives = 94/206 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ V + NST ++ WNP ++ I G G+++ W D PE V ++
Sbjct: 850 VPTAPPQNVQAEAVNSTTVHFLWNPPP--QQFINGINQGYKLLAWPADAPETVTVVTIAP 907
Query: 61 TTR--NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--G 116
+ I L+ T Y+ V+ + G+GP S L T+ KP + H+
Sbjct: 908 DFHGIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSSPQLVWTHE---DKPGAVGHLSFTE 964
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTL-DADIVDLS 174
I T++ V+W+ P I+GY++ WEV ++ SR T+ +T+ + I LS
Sbjct: 965 ILDTSLKVSWQ--EPLERNGIIMGYQIS-WEVYGRNDSRLTHTL---NSTMHEYKIQGLS 1018
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAIT 200
Y + V A + G G +S I+
Sbjct: 1019 SLTTYTIDVAALTAAGVGVTTSSTIS 1044
Score = 132 (51.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 36/122 (29%), Positives = 52/122 (42%)
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y V + AYN GE P S AP P V + + + + VTW P +
Sbjct: 1654 RYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1713
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GYKV WE D ++ + + I DL+ +Y + + AF+ GDG S
Sbjct: 1714 GNIQGYKVYYWEADSRNETEKMKVLFLPEPV-VKIKDLTSHTKYLISISAFNAAGDGPKS 1772
Query: 196 SP 197
P
Sbjct: 1773 DP 1774
Score = 51 (23.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE 47
+P P V + ++++ + W P E++ G L G+RI Y++E
Sbjct: 1559 VPGEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRI-YYRE 1602
>UNIPROTKB|G3V8P4 [details] [associations]
symbol:Ptprf "Receptor-type tyrosine-protein phosphatase F"
species:10116 "Rattus norvegicus" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 RGD:3453
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:CH474008 OMA:FTPTIEA
ProteinModelPortal:G3V8P4 Ensembl:ENSRNOT00000027271 Uniprot:G3V8P4
Length = 1898
Score = 233 (87.1 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 62/207 (29%), Positives = 93/207 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V ST + V+W P N G + + + Y D + V +S
Sbjct: 606 PSAPPQKVTCVSTGSTTVRVSWVPPPADSRN--GIITQYSVAYEAVDGEDRKRHVVDGIS 663
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W L+ GL+ T+Y V V A+ + G GPES L RT P PP V ++ +N
Sbjct: 664 REHSSWDLL-GLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T VHV+W+ P+ + I GY+V ++ R I + + + I L+P
Sbjct: 723 TAVHVSWKLPVPNKQHGQIRGYQVTYVRLENGEPRGQPIIQDVMLAEAQETTISGLTPET 782
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 783 TYSITVAAYTTKGDGARSKPKVVTTTG 809
Score = 157 (60.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D+ + ++ T
Sbjct: 413 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDSRRPLSAWHKHNT 467
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P K + T
Sbjct: 468 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAKAESDT 526
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRY 179
+ ++W + P +E II Y++ W + + + T P + TL+ DL P Y
Sbjct: 527 RIQLSW-LLPP---QERIIKYELVYWAAEDEGQQHKVTFDPTSSYTLE----DLKPDTLY 578
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
H ++ A S+ G G + +P +
Sbjct: 579 HFQLAARSDLGVG-VFTPTV 597
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 50/137 (36%), Positives = 70/137 (51%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 376 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 435
Query: 128 YVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV----DLSPGKRYHMR 182
P E ++ GY+V + D SR + NT DA ++ L PG Y +R
Sbjct: 436 ---PPEEPNGLVRGYRV-YYTPD---SRRPLSAWHKHNT-DAGLLTTVGSLLPGITYSLR 487
Query: 183 VLAFSNGGDGRMSSPAI 199
VLAF+ GDG SP I
Sbjct: 488 VLAFTAVGDGP-PSPTI 503
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 49/182 (26%), Positives = 81/182 (44%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y+ ++ A ++ G G +
Sbjct: 539 RIIKYELVYWAAEDEGQQHKVTF--DPTSSYTL-EDLKPDTLYHFQLAARSDLGVGVFTP 595
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG-YKVRVWEVDQDMS 153
RT + P PP V TTV V+W P+ II Y V VD +
Sbjct: 596 TVEARTAQSTPSAPPQKVTCVSTGSTTVRVSW-VPPPADSRNGIITQYSVAYEAVDGE-D 653
Query: 154 RANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 212
R + + + D++ L Y + V A ++ G G SSP + + +++ SG
Sbjct: 654 RKRHVVDGISREHSSWDLLGLEKWTEYRVWVRAHTDVGPGPESSPVL---VRTDEDVPSG 710
Query: 213 SP 214
P
Sbjct: 711 PP 712
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 50/204 (24%), Positives = 86/204 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPE---ETAVY 56
+P P+ V NSTA++V+W P+ G++ G+++ Y + +N E + +
Sbjct: 707 VPSGPPRKVEVEPLNSTAVHVSWKLPVP---NKQHGQIRGYQVTYVRLENGEPRGQPIIQ 763
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
+ I GL P+T Y + V AY G+G S+ + T P +P V
Sbjct: 764 DVMLAEAQETTISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPTMMVSTTA 823
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
++ T + W P ++GY+++ D+ +R N TI + + L G
Sbjct: 824 MH--TALLQWH--PPKELPGELLGYRLQYRRADE--ARPN-TIDFGKDDQHFTVTGLHKG 876
Query: 177 KRYHMRVLAFSNGGDGRMSSPAIT 200
Y R+ A + G G IT
Sbjct: 877 ATYIFRLAAKNRAGPGEEFEKEIT 900
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 47/194 (24%), Positives = 88/194 (45%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
TA+ + W+P + + G L+G+R++Y + D + + + +++ + GL
Sbjct: 826 TAL-LQWHP----PKELPGELLGYRLQYRRADEARPNTIDF-GKDDQHFT-VTGLHKGAT 878
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 136
Y ++ A N AG G E E+ + T AP P + + G+ +T + W +
Sbjct: 879 YIFRLAAKNRAGPGEEFEKEIT-TPEDAPSGFPQNLRVTGLTTSTTELAWDPPVLAERNG 937
Query: 137 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 196
I Y V +++ N T G+ + ++ L P Y ++V A ++ G G +S
Sbjct: 938 RITNYTVVYRDINSQHELQNVT----GD-VHLTLLGLKPDTTYDIKVRAHTSKGAGPLS- 991
Query: 197 PAITFQ-MGEEKEF 209
P+I Q M E+ F
Sbjct: 992 PSIQSQTMPMEQVF 1005
>MGI|MGI:102695 [details] [associations]
symbol:Ptprf "protein tyrosine phosphatase, receptor type, F"
species:10090 "Mus musculus" [GO:0001960 "negative regulation of
cytokine-mediated signaling pathway" evidence=ISO] [GO:0004721
"phosphoprotein phosphatase activity" evidence=IEA] [GO:0004725
"protein tyrosine phosphatase activity" evidence=ISO] [GO:0005001
"transmembrane receptor protein tyrosine phosphatase activity"
evidence=ISO] [GO:0005158 "insulin receptor binding" evidence=ISO]
[GO:0005768 "endosome" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006470 "protein dephosphorylation" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=ISO] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016791 "phosphatase activity" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISO] [GO:0031345 "negative
regulation of cell projection organization" evidence=ISO]
[GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=ISO]
[GO:0042059 "negative regulation of epidermal growth factor
receptor signaling pathway" evidence=ISO] [GO:0042301 "phosphate
ion binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043525 "positive regulation of neuron
apoptotic process" evidence=ISO] [GO:0046627 "negative regulation
of insulin receptor signaling pathway" evidence=ISO] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=ISO]
[GO:0050803 "regulation of synapse structure and activity"
evidence=ISO] [GO:0051387 "negative regulation of neurotrophin TRK
receptor signaling pathway" evidence=ISO] [GO:0060076 "excitatory
synapse" evidence=ISO] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 MGI:MGI:102695 GO:GO:0016021
GO:GO:0005886 GO:GO:0008285 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043525 GO:GO:0043025 GO:GO:0005768 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0050803 GO:GO:0008201 GO:GO:0030426 GO:GO:0050775
GO:GO:0004725 GO:GO:0051387 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007156 GO:GO:0046627 GO:GO:0042059 GO:GO:0060076
GO:GO:0001960 GO:GO:0042301 eggNOG:COG5599 GO:GO:0031345
EMBL:AL626764 HOGENOM:HOG000010250 KO:K05695 GO:GO:0005001
GeneTree:ENSGT00590000082937 OrthoDB:EOG4BG8V3 CTD:5792 OMA:FTPTIEA
EMBL:AF300943 EMBL:AL807774 EMBL:BC057166 IPI:IPI00110264
RefSeq:NP_035343.2 UniGene:Mm.29855 PDB:3PXH PDBsum:3PXH
ProteinModelPortal:A2A8L5 SMR:A2A8L5 IntAct:A2A8L5 STRING:A2A8L5
PhosphoSite:A2A8L5 PaxDb:A2A8L5 PRIDE:A2A8L5
Ensembl:ENSMUST00000049074 GeneID:19268 KEGG:mmu:19268
UCSC:uc008ujq.1 InParanoid:A2A8L5 NextBio:296150 Bgee:A2A8L5
Genevestigator:A2A8L5 Uniprot:A2A8L5
Length = 1898
Score = 233 (87.1 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 62/207 (29%), Positives = 93/207 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V ST + V+W P N G + + + Y D + V +S
Sbjct: 606 PSAPPQKVTCVSTGSTTVRVSWVPPPADSRN--GIITQYSVAYEAVDGEDRKRHVVDGIS 663
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W L+ GL+ T+Y V V A+ + G GPES L RT P PP V ++ +N
Sbjct: 664 REHSSWDLL-GLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T VHV+W+ P+ + I GY+V ++ R I + + + I L+P
Sbjct: 723 TAVHVSWKLPVPNKQHGQIRGYQVTYVRLENGEPRGQPIIQDVMLAEAQETTISGLTPET 782
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 783 TYSITVAAYTTKGDGARSKPKVVTTTG 809
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 50/137 (36%), Positives = 70/137 (51%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 376 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 435
Query: 128 YVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV----DLSPGKRYHMR 182
P E ++ GY+V + D SR + NT DA ++ L PG Y +R
Sbjct: 436 ---PPEEPNGLVRGYRV-YYTPD---SRRPLSAWHKHNT-DAGLLTTVGSLLPGITYSLR 487
Query: 183 VLAFSNGGDGRMSSPAI 199
VLAF+ GDG SP I
Sbjct: 488 VLAFTAVGDGP-PSPTI 503
Score = 151 (58.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 50/200 (25%), Positives = 92/200 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D+ + ++ T
Sbjct: 413 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDSRRPLSAWHKHNT 467
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P + T
Sbjct: 468 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQANAESDT 526
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRY 179
+ ++W + P +E I+ Y++ W + + + T P + TL+ DL P Y
Sbjct: 527 RIQLSW-LLPP---QERIVKYELVYWAAEDEGQQHKVTFDPTSSYTLE----DLKPDTLY 578
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
H ++ A S+ G G + +P +
Sbjct: 579 HFQLAARSDLGVG-VFTPTV 597
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 50/204 (24%), Positives = 86/204 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPE---ETAVY 56
+P P+ V NSTA++V+W P+ G++ G+++ Y + +N E + +
Sbjct: 707 VPSGPPRKVEVEPLNSTAVHVSWKLPVP---NKQHGQIRGYQVTYVRLENGEPRGQPIIQ 763
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
+ I GL P+T Y + V AY G+G S+ + T P +P V
Sbjct: 764 DVMLAEAQETTISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPTMMVSTTA 823
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
++ T + W P ++GY+++ D+ +R N TI + + L G
Sbjct: 824 MH--TALLQWH--PPKELPGELLGYRLQYRRADE--ARPN-TIDFGKDDQHFTVTGLHKG 876
Query: 177 KRYHMRVLAFSNGGDGRMSSPAIT 200
Y R+ A + G G IT
Sbjct: 877 ATYVFRLAAKNRAGPGEEFEKEIT 900
Score = 135 (52.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 48/182 (26%), Positives = 81/182 (44%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R++ + + YW ED ++ V + T ++ L L+PDT Y+ ++ A ++ G G +
Sbjct: 539 RIVKYELVYWAAEDEGQQHKVTF--DPTSSYTL-EDLKPDTLYHFQLAARSDLGVGVFTP 595
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG-YKVRVWEVDQDMS 153
RT + P PP V TTV V+W P+ II Y V VD +
Sbjct: 596 TVEARTAQSTPSAPPQKVTCVSTGSTTVRVSW-VPPPADSRNGIITQYSVAYEAVDGE-D 653
Query: 154 RANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 212
R + + + D++ L Y + V A ++ G G SSP + + +++ SG
Sbjct: 654 RKRHVVDGISREHSSWDLLGLEKWTEYRVWVRAHTDVGPGPESSPVL---VRTDEDVPSG 710
Query: 213 SP 214
P
Sbjct: 711 PP 712
Score = 135 (52.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 43/183 (23%), Positives = 82/183 (44%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
TA+ + W+P + + G L+G+R++Y + D + + + +++ + GL
Sbjct: 826 TAL-LQWHP----PKELPGELLGYRLQYRRADEARPNTIDF-GKDDQHFT-VTGLHKGAT 878
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 136
Y ++ A N AG G E E+ + T P P + + G+ +T +TW +
Sbjct: 879 YVFRLAAKNRAGPGEEFEKEIT-TPEDVPSGFPQNLRVTGLTTSTTELTWDPPVLAERNG 937
Query: 137 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 196
I Y V +++ + N T N ++ L P Y ++V A ++ G G +S
Sbjct: 938 HITNYTVVYRDINSQLELQNVT-----NDTHLTLLGLKPDTTYDIKVRAHTSKGAGPLS- 991
Query: 197 PAI 199
P+I
Sbjct: 992 PSI 994
>RGD|3453 [details] [associations]
symbol:Ptprf "protein tyrosine phosphatase, receptor type, F"
species:10116 "Rattus norvegicus" [GO:0001960 "negative regulation of
cytokine-mediated signaling pathway" evidence=IMP] [GO:0004725
"protein tyrosine phosphatase activity" evidence=ISO;ISS;IDA]
[GO:0005001 "transmembrane receptor protein tyrosine phosphatase
activity" evidence=IDA] [GO:0005158 "insulin receptor binding"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=IDA] [GO:0007156 "homophilic cell
adhesion" evidence=IDA] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0008201 "heparin binding" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030426 "growth cone" evidence=IDA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IPI] [GO:0031345
"negative regulation of cell projection organization" evidence=IMP]
[GO:0035335 "peptidyl-tyrosine dephosphorylation"
evidence=ISO;ISS;IDA] [GO:0042059 "negative regulation of epidermal
growth factor receptor signaling pathway" evidence=IMP] [GO:0042301
"phosphate ion binding" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=IMP] [GO:0046627 "negative regulation of insulin receptor
signaling pathway" evidence=IMP] [GO:0050775 "positive regulation of
dendrite morphogenesis" evidence=IMP] [GO:0050803 "regulation of
synapse structure and activity" evidence=IMP] [GO:0051387 "negative
regulation of neurotrophin TRK receptor signaling pathway"
evidence=IMP] [GO:0060076 "excitatory synapse" evidence=IDA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 SMART:SM00194 RGD:3453
GO:GO:0016021 GO:GO:0005886 GO:GO:0008285 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0043525 GO:GO:0043025 GO:GO:0005768
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0050803 GO:GO:0008201 GO:GO:0030426 GO:GO:0050775
GO:GO:0051387 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0046627 GO:GO:0042059 GO:GO:0060076 GO:GO:0001960 GO:GO:0042301
eggNOG:COG5599 GO:GO:0005158 GO:GO:0031345 HOGENOM:HOG000010250
KO:K05695 GO:GO:0005001 OrthoDB:EOG4BG8V3 CTD:5792 EMBL:L11586
EMBL:M60103 IPI:IPI00231988 PIR:S46216 RefSeq:NP_062122.1
UniGene:Rn.11386 HSSP:P10586 ProteinModelPortal:Q64604 SMR:Q64604
STRING:Q64604 PRIDE:Q64604 GeneID:360406 KEGG:rno:360406
UCSC:RGD:3453 InParanoid:Q64604 BindingDB:Q64604 ChEMBL:CHEMBL2834
NextBio:672799 ArrayExpress:Q64604 Genevestigator:Q64604
Uniprot:Q64604
Length = 1898
Score = 233 (87.1 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 62/207 (29%), Positives = 93/207 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V ST + V+W P N G + + + Y D + V +S
Sbjct: 606 PSAPPQKVTCVSTGSTTVRVSWVPPPADSRN--GIITQYSVAYEAVDGEDRKRHVVDGIS 663
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W L+ GL+ T+Y V V A+ + G GPES L RT P PP V ++ +N
Sbjct: 664 REHSSWDLL-GLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T VHV+W+ P+ + I GY+V ++ R I + + + I L+P
Sbjct: 723 TAVHVSWKLPVPNKQHGQIRGYQVTYVRLENGEPRGQPIIQDVMLAEAQETTISGLTPET 782
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 783 TYSITVAAYTTKGDGARSKPKVVTTTG 809
Score = 157 (60.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D+ + ++ T
Sbjct: 413 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDSRRPLSAWHKHNT 467
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P K + T
Sbjct: 468 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAKAESDT 526
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRY 179
+ ++W + P +E II Y++ W + + + T P + TL+ DL P Y
Sbjct: 527 RIQLSW-LLPP---QERIIKYELVYWAAEDEGQQHKVTFDPTSSYTLE----DLKPDTLY 578
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
H ++ A S+ G G + +P +
Sbjct: 579 HFQLAARSDLGVG-VFTPTV 597
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 50/137 (36%), Positives = 70/137 (51%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 376 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 435
Query: 128 YVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV----DLSPGKRYHMR 182
P E ++ GY+V + D SR + NT DA ++ L PG Y +R
Sbjct: 436 ---PPEEPNGLVRGYRV-YYTPD---SRRPLSAWHKHNT-DAGLLTTVGSLLPGITYSLR 487
Query: 183 VLAFSNGGDGRMSSPAI 199
VLAF+ GDG SP I
Sbjct: 488 VLAFTAVGDGP-PSPTI 503
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 50/204 (24%), Positives = 86/204 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPE---ETAVY 56
+P P+ V NSTA++V+W P+ G++ G+++ Y + +N E + +
Sbjct: 707 VPSGPPRKVEVEPLNSTAVHVSWKLPVP---NKQHGQIRGYQVTYVRLENGEPRGQPIIQ 763
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
+ I GL P+T Y + V AY G+G S+ + T P +P V
Sbjct: 764 DVMLAEAQETTISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPTMMVSTTA 823
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
++ T + W P ++GY+++ D+ +R N TI + + L G
Sbjct: 824 MH--TALLQWH--PPKELPGELLGYRLQYRRADE--ARPN-TIDFGKDDQHFTVTGLHKG 876
Query: 177 KRYHMRVLAFSNGGDGRMSSPAIT 200
Y R+ A + G G IT
Sbjct: 877 ATYIFRLAAKNRAGPGEEFEKEIT 900
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 48/182 (26%), Positives = 80/182 (43%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y+ ++ A ++ G G +
Sbjct: 539 RIIKYELVYWAAEDEGQQHKVTF--DPTSSYTL-EDLKPDTLYHFQLAARSDLGVGVFTP 595
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG-YKVRVWEVDQDMS 153
T + P PP V TTV V+W P+ II Y V VD +
Sbjct: 596 TVEACTAQSTPSAPPQKVTCVSTGSTTVRVSW-VPPPADSRNGIITQYSVAYEAVDGE-D 653
Query: 154 RANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 212
R + + + D++ L Y + V A ++ G G SSP + + +++ SG
Sbjct: 654 RKRHVVDGISREHSSWDLLGLEKWTEYRVWVRAHTDVGPGPESSPVL---VRTDEDVPSG 710
Query: 213 SP 214
P
Sbjct: 711 PP 712
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 43/183 (23%), Positives = 83/183 (45%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
TA+ + W+P + + G L+G+R++Y + D + + + +++ + GL
Sbjct: 826 TAL-LQWHP----PKELPGELLGYRLQYRRADEARPNTIDF-GKDDQHFT-VTGLHKGAT 878
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 136
Y ++ A N AG G E E+ + T AP P + + G+ +T + W +
Sbjct: 879 YIFRLAAKNRAGPGEEFEKEIT-TPEDAPSGFPQNLRVTGLTTSTTELAWDPPVLAERNG 937
Query: 137 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 196
I Y V +++ N T G+ + ++ L P Y ++V A ++ G G +S
Sbjct: 938 RITNYTVVYRDINSQHELQNVT----GD-VHLTLLGLKPDTTYDIKVRAHTSKGAGPLS- 991
Query: 197 PAI 199
P+I
Sbjct: 992 PSI 994
>RGD|621302 [details] [associations]
symbol:Cntn5 "contactin 5" species:10116 "Rattus norvegicus"
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:621302 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047 eggNOG:NOG293951
CTD:53942 KO:K06763 EMBL:D87212 IPI:IPI00205420 RefSeq:NP_446198.1
UniGene:Rn.10643 ProteinModelPortal:P97527 STRING:P97527
PRIDE:P97527 GeneID:114589 KEGG:rno:114589 UCSC:RGD:621302
NextBio:618737 Genevestigator:P97527 Uniprot:P97527
Length = 1099
Score = 230 (86.0 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 61/195 (31%), Positives = 92/195 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + + + I V W + +E++ GR G I YWK+ PE++A +R
Sbjct: 875 PTAAPTDVTATSVSVSEIFVVWKHV---KESL-GRPQGFEIGYWKDTEPEDSAETVRTRG 930
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ GL+ DT Y++ V AYN AG GP S T R P +PP + + +
Sbjct: 931 NESFVMLTGLEGDTLYHLTVRAYNGAGYGPPSREVSATTKRHPPSEPPGNLRWEQ-QGSQ 989
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V + W V P E ++GYKV + + +T P +V L Y +
Sbjct: 990 VSLGWEPVRPLANESEVMGYKVFYRQEGHSKGQVIETQKPQA------VVPLPEAGVYII 1043
Query: 182 RVLAFSNGGDGRMSS 196
V A+S GGDG SS
Sbjct: 1044 EVRAYSEGGDGTASS 1058
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 46/198 (23%), Positives = 83/198 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG--RLIGHR---IKYWKEDNPEET-A 54
+P+ AP V + + W P+ +N G ++ R + WKE + A
Sbjct: 772 VPKTAPSNVSGGSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDA 831
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ R + P T + VKV YNN G+GP S+ + + P P+ V
Sbjct: 832 SKFIYRDE-------SVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTA 884
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
++ + + V W++V S G+++ W+ D + + +T+ GN + L
Sbjct: 885 TSVSVSEIFVVWKHVKESLGRPQ--GFEIGYWK-DTEPEDSAETVRTRGNESFVMLTGLE 941
Query: 175 PGKRYHMRVLAFSNGGDG 192
YH+ V A++ G G
Sbjct: 942 GDTLYHLTVRAYNGAGYG 959
>UNIPROTKB|Q9UQ52 [details] [associations]
symbol:CNTN6 "Contactin-6" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005886 Reactome:REACT_111045 GO:GO:0007411
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007219 GO:GO:0007417 InterPro:IPR013098
Pfam:PF07679 HOVERGEN:HBG051047 eggNOG:NOG293951
HOGENOM:HOG000059617 EMBL:AB003592 EMBL:BC113118 IPI:IPI00004433
RefSeq:NP_055276.1 UniGene:Hs.387300 ProteinModelPortal:Q9UQ52
SMR:Q9UQ52 STRING:Q9UQ52 PhosphoSite:Q9UQ52 DMDM:55976622
PaxDb:Q9UQ52 PRIDE:Q9UQ52 Ensembl:ENST00000350110
Ensembl:ENST00000446702 GeneID:27255 KEGG:hsa:27255 UCSC:uc003boz.3
CTD:27255 GeneCards:GC03P001109 HGNC:HGNC:2176 HPA:HPA016645
MIM:607220 neXtProt:NX_Q9UQ52 PharmGKB:PA26690 InParanoid:Q9UQ52
KO:K06764 OMA:CLNWEHV OrthoDB:EOG4PNXG6 PhylomeDB:Q9UQ52
GenomeRNAi:27255 NextBio:50198 ArrayExpress:Q9UQ52 Bgee:Q9UQ52
CleanEx:HS_CNTN6 Genevestigator:Q9UQ52 GermOnline:ENSG00000134115
Uniprot:Q9UQ52
Length = 1028
Score = 228 (85.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 62/198 (31%), Positives = 101/198 (51%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET-AVYYLSR 60
PQ+AP+G + F+++ + V+WN I R GR++G+ + YW +D+ E +S
Sbjct: 802 PQLAPRGTSLQSFSASEMEVSWNAIAWNRNT--GRVLGYEVLYWTDDSKESMIGKIRVSG 859
Query: 61 --TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
TT+N I GL+ +T Y+ V AYN AG GP S T + P +PP+ + K N
Sbjct: 860 NVTTKN---ITGLKANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTN 916
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
+ + + W +V E ++GYK+ + Q + I+ NT A++ L P +
Sbjct: 917 -SKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTH----ILETNNT-SAEL--LVPFEE 968
Query: 179 -YHMRVLAFSNGGDGRMS 195
Y + + S+GGDG S
Sbjct: 969 DYLIEIRTVSDGGDGSSS 986
Score = 148 (57.2 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 51/199 (25%), Positives = 81/199 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN--PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 58
+P VAP + G + + + +TW P EL G +I R + E+ +
Sbjct: 699 VPVVAPVNIHGGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVES 758
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
SR I+ L P + VKV YNN GEG S + + PQ P ++ +
Sbjct: 759 SRFVYRNESIIPLSP---FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFS 815
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
+ + V+W ++ + ++GY+V W D S + GN +I L
Sbjct: 816 ASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTI 874
Query: 179 YHMRVLAFSNGGDGRMSSP 197
Y V A++ G G S P
Sbjct: 875 YFASVRAYNTAGTGPSSPP 893
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 51/210 (24%), Positives = 88/210 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +ST ++W I+ I R + T L+
Sbjct: 597 PPGPPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGK 656
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE-RYLERTYRKAPQKPPSAVHIKGINPT 120
T N A +VGL P +Y +V+A N+ G G SE L RT P P +H G + +
Sbjct: 657 TYN-ATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRS 715
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM-SRANDTIIPVGNTL--DADIVDLSPGK 177
+ +TW + + GY + V S+ + + + + I+ LSP
Sbjct: 716 ELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRFVYRNESIIPLSP-- 773
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEK 207
+ ++V ++N G+G +S+ I + GE++
Sbjct: 774 -FEVKVGVYNNEGEGSLSTVTIVYS-GEDE 801
>MGI|MGI:1858223 [details] [associations]
symbol:Cntn6 "contactin 6" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:1858223 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0007219 Reactome:REACT_127416 InterPro:IPR013098 Pfam:PF07679
HOVERGEN:HBG051047 eggNOG:NOG293951 HOGENOM:HOG000059617
GeneTree:ENSGT00550000074380 CTD:27255 KO:K06764 OMA:CLNWEHV
OrthoDB:EOG4PNXG6 EMBL:AB032602 EMBL:AK052972 EMBL:BC076594
IPI:IPI00312433 IPI:IPI00480564 RefSeq:NP_059079.2
UniGene:Mm.321671 ProteinModelPortal:Q9JMB8 SMR:Q9JMB8
MINT:MINT-6439843 STRING:Q9JMB8 PhosphoSite:Q9JMB8 PRIDE:Q9JMB8
Ensembl:ENSMUST00000089215 Ensembl:ENSMUST00000162872 GeneID:53870
KEGG:mmu:53870 UCSC:uc009dco.1 InParanoid:Q9JMB8 NextBio:310721
Bgee:Q9JMB8 CleanEx:MM_CNTN6 Genevestigator:Q9JMB8
GermOnline:ENSMUSG00000030092 Uniprot:Q9JMB8
Length = 1028
Score = 227 (85.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 61/199 (30%), Positives = 104/199 (52%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--- 58
PQ+AP+G + F+++ + V+WN I R GR++G+ + YW DN +E+ + +
Sbjct: 802 PQLAPRGTSVQSFSASEMEVSWNAIAWNRNT--GRVLGYEVLYWT-DNSKESMIGKIRVS 858
Query: 59 -SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ TT+N I GL+ +T Y+ V AYN AG GP S T + P +PP+ + K +
Sbjct: 859 GNVTTKN---ITGLRANTIYFASVRAYNTAGTGPSSLPVNVTTKKSPPSQPPANIAWK-L 914
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
+ + + + W +V E ++GYK+ + Q + I+ NT A++ L P +
Sbjct: 915 SNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTH----ILETNNT-SAEL--LVPFE 967
Query: 178 R-YHMRVLAFSNGGDGRMS 195
Y + + S+GGDG S
Sbjct: 968 EDYLIEIRTVSDGGDGSSS 986
Score = 141 (54.7 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 49/203 (24%), Positives = 82/203 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS 59
+P VAP + G + + + +TW E I E ++ G G+ + + P T +
Sbjct: 699 VPNVAPGNINGGGGSRSELVITW---EAIPEELQNGEGFGYIVMF----RPVGTTAWMKE 751
Query: 60 RTT--RNWALIV---GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
R + I + P + + VKV YNN GEG S + + PQ P +
Sbjct: 752 RVALVESSKFIYRNESIMPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSV 811
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
+ + + + V+W ++ + ++GY+V W D I GN +I L
Sbjct: 812 QSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKNITGLR 870
Query: 175 PGKRYHMRVLAFSNGGDGRMSSP 197
Y V A++ G G S P
Sbjct: 871 ANTIYFASVRAYNTAGTGPSSLP 893
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 51/210 (24%), Positives = 87/210 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +ST ++W P I+ I R + T L+
Sbjct: 597 PPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQ 656
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPT 120
T N A +VGL P +Y +V+A NN G G P L RT P P ++ G + +
Sbjct: 657 TYN-ATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRS 715
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM-SRANDTIIPVGNTL--DADIVDLSPGK 177
+ +TW + + GY V V + ++ + + I+ LSP
Sbjct: 716 ELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKFIYRNESIMPLSP-- 773
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEK 207
+ ++V ++N G+G +S+ I + GE++
Sbjct: 774 -FEVKVGVYNNEGEGSLSTVTIVYS-GEDE 801
>MGI|MGI:104518 [details] [associations]
symbol:Cntn2 "contactin 2" species:10090 "Mus musculus"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0001948
"glycoprotein binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=IGI;IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0007612 "learning" evidence=IMP]
[GO:0007628 "adult walking behavior" evidence=IMP] [GO:0008076
"voltage-gated potassium channel complex" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0010769 "regulation of cell
morphogenesis involved in differentiation" evidence=IMP]
[GO:0010954 "positive regulation of protein processing"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0021853
"cerebral cortex GABAergic interneuron migration" evidence=IMP]
[GO:0022010 "central nervous system myelination" evidence=IMP]
[GO:0030246 "carbohydrate binding" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0031133 "regulation of axon diameter"
evidence=IMP] [GO:0031175 "neuron projection development"
evidence=IGI] [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0031623 "receptor internalization" evidence=IDA] [GO:0033268
"node of Ranvier" evidence=IDA] [GO:0034613 "cellular protein
localization" evidence=IMP] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043209 "myelin sheath" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0044224 "juxtaparanode region
of axon" evidence=IDA] [GO:0045163 "clustering of voltage-gated
potassium channels" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI] [GO:0048168 "regulation of neuronal
synaptic plasticity" evidence=IMP] [GO:0048710 "regulation of
astrocyte differentiation" evidence=IMP] [GO:0060168 "positive
regulation of adenosine receptor signaling pathway" evidence=IMP]
[GO:0071205 "protein localization to juxtaparanode region of axon"
evidence=IGI;IMP] [GO:0071206 "establishment of protein
localization to juxtaparanode region of axon" evidence=IDA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:104518 GO:GO:0005886
GO:GO:0007411 GO:GO:0001764 GO:GO:0009986 GO:GO:0000226
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043025 GO:GO:0007612
GO:GO:0031225 GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0045665
GO:GO:0031623 GO:GO:0022010 GO:GO:0007160 GO:GO:0010954
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007413 GO:GO:0033268
GO:GO:0048168 GO:GO:0007628 GO:GO:0021853 GO:GO:0043209
GO:GO:0044456 HOVERGEN:HBG051047 eggNOG:NOG293951
HOGENOM:HOG000059617 GeneTree:ENSGT00550000074380 GO:GO:0001948
CTD:6900 KO:K06760 OrthoDB:EOG490786 OMA:ECFAFGN GO:GO:0044224
GO:GO:0045163 GO:GO:0071206 GO:GO:0060168 GO:GO:0048710
GO:GO:0031133 EMBL:BC066106 EMBL:BC053033 EMBL:X81365
IPI:IPI00119970 RefSeq:NP_796103.2 UniGene:Mm.485420
ProteinModelPortal:Q61330 SMR:Q61330 IntAct:Q61330 STRING:Q61330
PhosphoSite:Q61330 PaxDb:Q61330 PRIDE:Q61330
Ensembl:ENSMUST00000086521 GeneID:21367 KEGG:mmu:21367
UCSC:uc007cpa.1 InParanoid:Q61330 NextBio:300578 Bgee:Q61330
CleanEx:MM_CNTN2 Genevestigator:Q61330
GermOnline:ENSMUSG00000053024 Uniprot:Q61330
Length = 1040
Score = 227 (85.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/142 (33%), Positives = 80/142 (56%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+VAP V+++G +S+ +NV+W P+ +++ G L+G+ I+YWK + E A +
Sbjct: 814 PKVAPAKVWAKGSSSSEMNVSWEPV---LQDMNGILLGYEIRYWKAGDKEAAADRVRTAG 870
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ A + GL P+TKY+V V AYN AG GP S T + P++PP + + ++
Sbjct: 871 LDSSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTMKPPPRRPPGNISWT-FSSSS 929
Query: 122 VHVTWRYVSPSFEEEPIIGYKV 143
+ + W V P E + GYK+
Sbjct: 930 LSLKWDPVVPLRNESTVTGYKM 951
Score = 201 (75.8 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 52/204 (25%), Positives = 91/204 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P VAP G+ G + + W P+ RE G G+ + + ++ +
Sbjct: 711 VPSVAPSGLSGGGGAPGELTINWTPMS--REYQNGDGFGYLLSFRRQGSSSWQTARVPGA 768
Query: 61 TTRNWALIV-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
T+ + + P T + VK+ +YN G+GPES + + + P+ P+ V KG +
Sbjct: 769 DTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAKGSSS 828
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ ++V+W V ++GY++R W+ D A D + G A + L P +Y
Sbjct: 829 SEMNVSWEPVLQDMNGI-LLGYEIRYWKAG-DKEAAADRVRTAGLDSSARVTGLYPNTKY 886
Query: 180 HMRVLAFSNGGDGRMSSPAITFQM 203
H+ V A++ G G S A M
Sbjct: 887 HVTVRAYNRAGTGPASPSADAMTM 910
>UNIPROTKB|F1MJR2 [details] [associations]
symbol:PTPRD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 OMA:GYYIVIV EMBL:DAAA02022619
IPI:IPI00722623 Ensembl:ENSBTAT00000013433 Uniprot:F1MJR2
Length = 1776
Score = 229 (85.7 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 63/209 (30%), Positives = 100/209 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW----KEDNPEETAVYY 57
P PQ + +ST+I V+W P + ++N G + + IKY ++D P E +
Sbjct: 481 PSAPPQDISCTSPSSTSILVSWQPPPVDKQN--GIITEYSIKYTAVDGEDDKPHEI-LGI 537
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +
Sbjct: 538 PSDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAV 595
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSP 175
N T+V V+WR P+ + I GY+V ++ R + + + + D I L P
Sbjct: 596 NSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPRGQPMLKDVMLADAQDMIISGLQP 655
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 656 ETSYSLTVTAYTTKGDGARSKPKLVSTTG 684
Score = 187 (70.9 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 208 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEEPYKEIDGV----ATTRY--SVAGLSPYS 259
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 260 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 317
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 318 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 376
Query: 196 S 196
S
Sbjct: 377 S 377
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NST++ V+W +P+ G++ G+++ Y + +N E L
Sbjct: 582 VPSGPPRKVEVEAVNSTSVKVSWRSPVP---NKQHGQIRGYQVHYVRMENGEPRGQPMLK 638
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A +I GLQP+T Y + V AY G+G S+ L T P +P ++
Sbjct: 639 DVMLADAQDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGRPRLVINHTQ 698
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 149
+N T + W +F P+ GY+++ D
Sbjct: 699 MN--TALIQWHPPVDTFG--PLQGYRLKFGRKD 727
Score = 126 (49.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 50/192 (26%), Positives = 80/192 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST+ ++W P L N G + + + Y ++ N V L
Sbjct: 780 VPTGFPQNLQSEGTTSTSTQLSWQPPVLAERN--GIITKYTLLY-RDINIPLLPVEQLIV 836
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+PDT Y VKV A+ + G GP S RT H+K + T
Sbjct: 837 PADTTLTLSGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVNQAVFAKNFHVKAVMKT 896
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K+ +++ D M D G IV+L P K Y
Sbjct: 897 SVLLSWE-IPENYNSA--MPFKI-LYD-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 946
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 947 FVLTNRGNSAGG 958
>UNIPROTKB|P28685 [details] [associations]
symbol:CNTN2 "Contactin-2" species:9031 "Gallus gallus"
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0007158
"neuron cell-cell adhesion" evidence=IDA] [GO:0050839 "cell
adhesion molecule binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=TAS] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031225
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 Reactome:REACT_115433 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007158 HOVERGEN:HBG051047 eggNOG:NOG293951
HOGENOM:HOG000059617 EMBL:X63101 EMBL:X79607 IPI:IPI00580259
PIR:S22383 RefSeq:NP_001004395.1 UniGene:Gga.2766 PDB:1CS6
PDBsum:1CS6 ProteinModelPortal:P28685 SMR:P28685 STRING:P28685
GeneID:419825 KEGG:gga:419825 CTD:6900 KO:K06760 OrthoDB:EOG490786
EvolutionaryTrace:P28685 NextBio:20822823 Uniprot:P28685
Length = 1036
Score = 226 (84.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 59/191 (30%), Positives = 97/191 (50%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+VAP V ++ S+ ++V+W P+E + ++ G L+G+ I+YWK+ + EE A +
Sbjct: 807 PKVAPFRVTAKAVLSSEMDVSWEPVE--QGDMTGVLLGYEIRYWKDGDKEEAADRVRTAG 864
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
A + GL P+TKY+V V AYN AG GP S T + P++PP + + +T
Sbjct: 865 LVTSAHVTGLNPNTKYHVSVRAYNRAGAGPPSPSTNITTTKPPPRRPPGNISWT-LTGST 923
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V + W V +E + GYK+ ++ QD A + + +D + + +
Sbjct: 924 VTIKWDPVVAQADESAVTGYKM-LYR--QDSHSAPTLYLASKSRIDIPVPEDFTHAFVQI 980
Query: 182 RVLAFSNGGDG 192
RV GGDG
Sbjct: 981 RVTG--PGGDG 989
Score = 201 (75.8 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 58/208 (27%), Positives = 94/208 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN--------PEET 53
P VAP G+ G + + W P +R+ G G+ + + K+ P
Sbjct: 705 PTVAPSGLGGGGGAPNELIINWTPT--LRDYQNGDGFGYILSFRKKGTQGWLTARVPHAE 762
Query: 54 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 113
+++Y+ R +G P T + VK+ AYN GEGPES + + + P+ P V
Sbjct: 763 SLHYVYRNES-----IG--PYTPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVT 815
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
K + + + V+W V ++GY++R W+ D D A D + G A + L
Sbjct: 816 AKAVLSSEMDVSWEPVEQGDMTGVLLGYEIRYWK-DGDKEEAADRVRTAGLVTSAHVTGL 874
Query: 174 SPGKRYHMRVLAFSNGGDGRMS-SPAIT 200
+P +YH+ V A++ G G S S IT
Sbjct: 875 NPNTKYHVSVRAYNRAGAGPPSPSTNIT 902
>RGD|3821 [details] [associations]
symbol:Cntn2 "contactin 2 (axonal)" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0001948 "glycoprotein binding" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007160 "cell-matrix adhesion"
evidence=IDA] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0007411
"axon guidance" evidence=IEA;ISO] [GO:0007413 "axonal fasciculation"
evidence=IEA;ISO] [GO:0007612 "learning" evidence=IEA;ISO]
[GO:0007628 "adult walking behavior" evidence=IEA;ISO] [GO:0008076
"voltage-gated potassium channel complex" evidence=IEA;ISO]
[GO:0009986 "cell surface" evidence=IEA;ISO;TAS] [GO:0010769
"regulation of cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0010954 "positive regulation of protein processing"
evidence=IEA;ISO] [GO:0021853 "cerebral cortex GABAergic interneuron
migration" evidence=IEA;ISO] [GO:0022010 "central nervous system
myelination" evidence=IEA;ISO] [GO:0030246 "carbohydrate binding"
evidence=IEA;ISO] [GO:0030424 "axon" evidence=ISO] [GO:0031133
"regulation of axon diameter" evidence=IEA;ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0031623 "receptor internalization"
evidence=IEA;ISO] [GO:0033268 "node of Ranvier" evidence=IEA;ISO]
[GO:0034613 "cellular protein localization" evidence=ISO] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IEA;ISO] [GO:0043209 "myelin sheath" evidence=IEA;ISO]
[GO:0043621 "protein self-association" evidence=IEA;ISO] [GO:0044224
"juxtaparanode region of axon" evidence=IEA;ISO] [GO:0045163
"clustering of voltage-gated potassium channels" evidence=IEA;ISO]
[GO:0045202 "synapse" evidence=IDA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0048168 "regulation
of neuronal synaptic plasticity" evidence=IEA;ISO] [GO:0048710
"regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0060168 "positive regulation of adenosine receptor signaling
pathway" evidence=IEA;ISO] [GO:0071205 "protein localization to
juxtaparanode region of axon" evidence=ISO] [GO:0071206
"establishment of protein localization to juxtaparanode region of
axon" evidence=IEA;ISO] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 RGD:3821
GO:GO:0005886 GO:GO:0007411 GO:GO:0001764 GO:GO:0009986 GO:GO:0000226
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0043025 GO:GO:0007612
GO:GO:0031225 GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0045665
GO:GO:0008076 GO:GO:0031623 GO:GO:0007409 GO:GO:0022010 GO:GO:0007160
GO:GO:0010954 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007413
GO:GO:0033268 GO:GO:0048168 GO:GO:0007628 GO:GO:0021853 GO:GO:0043209
GO:GO:0044456 HOVERGEN:HBG051047 eggNOG:NOG293951
HOGENOM:HOG000059617 CTD:6900 KO:K06760 OrthoDB:EOG490786
GO:GO:0044224 GO:GO:0045163 GO:GO:0071206 GO:GO:0060168 GO:GO:0048710
GO:GO:0031133 EMBL:M31725 IPI:IPI00203132 PIR:A34695
RefSeq:NP_037016.1 UniGene:Rn.89910 ProteinModelPortal:P22063
SMR:P22063 STRING:P22063 PRIDE:P22063 GeneID:25356 KEGG:rno:25356
UCSC:RGD:3821 InParanoid:P22063 NextBio:606319 Genevestigator:P22063
GermOnline:ENSRNOG00000009033 Uniprot:P22063
Length = 1040
Score = 226 (84.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 48/142 (33%), Positives = 79/142 (55%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+VAP V+++G +S+ +NV+W P+ +++ G L+G+ I+YWK + E A +
Sbjct: 814 PRVAPAKVWAKGSSSSEMNVSWEPV---LQDMNGILLGYEIRYWKAGDNEAAADRVRTAG 870
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
A + GL P+TKY+V V AYN AG GP S T + P++PP + + ++
Sbjct: 871 LDTSARVTGLNPNTKYHVTVRAYNRAGTGPASPSADAMTVKPPPRRPPGNISWT-FSSSS 929
Query: 122 VHVTWRYVSPSFEEEPIIGYKV 143
+ + W V P E + GYK+
Sbjct: 930 LSLKWDPVVPLRNESTVTGYKM 951
Score = 204 (76.9 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 55/202 (27%), Positives = 96/202 (47%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE-ETAVYYLS 59
+P VAP G+ G + + W P+ RE G G+ + + ++ + +TA +
Sbjct: 711 VPSVAPSGLSGGGGAPGELIINWTPVS--REYQNGDGFGYLLSFRRQGSSSWQTA--RVP 766
Query: 60 RTTRNWALIVG---LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
+ + G +QP T + VK+ +YN G+GPES L + + P+ P+ V KG
Sbjct: 767 GADAQY-FVYGNDSIQPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKG 825
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
+ + ++V+W V ++GY++R W+ D A D + G A + L+P
Sbjct: 826 SSSSEMNVSWEPVLQDMNGI-LLGYEIRYWKAG-DNEAAADRVRTAGLDTSARVTGLNPN 883
Query: 177 KRYHMRVLAFSNGGDGRMSSPA 198
+YH+ V A++ G G S A
Sbjct: 884 TKYHVTVRAYNRAGTGPASPSA 905
>UNIPROTKB|F1NVC2 [details] [associations]
symbol:CNTN2 "Contactin-2" species:9031 "Gallus gallus"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001948
"glycoprotein binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007628 "adult walking
behavior" evidence=IEA] [GO:0008076 "voltage-gated potassium
channel complex" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0010954 "positive regulation of protein
processing" evidence=IEA] [GO:0021853 "cerebral cortex GABAergic
interneuron migration" evidence=IEA] [GO:0022010 "central nervous
system myelination" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0031133 "regulation of axon diameter"
evidence=IEA] [GO:0031623 "receptor internalization" evidence=IEA]
[GO:0033268 "node of Ranvier" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0043209 "myelin sheath" evidence=IEA]
[GO:0043621 "protein self-association" evidence=IEA] [GO:0044224
"juxtaparanode region of axon" evidence=IEA] [GO:0045163
"clustering of voltage-gated potassium channels" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0048168 "regulation of neuronal synaptic
plasticity" evidence=IEA] [GO:0048710 "regulation of astrocyte
differentiation" evidence=IEA] [GO:0060168 "positive regulation of
adenosine receptor signaling pathway" evidence=IEA] [GO:0071206
"establishment of protein localization to juxtaparanode region of
axon" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0009986 GO:GO:0000226 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043025 GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0008076
GO:GO:0031623 GO:GO:0010954 InterPro:IPR013098 Pfam:PF07679
GO:GO:0033268 GO:GO:0048168 GO:GO:0043209
GeneTree:ENSGT00550000074380 OMA:ECFAFGN GO:GO:0044224
GO:GO:0071206 GO:GO:0060168 EMBL:AADN02044911 EMBL:AADN02044912
IPI:IPI00684136 ProteinModelPortal:F1NVC2
Ensembl:ENSGALT00000035235 ArrayExpress:F1NVC2 GO:GO:0010769
Uniprot:F1NVC2
Length = 1041
Score = 226 (84.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 59/191 (30%), Positives = 97/191 (50%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+VAP V ++ S+ ++V+W P+E + ++ G L+G+ I+YWK+ + EE A +
Sbjct: 812 PKVAPFRVTAKAVLSSEMDVSWEPVE--QGDMTGVLLGYEIRYWKDGDKEEAADRVRTAG 869
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
A + GL P+TKY+V V AYN AG GP S T + P++PP + + +T
Sbjct: 870 LVTSAHVTGLNPNTKYHVSVRAYNRAGAGPPSPSTNITTTKPPPRRPPGNISWT-LTGST 928
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V + W V +E + GYK+ ++ QD A + + +D + + +
Sbjct: 929 VTIKWDPVVAQADESAVTGYKM-LYR--QDSHSAPTLYLASKSRIDIPVPEDFTHAFVQI 985
Query: 182 RVLAFSNGGDG 192
RV GGDG
Sbjct: 986 RVTG--PGGDG 994
Score = 201 (75.8 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 58/208 (27%), Positives = 94/208 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN--------PEET 53
P VAP G+ G + + W P +R+ G G+ + + K+ P
Sbjct: 710 PTVAPSGLGGGGGAPNELIINWTPT--LRDYQNGDGFGYILSFRKKGTQGWLTARVPHAE 767
Query: 54 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 113
+++Y+ R +G P T + VK+ AYN GEGPES + + + P+ P V
Sbjct: 768 SLHYVYRNES-----IG--PYTPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVT 820
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
K + + + V+W V ++GY++R W+ D D A D + G A + L
Sbjct: 821 AKAVLSSEMDVSWEPVEQGDMTGVLLGYEIRYWK-DGDKEEAADRVRTAGLVTSAHVTGL 879
Query: 174 SPGKRYHMRVLAFSNGGDGRMS-SPAIT 200
+P +YH+ V A++ G G S S IT
Sbjct: 880 NPNTKYHVSVRAYNRAGAGPPSPSTNIT 907
>UNIPROTKB|E2RE80 [details] [associations]
symbol:PTPRF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679 KO:K05695
GeneTree:ENSGT00590000082937 CTD:5792 EMBL:AAEX03009807
RefSeq:XP_862966.1 Ensembl:ENSCAFT00000008256 GeneID:475389
KEGG:cfa:475389 Uniprot:E2RE80
Length = 1897
Score = 229 (85.7 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 63/207 (30%), Positives = 92/207 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V ST + V+W P N G + + + Y D + V +S
Sbjct: 606 PSAPPQKVTCVSTGSTTVRVSWVPPPAASRN--GVITQYSVAYEAVDGEDRGRHVVESIS 663
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W L VGL+ T+Y V V A+ + G GPES L RT P PP V ++ +N
Sbjct: 664 REHSSWDL-VGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T V V+W+ PS + I GY+V ++ R I + + + I L+P
Sbjct: 723 TAVRVSWKLPVPSKQHGQIRGYQVTYVRLENGEPRGPPIIQDVMLAEAQETIISGLTPET 782
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 783 TYSITVAAYTTKGDGARSKPKVVTTTG 809
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 46/134 (34%), Positives = 67/134 (50%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 376 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 435
Query: 128 YVSPSFEEEPII-GYKVRVW-EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 185
P E ++ GY+V + + +S + G L + L PG Y +RVLA
Sbjct: 436 ---PPEEPNGLVRGYRVYYTPDARRPLSAWHKHNTDAG--LLTTVGSLLPGITYSLRVLA 490
Query: 186 FSNGGDGRMSSPAI 199
F+ GDG SP I
Sbjct: 491 FTAVGDGP-PSPTI 503
Score = 150 (57.9 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 51/200 (25%), Positives = 91/200 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D + ++ T
Sbjct: 413 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDARRPLSAWHKHNT 467
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P + + T
Sbjct: 468 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAEAESDT 526
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRY 179
+ ++W + P +E II Y++ W + + + T P + TL+ DL P Y
Sbjct: 527 RIQLSW-LLPP---QERIIKYELVYWAAEDEGQQHKVTFDPTSSYTLE----DLKPDTLY 578
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
H ++ A S G G + +P +
Sbjct: 579 HFQLAARSEMGVG-VFTPTV 597
Score = 143 (55.4 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 50/205 (24%), Positives = 84/205 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETA---VY 56
+P P+ V NSTA+ V+W P+ G++ G+++ Y + +N E +
Sbjct: 707 VPSGPPRKVEVEPLNSTAVRVSWKLPVP---SKQHGQIRGYQVTYVRLENGEPRGPPIIQ 763
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
+ +I GL P+T Y + V AY G+G S+ + T P +P V
Sbjct: 764 DVMLAEAQETIISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPTMMVSTTA 823
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDLSP 175
+N T + W P ++GY+++ D+ A I+ G + + L
Sbjct: 824 MN--TALLQWH--PPKELPGELLGYRLQYHRADE----AKPNILDFGKDDQHFTVTGLHK 875
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAIT 200
G Y R+ A + G G IT
Sbjct: 876 GATYIFRLAAKNRAGPGEEFEKEIT 900
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 49/182 (26%), Positives = 80/182 (43%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y+ ++ A + G G +
Sbjct: 539 RIIKYELVYWAAEDEGQQHKVTF--DPTSSYTL-EDLKPDTLYHFQLAARSEMGVGVFTP 595
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG-YKVRVWEVDQDMS 153
RT + P PP V TTV V+W P+ +I Y V VD +
Sbjct: 596 TVEARTAQSTPSAPPQKVTCVSTGSTTVRVSW-VPPPAASRNGVITQYSVAYEAVDGE-D 653
Query: 154 RANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 212
R + + + D+V L Y + V A ++ G G SSP + + +++ SG
Sbjct: 654 RGRHVVESISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVL---VRTDEDVPSG 710
Query: 213 SP 214
P
Sbjct: 711 PP 712
Score = 126 (49.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 45/188 (23%), Positives = 85/188 (45%)
Query: 15 NSTAINVT---WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
++TA+N W+P + + G L+G+R++Y + D + + + + +++ + GL
Sbjct: 820 STTAMNTALLQWHP----PKELPGELLGYRLQYHRADEAKPNILDF-GKDDQHFT-VTGL 873
Query: 72 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 131
Y ++ A N AG G E E+ + T AP P + + G+ +T +TW
Sbjct: 874 HKGATYIFRLAAKNRAGPGEEFEKEIT-TPEDAPSGFPQNLRVIGLTTSTTELTWDPPVL 932
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ I Y V +++ N T +T + L P Y ++V A ++ G
Sbjct: 933 AERNGRITNYSVVYRDINSQQELQNVT----ADT-HLMLSGLKPDTTYDIKVRARTSKGA 987
Query: 192 GRMSSPAI 199
G +S P+I
Sbjct: 988 GPLS-PSI 994
>RGD|3253 [details] [associations]
symbol:Cntn3 "contactin 3 (plasmacytoma associated)" species:10116
"Rattus norvegicus" [GO:0007399 "nervous system development"
evidence=IDA] [GO:0016337 "cell-cell adhesion" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=NAS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:3253 GO:GO:0007399
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0016337 InterPro:IPR013098 Pfam:PF07679 GO:GO:0046658
HOVERGEN:HBG051047 eggNOG:NOG293951 HOGENOM:HOG000059617 CTD:5067
KO:K06761 OrthoDB:EOG48GW2G EMBL:U11031 IPI:IPI00480731 PIR:I58164
RefSeq:NP_062202.1 UniGene:Rn.10043 ProteinModelPortal:Q62682
SMR:Q62682 STRING:Q62682 PRIDE:Q62682 GeneID:54279 KEGG:rno:54279
UCSC:RGD:3253 InParanoid:Q62682 NextBio:610848 ArrayExpress:Q62682
Genevestigator:Q62682 GermOnline:ENSRNOG00000006144 Uniprot:Q62682
Length = 1028
Score = 225 (84.3 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 62/195 (31%), Positives = 92/195 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP + + +S+ I V+WN I N GRL+G+ ++YW EE++
Sbjct: 802 PTVAPSHISAHSLSSSEIEVSWNTIPWKSSN--GRLLGYEVRYWNNGGEEESSSKVKVAG 859
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ A++ GL+ + YY V AYN AG GP S T + P +PP V + T
Sbjct: 860 NQTSAVLRGLKSNLAYYTAVRAYNTAGAGPFSATVNATTKKTPPSQPPGNV-VWNATDTK 918
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR-YH 180
V + W V E + GYKV + S+ N ++ T A++ L P K Y
Sbjct: 919 VLLNWEQVKALENESEVTGYKVFY----RTSSQNNVQVLNTNKT-SAEL--LLPIKEDYI 971
Query: 181 MRVLAFSNGGDGRMS 195
+ V A ++GGDG S
Sbjct: 972 IEVKATTDGGDGTSS 986
Score = 160 (61.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 50/203 (24%), Positives = 89/203 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPI--ELIRENIRGRLIGHR---IKYWKED---NPEET 53
P+VAP V G + + + +TW+P+ EL G ++ R + W + +P+
Sbjct: 700 PEVAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNP 759
Query: 54 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 113
+ RN +++ P + Y VKV YNN GEGP S + + P PS +
Sbjct: 760 RYVF-----RNESIV----PFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHIS 810
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
++ + + V+W + ++GY+VR W + ++ + GN A + L
Sbjct: 811 AHSLSSSEIEVSWNTIPWKSSNGRLLGYEVRYWNNGGE-EESSSKVKVAGNQTSAVLRGL 869
Query: 174 SPGKRYHMRVLAFSNGGDGRMSS 196
Y+ V A++ G G S+
Sbjct: 870 KSNLAYYTAVRAYNTAGAGPFSA 892
>RGD|62008 [details] [associations]
symbol:Cntn6 "contactin 6" species:10116 "Rattus norvegicus"
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0046658 "anchored to plasma
membrane" evidence=TAS] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 RGD:62008
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007219 InterPro:IPR013098 Pfam:PF07679
GO:GO:0046658 HOVERGEN:HBG051047 eggNOG:NOG293951
HOGENOM:HOG000059617 CTD:27255 KO:K06764 OrthoDB:EOG4PNXG6
EMBL:D87248 IPI:IPI00205421 RefSeq:NP_037357.1 UniGene:Rn.10644
ProteinModelPortal:P97528 STRING:P97528 PRIDE:P97528 GeneID:27256
KEGG:rno:27256 NextBio:608067 ArrayExpress:P97528
Genevestigator:P97528 GermOnline:ENSRNOG00000032517 Uniprot:P97528
Length = 1028
Score = 224 (83.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 59/199 (29%), Positives = 103/199 (51%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--- 58
P++AP+G + F+++ + V+WN I R GR++G+ + YW DN +E+ + +
Sbjct: 802 PRLAPRGTSVQSFSASDMEVSWNAIAWNRNT--GRVLGYEVLYWT-DNSKESMIGKIRVS 858
Query: 59 -SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ TT+N I GL+ +T Y+ V AYN AG GP S T + P +PP+ + K +
Sbjct: 859 GNVTTKN---ITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWK-L 914
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
+ + + + W +V E ++GYK+ + Q + +T N A++ L P +
Sbjct: 915 SNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHVLET-----NNTSAEL--LVPFE 967
Query: 178 R-YHMRVLAFSNGGDGRMS 195
Y + + S+GGDG S
Sbjct: 968 EDYLIEIRTVSDGGDGSSS 986
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 50/201 (24%), Positives = 83/201 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP----EETAVY 56
+P VAP + G + + + +TW PI +N G G+ I + + E+ A+
Sbjct: 699 IPNVAPVNINGGGGSRSELVITWEPIPEELQNGEG--FGYIIMFRPVGSTTWMKEKVALV 756
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
S+ I+ L P + VKV YNN GEG S + + P+ P ++
Sbjct: 757 ESSKFIYRNESIMPLSP---FEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQS 813
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
+ + + V+W ++ + ++GY+V W D I GN +I L
Sbjct: 814 FSASDMEVSWNAIAWNRNTGRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKNITGLRAN 872
Query: 177 KRYHMRVLAFSNGGDGRMSSP 197
Y V A++ G G S P
Sbjct: 873 TIYFASVRAYNTAGTGPSSPP 893
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 49/210 (23%), Positives = 88/210 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +ST ++W P I+ I R + T L+
Sbjct: 597 PPGPPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQ 656
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPT 120
T N A ++GL P +Y +V+A NN G G P L RT P P ++ G + +
Sbjct: 657 TYN-ATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSRS 715
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM-SRANDTIIPVGNTL--DADIVDLSPGK 177
+ +TW + + GY + V + ++ + + I+ LSP
Sbjct: 716 ELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKFIYRNESIMPLSP-- 773
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEK 207
+ ++V ++N G+G +S+ +I + GE++
Sbjct: 774 -FEVKVGVYNNEGEGSLSTVSIVYS-GEDE 801
>UNIPROTKB|G3XAD5 [details] [associations]
symbol:PTPRD "Receptor-type tyrosine-protein phosphatase
delta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
EMBL:CH471071 GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098
Pfam:PF07679 EMBL:AL137125 EMBL:AL356584 EMBL:AL445926
EMBL:AL583805 EMBL:AL590397 UniGene:Hs.446083 HGNC:HGNC:9668
ChiTaRS:PTPRD EMBL:AL133479 EMBL:AL135790 EMBL:AL137069
EMBL:AL137851 EMBL:AL157826 EMBL:AL353638 EMBL:AL353733
EMBL:AL354722 EMBL:AL356054 EMBL:AL390723 EMBL:AL391864
EMBL:AL441884 EMBL:AL451130 EMBL:AL513422 EMBL:AL590307
EMBL:AL591133 EMBL:AL591622 EMBL:AL596451 EMBL:AL669908
ProteinModelPortal:G3XAD5 SMR:G3XAD5 PRIDE:G3XAD5
Ensembl:ENST00000358503 ArrayExpress:G3XAD5 Bgee:G3XAD5
Uniprot:G3XAD5
Length = 1890
Score = 227 (85.0 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 62/209 (29%), Positives = 100/209 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW----KEDNPEETAVYY 57
P PQ + +ST+I V+W P + ++N G + + IKY ++D P E +
Sbjct: 596 PSAPPQDISCTSPSSTSILVSWQPPPVEKQN--GIITEYSIKYTAVDGEDDKPHEI-LGI 652
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +
Sbjct: 653 PSDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAV 710
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSP 175
N T+V V+WR P+ + I GY+V ++ + + + + + D I L P
Sbjct: 711 NSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQDMIISGLQP 770
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 771 ETSYSLTVTAYTTKGDGARSKPKLVSTTG 799
Score = 184 (69.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 323 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEELYKEIDGV----ATTRY--SVAGLSPYS 374
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 375 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 432
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 433 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 491
Query: 196 S 196
S
Sbjct: 492 S 492
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 42/155 (27%), Positives = 71/155 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NST++ V+W +P+ G++ G+++ Y + +N E L
Sbjct: 697 VPSGPPRKVEVEAVNSTSVKVSWRSPVP---NKQHGQIRGYQVHYVRMENGEPKGQPMLK 753
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A +I GLQP+T Y + V AY G+G S+ L T P KP ++
Sbjct: 754 DVMLADAQDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVINHTQ 813
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+N T + W +F P+ GY+++ D +
Sbjct: 814 MN--TALIQWHPPVDTFG--PLQGYRLKFGRKDME 844
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/192 (26%), Positives = 82/192 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST++ ++W P L N G + + + Y ++ N + L
Sbjct: 895 VPTGFPQNLHSEGTTSTSVQLSWQPPVLAERN--GIITKYTLLY-RDINIPLLPMEQLIV 951
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+PDT Y VKV A+ + G GP S RT Q H+K + T
Sbjct: 952 PADTTMTLTGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTL-PVDQVFAKNFHVKAVMKT 1010
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K+ +++ D M D G IV+L P K Y
Sbjct: 1011 SVLLSWE-IPENYNSA--MPFKI-LYD-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 1060
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 1061 FVLTNRGNSAGG 1072
>UNIPROTKB|F1PH17 [details] [associations]
symbol:PTPRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 OMA:GYYIVIV EMBL:AAEX03007837
Ensembl:ENSCAFT00000002280 Uniprot:F1PH17
Length = 1890
Score = 226 (84.6 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 61/208 (29%), Positives = 98/208 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--- 58
P PQ + +ST+I V+W P + ++N G + + IKY D ++ L
Sbjct: 596 PSAPPQDISCTSPSSTSILVSWQPPPVEKQN--GIITEYSIKYTSVDGEDDKPHEILGIP 653
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +N
Sbjct: 654 SDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESFSVLIRTDEDVPSGPPRKVEVEAVN 711
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPG 176
T+V V+WR P+ + I GY+V ++ + + + + + D I L P
Sbjct: 712 STSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQDMIISGLQPE 771
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 772 TSYSLTVTAYTTKGDGARSKPKLVSTTG 799
Score = 187 (70.9 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 323 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEEPYKEIDGV----ATTRY--SVAGLSPYS 374
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 375 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 432
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 433 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 491
Query: 196 S 196
S
Sbjct: 492 S 492
Score = 138 (53.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 55/219 (25%), Positives = 93/219 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NST++ V+W +P+ G++ G+++ Y + +N E L
Sbjct: 697 VPSGPPRKVEVEAVNSTSVKVSWRSPVP---NKQHGQIRGYQVHYVRMENGEPKGQPMLK 753
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A +I GLQP+T Y + V AY G+G S+ L T P KP ++
Sbjct: 754 DVMLADAQDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVINHTQ 813
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA-DIVDLSP 175
+N T + W +F P+ GY+++ D + T + + D D+
Sbjct: 814 MN--TALIQWHPPVDTFG--PLQGYRLKFGRKDTEPL----TTLEFSDKEDHFTATDIHK 865
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
G Y R+ A + G G I ++ +E +G P
Sbjct: 866 GASYIFRLSARNKVGFGE----EIVKEISVPEEVPTGFP 900
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 50/192 (26%), Positives = 82/192 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST++ ++W P L N G + + + Y ++ N + L
Sbjct: 895 VPTGFPQNLHSEGTTSTSVQLSWQPPVLAERN--GIITKYTLLY-RDINIPLLPLEQLIV 951
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+PDT Y VKV A+ + G GP S RT Q H+K + T
Sbjct: 952 PADTTMTLSGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTL-PVDQVFAKNFHVKAVMKT 1010
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K+ +++ D M D G IV+L P K Y
Sbjct: 1011 SVLLSWE-IPENYNSA--MPFKI-LYD-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 1060
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 1061 FVLTNRGNSAGG 1072
>UNIPROTKB|A7MBJ4 [details] [associations]
symbol:PTPRF "Receptor-type tyrosine-protein phosphatase F"
species:9913 "Bos taurus" [GO:0035335 "peptidyl-tyrosine
dephosphorylation" evidence=ISS] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0008201 GO:GO:0007155
GO:GO:0004725 InterPro:IPR013098 Pfam:PF07679 eggNOG:COG5599
HOGENOM:HOG000010250 KO:K05695 GeneTree:ENSGT00590000082937
OrthoDB:EOG4BG8V3 EMBL:BC151592 IPI:IPI00702912
RefSeq:NP_001094549.1 UniGene:Bt.5379 ProteinModelPortal:A7MBJ4
SMR:A7MBJ4 STRING:A7MBJ4 PRIDE:A7MBJ4 Ensembl:ENSBTAT00000024046
GeneID:512072 KEGG:bta:512072 CTD:5792 InParanoid:A7MBJ4
OMA:FTPTIEA NextBio:20870237 Uniprot:A7MBJ4
Length = 1898
Score = 225 (84.3 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 63/207 (30%), Positives = 91/207 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V ST + V+W P N G + + + Y D + V +
Sbjct: 606 PSAPPQKVTCVSVGSTTVRVSWVPPPADSRN--GVITQYSVAYEAVDGEDRGRHVVDGIG 663
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W L VGL+ T+Y V V A+ + G GPES L RT P PP V ++ +N
Sbjct: 664 REHSSWDL-VGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T V V+W+ PS + I GY+V ++ R I + + + I L+P
Sbjct: 723 TAVRVSWKLPVPSKQHGQIRGYQVTYVRLENGEPRGAPIIQDVMLAEAQETTISGLTPET 782
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P I G
Sbjct: 783 TYSITVAAYTTKGDGARSKPKIVTTTG 809
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 50/137 (36%), Positives = 70/137 (51%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 376 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 435
Query: 128 YVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV----DLSPGKRYHMR 182
P E ++ GY+V + D SR + NT DA ++ L PG Y +R
Sbjct: 436 ---PPEEPNGLVRGYRV-YYTPD---SRRPLSAWHKHNT-DAGLLTTVGSLLPGITYSLR 487
Query: 183 VLAFSNGGDGRMSSPAI 199
VLAF+ GDG SP I
Sbjct: 488 VLAFTAVGDGP-PSPTI 503
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R++ + + YW ED ++ V + T ++ + L+PDT Y ++ A + G G +
Sbjct: 539 RIVKYELVYWAAEDEGQQHKVTF--DPTSSYT-VEDLKPDTLYRFQLAARSELGVGVFTP 595
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP--IIGYKVRVWEVDQDM 152
RT + P PP V + TTV V+W V P + I Y V VD +
Sbjct: 596 TIEARTAQSTPSAPPQKVTCVSVGSTTVRVSW--VPPPADSRNGVITQYSVAYEAVDGE- 652
Query: 153 SRANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 211
R + +G + D+V L Y + V A ++ G G SSP + + +++ S
Sbjct: 653 DRGRHVVDGIGREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVL---VRTDEDVPS 709
Query: 212 GSP 214
G P
Sbjct: 710 GPP 712
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/199 (24%), Positives = 89/199 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D+ + ++ T
Sbjct: 413 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDSRRPLSAWHKHNT 467
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P + + T
Sbjct: 468 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAEVDSDT 526
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ ++W + P +E I+ Y++ W + + + T P T + DL P Y
Sbjct: 527 RIQLSW-LLPP---QERIVKYELVYWAAEDEGQQHKVTFDP---TSSYTVEDLKPDTLYR 579
Query: 181 MRVLAFSNGGDGRMSSPAI 199
++ A S G G + +P I
Sbjct: 580 FQLAARSELGVG-VFTPTI 597
Score = 135 (52.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 51/205 (24%), Positives = 83/205 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NSTA+ V+W P+ G++ G+++ Y + +N E +
Sbjct: 707 VPSGPPRKVEVEPLNSTAVRVSWKLPVP---SKQHGQIRGYQVTYVRLENGEPRGAPIIQ 763
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A I GL P+T Y + V AY G+G S+ + T P +P V
Sbjct: 764 DVMLAEAQETTISGLTPETTYSITVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMVSTTA 823
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDLSP 175
+N T + W P ++GY+++ D+ A + I G + + L
Sbjct: 824 MN--TALLQWH--PPKELPGELLGYRLQYRRADE----ARPSTIDFGKDDQHFTVTGLHK 875
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAIT 200
G Y R+ A + G G IT
Sbjct: 876 GATYIFRLTAKNRAGLGEEFEKEIT 900
Score = 117 (46.2 bits), Expect = 0.0010, P = 0.0010
Identities = 44/188 (23%), Positives = 82/188 (43%)
Query: 15 NSTAINVT---WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
++TA+N W+P + + G L+G+R++Y + D + + + + +++ + GL
Sbjct: 820 STTAMNTALLQWHP----PKELPGELLGYRLQYRRADEARPSTIDF-GKDDQHFT-VTGL 873
Query: 72 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 131
Y ++ A N AG G E E+ + T P P + + G+ +T + W
Sbjct: 874 HKGATYIFRLTAKNRAGLGEEFEKEIT-TPEDVPSGFPQNLRVIGLTTSTTELIWDPPVL 932
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ I Y V +++ N T TL L P Y ++V A ++ G
Sbjct: 933 AERNGRITNYTVVYRDINSQQELQNVTA-DTHLTLSG----LKPDTTYDIKVRARTSKGA 987
Query: 192 GRMSSPAI 199
G +S P+I
Sbjct: 988 GPLS-PSI 994
>MGI|MGI:3042287 [details] [associations]
symbol:Cntn5 "contactin 5" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:3042287 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007605 InterPro:IPR013098 Pfam:PF07679
HOVERGEN:HBG051047 eggNOG:NOG293951 HOGENOM:HOG000059617
GeneTree:ENSGT00550000074380 CTD:53942 KO:K06763 OrthoDB:EOG4JWVCR
OMA:SPAADNH EMBL:AC100491 EMBL:AC102350 EMBL:AC107635 EMBL:AC113470
EMBL:AC117684 EMBL:AC118029 EMBL:AC153417 EMBL:AC154645
EMBL:AC154651 EMBL:CT033779 IPI:IPI00849147 RefSeq:NP_001164258.1
UniGene:Mm.490683 ProteinModelPortal:P68500 SMR:P68500
STRING:P68500 PhosphoSite:P68500 PaxDb:P68500 PRIDE:P68500
Ensembl:ENSMUST00000074133 Ensembl:ENSMUST00000160216 GeneID:244682
KEGG:mmu:244682 InParanoid:P68500 NextBio:386385 Bgee:P68500
CleanEx:MM_CNTN5 Genevestigator:P68500 Uniprot:P68500
Length = 1098
Score = 222 (83.2 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + + + I V W + +E++ GR G I YWK+ PE++ +R
Sbjct: 874 PTAAPTDVTATSVSVSEIFVVWKHV---KESL-GRPQGFEISYWKDTEPEDSVETVRTRG 929
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ GL+ +T Y++ V AYN AG GP S T R P++PP + + +
Sbjct: 930 NESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREASTTTKRHPPREPPGNLRWEQ-QGSQ 988
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V + W V P E ++GYKV + + +T P +V L Y +
Sbjct: 989 VSLGWEPVRPLANESEVMGYKVFYRQEGHSEGQVIETQKPQA------VVPLPEAGVYII 1042
Query: 182 RVLAFSNGGDGRMSS 196
V A+S GGDG SS
Sbjct: 1043 EVRAYSEGGDGTASS 1057
Score = 150 (57.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 50/206 (24%), Positives = 87/206 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG--RLIGHR---IKYWKEDNPEET-A 54
+P+ AP V R + + W P+ +N G ++ R + WKE + A
Sbjct: 771 VPKTAPSNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSEA 830
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ R + P T + VKV YNN G+GP S+ + + P P+ V
Sbjct: 831 SKFIYRDE-------SVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTA 883
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
++ + + V W++V S G+++ W+ D + + +T+ GN + L
Sbjct: 884 TSVSVSEIFVVWKHVKESLGRPQ--GFEISYWK-DTEPEDSVETVRTRGNESFVMLTGLE 940
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAIT 200
YH+ V A++ G G S A T
Sbjct: 941 GNTLYHLTVRAYNGAGYGPPSREAST 966
>MGI|MGI:2443847 [details] [associations]
symbol:Sdk2 "sidekick homolog 2 (chicken)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:2443847 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR013151 Pfam:PF00047 GeneTree:ENSGT00690000101869
HOGENOM:HOG000231052 HOVERGEN:HBG080083 OrthoDB:EOG4CNQQ4 KO:K16353
CTD:54549 EMBL:AY351699 EMBL:AK161326 EMBL:BC038036 EMBL:AK129379
IPI:IPI00172906 IPI:IPI00648795 IPI:IPI00742366 RefSeq:NP_766388.2
UniGene:Mm.130504 UniGene:Mm.401394 ProteinModelPortal:Q6V4S5
SMR:Q6V4S5 PhosphoSite:Q6V4S5 PaxDb:Q6V4S5 PRIDE:Q6V4S5
Ensembl:ENSMUST00000041627 GeneID:237979 KEGG:mmu:237979
UCSC:uc007mfd.1 UCSC:uc007mfg.1 InParanoid:Q6V4S5 OMA:IAPNITR
NextBio:383620 Bgee:Q6V4S5 CleanEx:MM_SDK2 Genevestigator:Q6V4S5
GermOnline:ENSMUSG00000041592 Uniprot:Q6V4S5
Length = 2176
Score = 225 (84.3 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 58/199 (29%), Positives = 96/199 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-R 60
P +AP V R + T++ + W P+ + N +G++IKY + D +T + + R
Sbjct: 1100 PDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQDR 1159
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
R + I L+ T+Y V+V A+N G GP S+ + RT P P+ V +
Sbjct: 1160 VEREYT-IEDLEEWTEYRVQVQAFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSS 1218
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ V W + + ++GYKVR E D D S+ ++ ++ A + L Y
Sbjct: 1219 SMLVRWSEIPEADRNGLVLGYKVRYKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYE 1277
Query: 181 MRVLAFSNGGDGRMSSPAI 199
++VLAF+ GDG S P I
Sbjct: 1278 VQVLAFTRIGDGSPSHPPI 1296
Score = 215 (80.7 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 63/200 (31%), Positives = 87/200 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ V + G + +I + W P +N G L G+ I+Y P ++
Sbjct: 694 PTAPPQNVIASGRTNQSIMIQWQPPPESHQN--GILKGYIIRYCLAGLPVGYQFKNITDA 751
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N L+ L T Y ++V AYN+AG G S + E T + P PP VH + N TT
Sbjct: 752 DVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTT 811
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVD-LSPGKRY 179
+ TW SP F GYK+ WE Q+ T P +++ V L Y
Sbjct: 812 IRFTWNAPSPQFINGINQGYKLIAWEPAQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEY 871
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
VL F+ GDG SSP +
Sbjct: 872 FTSVLCFTTPGDGPRSSPQL 891
Score = 193 (73.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 57/188 (30%), Positives = 89/188 (47%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ V +T ++VTW P L +N G + G++I +W+ T
Sbjct: 1626 VPTAAPQNVAIHSATATQLDVTWEPPPLDNQN--GDIQGYKIYFWEVQRRNLTERVKTLF 1683
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
N + L T Y V V A+N AG+GP S +T + AP P S V + T
Sbjct: 1684 LAENSVKLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPGS-VKFSELTTT 1742
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPV-GNT-LDADIVDLSPGK 177
+V+V+W +P F P+ GY++ V+E + + + + V GN+ L + DL+ G
Sbjct: 1743 SVNVSWD--APQFPNGPLEGYRL-VYEPCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGM 1799
Query: 178 RYHMRVLA 185
Y R+ A
Sbjct: 1800 TYRFRIKA 1807
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 58/219 (26%), Positives = 99/219 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS- 59
+P V P V + NST I TWN + I G G+++ W+ EE +
Sbjct: 794 VPTVPPGNVHAEATNSTTIRFTWNAPS--PQFINGINQGYKLIAWEPAQEEEVTMVTARP 851
Query: 60 --RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ + + + GL+ T+Y+ V+ + G+GP S L RT+ P P + I
Sbjct: 852 NFQDSIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSSPQLVRTHEDVPG-PVGHLSFNDI 910
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGN-TLDADIVDLSP 175
T++ V+W+ P + + GY++ WE + +R N + + N TL+ + L+
Sbjct: 911 LDTSLKVSWQ--EPGEKNGILTGYRIS-WE---EYNRTNTRVTHYLPNVTLEYRVTGLTA 964
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
Y + V A ++ G G++S A T G E G+P
Sbjct: 965 LTTYTIEVAAMTSKGQGQVS--ASTISSGVPPELP-GAP 1000
Score = 136 (52.9 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 35/144 (24%), Positives = 68/144 (47%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P V + S+++ V W+ I N G ++G++++Y ++D+ + + +
Sbjct: 1202 VPSSGPTNVSALATTSSSMLVRWSEIPEADRN--GLVLGYKVRYKEKDSDSQPRFWLVEG 1259
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 119
+ A + GL Y V+V+A+ G+G P LERT P PP + +
Sbjct: 1260 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRT 1318
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKV 143
T+V + W+ P+ I+ Y++
Sbjct: 1319 TSVRLIWQ--PPAAPNGIILAYQI 1340
Score = 132 (51.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 48/178 (26%), Positives = 76/178 (42%)
Query: 27 ELIRENIRG---RLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL---IVGLQPDTKYYVK 80
EL+ + +RG R I + W E T++Y + TR + L +Y ++
Sbjct: 1547 ELLYDGLRGFTLRGINNPGAKWAE----LTSLYSMRNLTRPSLTQYELDNLSKHRRYEIR 1602
Query: 81 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 140
+ YN GEGP S P P V I T + VTW + I G
Sbjct: 1603 MSIYNAVGEGPLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQNGDIQG 1662
Query: 141 YKVRVWEVDQ-DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 197
YK+ WEV + +++ T+ N++ + +L+ Y + V AF+ GDG S+P
Sbjct: 1663 YKIYFWEVQRRNLTERVKTLFLAENSVK--LKNLTGYTAYMVSVAAFNAAGDGPRSTP 1718
Score = 55 (24.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY 44
P AP + +T++ + W P + I G L+G RI+Y
Sbjct: 1505 PDEAPTILSVTPHTTTSVLIRWQPPS--EDKINGILLGFRIRY 1545
Score = 53 (23.7 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 169 DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
++ +LS +RY +R+ ++ G+G +S P F +GE
Sbjct: 1589 ELDNLSKHRRYEIRMSIYNAVGEGPLSPPQEVF-VGE 1624
>MGI|MGI:99534 [details] [associations]
symbol:Cntn3 "contactin 3" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:99534 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
EMBL:CH466523 InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047
eggNOG:NOG293951 HOGENOM:HOG000059617 GeneTree:ENSGT00550000074380
CTD:5067 KO:K06761 OMA:VHPMSSY OrthoDB:EOG48GW2G EMBL:L01991
EMBL:AC114423 EMBL:AC153597 EMBL:AC153600 EMBL:AC155328
IPI:IPI00270915 PIR:A53449 RefSeq:NP_032805.2 UniGene:Mm.435479
ProteinModelPortal:Q07409 STRING:Q07409 PhosphoSite:Q07409
PaxDb:Q07409 PRIDE:Q07409 Ensembl:ENSMUST00000032159 GeneID:18488
KEGG:mmu:18488 UCSC:uc009dch.1 InParanoid:Q07409 NextBio:294202
CleanEx:MM_CNTN3 Genevestigator:Q07409
GermOnline:ENSMUSG00000030075 Uniprot:Q07409
Length = 1028
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 61/195 (31%), Positives = 92/195 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP + + +S+ I V+WN I N G L+G+ ++YW EE++
Sbjct: 802 PTVAPSHISAHSLSSSEIEVSWNTIPWKLSN--GHLLGYEVRYWNNGGEEESSRKVKVAG 859
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ A++ GL+ + YY V AYN+AG GP S T + P +PP V + T
Sbjct: 860 NQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNV-VWNATDTK 918
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR-YH 180
V + W V E + GYKV + S+ N ++ T A++ L P K Y
Sbjct: 919 VLLNWEQVKAMENESEVTGYKVFY----RTSSQNNVHVLNTNKT-SAEL--LLPIKEDYI 971
Query: 181 MRVLAFSNGGDGRMS 195
+ V A ++GGDG S
Sbjct: 972 IEVKATTDGGDGTSS 986
Score = 160 (61.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/203 (24%), Positives = 89/203 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPI--ELIRENIRGRLIGHR---IKYWKED---NPEET 53
P++AP V G + + + +TW+P+ EL G ++ R + W + +P+
Sbjct: 700 PEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNP 759
Query: 54 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 113
+ RN +++ P + Y VKV YNN GEGP S + + P PS +
Sbjct: 760 RYVF-----RNESIV----PFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHIS 810
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
++ + + V+W + ++GY+VR W + + + GN A + L
Sbjct: 811 AHSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNNGGEEESSRKVKV-AGNQTSAVLRGL 869
Query: 174 SPGKRYHMRVLAFSNGGDGRMSS 196
Y+ V A+++ G G S+
Sbjct: 870 KSNLAYYTAVRAYNSAGAGPFSA 892
>UNIPROTKB|F1SFM0 [details] [associations]
symbol:CNTN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
GO:GO:0045665 GeneTree:ENSGT00550000074380 EMBL:CU468616
Ensembl:ENSSSCT00000012616 OMA:FEKVGGH Uniprot:F1SFM0
Length = 535
Score = 214 (80.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 60/199 (30%), Positives = 93/199 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
P P +F+R ++T I V W +P+E +N RGR+ G+ +KYW+ ++ EE A +
Sbjct: 310 PSKPPASIFARSLSATDIEVFWASPME---KN-RGRIQGYEVKYWRHEDKEENARKIRTV 365
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ I L+ Y++ V AYN+AG GP S T + P +PP + I + +
Sbjct: 366 GNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNI-IWNSSDS 424
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS--RANDTIIPVGNTLDAD-IVDLSPG 176
+ + W V E + GYKV W S N T + + D D I+++ P
Sbjct: 425 KIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKP- 483
Query: 177 KRYHMRVLAFSNGGDGRMS 195
FS+GGDG S
Sbjct: 484 ---------FSDGGDGSSS 493
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 54/203 (26%), Positives = 89/203 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS 59
+P+V P V G + + + +TW E + E ++ GR G+ + + S
Sbjct: 203 LPEVTPANVSGGGGSKSELVITW---ETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS 259
Query: 60 RTTRNWALI-VGLQPDTKYYVKVMAYNNAGEGPESERYL----ERTYRKAPQKPPSAVHI 114
+ ++P + + VKV YNN GEGP S + E P KPP+++
Sbjct: 260 ADASRYVFRNESVRPFSPFEVKVGVYNNKGEGPFSPTTVVYSAEEDTPAEPSKPPASIFA 319
Query: 115 KGINPTTVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
+ ++ T + V W SP + I GY+V+ W + A I VGN I +L
Sbjct: 320 RSLSATDIEVFW--ASPMEKNRGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNL 376
Query: 174 SPGKRYHMRVLAFSNGGDGRMSS 196
YH+ V A+++ G G S+
Sbjct: 377 KGSALYHLAVKAYNSAGTGPSSA 399
>UNIPROTKB|E1BE12 [details] [associations]
symbol:CNTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0045665 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00550000074380 OMA:IEQGTLN
EMBL:DAAA02053908 EMBL:DAAA02053909 EMBL:DAAA02053910
EMBL:DAAA02053911 EMBL:DAAA02053912 EMBL:DAAA02053913
EMBL:DAAA02053914 IPI:IPI00924138 Ensembl:ENSBTAT00000060980
Uniprot:E1BE12
Length = 875
Score = 217 (81.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
P P +F+R ++T I V W +P+E +N RGR+ G+ +KYW+ D+ EE A +
Sbjct: 650 PTKPPASIFARSLSATDIEVFWASPME---KN-RGRIQGYEVKYWRHDDKEENARKIRTI 705
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ I L+ Y++ V AYN+AG GP S T + P +PP + I + +
Sbjct: 706 GNQTSTKITNLKGSALYHLAVKAYNSAGTGPASATVNVTTRKPPPSQPPGNI-IWNSSDS 764
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ + W V E + GYKV W SR + T + N ++ L + Y
Sbjct: 765 KIILNWDQVKALDNESEVKGYKVLYRW------SRQSSTSVIETNKTSVEL-SLPFDEDY 817
Query: 180 HMRVLAFSNGGDGRMS 195
+ + FS+GGDG S
Sbjct: 818 IIEIKPFSDGGDGSSS 833
Score = 187 (70.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 52/199 (26%), Positives = 90/199 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS 59
+P+V P V G + + + +TW E + E ++ GR G+ + + S
Sbjct: 547 LPEVTPANVSGGGGSKSELVITW---ETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS 603
Query: 60 RTTRNWALI-VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
+ ++P + + VKV +NN GEGP S + + + P KPP+++ + ++
Sbjct: 604 ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLS 663
Query: 119 PTTVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
T + V W SP + I GY+V+ W D A I +GN I +L
Sbjct: 664 ATDIEVFW--ASPMEKNRGRIQGYEVKYWRHDDKEENARK-IRTIGNQTSTKITNLKGSA 720
Query: 178 RYHMRVLAFSNGGDGRMSS 196
YH+ V A+++ G G S+
Sbjct: 721 LYHLAVKAYNSAGTGPASA 739
>UNIPROTKB|E1BPC9 [details] [associations]
symbol:LOC100140960 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071206 "establishment of protein localization to
juxtaparanode region of axon" evidence=IEA] [GO:0060168 "positive
regulation of adenosine receptor signaling pathway" evidence=IEA]
[GO:0048710 "regulation of astrocyte differentiation" evidence=IEA]
[GO:0048168 "regulation of neuronal synaptic plasticity"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045163 "clustering of
voltage-gated potassium channels" evidence=IEA] [GO:0044224
"juxtaparanode region of axon" evidence=IEA] [GO:0043621 "protein
self-association" evidence=IEA] [GO:0043209 "myelin sheath"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0033268 "node of Ranvier" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0031133 "regulation of axon
diameter" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0021853 "cerebral cortex GABAergic interneuron
migration" evidence=IEA] [GO:0010954 "positive regulation of
protein processing" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008076 "voltage-gated potassium channel complex"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001948 "glycoprotein binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0007411 GO:GO:0001764
GO:GO:0009986 GO:GO:0000226 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043025 GO:GO:0007612 GO:GO:0030246 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045665 GO:GO:0008076 GO:GO:0031623 GO:GO:0022010
GO:GO:0010954 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007413
GO:GO:0033268 GO:GO:0048168 GO:GO:0007628 GO:GO:0021853
GO:GO:0043209 GeneTree:ENSGT00550000074380 KO:K06760 OMA:ECFAFGN
GO:GO:0044224 GO:GO:0045163 GO:GO:0071206 GO:GO:0060168
GO:GO:0048710 GO:GO:0031133 EMBL:DAAA02041932 EMBL:DAAA02041931
IPI:IPI00711874 RefSeq:XP_003587094.1 PRIDE:E1BPC9
Ensembl:ENSBTAT00000019501 GeneID:100140960 KEGG:bta:100140960
Uniprot:E1BPC9
Length = 1040
Score = 218 (81.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 46/142 (32%), Positives = 76/142 (53%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+VAP V+++ +S+ +NV+W P++ +++ G L+G+ I+YWK A +
Sbjct: 812 PRVAPPKVWAKAVSSSEMNVSWEPVQ---QDMNGILLGYEIRYWKAGAKAAAAERVRTAG 868
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
AL+ GL TKY+V V AYN AG GP S T + P++PP + + ++
Sbjct: 869 LDTSALVTGLHASTKYHVTVRAYNRAGTGPASPSANATTMKPPPRRPPGNISWT-FSSSS 927
Query: 122 VHVTWRYVSPSFEEEPIIGYKV 143
+ + W V P E + GYK+
Sbjct: 928 LSIKWDPVVPLGNESAVTGYKM 949
Score = 180 (68.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/198 (24%), Positives = 87/198 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP G+ G + VTW P+ RE G G+ + + ++
Sbjct: 710 PSVAPSGLSGGGGAPGELTVTWTPMS--REYQHGGGFGYLVSFRRQGGTSWQTARVPGAD 767
Query: 62 TRNWALIV-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ + ++P T + VK+ +YN G+GPES + + + P+ P V K ++ +
Sbjct: 768 AQYFVYSNDSIRPYTPFEVKIRSYNRRGDGPESLVAVVYSAEEEPRVAPPKVWAKAVSSS 827
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++V+W V ++GY++R W+ + A + + G A + L +YH
Sbjct: 828 EMNVSWEPVQQDMNGI-LLGYEIRYWKAGAKAAAA-ERVRTAGLDTSALVTGLHASTKYH 885
Query: 181 MRVLAFSNGGDGRMSSPA 198
+ V A++ G G S A
Sbjct: 886 VTVRAYNRAGTGPASPSA 903
>UNIPROTKB|E1BIU8 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022038 "corpus callosum development" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021766
"hippocampus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021510 "spinal cord development"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0021987 GO:GO:0021766
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0004725 GO:GO:0035335
GO:GO:0021549 GO:GO:0021510 InterPro:IPR013098 Pfam:PF07679
GO:GO:0022038 GeneTree:ENSGT00590000082937 OMA:TTMIVQW
EMBL:DAAA02019588 IPI:IPI00717208 ProteinModelPortal:E1BIU8
Ensembl:ENSBTAT00000044949 Uniprot:E1BIU8
Length = 1911
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 60/207 (28%), Positives = 92/207 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P N G L+ + ++Y ++P+ V +
Sbjct: 605 PSAPPQDVKCVSTRSTAILVSWRPPPPDTHN--GALVSYSVRYRPLGSEDPQPKEVNGIP 662
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L T+Y + +A+ G GPES + RT P PP V + +N
Sbjct: 663 PTTTQ-ILLEALDKWTEYRITAVAHTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNA 721
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T + V WR +P + I GY+V ++ +R I I + + + I +L P
Sbjct: 722 TAIRVLWRSPAPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDIMLADAQEMVITNLQPET 781
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 782 AYSITVAAYTMKGDGARSKPKVVVTKG 808
Score = 166 (63.5 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 53/190 (27%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 332 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 383
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W P
Sbjct: 384 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIIQWE--EPVEPN 441
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY++ + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 442 GLIRGYRI-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 500
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 501 DPIQVKTQQG 510
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 58/198 (29%), Positives = 91/198 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R ++T + + W E + N G + G+RI Y E PE +
Sbjct: 413 PASAPRNVQARMLSATTMIIQWE--EPVEPN--GLIRGYRIYYTME--PEHPVGNWQKHN 466
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + + +
Sbjct: 467 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-FRAEAKSE 525
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKR 178
T++ ++W SP +E II Y++ E D A T P A +VD L P
Sbjct: 526 TSIGLSW---SPP-RQESIIKYELLYREGDHGREVAR-TFDPA----TAFVVDDLKPNTE 576
Query: 179 YHMRVLAFSNGGDGRMSS 196
Y R+ A S G G +S
Sbjct: 577 YAFRLAARSPQGLGAFTS 594
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 47/196 (23%), Positives = 83/196 (42%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + + T+I ++W+P +E+I I + + Y + D+ E A + T
Sbjct: 515 PMNFRAEAKSETSIGLSWSPPR--QESI----IKYELLYREGDHGREVARTFDPAT---- 564
Query: 66 ALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
A +V L+P+T+Y ++ A + G G + +RT + P PP V T + V
Sbjct: 565 AFVVDDLKPNTEYAFRLAARSPQGLGAFTSVVRQRTLQSKPSAPPQDVKCVSTRSTAILV 624
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRV 183
+WR P ++ Y VR + + + + IP T + L Y +
Sbjct: 625 SWRPPPPDTHNGALVSYSVRYRPLGSEDPQPKEVNGIPP-TTTQILLEALDKWTEYRITA 683
Query: 184 LAFSNGGDGRMSSPAI 199
+A + G G SSP +
Sbjct: 684 VAHTEVGPGPESSPVV 699
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 46/203 (22%), Positives = 87/203 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA---VYY 57
+P P+ V + N+TAI V W R++ G++ G+++ Y + + E +
Sbjct: 706 VPSAPPRKVEAEALNATAIRVLWRSPAPGRQH--GQIRGYQVHYVRMEGAEARGPPRIKD 763
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ +I LQP+T Y + V AY G+G S+ + T +P + ++
Sbjct: 764 IMLADAQEMVITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKGAVLGRP--TLSVQQT 821
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
++ W + + E+E ++GY+++ D A P + A V G
Sbjct: 822 PEGSLLARWEPPAGATEDE-VLGYRLQFGREDSS-PLATLEFPPTEDHYTASGVH--KGA 877
Query: 178 RYHMRVLAFSNGGDGRMSSPAIT 200
Y R+ A S GG G ++ ++
Sbjct: 878 TYVFRLAARSRGGLGEEAAEVLS 900
>UNIPROTKB|Q8AV57 [details] [associations]
symbol:SDK2 "Protein sidekick-2" species:9031 "Gallus
gallus" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030054 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0045202 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
HOGENOM:HOG000231052 HOVERGEN:HBG080083 OrthoDB:EOG4CNQQ4 KO:K16353
EMBL:AF537108 IPI:IPI00571050 RefSeq:NP_989869.1 UniGene:Gga.118
ProteinModelPortal:Q8AV57 SMR:Q8AV57 PRIDE:Q8AV57 GeneID:395215
KEGG:gga:395215 CTD:54549 InParanoid:Q8AV57 NextBio:20815304
Uniprot:Q8AV57
Length = 2177
Score = 221 (82.9 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 66/202 (32%), Positives = 96/202 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR--LIGHRIKYWKEDNPEETAVYYL- 58
P VAP V R + T++ + W P L+ + G +G+RI+Y + D V+ +
Sbjct: 1101 PDVAPANVTLRTASETSLWLRWMP--LLEQEYNGNPDSVGYRIRYLRSDGQGRAVVHVIH 1158
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
R R + I L+ T+Y V+V A+N G GP S L RT P PS V + +
Sbjct: 1159 DRVEREYT-IEDLEEWTEYRVQVQAFNAIGSGPWSHLVLGRTRESVPSSGPSNVSAQATS 1217
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGK 177
+ + V W + + I+GYKV E D + +RA + GNT A + L
Sbjct: 1218 SSNMLVRWSDIPEADCNGLILGYKVMFKEKDSE-ARAQFWLAE-GNTSRSAQLTGLGKFM 1275
Query: 178 RYHMRVLAFSNGGDGRMSSPAI 199
Y +RVLAF+ GDG S P I
Sbjct: 1276 LYEIRVLAFTRIGDGVPSRPPI 1297
Score = 202 (76.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 62/202 (30%), Positives = 87/202 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ V + G + +I + W P +N G L G+ I+Y P ++
Sbjct: 695 PFAPPQNVIASGRTNQSIMIQWQPPPESHQN--GVLKGYIIRYCLAGLPVGYQFKNITNA 752
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N L+ L T Y ++V AYN+AG G S + E T + P PP V + N TT
Sbjct: 753 DVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSMKVTEWTLQGVPTVPPGNVQTEATNSTT 812
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD----IVDLSPGK 177
+ TW SP F GYK+ WE + + T+ P N D+ +V L
Sbjct: 813 IRFTWNPPSPQFINGINQGYKLIAWEPEHEEEATVVTVRP--NFQDSVHVGYVVGLKKFT 870
Query: 178 RYHMRVLAFSNGGDGRMSSPAI 199
Y VL F+ GDG S P +
Sbjct: 871 EYLTSVLCFTTPGDGPRSPPQL 892
Score = 194 (73.4 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 63/219 (28%), Positives = 99/219 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
MP APQ V + +T ++VTW P +N G + G++I +W+ E+A
Sbjct: 1627 MPTGAPQNVAVKAATATQLDVTWEPPPTESQN--GDIQGYKIHFWEAQRQNESARVKTLF 1684
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ L T Y+V + A+N AG+GP S RT + AP P S + + T
Sbjct: 1685 LPETGVKLKNLTGYTSYWVSIAAFNAAGDGPRSTPVTARTQQAAPSAPGS-IRFSELTTT 1743
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPV-GNT-LDADIVDLSPGK 177
+V+V+W P + GY++ V+E + + + + V GN+ L + DL+ G
Sbjct: 1744 SVNVSWE--PPPLPNGILEGYRL-VYEPCMPVDGVSKIVTVDVKGNSPLWMKVKDLAEGI 1800
Query: 178 RYHMRVLA--FSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
Y R+ A F+ G D + IT GE G P
Sbjct: 1801 TYRFRIRAKTFAYGPDVEAN---ITTGPGEGAPGPPGEP 1836
Score = 190 (71.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 57/205 (27%), Positives = 99/205 (48%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS- 59
+P V P V + NST I TWNP + I G G+++ W+ ++ EE V +
Sbjct: 795 VPTVPPGNVQTEATNSTTIRFTWNPPS--PQFINGINQGYKLIAWEPEHEEEATVVTVRP 852
Query: 60 --RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ + + +VGL+ T+Y V+ + G+GP S L RT+ P P + I
Sbjct: 853 NFQDSVHVGYVVGLKKFTEYLTSVLCFTTPGDGPRSPPQLVRTHEDVPG-PVGHLSFSEI 911
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGN-TLDADIVDLSP 175
T++ V+W+ P + + GY++ WE + +R N + + N TL+ + L+
Sbjct: 912 LDTSLKVSWQ--EPLEKNGILTGYRIS-WE---EYNRTNTRVTHYLPNVTLEYRVTGLTA 965
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAIT 200
Y + V A ++ G G++SS I+
Sbjct: 966 LTTYTIEVAAMTSKGQGQVSSSTIS 990
Score = 153 (58.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 47/174 (27%), Positives = 73/174 (41%)
Query: 27 ELIRENIRGRL---IGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 83
EL+ +++RG IG+ W E P AV+ LS + + L +Y +++
Sbjct: 1548 ELLYDSLRGFTLHGIGNPGATWAELTPVY-AVHNLSEVSLTQYELDNLSKHRRYEIRMSV 1606
Query: 84 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 143
YN GEGP S P P V +K T + VTW + I GYK+
Sbjct: 1607 YNAVGEGPPSPPQEVFVGEAMPTGAPQNVAVKAATATQLDVTWEPPPTESQNGDIQGYKI 1666
Query: 144 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 197
WE + A + + T + +L+ Y + + AF+ GDG S+P
Sbjct: 1667 HFWEAQRQNESARVKTLFLPET-GVKLKNLTGYTSYWVSIAAFNAAGDGPRSTP 1719
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 46/202 (22%), Positives = 91/202 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P V ++ +S+ + V W+ I + G ++G+++ + KE + E A ++L+
Sbjct: 1203 VPSSGPSNVSAQATSSSNMLVRWSDIP--EADCNGLILGYKVMF-KEKDSEARAQFWLAE 1259
Query: 61 --TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGI 117
T+R+ A + GL Y ++V+A+ G+G P LERT P PP + +
Sbjct: 1260 GNTSRS-AQLTGLGKFMLYEIRVLAFTRIGDGVPSRPPILERTLDDVPG-PPVGMLFPEV 1317
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
T+V + W+ P+ I+ Y++ ++ + A + + +T L P
Sbjct: 1318 RTTSVRLIWQ--PPTAPNGIILAYQL-THRLNTTTANAAVSEVLGPSTRQYTATGLQPEA 1374
Query: 178 RYHMRVLAFSNGGDGRMSSPAI 199
Y + A + G G + +
Sbjct: 1375 TYLFSITAQTRKGWGEAAEALV 1396
Score = 55 (24.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY 44
P+ AP + +T++ + W P + I G L+G R++Y
Sbjct: 1506 PEEAPTILSVTPHTTTSVLIRWQPPS--EDKINGILLGFRLRY 1546
>UNIPROTKB|Q9P232 [details] [associations]
symbol:CNTN3 "Contactin-3" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0005886 GO:GO:0007399
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047
eggNOG:NOG293951 HOGENOM:HOG000059617 EMBL:AC016950 EMBL:AC024222
EMBL:AC128653 EMBL:AC128656 EMBL:BC150608 EMBL:AB040929
EMBL:AL512746 IPI:IPI00292791 RefSeq:NP_065923.1 UniGene:Hs.12723
PDB:1WJ3 PDBsum:1WJ3 ProteinModelPortal:Q9P232 SMR:Q9P232
IntAct:Q9P232 STRING:Q9P232 PhosphoSite:Q9P232 DMDM:296439395
PaxDb:Q9P232 PRIDE:Q9P232 Ensembl:ENST00000263665 GeneID:5067
KEGG:hsa:5067 UCSC:uc003dpm.1 CTD:5067 GeneCards:GC03M074394
H-InvDB:HIX0003468 HGNC:HGNC:2173 HPA:HPA003341 MIM:601325
neXtProt:NX_Q9P232 PharmGKB:PA26687 InParanoid:Q9P232 KO:K06761
OMA:VHPMSSY OrthoDB:EOG48GW2G EvolutionaryTrace:Q9P232
GenomeRNAi:5067 NextBio:19522 Bgee:Q9P232 CleanEx:HS_CNTN3
Genevestigator:Q9P232 GermOnline:ENSG00000113805 Uniprot:Q9P232
Length = 1028
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 61/194 (31%), Positives = 90/194 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V + +S+ I V+WN I N G L+G+ ++YW EE++
Sbjct: 802 PTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--GHLLGYEVRYWNGGGKEESSSKMKVAG 859
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
A + GL+ + YY V AYN+AG GP S T + P +PP V + T
Sbjct: 860 NETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKTPPSQPPGNV-VWNATDTK 918
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V + W V E + GYKV + S+ N ++ T A++V L + Y +
Sbjct: 919 VLLNWEQVKAMENESEVTGYKVFY----RTSSQNNVQVLNTNKT-SAELV-LPIKEDYII 972
Query: 182 RVLAFSNGGDGRMS 195
V A ++GGDG S
Sbjct: 973 EVKATTDGGDGTSS 986
Score = 161 (61.7 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 51/203 (25%), Positives = 88/203 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPI--ELIRENIRGRLIGHR---IKYWKED--NPEET 53
+P+V P V G + + + +TW+P+ EL G ++ R + W + +T
Sbjct: 699 VPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQTVVTSPDT 758
Query: 54 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 113
Y RN +++ P + Y VKV YNN GEGP S + + P PS V
Sbjct: 759 PRYVF----RNESIV----PYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVS 810
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
++ + + V+W + ++GY+VR W ++ + GN A + L
Sbjct: 811 ANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWN-GGGKEESSSKMKVAGNETSARLRGL 869
Query: 174 SPGKRYHMRVLAFSNGGDGRMSS 196
Y+ V A+++ G G S+
Sbjct: 870 KSNLAYYTAVRAYNSAGAGPFSA 892
>UNIPROTKB|O94779 [details] [associations]
symbol:CNTN5 "Contactin-5" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005886 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0007605 InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047
eggNOG:NOG293951 HOGENOM:HOG000059617 CTD:53942 KO:K06763
OrthoDB:EOG4JWVCR EMBL:AB013802 EMBL:AB013803 EMBL:AP000760
EMBL:AP000798 EMBL:AP000923 EMBL:AP001892 EMBL:AP001988
EMBL:AP002378 EMBL:AP002428 EMBL:AP002987 EMBL:AP003126
EMBL:AP003441 EMBL:AP003558 EMBL:AP004249 EMBL:BC039255
EMBL:BC130619 EMBL:BC144185 IPI:IPI00182438 IPI:IPI00219130
IPI:IPI00982420 RefSeq:NP_001230199.1 RefSeq:NP_055176.1
RefSeq:NP_780775.1 UniGene:Hs.656783 ProteinModelPortal:O94779
SMR:O94779 IntAct:O94779 STRING:O94779 PhosphoSite:O94779
PaxDb:O94779 PRIDE:O94779 Ensembl:ENST00000279463
Ensembl:ENST00000418526 Ensembl:ENST00000524871
Ensembl:ENST00000527185 Ensembl:ENST00000528682 GeneID:53942
KEGG:hsa:53942 UCSC:uc001pfz.3 UCSC:uc021qpc.1
GeneCards:GC11P098925 HGNC:HGNC:2175 HPA:HPA039492 HPA:HPA041223
MIM:607219 neXtProt:NX_O94779 PharmGKB:PA26689 InParanoid:O94779
OMA:SPAADNH ChiTaRS:CNTN5 GenomeRNAi:53942 NextBio:56254
ArrayExpress:O94779 Bgee:O94779 CleanEx:HS_CNTN5
Genevestigator:O94779 GermOnline:ENSG00000149972 Uniprot:O94779
Length = 1100
Score = 217 (81.4 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 61/195 (31%), Positives = 92/195 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + + + I V W I +E++ GR G + YWK+ E+TA +R
Sbjct: 875 PSAAPTDVKATSVSVSEILVAWKHI---KESL-GRPQGFEVGYWKDMEQEDTAETVKTRG 930
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ GL+ +T Y+ V AYN AG GP S T + P + PS + + +
Sbjct: 931 NESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAPSNLRWEQ-QGSQ 989
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V + W V P E ++GYKV + +N +I L A +V L Y +
Sbjct: 990 VSLGWEPVIPLANESEVVGYKVFY----RQEGHSNSQVIET-QKLQA-VVPLPDAGVYII 1043
Query: 182 RVLAFSNGGDGRMSS 196
V A+S GGDG SS
Sbjct: 1044 EVRAYSEGGDGTASS 1058
Score = 148 (57.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 49/202 (24%), Positives = 84/202 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG--RLIGHR---IKYWKEDNPEET-A 54
+P+ AP V R + + W P+ +N G ++ R + WKE + A
Sbjct: 772 VPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSEA 831
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ R + P T + VKV YNN G+GP S+ + + P P+ V
Sbjct: 832 SKFIYRDE-------SVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKA 884
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
++ + + V W+++ S G++V W+ D + +T+ GN + L
Sbjct: 885 TSVSVSEILVAWKHIKESLGRPQ--GFEVGYWK-DMEQEDTAETVKTRGNESFVILTGLE 941
Query: 175 PGKRYHMRVLAFSNGGDGRMSS 196
YH V A++ G G SS
Sbjct: 942 GNTLYHFTVRAYNGAGYGPPSS 963
>ZFIN|ZDB-GENE-060929-776 [details] [associations]
symbol:cntn4 "contactin 4" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-060929-776 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
HOVERGEN:HBG051047 eggNOG:NOG293951 HOGENOM:HOG000059617
OrthoDB:EOG48GW2G CTD:152330 KO:K06762 EMBL:BC124394
IPI:IPI00799570 RefSeq:NP_001073520.1 UniGene:Dr.115399
ProteinModelPortal:Q08C52 SMR:Q08C52 PRIDE:Q08C52 GeneID:571349
KEGG:dre:571349 NextBio:20890523 Bgee:Q08C52 Uniprot:Q08C52
Length = 1028
Score = 216 (81.1 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 56/199 (28%), Positives = 99/199 (49%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP + ++ +++ + V+W + + R++G+ ++YW+++ E+ + +
Sbjct: 805 PGRAPSRLRAKSLSASDVEVSWKALPW--STSKKRVLGYELRYWEKNEKEDASSVLRTVG 862
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
R A+I GL+ + YY+ V AYN AG GP S T + P +PPS V N
Sbjct: 863 NRTLAIIQGLKGSSTYYITVRAYNTAGTGPPSPVVNITTKKPPPSQPPSKVMWNTSNSKI 922
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
+ + W V P E ++GYKV ++ ++ SR N + NT ++ L + Y +
Sbjct: 923 I-LNWEQVKPLENESEVMGYKV-MYRRNR-FSRPN---VMETNTTSVEL-SLPTDEEYII 975
Query: 182 RVLAFSNGGDGRMSSPAIT 200
++ F GG+G SS IT
Sbjct: 976 QIKPFGEGGEGS-SSRQIT 993
Score = 184 (69.8 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 55/207 (26%), Positives = 98/207 (47%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-------WKEDN-PEE 52
+P+V P V G + + + +TW P+ +N G G+ + + W + P
Sbjct: 702 VPKVTPANVSGGGGSRSELVITWEPVPEELQNGAG--FGYVVAFRPFGSTGWMQAAVPSP 759
Query: 53 TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV 112
A Y+ + N ++ P + + VKV AYNN GEGP + + P + PS +
Sbjct: 760 EASKYVFK---NETIL----PFSPFQVKVGAYNNKGEGPFGPVITIYSAEEEPGRAPSRL 812
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD 172
K ++ + V V+W+ + S ++ ++GY++R WE ++ A+ + VGN A I
Sbjct: 813 RAKSLSASDVEVSWKALPWSTSKKRVLGYELRYWEKNEKED-ASSVLRTVGNRTLAIIQG 871
Query: 173 LSPGKRYHMRVLAFSNGGDGRMSSPAI 199
L Y++ V A++ G G SP +
Sbjct: 872 LKGSSTYYITVRAYNTAGTGP-PSPVV 897
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 103 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV 162
+ P PP+++H++ I TT ++WR P PI Y ++ +A T+ V
Sbjct: 598 RGPPGPPTSIHVEEITDTTATLSWR-PGPD-NHSPITAYTIQARTPFSLGWQAVSTVPEV 655
Query: 163 --GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 198
G+ L A +++L+P Y RVLA + G G S P+
Sbjct: 656 VGGSHLTATVIELNPWVEYEFRVLASNAVGTGEPSKPS 693
>UNIPROTKB|P10586 [details] [associations]
symbol:PTPRF "Receptor-type tyrosine-protein phosphatase F"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0004725 "protein tyrosine phosphatase activity" evidence=IDA]
[GO:0005001 "transmembrane receptor protein tyrosine phosphatase
activity" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007185 "transmembrane receptor protein tyrosine
phosphatase signaling pathway" evidence=TAS] [GO:0035335
"peptidyl-tyrosine dephosphorylation" evidence=IDA;TAS]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 SMART:SM00194
GO:GO:0008285 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043525 EMBL:CH471059 GO:GO:0043025 GO:GO:0005768
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0050803
GO:GO:0008201 GO:GO:0007155 GO:GO:0030426 GO:GO:0050775
GO:GO:0051387 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0046627 GO:GO:0042059 GO:GO:0060076 GO:GO:0001960
GO:GO:0042301 eggNOG:COG5599 GO:GO:0007185 EMBL:AL583862
GO:GO:0031345 EMBL:AC092815 KO:K05695 GO:GO:0005001
HOVERGEN:HBG053758 OrthoDB:EOG4BG8V3 CTD:5792 OMA:FTPTIEA
EMBL:Y00815 EMBL:AB177857 EMBL:BC048768 IPI:IPI00107831
IPI:IPI00465186 PIR:S03841 RefSeq:NP_002831.2 RefSeq:NP_569707.2
UniGene:Hs.272062 PDB:1LAR PDB:2DJU PDB:2DN7 PDB:2EDX PDB:2EDY
PDB:2YD5 PDB:2YD8 PDBsum:1LAR PDBsum:2DJU PDBsum:2DN7 PDBsum:2EDX
PDBsum:2EDY PDBsum:2YD5 PDBsum:2YD8 ProteinModelPortal:P10586
SMR:P10586 MINT:MINT-1189049 STRING:P10586 PhosphoSite:P10586
DMDM:226709091 PaxDb:P10586 PRIDE:P10586 DNASU:5792
Ensembl:ENST00000359947 Ensembl:ENST00000372413
Ensembl:ENST00000372414 Ensembl:ENST00000438120 GeneID:5792
KEGG:hsa:5792 UCSC:uc001cjr.3 UCSC:uc001cjs.3 GeneCards:GC01P043990
HGNC:HGNC:9670 HPA:HPA012710 MIM:179590 neXtProt:NX_P10586
PharmGKB:PA34015 InParanoid:P10586 BindingDB:P10586
ChEMBL:CHEMBL3521 ChiTaRS:PTPRF EvolutionaryTrace:P10586
GenomeRNAi:5792 NextBio:22550 PMAP-CutDB:Q5T022 ArrayExpress:P10586
Bgee:P10586 CleanEx:HS_PTPRF Genevestigator:P10586
GermOnline:ENSG00000142949 Uniprot:P10586
Length = 1907
Score = 219 (82.2 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 68/216 (31%), Positives = 93/216 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V ST + V+W P N G + + + Y D + V +S
Sbjct: 606 PSAPPQKVMCVSMGSTTVRVSWVPPPADSRN--GVITQYSVAYEAVDGEDRGRHVVDGIS 663
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W L VGL+ T+Y V V A+ + G GPES L RT P PP V ++ +N
Sbjct: 664 REHSSWDL-VGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKV----------RVWEVDQDMSRANDTIIPV-GNTLDA 168
T VHV W+ PS + I GY+V R + QD+ A P +
Sbjct: 723 TAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPRGLPIIQDVMLAEAQWRPEESEDYET 782
Query: 169 DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
I L+P Y + V A++ GDG S P I G
Sbjct: 783 TISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTG 818
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 50/137 (36%), Positives = 69/137 (50%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 376 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 435
Query: 128 YVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV----DLSPGKRYHMR 182
P E ++ GY+V + D SR NT DA ++ L PG Y +R
Sbjct: 436 ---PPEEPNGLVRGYRV-YYTPD---SRRPPNAWHKHNT-DAGLLTTVGSLLPGITYSLR 487
Query: 183 VLAFSNGGDGRMSSPAI 199
VLAF+ GDG SP I
Sbjct: 488 VLAFTAVGDGP-PSPTI 503
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 15 NSTAINVT---WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
++TA+N W+P + + G L+G+R++Y + D + + + +++ + GL
Sbjct: 829 STTAMNTALLQWHP----PKELPGELLGYRLQYCRADEARPNTIDF-GKDDQHFT-VTGL 882
Query: 72 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 131
T Y ++ A N AG G E E+ + RT P P +H+ G+ +T + W
Sbjct: 883 HKGTTYIFRLAAKNRAGLGEEFEKEI-RTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVL 941
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ II Y V +++ N T TL L P Y ++V A+++ G
Sbjct: 942 AERNGRIISYTVVFRDINSQQELQNITT-DTRFTLTG----LKPDTTYDIKVRAWTSKGS 996
Query: 192 GRMSSPAI 199
G +S P+I
Sbjct: 997 GPLS-PSI 1003
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/200 (25%), Positives = 91/200 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D+ ++ T
Sbjct: 413 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDSRRPPNAWHKHNT 467
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P + + T
Sbjct: 468 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAEVESDT 526
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRY 179
+ ++W + P +E II Y++ W + + + T P + TL+ DL P Y
Sbjct: 527 RIQLSW-LLPP---QERIIMYELVYWAAEDEDQQHKVTFDPTSSYTLE----DLKPDTLY 578
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
++ A S+ G G + +P I
Sbjct: 579 RFQLAARSDMGVG-VFTPTI 597
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y ++ A ++ G G +
Sbjct: 539 RIIMYELVYWAAEDEDQQHKVTF--DPTSSYTL-EDLKPDTLYRFQLAARSDMGVGVFTP 595
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP--IIGYKVRVWEVDQDM 152
RT + P PP V + TTV V+W V P + I Y V VD +
Sbjct: 596 TIEARTAQSTPSAPPQKVMCVSMGSTTVRVSW--VPPPADSRNGVITQYSVAYEAVDGE- 652
Query: 153 SRANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 211
R + + + D+V L Y + V A ++ G G SSP + + +++ S
Sbjct: 653 DRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVL---VRTDEDVPS 709
Query: 212 GSP 214
G P
Sbjct: 710 GPP 712
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + G ++ + W+P L N GR+I + + + ++ N ++ + ++
Sbjct: 914 LPSGFPQNLHVTGLTTSTTELAWDPPVLAERN--GRIISYTVVF-RDINSQQE-LQNITT 969
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TR + GL+PDT Y +KV A+ + G GP S RT Q + T
Sbjct: 970 DTR--FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTM-PVEQVFAKNFRVAAAMKT 1026
Query: 121 TVHVTWRYVSPSFEEE-PI-IGYKVRVWEVD 149
+V ++W V S++ P I Y + EVD
Sbjct: 1027 SVLLSWE-VPDSYKSAVPFKILYNGQSVEVD 1056
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 50/205 (24%), Positives = 83/205 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NSTA++V W P+ G++ G+++ Y + +N E + +
Sbjct: 707 VPSGPPRKVEVEPLNSTAVHVYWKLPVP---SKQHGQIRGYQVTYVRLENGEPRGLPIIQ 763
Query: 60 RTT---RNW---------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 107
W I GL P+T Y V V AY G+G S+ + T P +
Sbjct: 764 DVMLAEAQWRPEESEDYETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTGAVPGR 823
Query: 108 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 167
P + +N T + W P ++GY+++ D+ +R N TI +
Sbjct: 824 PTMMISTTAMN--TALLQWH--PPKELPGELLGYRLQYCRADE--ARPN-TIDFGKDDQH 876
Query: 168 ADIVDLSPGKRYHMRVLAFSNGGDG 192
+ L G Y R+ A + G G
Sbjct: 877 FTVTGLHKGTTYIFRLAAKNRAGLG 901
>UNIPROTKB|G3XAD4 [details] [associations]
symbol:CNTN4 "Contactin 4, isoform CRA_e" species:9606
"Homo sapiens" [GO:0007420 "brain development" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471055 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 EMBL:AC018842 EMBL:AC022002
EMBL:AC022008 EMBL:AC024057 EMBL:AC026882 EMBL:AC066608
EMBL:AC087094 EMBL:AC087427 UniGene:Hs.298705 UniGene:Hs.626418
HGNC:HGNC:2174 ChiTaRS:CNTN4 ProteinModelPortal:G3XAD4 SMR:G3XAD4
Ensembl:ENST00000358480 ArrayExpress:G3XAD4 Bgee:G3XAD4
Uniprot:G3XAD4
Length = 807
Score = 214 (80.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 60/199 (30%), Positives = 93/199 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
P P +F+R ++T I V W +P+E +N RGR+ G+ +KYW+ ++ EE A +
Sbjct: 582 PTKPPASIFARSLSATDIEVFWASPLE---KN-RGRIQGYEVKYWRHEDKEENARKIRTV 637
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ I L+ Y++ V AYN+AG GP S T + P +PP + I + +
Sbjct: 638 GNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNI-IWNSSDS 696
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS--RANDTIIPVGNTLDAD-IVDLSPG 176
+ + W V E + GYKV W S N T + + D D I+++ P
Sbjct: 697 KIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKP- 755
Query: 177 KRYHMRVLAFSNGGDGRMS 195
FS+GGDG S
Sbjct: 756 ---------FSDGGDGSSS 765
Score = 181 (68.8 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 52/199 (26%), Positives = 89/199 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS 59
+P+V P V G + + + +TW E + E ++ GR G+ + + S
Sbjct: 479 LPEVTPANVSGGGGSKSELVITW---ETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS 535
Query: 60 RTTRNWALI-VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
+ + P + + VKV +NN GEGP S + + + P KPP+++ + ++
Sbjct: 536 ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLS 595
Query: 119 PTTVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
T + V W SP + I GY+V+ W + A I VGN I +L
Sbjct: 596 ATDIEVFW--ASPLEKNRGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSV 652
Query: 178 RYHMRVLAFSNGGDGRMSS 196
YH+ V A+++ G G S+
Sbjct: 653 LYHLAVKAYNSAGTGPSSA 671
>UNIPROTKB|F1M2Y2 [details] [associations]
symbol:Ptprd "Protein Ptprd" species:10116 "Rattus
norvegicus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 IPI:IPI00957582
Ensembl:ENSRNOT00000025426 ArrayExpress:F1M2Y2 Uniprot:F1M2Y2
Length = 1692
Score = 218 (81.8 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 60/208 (28%), Positives = 97/208 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--- 58
P PQ + +ST+I V+W P + ++N G + + +KY D + L
Sbjct: 400 PSAPPQDISCTSPSSTSILVSWQPPPVEKQN--GIITEYSLKYAAVDGEDYRPHEILGIP 457
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +N
Sbjct: 458 SDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVN 515
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPG 176
T V V+WR P+ + I GY+V +++ + + + + + D I L P
Sbjct: 516 ATAVKVSWRSPVPNKQHGQIRGYQVHYVKMENGEPKGQPMLKDVMLADAQDMIISGLQPE 575
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 576 TSYSLTVTAYTTKGDGARSKPKLVSTTG 603
Score = 186 (70.5 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E + TTR + GL P +
Sbjct: 128 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEEPYKEIDGI----ATTRY--SVAGLSPYS 179
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 180 DYEFRVVAVNNIGRGPASEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 237
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 238 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 296
Query: 196 S 196
S
Sbjct: 297 S 297
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 42/155 (27%), Positives = 71/155 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V N+TA+ V+W +P+ G++ G+++ Y K +N E L
Sbjct: 501 VPSGPPRKVEVEAVNATAVKVSWRSPVP---NKQHGQIRGYQVHYVKMENGEPKGQPMLK 557
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A +I GLQP+T Y + V AY G+G S+ L T P +P ++
Sbjct: 558 DVMLADAQDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGRPRLVINHTQ 617
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+N T + W +F P+ GY+++ D +
Sbjct: 618 MN--TALIQWHPPVDTFG--PLQGYRLKFGRKDME 648
Score = 128 (50.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/192 (25%), Positives = 78/192 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST++ ++W P L N G + + + Y ++ N + +L
Sbjct: 699 VPTGFPQNLHSEGTTSTSVQISWQPPVLAERN--GVITKYTLLY-RDINVPLLPMEHLIV 755
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+ DT Y VKV A+ + G GP S RT H+K + T
Sbjct: 756 PADTSMTLTGLKSDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQAVFAKNFHVKAVMKT 815
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K V D M D G IV+L P K Y
Sbjct: 816 SVLLSWE-IPENYNSA--MPFKFFVMH-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 866
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 867 FVLTNRGNSAGG 878
>UNIPROTKB|F1M678 [details] [associations]
symbol:Ptprd "Protein Ptprd" species:10116 "Rattus
norvegicus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 IPI:IPI00357941 PRIDE:F1M678
Ensembl:ENSRNOT00000066046 ArrayExpress:F1M678 Uniprot:F1M678
Length = 1773
Score = 218 (81.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 60/208 (28%), Positives = 97/208 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--- 58
P PQ + +ST+I V+W P + ++N G + + +KY D + L
Sbjct: 481 PSAPPQDISCTSPSSTSILVSWQPPPVEKQN--GIITEYSLKYAAVDGEDYRPHEILGIP 538
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +N
Sbjct: 539 SDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVN 596
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPG 176
T V V+WR P+ + I GY+V +++ + + + + + D I L P
Sbjct: 597 ATAVKVSWRSPVPNKQHGQIRGYQVHYVKMENGEPKGQPMLKDVMLADAQDMIISGLQPE 656
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 657 TSYSLTVTAYTTKGDGARSKPKLVSTTG 684
Score = 186 (70.5 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E + TTR + GL P +
Sbjct: 209 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEEPYKEIDGI----ATTRY--SVAGLSPYS 260
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 261 DYEFRVVAVNNIGRGPASEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 318
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 319 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 377
Query: 196 S 196
S
Sbjct: 378 S 378
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/155 (27%), Positives = 71/155 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V N+TA+ V+W +P+ G++ G+++ Y K +N E L
Sbjct: 582 VPSGPPRKVEVEAVNATAVKVSWRSPVP---NKQHGQIRGYQVHYVKMENGEPKGQPMLK 638
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A +I GLQP+T Y + V AY G+G S+ L T P +P ++
Sbjct: 639 DVMLADAQDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGRPRLVINHTQ 698
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+N T + W +F P+ GY+++ D +
Sbjct: 699 MN--TALIQWHPPVDTFG--PLQGYRLKFGRKDME 729
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 49/192 (25%), Positives = 78/192 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST++ ++W P L N G + + + Y ++ N + +L
Sbjct: 780 VPTGFPQNLHSEGTTSTSVQISWQPPVLAERN--GVITKYTLLY-RDINVPLLPMEHLIV 836
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+ DT Y VKV A+ + G GP S RT H+K + T
Sbjct: 837 PADTSMTLTGLKSDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQAVFAKNFHVKAVMKT 896
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K V D M D G IV+L P K Y
Sbjct: 897 SVLLSWE-IPENYNSA--MPFKFFVMH-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 947
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 948 FVLTNRGNSAGG 959
>RGD|621361 [details] [associations]
symbol:Cntn4 "contactin 4" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO;ISS] [GO:0007420 "brain development" evidence=IEP]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=ISO;ISS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:621361 GO:GO:0005886
GO:GO:0005576 GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0045665 GO:GO:0007155
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047
eggNOG:NOG293951 HOGENOM:HOG000059617 GeneTree:ENSGT00550000074380
OrthoDB:EOG48GW2G CTD:152330 KO:K06762 EMBL:U35371 IPI:IPI00209212
RefSeq:NP_446331.1 UniGene:Rn.10117 ProteinModelPortal:Q62845
SMR:Q62845 STRING:Q62845 PhosphoSite:Q62845 PRIDE:Q62845
Ensembl:ENSRNOT00000007788 GeneID:116658 KEGG:rno:116658
InParanoid:Q62845 NextBio:619439 ArrayExpress:Q62845
Genevestigator:Q62845 Uniprot:Q62845
Length = 1026
Score = 215 (80.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 61/199 (30%), Positives = 93/199 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
P P +F+R ++T I V W +PI +N RGR+ G+ +KYW+ D+ EE A +
Sbjct: 801 PTKPPASIFARSLSATDIEVFWASPIG---KN-RGRIQGYEVKYWRHDDKEENARKIRTV 856
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ I L+ + Y++ V AYN+AG GP S T + P +PP + I + +
Sbjct: 857 GNQTSTKITNLKGNALYHLSVKAYNSAGTGPSSAAVNVTTRKPPPSQPPGNI-IWNSSDS 915
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS--RANDTIIPVGNTLDAD-IVDLSPG 176
+ + W V E + GYKV W S N T + + D D I+++ P
Sbjct: 916 KIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKP- 974
Query: 177 KRYHMRVLAFSNGGDGRMS 195
FS+GGDG S
Sbjct: 975 ---------FSDGGDGSSS 984
Score = 193 (73.0 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 56/202 (27%), Positives = 92/202 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS 59
+P+V P V G + + + +TW E + E ++ GR G+ + + S
Sbjct: 698 LPEVTPANVSGGGGSKSELVITW---ETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS 754
Query: 60 RTTRNWALI-VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
+ ++P + + VKV +NN GEGP S L + + P KPP+++ + ++
Sbjct: 755 ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLS 814
Query: 119 PTTVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
T + V W SP + I GY+V+ W D A I VGN I +L
Sbjct: 815 ATDIEVFW--ASPIGKNRGRIQGYEVKYWRHDDKEENARK-IRTVGNQTSTKITNLKGNA 871
Query: 178 RYHMRVLAFSNGGDGRMSSPAI 199
YH+ V A+++ G G SS A+
Sbjct: 872 LYHLSVKAYNSAGTGP-SSAAV 892
>MGI|MGI:1095737 [details] [associations]
symbol:Cntn4 "contactin 4" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0031225 "anchored
to membrane" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISO] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:1095737 GO:GO:0005886 GO:GO:0005576
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031225
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0045665 GO:GO:0007155 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047 eggNOG:NOG293951
HOGENOM:HOG000059617 GeneTree:ENSGT00550000074380 OrthoDB:EOG48GW2G
CTD:152330 KO:K06762 OMA:IEQGTLN ChiTaRS:CNTN4 EMBL:X99043
EMBL:AK036262 EMBL:AK043507 EMBL:AK173340 IPI:IPI00228295
IPI:IPI00480306 IPI:IPI00480571 RefSeq:NP_001103219.1
RefSeq:NP_001103221.1 RefSeq:NP_766592.2 UniGene:Mm.321683
ProteinModelPortal:Q69Z26 SMR:Q69Z26 STRING:Q69Z26 PaxDb:Q69Z26
PRIDE:Q69Z26 Ensembl:ENSMUST00000089208 Ensembl:ENSMUST00000113258
Ensembl:ENSMUST00000113260 Ensembl:ENSMUST00000113261
Ensembl:ENSMUST00000113264 GeneID:269784 KEGG:mmu:269784
UCSC:uc009dcr.2 UCSC:uc009dcu.1 UCSC:uc009dcv.2 InParanoid:Q69Z26
NextBio:393030 Bgee:Q69Z26 CleanEx:MM_CNTN4 Genevestigator:Q69Z26
GermOnline:ENSMUSG00000064293 Uniprot:Q69Z26
Length = 1026
Score = 215 (80.7 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 61/199 (30%), Positives = 92/199 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
P P +F+R ++T I V W +PI +N RGR+ G+ +KYW+ D+ EE A +
Sbjct: 801 PTKPPASIFARSLSATDIEVFWASPIG---KN-RGRIQGYEVKYWRHDDKEENAKKIRTV 856
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ I L+ Y++ V AYN+AG GP S T + P +PP + I + +
Sbjct: 857 GNQTSTKITNLKGSALYHLSVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNI-IWNSSDS 915
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS--RANDTIIPVGNTLDAD-IVDLSPG 176
+ + W V E + GYKV W S N T + + D D I+++ P
Sbjct: 916 KIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKP- 974
Query: 177 KRYHMRVLAFSNGGDGRMS 195
FS+GGDG S
Sbjct: 975 ---------FSDGGDGSSS 984
Score = 192 (72.6 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 54/199 (27%), Positives = 90/199 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS 59
+P+V P V G + + + +TW E + E ++ GR G+ + + S
Sbjct: 698 LPEVTPANVSGGGGSKSELVITW---ETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS 754
Query: 60 RTTRNWALI-VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
+ ++P + + VKV +NN GEGP S L + + P KPP+++ + ++
Sbjct: 755 ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLS 814
Query: 119 PTTVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
T + V W SP + I GY+V+ W D A I VGN I +L
Sbjct: 815 ATDIEVFW--ASPIGKNRGRIQGYEVKYWRHDDKEENAKK-IRTVGNQTSTKITNLKGSA 871
Query: 178 RYHMRVLAFSNGGDGRMSS 196
YH+ V A+++ G G S+
Sbjct: 872 LYHLSVKAYNSAGTGPSSA 890
>UNIPROTKB|G8JL96 [details] [associations]
symbol:PTPRS "Receptor-type tyrosine-protein phosphatase S"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
EMBL:AC022517 EMBL:AC005335 EMBL:AC005790 EMBL:AC005338
EMBL:AC005788 EMBL:AC118535 HGNC:HGNC:9681
ProteinModelPortal:G8JL96 SMR:G8JL96 Ensembl:ENST00000262963
Bgee:G8JL96 Uniprot:G8JL96
Length = 1928
Score = 218 (81.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P E G L+G+ ++Y ++PE V +
Sbjct: 614 PSAPPQDVKCVSVRSTAILVSWRPPP--PETHNGALVGYSVRYRPLGSEDPEPKEVNGIP 671
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L+ T+Y + +A+ G GPES + RT P PP V + +N
Sbjct: 672 PTTTQ-ILLEALEKWTQYRITTVAHTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNA 730
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVD----QDMSRANDTIIP-----VGNTLDADI 170
T + V WR +P + I GY+V ++ + R D ++ +T + ++
Sbjct: 731 TAIRVLWRSPAPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDVMLADAQWETDDTAEYEM 790
Query: 171 V--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
V +L P Y + V A++ GDG S P + G
Sbjct: 791 VITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 826
Score = 168 (64.2 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 55/190 (28%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 341 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 392
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ V W P
Sbjct: 393 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWE--EPVEPN 450
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 451 GLIRGYRV-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 509
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 510 DPIQVKTQQG 519
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R ++T + V W E + N G + G+R+ Y E PE +
Sbjct: 422 PASAPRNVQARMLSATTMIVQWE--EPVEPN--GLIRGYRVYYTME--PEHPVGNWQKHN 475
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + + + +
Sbjct: 476 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-LRAEARSE 534
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ ++W SP +E II Y++ E D T P T + DL P Y
Sbjct: 535 TSITLSW---SPP-RQESIIKYELLFREGDHGRE-VGRTFDP---TTSYVVEDLKPNTEY 586
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
R+ A S G G + P +
Sbjct: 587 AFRLAARSPQGLGAFT-PVV 605
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/195 (23%), Positives = 85/195 (43%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + + + T+I ++W+P +E+I I + + + + D+ E + T+
Sbjct: 524 PMNLRAEARSETSITLSWSPPR--QESI----IKYELLFREGDHGREVGRTFDPTTSY-- 575
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
++ L+P+T+Y ++ A + G G + +RT + P PP V + T + V+
Sbjct: 576 -VVEDLKPNTEYAFRLAARSPQGLGAFTPVVRQRTLQSKPSAPPQDVKCVSVRSTAILVS 634
Query: 126 WRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 184
WR P ++GY VR + +D IP T + L +Y + +
Sbjct: 635 WRPPPPETHNGALVGYSVRYRPLGSEDPEPKEVNGIPP-TTTQILLEALEKWTQYRITTV 693
Query: 185 AFSNGGDGRMSSPAI 199
A + G G SSP +
Sbjct: 694 AHTEVGPGPESSPVV 708
>UNIPROTKB|Q13332 [details] [associations]
symbol:PTPRS "Receptor-type tyrosine-protein phosphatase S"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021766
"hippocampus development" evidence=IEA] [GO:0021987 "cerebral
cortex development" evidence=IEA] [GO:0022038 "corpus callosum
development" evidence=IEA] [GO:0005001 "transmembrane receptor
protein tyrosine phosphatase activity" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0021987 GO:GO:0021766
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155 EMBL:CH471139
GO:GO:0021549 GO:GO:0021510 InterPro:IPR013098 Pfam:PF07679
GO:GO:0022038 eggNOG:COG5599 HOGENOM:HOG000010250 GO:GO:0005001
HOVERGEN:HBG053758 EMBL:U35234 EMBL:U40317 EMBL:AC005335
EMBL:AC005790 EMBL:AC005338 EMBL:AC005788 EMBL:AC118535
EMBL:BC104812 EMBL:BC143287 EMBL:S78080 IPI:IPI00289831
IPI:IPI00293275 IPI:IPI00299590 IPI:IPI00332271 IPI:IPI00332272
IPI:IPI00332273 IPI:IPI00743517 RefSeq:NP_002841.3
RefSeq:NP_570923.2 RefSeq:NP_570924.2 RefSeq:NP_570925.2
UniGene:Hs.644384 PDB:2FH7 PDB:2YD2 PDB:2YD3 PDB:2YD9 PDBsum:2FH7
PDBsum:2YD2 PDBsum:2YD3 PDBsum:2YD9 ProteinModelPortal:Q13332
SMR:Q13332 IntAct:Q13332 MINT:MINT-1349588 STRING:Q13332
PhosphoSite:Q13332 DMDM:50403770 PaxDb:Q13332 PRIDE:Q13332
DNASU:5802 Ensembl:ENST00000348075 Ensembl:ENST00000353284
Ensembl:ENST00000357368 GeneID:5802 KEGG:hsa:5802 UCSC:uc002mbv.3
UCSC:uc002mbw.3 UCSC:uc002mby.3 CTD:5802 GeneCards:GC19M005157
HGNC:HGNC:9681 MIM:601576 neXtProt:NX_Q13332 PharmGKB:PA34026
InParanoid:Q13332 KO:K06778 EvolutionaryTrace:Q13332
GenomeRNAi:5802 NextBio:22612 ArrayExpress:Q13332 Bgee:Q13332
CleanEx:HS_PTPRS Genevestigator:Q13332 GermOnline:ENSG00000105426
Uniprot:Q13332
Length = 1948
Score = 218 (81.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P E G L+G+ ++Y ++PE V +
Sbjct: 618 PSAPPQDVKCVSVRSTAILVSWRPPP--PETHNGALVGYSVRYRPLGSEDPEPKEVNGIP 675
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L+ T+Y + +A+ G GPES + RT P PP V + +N
Sbjct: 676 PTTTQ-ILLEALEKWTQYRITTVAHTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNA 734
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVD----QDMSRANDTIIP-----VGNTLDADI 170
T + V WR +P + I GY+V ++ + R D ++ +T + ++
Sbjct: 735 TAIRVLWRSPAPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDVMLADAQWETDDTAEYEM 794
Query: 171 V--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
V +L P Y + V A++ GDG S P + G
Sbjct: 795 VITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 830
Score = 168 (64.2 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 55/190 (28%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 345 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 396
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ V W P
Sbjct: 397 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWE--EPVEPN 454
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 455 GLIRGYRV-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 513
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 514 DPIQVKTQQG 523
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R ++T + V W E + N G + G+R+ Y E PE +
Sbjct: 426 PASAPRNVQARMLSATTMIVQWE--EPVEPN--GLIRGYRVYYTME--PEHPVGNWQKHN 479
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + + + +
Sbjct: 480 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-LRAEARSE 538
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ ++W SP +E II Y++ E D T P T + DL P Y
Sbjct: 539 TSITLSW---SPP-RQESIIKYELLFREGDHGRE-VGRTFDP---TTSYVVEDLKPNTEY 590
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
R+ A S G G + P +
Sbjct: 591 AFRLAARSPQGLGAFT-PVV 609
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/195 (23%), Positives = 85/195 (43%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + + + T+I ++W+P +E+I I + + + + D+ E + T+
Sbjct: 528 PMNLRAEARSETSITLSWSPPR--QESI----IKYELLFREGDHGREVGRTFDPTTSY-- 579
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
++ L+P+T+Y ++ A + G G + +RT + P PP V + T + V+
Sbjct: 580 -VVEDLKPNTEYAFRLAARSPQGLGAFTPVVRQRTLQSKPSAPPQDVKCVSVRSTAILVS 638
Query: 126 WRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 184
WR P ++GY VR + +D IP T + L +Y + +
Sbjct: 639 WRPPPPETHNGALVGYSVRYRPLGSEDPEPKEVNGIPP-TTTQILLEALEKWTQYRITTV 697
Query: 185 AFSNGGDGRMSSPAI 199
A + G G SSP +
Sbjct: 698 AHTEVGPGPESSPVV 712
>UNIPROTKB|E9PDC5 [details] [associations]
symbol:PTPRS "Receptor-type tyrosine-protein phosphatase S"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
EMBL:AC022517 EMBL:AC005335 EMBL:AC005790 EMBL:AC005338
EMBL:AC005788 EMBL:AC118535 HGNC:HGNC:9681 OMA:TTMIVQW
IPI:IPI00642154 ProteinModelPortal:E9PDC5 SMR:E9PDC5
Ensembl:ENST00000372412 ArrayExpress:E9PDC5 Bgee:E9PDC5
Uniprot:E9PDC5
Length = 1949
Score = 218 (81.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P E G L+G+ ++Y ++PE V +
Sbjct: 619 PSAPPQDVKCVSVRSTAILVSWRPPP--PETHNGALVGYSVRYRPLGSEDPEPKEVNGIP 676
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L+ T+Y + +A+ G GPES + RT P PP V + +N
Sbjct: 677 PTTTQ-ILLEALEKWTQYRITTVAHTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNA 735
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVD----QDMSRANDTIIP-----VGNTLDADI 170
T + V WR +P + I GY+V ++ + R D ++ +T + ++
Sbjct: 736 TAIRVLWRSPAPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDVMLADAQWETDDTAEYEM 795
Query: 171 V--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
V +L P Y + V A++ GDG S P + G
Sbjct: 796 VITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 831
Score = 168 (64.2 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 55/190 (28%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 346 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 397
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ V W P
Sbjct: 398 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIVQWE--EPVEPN 455
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 456 GLIRGYRV-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 514
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 515 DPIQVKTQQG 524
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R ++T + V W E + N G + G+R+ Y E PE +
Sbjct: 427 PASAPRNVQARMLSATTMIVQWE--EPVEPN--GLIRGYRVYYTME--PEHPVGNWQKHN 480
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + + + +
Sbjct: 481 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-LRAEARSE 539
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ ++W SP +E II Y++ E D T P T + DL P Y
Sbjct: 540 TSITLSW---SPP-RQESIIKYELLFREGDHGRE-VGRTFDP---TTSYVVEDLKPNTEY 591
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
R+ A S G G + P +
Sbjct: 592 AFRLAARSPQGLGAFT-PVV 610
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/195 (23%), Positives = 85/195 (43%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + + + T+I ++W+P +E+I I + + + + D+ E + T+
Sbjct: 529 PMNLRAEARSETSITLSWSPPR--QESI----IKYELLFREGDHGREVGRTFDPTTSY-- 580
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
++ L+P+T+Y ++ A + G G + +RT + P PP V + T + V+
Sbjct: 581 -VVEDLKPNTEYAFRLAARSPQGLGAFTPVVRQRTLQSKPSAPPQDVKCVSVRSTAILVS 639
Query: 126 WRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 184
WR P ++GY VR + +D IP T + L +Y + +
Sbjct: 640 WRPPPPETHNGALVGYSVRYRPLGSEDPEPKEVNGIPP-TTTQILLEALEKWTQYRITTV 698
Query: 185 AFSNGGDGRMSSPAI 199
A + G G SSP +
Sbjct: 699 AHTEVGPGPESSPVV 713
>UNIPROTKB|Q7Z5N4 [details] [associations]
symbol:SDK1 "Protein sidekick-1" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 eggNOG:NOG12793 InterPro:IPR013098
Pfam:PF07679 CTD:221935 HOGENOM:HOG000231052 HOVERGEN:HBG080083
OrthoDB:EOG4CNQQ4 EMBL:AY310398 EMBL:AK055987 EMBL:AC004935
EMBL:AC004984 EMBL:AC011284 EMBL:AC015968 EMBL:AC069286
EMBL:AC073316 EMBL:AC073550 EMBL:AC079231 EMBL:AC092427
EMBL:AK074077 EMBL:AK074083 IPI:IPI00784490 IPI:IPI00942650
IPI:IPI01014396 RefSeq:NP_689957.3 UniGene:Hs.653013
ProteinModelPortal:Q7Z5N4 SMR:Q7Z5N4 IntAct:Q7Z5N4
MINT:MINT-1182578 STRING:Q7Z5N4 PhosphoSite:Q7Z5N4 DMDM:296452965
PaxDb:Q7Z5N4 PeptideAtlas:Q7Z5N4 PRIDE:Q7Z5N4
Ensembl:ENST00000404826 GeneID:221935 KEGG:hsa:221935
UCSC:uc003smx.3 UCSC:uc003smz.3 GeneCards:GC07P003307
H-InvDB:HIX0006441 HGNC:HGNC:19307 HPA:HPA011392 MIM:607216
neXtProt:NX_Q7Z5N4 PharmGKB:PA134957188 KO:K16353 OMA:YQISWEV
ChiTaRS:SDK1 GenomeRNAi:221935 NextBio:91498 ArrayExpress:Q7Z5N4
Bgee:Q7Z5N4 CleanEx:HS_SDK1 Genevestigator:Q7Z5N4
GermOnline:ENSG00000146555 Uniprot:Q7Z5N4
Length = 2213
Score = 218 (81.8 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 59/199 (29%), Positives = 92/199 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-R 60
P VAP V R + T++ + W P+ + N +G+RIKYW+ D +S R
Sbjct: 1173 PDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDR 1232
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
R + I L+ +Y +++ A+N G GP SE RT P P V + ++ T
Sbjct: 1233 LEREFT-IEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSST 1291
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ +TW V + I+GYK+ D D I+ +T A + L Y
Sbjct: 1292 QILLTWTSVPEQDQNGLILGYKILFRAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYE 1350
Query: 181 MRVLAFSNGGDGRMSSPAI 199
++VLAF+ G+G S+P I
Sbjct: 1351 LQVLAFTRIGNGVPSTPLI 1369
Score = 201 (75.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 59/207 (28%), Positives = 88/207 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ + + G + +I V W P N G L G+ ++Y P E ++
Sbjct: 768 PSAPPKNIVASGRTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSP 825
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N+ L+ L T+Y ++V AYN AG G S E T + P PP V + +N TT
Sbjct: 826 EVNYCLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTT 885
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD-ADIVDLSPGKRYH 180
+ W F GYK+ W D + TI P + + I +L Y
Sbjct: 886 IQFLWNPPPQQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYF 945
Query: 181 MRVLAFSNGGDGRMSSPAITFQMGEEK 207
VL F+ GDG S+P + + E+K
Sbjct: 946 TSVLCFTTPGDGPPSTPQLVWTQ-EDK 971
Score = 189 (71.6 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 57/187 (30%), Positives = 91/187 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P +APQ V ++ + VTW+P +N G + G++I YW+ D+ ET +
Sbjct: 1701 PAMAPQNVQVTPLTASQLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFL 1758
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ L TKY V + A+N AG+GP+S+ RT++ AP P S + I TT
Sbjct: 1759 PEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAP-SFLAFSEITSTT 1817
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPV-GNTLD-ADIVDLSPGKR 178
++V+W P+ + GY+V V+E + + + + V GN + DL+ G
Sbjct: 1818 LNVSWG--EPAAANGILQGYRV-VYEPLAPVQGVSKVVTVEVRGNWQRWLKVRDLTKGVT 1874
Query: 179 YHMRVLA 185
Y RV A
Sbjct: 1875 YFFRVQA 1881
Score = 175 (66.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 58/209 (27%), Positives = 100/209 (47%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-NPEETAVYYLS 59
+P AP+ V + +ST I +TW + +N G ++G++I + +D +PE +
Sbjct: 1275 VPSAAPENVSAEAVSSTQILLTWTSVPEQDQN--GLILGYKILFRAKDLDPEPRSHIVRG 1332
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 118
T++ AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1333 NHTQS-ALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPG-PPVRLVFPEVR 1390
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGK 177
T+V + W+ P I+GY++ + + S T + VG T+ DL+P
Sbjct: 1391 LTSVRIVWQ--PPEEPNGIILGYQI-AYRLASS-SPHTFTTVEVGATVRQFTATDLAPES 1446
Query: 178 RYHMRVLAFSNGGDGR-MSSPAITFQMGE 205
Y R+ A + G G + + IT + E
Sbjct: 1447 AYIFRLSAKTRQGWGEPLEATVITTEKRE 1475
Score = 161 (61.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 58/205 (28%), Positives = 91/205 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ V + NST I WNP ++ I G G+++ W D PE V ++
Sbjct: 868 VPTAPPQNVQTEAVNSTTIQFLWNPPP--QQFINGINQGYKLLAWPADAPEAVTVVTIAP 925
Query: 61 TTR--NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--G 116
+ I L+ T Y+ V+ + G+GP S L T KP + H+
Sbjct: 926 DFHGVHHGHITNLKKFTAYFTSVLCFTTPGDGPPSTPQLVWTQE---DKPGAVGHLSFTE 982
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSP 175
I T++ V+W+ P + I GY++ WEV ++ SR T+ T + I LS
Sbjct: 983 ILDTSLKVSWQ--EPLEKNGIITGYQIS-WEVYGRNDSRLTHTLN--STTHEYKIQGLSS 1037
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAIT 200
Y + V A + G G ++S I+
Sbjct: 1038 LTTYTIDVAAVTAVGTGLVTSSTIS 1062
Score = 137 (53.3 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 40/157 (25%), Positives = 65/157 (41%)
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
S +T + L+ +Y V + AYN GE P S AP P V + +
Sbjct: 1655 SSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLT 1714
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
+ + VTW P + I GYK+ WE D ++ + + + +L+ +
Sbjct: 1715 ASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPV-VRLKNLTSHTK 1773
Query: 179 YHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y + + AF+ GDG S P Q G + G+P+
Sbjct: 1774 YLVSISAFNAAGDGPKSDP----QQGRTHQAAPGAPS 1806
Score = 51 (23.0 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE 47
+P P V + ++++ + W P E++ G L G+RI Y++E
Sbjct: 1577 VPGEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRI-YYRE 1620
>UNIPROTKB|Q8IWV2 [details] [associations]
symbol:CNTN4 "Contactin-4" species:9606 "Homo sapiens"
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0030424 "axon"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0007413 "axonal fasciculation" evidence=TAS] [GO:0048167
"regulation of synaptic plasticity" evidence=TAS] [GO:0045665
"negative regulation of neuron differentiation" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=TAS] [GO:0007420 "brain development"
evidence=ISS] [GO:0031175 "neuron projection development"
evidence=ISS] [GO:0007158 "neuron cell-cell adhesion" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005886 GO:GO:0007411 GO:GO:0048167
GO:GO:0005576 GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471055 GO:GO:0030424 GO:GO:0031225 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045665 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007413
GO:GO:0007158 Orphanet:1620 HOVERGEN:HBG051047 eggNOG:NOG293951
HOGENOM:HOG000059617 OrthoDB:EOG48GW2G EMBL:AF464063 EMBL:AY090737
EMBL:AF549455 EMBL:AK314396 EMBL:AC018842 EMBL:AC022002
EMBL:AC022008 EMBL:AC024057 EMBL:AC026882 EMBL:AC066608
EMBL:AC087094 EMBL:AC087427 EMBL:BC026119 IPI:IPI00178854
IPI:IPI00479016 IPI:IPI00744041 RefSeq:NP_001193884.1
RefSeq:NP_001193885.1 RefSeq:NP_783200.1 RefSeq:NP_783302.1
UniGene:Hs.298705 UniGene:Hs.626418 ProteinModelPortal:Q8IWV2
SMR:Q8IWV2 IntAct:Q8IWV2 STRING:Q8IWV2 PhosphoSite:Q8IWV2
DMDM:55976529 PaxDb:Q8IWV2 PRIDE:Q8IWV2 Ensembl:ENST00000397459
Ensembl:ENST00000397461 Ensembl:ENST00000418658
Ensembl:ENST00000427331 Ensembl:ENST00000448906 GeneID:152330
KEGG:hsa:152330 UCSC:uc003bpb.1 UCSC:uc003bpc.3 UCSC:uc003bpg.3
CTD:152330 GeneCards:GC03P002117 HGNC:HGNC:2174 HPA:HPA021068
MIM:607280 neXtProt:NX_Q8IWV2 PharmGKB:PA26688 InParanoid:Q8IWV2
KO:K06762 OMA:IEQGTLN ChiTaRS:CNTN4 GenomeRNAi:152330 NextBio:86944
ArrayExpress:Q8IWV2 Bgee:Q8IWV2 CleanEx:HS_CNTN4
Genevestigator:Q8IWV2 GermOnline:ENSG00000144619 Uniprot:Q8IWV2
Length = 1026
Score = 214 (80.4 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 60/199 (30%), Positives = 93/199 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
P P +F+R ++T I V W +P+E +N RGR+ G+ +KYW+ ++ EE A +
Sbjct: 801 PTKPPASIFARSLSATDIEVFWASPLE---KN-RGRIQGYEVKYWRHEDKEENARKIRTV 856
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ I L+ Y++ V AYN+AG GP S T + P +PP + I + +
Sbjct: 857 GNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNI-IWNSSDS 915
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS--RANDTIIPVGNTLDAD-IVDLSPG 176
+ + W V E + GYKV W S N T + + D D I+++ P
Sbjct: 916 KIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEIKP- 974
Query: 177 KRYHMRVLAFSNGGDGRMS 195
FS+GGDG S
Sbjct: 975 ---------FSDGGDGSSS 984
Score = 181 (68.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 52/199 (26%), Positives = 89/199 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS 59
+P+V P V G + + + +TW E + E ++ GR G+ + + S
Sbjct: 698 LPEVTPANVSGGGGSKSELVITW---ETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS 754
Query: 60 RTTRNWALI-VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
+ + P + + VKV +NN GEGP S + + + P KPP+++ + ++
Sbjct: 755 ADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLS 814
Query: 119 PTTVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
T + V W SP + I GY+V+ W + A I VGN I +L
Sbjct: 815 ATDIEVFW--ASPLEKNRGRIQGYEVKYWRHEDKEENARK-IRTVGNQTSTKITNLKGSV 871
Query: 178 RYHMRVLAFSNGGDGRMSS 196
YH+ V A+++ G G S+
Sbjct: 872 LYHLAVKAYNSAGTGPSSA 890
>UNIPROTKB|Q58EX2 [details] [associations]
symbol:SDK2 "Protein sidekick-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 eggNOG:NOG12793 InterPro:IPR013098
Pfam:PF07679 EMBL:AC087301 HOVERGEN:HBG080083 KO:K16353 CTD:54549
EMBL:AC032019 EMBL:AC124804 EMBL:AB040947 EMBL:BC045763
EMBL:BC066363 EMBL:AL137357 EMBL:AK001694 IPI:IPI00384376
IPI:IPI00871145 IPI:IPI00942929 IPI:IPI00963847 PIR:T46428
RefSeq:NP_001138424.1 UniGene:Hs.435719 PDB:1WF5 PDB:1WFN PDB:1WFO
PDB:1WIS PDBsum:1WF5 PDBsum:1WFN PDBsum:1WFO PDBsum:1WIS
ProteinModelPortal:Q58EX2 SMR:Q58EX2 IntAct:Q58EX2 STRING:Q58EX2
PhosphoSite:Q58EX2 DMDM:296452966 PaxDb:Q58EX2 PRIDE:Q58EX2
DNASU:54549 Ensembl:ENST00000388726 Ensembl:ENST00000392650
GeneID:54549 KEGG:hsa:54549 UCSC:uc002jjt.4 UCSC:uc010dfm.3
UCSC:uc010dfn.2 GeneCards:GC17M071330 H-InvDB:HIX0019364
HGNC:HGNC:19308 HPA:HPA014725 MIM:607217 neXtProt:NX_Q58EX2
PharmGKB:PA134981456 EvolutionaryTrace:Q58EX2 GenomeRNAi:54549
NextBio:57007 ArrayExpress:Q58EX2 Bgee:Q58EX2 CleanEx:HS_SDK2
Genevestigator:Q58EX2 GermOnline:ENSG00000069188 Uniprot:Q58EX2
Length = 2172
Score = 216 (81.1 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 57/199 (28%), Positives = 96/199 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-R 60
P +AP V R + T++ + W P+ + N +G++IKY + D +T + + R
Sbjct: 1096 PDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDR 1155
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
R++ I L+ T+Y V+V A+N G GP S+ + RT P P+ V +
Sbjct: 1156 VERDYT-IEDLEEWTEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSS 1214
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ V W V + ++GYKV E D D ++ ++ ++ A + L Y
Sbjct: 1215 SMLVRWSEVPEADRNGLVLGYKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYE 1273
Query: 181 MRVLAFSNGGDGRMSSPAI 199
++VLAF+ GDG S P I
Sbjct: 1274 VQVLAFTRIGDGSPSHPPI 1292
Score = 216 (81.1 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 62/200 (31%), Positives = 88/200 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ V + G + +I + W P +N G L G+ I+Y P ++
Sbjct: 690 PTAPPQNVIASGRTNQSIMIQWQPPPESHQN--GILKGYIIRYCLAGLPVGYQFKNITDA 747
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N L+ L T Y ++V AYN+AG G S + E T + P PP VH + N TT
Sbjct: 748 DVNNLLLEDLIIWTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTT 807
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVD-LSPGKRY 179
+ TW SP F GYK+ WE +Q+ T P +++ V L Y
Sbjct: 808 IRFTWNAPSPQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEY 867
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
VL F+ GDG S+P +
Sbjct: 868 FTSVLCFTTPGDGPRSTPQL 887
Score = 191 (72.3 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 56/188 (29%), Positives = 90/188 (47%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ V G +T ++VTW P L +N G + G++I +W+ T
Sbjct: 1622 VPTAAPRNVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLF 1679
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
N + L T Y V V A+N AG+GP S +T + AP P S+V + T
Sbjct: 1680 LAENSVKLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSAP-SSVKFSELTTT 1738
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPV-GNT-LDADIVDLSPGK 177
+V+V+W +P F + GY++ V+E + + + + V GN+ L + DL+ G
Sbjct: 1739 SVNVSWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGV 1795
Query: 178 RYHMRVLA 185
Y R+ A
Sbjct: 1796 TYRFRIRA 1803
Score = 176 (67.0 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 53/205 (25%), Positives = 96/205 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS- 59
+P V P V + NST I TWN + I G G+++ W+ + EE +
Sbjct: 790 VPTVPPGNVHAEATNSTTIRFTWNAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARP 847
Query: 60 --RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ + + + GL+ T+Y+ V+ + G+GP S L RT+ P P + I
Sbjct: 848 NFQDSIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSTPQLVRTHEDVPG-PVGHLSFSEI 906
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGN-TLDADIVDLSP 175
T++ V+W+ P + + GY++ WE + +R N + + N TL+ + L+
Sbjct: 907 LDTSLKVSWQ--EPGEKNGILTGYRIS-WE---EYNRTNTRVTHYLPNVTLEYRVTGLTA 960
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAIT 200
Y + V A ++ G G++S+ I+
Sbjct: 961 LTTYTIEVAAMTSKGQGQVSASTIS 985
Score = 140 (54.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 47/175 (26%), Positives = 75/175 (42%)
Query: 27 ELIRENIRG---RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 83
EL+ E +RG R I + W E ++ LSR + + L +Y +++
Sbjct: 1543 ELLYEGLRGFTLRGINNPGATWAELT-SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSV 1601
Query: 84 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 143
YN GEGP S P P V + G T + VTW + I GYK+
Sbjct: 1602 YNAVGEGPSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQNGDIQGYKI 1661
Query: 144 RVWEVDQ-DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 197
WE + +++ T+ N++ + +L+ Y + V AF+ GDG S+P
Sbjct: 1662 YFWEAQRGNLTERVKTLFLAENSVK--LKNLTGYTAYMVSVAAFNAAGDGPRSTP 1714
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/202 (21%), Positives = 86/202 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P V + S+++ V W+ + N G ++G+++ Y ++D+ + + +
Sbjct: 1198 VPSSGPTNVSALATTSSSMLVRWSEVPEADRN--GLVLGYKVMYKEKDSDTQPRFWLVEG 1255
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 119
+ A + GL Y V+V+A+ G+G P LERT P PP + +
Sbjct: 1256 NSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRT 1314
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKV--RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
T+V + W+ P+ I+ Y++ R+ + + + + P A L P
Sbjct: 1315 TSVRLIWQ--PPAAPNGIILAYQITHRLNTTTANTATV-EVLAPSARQYTA--TGLKPES 1369
Query: 178 RYHMRVLAFSNGGDGRMSSPAI 199
Y R+ A + G G + +
Sbjct: 1370 VYLFRITAQTRKGWGEAAEALV 1391
Score = 54 (24.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY 44
P AP + +T++ + W P + I G L+G RI+Y
Sbjct: 1501 PDEAPTILSVTPHTTTSVLIRWQPPA--EDKINGILLGFRIRY 1541
>UNIPROTKB|F1N888 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:AADN02062013 EMBL:AADN02062012
IPI:IPI00585421 Ensembl:ENSGALT00000016340 ArrayExpress:F1N888
Uniprot:F1N888
Length = 1897
Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 59/207 (28%), Positives = 96/207 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ + STAI V+W P +N G L G+ + Y++ + E+T + ++
Sbjct: 601 PSAPPQDIKCVSTRSTAILVSWRPPPAESQN--GVLAGYSV-YYRALDSEDTELKEVNDI 657
Query: 62 --TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
T + L+ L+ T+Y + V+A+ G GPES + RT P PP V ++ +N
Sbjct: 658 PPTTSQILLESLEKWTEYRITVVAHTEVGPGPESSPVIVRTDEDVPSAPPRKVEVEVLNS 717
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T + V WR + + I GY+V ++ +R I I + + + I L P
Sbjct: 718 TAIQVFWRSPVQNRQHGQIRGYQVHYVRMENGEARGLPQIKDIMLADAQEMVIAGLQPET 777
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 778 AYSITVAAYTMKGDGARSKPKVVTTKG 804
Score = 173 (66.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 328 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 379
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY-VSPSFE 134
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W V P+ +
Sbjct: 380 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQGRMLSSTTMIIQWEEPVEPNGQ 439
Query: 135 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GY+V + ++ D +N V ++L + L + Y +RVLAF++ GDG +
Sbjct: 440 ---IRGYRV-YYTMEPDQPVSNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPL 495
Query: 195 SSPA-ITFQMG 204
S P + Q G
Sbjct: 496 SDPIQVKTQQG 506
Score = 153 (58.9 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 48/155 (30%), Positives = 76/155 (49%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NSTAI V W +P++ R++ G++ G+++ Y + +N E + +
Sbjct: 702 VPSAPPRKVEVEVLNSTAIQVFWRSPVQN-RQH--GQIRGYQVHYVRMENGEARGLPQIK 758
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A +I GLQP+T Y + V AY G+G S+ + T P KP +VH
Sbjct: 759 DIMLADAQEMVIAGLQPETAYSITVAAYTMKGDGARSKPKVVTTKGAVPGKPILSVHQTE 818
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
N T+ V W P E +IGY+++ D D
Sbjct: 819 EN--TLLVKWE--PPLDAEGQVIGYRLQFGRKDVD 849
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/197 (24%), Positives = 84/197 (42%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + T+I ++W+P R+ I ++ + + + + D+ E + T+
Sbjct: 511 PMNFRAEAKTETSIVLSWSPP---RQEI---IVKYELLFKEGDHGREVPRNFEPTTSFT- 563
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
+ GL+P+T+Y ++ A + G G + ERT + P PP + T + V+
Sbjct: 564 --VEGLKPNTEYVFRLAARSALGLGAFTPEVRERTLQSKPSAPPQDIKCVSTRSTAILVS 621
Query: 126 WRYVSPSFEEEPIIGYKV--RVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 182
WR + + GY V R + D ++ ND IP T + L Y +
Sbjct: 622 WRPPPAESQNGVLAGYSVYYRALDSEDTELKEVND--IPP-TTSQILLESLEKWTEYRIT 678
Query: 183 VLAFSNGGDGRMSSPAI 199
V+A + G G SSP I
Sbjct: 679 VVAHTEVGPGPESSPVI 695
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 46/198 (23%), Positives = 83/198 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P+ PQ + + S ++ W P L N G ++ + + Y + +P L
Sbjct: 900 IPKGYPQILEASNITSMSVQFGWLPPVLAERN--GAIVKYTVAYREAGSPGNPLEKDLPP 957
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ N + GL+P+T Y VK+ A+ + G GP S RT++ P +K + T
Sbjct: 958 SPENSYTLNGLKPNTAYDVKIRAHTSKGPGPYSPTVQYRTFQLDQAVLPKNFKVKMVTKT 1017
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + P P YK++ ++ D+ G T I +L P Y+
Sbjct: 1018 SVLLSWEF--PENYNSPT-PYKIQYNGLNVDVD---------GRTTKKLITNLKPHTFYN 1065
Query: 181 MRVLAFSNGGDGRMSSPA 198
++ N G + A
Sbjct: 1066 FVLMNRGNSMGGLQQNVA 1083
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 51/193 (26%), Positives = 86/193 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V R +ST + + W E + N G++ G+R+ Y E P++ +
Sbjct: 409 PASAPRNVQGRMLSSTTMIIQWE--EPVEPN--GQIRGYRVYYTME--PDQPVSNWQKHN 462
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + +
Sbjct: 463 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-FRAEAKTE 521
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ ++W SP +E I+ Y++ E D + P T + L P Y
Sbjct: 522 TSIVLSW---SPP-RQEIIVKYELLFKEGDHGREVPRN-FEP---TTSFTVEGLKPNTEY 573
Query: 180 HMRVLAFSNGGDG 192
R+ A S G G
Sbjct: 574 VFRLAARSALGLG 586
Score = 36 (17.7 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 173 LSPGKRYHMRVLA 185
L PG+RY + +LA
Sbjct: 1205 LEPGQRYVIFILA 1217
>UNIPROTKB|F1NWE4 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021766
"hippocampus development" evidence=IEA] [GO:0021987 "cerebral
cortex development" evidence=IEA] [GO:0022038 "corpus callosum
development" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 OMA:TTMIVQW EMBL:AADN02062013
EMBL:AADN02062012 IPI:IPI00591365 Ensembl:ENSGALT00000006442
ArrayExpress:F1NWE4 Uniprot:F1NWE4
Length = 1904
Score = 215 (80.7 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 59/207 (28%), Positives = 96/207 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ + STAI V+W P +N G L G+ + Y++ + E+T + ++
Sbjct: 604 PSAPPQDIKCVSTRSTAILVSWRPPPAESQN--GVLAGYSV-YYRALDSEDTELKEVNDI 660
Query: 62 --TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
T + L+ L+ T+Y + V+A+ G GPES + RT P PP V ++ +N
Sbjct: 661 PPTTSQILLESLEKWTEYRITVVAHTEVGPGPESSPVIVRTDEDVPSAPPRKVEVEVLNS 720
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T + V WR + + I GY+V ++ +R I I + + + I L P
Sbjct: 721 TAIQVFWRSPVQNRQHGQIRGYQVHYVRMENGEARGLPQIKDIMLADAQEMVIAGLQPET 780
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 781 AYSITVAAYTMKGDGARSKPKVVTTKG 807
Score = 173 (66.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 331 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 382
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY-VSPSFE 134
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W V P+ +
Sbjct: 383 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQGRMLSSTTMIIQWEEPVEPNGQ 442
Query: 135 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GY+V + ++ D +N V ++L + L + Y +RVLAF++ GDG +
Sbjct: 443 ---IRGYRV-YYTMEPDQPVSNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPL 498
Query: 195 SSPA-ITFQMG 204
S P + Q G
Sbjct: 499 SDPIQVKTQQG 509
Score = 153 (58.9 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 48/155 (30%), Positives = 76/155 (49%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NSTAI V W +P++ R++ G++ G+++ Y + +N E + +
Sbjct: 705 VPSAPPRKVEVEVLNSTAIQVFWRSPVQN-RQH--GQIRGYQVHYVRMENGEARGLPQIK 761
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A +I GLQP+T Y + V AY G+G S+ + T P KP +VH
Sbjct: 762 DIMLADAQEMVIAGLQPETAYSITVAAYTMKGDGARSKPKVVTTKGAVPGKPILSVHQTE 821
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
N T+ V W P E +IGY+++ D D
Sbjct: 822 EN--TLLVKWE--PPLDAEGQVIGYRLQFGRKDVD 852
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 48/197 (24%), Positives = 84/197 (42%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + T+I ++W+P R+ I ++ + + + + D+ E + T+
Sbjct: 514 PMNFRAEAKTETSIVLSWSPP---RQEI---IVKYELLFKEGDHGREVPRNFEPTTSFT- 566
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
+ GL+P+T+Y ++ A + G G + ERT + P PP + T + V+
Sbjct: 567 --VEGLKPNTEYVFRLAARSALGLGAFTPEVRERTLQSKPSAPPQDIKCVSTRSTAILVS 624
Query: 126 WRYVSPSFEEEPIIGYKV--RVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 182
WR + + GY V R + D ++ ND IP T + L Y +
Sbjct: 625 WRPPPAESQNGVLAGYSVYYRALDSEDTELKEVND--IPP-TTSQILLESLEKWTEYRIT 681
Query: 183 VLAFSNGGDGRMSSPAI 199
V+A + G G SSP I
Sbjct: 682 VVAHTEVGPGPESSPVI 698
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 46/198 (23%), Positives = 83/198 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P+ PQ + + S ++ W P L N G ++ + + Y + +P L
Sbjct: 903 IPKGYPQILEASNITSMSVQFGWLPPVLAERN--GAIVKYTVAYREAGSPGNPLEKDLPP 960
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ N + GL+P+T Y VK+ A+ + G GP S RT++ P +K + T
Sbjct: 961 SPENSYTLNGLKPNTAYDVKIRAHTSKGPGPYSPTVQYRTFQLDQAVLPKNFKVKMVTKT 1020
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + P P YK++ ++ D+ G T I +L P Y+
Sbjct: 1021 SVLLSWEF--PENYNSPT-PYKIQYNGLNVDVD---------GRTTKKLITNLKPHTFYN 1068
Query: 181 MRVLAFSNGGDGRMSSPA 198
++ N G + A
Sbjct: 1069 FVLMNRGNSMGGLQQNVA 1086
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 51/193 (26%), Positives = 86/193 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V R +ST + + W E + N G++ G+R+ Y E P++ +
Sbjct: 412 PASAPRNVQGRMLSSTTMIIQWE--EPVEPN--GQIRGYRVYYTME--PDQPVSNWQKHN 465
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + +
Sbjct: 466 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-FRAEAKTE 524
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ ++W SP +E I+ Y++ E D + P T + L P Y
Sbjct: 525 TSIVLSW---SPP-RQEIIVKYELLFKEGDHGREVPRN-FEP---TTSFTVEGLKPNTEY 576
Query: 180 HMRVLAFSNGGDG 192
R+ A S G G
Sbjct: 577 VFRLAARSALGLG 589
Score = 36 (17.7 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 173 LSPGKRYHMRVLA 185
L PG+RY + +LA
Sbjct: 1208 LEPGQRYVIFILA 1220
>UNIPROTKB|F1SMP3 [details] [associations]
symbol:PTPRD "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS50055 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0004725 GO:GO:0035335
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00590000082937
EMBL:CU633291 Ensembl:ENSSSCT00000005726 OMA:RSANIVM Uniprot:F1SMP3
Length = 1342
Score = 210 (79.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 63/218 (28%), Positives = 102/218 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW----KEDNPEETAVYY 57
P PQ + +ST+I V+W P + ++N G + + IKY ++D P E +
Sbjct: 481 PSAPPQDISCTSPSSTSILVSWQPPPVEKQN--GIITEYSIKYTAVDGEDDKPHEI-LGI 537
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +
Sbjct: 538 PSDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAV 595
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---------GNTLDA 168
N T+V V+WR P+ + I GY+V ++ + + V +T +
Sbjct: 596 NSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDDTTEH 655
Query: 169 DIV--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
D++ L P Y + V A++ GDG S P + G
Sbjct: 656 DMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTG 693
Score = 187 (70.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 208 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEEPYKEIDGV----ATTRY--SVAGLSPYS 259
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 260 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 317
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 318 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 376
Query: 196 S 196
S
Sbjct: 377 S 377
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 43/164 (26%), Positives = 74/164 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEET------ 53
+P P+ V NST++ V+W +P+ G++ G+++ Y + +N E
Sbjct: 582 VPSGPPRKVEVEAVNSTSVKVSWRSPVP---NKQHGQIRGYQVHYVRMENGEPKGQPMLK 638
Query: 54 ------AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 107
A + TT + +I GLQP+T Y + V AY G+G S+ L T P K
Sbjct: 639 DVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGK 698
Query: 108 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
P ++ +N T + W +F P+ GY+++ D +
Sbjct: 699 PRLVINHTQMN--TALIQWHPPVDTFG--PLQGYRLKFGRKDME 738
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 49/192 (25%), Positives = 81/192 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST++ ++W P L N G + + + Y ++ N + L
Sbjct: 789 VPTGFPQNLHSEGTTSTSVQLSWQPPVLAERN--GIITKYTLLY-RDINTPLLPMEQLII 845
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+PDT Y VKV A+ + G GP S RT H+K + T
Sbjct: 846 PADTTMTLSGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQAVFAKNFHVKAVMKT 905
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K+ +++ D M D G IV+L P K Y
Sbjct: 906 SVLLSWE-IPENYNSA--MPFKI-LYD-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 955
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 956 FVLTNRGNSAGG 967
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 45/199 (22%), Positives = 86/199 (43%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P+ V + +TA+ + W+P + G L G+R+K+ ++D T + + +
Sbjct: 699 PRLVINHTQMNTAL-IQWHP----PVDTFGPLQGYRLKFGRKDMEPLTTLEFSEKEDHFT 753
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
A + Y ++ A N G G E + + + P P +H +G T+V ++
Sbjct: 754 A--TDIHKGASYIFRLSARNKVGFGEEMVKEIS-VPEEVPTGFPQNLHSEGTTSTSVQLS 810
Query: 126 WRYVSPSFEEEP--IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
W+ P E I Y + +++ + IIP T+ + L P Y ++V
Sbjct: 811 WQ--PPVLAERNGIITKYTLLYRDINTPLLPMEQLIIPADTTMT--LSGLKPDTTYDVKV 866
Query: 184 LAFSNGGDGRMSSPAITFQ 202
A ++ G G S P++ F+
Sbjct: 867 RAHTSKGPGPYS-PSVQFR 884
>UNIPROTKB|G3XAE2 [details] [associations]
symbol:PTPRD "Receptor-type tyrosine-protein phosphatase
delta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
EMBL:CH471071 GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098
Pfam:PF07679 EMBL:AL137125 EMBL:AL356584 EMBL:AL445926
EMBL:AL583805 EMBL:AL590397 UniGene:Hs.446083 HGNC:HGNC:9668
ChiTaRS:PTPRD EMBL:AL133479 EMBL:AL135790 EMBL:AL137069
EMBL:AL137851 EMBL:AL157826 EMBL:AL353638 EMBL:AL353733
EMBL:AL354722 EMBL:AL356054 EMBL:AL390723 EMBL:AL391864
EMBL:AL441884 EMBL:AL451130 EMBL:AL513422 EMBL:AL590307
EMBL:AL591133 EMBL:AL591622 EMBL:AL596451 EMBL:AL669908
ProteinModelPortal:G3XAE2 SMR:G3XAE2 PRIDE:G3XAE2
Ensembl:ENST00000360074 ArrayExpress:G3XAE2 Bgee:G3XAE2
Uniprot:G3XAE2
Length = 1899
Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 63/218 (28%), Positives = 102/218 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW----KEDNPEETAVYY 57
P PQ + +ST+I V+W P + ++N G + + IKY ++D P E +
Sbjct: 596 PSAPPQDISCTSPSSTSILVSWQPPPVEKQN--GIITEYSIKYTAVDGEDDKPHEI-LGI 652
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +
Sbjct: 653 PSDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAV 710
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---------GNTLDA 168
N T+V V+WR P+ + I GY+V ++ + + V +T +
Sbjct: 711 NSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDDTTEH 770
Query: 169 DIV--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
D++ L P Y + V A++ GDG S P + G
Sbjct: 771 DMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTG 808
Score = 184 (69.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 323 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEELYKEIDGV----ATTRY--SVAGLSPYS 374
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 375 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 432
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 433 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 491
Query: 196 S 196
S
Sbjct: 492 S 492
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 43/164 (26%), Positives = 74/164 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEET------ 53
+P P+ V NST++ V+W +P+ G++ G+++ Y + +N E
Sbjct: 697 VPSGPPRKVEVEAVNSTSVKVSWRSPVP---NKQHGQIRGYQVHYVRMENGEPKGQPMLK 753
Query: 54 ------AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 107
A + TT + +I GLQP+T Y + V AY G+G S+ L T P K
Sbjct: 754 DVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGK 813
Query: 108 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
P ++ +N T + W +F P+ GY+++ D +
Sbjct: 814 PRLVINHTQMN--TALIQWHPPVDTFG--PLQGYRLKFGRKDME 853
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/192 (26%), Positives = 82/192 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST++ ++W P L N G + + + Y ++ N + L
Sbjct: 904 VPTGFPQNLHSEGTTSTSVQLSWQPPVLAERN--GIITKYTLLY-RDINIPLLPMEQLIV 960
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+PDT Y VKV A+ + G GP S RT Q H+K + T
Sbjct: 961 PADTTMTLTGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTL-PVDQVFAKNFHVKAVMKT 1019
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K+ +++ D M D G IV+L P K Y
Sbjct: 1020 SVLLSWE-IPENYNSA--MPFKI-LYD-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 1069
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 1070 FVLTNRGNSAGG 1081
>UNIPROTKB|P23468 [details] [associations]
symbol:PTPRD "Receptor-type tyrosine-protein phosphatase
delta" species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0006470 "protein dephosphorylation" evidence=TAS]
[GO:0005001 "transmembrane receptor protein tyrosine phosphatase
activity" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006796 "phosphate-containing compound metabolic
process" evidence=NAS] [GO:0007185 "transmembrane receptor protein
tyrosine phosphatase signaling pathway" evidence=TAS] [GO:0007157
"heterophilic cell-cell adhesion" evidence=ISS] [GO:0030182 "neuron
differentiation" evidence=ISS] [GO:0050775 "positive regulation of
dendrite morphogenesis" evidence=ISS] [GO:0097105 "presynaptic
membrane assembly" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030182 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 GO:GO:0005102 GO:GO:0050775 GO:GO:0050839
GO:GO:0007157 InterPro:IPR013098 Pfam:PF07679 eggNOG:COG5599
GO:GO:0007185 GO:GO:0097105 HOGENOM:HOG000010250 GO:GO:0005001
HOVERGEN:HBG053758 EMBL:L38929 EMBL:AL137125 EMBL:AL356584
EMBL:AL445926 EMBL:AL583805 EMBL:AL590397 EMBL:BC106713
EMBL:BC106714 EMBL:BC106715 EMBL:X54133 IPI:IPI00219860
IPI:IPI00796452 IPI:IPI00852829 IPI:IPI00872363 IPI:IPI00946346
IPI:IPI00954886 PIR:A56178 RefSeq:NP_001164496.1 RefSeq:NP_002830.1
RefSeq:NP_569075.2 RefSeq:NP_569076.2 UniGene:Hs.446083 PDB:1X5Z
PDB:2DLH PDB:2YD6 PDB:2YD7 PDBsum:1X5Z PDBsum:2DLH PDBsum:2YD6
PDBsum:2YD7 ProteinModelPortal:P23468 SMR:P23468 DIP:DIP-17023N
IntAct:P23468 MINT:MINT-1350159 STRING:P23468 PhosphoSite:P23468
DMDM:1709906 PaxDb:P23468 PRIDE:P23468 Ensembl:ENST00000355233
Ensembl:ENST00000356435 Ensembl:ENST00000381196
Ensembl:ENST00000397606 Ensembl:ENST00000486161
Ensembl:ENST00000540109 GeneID:5789 KEGG:hsa:5789 UCSC:uc003zkk.3
CTD:5789 GeneCards:GC09M008307 HGNC:HGNC:9668 HPA:CAB026474
MIM:601598 neXtProt:NX_P23468 PharmGKB:PA34013 InParanoid:P23468
KO:K06777 OMA:GYYIVIV OrthoDB:EOG4BG8V3 ChiTaRS:PTPRD
EvolutionaryTrace:P23468 GenomeRNAi:5789 NextBio:22528
ArrayExpress:P23468 Bgee:P23468 CleanEx:HS_PTPRD
Genevestigator:P23468 GermOnline:ENSG00000153707 Uniprot:P23468
Length = 1912
Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 63/218 (28%), Positives = 102/218 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW----KEDNPEETAVYY 57
P PQ + +ST+I V+W P + ++N G + + IKY ++D P E +
Sbjct: 609 PSAPPQDISCTSPSSTSILVSWQPPPVEKQN--GIITEYSIKYTAVDGEDDKPHEI-LGI 665
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +
Sbjct: 666 PSDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTNEDVPSGPPRKVEVEAV 723
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---------GNTLDA 168
N T+V V+WR P+ + I GY+V ++ + + V +T +
Sbjct: 724 NSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDDTTEH 783
Query: 169 DIV--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
D++ L P Y + V A++ GDG S P + G
Sbjct: 784 DMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTG 821
Score = 184 (69.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 336 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEELYKEIDGV----ATTRY--SVAGLSPYS 387
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 388 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 445
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 446 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 504
Query: 196 S 196
S
Sbjct: 505 S 505
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 43/164 (26%), Positives = 74/164 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEET------ 53
+P P+ V NST++ V+W +P+ G++ G+++ Y + +N E
Sbjct: 710 VPSGPPRKVEVEAVNSTSVKVSWRSPVP---NKQHGQIRGYQVHYVRMENGEPKGQPMLK 766
Query: 54 ------AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 107
A + TT + +I GLQP+T Y + V AY G+G S+ L T P K
Sbjct: 767 DVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGK 826
Query: 108 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
P ++ +N T + W +F P+ GY+++ D +
Sbjct: 827 PRLVINHTQMN--TALIQWHPPVDTFG--PLQGYRLKFGRKDME 866
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 50/192 (26%), Positives = 82/192 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST++ ++W P L N G + + + Y ++ N + L
Sbjct: 917 VPTGFPQNLHSEGTTSTSVQLSWQPPVLAERN--GIITKYTLLY-RDINIPLLPMEQLIV 973
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+PDT Y VKV A+ + G GP S RT Q H+K + T
Sbjct: 974 PADTTMTLTGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTL-PVDQVFAKNFHVKAVMKT 1032
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K+ +++ D M D G IV+L P K Y
Sbjct: 1033 SVLLSWE-IPENYNSA--MPFKI-LYD-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 1082
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 1083 FVLTNRGNSAGG 1094
>UNIPROTKB|F1P3U6 [details] [associations]
symbol:CNTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00550000074380 OMA:IEQGTLN EMBL:AADN02014468
EMBL:AADN02014466 EMBL:AADN02014467 IPI:IPI00577270
ProteinModelPortal:F1P3U6 Ensembl:ENSGALT00000013444 Uniprot:F1P3U6
Length = 1016
Score = 207 (77.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 60/199 (30%), Positives = 91/199 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENI-RGRLIGHRIKYWKEDNPEETAVYYLSR 60
P AP V +R ++T I ++W P REN +GR+ G+ ++ W+ D EE A +
Sbjct: 790 PTRAPITVLARSLSATDIEISWAPP---RENQHKGRIQGYEVRCWRHDEKEENARKIRTV 846
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ A + LQ + Y++ V AYN AG GP S T + P +PP + I + +
Sbjct: 847 GNQTSAKVTNLQGNALYHLAVKAYNTAGTGPSSAMVNVTTKKPPPSQPPGNI-IWNSSDS 905
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS--RANDTIIPVGNTLDAD-IVDLSPG 176
+ + W V E + GYKV W S N T + + D D I+++ P
Sbjct: 906 KIILNWDQVKALDNESEVRGYKVLYRWNRQSSASVIETNRTSVELSLPFDEDYIIEIKP- 964
Query: 177 KRYHMRVLAFSNGGDGRMS 195
FS+GGDG S
Sbjct: 965 ---------FSDGGDGSSS 974
Score = 174 (66.3 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 55/202 (27%), Positives = 86/202 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN--PIELIRENIRGRLIGHR----IKYWKEDNPEETA 54
+P+V P V G + + + +TW P EL G ++ R I + + A
Sbjct: 687 LPEVTPANVSGGGGSKSELVITWETVPEELQNGGGFGYVVAFRPFGTISWMQTVVASPDA 746
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
Y+ R L P + Y VKV YNN GEG S + + P + P V
Sbjct: 747 SRYVFRNE-------SLPPFSPYEVKVGVYNNKGEGSFSPVTVVYSAEPEPTRAPITVLA 799
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
+ ++ T + ++W + + I GY+VR W D+ A I VGN A + +L
Sbjct: 800 RSLSATDIEISWAPPRENQHKGRIQGYEVRCWRHDEKEENARK-IRTVGNQTSAKVTNLQ 858
Query: 175 PGKRYHMRVLAFSNGGDGRMSS 196
YH+ V A++ G G S+
Sbjct: 859 GNALYHLAVKAYNTAGTGPSSA 880
>UNIPROTKB|E2RE81 [details] [associations]
symbol:PTPRF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
InterPro:IPR013098 Pfam:PF07679 KO:K05695
GeneTree:ENSGT00590000082937 CTD:5792 OMA:FTPTIEA EMBL:AAEX03009807
GeneID:475389 KEGG:cfa:475389 RefSeq:XP_532613.2
Ensembl:ENSCAFT00000008255 Uniprot:E2RE81
Length = 1906
Score = 210 (79.0 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 65/216 (30%), Positives = 93/216 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V ST + V+W P N G + + + Y D + V +S
Sbjct: 606 PSAPPQKVTCVSTGSTTVRVSWVPPPAASRN--GVITQYSVAYEAVDGEDRGRHVVESIS 663
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W L VGL+ T+Y V V A+ + G GPES L RT P PP V ++ +N
Sbjct: 664 REHSSWDL-VGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVD----------QDMSRANDTIIPV-GNTLDA 168
T V V+W+ PS + I GY+V ++ QD+ A P +
Sbjct: 723 TAVRVSWKLPVPSKQHGQIRGYQVTYVRLENGEPRGPPIIQDVMLAEAQWRPEESEDYET 782
Query: 169 DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
I L+P Y + V A++ GDG S P + G
Sbjct: 783 IISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTG 818
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 46/134 (34%), Positives = 67/134 (50%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 376 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 435
Query: 128 YVSPSFEEEPII-GYKVRVW-EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 185
P E ++ GY+V + + +S + G L + L PG Y +RVLA
Sbjct: 436 ---PPEEPNGLVRGYRVYYTPDARRPLSAWHKHNTDAG--LLTTVGSLLPGITYSLRVLA 490
Query: 186 FSNGGDGRMSSPAI 199
F+ GDG SP I
Sbjct: 491 FTAVGDGP-PSPTI 503
Score = 150 (57.9 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 51/200 (25%), Positives = 91/200 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D + ++ T
Sbjct: 413 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDARRPLSAWHKHNT 467
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P + + T
Sbjct: 468 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAEAESDT 526
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRY 179
+ ++W + P +E II Y++ W + + + T P + TL+ DL P Y
Sbjct: 527 RIQLSW-LLPP---QERIIKYELVYWAAEDEGQQHKVTFDPTSSYTLE----DLKPDTLY 578
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
H ++ A S G G + +P +
Sbjct: 579 HFQLAARSEMGVG-VFTPTV 597
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 49/182 (26%), Positives = 80/182 (43%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y+ ++ A + G G +
Sbjct: 539 RIIKYELVYWAAEDEGQQHKVTF--DPTSSYTL-EDLKPDTLYHFQLAARSEMGVGVFTP 595
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG-YKVRVWEVDQDMS 153
RT + P PP V TTV V+W P+ +I Y V VD +
Sbjct: 596 TVEARTAQSTPSAPPQKVTCVSTGSTTVRVSW-VPPPAASRNGVITQYSVAYEAVDGE-D 653
Query: 154 RANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 212
R + + + D+V L Y + V A ++ G G SSP + + +++ SG
Sbjct: 654 RGRHVVESISREHSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVL---VRTDEDVPSG 710
Query: 213 SP 214
P
Sbjct: 711 PP 712
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/214 (23%), Positives = 85/214 (39%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETA---VY 56
+P P+ V NSTA+ V+W P+ G++ G+++ Y + +N E +
Sbjct: 707 VPSGPPRKVEVEPLNSTAVRVSWKLPVP---SKQHGQIRGYQVTYVRLENGEPRGPPIIQ 763
Query: 57 YLSRTTRNW---------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 107
+ W +I GL P+T Y + V AY G+G S+ + T P +
Sbjct: 764 DVMLAEAQWRPEESEDYETIISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGR 823
Query: 108 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTL 166
P V +N T + W P ++GY+++ D+ A I+ G +
Sbjct: 824 PTMMVSTTAMN--TALLQWH--PPKELPGELLGYRLQYHRADE----AKPNILDFGKDDQ 875
Query: 167 DADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 200
+ L G Y R+ A + G G IT
Sbjct: 876 HFTVTGLHKGATYIFRLAAKNRAGPGEEFEKEIT 909
Score = 126 (49.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 45/188 (23%), Positives = 85/188 (45%)
Query: 15 NSTAINVT---WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
++TA+N W+P + + G L+G+R++Y + D + + + + +++ + GL
Sbjct: 829 STTAMNTALLQWHP----PKELPGELLGYRLQYHRADEAKPNILDF-GKDDQHFT-VTGL 882
Query: 72 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 131
Y ++ A N AG G E E+ + T AP P + + G+ +T +TW
Sbjct: 883 HKGATYIFRLAAKNRAGPGEEFEKEIT-TPEDAPSGFPQNLRVIGLTTSTTELTWDPPVL 941
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ I Y V +++ N T +T + L P Y ++V A ++ G
Sbjct: 942 AERNGRITNYSVVYRDINSQQELQNVT----ADT-HLMLSGLKPDTTYDIKVRARTSKGA 996
Query: 192 GRMSSPAI 199
G +S P+I
Sbjct: 997 GPLS-PSI 1003
>UNIPROTKB|F1NUS6 [details] [associations]
symbol:CHL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0002020
"protease binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0045177
"apical part of cell" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0007610 GO:GO:0030425 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045177 InterPro:IPR013098 Pfam:PF07679 OMA:WEAGDDH
InterPro:IPR026966 Pfam:PF13882 GeneTree:ENSGT00690000101868
EMBL:AADN02014453 IPI:IPI00595175 ProteinModelPortal:F1NUS6
Ensembl:ENSGALT00000012841 Uniprot:F1NUS6
Length = 1211
Score = 207 (77.9 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 59/217 (27%), Positives = 107/217 (49%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--------EDNPEE 52
+P AP GV NST + V W I R+ +RG L G+++ +WK +PE+
Sbjct: 810 IPDAAPSGVSVDIVNSTLVKVFWFGIP--RDRVRGHLRGYKVSWWKTKSMLDGKRHHPEK 867
Query: 53 TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV 112
+ ++ RN+ +I GL+P +++ + V+AYN+ G+GPES + T P++P +
Sbjct: 868 HFLTFVG--DRNYGMIPGLEPFSEFRLAVLAYNSKGDGPESAPVVFETPEGVPEQP-HFL 924
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADI 170
I + +V ++W P I GY ++ +++ ++ D + TL+ +
Sbjct: 925 KILNFDKDSVTLSWGL--PKRANGHITGYVLQYQIINETHEIGPLMDISVANHTTLNWRL 982
Query: 171 VDLSPGKRYHMRVLAFSNGGDGR-MSSPAITFQMGEE 206
DLSP +Y V A + G G+ ++ +T G +
Sbjct: 983 TDLSPSTKYKFYVKACTAKGCGKPVTEEGLTVAQGSK 1019
Score = 152 (58.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 52/210 (24%), Positives = 87/210 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ + + + W P++ + N G + +++ W++ E + T
Sbjct: 713 PDKNPENIRVEASEPNEMVMKWEPLKPMERNGPG--LEYKVS-WRQQGVETE---WNEET 766
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +L + P Y +KV A NN G GPE + P PS V + +N T
Sbjct: 767 VKKHSLTLRNTPTFVPYEIKVQAINNLGAGPEPNITTGYSGEDIPDAAPSGVSVDIVNST 826
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDT---IIPVGNTLDADIVDLSP 175
V V W + + GYKV W+ D R + + VG+ I L P
Sbjct: 827 LVKVFWFGIPRDRVRGHLRGYKVSWWKTKSMLDGKRHHPEKHFLTFVGDRNYGMIPGLEP 886
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
+ + VLA+++ GDG S+P + F+ E
Sbjct: 887 FSEFRLAVLAYNSKGDGPESAPVV-FETPE 915
>UNIPROTKB|F1PIE8 [details] [associations]
symbol:CNTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007605 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00550000074380 OMA:SPAADNH
EMBL:AAEX03012687 EMBL:AAEX03012688 EMBL:AAEX03012689
EMBL:AAEX03012690 EMBL:AAEX03012691 Ensembl:ENSCAFT00000006465
Uniprot:F1PIE8
Length = 1018
Score = 205 (77.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 59/195 (30%), Positives = 89/195 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + + + I V W I +E++ GR G + YWK+ E+ A +R
Sbjct: 793 PSAAPTDVKATSVSVSEILVAWKHI---KESL-GRPQGFEVGYWKDMEQEDAAETVKTRA 848
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ ++ GL+ +T Y+ V AYN AG GP S T + P + PS + + +
Sbjct: 849 NESSVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVRATTKKSPPSQAPSNLRWEQ-QGSQ 907
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
+ + W V P E ++GYKV + S+ +T P IV L Y +
Sbjct: 908 LSLGWEPVRPLTNESDVMGYKVFYRQEGHSNSQVIETQKPQA------IVPLPDAGVYVI 961
Query: 182 RVLAFSNGGDGRMSS 196
V A+S GGDG SS
Sbjct: 962 EVRAYSEGGDGTASS 976
Score = 149 (57.5 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 49/202 (24%), Positives = 84/202 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG--RLIGHR---IKYWKEDNPEET-A 54
+P+ AP V R + + W P+ +N G ++ R + WKE + A
Sbjct: 690 VPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSEA 749
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ R + P T + VKV YNN G+GP S+ + + P P+ V
Sbjct: 750 SKFIYRDE-------SVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKA 802
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
++ + + V W+++ S G++V W+ D + A +T+ N + L
Sbjct: 803 TSVSVSEILVAWKHIKESLGRPQ--GFEVGYWK-DMEQEDAAETVKTRANESSVILTGLE 859
Query: 175 PGKRYHMRVLAFSNGGDGRMSS 196
YH V A++ G G SS
Sbjct: 860 GNTLYHFTVRAYNGAGYGPPSS 881
>UNIPROTKB|E2R6Z2 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00590000082937 EMBL:AAEX03012523
EMBL:AAEX03012524 EMBL:AAEX03012525 EMBL:AAEX03012526
EMBL:AAEX03012527 EMBL:AAEX03012528 EMBL:AAEX03012529
EMBL:AAEX03012530 EMBL:AAEX03012531 EMBL:AAEX03012532
EMBL:AAEX03012533 EMBL:AAEX03012534 EMBL:AAEX03012535
Ensembl:ENSCAFT00000029953 OMA:SEDHYLA Uniprot:E2R6Z2
Length = 1921
Score = 207 (77.9 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 61/216 (28%), Positives = 95/216 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P N G L+ + ++Y D+P+ V +
Sbjct: 623 PSAPPQDVKCVSTRSTAILVSWRPPPPDTHN--GALVSYSVRYRPLGSDDPQPKEVNGIP 680
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L T+Y + +A+ G GPES + RT P PP V + +N
Sbjct: 681 PTTTQ-ILLEALDKWTEYRITTVAHTEVGPGPESSPVVIRTDEDVPSAPPRKVEAEALNA 739
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVD----QDMSRANDTIIP-----VGNTLDADI 170
T + V WR +P + I GY+V ++ + R D ++ +T + ++
Sbjct: 740 TAIRVLWRSPAPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDIMLADAQWETDDTAEYEM 799
Query: 171 V--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
V +L P Y + V A++ GDG S P + G
Sbjct: 800 VITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 835
Score = 166 (63.5 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 53/190 (27%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 348 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 399
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W P
Sbjct: 400 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIIQWE--EPVEPN 457
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY++ + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 458 GLIRGYRI-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 516
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 517 DPIQVKTQQG 526
>UNIPROTKB|I3LGE9 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022038 "corpus callosum development" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021766
"hippocampus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021510 "spinal cord development"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0021987 GO:GO:0021766
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0004725 GO:GO:0035335
GO:GO:0021549 GO:GO:0021510 InterPro:IPR013098 Pfam:PF07679
GO:GO:0022038 GeneTree:ENSGT00590000082937 OMA:TTMIVQW
EMBL:FP340368 Ensembl:ENSSSCT00000031816 Uniprot:I3LGE9
Length = 1830
Score = 206 (77.6 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 59/216 (27%), Positives = 96/216 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P E G L+ + ++Y ++P+ V +
Sbjct: 618 PSAPPQDVKCVSTRSTAILVSWRPPP--PETHNGALVSYSVRYRPLGSEDPQPKEVNGIP 675
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L T+Y + +A+ G GPES + RT P PP V + +N
Sbjct: 676 PTTTQ-ILLEALDKWTEYRITAVAHTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNA 734
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVD----QDMSRANDTIIP-----VGNTLDADI 170
T + V WR +P + I GY+V ++ + R D ++ + +T + ++
Sbjct: 735 TAIRVLWRSPAPGRQHGQIRGYQVHYVRMEGAEARGPPRIKDVMLADAQWEMDDTAEYEM 794
Query: 171 V--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
+ +L P Y + V A++ GDG S P + G
Sbjct: 795 IITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 830
Score = 166 (63.5 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 53/190 (27%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 345 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 396
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W P
Sbjct: 397 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIIQWE--EPVEPN 454
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY++ + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 455 GLIRGYRI-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 513
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 514 DPIQVKTQQG 523
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 59/201 (29%), Positives = 92/201 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R ++T + + W E + N G + G+RI Y E PE +
Sbjct: 426 PASAPRNVQARMLSATTMIIQWE--EPVEPN--GLIRGYRIYYTME--PEHPVGNWQKHN 479
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + + +
Sbjct: 480 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-FRAEAKSE 538
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD---ADIVD-LSP 175
T++ ++W SP +E II Y++ E D VG T D A +VD L P
Sbjct: 539 TSIGLSW---SPP-RQESIIKYELLYREGDHGRE--------VGRTFDPATAFVVDDLKP 586
Query: 176 GKRYHMRVLAFSNGGDGRMSS 196
Y R+ A S G G +S
Sbjct: 587 NTEYAFRLAARSPQGLGAFTS 607
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 46/196 (23%), Positives = 82/196 (41%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + + T+I ++W+P +E+I I + + Y + D+ E + T
Sbjct: 528 PMNFRAEAKSETSIGLSWSPPR--QESI----IKYELLYREGDHGREVGRTFDPAT---- 577
Query: 66 ALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
A +V L+P+T+Y ++ A + G G + +RT + P PP V T + V
Sbjct: 578 AFVVDDLKPNTEYAFRLAARSPQGLGAFTSVVRQRTLQSKPSAPPQDVKCVSTRSTAILV 637
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRV 183
+WR P ++ Y VR + + + + IP T + L Y +
Sbjct: 638 SWRPPPPETHNGALVSYSVRYRPLGSEDPQPKEVNGIPP-TTTQILLEALDKWTEYRITA 696
Query: 184 LAFSNGGDGRMSSPAI 199
+A + G G SSP +
Sbjct: 697 VAHTEVGPGPESSPVV 712
>UNIPROTKB|F1NQ49 [details] [associations]
symbol:F1NQ49 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:AADN02066164 EMBL:AADN02066165
EMBL:AADN02066166 EMBL:AADN02066167 EMBL:AADN02066168
EMBL:AADN02066169 EMBL:AADN02066170 EMBL:AADN02066171
EMBL:AADN02066172 EMBL:AADN02066173 EMBL:AADN02066174
EMBL:AADN02066175 EMBL:AADN02066176 EMBL:AADN02066177
EMBL:AADN02066178 EMBL:AADN02066179 EMBL:AADN02066180
EMBL:AADN02066181 EMBL:AADN02066182 EMBL:AADN02066183
EMBL:AADN02066184 EMBL:AADN02066185 EMBL:AADN02066186
EMBL:AADN02066187 EMBL:AADN02066188 EMBL:AADN02066189
EMBL:AADN02066190 EMBL:AADN02066191 EMBL:AADN02066192
EMBL:AADN02066193 EMBL:AADN02066194 EMBL:AADN02066195
EMBL:AADN02066196 EMBL:AADN02066197 EMBL:AADN02066198
EMBL:AADN02066199 EMBL:AADN02066200 EMBL:AADN02066201
EMBL:AADN02066202 EMBL:AADN02066203 IPI:IPI00598122
Ensembl:ENSGALT00000024292 ArrayExpress:F1NQ49 Uniprot:F1NQ49
Length = 1911
Score = 206 (77.6 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 64/219 (29%), Positives = 98/219 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK---ED-NPEETAVYY 57
P PQ + +ST+I V+W P + EN G + + IKY + ED P E +
Sbjct: 603 PSAPPQDISCTSPSSTSILVSWKPPPV--ENQNGIITAYSIKYIEIDGEDVKPHE--ILG 658
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+S + + L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +
Sbjct: 659 ISSDSTQY-LLEQLEKWTEYRISVTAHTDVGPGPESLAVLIRTDEDVPSGPPRKVEVEAV 717
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN----DTIIPVGNTLDAD---- 169
N T V V+WR P+ + I GY+V ++ + D ++ T+ D
Sbjct: 718 NSTAVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDIMLADAQTMRHDERTS 777
Query: 170 ----IVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
I L P Y V A++ GDG S P + G
Sbjct: 778 LEMIISGLQPDTTYSFTVTAYTTKGDGARSKPKLVSTTG 816
Score = 171 (65.3 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 59/184 (32%), Positives = 88/184 (47%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I + K +E E V TTR + GL P +
Sbjct: 330 ATSITLTWDSGN--PEPVSYYMIQLKPKNSEEPYKEIDGV----ATTRY--SVAGLSPYS 381
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y +V+A NN G GP SE RT +AP P V + ++ TT+ V W P
Sbjct: 382 EYEFRVVAVNNIGRGPPSEPVSTRTSEQAPSSAPRNVQARMLSSTTILVQWE--EPEEPN 439
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV---DLSPGKRYHMRVLAFSNGGDG 192
I GY+V + +D N + N D+ I +L P K Y ++VLAF++ GDG
Sbjct: 440 GQIQGYRV-YYTMDPTQ-HVNSWL--KHNVADSHITTIGNLVPQKTYSVKVLAFTSVGDG 495
Query: 193 RMSS 196
+SS
Sbjct: 496 PLSS 499
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/229 (26%), Positives = 94/229 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL- 58
+P P+ V NSTA+ V+W +P+ G++ G+++ Y + +N E L
Sbjct: 704 VPSGPPRKVEVEAVNSTAVKVSWRSPVP---NKQHGQIRGYQVHYVRMENGEPKGQPMLK 760
Query: 59 ------SRTTRN------WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 106
++T R+ +I GLQPDT Y V AY G+G S+ L T P
Sbjct: 761 DIMLADAQTMRHDERTSLEMIISGLQPDTTYSFTVTAYTTKGDGARSKPKLVSTTGAVPG 820
Query: 107 KPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL 166
KP + +N T + W +F P+ GY+++ D D T +
Sbjct: 821 KPRLVISHTQMN--TALIQWHPPVDTFG--PLQGYRLKFGRKDVDAF----TTMEFSEKE 872
Query: 167 DA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
D D+ G Y R+ A + G G I ++ +E SG P
Sbjct: 873 DHFTATDIHKGASYVFRLSARNKVGFGE----EIVKEISVPEEVPSGFP 917
>UNIPROTKB|F1NQ48 [details] [associations]
symbol:F1NQ48 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 OMA:RSANIVM EMBL:AADN02066164
EMBL:AADN02066165 EMBL:AADN02066166 EMBL:AADN02066167
EMBL:AADN02066168 EMBL:AADN02066169 EMBL:AADN02066170
EMBL:AADN02066171 EMBL:AADN02066172 EMBL:AADN02066173
EMBL:AADN02066174 EMBL:AADN02066175 EMBL:AADN02066176
EMBL:AADN02066177 EMBL:AADN02066178 EMBL:AADN02066179
EMBL:AADN02066180 EMBL:AADN02066181 EMBL:AADN02066182
EMBL:AADN02066183 EMBL:AADN02066184 EMBL:AADN02066185
EMBL:AADN02066186 EMBL:AADN02066187 EMBL:AADN02066188
EMBL:AADN02066189 EMBL:AADN02066190 EMBL:AADN02066191
EMBL:AADN02066192 EMBL:AADN02066193 EMBL:AADN02066194
EMBL:AADN02066195 EMBL:AADN02066196 EMBL:AADN02066197
EMBL:AADN02066198 EMBL:AADN02066199 EMBL:AADN02066200
EMBL:AADN02066201 EMBL:AADN02066202 EMBL:AADN02066203
IPI:IPI00588154 Ensembl:ENSGALT00000024294 ArrayExpress:F1NQ48
Uniprot:F1NQ48
Length = 1918
Score = 206 (77.6 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 64/219 (29%), Positives = 98/219 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK---ED-NPEETAVYY 57
P PQ + +ST+I V+W P + EN G + + IKY + ED P E +
Sbjct: 610 PSAPPQDISCTSPSSTSILVSWKPPPV--ENQNGIITAYSIKYIEIDGEDVKPHE--ILG 665
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+S + + L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +
Sbjct: 666 ISSDSTQY-LLEQLEKWTEYRISVTAHTDVGPGPESLAVLIRTDEDVPSGPPRKVEVEAV 724
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN----DTIIPVGNTLDAD---- 169
N T V V+WR P+ + I GY+V ++ + D ++ T+ D
Sbjct: 725 NSTAVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDIMLADAQTMRHDERTS 784
Query: 170 ----IVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
I L P Y V A++ GDG S P + G
Sbjct: 785 LEMIISGLQPDTTYSFTVTAYTTKGDGARSKPKLVSTTG 823
Score = 171 (65.3 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 59/184 (32%), Positives = 88/184 (47%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I + K +E E V TTR + GL P +
Sbjct: 337 ATSITLTWDSGN--PEPVSYYMIQLKPKNSEEPYKEIDGV----ATTRY--SVAGLSPYS 388
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y +V+A NN G GP SE RT +AP P V + ++ TT+ V W P
Sbjct: 389 EYEFRVVAVNNIGRGPPSEPVSTRTSEQAPSSAPRNVQARMLSSTTILVQWE--EPEEPN 446
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV---DLSPGKRYHMRVLAFSNGGDG 192
I GY+V + +D N + N D+ I +L P K Y ++VLAF++ GDG
Sbjct: 447 GQIQGYRV-YYTMDPTQ-HVNSWL--KHNVADSHITTIGNLVPQKTYSVKVLAFTSVGDG 502
Query: 193 RMSS 196
+SS
Sbjct: 503 PLSS 506
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/229 (26%), Positives = 94/229 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL- 58
+P P+ V NSTA+ V+W +P+ G++ G+++ Y + +N E L
Sbjct: 711 VPSGPPRKVEVEAVNSTAVKVSWRSPVP---NKQHGQIRGYQVHYVRMENGEPKGQPMLK 767
Query: 59 ------SRTTRN------WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 106
++T R+ +I GLQPDT Y V AY G+G S+ L T P
Sbjct: 768 DIMLADAQTMRHDERTSLEMIISGLQPDTTYSFTVTAYTTKGDGARSKPKLVSTTGAVPG 827
Query: 107 KPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL 166
KP + +N T + W +F P+ GY+++ D D T +
Sbjct: 828 KPRLVISHTQMN--TALIQWHPPVDTFG--PLQGYRLKFGRKDVDAF----TTMEFSEKE 879
Query: 167 DA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
D D+ G Y R+ A + G G I ++ +E SG P
Sbjct: 880 DHFTATDIHKGASYVFRLSARNKVGFGE----EIVKEISVPEEVPSGFP 924
>UNIPROTKB|F1STI0 [details] [associations]
symbol:CNTN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007605 "sensory perception of sound" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007605 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00550000074380 OMA:SPAADNH EMBL:CU463821
EMBL:CU571275 EMBL:CU595411 EMBL:CU856300
Ensembl:ENSSSCT00000016337 Uniprot:F1STI0
Length = 1103
Score = 199 (75.1 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + + + I V W I +E++ GR G I YWK+ E+ A +R
Sbjct: 878 PSAAPTDVKATSVSVSEILVAWKHI---KESL-GRPQGFEIGYWKDMEQEDAAETVKTRG 933
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ ++ GL+ +T Y+ V AYN AG GP S T + P + P+ + + +
Sbjct: 934 NESSIILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAPNNLRWEQ-QGSQ 992
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
+ + W V P E ++GYKV + S+ +T P +V L Y +
Sbjct: 993 LSLGWEPVRPLANESEVMGYKVFYRQEGHSNSQVIETQKPQA------VVPLPDAGVYII 1046
Query: 182 RVLAFSNGGDGRMSS 196
V A+S GGDG SS
Sbjct: 1047 EVRAYSEGGDGTASS 1061
Score = 153 (58.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/202 (24%), Positives = 85/202 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG--RLIGHR---IKYWKEDNPEET-A 54
+P+ AP V R + + W P+ +N G ++ R + WKE + A
Sbjct: 775 VPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSEA 834
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ R + P T + VKV YNN G+GP S+ + + P P+ V
Sbjct: 835 SKFIYRDE-------SVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKA 887
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
++ + + V W+++ S G+++ W+ D + A +T+ GN + L
Sbjct: 888 TSVSVSEILVAWKHIKESLGRPQ--GFEIGYWK-DMEQEDAAETVKTRGNESSIILTGLE 944
Query: 175 PGKRYHMRVLAFSNGGDGRMSS 196
YH V A++ G G SS
Sbjct: 945 GNTLYHFTVRAYNGAGYGPPSS 966
>UNIPROTKB|F1NYN7 [details] [associations]
symbol:CNTN5 "Contactin-5" species:9031 "Gallus gallus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00550000074380 IPI:IPI00595148 OMA:SPAADNH
EMBL:AADN02004957 EMBL:AADN02004950 EMBL:AADN02004951
EMBL:AADN02004952 EMBL:AADN02004953 EMBL:AADN02004954
EMBL:AADN02004955 EMBL:AADN02004956 ProteinModelPortal:F1NYN7
Ensembl:ENSGALT00000027797 Uniprot:F1NYN7
Length = 987
Score = 198 (74.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 65/199 (32%), Positives = 95/199 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + + + I V W I +E++ GR G I YWK+ EE A +
Sbjct: 762 PTAAPIDVKATSLSVSEILVAWKHI---KESL-GRPQGFEIGYWKDMEQEEAAEKVKTAG 817
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH-IKGINPT 120
+ L+ GL+ +T Y++ V AYN AG GP S T + P + PS V I+ + +
Sbjct: 818 NESSLLLTGLEGNTLYHLTVRAYNAAGYGPPSTAVRVATKKSPPSQAPSNVMWIQ--DGS 875
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
V + W V P E ++GYKV + + Q +N +I T + +V L Y
Sbjct: 876 HVSLGWEPVRPLANESEVMGYKVLLRQEGQ----SNSQVIETQKT--SAVVILPDVGVYI 929
Query: 181 MRVLAFSNGGDGRMSSPAI 199
+ V A S GGDG +SP I
Sbjct: 930 IEVCAVSEGGDGT-ASPQI 947
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/221 (22%), Positives = 90/221 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG--RLIGHR---IKYWKEDNPEET-A 54
+P+ P V R + + W P+ +N G ++ R + WKE + A
Sbjct: 659 VPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDA 718
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ R + P T + VKV YNN G+GP S + + P P V
Sbjct: 719 SKFIYRDE-------SVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKA 771
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
++ + + V W+++ S G+++ W+ D + A + + GN + L
Sbjct: 772 TSLSVSEILVAWKHIKESLGRPQ--GFEIGYWK-DMEQEEAAEKVKTAGNESSLLLTGLE 828
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
YH+ V A++ G G P+ ++ +K S +P+
Sbjct: 829 GNTLYHLTVRAYNAAGYG---PPSTAVRVATKKSPPSQAPS 866
>UNIPROTKB|Q90W79 [details] [associations]
symbol:CNTN5 "Contactin-5" species:9031 "Gallus gallus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047 eggNOG:NOG293951
HOGENOM:HOG000059617 EMBL:AJ309935 IPI:IPI00595148
RefSeq:NP_989943.1 UniGene:Gga.945 ProteinModelPortal:Q90W79
SMR:Q90W79 PRIDE:Q90W79 GeneID:395317 KEGG:gga:395317 CTD:53942
KO:K06763 OrthoDB:EOG4JWVCR NextBio:20815402 Uniprot:Q90W79
Length = 1027
Score = 198 (74.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 65/199 (32%), Positives = 95/199 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + + + I V W I +E++ GR G I YWK+ EE A +
Sbjct: 802 PTAAPIDVKATSLSVSEILVAWKHI---KESL-GRPQGFEIGYWKDMEQEEAAEKVKTAG 857
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH-IKGINPT 120
+ L+ GL+ +T Y++ V AYN AG GP S T + P + PS V I+ + +
Sbjct: 858 NESSLLLTGLEGNTLYHLTVRAYNAAGYGPPSTAVRVATKKSPPSQAPSNVMWIQ--DGS 915
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
V + W V P E ++GYKV + + Q +N +I T + +V L Y
Sbjct: 916 HVSLGWEPVRPLANESEVMGYKVLLRQEGQ----SNSQVIETQKT--SAVVILPDVGVYI 969
Query: 181 MRVLAFSNGGDGRMSSPAI 199
+ V A S GGDG +SP I
Sbjct: 970 IEVCAVSEGGDGT-ASPQI 987
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/221 (22%), Positives = 90/221 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG--RLIGHR---IKYWKEDNPEET-A 54
+P+ P V R + + W P+ +N G ++ R + WKE + A
Sbjct: 699 VPKTPPANVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDA 758
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ R + P T + VKV YNN G+GP S + + P P V
Sbjct: 759 SKFIYRDE-------SVPPLTPFEVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKA 811
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
++ + + V W+++ S G+++ W+ D + A + + GN + L
Sbjct: 812 TSLSVSEILVAWKHIKESLGRPQ--GFEIGYWK-DMEQEEAAEKVKTAGNESSLLLTGLE 868
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
YH+ V A++ G G P+ ++ +K S +P+
Sbjct: 869 GNTLYHLTVRAYNAAGYG---PPSTAVRVATKKSPPSQAPS 906
>MGI|MGI:97812 [details] [associations]
symbol:Ptprd "protein tyrosine phosphatase, receptor type, D"
species:10090 "Mus musculus" [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=ISO] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0007157
"heterophilic cell-cell adhesion" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016311 "dephosphorylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016791
"phosphatase activity" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IDA] [GO:0035335 "peptidyl-tyrosine
dephosphorylation" evidence=ISO] [GO:0050775 "positive regulation
of dendrite morphogenesis" evidence=IDA] [GO:0050839 "cell adhesion
molecule binding" evidence=IPI] [GO:0097105 "presynaptic membrane
assembly" evidence=IDA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 MGI:MGI:97812 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030182 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0050775 GO:GO:0004725
GO:GO:0035335 GO:GO:0007157 InterPro:IPR013098 Pfam:PF07679
eggNOG:COG5599 GO:GO:0097105 HOGENOM:HOG000010250
GeneTree:ENSGT00590000082937 HOVERGEN:HBG053758 CTD:5789 KO:K06777
OMA:GYYIVIV ChiTaRS:PTPRD EMBL:D13903 EMBL:D13905 EMBL:D13904
EMBL:AF326559 EMBL:AF326560 EMBL:AL844848 EMBL:AL845517
EMBL:AL929181 EMBL:Z23051 IPI:IPI00462846 IPI:IPI00462847
IPI:IPI00551337 IPI:IPI00556869 PIR:C54689 PIR:D54689
RefSeq:NP_001014310.1 RefSeq:NP_035341.2 UniGene:Mm.184021
UniGene:Mm.403663 UniGene:Mm.489057 ProteinModelPortal:Q64487
SMR:Q64487 IntAct:Q64487 STRING:Q64487 PhosphoSite:Q64487
PaxDb:Q64487 PRIDE:Q64487 Ensembl:ENSMUST00000107289 GeneID:19266
KEGG:mmu:19266 NextBio:296140 Bgee:Q64487 CleanEx:MM_PTPRD
Genevestigator:Q64487 GermOnline:ENSMUSG00000028399 Uniprot:Q64487
Length = 1912
Score = 201 (75.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 61/217 (28%), Positives = 99/217 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--- 58
P PQ + +ST+I V+W P + ++N G + + +KY D + L
Sbjct: 609 PSAPPQDISCTSPSSTSILVSWQPPPVEKQN--GIITEYSLKYAAVDGEDFKPHEILGIP 666
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
S TT+ L+ L+ T+Y + V A+ + G GPES L RT P PP V ++ +N
Sbjct: 667 SDTTKY--LLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVN 724
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---------GNTLDAD 169
T V V+WR P+ + I GY+V +++ + + V +T + D
Sbjct: 725 ATAVKVSWRSPVPNKQHGQIRGYQVHYVKMENGEPKGQPMLKDVMLADAQWEFDDTTEHD 784
Query: 170 IV--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
++ L P Y + V A++ GDG S P + G
Sbjct: 785 MIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTG 821
Score = 186 (70.5 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E + TTR + GL P +
Sbjct: 336 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEEPYKEIDGI----ATTRY--SVAGLSPYS 387
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 388 DYEFRVVAVNNIGRGPASEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 445
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 446 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 504
Query: 196 S 196
S
Sbjct: 505 S 505
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 44/164 (26%), Positives = 74/164 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEET------ 53
+P P+ V N+TA+ V+W +P+ G++ G+++ Y K +N E
Sbjct: 710 VPSGPPRKVEVEAVNATAVKVSWRSPVP---NKQHGQIRGYQVHYVKMENGEPKGQPMLK 766
Query: 54 ------AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 107
A + TT + +I GLQP+T Y + V AY G+G S+ L T P K
Sbjct: 767 DVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGK 826
Query: 108 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
P ++ +N T + W +F P+ GY+++ D +
Sbjct: 827 PRLVINHTQMN--TALIQWHPPVDTFG--PLQGYRLKFGRKDME 866
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 49/192 (25%), Positives = 82/192 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + S G ST++ ++W P L N G + + + Y ++ N + +L
Sbjct: 917 IPTGFPQNLHSEGTTSTSVQLSWQPPVLAERN--GVITKYTLLY-RDINVPLLPMEHLIV 973
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ GL+ DT Y VKV A+ + G GP S RT Q H+K + T
Sbjct: 974 PADTSMTLTGLKSDTTYDVKVRAHTSKGPGPYSPSVQFRTL-PVDQVFAKNFHVKAVMKT 1032
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + ++ + +K+ +++ D M D G IV+L P K Y
Sbjct: 1033 SVLLSWE-IPENYNSA--MPFKI-LYD-DGKMVEEVD-----GRATQKLIVNLKPEKSYS 1082
Query: 181 MRVLAFSNGGDG 192
+ N G
Sbjct: 1083 FVLTNRGNSAGG 1094
>UNIPROTKB|F6Y0K4 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
Ensembl:ENSCAFT00000029953 ProteinModelPortal:F6Y0K4 Uniprot:F6Y0K4
Length = 1939
Score = 201 (75.8 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 63/219 (28%), Positives = 95/219 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P PQ V STAI V+W P N G L+ + ++Y D+P+ V +
Sbjct: 630 PSAPPQDVKCVSTRSTAILVSWRPPPPDTHN--GALVSYSVRYRPLGSDDPQPKEVNGIP 687
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L+ L T+Y + +A+ G GPES + RT P PP V + +N
Sbjct: 688 PTTTQ-ILLEALDKWTEYRITTVAHTEVGPGPESSPVVIRTDEDVPSAPPRKVEAEALNA 746
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG------------NTLD 167
T + V WR +P + I GY+V + SRA + P+ +T +
Sbjct: 747 TAIRVLWRSPAPGRQHGQIRGYQVHYVRMLLCPSRATCSPPPLSPAASSHAQWETDDTAE 806
Query: 168 ADIV--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
++V +L P Y + V A++ GDG S P + G
Sbjct: 807 YEMVITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKG 845
Score = 166 (63.5 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 53/190 (27%), Positives = 94/190 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 348 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 399
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W P
Sbjct: 400 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQARMLSATTMIIQWE--EPVEPN 457
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY++ + ++ + N V ++L + L + Y +RVLAF++ GDG +S
Sbjct: 458 GLIRGYRI-YYTMEPEHPVGNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLS 516
Query: 196 SPA-ITFQMG 204
P + Q G
Sbjct: 517 DPIQVKTQQG 526
>UNIPROTKB|P14781 [details] [associations]
symbol:CNTN1 "Contactin-1" species:9031 "Gallus gallus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
Reactome:REACT_115433 InterPro:IPR013098 Pfam:PF07679
HOVERGEN:HBG051047 CTD:1272 eggNOG:NOG293951 HOGENOM:HOG000059617
KO:K06759 EMBL:X14877 EMBL:Y00813 IPI:IPI00822490 PIR:S01998
RefSeq:NP_001004381.3 UniGene:Gga.4796 ProteinModelPortal:P14781
SMR:P14781 IntAct:P14781 STRING:P14781 Ensembl:ENSGALT00000038834
GeneID:417786 KEGG:gga:417786 GeneTree:ENSGT00550000074380
NextBio:20821035 ArrayExpress:P14781 Uniprot:P14781
Length = 1010
Score = 197 (74.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 52/192 (27%), Positives = 90/192 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V G ++ + +TW P+ RE G G+ + + E V +
Sbjct: 697 PNVAPSDVGGGGGSNRELTITWMPLS--REYHYGNNFGYIVAFKPFGEKEWRRVTVTNPE 754
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ + P T+Y VKV A+N+ G+GP S + + + AP + P+ V +K ++ +
Sbjct: 755 IGRYVHKDESMPPSTQYQVKVKAFNSKGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSS 814
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V+W +V+ E+ + GY++R W D A + + +L P RYH
Sbjct: 815 EISVSWHHVT----EKSVEGYQIRYWAA-HDKEAAAQRVQVSNQEYSTKLENLKPNTRYH 869
Query: 181 MRVLAFSNGGDG 192
+ V AF++ G G
Sbjct: 870 IDVSAFNSAGYG 881
Score = 171 (65.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/203 (26%), Positives = 105/203 (51%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V + +S+ I+V+W+ + +++ G ++I+YW + +E A + +
Sbjct: 799 PTEVPTDVSVKVLSSSEISVSWHHVT--EKSVEG----YQIRYWAAHD-KEAAAQRVQVS 851
Query: 62 TRNWAL-IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP--QKPPSAVHIKGIN 118
+ ++ + L+P+T+Y++ V A+N+AG GP S R ++ RKAP Q+P ++ +
Sbjct: 852 NQEYSTKLENLKPNTRYHIDVSAFNSAGYGPPS-RTIDIITRKAPPSQRPRIISSVR--S 908
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDLSPGK 177
+ +TW +V E + GYKV ++ D + + G +T++ + S G+
Sbjct: 909 GSRYIITWDHVKAMSNESAVEGYKV-LYRPD---GQHEGKLFSTGKHTIEVPVP--SDGE 962
Query: 178 RYHMRVLAFSNGGDGRMSSPAIT 200
Y + V A S GGDG ++ I+
Sbjct: 963 -YVVEVRAHSEGGDGEVAQIKIS 984
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 48/207 (23%), Positives = 84/207 (40%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW-----NPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 56
P P G+ TA+ +TW N + + I+ + + WK+ E + +
Sbjct: 594 PPGPPGGIRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTF--LSEEWKDAKTEPSDIE 651
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIK 115
+ R ++ L P +Y +++A N G G P RT P PS V
Sbjct: 652 GNMESAR----VIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGG 707
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLS 174
G + + +TW +S + GY V +++ R T +G + D +
Sbjct: 708 GGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKD-ESMP 766
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITF 201
P +Y ++V AF++ GDG S A+ +
Sbjct: 767 PSTQYQVKVKAFNSKGDGPFSLTAVIY 793
>UNIPROTKB|E1BUX6 [details] [associations]
symbol:CNTN1 "Contactin-1" species:9031 "Gallus gallus"
[GO:0001948 "glycoprotein binding" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0010765
"positive regulation of sodium ion transport" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030246
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0010628 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00550000074380 OMA:DTQYFIE EMBL:AADN02010041
EMBL:AADN02010042 EMBL:AADN02010043 EMBL:AADN02010044 EMBL:AC147968
IPI:IPI00575877 ProteinModelPortal:E1BUX6
Ensembl:ENSGALT00000015506 ArrayExpress:E1BUX6 Uniprot:E1BUX6
Length = 1089
Score = 197 (74.4 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 52/192 (27%), Positives = 90/192 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V G ++ + +TW P+ RE G G+ + + E V +
Sbjct: 697 PNVAPSDVGGGGGSNRELTITWMPLS--REYHYGNNFGYIVAFKPFGEKEWRRVTVTNPE 754
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ + P T+Y VKV A+N+ G+GP S + + + AP + P+ V +K ++ +
Sbjct: 755 IGRYVHKDESMPPSTQYQVKVKAFNSKGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSS 814
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V+W +V+ E+ + GY++R W D A + + +L P RYH
Sbjct: 815 EISVSWHHVT----EKSVEGYQIRYWAA-HDKEAAAQRVQVSNQEYSTKLENLKPNTRYH 869
Query: 181 MRVLAFSNGGDG 192
+ V AF++ G G
Sbjct: 870 IDVSAFNSAGYG 881
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/203 (26%), Positives = 105/203 (51%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V + +S+ I+V+W+ + +++ G ++I+YW + +E A + +
Sbjct: 799 PTEVPTDVSVKVLSSSEISVSWHHVT--EKSVEG----YQIRYWAAHD-KEAAAQRVQVS 851
Query: 62 TRNWAL-IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP--QKPPSAVHIKGIN 118
+ ++ + L+P+T+Y++ V A+N+AG GP S R ++ RKAP Q+P ++ +
Sbjct: 852 NQEYSTKLENLKPNTRYHIDVSAFNSAGYGPPS-RTIDIITRKAPPSQRPRIISSVR--S 908
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDLSPGK 177
+ +TW +V E + GYKV ++ D + + G +T++ + S G+
Sbjct: 909 GSRYIITWDHVKAMSNESAVEGYKV-LYRPD---GQHEGKLFSTGKHTIEVPVP--SDGE 962
Query: 178 RYHMRVLAFSNGGDGRMSSPAIT 200
Y + V A S GGDG ++ I+
Sbjct: 963 -YVVEVRAHSEGGDGEVAQIKIS 984
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 48/207 (23%), Positives = 84/207 (40%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW-----NPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 56
P P G+ TA+ +TW N + + I+ + + WK+ E + +
Sbjct: 594 PPGPPGGIRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTF--LSEEWKDAKTEPSDIE 651
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIK 115
+ R ++ L P +Y +++A N G G P RT P PS V
Sbjct: 652 GNMESAR----VIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGG 707
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLS 174
G + + +TW +S + GY V +++ R T +G + D +
Sbjct: 708 GGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKD-ESMP 766
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITF 201
P +Y ++V AF++ GDG S A+ +
Sbjct: 767 PSTQYQVKVKAFNSKGDGPFSLTAVIY 793
>UNIPROTKB|F1N897 [details] [associations]
symbol:PTPRF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0004725 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 OMA:FTPTIEA EMBL:AADN02012724
EMBL:AADN02012725 EMBL:AADN02012726 EMBL:AADN02012727
EMBL:AADN02012728 EMBL:AADN02012729 IPI:IPI00603030
Ensembl:ENSGALT00000016337 Uniprot:F1N897
Length = 1767
Score = 198 (74.8 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 58/207 (28%), Positives = 90/207 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLS 59
P PQ V +ST I V+W P N G + + I Y + + T V +
Sbjct: 478 PSAPPQEVECVSTSSTTIRVSWVPPPAQSRN--GVITQYSIAYQAVEGDDSTKHVVDGIG 535
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R +W I L+ T+Y V V A+ + G GPES RT P PP V ++ +N
Sbjct: 536 REHSSWE-IKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNS 594
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGK 177
T + V+W+ + + I GY+V +++ + R I + + + I L P
Sbjct: 595 TAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQETVIGGLLPET 654
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S P + G
Sbjct: 655 TYSVTVAAYTTKGDGARSKPKVITTTG 681
Score = 153 (58.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 44/128 (34%), Positives = 64/128 (50%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A NN G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 249 IGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQARMLSASTMLVQWE 308
Query: 128 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV---DLSPGKRYHMRVL 184
P I GY+V + D + + + NT D+ + L G Y +RVL
Sbjct: 309 --QPEEPNGQIRGYRV-YYTTDSHLPLS---MWQKHNTDDSHLTTVGSLITGTTYSIRVL 362
Query: 185 AFSNGGDG 192
AF++ GDG
Sbjct: 363 AFTSVGDG 370
Score = 153 (58.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 54/204 (26%), Positives = 88/204 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPE---ETAVY 56
+P P+ V NSTAI V+W PI G++ G+++ Y K +N E + +
Sbjct: 579 VPSAPPRKVEVESVNSTAIRVSWKLPIS---NKQHGQIRGYQVTYVKLENNEPRGQPVIK 635
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
+ + +I GL P+T Y V V AY G+G S+ + T P KP +
Sbjct: 636 DVMLSEAQETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTA 695
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
+N T + W P ++GY+++ +D++ + N TI + +L G
Sbjct: 696 MN--TALIQWH--PPKEMVGELLGYRLQYRRLDEE--KMN-TIDFGKRDHHYTVTNLHKG 748
Query: 177 KRYHMRVLAFSNGGDGRMSSPAIT 200
Y R+ A + G G IT
Sbjct: 749 ATYLFRLSAKNRAGPGEEFEKEIT 772
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 49/186 (26%), Positives = 84/186 (45%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+ T I +TW P +E R+ + + YW+ ++ + V + T ++A + GL+PD
Sbjct: 397 SDTRILLTWLPAS--QE----RITKYELLYWEGEDGVQQKVEF--DPTSSYA-VEGLKPD 447
Query: 75 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 134
T Y ++ A++ G G + RT + P PP V + TT+ V+W V P +
Sbjct: 448 TLYKFRLGAHSELGVGVYTPTVEARTAQSTPSAPPQEVECVSTSSTTIRVSW--VPPPAQ 505
Query: 135 EEP--IIGYKVRVWEVDQDMSRANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGD 191
I Y + V+ D S + + +G + +I DL Y + V A ++ G
Sbjct: 506 SRNGVITQYSIAYQAVEGDDSTKH-VVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGP 564
Query: 192 GRMSSP 197
G S P
Sbjct: 565 GPESIP 570
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 46/188 (24%), Positives = 87/188 (46%)
Query: 15 NSTAIN---VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
++TA+N + W+P +E + G L+G+R++Y + D + + + R ++ + L
Sbjct: 692 STTAMNTALIQWHPP---KEMV-GELLGYRLQYRRLDEEKMNTIDFGKRD-HHYT-VTNL 745
Query: 72 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 131
Y ++ A N AG G E E+ + T P P + + G+ +T V W
Sbjct: 746 HKGATYLFRLSAKNRAGPGEEFEKEIT-TAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVL 804
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ I+ Y V V +D++ D ++ + + +L P Y ++V A +N G
Sbjct: 805 AERNGKIVNYTV----VYRDINSQQD-LVNITKDTSITLTNLKPDTTYDIKVRARTNKGV 859
Query: 192 GRMSSPAI 199
G +S P+I
Sbjct: 860 GPLS-PSI 866
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 41/151 (27%), Positives = 67/151 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + G ++ V W+P L N G+++ + + Y ++ N ++ V
Sbjct: 777 VPSGFPQNLRVVGLTTSTTEVAWDPPVLAERN--GKIVNYTVVY-RDINSQQDLVNITKD 833
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T+ + L+PDT Y +KV A N G GP S RT Q + + T
Sbjct: 834 TS---ITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTM-PVEQVFAKNFRVNAVMKT 889
Query: 121 TVHVTWRYVSPSFEEE-PI-IGYKVRVWEVD 149
+V ++W V S++ P I Y + EVD
Sbjct: 890 SVLLSWE-VPDSYKSAVPFKILYNSQSVEVD 919
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 47/199 (23%), Positives = 88/199 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V +R +++ + V W E N G++ G+R+ Y+ D+ +++ T
Sbjct: 286 PSSPPLKVQARMLSASTMLVQWEQPE--EPN--GQIRGYRV-YYTTDSHLPLSMWQKHNT 340
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ VG L T Y ++V+A+ + G+GP S+ +T + P +P + + T
Sbjct: 341 DDSHLTTVGSLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPAD-FQAEAESDT 399
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ +TW S +E I Y++ WE + + + + T + L P Y
Sbjct: 400 RILLTWLPAS----QERITKYELLYWEGEDGVQQK----VEFDPTSSYAVEGLKPDTLYK 451
Query: 181 MRVLAFSNGGDGRMSSPAI 199
R+ A S G G + +P +
Sbjct: 452 FRLGAHSELGVG-VYTPTV 469
>ZFIN|ZDB-GENE-030427-1 [details] [associations]
symbol:cntn1a "contactin 1a" species:7955 "Danio
rerio" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-030427-1 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 EMBL:AY138255
IPI:IPI00484693 UniGene:Dr.24963 ProteinModelPortal:Q8AXZ4
SMR:Q8AXZ4 HOVERGEN:HBG051047 Uniprot:Q8AXZ4
Length = 1032
Score = 195 (73.7 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 58/204 (28%), Positives = 98/204 (48%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-NPEETAVYYLS 59
+P AP +R ++T V W P++L + ++++YW+E E +A L
Sbjct: 821 VPAEAPIITEARALSATEAIVIWVPVQL------PTVERYQVRYWRESVENEASAQRVLV 874
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK-GIN 118
+ N + ++PD+ Y V+V A N AG GP S+R T + P +PP + K +
Sbjct: 875 SSRENHTRLDNMKPDSHYLVEVRACNGAGYGPASQRNRIYTKKSPPSRPPKIISTKMHYS 934
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
T++++ W V E + GYKV + + + + T+ T + +DL P +R
Sbjct: 935 GTSINIAWEKVESLNNESTVAGYKV----LYRQHGQPSGTLY----TTEKQSIDL-PMRR 985
Query: 179 --YHMRVLAFSNGGDGRMSSPAIT 200
Y + V A S GGDG ++ IT
Sbjct: 986 GEYLVEVRAHSEGGDGAVAQVRIT 1009
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/196 (22%), Positives = 80/196 (40%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP + G S + +TW P++ + G G+ I + ++PE V
Sbjct: 720 PIVAPSDIGGGGGTSRELTITWTPVQ--SQYYYGSNFGYIIAFKPHNDPEWLRVTVTDPE 777
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ + + P T++ VK+ A+N+ GEGP S + + P + P + ++ T
Sbjct: 778 AQKYVHKDPKIPPSTRFEVKMKAFNSQGEGPFSNSAFIYSAQDVPAEAPIITEARALSAT 837
Query: 121 TVHVTWRYVS-PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
V W V P+ E Y+VR W + + ++ + ++ P Y
Sbjct: 838 EAIVIWVPVQLPTVER-----YQVRYWRESVENEASAQRVLVSSRENHTRLDNMKPDSHY 892
Query: 180 HMRVLAFSNGGDGRMS 195
+ V A + G G S
Sbjct: 893 LVEVRACNGAGYGPAS 908
>UNIPROTKB|F1MVI0 [details] [associations]
symbol:CNTN1 "Contactin-1" species:9913 "Bos taurus"
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0010765 "positive regulation of sodium ion transport"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0001948 "glycoprotein binding" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0010628 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 IPI:IPI00712822 UniGene:Bt.349
GeneTree:ENSGT00550000074380 OMA:DTQYFIE EMBL:DAAA02013116
EMBL:DAAA02013117 EMBL:DAAA02013118 EMBL:DAAA02013119
ProteinModelPortal:F1MVI0 PRIDE:F1MVI0 Ensembl:ENSBTAT00000045515
ArrayExpress:F1MVI0 Uniprot:F1MVI0
Length = 1018
Score = 193 (73.0 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 55/201 (27%), Positives = 92/201 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V G ++ + +TW P+ RE G G+ + + D E V +
Sbjct: 706 PNVAPSDVGGGGGSNRELTITWAPLS--REYHYGNNFGYIVAFKPFDGEEWKKVTVTNPD 763
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T + ++P T + VKV A+NN G+GP S + + + AP + P+AV +K ++ +
Sbjct: 764 TGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSS 823
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V W +V E+ + Y++R W D A + A + +L P +Y
Sbjct: 824 EISVHWEHVV----EKIVESYQIRYW-ASHDKEAAAHRVQVASQEYSARLENLLPDTQYF 878
Query: 181 MRVLAFSNGGDGRMSSPAITF 201
+ V A ++ G G S TF
Sbjct: 879 VEVRACNSAGCGPPSDMIETF 899
Score = 170 (64.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 59/201 (29%), Positives = 100/201 (49%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + +S+ I+V W E + E I + ++I+YW + +E A + +
Sbjct: 808 PSEAPTAVGVKVLSSSEISVHW---EHVVEKI---VESYQIRYWASHD-KEAAAHRVQVA 860
Query: 62 TRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
++ + A + L PDT+Y+V+V A N+AG GP S+ +E +KAP P + I +
Sbjct: 861 SQEYSARLENLLPDTQYFVEVRACNSAGCGPPSDM-IETFTKKAPPSQPPRI-ISSVRSG 918
Query: 121 TVHV-TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ ++ TW +V E + GYKV Q + T ++++ I G+ Y
Sbjct: 919 SRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTH---KHSIEVPIP--RDGE-Y 972
Query: 180 HMRVLAFSNGGDGRMSSPAIT 200
+ V A S+GGDG +S I+
Sbjct: 973 VVEVRAHSDGGDGVVSQVKIS 993
>UNIPROTKB|Q9BMN8 [details] [associations]
symbol:ptp-3 "Tyrosine-protein phosphatase Lar-like"
species:6239 "Caenorhabditis elegans" [GO:0035335
"peptidyl-tyrosine dephosphorylation" evidence=ISS] [GO:0006470
"protein dephosphorylation" evidence=ISS] [GO:0005912 "adherens
junction" evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0010172 "embryonic body morphogenesis"
evidence=IMP] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=ISS] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0016021 GO:GO:0005886
GO:GO:0009792 Gene3D:2.60.40.10 InterPro:IPR013783 PROSITE:PS00290
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0000003 GO:GO:0045202 GO:GO:0008045
GO:GO:0007416 GO:GO:0005912 GO:GO:0008544 InterPro:IPR013098
Pfam:PF07679 GO:GO:0010172 GO:GO:0007369 GO:GO:0035418
eggNOG:COG5599 EMBL:AF316539 EMBL:AF316540 EMBL:Z46811 EMBL:Z49938
PIR:T19121 RefSeq:NP_001021942.1 RefSeq:NP_001021943.1
UniGene:Cel.5177 ProteinModelPortal:Q9BMN8 SMR:Q9BMN8
MINT:MINT-1041938 STRING:Q9BMN8 PaxDb:Q9BMN8 PRIDE:Q9BMN8
GeneID:174685 KEGG:cel:CELE_C09D8.1 UCSC:C09D8.1d CTD:174685
WormBase:C09D8.1a WormBase:C09D8.1b HOGENOM:HOG000010250 KO:K05695
NextBio:885058 ArrayExpress:Q9BMN8 GO:GO:0005001 Uniprot:Q9BMN8
Length = 2200
Score = 193 (73.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 55/202 (27%), Positives = 96/202 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--DNPEETAVYYLS 59
P AP +R N +I V W P E + N G + G+++ Y + P + +
Sbjct: 436 PATAPVSPQARSLNRDSILVKWGPCE--QPN--GLITGYKVYYTNDLVTTPIREWKQHDA 491
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
++ I GL+PD++Y+V+V+A N+ G+ P S T + P +PP +K ++
Sbjct: 492 KSDEFMTTINGLEPDSRYFVRVIAQNSEGDSPLSTLVTVATRQGIPGQPPMLT-VKALDS 550
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKR 178
+ +TW P + P++GY VR D + + + + + +V L P K
Sbjct: 551 RRMQLTWD--KPLYSS-PVVGYTVRYNTSDGEKE------LTLTSPHEKHVVTGLHPDKY 601
Query: 179 YHMRVLAFSNGGDGRMSSPAIT 200
Y+ RV A+S+ G G + P I+
Sbjct: 602 YYFRVAAYSDRGQGEFTEPMIS 623
>WB|WBGene00004215 [details] [associations]
symbol:ptp-3 species:6239 "Caenorhabditis elegans"
[GO:0006470 "protein dephosphorylation" evidence=IEA;ISS]
[GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA]
[GO:0016311 "dephosphorylation" evidence=IEA] [GO:0016791
"phosphatase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP] [GO:0008544
"epidermis development" evidence=IMP] [GO:0005912 "adherens
junction" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0005001 "transmembrane receptor protein tyrosine phosphatase
activity" evidence=ISS] [GO:0010172 "embryonic body morphogenesis"
evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007416 "synapse assembly" evidence=IMP]
[GO:0035418 "protein localization to synapse" evidence=IMP]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 SMART:SM00194
GO:GO:0009792 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0000003 GO:GO:0045202 GO:GO:0008045 GO:GO:0007416
GO:GO:0005912 GO:GO:0008544 InterPro:IPR013098 Pfam:PF07679
GO:GO:0010172 GO:GO:0007369 GO:GO:0035418 EMBL:Z46811 EMBL:Z49938
UniGene:Cel.5177 GeneID:174685 KEGG:cel:CELE_C09D8.1 CTD:174685
KO:K05695 NextBio:885058 GO:GO:0005001 GeneTree:ENSGT00590000082937
OMA:GYYIVIV RefSeq:NP_001122582.1 ProteinModelPortal:G5EDC5
SMR:G5EDC5 EnsemblMetazoa:C09D8.1d WormBase:C09D8.1d Uniprot:G5EDC5
Length = 2227
Score = 193 (73.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 55/202 (27%), Positives = 96/202 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--DNPEETAVYYLS 59
P AP +R N +I V W P E + N G + G+++ Y + P + +
Sbjct: 483 PATAPVSPQARSLNRDSILVKWGPCE--QPN--GLITGYKVYYTNDLVTTPIREWKQHDA 538
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
++ I GL+PD++Y+V+V+A N+ G+ P S T + P +PP +K ++
Sbjct: 539 KSDEFMTTINGLEPDSRYFVRVIAQNSEGDSPLSTLVTVATRQGIPGQPPMLT-VKALDS 597
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKR 178
+ +TW P + P++GY VR D + + + + + +V L P K
Sbjct: 598 RRMQLTWD--KPLYSS-PVVGYTVRYNTSDGEKE------LTLTSPHEKHVVTGLHPDKY 648
Query: 179 YHMRVLAFSNGGDGRMSSPAIT 200
Y+ RV A+S+ G G + P I+
Sbjct: 649 YYFRVAAYSDRGQGEFTEPMIS 670
>UNIPROTKB|F1SHN1 [details] [associations]
symbol:LOC100521555 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0010976
"positive regulation of neuron projection development"
evidence=IEA] [GO:0010765 "positive regulation of sodium ion
transport" evidence=IEA] [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0001948 "glycoprotein binding"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0010628
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00550000074380 OMA:DTQYFIE EMBL:AEMK01195239
EMBL:CU914199 EMBL:FP089683 Ensembl:ENSSSCT00000000855
ArrayExpress:F1SHN1 Uniprot:F1SHN1
Length = 1019
Score = 187 (70.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V G ++ + +TW P+ RE G G+ + + D E V +
Sbjct: 706 PNVAPSDVGGGGGSNRELTITWAPLS--REYHYGNNFGYIVAFKPFDGEEWKKVTVTNPD 763
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T + ++P T + VKV A+NN G+GP S + + + AP + P+ V +K ++ +
Sbjct: 764 TGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTEVGVKVLSSS 823
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V W +V E+ + Y++R W D A + A + +L P +Y
Sbjct: 824 EISVHWEHVV----EKIVESYQIRYWAA-HDKEAAAHRVQVTSQEYSARLENLLPDTQYF 878
Query: 181 MRVLAFSNGGDGRMSSPAITF 201
+ V A ++ G G S TF
Sbjct: 879 VEVRACNSAGCGPPSDMIETF 899
Score = 172 (65.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 60/201 (29%), Positives = 101/201 (50%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + +S+ I+V W E + E I + ++I+YW + +E A + + T
Sbjct: 808 PSEAPTEVGVKVLSSSEISVHW---EHVVEKI---VESYQIRYWAAHD-KEAAAHRVQVT 860
Query: 62 TRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
++ + A + L PDT+Y+V+V A N+AG GP S+ +E +KAP P + I +
Sbjct: 861 SQEYSARLENLLPDTQYFVEVRACNSAGCGPPSDM-IETFTKKAPPSQPPRI-ISSVRSG 918
Query: 121 TVHV-TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ ++ TW +V E + GYKV Q + T ++++ I G+ Y
Sbjct: 919 SRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTH---KHSIEVPIP--RDGE-Y 972
Query: 180 HMRVLAFSNGGDGRMSSPAIT 200
+ V A S+GGDG +S I+
Sbjct: 973 VVEVRAHSDGGDGVVSQVKIS 993
>ZFIN|ZDB-GENE-030131-5640 [details] [associations]
symbol:cntn5 "contactin 5" species:7955 "Danio
rerio" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-030131-5640
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00550000074380
EMBL:BX927281 EMBL:CABZ01027913 EMBL:CABZ01027914 EMBL:CABZ01027915
EMBL:CABZ01027916 EMBL:CABZ01027917 EMBL:CABZ01027918
EMBL:CABZ01027919 EMBL:CABZ01027920 EMBL:CABZ01027921
EMBL:CABZ01027922 EMBL:CABZ01027923 EMBL:CABZ01027924
EMBL:CABZ01027925 EMBL:CABZ01027926 EMBL:CABZ01052165
EMBL:CABZ01052166 EMBL:CABZ01052167 EMBL:CABZ01052168
EMBL:CABZ01052169 EMBL:CABZ01052170 EMBL:CABZ01052171
EMBL:CABZ01052172 EMBL:CABZ01052173 EMBL:CABZ01052174
EMBL:CABZ01052175 EMBL:CABZ01052176 EMBL:CABZ01052177
EMBL:CABZ01052178 EMBL:CU138520 IPI:IPI00971909
ProteinModelPortal:F1QIL9 Ensembl:ENSDART00000098639
ArrayExpress:F1QIL9 Bgee:F1QIL9 Uniprot:F1QIL9
Length = 1114
Score = 187 (70.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 57/196 (29%), Positives = 91/196 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V + +S+ I V W P + GR G+ + +WK+ EE +
Sbjct: 889 PREPPSEVQAFAVSSSEIKVLWKPPS---PGL-GRPQGYEVSFWKDVEQEELGKKKRTLG 944
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP-SAVHIKGINPT 120
L+ GL +T+Y V V +N+AG+GP S T + AP PP + + I+ N
Sbjct: 945 NETNMLLSGLDGNTQYLVSVKGFNSAGQGPSSTAVKISTKKNAPSLPPGNLMWIQEGN-- 1002
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
V ++W V E +IGYKV + + R + ++ N+ A ++ L G Y
Sbjct: 1003 NVSLSWDPVKARDNESEVIGYKVLL----RQEGRGHSQVMRTPNS--AVVLTLPEGGTYI 1056
Query: 181 MRVLAFSNGGDGRMSS 196
+ V A S GG+G S+
Sbjct: 1057 IEVRAVSEGGEGAASA 1072
Score = 161 (61.7 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 58/211 (27%), Positives = 95/211 (45%)
Query: 1 MPQVAPQGVFSRGFNSTA--INVTWNPIELIRENIRG--RLIGHRI---KYWKED---NP 50
+P VAP V RG N + ++W P+ +N G ++ R+ + WKE +
Sbjct: 786 VPSVAPANV--RGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFRVNGTRGWKEKMVTSA 843
Query: 51 EETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 110
+ T Y T P T + V+V YNN G+GP SE + P++PPS
Sbjct: 844 DSTTYKYRDET---------FPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPS 894
Query: 111 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW-EVDQD-MSRANDTIIPVGNTLDA 168
V ++ + + V W+ SP GY+V W +V+Q+ + + T+ GN +
Sbjct: 895 EVQAFAVSSSEIKVLWKPPSPGLGRPQ--GYEVSFWKDVEQEELGKKKRTL---GNETNM 949
Query: 169 DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 199
+ L +Y + V F++ G G SS A+
Sbjct: 950 LLSGLDGNTQYLVSVKGFNSAGQGP-SSTAV 979
>UNIPROTKB|F1LNF4 [details] [associations]
symbol:Ptprf "Receptor-type tyrosine-protein phosphatase F"
species:10116 "Rattus norvegicus" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 RGD:3453 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335 IPI:IPI00951388
Ensembl:ENSRNOT00000066531 ArrayExpress:F1LNF4 Uniprot:F1LNF4
Length = 1378
Score = 188 (71.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y+ ++ A ++ G G +
Sbjct: 110 RIIKYELVYWAAEDEGQQHKVTF--DPTSSYTL-EDLKPDTLYHFQLAARSDLGVGVFTP 166
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 154
RT + P PP V ++ +N T VHV+W+ P+ + I GY+V ++ R
Sbjct: 167 TVEARTAQSMPSGPPRKVEVEPLNSTAVHVSWKLPVPNKQHGQIRGYQVTYVRLENGEPR 226
Query: 155 ANDTI--IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
I + + + I L+P Y + V A++ GDG S P + G
Sbjct: 227 GQPIIQDVMLAEAQETTISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTG 278
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 51/196 (26%), Positives = 88/196 (44%)
Query: 21 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYV 79
V W P E N G + G+R+ Y+ D+ + ++ T VG L P Y +
Sbjct: 3 VQWEPPE--EPN--GLVRGYRV-YYTPDSRRPLSAWHKHNTDAGLLTTVGSLLPGITYSL 57
Query: 80 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 139
+V+A+ G+GP S +T + P +P K + T + ++W + P +E II
Sbjct: 58 RVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAKAESDTRIQLSW-LLPP---QERII 112
Query: 140 GYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 198
Y++ W + + + T P + TL+ DL P YH ++ A S+ G G + +P
Sbjct: 113 KYELVYWAAEDEGQQHKVTFDPTSSYTLE----DLKPDTLYHFQLAARSDLGVG-VFTPT 167
Query: 199 ITFQMGEEKEFKSGSP 214
+ + + SG P
Sbjct: 168 VEARTAQS--MPSGPP 181
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/204 (25%), Positives = 86/204 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPE---ETAVY 56
MP P+ V NSTA++V+W P+ G++ G+++ Y + +N E + +
Sbjct: 176 MPSGPPRKVEVEPLNSTAVHVSWKLPVP---NKQHGQIRGYQVTYVRLENGEPRGQPIIQ 232
Query: 57 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
+ I GL P+T Y + V AY G+G S+ + T P +P V
Sbjct: 233 DVMLAEAQETTISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPTMMVSTTA 292
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
++ T + W P ++GY+++ D+ +R N TI + + L G
Sbjct: 293 MH--TALLQWH--PPKELPGELLGYRLQYRRADE--ARPN-TIDFGKDDQHFTVTGLHKG 345
Query: 177 KRYHMRVLAFSNGGDGRMSSPAIT 200
Y R+ A + G G IT
Sbjct: 346 ATYIFRLAAKNRAGPGEEFEKEIT 369
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 47/194 (24%), Positives = 88/194 (45%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
TA+ + W+P + + G L+G+R++Y + D + + + +++ + GL
Sbjct: 295 TAL-LQWHP----PKELPGELLGYRLQYRRADEARPNTIDF-GKDDQHFT-VTGLHKGAT 347
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 136
Y ++ A N AG G E E+ + T AP P + + G+ +T + W +
Sbjct: 348 YIFRLAAKNRAGPGEEFEKEIT-TPEDAPSGFPQNLRVTGLTTSTTELAWDPPVLAERNG 406
Query: 137 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 196
I Y V +++ N T G+ + ++ L P Y ++V A ++ G G +S
Sbjct: 407 RITNYTVVYRDINSQHELQNVT----GD-VHLTLLGLKPDTTYDIKVRAHTSKGAGPLS- 460
Query: 197 PAITFQ-MGEEKEF 209
P+I Q M E+ F
Sbjct: 461 PSIQSQTMPMEQVF 474
>ZFIN|ZDB-GENE-041210-236 [details] [associations]
symbol:cntn1b "contactin 1b" species:7955 "Danio
rerio" [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003961
InterPro:IPR005479 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS00867
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
ZFIN:ZDB-GENE-041210-236 GO:GO:0005524 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
HOVERGEN:HBG051047 HOGENOM:HOG000059617
GeneTree:ENSGT00550000074380 EMBL:BX897729 IPI:IPI00501564
UniGene:Dr.84810 Ensembl:ENSDART00000133157 InParanoid:Q5TYT0
Uniprot:Q5TYT0
Length = 1039
Score = 186 (70.5 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 54/194 (27%), Positives = 90/194 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V + S + VTWNP++ + G+ G+ + + + ++ E
Sbjct: 721 PTVAPSDVIGQVGISGELIVTWNPVK--PQFFFGKKFGYVVAFKQHEDYEWKWSTVEDPE 778
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
TR + + PDT+ +KV +NN GEGP S + + R AP + P V+ + + T
Sbjct: 779 TRRYVYKESMTPDTEIQIKVSTFNNKGEGPASLISVVYSPRIAPTEAPLDVYARQVTSTE 838
Query: 122 VHVTWRYVSPSFEEEP--IIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKR 178
V W P ++ P + GY++R W D A +I V T++ + ++ P
Sbjct: 839 ALVWWL---PVYQAPPMWVDGYQIRYWRKYDDNEAAASRVI-VHRTVNQTRLENMRPDSH 894
Query: 179 YHMRVLAFSNGGDG 192
Y + V AF+ G G
Sbjct: 895 YLIEVRAFNGAGLG 908
Score = 149 (57.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 39/143 (27%), Positives = 66/143 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSR 60
P AP V++R ST V W P+ + G++I+YW++ D+ E A +
Sbjct: 822 PTEAPLDVYARQVTSTEALVWWLPVYQAPPMW---VDGYQIRYWRKYDDNEAAASRVIVH 878
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T N + ++PD+ Y ++V A+N AG GP SE T R P +
Sbjct: 879 RTVNQTRLENMRPDSHYLIEVRAFNGAGLGPPSEHCEMFTRRPPPSRRLRVYKYVSFTRK 938
Query: 121 TVHVTWRYVSPSFEEEPIIGYKV 143
+++ W ++ + E + GYK+
Sbjct: 939 WLYLYWDHIYNYWNESYVEGYKI 961
>ZFIN|ZDB-GENE-061204-4 [details] [associations]
symbol:prtga "protogenin homolog a (Gallus gallus)"
species:7955 "Danio rerio" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-061204-4 GO:GO:0016021
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
eggNOG:NOG316920 EMBL:DQ360115 IPI:IPI00619562
RefSeq:NP_001038495.1 UniGene:Dr.78578 ProteinModelPortal:Q2EY14
GeneID:563834 KEGG:dre:563834 CTD:563834 HOVERGEN:HBG101283
InParanoid:Q2EY14 NextBio:20885099 Uniprot:Q2EY14
Length = 1149
Score = 186 (70.5 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 61/203 (30%), Positives = 97/203 (47%)
Query: 1 MPQVAPQ-GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP+ + SR + + I V+W P+ + RGR+ +R+ Y + T + +
Sbjct: 503 VPLRAPELSLTSR--SPSDIQVSWQPLS--HKLSRGRVSAYRLSYRTSSDGTLTQLELSA 558
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA--VHIKGI 117
T L+ GLQPDT Y +++ A G G S RT + + K P A + ++ +
Sbjct: 559 HKTHQ--LLEGLQPDTTYLLRIAAATAVGWGEPSAWSSHRTPKASSTKVPLAPELQLESL 616
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
N TTV + W P+ + G+K+ E Q S A IP + I L P K
Sbjct: 617 NCTTVTLRWHL--PAGSSSGLQGFKLSYHEEGQ--SEAAQAQIPPHHRQHT-IGGLDPRK 671
Query: 178 RYHMRVLAFSNGGDGRMSSPAIT 200
+YH+++LAFS GDG + I+
Sbjct: 672 KYHIKLLAFSFMGDGYQADQTIS 694
>UNIPROTKB|Q28106 [details] [associations]
symbol:CNTN1 "Contactin-1" species:9913 "Bos taurus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031225 "anchored
to membrane" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0031225 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0007219 InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047
EMBL:D32135 IPI:IPI00712822 PIR:JC4211 RefSeq:NP_776705.1
UniGene:Bt.349 ProteinModelPortal:Q28106 SMR:Q28106 STRING:Q28106
PRIDE:Q28106 GeneID:281705 KEGG:bta:281705 CTD:1272
eggNOG:NOG293951 HOGENOM:HOG000059617 InParanoid:Q28106 KO:K06759
OrthoDB:EOG4DZ1TH NextBio:20805627 Uniprot:Q28106
Length = 1018
Score = 185 (70.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V G ++ + +TW P+ RE G+ + + D E V +
Sbjct: 706 PNVAPSDVGGGGGSNRELTITWAPLS--REYHYFNNFGYIVAFKPFDGEEWKKVTVTNPD 763
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T + ++P T + VKV A+NN G+GP S + + + AP + P+AV +K ++ +
Sbjct: 764 TGRYVHKDETMRPSTAFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSS 823
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V W +V E+ + Y++R W D A + A + +L P +Y
Sbjct: 824 EISVHWEHVV----EKIVESYQIRYW-ASHDKEAAAHRVQVASQEYSARLENLLPDTQYF 878
Query: 181 MRVLAFSNGGDGRMSSPAITF 201
+ V A ++ G G S TF
Sbjct: 879 VEVRACNSAGCGPPSDMTETF 899
Score = 167 (63.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 59/201 (29%), Positives = 99/201 (49%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + +S+ I+V W E + E I + ++I+YW + +E A + +
Sbjct: 808 PSEAPTAVGVKVLSSSEISVHW---EHVVEKI---VESYQIRYWASHD-KEAAAHRVQVA 860
Query: 62 TRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
++ + A + L PDT+Y+V+V A N+AG GP S+ E +KAP P + I +
Sbjct: 861 SQEYSARLENLLPDTQYFVEVRACNSAGCGPPSDM-TETFTKKAPPSQPPRI-ISSVRSG 918
Query: 121 TVHV-TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ ++ TW +V E + GYKV Q + T ++++ I G+ Y
Sbjct: 919 SRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTH---KHSIEVPIP--RDGE-Y 972
Query: 180 HMRVLAFSNGGDGRMSSPAIT 200
+ V A S+GGDG +S I+
Sbjct: 973 VVEVRAHSDGGDGVVSQVKIS 993
>UNIPROTKB|Q92823 [details] [associations]
symbol:NRCAM "Neuronal cell adhesion molecule" species:9606
"Homo sapiens" [GO:0008104 "protein localization" evidence=IEA]
[GO:0019227 "neuronal action potential propagation" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0009897 "external side of
plasma membrane" evidence=NAS] [GO:0007413 "axonal fasciculation"
evidence=NAS] [GO:0045162 "clustering of voltage-gated sodium
channels" evidence=IDA] [GO:0007416 "synapse assembly"
evidence=TAS] [GO:0007409 "axonogenesis" evidence=NAS] [GO:0045666
"positive regulation of neuron differentiation" evidence=NAS]
[GO:0005887 "integral to plasma membrane" evidence=NAS] [GO:0030516
"regulation of axon extension" evidence=NAS] [GO:0016337 "cell-cell
adhesion" evidence=NAS] [GO:0030506 "ankyrin binding" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0001764 "neuron migration" evidence=NAS] [GO:0043005 "neuron
projection" evidence=NAS] [GO:0001525 "angiogenesis" evidence=IEP]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0043194 "axon initial segment"
evidence=ISS] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Reactome:REACT_111045
GO:GO:0007411 GO:GO:0001764 GO:GO:0008104 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003006
PROSITE:PS00290 GO:GO:0009897 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0045202
GO:GO:0007417 GO:GO:0001525 GO:GO:0007416 GO:GO:0030516
GO:GO:0016337 GO:GO:0045666 GO:GO:0045162 EMBL:CH471070
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007413 GO:GO:0043194
EMBL:CH236947 GO:GO:0031290 GO:GO:0030506 GO:GO:0019227
HOGENOM:HOG000231380 HOVERGEN:HBG000144 InterPro:IPR026966
Pfam:PF13882 eggNOG:NOG293951 CTD:4897 KO:K06756 EMBL:U55258
EMBL:AF172277 EMBL:AB002341 EMBL:BX538010 EMBL:AC005683
EMBL:AC007567 EMBL:BC115736 EMBL:AJ001054 EMBL:AJ001057
IPI:IPI00333776 IPI:IPI00333777 IPI:IPI00333778 IPI:IPI00415032
IPI:IPI00873446 IPI:IPI00883753 RefSeq:NP_001032209.1
RefSeq:NP_001180511.1 RefSeq:NP_001180512.1 RefSeq:NP_001180513.1
RefSeq:NP_005001.3 UniGene:Hs.21422 PDB:1UEN PDB:1UEY PDBsum:1UEN
PDBsum:1UEY ProteinModelPortal:Q92823 SMR:Q92823 IntAct:Q92823
STRING:Q92823 PhosphoSite:Q92823 DMDM:215274127 PaxDb:Q92823
PRIDE:Q92823 Ensembl:ENST00000351718 Ensembl:ENST00000379024
Ensembl:ENST00000379028 Ensembl:ENST00000425651 GeneID:4897
KEGG:hsa:4897 UCSC:uc003vfc.3 UCSC:uc003vfe.3 UCSC:uc011kmk.2
GeneCards:GC07M107788 HGNC:HGNC:7994 HPA:HPA012606 MIM:601581
neXtProt:NX_Q92823 PharmGKB:PA31773 ChiTaRS:NRCAM
EvolutionaryTrace:Q92823 GenomeRNAi:4897 NextBio:18839
ArrayExpress:Q92823 Bgee:Q92823 CleanEx:HS_NRCAM
Genevestigator:Q92823 GermOnline:ENSG00000091129 Uniprot:Q92823
Length = 1304
Score = 186 (70.5 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 57/209 (27%), Positives = 96/209 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P VAP V NST V W+P+ L ++IRG L G+RI YWK + + ++ +
Sbjct: 844 LPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEK 901
Query: 61 T------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ ++ GL+P + Y + V N GEGP S + T P P S +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSS---L 958
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIVD 172
K +NPT +T + PS + Y ++ ++ ++ D IP T + +
Sbjct: 959 KIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPANKTRWT-LKN 1017
Query: 173 LSPGKRYHMRVLAFSNGGDG-RMSSPAIT 200
L+ RY A ++ G G +++ A+T
Sbjct: 1018 LNFSTRYKFYFYAQTSAGSGSQITEEAVT 1046
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/210 (21%), Positives = 80/210 (38%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V G + +TW P+ N G + +++ + ++D +E ++
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG--LQYKVSWRQKDGDDEWTSVVVANV 803
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ G Y +KV A N+ G PE + + P P V + +N T
Sbjct: 804 SKY--IVSGTPTFVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTL 861
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSP 175
V W V + GY++ W+ Q S+ N I G+ + L P
Sbjct: 862 AEVHWDPVPLKSIRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEP 920
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y + V + G+G +SP F E
Sbjct: 921 FSHYTLNVRVVNGKGEGP-ASPDRVFNTPE 949
>FB|FBgn0000464 [details] [associations]
symbol:Lar "Leukocyte-antigen-related-like" species:7227
"Drosophila melanogaster" [GO:0006470 "protein dephosphorylation"
evidence=NAS;IDA] [GO:0005001 "transmembrane receptor protein
tyrosine phosphatase activity" evidence=ISS] [GO:0004725 "protein
tyrosine phosphatase activity" evidence=NAS;IDA] [GO:0005886
"plasma membrane" evidence=ISS;IDA] [GO:0007411 "axon guidance"
evidence=IMP;TAS] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;NAS;IMP;TAS] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0001700 "embryonic development via the syncytial
blastoderm" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007155
"cell adhesion" evidence=IMP] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0045467 "R7 cell development"
evidence=IMP] [GO:0008594 "photoreceptor cell morphogenesis"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0048841
"regulation of axon extension involved in axon guidance"
evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0051124 "synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0007412 "axon target recognition" evidence=IMP]
[GO:0032093 "SAM domain binding" evidence=IPI] [GO:0005925 "focal
adhesion" evidence=IDA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 GO:GO:0016021 GO:GO:0005886
GO:GO:0005875 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
GO:GO:0001700 GO:GO:0008360 GO:GO:0030424 GO:GO:0045467
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0051124
GO:GO:0008201 GO:GO:0007155 GO:GO:0048477 GO:GO:0005925
GO:GO:0008045 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007412
GO:GO:0031290 GO:GO:0008594 GO:GO:0048676 GO:GO:0048841
eggNOG:COG5599 KO:K05695 GO:GO:0005001 EMBL:M27700 EMBL:U36857
EMBL:U36849 EMBL:U36850 EMBL:U36851 EMBL:U36852 EMBL:U36853
EMBL:U36854 EMBL:U36855 EMBL:U36856 EMBL:AY051985 PIR:A36182
RefSeq:NP_523604.2 UniGene:Dm.24416 PDB:2YD1 PDB:3PXJ PDBsum:2YD1
PDBsum:3PXJ ProteinModelPortal:P16621 SMR:P16621 DIP:DIP-38648N
IntAct:P16621 STRING:P16621 PaxDb:P16621 EnsemblMetazoa:FBtr0081260
GeneID:35259 KEGG:dme:Dmel_CG10443 UCSC:CG10443-RA CTD:104121
FlyBase:FBgn0000464 GeneTree:ENSGT00590000082937 InParanoid:P16621
OrthoDB:EOG444J14 PhylomeDB:P16621 EvolutionaryTrace:P16621
GenomeRNAi:35259 NextBio:792660 Bgee:P16621 GermOnline:CG10443
Uniprot:P16621
Length = 2029
Score = 188 (71.2 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P+ + + +ST I+++W P + R N GR+I +++ + + ++ A +
Sbjct: 609 VPGAPPRNITAIATSSTTISLSWLPPPVERSN--GRIIYYKVFFVEVGREDDEA----TT 662
Query: 61 TTRNWALIV--GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
T N IV L+ T+Y + V+A + G+GP S + RT P P V +N
Sbjct: 663 MTLNMTSIVLDELKRWTEYKIWVLAGTSVGDGPRSHPIILRTQEDVPGDPQD-VKATPLN 721
Query: 119 PTTVHVTWRYVSPSFEEEP---IIGYKVRVWEV-DQDMSRANDTI-IPVGNTLDADIVDL 173
T++HV+W+ P E++ I GY + E+ D+ N+ V +TL+ ++ L
Sbjct: 722 STSIHVSWK---PPLEKDRNGIIRGYHIHAQELRDEGKGFLNEPFKFDVVDTLEFNVTGL 778
Query: 174 SPGKRYHMRVLAFSNGGDGRMSSPAI 199
P +Y ++V A + GDG S+ +
Sbjct: 779 QPDTKYSIQVAALTRKGDGDRSAAIV 804
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 56/212 (26%), Positives = 93/212 (43%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
AP+ V R +S+ + +TW P E G++ G+++ Y N E + + S+ N
Sbjct: 419 APRNVQVRTLSSSTMVITWEP----PETPNGQVTGYKVYYTTNSNQPEAS--WNSQMVDN 472
Query: 65 WAL--IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 122
L + L P Y V+V AY + G GP S + + P +P S I T V
Sbjct: 473 SELTTVSELTPHAIYTVRVQAYTSMGAGPMSTPVQVKAQQGVPSQP-SNFRATDIGETAV 531
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 182
+ W P+ E I+ Y++ W D ++A+ I D L P Y++
Sbjct: 532 TLQW--TKPTHSSENIVHYEL-YWN-DTYANQAHHKRISNSEAYTLD--GLYPDTLYYIW 585
Query: 183 VLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
+ A S G+G ++P I + K++ G+P
Sbjct: 586 LAARSQRGEGA-TTPPIPVRT---KQYVPGAP 613
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 56/200 (28%), Positives = 86/200 (43%)
Query: 5 APQGVFSR--GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 62
A QGV S+ F +T I T ++ + I H YW + + + R +
Sbjct: 510 AQQGVPSQPSNFRATDIGETAVTLQWTKPTHSSENIVHYELYWNDTYANQA---HHKRIS 566
Query: 63 RNWALIV-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ A + GL PDT YY+ + A + GEG + RT + P PP + + TT
Sbjct: 567 NSEAYTLDGLYPDTLYYIWLAARSQRGEGATTPPIPVRTKQYVPGAPPRNITAIATSSTT 626
Query: 122 VHVTWRYVSPSFEEEP--IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ ++W + P E II YKV EV ++ A + N + +L Y
Sbjct: 627 ISLSW--LPPPVERSNGRIIYYKVFFVEVGREDDEATTMTL---NMTSIVLDELKRWTEY 681
Query: 180 HMRVLAFSNGGDGRMSSPAI 199
+ VLA ++ GDG S P I
Sbjct: 682 KIWVLAGTSVGDGPRSHPII 701
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 53/192 (27%), Positives = 86/192 (44%)
Query: 6 PQGVFSRGFNSTAINVTWNP-IELIRENI-RGRLIGHRIKYWKEDNPEETAVYYLSRTTR 63
PQ V + NST+I+V+W P +E R I RG I H + E +
Sbjct: 712 PQDVKATPLNSTSIHVSWKPPLEKDRNGIIRGYHI-HAQELRDEGKGFLNEPFKFDVVDT 770
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP-TTV 122
+ GLQPDTKY ++V A G+G S + +T P +P ++ I P ++
Sbjct: 771 LEFNVTGLQPDTKYSIQVAALTRKGDGDRSAAIVVKTPGGVPVRPTVSLKIMEREPIVSI 830
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHM 181
+ W + ++ E + GY++R W V +D + + + G + D L G Y
Sbjct: 831 ELEWERPAQTYGE--LRGYRLR-WGV-KDQALKEEMLS--GPQMTKKRFDNLERGVEYEF 884
Query: 182 RVLAFSNGGDGR 193
RV ++ G G+
Sbjct: 885 RVAGSNHIGIGQ 896
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/164 (27%), Positives = 76/164 (46%)
Query: 42 IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTY 101
I+Y K N + A +S + ++ L P T+Y V+A NN G GP S T
Sbjct: 355 IQY-KPKNANQ-AFSEISGIITMYYVVRALSPYTEYEFYVIAVNNIGRGPPSAPATCTTG 412
Query: 102 RKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP 161
+ P V ++ ++ +T+ +TW P + GYKV + + + A+
Sbjct: 413 ETKMESAPRNVQVRTLSSSTMVITWE--PPETPNGQVTGYKV-YYTTNSNQPEASWNSQM 469
Query: 162 VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA-ITFQMG 204
V N+ + +L+P Y +RV A+++ G G MS+P + Q G
Sbjct: 470 VDNSELTTVSELTPHAIYTVRVQAYTSMGAGPMSTPVQVKAQQG 513
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 50/206 (24%), Positives = 89/206 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P + R + VTW+P RE+ G + + +++ K+ + + T
Sbjct: 909 PGGPPSNITIRFQTPDVLCVTWDPPT--REHRNGIITRYDVQFHKKI--DHGLGSERNMT 964
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
R A+ L+ +T+Y +V AY G GP S++ + T R + P S + + + T
Sbjct: 965 LRK-AVFTNLEENTEYIFRVRAYTKQGAGPFSDKLIVETERDMGRAPMS-LQAEATSEQT 1022
Query: 122 VHVTWRYVSPSFEEEPIIGYKV-RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ W P ++GYK+ +D+ VG T AD+V+L +Y
Sbjct: 1023 AEIWWE---PVTSRGKLLGYKIFYTMTAVEDLDDWQTKT--VGLTESADLVNLEKFAQYA 1077
Query: 181 MRVLAFSNGGDGRMSSPAITFQMGEE 206
+ + A G GR+S +T ++ E
Sbjct: 1078 VAIAARFKNGLGRLSEK-VTVRIKPE 1102
>UNIPROTKB|F1LM72 [details] [associations]
symbol:Ptprd "Protein Ptprd" species:10116 "Rattus
norvegicus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 PDBsum:2NV5 IPI:IPI00766917
Ensembl:ENSRNOT00000008897 ArrayExpress:F1LM72 Uniprot:F1LM72
Length = 1386
Score = 186 (70.5 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 58/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E + TTR + GL P +
Sbjct: 221 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEEPYKEIDGI----ATTRY--SVAGLSPYS 272
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 273 DYEFRVVAVNNIGRGPASEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 330
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 331 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 389
Query: 196 S 196
S
Sbjct: 390 S 390
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 55/211 (26%), Positives = 90/211 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R +ST I V W E N G++ G+R+ Y+ D + +
Sbjct: 302 PSSAPRDVQARMLSSTTILVQWKEPE--EPN--GQIQGYRV-YYTMDPTQHVNNWMKHNV 356
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +G L P Y VKV+A+ + G+GP S T P +P + + + T
Sbjct: 357 ADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLN-FKAEPESET 415
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ ++W +P + I Y++ V+ D D I G + + L P Y+
Sbjct: 416 SILLSW---TPP-RSDTIASYEL-VYR-DGDQGEEQRITIEPGTSYR--LQGLKPNSLYY 467
Query: 181 MRVLAFSNGGDGRMSSP--AITFQMGEEKEF 209
R+ A S G G ++ A T Q K F
Sbjct: 468 FRLSARSPQGLGASTAEISARTMQSMFAKNF 498
>WB|WBGene00004371 [details] [associations]
symbol:rig-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0007067 "mitosis"
evidence=IMP] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
GO:GO:0009792 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007067
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0040011 GO:GO:0007155 eggNOG:NOG12793
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00690000101868
KO:K16353 EMBL:FO080677 RefSeq:NP_501339.2
ProteinModelPortal:Q9N3X8 SMR:Q9N3X8 PaxDb:Q9N3X8
EnsemblMetazoa:Y42H9B.2 GeneID:177597 KEGG:cel:CELE_Y42H9B.2
UCSC:Y42H9B.2 CTD:177597 WormBase:Y42H9B.2 HOGENOM:HOG000154278
InParanoid:Q9N3X8 OMA:INLTWAQ NextBio:897520 Uniprot:Q9N3X8
Length = 2325
Score = 188 (71.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 58/209 (27%), Positives = 100/209 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLS 59
P Q +F+ ++T+I+V+W P L+ + G+ G+ I Y + ++N +E L
Sbjct: 1156 PDTPSQRLFAEPVSATSISVSWTP--LLATHWNGQPKGYLIVYREIDDENWKEVRTPAL- 1212
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
R++ + + L+P T Y V V + N G ++ RTY P P + +
Sbjct: 1213 RSSEH--TVTDLRPFTSYEVNVFSENGFGRSLPTDSVKARTYESVPSGSPRNIVVTAEGS 1270
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVW-EVDQDMSRANDTI-IPVGNTLDADIVDLSPGK 177
+ W V+ +IGYK+RV E + M+ I IP +TL A + DL P
Sbjct: 1271 KAAIIKWNPVAELSTNGDVIGYKLRVVPERESLMADETKVIDIPGQSTLMAKVSDLRPFT 1330
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEE 206
YH+ + A++ G+G +S I+F+ E+
Sbjct: 1331 SYHVYMSAYTIVGNGPENSTPISFETMED 1359
Score = 163 (62.4 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 49/195 (25%), Positives = 86/195 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP---EETAVYY 57
+P +P+ + S A + WNP+ + N G +IG++++ E +ET V
Sbjct: 1255 VPSGSPRNIVVTAEGSKAAIIKWNPVAELSTN--GDVIGYKLRVVPERESLMADETKVID 1312
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE-RTYRKAPQKPPSAVHIKG 116
+ + A + L+P T Y+V + AY G GPE+ + T P PP +
Sbjct: 1313 IPGQSTLMAKVSDLRPFTSYHVYMSAYTIVGNGPENSTPISFETMEDVPA-PPESFQCSY 1371
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
I+ V + W + P I Y + W+ + S A D + +GN L + L+P
Sbjct: 1372 ISEQEVRMKW--LPPGSPNGKITNYIISYWKSHEPRSMAIDAPL-LGNLLMFAAMSLNPN 1428
Query: 177 KRYHMRVLAFSNGGD 191
+Y + A ++ G+
Sbjct: 1429 TQYTFAIKARNSKGE 1443
Score = 162 (62.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 21 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 80
+TWN +++N G + + I++W +P+ + + +T N+ I GLQP T+Y V
Sbjct: 977 ITWN--SPLKQN--GIVTKYTIRHWAASSPDVKTKHEVDGSTTNFT-IDGLQPSTRYGVD 1031
Query: 81 VMAYNNAGEGPESERYLERTYRKAPQKP--PSAVHIKGINPTTVHVTWRYVSPSFEEEPI 138
VMA G+GP E E P+ P PS + I I+ TTV + + +P F+
Sbjct: 1032 VMASTRKGDGPVEETKFESGV--PPELPGRPSMLSIGDISATTVQL---HFTPGFDGHTA 1086
Query: 139 IGYKVRVWEVDQDMSR----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I R W V+ M+ A+ + + L P +Y +R++A + G G
Sbjct: 1087 I----RQWVVEGKMADSSVFAHVFNVSAPKARSITVTGLRPFTQYQLRLIAENVKGRGAP 1142
Query: 195 SSPAITFQ 202
S P+ +F+
Sbjct: 1143 SEPSRSFE 1150
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 54/206 (26%), Positives = 87/206 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWN-PIELIREN------IRGRLIGHRIKYWKEDNPEETA 54
P AP+ V + + ++ V W P E + +R RL G+ W E N
Sbjct: 753 PSAAPRNVAASARSPHSVMVQWQQPKEELDSGDVLGYVVRYRLAGYSSLTWNEKN----- 807
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
++ RN L+ L +Y ++V AYN G G SE T P + P V +
Sbjct: 808 --LTTKDARN-TLVDELITWREYEIQVAAYNKRGLGVFSESIEVTTSEGRPTQAPKNVRV 864
Query: 115 KGINPTTVHVTWRYVSPSFEEEPII--GYKVRVWEVDQDMSRANDTII--PVGNTLDADI 170
K +N T V + + +P + P + GYKV+ W+ + + +I P L +
Sbjct: 865 KVLNSTAVAI--EFTAPEQQRIPGVNLGYKVQFWKGEPEKGELYKQVILDPDRRQLTTVV 922
Query: 171 VDLSPGKRYHMRVLAFSNGGDGRMSS 196
+L Y++ L F+ GDG S+
Sbjct: 923 NELEKFGHYNLTTLCFTTPGDGPRSN 948
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/163 (26%), Positives = 76/163 (46%)
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE--RYLERTYRKAPQKPPSAV 112
V+ +S + GL+P T+Y ++++A N G G SE R E T + P P +
Sbjct: 1105 VFNVSAPKARSITVTGLRPFTQYQLRLIAENVKGRGAPSEPSRSFE-TLQTNPDTPSQRL 1163
Query: 113 HIKGINPTTVHVTWR-YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV 171
+ ++ T++ V+W ++ + +P GY + E+D + + T P + + +
Sbjct: 1164 FAEPVSATSISVSWTPLLATHWNGQPK-GYLIVYREIDDENWKEVRT--PALRSSEHTVT 1220
Query: 172 DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
DL P Y + V FS G GR S P + + + SGSP
Sbjct: 1221 DLRPFTSYEVNV--FSENGFGR-SLPTDSVKARTYESVPSGSP 1260
>MGI|MGI:105980 [details] [associations]
symbol:Cntn1 "contactin 1" species:10090 "Mus musculus"
[GO:0001948 "glycoprotein binding" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IMP]
[GO:0010765 "positive regulation of sodium ion transport"
evidence=IMP] [GO:0010976 "positive regulation of neuron projection
development" evidence=IGI] [GO:0016020 "membrane" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IMP] [GO:0030246
"carbohydrate binding" evidence=IDA] [GO:0031175 "neuron projection
development" evidence=IGI] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 MGI:MGI:105980
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0010976
GO:GO:0031225 GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0007219 Reactome:REACT_115202 Reactome:REACT_127416
GO:GO:0021549 GO:GO:0010628 GO:GO:0010765 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047 CTD:1272
eggNOG:NOG293951 HOGENOM:HOG000059617 KO:K06759 OrthoDB:EOG4DZ1TH
GeneTree:ENSGT00550000074380 OMA:DTQYFIE EMBL:X14943 EMBL:BC066864
EMBL:AK045710 EMBL:AK076273 IPI:IPI00123058 PIR:S05944
RefSeq:NP_001153119.1 RefSeq:NP_001153120.1 RefSeq:NP_031753.1
UniGene:Mm.470343 UniGene:Mm.4911 ProteinModelPortal:P12960
SMR:P12960 IntAct:P12960 MINT:MINT-1177246 STRING:P12960
PhosphoSite:P12960 PaxDb:P12960 PRIDE:P12960
Ensembl:ENSMUST00000000109 Ensembl:ENSMUST00000068378
Ensembl:ENSMUST00000169825 GeneID:12805 KEGG:mmu:12805
UCSC:uc007xik.2 InParanoid:P12960 NextBio:282242 Bgee:P12960
CleanEx:MM_CNTN1 Genevestigator:P12960
GermOnline:ENSMUSG00000055022 GO:GO:0001948 Uniprot:P12960
Length = 1020
Score = 183 (69.5 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V G + + +TW P+ RE G G+ + + D E V +
Sbjct: 708 PNVAPSDVGGGGGTNRELTITWAPLS--REYHYGNNFGYIVAFKPFDGEEWKKVTVTNPD 765
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T + + P T + VKV A+NN G+GP S + + + AP + P+ V +K ++ +
Sbjct: 766 TGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSS 825
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V W++V E+ + Y++R W D A + A + +L P +Y
Sbjct: 826 EISVHWKHVL----EKIVESYQIRYW-AGHDKEAAAHRVQVTSQEYSARLENLLPDTQYF 880
Query: 181 MRVLAFSNGGDGRMSSPAITF 201
+ V A ++ G G S TF
Sbjct: 881 IEVGACNSAGCGPSSDVIETF 901
Score = 169 (64.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/202 (29%), Positives = 101/202 (50%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPI-ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
P AP V + +S+ I+V W + E I E+ ++I+YW + +E A + +
Sbjct: 810 PSEAPTEVGVKVLSSSEISVHWKHVLEKIVES-------YQIRYWA-GHDKEAAAHRVQV 861
Query: 61 TTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
T++ + A + L PDT+Y+++V A N+AG GP S+ +E RKAP P + I +
Sbjct: 862 TSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSD-VIETFTRKAPPSQPPRI-ISSVRS 919
Query: 120 TTVHV-TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
+ ++ TW +V E + GYK+ Q + T ++++ I G+
Sbjct: 920 GSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH---KHSIEVPIP--RDGE- 973
Query: 179 YHMRVLAFSNGGDGRMSSPAIT 200
Y + V A S+GGDG +S I+
Sbjct: 974 YVVEVRAHSDGGDGVVSQVKIS 995
>RGD|621300 [details] [associations]
symbol:Cntn1 "contactin 1" species:10116 "Rattus norvegicus"
[GO:0001948 "glycoprotein binding" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA;ISO] [GO:0010765
"positive regulation of sodium ion transport" evidence=IEA;ISO]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA;ISO] [GO:0021549 "cerebellum development"
evidence=IEA;ISO] [GO:0030246 "carbohydrate binding"
evidence=IEA;ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0031225 "anchored to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:621300 GO:GO:0005886
Reactome:REACT_111984 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0031225 GO:GO:0030246 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0007219 GO:GO:0010628 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 HOVERGEN:HBG051047 CTD:1272 eggNOG:NOG293951
HOGENOM:HOG000059617 KO:K06759 OrthoDB:EOG4DZ1TH
GeneTree:ENSGT00550000074380 OMA:DTQYFIE EMBL:D38492
IPI:IPI00206054 PIR:A57112 RefSeq:NP_476459.1 UniGene:Rn.21397
ProteinModelPortal:Q63198 SMR:Q63198 DIP:DIP-53082N STRING:Q63198
PhosphoSite:Q63198 PRIDE:Q63198 Ensembl:ENSRNOT00000006219
GeneID:117258 KEGG:rno:117258 InParanoid:Q63198 NextBio:620126
ArrayExpress:Q63198 Genevestigator:Q63198
GermOnline:ENSRNOG00000004438 Uniprot:Q63198
Length = 1021
Score = 183 (69.5 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V G + + +TW P+ RE G G+ + + D E V +
Sbjct: 708 PNVAPSDVGGGGGTNRELTITWAPLS--REYHYGNNFGYIVAFKPFDGEEWKKVTVTNPD 765
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T + + P T + VKV A+NN G+GP S + + + AP + P+ V +K ++ +
Sbjct: 766 TGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSS 825
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V W++V E+ + Y++R W D A + A + +L P +Y
Sbjct: 826 EISVHWKHVL----EKIVESYQIRYW-AGHDKEAAAHRVQVTSQEYSARLENLLPDTQYF 880
Query: 181 MRVLAFSNGGDGRMSSPAITF 201
+ V A ++ G G S TF
Sbjct: 881 IEVGACNSAGCGPSSDVIETF 901
Score = 169 (64.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/202 (29%), Positives = 101/202 (50%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPI-ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
P AP V + +S+ I+V W + E I E+ ++I+YW + +E A + +
Sbjct: 810 PSEAPTEVGVKVLSSSEISVHWKHVLEKIVES-------YQIRYWA-GHDKEAAAHRVQV 861
Query: 61 TTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
T++ + A + L PDT+Y+++V A N+AG GP S+ +E RKAP P + I +
Sbjct: 862 TSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSD-VIETFTRKAPPSQPPRI-ISSVRS 919
Query: 120 TTVHV-TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
+ ++ TW +V E + GYK+ Q + T ++++ I G+
Sbjct: 920 GSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTH---KHSIEVPIP--RDGE- 973
Query: 179 YHMRVLAFSNGGDGRMSSPAIT 200
Y + V A S+GGDG +S I+
Sbjct: 974 YVVEVRAHSDGGDGVVSQVKIS 995
>UNIPROTKB|F5GWT7 [details] [associations]
symbol:PTPRD "Receptor-type tyrosine-protein phosphatase
delta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
EMBL:AL137125 EMBL:AL356584 EMBL:AL445926 EMBL:AL583805
EMBL:AL590397 UniGene:Hs.446083 GeneID:5789 KEGG:hsa:5789 CTD:5789
HGNC:HGNC:9668 KO:K06777 ChiTaRS:PTPRD GenomeRNAi:5789
NextBio:22528 EMBL:AL133479 EMBL:AL135790 EMBL:AL137069
EMBL:AL137851 EMBL:AL157826 EMBL:AL353638 EMBL:AL353733
EMBL:AL354722 EMBL:AL356054 EMBL:AL390723 EMBL:AL391864
EMBL:AL441884 EMBL:AL451130 EMBL:AL513422 EMBL:AL590307
EMBL:AL591133 EMBL:AL591622 EMBL:AL596451 EMBL:AL669908
IPI:IPI00955467 RefSeq:NP_001035802.1 ProteinModelPortal:F5GWT7
SMR:F5GWT7 PRIDE:F5GWT7 Ensembl:ENST00000397611 UCSC:uc022bdj.1
ArrayExpress:F5GWT7 Bgee:F5GWT7 Uniprot:F5GWT7
Length = 1502
Score = 184 (69.8 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 333 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEELYKEIDGV----ATTRY--SVAGLSPYS 384
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 385 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 442
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 443 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 501
Query: 196 S 196
S
Sbjct: 502 S 502
Score = 117 (46.2 bits), Expect = 0.00077, P = 0.00077
Identities = 55/211 (26%), Positives = 92/211 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R +ST I V W E N G++ G+R+ Y+ D + +
Sbjct: 414 PSSAPRDVQARMLSSTTILVQWKEPE--EPN--GQIQGYRV-YYTMDPTQHVNNWMKHNV 468
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +G L P Y VKV+A+ + G+GP S T P +P + + + T
Sbjct: 469 ADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLN-FKAEPESET 527
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ ++W +P + I Y++ V++ + TI P G + + L P Y+
Sbjct: 528 SILLSW---TPP-RSDTIANYEL-VYKDGEHGEEQRITIEP-GTSYR--LQGLKPNSLYY 579
Query: 181 MRVLAFSNGGDGRMSSP--AITFQMGEEKEF 209
R+ A S G G ++ A T Q K F
Sbjct: 580 FRLAARSPQGLGASTAEISARTMQSMFAKNF 610
>UNIPROTKB|F5GWY7 [details] [associations]
symbol:PTPRD "Receptor-type tyrosine-protein phosphatase
delta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
EMBL:AL137125 EMBL:AL356584 EMBL:AL445926 EMBL:AL583805
EMBL:AL590397 IPI:IPI00946346 HGNC:HGNC:9668 ChiTaRS:PTPRD
EMBL:AL133479 EMBL:AL135790 EMBL:AL137069 EMBL:AL137851
EMBL:AL157826 EMBL:AL353638 EMBL:AL353733 EMBL:AL354722
EMBL:AL356054 EMBL:AL390723 EMBL:AL391864 EMBL:AL441884
EMBL:AL451130 EMBL:AL513422 EMBL:AL590307 EMBL:AL591133
EMBL:AL591622 EMBL:AL596451 EMBL:AL669908 ProteinModelPortal:F5GWY7
SMR:F5GWY7 Ensembl:ENST00000537002 ArrayExpress:F5GWY7 Bgee:F5GWY7
Uniprot:F5GWY7
Length = 1502
Score = 184 (69.8 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 333 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEELYKEIDGV----ATTRY--SVAGLSPYS 384
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 385 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 442
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 443 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 501
Query: 196 S 196
S
Sbjct: 502 S 502
Score = 117 (46.2 bits), Expect = 0.00077, P = 0.00077
Identities = 55/211 (26%), Positives = 92/211 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R +ST I V W E N G++ G+R+ Y+ D + +
Sbjct: 414 PSSAPRDVQARMLSSTTILVQWKEPE--EPN--GQIQGYRV-YYTMDPTQHVNNWMKHNV 468
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +G L P Y VKV+A+ + G+GP S T P +P + + + T
Sbjct: 469 ADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLN-FKAEPESET 527
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ ++W +P + I Y++ V++ + TI P G + + L P Y+
Sbjct: 528 SILLSW---TPP-RSDTIANYEL-VYKDGEHGEEQRITIEP-GTSYR--LQGLKPNSLYY 579
Query: 181 MRVLAFSNGGDGRMSSP--AITFQMGEEKEF 209
R+ A S G G ++ A T Q K F
Sbjct: 580 FRLAARSPQGLGASTAEISARTMQSMFAKNF 610
>UNIPROTKB|F5GWR7 [details] [associations]
symbol:PTPRD "Receptor-type tyrosine-protein phosphatase
delta" species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
EMBL:AL137125 EMBL:AL356584 EMBL:AL445926 EMBL:AL583805
EMBL:AL590397 IPI:IPI00872363 HGNC:HGNC:9668 ChiTaRS:PTPRD
EMBL:AL133479 EMBL:AL135790 EMBL:AL137069 EMBL:AL137851
EMBL:AL157826 EMBL:AL353638 EMBL:AL353733 EMBL:AL354722
EMBL:AL356054 EMBL:AL390723 EMBL:AL391864 EMBL:AL441884
EMBL:AL451130 EMBL:AL513422 EMBL:AL590307 EMBL:AL591133
EMBL:AL591622 EMBL:AL596451 EMBL:AL669908 ProteinModelPortal:F5GWR7
SMR:F5GWR7 PRIDE:F5GWR7 Ensembl:ENST00000397617 ArrayExpress:F5GWR7
Bgee:F5GWR7 Uniprot:F5GWR7
Length = 1505
Score = 184 (69.8 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 59/181 (32%), Positives = 89/181 (49%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ E + +I H+ K +E E V TTR + GL P +
Sbjct: 326 ATSITLTWDSGN--PEPVSYYIIQHKPKNSEELYKEIDGV----ATTRY--SVAGLSPYS 377
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
Y +V+A NN G GP SE L +T +AP P V + ++ TT+ V W+ P
Sbjct: 378 DYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPN 435
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
I GY+V + +D N V ++ I +L P K Y ++VLAF++ GDG +S
Sbjct: 436 GQIQGYRV-YYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLS 494
Query: 196 S 196
S
Sbjct: 495 S 495
Score = 117 (46.2 bits), Expect = 0.00077, P = 0.00077
Identities = 55/211 (26%), Positives = 92/211 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V +R +ST I V W E N G++ G+R+ Y+ D + +
Sbjct: 407 PSSAPRDVQARMLSSTTILVQWKEPE--EPN--GQIQGYRV-YYTMDPTQHVNNWMKHNV 461
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +G L P Y VKV+A+ + G+GP S T P +P + + + T
Sbjct: 462 ADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLN-FKAEPESET 520
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ ++W +P + I Y++ V++ + TI P G + + L P Y+
Sbjct: 521 SILLSW---TPP-RSDTIANYEL-VYKDGEHGEEQRITIEP-GTSYR--LQGLKPNSLYY 572
Query: 181 MRVLAFSNGGDGRMSSP--AITFQMGEEKEF 209
R+ A S G G ++ A T Q K F
Sbjct: 573 FRLAARSPQGLGASTAEISARTMQSMFAKNF 603
>FB|FBgn0021764 [details] [associations]
symbol:sdk "sidekick" species:7227 "Drosophila melanogaster"
[GO:0050931 "pigment cell differentiation" evidence=IMP]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IMP] [GO:0042675 "compound eye cone cell
differentiation" evidence=IMP] [GO:0005887 "integral to plasma
membrane" evidence=NAS] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014298
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 eggNOG:NOG12793 InterPro:IPR013098
Pfam:PF07679 GO:GO:0042675 GO:GO:0046533 EMBL:AL132792
GO:GO:0050931 KO:K16353 OMA:INLTWAQ EMBL:U88578 EMBL:BT031329
PIR:T13924 RefSeq:NP_001162630.1 RefSeq:NP_001162631.1
RefSeq:NP_477289.5 RefSeq:NP_477290.6 RefSeq:NP_599141.5
RefSeq:NP_599142.5 UniGene:Dm.4732 ProteinModelPortal:O97394
SMR:O97394 DIP:DIP-20914N MINT:MINT-322425 PRIDE:O97394
GeneID:31017 KEGG:dme:Dmel_CG5227 UCSC:CG5227-RA CTD:31017
FlyBase:FBgn0021764 InParanoid:O97394 OrthoDB:EOG4WSTRB ChiTaRS:sdk
GenomeRNAi:31017 NextBio:771519 Bgee:O97394 Uniprot:O97394
Length = 2224
Score = 185 (70.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 61/211 (28%), Positives = 93/211 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V R ++ + V W P++ + G G+ I Y K+ + Y+ R+
Sbjct: 1166 PKHPPFNVTVRAMSAQQLRVRWIPLQ--QTEWYGNPRGYNISY-KQLVKTPGTIKYVPRS 1222
Query: 62 ------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
T N ++ L+ T Y VK+ A N+ G ES+ +ERT P P V
Sbjct: 1223 VVIEDHTANSHVLDSLEEWTLYEVKMNACNDVGCSKESDTAVERTREAVPSYGPLDVQAN 1282
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
+ TTV V W V I GYKV D+ + TI P T + +L
Sbjct: 1283 ATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAAADRGQQVLHKTI-PNNATFTTTLTELKK 1341
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 206
YH++VLA++ G+G +S+P I Q E+
Sbjct: 1342 YVVYHVQVLAYTRLGNGALSTPPIRVQTFED 1372
Score = 168 (64.2 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 62/231 (26%), Positives = 106/231 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVT-----WNPIELIRENIRGRLIGHRIKY--WKEDNPEET 53
+PQ AP G GF +A +++ W P + E+ G+++G+ ++Y + +N +
Sbjct: 750 LPQEAPSGP-PVGFVGSARSMSEIITQWQPP--LEEHRNGQILGYILRYRLFGYNNVPWS 806
Query: 54 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 113
+ RN+ LI L Y V++ AYNN G G +E +T P+ PP+ V
Sbjct: 807 YQNITNEAQRNF-LIQELITWKDYIVQIAAYNNMGVGVYTEGSKIKTKEGVPEAPPTNVK 865
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---VD---QDMSRANDTIIPVGNTLD 167
++ IN T W +P GYK++ W+ +D +D+ R T+ P + +D
Sbjct: 866 VEAINSTAARCRWTPPNPQQINGINQGYKIQAWQRRLIDGEWRDIERRMKTVPP--SLID 923
Query: 168 ------ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 212
A + L Y++ VL F++ GDG SS M + + +G
Sbjct: 924 PLAEQTAILGGLEKFTEYNISVLCFTDPGDGVASSQVAVMTMDDVPDEVTG 974
Score = 152 (58.6 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 56/208 (26%), Positives = 89/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK-EDNPEETAVYYLSR 60
P V G+ +T++ V W+ +E N G+RI Y + D P TA+ +
Sbjct: 1572 PAVGVGGLKVVPITTTSVRVQWSALETALWNGDASTGGYRILYQQLSDFP--TALQSTPK 1629
Query: 61 T-----TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
T N ++ LQ D Y + V+ +N+ G GP + P P AV
Sbjct: 1630 TDVHGINENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPPAAVYVGEAVPTGEPRAVDAA 1689
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVR--VWEVDQDMS---RANDTIIPVGNTLDA-D 169
I+ T V + W+ S + I+GYK+ V Q + + + I V T +
Sbjct: 1690 PISSTEVRLLWKPPKQSMQNGDILGYKIYYLVTYSPQALEPGRKWEEEIEVVSATATSHS 1749
Query: 170 IVDLSPGKRYHMRVLAFSNGGDGRMSSP 197
+V L Y +++LAF+ GDG S+P
Sbjct: 1750 LVFLDKFTEYRIQLLAFNPAGDGPRSAP 1777
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 44/175 (25%), Positives = 82/175 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE--------E 52
+P P+ V + +ST + + W P + +N G ++G++I Y +P+ E
Sbjct: 1678 VPTGEPRAVDAAPISSTEVRLLWKPPKQSMQN--GDILGYKIYYLVTYSPQALEPGRKWE 1735
Query: 53 TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV 112
+ +S T + +L+ L T+Y ++++A+N AG+GP S T + P P + +
Sbjct: 1736 EEIEVVSATATSHSLVF-LDKFTEYRIQLLAFNPAGDGPRSAPI---TVKTLPGVPSAPL 1791
Query: 113 HIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNT 165
H++ I ++ VTW P F I+GY V +++ + V NT
Sbjct: 1792 HLRFSDITMQSLEVTWD--PPKFLNGEILGYLVTYETTEENEKFSKQVKQKVSNT 1844
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 46/201 (22%), Positives = 84/201 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P V + +ST + V W E+ R++ G++ G+++ Y D ++ +
Sbjct: 1271 VPSYGPLDVQANATSSTTVVVQWG--EVPRQHRNGQIDGYKVFYAAADRGQQVLHKTIPN 1328
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE-RTYRKAPQKPPSAVHIKGINP 119
+ L+ Y+V+V+AY G G S + +T+ P P S V ++
Sbjct: 1329 NATFTTTLTELKKYVVYHVQVLAYTRLGNGALSTPPIRVQTFEDTPGVP-SNVSFPDVSL 1387
Query: 120 TTVHVTWRY-VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
T + W V P+ + I+ Y+V M + P T A +L PGK
Sbjct: 1388 TMARIIWDVPVDPNGK---ILAYQVTYTLNGSAMLNYSREFPPSDRTFRA--TELLPGKY 1442
Query: 179 YHMRVLAFSNGGDGRMSSPAI 199
Y A + G G++++ +
Sbjct: 1443 YSFSCTAQTRLGWGKIATALV 1463
>UNIPROTKB|H0Y7Z9 [details] [associations]
symbol:PTPRF "Receptor-type tyrosine-protein phosphatase F"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 EMBL:AL583862 EMBL:AC092815
HGNC:HGNC:9670 ChiTaRS:PTPRF ProteinModelPortal:H0Y7Z9 PRIDE:H0Y7Z9
Ensembl:ENST00000414879 Bgee:H0Y7Z9 Uniprot:H0Y7Z9
Length = 1332
Score = 182 (69.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 50/172 (29%), Positives = 80/172 (46%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y ++ A ++ G G +
Sbjct: 64 RIIMYELVYWAAEDEDQQHKVTF--DPTSSYTL-EDLKPDTLYRFQLAARSDMGVGVFTP 120
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 154
RT + P PP V ++ +N T VHV W+ PS + I GY+V ++ R
Sbjct: 121 TIEARTAQSMPSGPPRKVEVEPLNSTAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPR 180
Query: 155 ANDTI--IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
I + + + I L+P Y + V A++ GDG S P I G
Sbjct: 181 GLPIIQDVMLAEAQETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTG 232
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 15 NSTAINVT---WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
++TA+N W+P + + G L+G+R++Y + D + + + +++ + GL
Sbjct: 243 STTAMNTALLQWHP----PKELPGELLGYRLQYCRADEARPNTIDF-GKDDQHFT-VTGL 296
Query: 72 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 131
T Y ++ A N AG G E E+ + RT P P +H+ G+ +T + W
Sbjct: 297 HKGTTYIFRLAAKNRAGLGEEFEKEI-RTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVL 355
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ II Y V +++ N T TL L P Y ++V A+++ G
Sbjct: 356 AERNGRIISYTVVFRDINSQQELQNITT-DTRFTLTG----LKPDTTYDIKVRAWTSKGS 410
Query: 192 GRMSSPAI 199
G +S P+I
Sbjct: 411 GPLS-PSI 417
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 51/196 (26%), Positives = 83/196 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
MP P+ V NSTA++V W P+ G++ G+++ Y + +N E + +
Sbjct: 130 MPSGPPRKVEVEPLNSTAVHVYWKLPVP---SKQHGQIRGYQVTYVRLENGEPRGLPIIQ 186
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A I GL P+T Y V V AY G+G S+ + T P +P +
Sbjct: 187 DVMLAEAQETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMISTTA 246
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
+N T + W P ++GY+++ D+ +R N TI + + L G
Sbjct: 247 MN--TALLQWH--PPKELPGELLGYRLQYCRADE--ARPN-TIDFGKDDQHFTVTGLHKG 299
Query: 177 KRYHMRVLAFSNGGDG 192
Y R+ A + G G
Sbjct: 300 TTYIFRLAAKNRAGLG 315
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + G ++ + W+P L N GR+I + + + ++ N ++ + ++
Sbjct: 328 LPSGFPQNLHVTGLTTSTTELAWDPPVLAERN--GRIISYTVVF-RDINSQQE-LQNITT 383
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TR + GL+PDT Y +KV A+ + G GP S RT Q + T
Sbjct: 384 DTR--FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTM-PVEQVFAKNFRVAAAMKT 440
Query: 121 TVHVTWRYVSPSFEEE-PI-IGYKVRVWEVD 149
+V ++W V S++ P I Y + EVD
Sbjct: 441 SVLLSWE-VPDSYKSAVPFKILYNGQSVEVD 470
>UNIPROTKB|Q12860 [details] [associations]
symbol:CNTN1 "Contactin-1" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0001948 "glycoprotein binding"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0010765 "positive regulation of sodium ion
transport" evidence=IEA] [GO:0010976 "positive regulation of neuron
projection development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0005886 Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 GO:GO:0031225 GO:GO:0030246
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 GO:GO:0007219 GO:GO:0010628
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG051047 CTD:1272
eggNOG:NOG293951 KO:K06759 EMBL:Z21488 EMBL:U07819 EMBL:U07820
EMBL:AK289544 EMBL:AK289698 EMBL:BC036569 IPI:IPI00029751
IPI:IPI00216641 IPI:IPI00479304 PIR:A54744 PIR:S15394
RefSeq:NP_001242992.1 RefSeq:NP_001242993.1 RefSeq:NP_001834.2
RefSeq:NP_778203.1 UniGene:Hs.143434 UniGene:Hs.741112 PDB:2EE2
PDB:3S97 PDBsum:2EE2 PDBsum:3S97 ProteinModelPortal:Q12860
SMR:Q12860 DIP:DIP-59714N IntAct:Q12860 STRING:Q12860
PhosphoSite:Q12860 DMDM:2497301 PaxDb:Q12860 PRIDE:Q12860
DNASU:1272 Ensembl:ENST00000347616 Ensembl:ENST00000348761
Ensembl:ENST00000360099 Ensembl:ENST00000547702
Ensembl:ENST00000547849 Ensembl:ENST00000551295 GeneID:1272
KEGG:hsa:1272 UCSC:uc001rmm.1 UCSC:uc001rmn.1 UCSC:uc001rmo.3
GeneCards:GC12P041086 HGNC:HGNC:2171 HPA:CAB025200 HPA:HPA041060
MIM:600016 MIM:612540 neXtProt:NX_Q12860 Orphanet:210163
PharmGKB:PA26685 InParanoid:Q12860 OMA:DTQYFIE PhylomeDB:Q12860
EvolutionaryTrace:Q12860 GenomeRNAi:1272 NextBio:5153
ArrayExpress:Q12860 Bgee:Q12860 CleanEx:HS_CNTN1
Genevestigator:Q12860 GermOnline:ENSG00000018236 Uniprot:Q12860
Length = 1018
Score = 179 (68.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 51/192 (26%), Positives = 87/192 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P VAP V G + + +TW P+ RE G G+ + + D E V +
Sbjct: 706 PNVAPSDVGGGGGRNRELTITWAPLS--REYHYGNNFGYIVAFKPFDGEEWKKVTVTNPD 763
Query: 62 TRNWA-LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T + + P T + VKV A+NN G+GP S + + + AP + P+ V +K ++ +
Sbjct: 764 TGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSS 823
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ V W +V E+ + Y++R W D A + + A + +L P +Y
Sbjct: 824 EISVHWEHVL----EKIVESYQIRYWAA-HDKEEAANRVQVTSQEYSARLENLLPDTQYF 878
Query: 181 MRVLAFSNGGDG 192
+ V A ++ G G
Sbjct: 879 IEVGACNSAGCG 890
Score = 169 (64.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 60/201 (29%), Positives = 100/201 (49%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP V + +S+ I+V W E + E I + ++I+YW + EE A + T
Sbjct: 808 PSEAPTEVGVKVLSSSEISVHW---EHVLEKI---VESYQIRYWAAHDKEEAA-NRVQVT 860
Query: 62 TRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
++ + A + L PDT+Y+++V A N+AG GP S+ +E +KAP P + I +
Sbjct: 861 SQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDM-IEAFTKKAPPSQPPRI-ISSVRSG 918
Query: 121 TVHV-TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ ++ TW +V E + GYKV Q + T ++++ I G+ Y
Sbjct: 919 SRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTH---KHSIEVPIP--RDGE-Y 972
Query: 180 HMRVLAFSNGGDGRMSSPAIT 200
+ V A S+GGDG +S I+
Sbjct: 973 VVEVRAHSDGGDGVVSQVKIS 993
>UNIPROTKB|F1P5C5 [details] [associations]
symbol:NRCAM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001525 "angiogenesis" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007417 "central nervous system
development" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0010975 "regulation of neuron projection
development" evidence=IEA] [GO:0016337 "cell-cell adhesion"
evidence=IEA] [GO:0019227 "neuronal action potential propagation"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030506 "ankyrin
binding" evidence=IEA] [GO:0031290 "retinal ganglion cell axon
guidance" evidence=IEA] [GO:0045162 "clustering of voltage-gated
sodium channels" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0005886 GO:GO:0008104
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045202 GO:GO:0016337 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR026966 Pfam:PF13882 GeneTree:ENSGT00690000101868
IPI:IPI00585827 OMA:YANISWE EMBL:AC147968 EMBL:AADN02010046
Ensembl:ENSGALT00000015492 ArrayExpress:F1P5C5 Uniprot:F1P5C5
Length = 1284
Score = 180 (68.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 55/209 (26%), Positives = 98/209 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS- 59
+P VAP V NST V W+P+ L +++RG L G+++ YWK + + ++
Sbjct: 820 LPMVAPGNVQVHVINSTLAKVHWDPVPL--KSVRGHLQGYKVYYWKVQSLSRRSKRHVEK 877
Query: 60 -----RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
R + + ++ GL+P + Y + V N GEGP S + +T P PPS + I
Sbjct: 878 KILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKVFKTPEGVPS-PPSFLKI 936
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIVD 172
NPT +T + SP+ + Y ++ ++ ++ + IP N + +
Sbjct: 937 T--NPTLDSLTLEWGSPTHPNGVLTSYILKFQPINNTHELGPLVEIRIPA-NESSLILKN 993
Query: 173 LSPGKRYHMRVLAFSNGGDG-RMSSPAIT 200
L+ RY A ++ G G +++ A+T
Sbjct: 994 LNYSTRYKFYFNAQTSVGSGSQITEEAVT 1022
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/210 (23%), Positives = 84/210 (40%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V G + +TW ++ + N G + +++ + ++D +E ++
Sbjct: 722 PDENPSNVQGIGSEPDNLVITWESLKGFQSNGPG--LQYKVSWRQKDVDDEWTSVVVANV 779
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ G Y +KV A N+ G PE + + P P V + IN T
Sbjct: 780 SKY--IVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTL 837
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSP 175
V W V + GYKV W+V Q +SR + + GN + L P
Sbjct: 838 AKVHWDPVPLKSVRGHLQGYKVYYWKV-QSLSRRSKRHVEKKILTFRGNKTFGMLPGLEP 896
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y + V + G+G +SP F+ E
Sbjct: 897 YSSYKLNVRVVNGKGEGP-ASPDKVFKTPE 925
>UNIPROTKB|P35331 [details] [associations]
symbol:P35331 "Neuronal cell adhesion molecule"
species:9031 "Gallus gallus" [GO:0045162 "clustering of
voltage-gated sodium channels" evidence=ISS] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0007417 "central nervous system
development" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0010975 "regulation of neuron projection
development" evidence=IEA] [GO:0019227 "neuronal action potential
propagation" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030247 "polysaccharide
binding" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0016338 "calcium-independent cell-cell adhesion"
evidence=IDA] [GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=IDA] [GO:0007156 "homophilic cell adhesion" evidence=IDA]
[GO:0007158 "neuron cell-cell adhesion" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0050839
"cell adhesion molecule binding" evidence=IPI] [GO:0030506 "ankyrin
binding" evidence=ISS] [GO:0005911 "cell-cell junction"
evidence=IDA] [GO:0030246 "carbohydrate binding" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0008104 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030247 GO:GO:0030424 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045202 GO:GO:0005911 GO:GO:0045162 Reactome:REACT_115433
GO:GO:0016339 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0007158 GO:GO:0030506 GO:GO:0016338 HOGENOM:HOG000231380
HOVERGEN:HBG000144 InterPro:IPR026966 Pfam:PF13882 eggNOG:NOG293951
EMBL:X58482 EMBL:L08960 IPI:IPI00573864 IPI:IPI00578409
IPI:IPI00585827 IPI:IPI00593270 IPI:IPI00596613 PIR:A39640
PIR:A43425 RefSeq:NP_990597.1 UniGene:Gga.40201
ProteinModelPortal:P35331 SMR:P35331 IntAct:P35331 STRING:P35331
GeneID:396202 KEGG:gga:396202 CTD:4897 InParanoid:P35331 KO:K06756
NextBio:20816254 Uniprot:P35331
Length = 1284
Score = 180 (68.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 55/209 (26%), Positives = 98/209 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS- 59
+P VAP V NST V W+P+ L +++RG L G+++ YWK + + ++
Sbjct: 820 LPMVAPGNVQVHVINSTLAKVHWDPVPL--KSVRGHLQGYKVYYWKVQSLSRRSKRHVEK 877
Query: 60 -----RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
R + + ++ GL+P + Y + V N GEGP S + +T P PPS + I
Sbjct: 878 KILTFRGNKTFGMLPGLEPYSSYKLNVRVVNGKGEGPASPDKVFKTPEGVPS-PPSFLKI 936
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIVD 172
NPT +T + SP+ + Y ++ ++ ++ + IP N + +
Sbjct: 937 T--NPTLDSLTLEWGSPTHPNGVLTSYILKFQPINNTHELGPLVEIRIPA-NESSLILKN 993
Query: 173 LSPGKRYHMRVLAFSNGGDG-RMSSPAIT 200
L+ RY A ++ G G +++ A+T
Sbjct: 994 LNYSTRYKFYFNAQTSVGSGSQITEEAVT 1022
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/210 (23%), Positives = 84/210 (40%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V G + +TW ++ + N G + +++ + ++D +E ++
Sbjct: 722 PDENPSNVQGIGSEPDNLVITWESLKGFQSNGPG--LQYKVSWRQKDVDDEWTSVVVANV 779
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ G Y +KV A N+ G PE + + P P V + IN T
Sbjct: 780 SKY--IVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTL 837
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSP 175
V W V + GYKV W+V Q +SR + + GN + L P
Sbjct: 838 AKVHWDPVPLKSVRGHLQGYKVYYWKV-QSLSRRSKRHVEKKILTFRGNKTFGMLPGLEP 896
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y + V + G+G +SP F+ E
Sbjct: 897 YSSYKLNVRVVNGKGEGP-ASPDKVFKTPE 925
>MGI|MGI:1098266 [details] [associations]
symbol:Chl1 "cell adhesion molecule with homology to L1CAM"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002020 "protease binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0035640 "exploration behavior" evidence=IMP] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IDA]
[GO:0045177 "apical part of cell" evidence=IDA] [GO:0050890
"cognition" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1098266 GO:GO:0016021 GO:GO:0005886 GO:GO:0007411
GO:GO:0001764 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0050890
GO:GO:0030425 SUPFAM:SSF49265 GO:GO:0005578 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0045177
GO:GO:0008344 GO:GO:0007155 GO:GO:0043524 Reactome:REACT_127416
EMBL:CH466523 InterPro:IPR013098 Pfam:PF07679 CTD:10752
eggNOG:NOG256023 HOGENOM:HOG000231380 HOVERGEN:HBG000144 KO:K06758
OMA:WEAGDDH InterPro:IPR026966 Pfam:PF13882 EMBL:X94310
EMBL:AK040765 EMBL:AK048639 EMBL:AK053039 EMBL:AC153595
EMBL:AC153598 EMBL:AC161824 EMBL:BC131670 EMBL:BC131671
EMBL:AJ319655 EMBL:AJ319656 EMBL:AJ319657 IPI:IPI00222149
IPI:IPI00404529 IPI:IPI00831546 PIR:T42718 RefSeq:NP_031723.2
UniGene:Mm.251288 ProteinModelPortal:P70232 MINT:MINT-4106227
STRING:P70232 PhosphoSite:P70232 PaxDb:P70232 PRIDE:P70232
Ensembl:ENSMUST00000066905 GeneID:12661 KEGG:mmu:12661
GeneTree:ENSGT00690000101868 OrthoDB:EOG4RFKRR NextBio:281890
CleanEx:MM_CHL1 Genevestigator:P70232 GermOnline:ENSMUSG00000030077
Uniprot:P70232
Length = 1209
Score = 178 (67.7 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 56/217 (25%), Positives = 103/217 (47%)
Query: 2 PQVAPQGVFSRG--FNSTAINVTWNPIELIRENIRGRLIGHRIKYWK-------EDNPEE 52
P AP V R NST + VTW+ I +E + G L G++I +WK +P+E
Sbjct: 809 PSTAP--VIQRVDVMNSTLVKVTWSSIP--KETVHGLLRGYQINWWKTKSLLDGRTHPKE 864
Query: 53 TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV 112
+ S RN ++ L P +++++ V+AYN+ G GPESE Y+ +T P++P
Sbjct: 865 VNILRFSGQ-RNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPSFLK 923
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADI 170
IK ++ T ++W P + GY ++ ++ ++ N+ + + +
Sbjct: 924 VIK-VDKDTATLSWGL--PKKLNGNLTGYLLQYQIINDTYELGELNEINVTTPSKSSWHL 980
Query: 171 VDLSPGKRYHMRVLAFSNGGDGR-MSSPAITFQMGEE 206
+L+ +Y + A ++ G G+ +S T G +
Sbjct: 981 SNLNSTTKYKFYLRACTSRGCGKPISEEGATLGEGSK 1017
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/211 (23%), Positives = 85/211 (40%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ + + + + W P++ + +N G + +++ + + PEE +
Sbjct: 711 PDKNPQNIRVQASQPKEMIIKWEPLKSMEQNGPG--LEYKVSWKPQGAPEE----WEEEI 764
Query: 62 TRNWALIVGLQPDT--KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
N L V + P Y VKV A N G P+ + + P P + +N
Sbjct: 765 VTNHTLRV-MTPTVYAPYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNS 823
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS-RANDTIIPV----GNTLDADIVDLS 174
T V VTW + + GY++ W+ + R + + + G + L
Sbjct: 824 TLVKVTWSSIPKETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLD 883
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
P +H+ VLA+++ G G S P I FQ E
Sbjct: 884 PFSEFHLTVLAYNSKGAGPESEPYI-FQTPE 913
>MGI|MGI:104750 [details] [associations]
symbol:Nrcam "neuron-glia-CAM-related cell adhesion molecule"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0008104 "protein localization"
evidence=IDA] [GO:0010975 "regulation of neuron projection
development" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IDA] [GO:0019227 "neuronal action
potential propagation" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0030506 "ankyrin binding" evidence=ISO]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
[GO:0043194 "axon initial segment" evidence=ISO] [GO:0045162
"clustering of voltage-gated sodium channels" evidence=ISO;IMP]
[GO:0045202 "synapse" evidence=IDA] [GO:0086080 "protein binding
involved in heterotypic cell-cell adhesion" evidence=IGI]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:104750 GO:GO:0016021
GO:GO:0005886 GO:GO:0008104 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003006 PROSITE:PS00290 GO:GO:0030424 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045202 GO:GO:0007417 GO:GO:0001525 Reactome:REACT_127416
GO:GO:0045162 GO:GO:0010975 InterPro:IPR013098 Pfam:PF07679
GO:GO:0031290 GO:GO:0030506 GO:GO:0019227 HOGENOM:HOG000231380
HOVERGEN:HBG000144 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 eggNOG:NOG293951 GO:GO:0086080
CTD:4897 KO:K06756 ChiTaRS:NRCAM EMBL:AJ543321 EMBL:AK122252
EMBL:AK039322 EMBL:AK048567 EMBL:AK045259 IPI:IPI00226573
IPI:IPI00338880 IPI:IPI00395042 IPI:IPI00395043 IPI:IPI00403536
RefSeq:NP_001139503.1 RefSeq:NP_795904.3 UniGene:Mm.208439
ProteinModelPortal:Q810U4 SMR:Q810U4 MINT:MINT-3090404
STRING:Q810U4 PhosphoSite:Q810U4 PaxDb:Q810U4 PRIDE:Q810U4
DNASU:319504 Ensembl:ENSMUST00000020939 Ensembl:ENSMUST00000110748
GeneID:319504 KEGG:mmu:319504 UCSC:uc007nls.2 UCSC:uc007nlt.2
UCSC:uc007nlu.2 UCSC:uc007nlw.1 OMA:YANISWE OrthoDB:EOG4GTKC3
NextBio:394866 Bgee:Q810U4 CleanEx:MM_NRCAM Genevestigator:Q810U4
GermOnline:ENSMUSG00000020598 Uniprot:Q810U4
Length = 1256
Score = 176 (67.0 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 59/210 (28%), Positives = 98/210 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P VAP V NST V W+P+ +++RG L G+RI YWK + + ++ +
Sbjct: 838 LPMVAPGNVRVSVVNSTLAEVHWDPVP--PKSVRGHLQGYRIYYWKTQSSSKRNRRHIEK 895
Query: 61 T------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH- 113
T+ ++ GLQP + Y + V N GEGP S +R + P+ PSA
Sbjct: 896 KILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGPAST---DRGFH-TPEGVPSAPSS 951
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIV 171
+K +NPT +T + PS + Y ++ ++ ++ D IP T +
Sbjct: 952 LKIVNPTLDSLTLEWDPPSHPNGILTEYILQYQPINSTHELGPLVDLKIPANKTRWT-LK 1010
Query: 172 DLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 200
+L+ RY A ++ G G +++ AIT
Sbjct: 1011 NLNFSTRYKFYFYAQTSVGPGSQITEEAIT 1040
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 44/201 (21%), Positives = 78/201 (38%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V G + +TW P+ + N G + +++ + ++D +E ++
Sbjct: 740 PDQNPMAVEGLGTEPDNLVITWKPLNGFQSNGPG--LQYKVSWRQKDGDDEWTSVVVANV 797
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ G Y +KV A N+ G PE + + P P V + +N T
Sbjct: 798 SKY--IVSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTL 855
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSP 175
V W V P + GY++ W+ Q S+ N I G + L P
Sbjct: 856 AEVHWDPVPPKSVRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGTKTHGMLPGLQP 914
Query: 176 GKRYHMRVLAFSNGGDGRMSS 196
Y + V + G+G S+
Sbjct: 915 YSHYALNVRVVNGKGEGPAST 935
>UNIPROTKB|E1BLM2 [details] [associations]
symbol:E1BLM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045202 "synapse" evidence=IEA] [GO:0045162 "clustering
of voltage-gated sodium channels" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IEA] [GO:0030506
"ankyrin binding" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0019227 "neuronal action potential propagation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0010975
"regulation of neuron projection development" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0005886
GO:GO:0008104 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003006 PROSITE:PS00290 GO:GO:0030424 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045202 GO:GO:0007417 GO:GO:0001525 GO:GO:0016337
GO:GO:0045162 GO:GO:0010975 InterPro:IPR013098 Pfam:PF07679
GO:GO:0031290 GO:GO:0019227 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 OMA:YANISWE EMBL:DAAA02010597
EMBL:DAAA02010598 IPI:IPI00725990 Ensembl:ENSBTAT00000008864
Uniprot:E1BLM2
Length = 1308
Score = 176 (67.0 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 61/211 (28%), Positives = 95/211 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-----NPEETAV 55
+P VAP V NST V W+P+ L ++IRG L G+RI YWK N
Sbjct: 844 LPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHLQGYRIYYWKAQSSLTRNRRHIEK 901
Query: 56 YYLS-RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR--KAPQKPPSAV 112
L+ + ++ ++ GL+P + Y + V N GEGP S + T K P P S
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDKVFNTPEGVKVPSAPSS-- 959
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADI 170
+K +NPT +T + PS + Y ++ ++ ++ D IP T +
Sbjct: 960 -LKIVNPTLDSLTLEWEPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPANKTRWI-L 1017
Query: 171 VDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 200
+L+ RY A + G G +++ AIT
Sbjct: 1018 KNLNFSTRYKFYFYAQTAAGSGIQITEEAIT 1048
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 47/220 (21%), Positives = 85/220 (38%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V G + +TW P+ N G + +++ + ++D +E ++
Sbjct: 746 PDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPG--LQYKVSWRQKDGDDEWTSVVVANV 803
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ G Y +KV A N+AG PE + + P P V + +N T
Sbjct: 804 SKY--IVSGTPTFVPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVRVNVVNSTL 861
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR----ANDTIIPV-GNTLDADIVDLSPG 176
V W V + GY++ W+ ++R I+ G+ + L P
Sbjct: 862 AEVHWDPVPLKSIRGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPF 921
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPAL 216
Y + V + G+G +SP F E + S +L
Sbjct: 922 SHYTLNVRVVNGKGEGP-ASPDKVFNTPEGVKVPSAPSSL 960
>UNIPROTKB|P32004 [details] [associations]
symbol:L1CAM "Neural cell adhesion molecule L1"
species:9606 "Homo sapiens" [GO:0008219 "cell death" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=IEA] [GO:0007159 "leukocyte cell-cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IEA] [GO:0033631 "cell-cell adhesion mediated by
integrin" evidence=IEA] [GO:0033691 "sialic acid binding"
evidence=IEA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0043621 "protein
self-association" evidence=IEA] [GO:0050850 "positive regulation of
calcium-mediated signaling" evidence=IEA] [GO:0007399 "nervous
system development" evidence=TAS] [GO:0007155 "cell adhesion"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] [GO:0050900 "leukocyte migration"
evidence=TAS] [GO:0006935 "chemotaxis" evidence=TAS]
Reactome:REACT_604 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005886 Reactome:REACT_111045 GO:GO:0007411
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897 GO:GO:0007596
GO:GO:0050900 GO:GO:0008219 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0042734 GO:GO:0043195 GO:GO:0050850 EMBL:U52111 GO:GO:0007166
GO:GO:0033631 GO:GO:0033691 GO:GO:0007157 InterPro:IPR013098
Pfam:PF07679 GO:GO:0007156 GO:GO:0007159 GO:GO:0022409
GO:GO:0034109 HOGENOM:HOG000231380 HOVERGEN:HBG000144
InterPro:IPR026966 Pfam:PF13882 eggNOG:NOG293951 Orphanet:388
EMBL:U52112 EMBL:X59847 EMBL:M77640 EMBL:M74387 EMBL:Z29373
EMBL:BC025843 EMBL:BC126229 EMBL:BC136447 EMBL:M55271 EMBL:X58775
EMBL:X58776 IPI:IPI00334532 IPI:IPI00871467 PIR:A41060
RefSeq:NP_000416.1 RefSeq:NP_001137435.1 RefSeq:NP_076493.1
UniGene:Hs.522818 ProteinModelPortal:P32004 SMR:P32004
IntAct:P32004 MINT:MINT-1369985 STRING:P32004 PhosphoSite:P32004
DMDM:1705571 PaxDb:P32004 PRIDE:P32004 Ensembl:ENST00000361699
Ensembl:ENST00000370057 Ensembl:ENST00000370060 GeneID:3897
KEGG:hsa:3897 UCSC:uc004fjb.3 UCSC:uc004fjc.3 CTD:3897
GeneCards:GC0XM153126 HGNC:HGNC:6470 HPA:CAB010896 HPA:HPA005830
MIM:303350 MIM:304100 MIM:307000 MIM:308840 neXtProt:NX_P32004
Orphanet:2182 Orphanet:2466 Orphanet:1497 PharmGKB:PA30259
KO:K06550 OrthoDB:EOG4NGGKS PhylomeDB:P32004 ChiTaRS:L1CAM
GenomeRNAi:3897 NextBio:15299 PMAP-CutDB:P32004 ArrayExpress:P32004
Bgee:P32004 CleanEx:HS_L1CAM Genevestigator:P32004
GermOnline:ENSG00000198910 Uniprot:P32004
Length = 1257
Score = 174 (66.3 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/197 (24%), Positives = 93/197 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR- 60
PQ P+ NS+A+ V W P++L + ++G L G+ + YW+E + + + ++ +
Sbjct: 812 PQAIPELEGIEILNSSAVLVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKD 869
Query: 61 ---TTRNWALIV--GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
N ++ GL+P + Y+++V A+N G GP SE + T P P A+H++
Sbjct: 870 HVVVPANTTSVILSGLRPYSSYHLEVQAFNGRGSGPASE-FTFSTPEGVPGHP-EALHLE 927
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
+ T++ + W+ P + GY + +D+ + ++ DLSP
Sbjct: 928 CQSNTSLLLRWQ--PPLSHNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSP 985
Query: 176 GKRYHMRVLAFSNGGDG 192
RY ++ A + G G
Sbjct: 986 HLRYRFQLQATTKEGPG 1002
Score = 162 (62.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 54/210 (25%), Positives = 88/210 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G +T + +TW P+ + N + +R++ W+ P+ T + +
Sbjct: 714 PEKNPVDVKGEGNETTNMVITWKPLRWMDWN--APQVQYRVQ-WR---PQGTRGPWQEQI 767
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ L+V Y +KV A N+ G+GPE + + + PQ P I+ +N +
Sbjct: 768 VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSS 827
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSP 175
V V WR V + + + GY V W + D ++ NT + L P
Sbjct: 828 AVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 887
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
YH+ V AF+ G G S TF E
Sbjct: 888 YSSYHLEVQAFNGRGSGPASE--FTFSTPE 915
>UNIPROTKB|F1S293 [details] [associations]
symbol:L1CAM "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050850 "positive regulation of calcium-mediated
signaling" evidence=IEA] [GO:0043621 "protein self-association"
evidence=IEA] [GO:0043195 "terminal bouton" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0033691 "sialic acid binding"
evidence=IEA] [GO:0033631 "cell-cell adhesion mediated by integrin"
evidence=IEA] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IEA] [GO:0009897 "external side of plasma
membrane" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007159 "leukocyte cell-cell adhesion" evidence=IEA]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0042734 GO:GO:0043195
GO:GO:0050850 GO:GO:0007166 GO:GO:0033631 GO:GO:0033691
GO:GO:0007157 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0007159 GO:GO:0022409 GO:GO:0034109 InterPro:IPR026966
Pfam:PF13882 GeneTree:ENSGT00690000101868 CTD:3897 KO:K06550
OMA:MDWNAPQ EMBL:CU915581 RefSeq:XP_003135542.2
Ensembl:ENSSSCT00000013979 GeneID:100525324 KEGG:ssc:100525324
Uniprot:F1S293
Length = 1257
Score = 174 (66.3 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 57/210 (27%), Positives = 94/210 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + + VTW P+ + N + +R++ W+ P+ T + +
Sbjct: 714 PEKNPVDVKGEGNETNNMVVTWKPLRWMDWN--APQVQYRVQ-WR---PQGTQGAWQEQI 767
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ L+V Y +KV A N+ G+GPE + + + PQ P I+ +N +
Sbjct: 768 VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSS 827
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVW-EVDQDM-SRAN----DTIIPVGNTLDADIVDLS 174
TV V WR++ P + + GY V W E Q S+ + ++P N A + L
Sbjct: 828 TVLVRWRHLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPA-NATSAILGGLR 886
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
P YH+ V AF+ G G SS + + G
Sbjct: 887 PYSTYHLEVQAFNGRGPGPASSRSFSTPEG 916
Score = 157 (60.3 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 53/219 (24%), Positives = 99/219 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR- 60
PQ +P+ + NS+ + V W ++ ++G L G+ + YW E + + + ++ +
Sbjct: 812 PQASPELEEIQILNSSTVLVRWRHLD--PGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKG 869
Query: 61 -----TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
A++ GL+P + Y+++V A+N G GP S R T P P A+H++
Sbjct: 870 HVVVPANATSAILGGLRPYSTYHLEVQAFNGRGPGPASSRSFS-TPEGVPGHP-EALHLE 927
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
+ T++ + W+ P + GY + +D + +P ++ +LSP
Sbjct: 928 CQSDTSLLLHWQ--PPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSP 985
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
RY ++ A + G G AI + G F SG+P
Sbjct: 986 HLRYRFQLQATTKEGPGE----AIVRE-GSTMAF-SGTP 1018
>UNIPROTKB|F2Z3B8 [details] [associations]
symbol:PTPRF "Receptor-type tyrosine-protein phosphatase F"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 EMBL:AL583862 EMBL:AC092815
HGNC:HGNC:9670 ChiTaRS:PTPRF IPI:IPI00853550
ProteinModelPortal:F2Z3B8 SMR:F2Z3B8 Ensembl:ENST00000422171
UCSC:uc001cjv.3 ArrayExpress:F2Z3B8 Bgee:F2Z3B8 Uniprot:F2Z3B8
Length = 1266
Score = 174 (66.3 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 40 HRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 98
+ + YW ED ++ V + T ++ L L+PDT Y ++ A ++ G G +
Sbjct: 2 YELVYWAAEDEDQQHKVTF--DPTSSYTL-EDLKPDTLYRFQLAARSDMGVGVFTPTIEA 58
Query: 99 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 158
RT + P PP V ++ +N T VHV W+ PS + I GY+V ++ R
Sbjct: 59 RTAQSMPSGPPRKVEVEPLNSTAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPRGLPI 118
Query: 159 I--IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
I + + + I L+P Y + V A++ GDG S P I G
Sbjct: 119 IQDVMLAEAQETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTG 166
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 15 NSTAINVT---WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
++TA+N W+P + + G L+G+R++Y + D + + + +++ + GL
Sbjct: 177 STTAMNTALLQWHP----PKELPGELLGYRLQYCRADEARPNTIDF-GKDDQHFT-VTGL 230
Query: 72 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 131
T Y ++ A N AG G E E+ + RT P P +H+ G+ +T + W
Sbjct: 231 HKGTTYIFRLAAKNRAGLGEEFEKEI-RTPEDLPSGFPQNLHVTGLTTSTTELAWDPPVL 289
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ II Y V +++ N T TL L P Y ++V A+++ G
Sbjct: 290 AERNGRIISYTVVFRDINSQQELQNITT-DTRFTLTG----LKPDTTYDIKVRAWTSKGS 344
Query: 192 GRMSSPAI 199
G +S P+I
Sbjct: 345 GPLS-PSI 351
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 51/196 (26%), Positives = 83/196 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
MP P+ V NSTA++V W P+ G++ G+++ Y + +N E + +
Sbjct: 64 MPSGPPRKVEVEPLNSTAVHVYWKLPVP---SKQHGQIRGYQVTYVRLENGEPRGLPIIQ 120
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A I GL P+T Y V V AY G+G S+ + T P +P +
Sbjct: 121 DVMLAEAQETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTTGAVPGRPTMMISTTA 180
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
+N T + W P ++GY+++ D+ +R N TI + + L G
Sbjct: 181 MN--TALLQWH--PPKELPGELLGYRLQYCRADE--ARPN-TIDFGKDDQHFTVTGLHKG 233
Query: 177 KRYHMRVLAFSNGGDG 192
Y R+ A + G G
Sbjct: 234 TTYIFRLAAKNRAGLG 249
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 41/151 (27%), Positives = 70/151 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + G ++ + W+P L N GR+I + + + ++ N ++ + ++
Sbjct: 262 LPSGFPQNLHVTGLTTSTTELAWDPPVLAERN--GRIISYTVVF-RDINSQQE-LQNITT 317
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TR + GL+PDT Y +KV A+ + G GP S RT Q + T
Sbjct: 318 DTR--FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTM-PVEQVFAKNFRVAAAMKT 374
Query: 121 TVHVTWRYVSPSFEEE-PI-IGYKVRVWEVD 149
+V ++W V S++ P I Y + EVD
Sbjct: 375 SVLLSWE-VPDSYKSAVPFKILYNGQSVEVD 404
>FB|FBgn0263219 [details] [associations]
symbol:Dscam4 "Down syndrome cell adhesion molecule 4"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM] [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 EMBL:AE014296 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00690000101869
UniGene:Dm.21615 GeneID:2769008 KEGG:dme:Dmel_CG42330 CTD:2769008
FlyBase:FBgn0263219 GenomeRNAi:2769008 NextBio:849087
RefSeq:NP_001036596.2 RefSeq:NP_001137908.1 SMR:Q0E8G9
EnsemblMetazoa:FBtr0299839 EnsemblMetazoa:FBtr0299840
InParanoid:Q0E8G9 OMA:FNHRQRA Uniprot:Q0E8G9
Length = 1918
Score = 176 (67.0 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 55/207 (26%), Positives = 92/207 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW-------KEDNPEET 53
+P P V + +ST I VTW+ E R++ G L+G+ + Y KE NP +
Sbjct: 1009 VPSGPPLAVRAEPKSSTEIFVTWDAPE--RDHWNGILLGYYVGYQMSLTPEDKEVNPTQG 1066
Query: 54 AVYYLSRTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 110
+ ++ ++ L T+Y+V V AY + G GP S+ +T P PP
Sbjct: 1067 FSFKTVEVRSHFGGETVLANLNKFTQYHVIVQAYTSQGSGPPSKEIAVQTMEDVPSSPPE 1126
Query: 111 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADI 170
+ + T++++TW + I GYKV VD+ + + ++ N I
Sbjct: 1127 SPQCDVLGSTSIYITWSPPDIDGQNGKIKGYKVFYISVDE-LYETDPEVVKSTNQY-VTI 1184
Query: 171 VDLSPGKRYHMRVLAFSNGGDGRMSSP 197
+L Y + VLA++ GDG + P
Sbjct: 1185 ENLRKYTNYTVWVLAYTKVGDGMKTKP 1211
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/141 (26%), Positives = 68/141 (48%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P+ ST+I +TW+P ++ +N G++ G+++ Y D ET + +
Sbjct: 1120 VPSSPPESPQCDVLGSTSIYITWSPPDIDGQN--GKIKGYKVFYISVDELYETDPEVV-K 1176
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+T + I L+ T Y V V+AY G+G +++ + RT+ P P + IK I +
Sbjct: 1177 STNQYVTIENLRKYTNYTVWVLAYTKVGDGMKTKPFYCRTHEDVPSAPQA---IKAIPAS 1233
Query: 121 TVHVTWRYVSPSFEEEPIIGY 141
+ + ++ P I GY
Sbjct: 1234 SSKIIISWLPPDLPNGDITGY 1254
>UNIPROTKB|O00533 [details] [associations]
symbol:CHL1 "Neural cell adhesion molecule L1-like protein"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002020 "protease
binding" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] [GO:0050890
"cognition" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005886 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0001764 GO:GO:0007165 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0050890 GO:GO:0030425 SUPFAM:SSF49265 GO:GO:0005578
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0045177 GO:GO:0008344 GO:GO:0007155 InterPro:IPR013098
Pfam:PF07679 EMBL:AF002246 EMBL:AB209329 EMBL:AC011609
EMBL:AC026187 EMBL:BC104918 EMBL:BC143496 IPI:IPI00299059
IPI:IPI00783390 RefSeq:NP_001240316.1 RefSeq:NP_006605.2
UniGene:Hs.148909 UniGene:Hs.731409 ProteinModelPortal:O00533
SMR:O00533 IntAct:O00533 STRING:O00533 PhosphoSite:O00533
PaxDb:O00533 PRIDE:O00533 Ensembl:ENST00000256509
Ensembl:ENST00000397491 GeneID:10752 KEGG:hsa:10752 UCSC:uc003bot.3
UCSC:uc003bou.3 CTD:10752 GeneCards:GC03P000213 H-InvDB:HIX0030810
HGNC:HGNC:1939 HPA:CAB026120 HPA:HPA003345 MIM:607416
neXtProt:NX_O00533 Orphanet:1620 PharmGKB:PA26470 eggNOG:NOG256023
HOGENOM:HOG000231380 HOVERGEN:HBG000144 KO:K06758 OMA:WEAGDDH
ChiTaRS:CHL1 GenomeRNAi:10752 NextBio:40833 ArrayExpress:O00533
Bgee:O00533 CleanEx:HS_CHL1 Genevestigator:O00533
GermOnline:ENSG00000134121 InterPro:IPR026966 Pfam:PF13882
Uniprot:O00533
Length = 1208
Score = 173 (66.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 53/203 (26%), Positives = 98/203 (48%)
Query: 2 PQVAP--QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK-------EDNPEE 52
P AP GV NST + VTW+ + ++ + GRL G++I +WK +P+E
Sbjct: 809 PDTAPVIHGVDV--INSTLVKVTWSTVP--KDRVHGRLKGYQINWWKTKSLLDGRTHPKE 864
Query: 53 TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV 112
+ S RN ++ L +++++ V+AYN+ G GPESE Y+ +T P++P
Sbjct: 865 VNILRFSGQ-RNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYIFQTPEGVPEQPTFLK 923
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADI 170
IK ++ T ++W P + GY ++ ++ ++ ND I + +
Sbjct: 924 VIK-VDKDTATLSWGL--PKKLNGNLTGYLLQYQIINDTYEIGELNDINITTPSKPSWHL 980
Query: 171 VDLSPGKRYHMRVLAFSNGGDGR 193
+L+ +Y + A ++ G G+
Sbjct: 981 SNLNATTKYKFYLRACTSQGCGK 1003
Score = 150 (57.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 55/212 (25%), Positives = 88/212 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ + + + + W P++ + +N G + +R+ WK P+ V + T
Sbjct: 711 PDRNPQNIRVQASQPKEMIIKWEPLKSMEQNGPG--LEYRVT-WK---PQGAPVEWEEET 764
Query: 62 TRNWALIVGLQPDT--KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH-IKGIN 118
N L V + P Y VKV A N G GP+ + + P P +H + IN
Sbjct: 765 VTNHTLRV-MTPAVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAP-VIHGVDVIN 822
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS-RANDTIIPV----GNTLDADIVDL 173
T V VTW V + GY++ W+ + R + + + G + L
Sbjct: 823 STLVKVTWSTVPKDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSL 882
Query: 174 SPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
+H+ VLA+++ G G S P I FQ E
Sbjct: 883 DAFSEFHLTVLAYNSKGAGPESEPYI-FQTPE 913
>UNIPROTKB|F1N898 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:AADN02062013 EMBL:AADN02062012
IPI:IPI00598900 Ensembl:ENSGALT00000016336 ArrayExpress:F1N898
Uniprot:F1N898
Length = 1500
Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 331 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 382
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY-VSPSFE 134
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W V P+ +
Sbjct: 383 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQGRMLSSTTMIIQWEEPVEPNGQ 442
Query: 135 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GY+V + ++ D +N V ++L + L + Y +RVLAF++ GDG +
Sbjct: 443 ---IRGYRV-YYTMEPDQPVSNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPL 498
Query: 195 SSPA-ITFQMG 204
S P + Q G
Sbjct: 499 SDPIQVKTQQG 509
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 57/214 (26%), Positives = 94/214 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V R +ST + + W E + N G++ G+R+ Y E P++ +
Sbjct: 412 PASAPRNVQGRMLSSTTMIIQWE--EPVEPN--GQIRGYRVYYTME--PDQPVSNWQKHN 465
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + +
Sbjct: 466 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-FRAEAKTE 524
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ ++W SP +E I+ Y++ E D + P T + L P Y
Sbjct: 525 TSIVLSW---SPP-RQEIIVKYELLFKEGDHGREVPRN-FEP---TTSFTVEGLKPNTEY 576
Query: 180 HMRVLAFSNGGDGRMSSPAI---TFQMGEEKEFK 210
R+ A S G G + P + T Q K FK
Sbjct: 577 VFRLAARSALGLGAFT-PEVRERTLQSILPKNFK 609
>UNIPROTKB|F1NWE3 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:AADN02062013 EMBL:AADN02062012
IPI:IPI00572439 Ensembl:ENSGALT00000006443 ArrayExpress:F1NWE3
Uniprot:F1NWE3
Length = 1500
Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 331 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 382
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY-VSPSFE 134
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W V P+ +
Sbjct: 383 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQGRMLSSTTMIIQWEEPVEPNGQ 442
Query: 135 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GY+V + ++ D +N V ++L + L + Y +RVLAF++ GDG +
Sbjct: 443 ---IRGYRV-YYTMEPDQPVSNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPL 498
Query: 195 SSPA-ITFQMG 204
S P + Q G
Sbjct: 499 SDPIQVKTQQG 509
Score = 127 (49.8 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 57/214 (26%), Positives = 94/214 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V R +ST + + W E + N G++ G+R+ Y E P++ +
Sbjct: 412 PASAPRNVQGRMLSSTTMIIQWE--EPVEPN--GQIRGYRVYYTME--PDQPVSNWQKHN 465
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + +
Sbjct: 466 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-FRAEAKTE 524
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ ++W SP +E I+ Y++ E D + P T + L P Y
Sbjct: 525 TSIVLSW---SPP-RQEIIVKYELLFKEGDHGREVPRN-FEP---TTSFTVEGLKPNTEY 576
Query: 180 HMRVLAFSNGGDGRMSSPAI---TFQMGEEKEFK 210
R+ A S G G + P + T Q K FK
Sbjct: 577 VFRLAARSALGLGAFT-PEVRERTLQSILPKNFK 609
>UNIPROTKB|F1N896 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00590000082937 EMBL:AADN02062013 EMBL:AADN02062012
IPI:IPI00812852 Ensembl:ENSGALT00000016338 ArrayExpress:F1N896
Uniprot:F1N896
Length = 1860
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/161 (27%), Positives = 72/161 (44%)
Query: 46 KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP 105
K P + +R+T L+ L+ T+Y + V+A+ G GPES + RT P
Sbjct: 603 KPSAPPQDIKCVSTRSTAILILLESLEKWTEYRITVVAHTEVGPGPESSPVIVRTDEDVP 662
Query: 106 QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--IPVG 163
PP V ++ +N T + V WR + + I GY+V ++ +R I I +
Sbjct: 663 SAPPRKVEVEVLNSTAIQVFWRSPVQNRQHGQIRGYQVHYVRMENGEARGLPQIKDIMLA 722
Query: 164 NTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
+ + I L P Y + V A++ GDG S P + G
Sbjct: 723 DAQEMVIAGLQPETAYSITVAAYTMKGDGARSKPKVVTTKG 763
Score = 173 (66.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T+I +TW+ + + +I ++ K +D P + TT ++ I GL P++
Sbjct: 331 ATSITITWDSGN--PDPVSYYVIEYKSK--SQDGPYQIKE---DITTTRYS-IGGLSPNS 382
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY-VSPSFE 134
+Y + V A N+ G+GP SE + RT +AP P V + ++ TT+ + W V P+ +
Sbjct: 383 EYEIWVSAVNSIGQGPPSESVVTRTGEQAPASAPRNVQGRMLSSTTMIIQWEEPVEPNGQ 442
Query: 135 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GY+V + ++ D +N V ++L + L + Y +RVLAF++ GDG +
Sbjct: 443 ---IRGYRV-YYTMEPDQPVSNWQKHNVDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPL 498
Query: 195 SSPA-ITFQMG 204
S P + Q G
Sbjct: 499 SDPIQVKTQQG 509
Score = 153 (58.9 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 48/155 (30%), Positives = 76/155 (49%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P P+ V NSTAI V W +P++ R++ G++ G+++ Y + +N E + +
Sbjct: 661 VPSAPPRKVEVEVLNSTAIQVFWRSPVQN-RQH--GQIRGYQVHYVRMENGEARGLPQIK 717
Query: 60 RTTRNWA---LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
A +I GLQP+T Y + V AY G+G S+ + T P KP +VH
Sbjct: 718 DIMLADAQEMVIAGLQPETAYSITVAAYTMKGDGARSKPKVVTTKGAVPGKPILSVHQTE 777
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 151
N T+ V W P E +IGY+++ D D
Sbjct: 778 EN--TLLVKWE--PPLDAEGQVIGYRLQFGRKDVD 808
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 46/198 (23%), Positives = 83/198 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P+ PQ + + S ++ W P L N G ++ + + Y + +P L
Sbjct: 859 IPKGYPQILEASNITSMSVQFGWLPPVLAERN--GAIVKYTVAYREAGSPGNPLEKDLPP 916
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ N + GL+P+T Y VK+ A+ + G GP S RT++ P +K + T
Sbjct: 917 SPENSYTLNGLKPNTAYDVKIRAHTSKGPGPYSPTVQYRTFQLDQAVLPKNFKVKMVTKT 976
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+V ++W + P P YK++ ++ D+ G T I +L P Y+
Sbjct: 977 SVLLSWEF--PENYNSPT-PYKIQYNGLNVDVD---------GRTTKKLITNLKPHTFYN 1024
Query: 181 MRVLAFSNGGDGRMSSPA 198
++ N G + A
Sbjct: 1025 FVLMNRGNSMGGLQQNVA 1042
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 51/193 (26%), Positives = 86/193 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP+ V R +ST + + W E + N G++ G+R+ Y E P++ +
Sbjct: 412 PASAPRNVQGRMLSSTTMIIQWE--EPVEPN--GQIRGYRVYYTME--PDQPVSNWQKHN 465
Query: 62 TRNWALI-VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L VG L D Y V+V+A+ + G+GP S+ +T + P +P + +
Sbjct: 466 VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMN-FRAEAKTE 524
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ ++W SP +E I+ Y++ E D + P T + L P Y
Sbjct: 525 TSIVLSW---SPP-RQEIIVKYELLFKEGDHGREVPRN-FEP---TTSFTVEGLKPNTEY 576
Query: 180 HMRVLAFSNGGDG 192
R+ A S G G
Sbjct: 577 VFRLAARSALGLG 589
Score = 36 (17.7 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 173 LSPGKRYHMRVLA 185
L PG+RY + +LA
Sbjct: 1164 LEPGQRYVIFILA 1176
>ZFIN|ZDB-GENE-020107-2 [details] [associations]
symbol:ptprfa "protein tyrosine phosphatase, receptor
type, f, a" species:7955 "Danio rerio" [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] [GO:0016791 "phosphatase
activity" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004721 "phosphoprotein phosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 SMART:SM00194
ZFIN:ZDB-GENE-020107-2 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0004725
GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679 UniGene:Dr.12854
EMBL:JQ414007 UniGene:Dr.15672 Bgee:H9CWQ2 Uniprot:H9CWQ2
Length = 1894
Score = 174 (66.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 55/207 (26%), Positives = 88/207 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW--KEDNPEETAVYYLS 59
P PQ V +S++I V+W + + G ++ + + Y ++ E V +
Sbjct: 606 PSAPPQEVHLISLSSSSIKVSW--VAPPAASRHGSIVRYSLAYQAVSGEDQERHEVKDIP 663
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
++ L GL+ T+Y V V A+ + G GPES RT P PP V + IN
Sbjct: 664 ADVSSYVL-EGLEKWTEYTVWVKAHTDVGPGPESGSTRIRTQEDVPGAPPRRVEVDNINS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG--NTLDADIVDLSPGK 177
T + V+W+ + I GY+V ++ R I+ V +A I L P
Sbjct: 723 TALRVSWKPPLQQKQHGHIRGYQVVYSRLENGEPRGQPIILDVALPEAQEAVISGLLPET 782
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMG 204
Y + V A++ GDG S + G
Sbjct: 783 TYSVTVAAYTTKGDGARSKAKVVTTTG 809
Score = 159 (61.0 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 54/196 (27%), Positives = 88/196 (44%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + S +TA+ + W P +E + G L+G+R++Y +E+ T + R T +
Sbjct: 815 PTMIISTTIGNTAL-IQWQPP---KEMV-GELMGYRLRYKREEEDIYTVRDF--RRTDDH 867
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
+ GL Y K+ A N AG G E + + T P P + + G+ TT +
Sbjct: 868 FTVTGLHKGATYIFKLCAKNRAGNGEEYSKEIS-TPEDVPSSYPQNLKVVGLTTTTTKLA 926
Query: 126 WRYVSPSFEEE--PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
W P E I+ Y V +++ ++ N T +T + I L P Y +RV
Sbjct: 927 WD--PPPLPERNGKIVRYVVVYRDINSHQNQTNGT----ADT-EMTIQGLKPDTTYDIRV 979
Query: 184 LAFSNGGDGRMSSPAI 199
AF+ G G +S P+I
Sbjct: 980 RAFTGKGGGPIS-PSI 994
Score = 155 (59.6 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 52/204 (25%), Positives = 91/204 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE---ETAVYY 57
+P P+ V NSTA+ V+W P +++ G + G+++ Y + +N E + +
Sbjct: 707 VPGAPPRRVEVDNINSTALRVSWKPP--LQQKQHGHIRGYQVVYSRLENGEPRGQPIILD 764
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
++ A+I GL P+T Y V V AY G+G S+ + T P KP + I
Sbjct: 765 VALPEAQEAVISGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMIISTT-I 823
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA-DIVDLSPG 176
T + + W+ P ++GY++R ++D+ D T D + L G
Sbjct: 824 GNTAL-IQWQ--PPKEMVGELMGYRLRYKREEEDIYTVRD----FRRTDDHFTVTGLHKG 876
Query: 177 KRYHMRVLAFSNGGDGRMSSPAIT 200
Y ++ A + G+G S I+
Sbjct: 877 ATYIFKLCAKNRAGNGEEYSKEIS 900
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 46/128 (35%), Positives = 62/128 (48%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +VMA NN G GP S RT +AP PP V + ++ TT+ V W
Sbjct: 377 IGGLSPYSEYEFRVMAVNNIGRGPPSGMVETRTSEQAPSSPPLRVQARMLSATTMLVQWE 436
Query: 128 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS---PGKRYHMRVL 184
P I GY+V D+ T NT D+ + +S P Y +RVL
Sbjct: 437 --PPEEPNGQIRGYRVYY---TSDLHFPLSTW-QKHNTEDSSLTTISGLVPDITYGLRVL 490
Query: 185 AFSNGGDG 192
AF++ GDG
Sbjct: 491 AFTSVGDG 498
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 53/199 (26%), Positives = 92/199 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN-PEETAVYYLSR 60
P P V +R ++T + V W P E N G++ G+R+ Y + + P T +
Sbjct: 414 PSSPPLRVQARMLSATTMLVQWEPPE--EPN--GQIRGYRVYYTSDLHFPLST---WQKH 466
Query: 61 TTRNWAL--IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
T + +L I GL PD Y ++V+A+ + G+GP S+ +T + P +P + +
Sbjct: 467 NTEDSSLTTISGLVPDITYGLRVLAFTSVGDGPPSDILQVKTQQGVPAQP-TGFEAEAEL 525
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
T + ++W + P ++ I Y++ WE D D ++ + P G+ I L P
Sbjct: 526 DTRIMLSWLW--PV--QDQITKYELTYWEADSD-NKHHVIFDPAGSYA---IDSLKPDTL 577
Query: 179 YHMRVLAFSNGGDGRMSSP 197
Y + A S G G + P
Sbjct: 578 YKFSLAARSEMGLGVYTQP 596
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/155 (25%), Positives = 67/155 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + G +T + W+P L N G+++ + + Y ++ N + +
Sbjct: 905 VPSSYPQNLKVVGLTTTTTKLAWDPPPLPERN--GKIVRYVVVY-RDINSHQNQT---NG 958
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T I GL+PDT Y ++V A+ G GP S RT + + +K + T
Sbjct: 959 TADTEMTIQGLKPDTTYDIRVRAFTGKGGGPISPSIQSRTMSTSMPEFTKNFGVKAVMKT 1018
Query: 121 TVHVTWRYVSPSFEEEPI-IGYKVRVWEVDQDMSR 154
+V +TW + P I Y + EV D+ R
Sbjct: 1019 SVLLTWEVPETYKSQVPFKILYNQQSVEVQGDLKR 1053
>ZFIN|ZDB-GENE-990415-10 [details] [associations]
symbol:nadl1.2 "neural adhesion molecule L1.2"
species:7955 "Danio rerio" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-990415-10
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 OMA:MDWNAPQ EMBL:CR354431
EMBL:BX664745 IPI:IPI00492940 ProteinModelPortal:E7FE93
Ensembl:ENSDART00000103731 ArrayExpress:E7FE93 Bgee:E7FE93
Uniprot:E7FE93
Length = 1273
Score = 172 (65.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 59/200 (29%), Positives = 93/200 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP-------EETA 54
P AP V NSTAI VTW + RE +RGRL G++I Y P E
Sbjct: 825 PLEAPLDVGLILINSTAIKVTWAAVN--RETVRGRLQGYKI-YLTYLGPKGQHLRREPKT 881
Query: 55 VYYLSRTTRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 113
+ ++ + ++G LQP + Y + V +N GEGP+SE L T P PPS++
Sbjct: 882 TFVVTTDSNEEKKVLGDLQPFSHYNLAVSVFNYKGEGPQSESILFFTPEGVPG-PPSSLM 940
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVD 172
+ + T + V W P+ +IGY ++ ++D D S ++ + + T +
Sbjct: 941 LDSPSETEMTVHW--TPPNQPNGNLIGYILQHQQLDNDASLMQ--VVKISDPTASHYKLK 996
Query: 173 LSPGKRYHMRVLAFSNGGDG 192
L P RY + ++ G+G
Sbjct: 997 LDPHSRYRFYLRGYTAIGEG 1016
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 47/206 (22%), Positives = 89/206 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+GV S + +TW E+ R + G +++ W++ + ++
Sbjct: 726 PDSNPEGVRSDSDEPGTLVITWK--EMDRRSFNGPDFHYKVM-WRKVLGSGPS-WHTKDI 781
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T ++ + + + +KV A N GEGPE + + + P + P V + IN T
Sbjct: 782 TSPPFVVTDVGNFSAFDIKVQAVNEMGEGPEPKSIIGYSGEDYPLEAPLDVGLILINSTA 841
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVD---QDMSRANDT--IIPVGNTLDADIV-DLSP 175
+ VTW V+ + GYK+ + + Q + R T ++ + + ++ DL P
Sbjct: 842 IKVTWAAVNRETVRGRLQGYKIYLTYLGPKGQHLRREPKTTFVVTTDSNEEKKVLGDLQP 901
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITF 201
Y++ V F+ G+G S + F
Sbjct: 902 FSHYNLAVSVFNYKGEGPQSESILFF 927
>UNIPROTKB|O60469 [details] [associations]
symbol:DSCAM "Down syndrome cell adhesion molecule"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IEA] [GO:0060060
"post-embryonic retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042327 "positive
regulation of phosphorylation" evidence=IDA] [GO:0007162 "negative
regulation of cell adhesion" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS;TAS] [GO:0030426 "growth cone" evidence=ISS]
[GO:0048842 "positive regulation of axon extension involved in axon
guidance" evidence=IDA] [GO:0070593 "dendrite self-avoidance"
evidence=ISS] [GO:0030424 "axon" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0005576
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 Pathway_Interaction_DB:hnf3apathway
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007626 GO:GO:0030426 GO:GO:0048813
Reactome:REACT_111155 GO:GO:0007162 eggNOG:NOG12793
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042327 GO:GO:0060060
EMBL:AF023450 EMBL:AF023449 EMBL:AF217525 EMBL:AL163283
EMBL:AL163282 EMBL:AL163281 IPI:IPI00029700 IPI:IPI00219339
RefSeq:NP_001258463.1 RefSeq:NP_001380.2 UniGene:Hs.397800
ProteinModelPortal:O60469 SMR:O60469 STRING:O60469
PhosphoSite:O60469 PaxDb:O60469 PRIDE:O60469
Ensembl:ENST00000400454 GeneID:1826 KEGG:hsa:1826 UCSC:uc002yyq.1
CTD:1826 GeneCards:GC21M041382 HGNC:HGNC:3039 MIM:602523
neXtProt:NX_O60469 PharmGKB:PA27491 HOVERGEN:HBG051409
InParanoid:O60469 KO:K06767 OMA:ECKNKSE OrthoDB:EOG4J9MXZ
ChiTaRS:DSCAM GenomeRNAi:1826 NextBio:7449 ArrayExpress:O60469
Bgee:O60469 CleanEx:HS_DSCAM Genevestigator:O60469
GermOnline:ENSG00000171587 GO:GO:0070593 GO:GO:0048842
Uniprot:O60469
Length = 2012
Score = 174 (66.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 60/218 (27%), Positives = 92/218 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLS 59
P PQ V +S +I VTW + +N IRG IG+R +Y N + + +
Sbjct: 984 PDGPPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYR-EYSTGGNFQFNIISVDT 1042
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L T+Y + V A N AG GP S+ + T P PP V +P
Sbjct: 1043 SGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSP 1102
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
++ ++W +S + G++V W +D ++ + I +L+ D L
Sbjct: 1103 ESISISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKN-ITTTQPSLELD--GLEKYT 1159
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLAF+ GDG S T KE G PA
Sbjct: 1160 NYSIQVLAFTRAGDGVRSEQIFT----RTKEDVPGPPA 1193
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 55/206 (26%), Positives = 94/206 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P+ V + + +I+++W+ + +E + G L G R+ YW E
Sbjct: 1087 VPSYPPENVQAIATSPESISISWSTLS--KEALNGILQGFRVIYWANLMDGELGEIKNIT 1144
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT+ + GL+ T Y ++V+A+ AG+G SE+ RT P PP+ V + +
Sbjct: 1145 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPG-PPAGVKAAAASAS 1203
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV----GNTLDADIVDLSPG 176
V V+W P + II K V+ S T+I ++ I +LS
Sbjct: 1204 MVFVSWL---PPLKLNGIIR-KYTVF-----CSHPYPTVISEFEASPDSFSYRIPNLSRN 1254
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQ 202
++Y + V+A ++ G G SS IT +
Sbjct: 1255 RQYSVWVVAVTSAGRGN-SSEIITVE 1279
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 36/140 (25%), Positives = 61/140 (43%)
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
N A I+ + P + Y +++ A N G+ S AP PP VH++ I+ ++
Sbjct: 943 NSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELTITADEAAPDGPPQEVHLEPISSQSIR 1002
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV---DLSPGKRYH 180
VTW+ + I GY++ E II V + D+++ +L+ +Y
Sbjct: 1003 VTWKAPKKHLQNGIIRGYQIGYREYSTG-GNFQFNIISVDTSGDSEVYTLDNLNKFTQYG 1061
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+ V A + G G S IT
Sbjct: 1062 LVVQACNRAGTGPSSQEIIT 1081
>UNIPROTKB|Q589G5 [details] [associations]
symbol:PRTG "Protogenin" species:9031 "Gallus gallus"
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 HSSP:Q92859 eggNOG:NOG316920
HOGENOM:HOG000113009 HOVERGEN:HBG101283 EMBL:AB185923
IPI:IPI00601335 RefSeq:NP_001025719.1 UniGene:Gga.29783
ProteinModelPortal:Q589G5 GeneID:415407 KEGG:gga:415407 CTD:283659
InParanoid:Q589G5 OrthoDB:EOG4J3WG5 NextBio:20819021
ArrayExpress:Q589G5 Uniprot:Q589G5
Length = 1187
Score = 171 (65.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 58/205 (28%), Positives = 104/205 (50%)
Query: 1 MPQVAPQ-GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP+ + SR + T I ++W PI + RG+++ +R+ + + + V L
Sbjct: 508 VPLRAPEISLTSR--SPTDILISWLPIPA--KYRRGQVVLYRLSF-RLSTDSKIQVLELP 562
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES----ERYLERTYRKAPQKPPSAVHIK 115
T+ + L+ GL+PD+ Y V++ A G G S R + T KAP+ P + ++
Sbjct: 563 GTSDEY-LLEGLRPDSVYLVRITAATRIGWGEASLWTSHRTPKATSVKAPKSPE--LRLE 619
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
IN TT+ V W+ S + I GYK+ E Q + N I+ + L+ + L P
Sbjct: 620 PINCTTITVQWQ--QDSDDTAAIQGYKLYYKEEGQ---QENGPILLDASDLEYTVSGLDP 674
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAIT 200
++YH+R+LA++N +G + ++
Sbjct: 675 RRKYHVRLLAYNNMEEGYQADQTVS 699
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 44/194 (22%), Positives = 87/194 (44%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED--NPEETAVYYLSRTT 62
AP V + +S+AI + W L + ++I + + Y K + N EE V + TT
Sbjct: 413 APYNVHAETMSSSAILLAWER-PLYNSD---KVIAYSVHYMKAEGLNNEEYQVVIGNDTT 468
Query: 63 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 122
+I L+P + Y ++AY G S+ + T P + P + + +PT +
Sbjct: 469 HY--IIDDLEPASNYTFYIVAYMPLGASQMSDHVTQHTLEDVPLRAPE-ISLTSRSPTDI 525
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHM 181
++W + + ++ Y++ + + D S+ ++ + T D +++ L P Y +
Sbjct: 526 LISWLPIPAKYRRGQVVLYRLS-FRLSTD-SKIQ--VLELPGTSDEYLLEGLRPDSVYLV 581
Query: 182 RVLAFSNGGDGRMS 195
R+ A + G G S
Sbjct: 582 RITAATRIGWGEAS 595
>RGD|3209 [details] [associations]
symbol:Nrcam "neuronal cell adhesion molecule" species:10116
"Rattus norvegicus" [GO:0001525 "angiogenesis" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO;TAS] [GO:0007155 "cell
adhesion" evidence=TAS] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007417 "central nervous system development" evidence=ISO]
[GO:0008104 "protein localization" evidence=ISO] [GO:0010975
"regulation of neuron projection development" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=ISO] [GO:0019227 "neuronal action
potential propagation" evidence=ISO] [GO:0030424 "axon" evidence=ISO]
[GO:0030506 "ankyrin binding" evidence=ISO;ISS;TAS] [GO:0031290
"retinal ganglion cell axon guidance" evidence=ISO] [GO:0043194 "axon
initial segment" evidence=IDA] [GO:0045162 "clustering of
voltage-gated sodium channels" evidence=ISO;ISS] [GO:0045202
"synapse" evidence=ISO] [GO:0086080 "protein binding involved in
heterotypic cell-cell adhesion" evidence=ISO] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:3209 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003006 PROSITE:PS00290 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 Reactome:REACT_96538 GO:GO:0045162 InterPro:IPR013098
Pfam:PF07679 GO:GO:0043194 GO:GO:0030506 HOGENOM:HOG000231380
HOVERGEN:HBG000144 InterPro:IPR026966 Pfam:PF13882 eggNOG:NOG293951
EMBL:U81037 IPI:IPI00395311 IPI:IPI00561533 IPI:IPI00569248
UniGene:Rn.10691 ProteinModelPortal:P97686 SMR:P97686 STRING:P97686
PhosphoSite:P97686 PRIDE:P97686 UCSC:RGD:3209 ArrayExpress:P97686
Genevestigator:P97686 GermOnline:ENSRNOG00000004067 Uniprot:P97686
Length = 1214
Score = 171 (65.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 57/210 (27%), Positives = 97/210 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P VAP V NST W+P+ +++RG L G+RI YWK + + ++ +
Sbjct: 844 LPMVAPGNVRVSVVNSTLAEAHWDPVP--PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEK 901
Query: 61 T------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH- 113
++ ++ GLQP + Y + V N GEGP S +R + P+ PSA
Sbjct: 902 KILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGPASA---DRGFH-TPEGVPSAPSS 957
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIV 171
+K +NPT +T + PS + Y ++ ++ ++ D IP T +
Sbjct: 958 LKIVNPTLDSLTLEWDPPSHPNGILTEYILKYQPINSTHELGPLVDLKIPANKTRWT-LK 1016
Query: 172 DLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 200
+L+ RY A ++ G G +++ AIT
Sbjct: 1017 NLNFSTRYKFYFYAQTSVGSGSQITEEAIT 1046
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 43/201 (21%), Positives = 78/201 (38%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P V G + +TW P+ + N G + +++ + ++D +E ++
Sbjct: 746 PDQNPTAVEGLGTEPDNLVITWKPLNGFQSNGPG--LQYKVSWRQKDGDDEWTSVVVANV 803
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
++ ++ G Y +KV A N+ G PE + + P P V + +N T
Sbjct: 804 SKY--IVSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTL 861
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSP 175
W V P + GY++ W+ Q S+ N I G+ + L P
Sbjct: 862 AEAHWDPVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQP 920
Query: 176 GKRYHMRVLAFSNGGDGRMSS 196
Y + V + G+G S+
Sbjct: 921 YSHYVLNVRVVNGKGEGPASA 941
>UNIPROTKB|F1MKB9 [details] [associations]
symbol:DSCAM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070593 "dendrite self-avoidance" evidence=IEA]
[GO:0060060 "post-embryonic retina morphogenesis in camera-type
eye" evidence=IEA] [GO:0048842 "positive regulation of axon
extension involved in axon guidance" evidence=IEA] [GO:0048813
"dendrite morphogenesis" evidence=IEA] [GO:0042327 "positive
regulation of phosphorylation" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007626 GO:GO:0030426 GO:GO:0048813
GO:GO:0007162 InterPro:IPR013098 Pfam:PF07679 GO:GO:0042327
GO:GO:0060060 OMA:ECKNKSE GO:GO:0070593 GO:GO:0048842
GeneTree:ENSGT00690000101869 EMBL:DAAA02003210 EMBL:DAAA02003211
EMBL:DAAA02003212 EMBL:DAAA02003213 EMBL:DAAA02003214
EMBL:DAAA02003215 EMBL:DAAA02003216 IPI:IPI01003824
Ensembl:ENSBTAT00000006240 Uniprot:F1MKB9
Length = 1859
Score = 173 (66.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 59/218 (27%), Positives = 92/218 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLS 59
P PQ V +S +I VTW + +N IRG IG+R +Y N + + +
Sbjct: 829 PDGPPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYR-EYSTGGNFQFNIISIDT 887
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L T+Y + V A N AG GP S+ + T P PP V +P
Sbjct: 888 TGDSEIYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSP 947
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
++ ++W +S + G++V W +D ++ + + +L+ D L
Sbjct: 948 ESISISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKN-VTTTQPSLELD--GLEKYT 1004
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLAF+ GDG S T KE G PA
Sbjct: 1005 NYSIQVLAFTRAGDGVRSEQIFT----RTKEDVPGPPA 1038
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/206 (26%), Positives = 94/206 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P+ V + + +I+++W+ + +E + G L G R+ YW E
Sbjct: 932 VPSYPPENVQAIATSPESISISWSTLS--KEALNGILQGFRVIYWANLMDGELGEIKNVT 989
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT+ + GL+ T Y ++V+A+ AG+G SE+ RT P PP+ V + +
Sbjct: 990 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPG-PPAGVKAAAASAS 1048
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV----GNTLDADIVDLSPG 176
V V+W P + II K V+ S T+I ++ I +LS
Sbjct: 1049 MVFVSWL---PPLKLNGIIR-KYTVF-----CSHPYPTVISEFEASPDSFSYRIPNLSRN 1099
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQ 202
++Y + V+A ++ G G SS IT +
Sbjct: 1100 RQYSVWVVAVTSAGRGN-SSEIITVE 1124
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 37/140 (26%), Positives = 61/140 (43%)
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
N A I+ + P + Y +++ A N G+ S AP PP VH++ I+ ++
Sbjct: 788 NSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELSITADEAAPDGPPQEVHLEPISSQSIR 847
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV---DLSPGKRYH 180
VTW+ + I GY++ E II + T D++I +L+ +Y
Sbjct: 848 VTWKAPKKHLQNGIIRGYQIGYREYSTG-GNFQFNIISIDTTGDSEIYTLDNLNKFTQYG 906
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+ V A + G G S IT
Sbjct: 907 LVVQACNRAGTGPSSQEIIT 926
>UNIPROTKB|F1NY98 [details] [associations]
symbol:DSCAM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0042327
"positive regulation of phosphorylation" evidence=IEA] [GO:0048813
"dendrite morphogenesis" evidence=IEA] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=IEA] [GO:0060060 "post-embryonic retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0070593 "dendrite
self-avoidance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0030426 GO:GO:0007162 InterPro:IPR013098
Pfam:PF07679 GO:GO:0042327 OMA:ECKNKSE GeneTree:ENSGT00690000101869
EMBL:AADN02010831 EMBL:AADN02010832 EMBL:AADN02010833
EMBL:AADN02010834 EMBL:AADN02010835 EMBL:AADN02010836
EMBL:AADN02010837 IPI:IPI00598254 Ensembl:ENSGALT00000025993
Uniprot:F1NY98
Length = 1994
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 59/218 (27%), Positives = 93/218 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLS 59
P PQ V +S +I VTW + +N IRG IG+R +Y N + + +
Sbjct: 970 PDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYR-EYSAGGNFQFNIISIDT 1028
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L+ T+Y + V A N AG GP S+ + T P PP V +P
Sbjct: 1029 TGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEIITTTLEDVPSCPPGNVQATATSP 1088
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
T+ ++W ++ + G++V W +D ++ + + +L+ D L
Sbjct: 1089 ETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEIRN-VTTTQPSLELD--GLEKYT 1145
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLAF+ GDG S T KE G PA
Sbjct: 1146 NYSIQVLAFTRAGDGVRSEQIFT----RTKEDVPGPPA 1179
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 57/206 (27%), Positives = 92/206 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P V + + I+++W+ L +E + G L G R+ YW E
Sbjct: 1073 VPSCPPGNVQATATSPETISISWST--LAKETLNGILQGFRVIYWANLLDGELGEIRNVT 1130
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT+ + GL+ T Y ++V+A+ AG+G SE+ RT P PP+ V + +
Sbjct: 1131 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPG-PPAGVKAAASSAS 1189
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV----GNTLDADIVDLSPG 176
TV V+W P + II K V+ S T+I ++ I +LS
Sbjct: 1190 TVFVSWL---PPLKLNGIIR-KYTVF-----CSHPYPTVISEFEASPDSFSYRIPNLSRN 1240
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQ 202
++Y + V+A + G G SS IT +
Sbjct: 1241 RQYSVWVVAVTAAGRGN-SSEIITVE 1265
Score = 133 (51.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 39/140 (27%), Positives = 61/140 (43%)
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
N A I+ L P + Y +++ A N G+ S T AP PP V ++ I+ ++
Sbjct: 929 NQATIIDLHPSSTYNIRMYAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIR 988
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR---YH 180
VTW+ + I GY++ E II + T D+++ L+ K+ Y
Sbjct: 989 VTWKAPKKHLQNGIIRGYQIGYREYSAG-GNFQFNIISIDTTGDSEVYTLNNLKKFTQYG 1047
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
M V A + G G S IT
Sbjct: 1048 MVVQACNRAGIGPSSQEIIT 1067
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 20 NVTWNPIELIRENIRGRLI 38
N+ W P R+ + G LI
Sbjct: 248 NIPWEPDSRFRQTVTGLLI 266
>MGI|MGI:1196281 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IMP] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IDA] [GO:0030426 "growth cone" evidence=IDA] [GO:0042327
"positive regulation of phosphorylation" evidence=ISO] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=ISO;IDA] [GO:0060060 "post-embryonic retina morphogenesis
in camera-type eye" evidence=IMP] [GO:0070593 "dendrite
self-avoidance" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1196281 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0007626 GO:GO:0030426 GO:GO:0048813 GO:GO:0007162
eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679 GO:GO:0042327
EMBL:CH466602 GO:GO:0060060 Reactome:REACT_137402 CTD:1826
HOVERGEN:HBG051409 KO:K06767 OMA:ECKNKSE ChiTaRS:DSCAM
GO:GO:0070593 GO:GO:0048842 EMBL:AY005483 EMBL:AF315558
IPI:IPI00112204 RefSeq:NP_112451.1 UniGene:Mm.328737 HSSP:O88792
ProteinModelPortal:Q9ERC8 SMR:Q9ERC8 IntAct:Q9ERC8 STRING:Q9ERC8
PhosphoSite:Q9ERC8 PRIDE:Q9ERC8 Ensembl:ENSMUST00000056102
GeneID:13508 KEGG:mmu:13508 UCSC:uc008add.1
GeneTree:ENSGT00690000101869 HOGENOM:HOG000112277 InParanoid:Q9ERC8
NextBio:284054 Bgee:Q9ERC8 Genevestigator:Q9ERC8 Uniprot:Q9ERC8
Length = 2013
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 59/218 (27%), Positives = 92/218 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLS 59
P PQ V +S +I VTW + +N IRG IG+R +Y N + + +
Sbjct: 984 PDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYR-EYSTGGNFQFNIISIDT 1042
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L T+Y + V A N AG GP S+ + T P PP V +P
Sbjct: 1043 TGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSP 1102
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
++ ++W +S + G++V W +D ++ + + +L+ D L
Sbjct: 1103 ESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEIKN-VTTTQPSLELD--GLEKYT 1159
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLAF+ GDG S T KE G PA
Sbjct: 1160 NYSIQVLAFTRAGDGVRSEQIFT----RTKEDVPGPPA 1193
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 55/206 (26%), Positives = 94/206 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P+ V + + +I+++W+ + +E + G L G R+ YW E
Sbjct: 1087 VPSYPPENVQAIATSPESISISWSTLS--KEALNGILQGFRVIYWANLIDGELGEIKNVT 1144
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT+ + GL+ T Y ++V+A+ AG+G SE+ RT P PP+ V + +
Sbjct: 1145 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPG-PPAGVKAAAASAS 1203
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV----GNTLDADIVDLSPG 176
V V+W P + II K V+ S T+I ++ I +LS
Sbjct: 1204 MVFVSWL---PPLKLNGIIR-KYTVF-----CSHPYPTVISEFEASPDSFSYRIPNLSRN 1254
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQ 202
++Y + V+A ++ G G SS IT +
Sbjct: 1255 RQYSVWVVAVTSAGRGN-SSEIITVE 1279
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 35/140 (25%), Positives = 60/140 (42%)
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
N A I+ + P + Y +++ A N G+ S AP PP VH++ + ++
Sbjct: 943 NSATIIDIHPSSTYSIRMYAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIR 1002
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV---DLSPGKRYH 180
VTW+ + I GY++ E II + T D+++ +L+ +Y
Sbjct: 1003 VTWKAPKKHLQNGIIRGYQIGYREYSTG-GNFQFNIISIDTTGDSEVYTLDNLNKFTQYG 1061
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+ V A + G G S IT
Sbjct: 1062 LVVQACNRAGTGPSSQEIIT 1081
>RGD|619992 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=ISO;ISS]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=ISO;ISS] [GO:0007626
"locomotory behavior" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030424 "axon" evidence=ISO;ISS]
[GO:0030426 "growth cone" evidence=ISO;ISS] [GO:0042327 "positive
regulation of phosphorylation" evidence=ISO;ISS] [GO:0048813
"dendrite morphogenesis" evidence=ISO] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=ISO;IMP] [GO:0060060 "post-embryonic retina morphogenesis
in camera-type eye" evidence=ISO] [GO:0070593 "dendrite
self-avoidance" evidence=ISO;ISS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:619992 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007626 GO:GO:0030426 GO:GO:0048813
GO:GO:0007162 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
GO:GO:0042327 GO:GO:0060060 CTD:1826 HOVERGEN:HBG051409 KO:K06767
OrthoDB:EOG4J9MXZ GO:GO:0070593 GO:GO:0048842 HSSP:O88792
HOGENOM:HOG000112277 EMBL:AF334385 IPI:IPI00207531
RefSeq:NP_598271.1 UniGene:Rn.24399 ProteinModelPortal:Q8VHZ8
SMR:Q8VHZ8 IntAct:Q8VHZ8 STRING:Q8VHZ8 GeneID:171119
KEGG:rno:171119 InParanoid:Q8VHZ8 NextBio:621852
ArrayExpress:Q8VHZ8 Genevestigator:Q8VHZ8 Uniprot:Q8VHZ8
Length = 2013
Score = 173 (66.0 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 59/218 (27%), Positives = 92/218 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLS 59
P PQ V +S +I VTW + +N IRG IG+R +Y N + + +
Sbjct: 984 PDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYR-EYSTGGNFQFNIISIDT 1042
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ L T+Y + V A N AG GP S+ + T P PP V +P
Sbjct: 1043 TGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSP 1102
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
++ ++W +S + G++V W +D ++ + + +L+ D L
Sbjct: 1103 ESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEIKN-VTTTQPSLELD--GLEKYT 1159
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLAF+ GDG S T KE G PA
Sbjct: 1160 NYSIQVLAFTRAGDGVRSEQIFT----RTKEDVPGPPA 1193
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 55/206 (26%), Positives = 94/206 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P+ V + + +I+++W+ + +E + G L G R+ YW E
Sbjct: 1087 VPSYPPENVQAIATSPESISISWSTLS--KEALNGILQGFRVIYWANLIDGELGEIKNVT 1144
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT+ + GL+ T Y ++V+A+ AG+G SE+ RT P PP+ V + +
Sbjct: 1145 TTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPG-PPAGVKAAAASAS 1203
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV----GNTLDADIVDLSPG 176
V V+W P + II K V+ S T+I ++ I +LS
Sbjct: 1204 MVFVSWL---PPLKLNGIIR-KYTVF-----CSHPYPTVISEFEASPDSFSYRIPNLSRN 1254
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQ 202
++Y + V+A ++ G G SS IT +
Sbjct: 1255 RQYSVWVVAVTSAGRGN-SSEIITVE 1279
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 35/140 (25%), Positives = 60/140 (42%)
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
N A I+ + P + Y +++ A N G+ S AP PP VH++ + ++
Sbjct: 943 NSATIIDIHPSSTYSIRMYAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIR 1002
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV---DLSPGKRYH 180
VTW+ + I GY++ E II + T D+++ +L+ +Y
Sbjct: 1003 VTWKAPKKHLQNGIIRGYQIGYREYSTG-GNFQFNIISIDTTGDSEVYTLDNLNKFTQYG 1061
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+ V A + G G S IT
Sbjct: 1062 LVVQACNRAGTGPSSQEIIT 1081
>UNIPROTKB|I3LUE2 [details] [associations]
symbol:PTPRS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00590000082937 EMBL:FP340368
Ensembl:ENSSSCT00000032503 Uniprot:I3LUE2
Length = 1187
Score = 169 (64.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 50/193 (25%), Positives = 90/193 (46%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQP 73
+ T+I ++W+P +E+I I + + Y + D+ E + T A +V L+P
Sbjct: 9 SETSIGLSWSPPR--QESI----IKYELLYREGDHGREVGRTFDPAT----AFVVDDLKP 58
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 133
+T+Y ++ A + G G + +RT + P PP V + +N T + V WR +P
Sbjct: 59 NTEYAFRLAARSPQGLGAFTSVVRQRTLQSMPSAPPRKVEAEALNATAIRVLWRSPAPGR 118
Query: 134 EEEPIIGYKVRVWEVDQDMSRANDTI--IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ I GY+V ++ +R I + + + + I +L P Y + V A++ GD
Sbjct: 119 QHGQIRGYQVHYVRMEGAEARGPPRIKDVMLADAQEMIITNLQPETAYSITVAAYTMKGD 178
Query: 192 GRMSSPAITFQMG 204
G S P + G
Sbjct: 179 GARSKPKVVVTKG 191
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 46/203 (22%), Positives = 87/203 (42%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA---VYY 57
MP P+ V + N+TAI V W R++ G++ G+++ Y + + E +
Sbjct: 89 MPSAPPRKVEAEALNATAIRVLWRSPAPGRQH--GQIRGYQVHYVRMEGAEARGPPRIKD 146
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ +I LQP+T Y + V AY G+G S+ + T +P + ++
Sbjct: 147 VMLADAQEMIITNLQPETAYSITVAAYTMKGDGARSKPKVVVTKGAVLGRP--TLSVQQT 204
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
++ W + + E++ ++GY+++ D A P + A V G
Sbjct: 205 PEGSLLARWEPPAGTAEDQ-VLGYRLQFGREDSS-PLATLEFPPTEDHYTASGVH--KGA 260
Query: 178 RYHMRVLAFSNGGDGRMSSPAIT 200
Y R+ A S GG G ++ ++
Sbjct: 261 TYVFRLAARSRGGLGEEAAEVLS 283
>UNIPROTKB|Q2VWP7 [details] [associations]
symbol:PRTG "Protogenin" species:9606 "Homo sapiens"
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 eggNOG:NOG316920
HOGENOM:HOG000113009 HOVERGEN:HBG101283 CTD:283659
OrthoDB:EOG4J3WG5 EMBL:AY630258 EMBL:AK098622 IPI:IPI00658004
RefSeq:NP_776175.2 UniGene:Hs.130957 HSSP:P23468
ProteinModelPortal:Q2VWP7 SMR:Q2VWP7 STRING:Q2VWP7
PhosphoSite:Q2VWP7 DMDM:121946850 PaxDb:Q2VWP7 PRIDE:Q2VWP7
DNASU:283659 Ensembl:ENST00000389286 GeneID:283659 KEGG:hsa:283659
UCSC:uc002adg.3 GeneCards:GC15M055903 HGNC:HGNC:26373 HPA:HPA032138
MIM:613261 neXtProt:NX_Q2VWP7 PharmGKB:PA142671124
InParanoid:Q2VWP7 OMA:QGYKLYY GenomeRNAi:283659 NextBio:94142
Bgee:Q2VWP7 CleanEx:HS_PRTG Genevestigator:Q2VWP7 Uniprot:Q2VWP7
Length = 1150
Score = 168 (64.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 53/187 (28%), Positives = 90/187 (48%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
T I ++W PI + RG+++ +R+ + + V L TT + L+ GL+PD+
Sbjct: 531 TDILISWLPIPA--KYRRGQVVLYRLSF-RLSTENSIQVLELPGTTHEY-LLEGLKPDSV 586
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA--VHIKGINPTTVHVTWRYVSPSFE 134
Y V++ A G G S RT + K P + +H++ +N TT+ V W+ E
Sbjct: 587 YLVRITAATRVGLGESSVWTSHRTPKATSVKAPKSPELHLEPLNCTTISVRWQQ---DVE 643
Query: 135 EEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 193
+ I GYK+ E Q + N I L + L P ++YH+R+LA++N DG
Sbjct: 644 DTAAIQGYKLYYKEEGQ---QENGPIFLDTKDLLYTLSGLDPRRKYHVRLLAYNNIDDGY 700
Query: 194 MSSPAIT 200
+ ++
Sbjct: 701 QADQTVS 707
Score = 132 (51.5 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
N T I+V W + + + + G+++ Y+KE+ +E +L + L GL P
Sbjct: 630 NCTTISVRWQ--QDVEDT--AAIQGYKL-YYKEEGQQENGPIFLDTKDLLYTLS-GLDPR 683
Query: 75 TKYYVKVMAYNNAGEGPESERYLE-------RTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
KY+V+++AYNN +G ++++ + R P PP ++ K +++ + WR
Sbjct: 684 RKYHVRLLAYNNIDDGYQADQTVSTPGCVSVRDRMVPPPPPPHHLYAKANTSSSIFLHWR 743
Query: 128 YVSPSFEEEPIIGYKVR 144
P+F II Y +R
Sbjct: 744 --RPAFTAAQIINYTIR 758
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 44/193 (22%), Positives = 85/193 (44%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED--NPEETAVYYLSRTT 62
AP V + +S+AI + W L + ++I + + Y K + N EE V + TT
Sbjct: 421 APYNVHAETMSSSAILLAWER-PLYNSD---KVIAYSVHYMKAEGLNNEEYQVVIGNDTT 476
Query: 63 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 122
+I L+P + Y ++AY G S+ + T P +PP + + +PT +
Sbjct: 477 HY--IIDDLEPASNYTFYIVAYMPMGASQMSDHVTQNTLEDVPLRPPE-ISLTSRSPTDI 533
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 182
++W + + ++ Y++ ++ + + +P G T + + L P Y +R
Sbjct: 534 LISWLPIPAKYRRGQVVLYRLSFRLSTENSIQVLE--LP-GTTHEYLLEGLKPDSVYLVR 590
Query: 183 VLAFSNGGDGRMS 195
+ A + G G S
Sbjct: 591 ITAATRVGLGESS 603
>UNIPROTKB|F1SFM3 [details] [associations]
symbol:CHL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050890 "cognition" evidence=IEA] [GO:0045177 "apical
part of cell" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0002020 "protease
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0007411 GO:GO:0001764
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0050890 GO:GO:0030425
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0045177 GO:GO:0008344 InterPro:IPR013098
Pfam:PF07679 OMA:WEAGDDH InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 EMBL:CU929825 EMBL:FP236294
Ensembl:ENSSSCT00000012612 ArrayExpress:F1SFM3 Uniprot:F1SFM3
Length = 1210
Score = 168 (64.2 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 53/203 (26%), Positives = 97/203 (47%)
Query: 2 PQVAP--QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK-------EDNPEE 52
P AP GV NST + VTW+ I +E + G L G+++ +WK +P+E
Sbjct: 810 PDTAPVIHGVDV--INSTLVKVTWSTIP--KERVHGHLKGYQVNWWKTKSLLDGRTHPKE 865
Query: 53 TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV 112
V S RN+ ++ L +++++ V+A+N+ G GPESE Y+ T P++P
Sbjct: 866 VNVLRFSGQ-RNYGMVPSLDAFSEFHLTVLAFNSKGAGPESEPYVFHTPEGVPEQPTFLK 924
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADI 170
IK ++ T ++W P + GY ++ ++ ++ ND I + +
Sbjct: 925 VIK-VDKDTATLSWGL--PKKLNGNLTGYLLQYQIINDTYEIGELNDINITTLSKPSWRL 981
Query: 171 VDLSPGKRYHMRVLAFSNGGDGR 193
+L+ +Y + A ++ G G+
Sbjct: 982 SNLNATTKYKFYLRACTSKGCGK 1004
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/206 (24%), Positives = 86/206 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ + + + + W P++ + +N G + +R+ WK P+ V + T
Sbjct: 712 PDKNPQNIRVQASQPKEMIIKWEPLKPMEQNGPG--LEYRVT-WK---PQGALVEWEEET 765
Query: 62 TRNWALIVGLQPDT--KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH-IKGIN 118
N L V + P Y V+V A N+ G P+ + + + P P +H + IN
Sbjct: 766 VTNHTLRV-MTPAVYAPYDVQVQAINHLGSAPDPQSVVLYSGEDYPDTAP-VIHGVDVIN 823
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS-RANDTIIPV----GNTLDADIVDL 173
T V VTW + + GY+V W+ + R + + V G + L
Sbjct: 824 STLVKVTWSTIPKERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNVLRFSGQRNYGMVPSL 883
Query: 174 SPGKRYHMRVLAFSNGGDGRMSSPAI 199
+H+ VLAF++ G G S P +
Sbjct: 884 DAFSEFHLTVLAFNSKGAGPESEPYV 909
>ZFIN|ZDB-GENE-060503-530 [details] [associations]
symbol:ptprfb "protein tyrosine phosphatase,
receptor type, f, b" species:7955 "Danio rerio" [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0016791 "phosphatase
activity" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194
ZFIN:ZDB-GENE-060503-530 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0008201 GO:GO:0007155
GO:GO:0004725 GO:GO:0035335 InterPro:IPR013098 Pfam:PF07679
eggNOG:COG5599 HOGENOM:HOG000010250 KO:K05695
GeneTree:ENSGT00590000082937 OrthoDB:EOG4BG8V3 OMA:FTPTIEA
EMBL:BX663493 EMBL:BX248089 EMBL:BC134804 IPI:IPI00801212
RefSeq:NP_001077045.1 UniGene:Dr.12854 ProteinModelPortal:A4IFW2
SMR:A4IFW2 PRIDE:A4IFW2 Ensembl:ENSDART00000083314 GeneID:799867
KEGG:dre:799867 CTD:799867 InParanoid:A4IFW2 NextBio:20934001
ArrayExpress:A4IFW2 Bgee:A4IFW2 Uniprot:A4IFW2
Length = 1909
Score = 170 (64.9 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 54/216 (25%), Positives = 92/216 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR- 60
P PQ V +ST+I V+W + + G ++ + + Y + N E+T + +
Sbjct: 606 PSAPPQDVHLLSLSSTSIKVSW--VAPPAASRHGAIVRYTVSY-QAVNGEDTERHEVPDI 662
Query: 61 -TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ ++ GL+ T+Y V V A+ + G GPES RT P PP + ++ +N
Sbjct: 663 GADASSCVLEGLEKWTEYQVWVRAHTDVGPGPESTAVRIRTNEDVPGAPPRKLEVEALNS 722
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-----------NTLDA 168
T + VTW+ + I GY+V ++ R + I+ V +A
Sbjct: 723 TAIRVTWKPPLSGKQHGQIRGYQVIYSRLENGEPRGHPNIMDVALPEAQWKIEESTEYEA 782
Query: 169 DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 204
I L+ Y + V A++ GDG S + G
Sbjct: 783 VIAGLASETSYSVTVAAYTTKGDGARSKAKVVTTTG 818
Score = 157 (60.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 58/180 (32%), Positives = 85/180 (47%)
Query: 16 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
+T++ +TW+ E + +I +R K + E V TTR I GL P +
Sbjct: 333 ATSVTLTWDSGN--PEPVSYYIIQYRAKTSDTNFQEVDGV----ATTRY--SIGGLSPYS 384
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y +VMA NN G GP SE RT +AP PP V + ++ +T+ V W P
Sbjct: 385 EYEFRVMAVNNIGRGPPSEPVETRTGEQAPSSPPLHVQARMLSASTMLVQWE--PPEEPN 442
Query: 136 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA---DIVDLSPGKRYHMRVLAFSNGGDG 192
I GY++ + D D A + NT D+ I L+ G Y +RVL F++ GDG
Sbjct: 443 GQIRGYRI-YYTSDLD---APLSAWQKHNTDDSRLTTISSLTTGITYSLRVLGFTSVGDG 498
Score = 152 (58.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 52/197 (26%), Positives = 91/197 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSR 60
P P V +R +++ + V W P E N G++ G+RI Y + D P + +
Sbjct: 414 PSSPPLHVQARMLSASTMLVQWEPPE--EPN--GQIRGYRIYYTSDLDAPLSAWQKHNTD 469
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+R I L Y ++V+ + + G+GP S+ +T + P +P S+ + T
Sbjct: 470 DSR-LTTISSLTTGITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQP-SSFEAEAELDT 527
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
+ +TW + P ++PII Y+++ WE D D ++ + T P G+ + L P Y
Sbjct: 528 RILLTWLW--PV--QDPIIKYELQYWEADSD-NKIHVTFDPAGSYA---VEGLKPDTLYK 579
Query: 181 MRVLAFSNGGDGRMSSP 197
+ A S G G + P
Sbjct: 580 FSLAARSEMGQGVFTHP 596
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P + G ++ +TW P L N GR+I H I +++ N ++ + +R
Sbjct: 914 VPSGFPLNLQVVGLTTSTTRLTWEPPALSERN--GRII-HYIVVYRDINSKQNST---NR 967
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T+ I GL+PDT Y ++V A+ + G GP S RT +P S +K + T
Sbjct: 968 TSDTQMTIQGLRPDTTYDIRVQAFTSKGGGPISPSIQSRTMSTSPAFATS-FGVKAVMKT 1026
Query: 121 TVHVTWRYVSPSFEEE-PI-IGYKVRVWEVDQDMSR 154
+V +TW V +++ + P I Y + EV ++ R
Sbjct: 1027 SVLLTWE-VPENYKSQVPFKILYNQQSVEVQGNLKR 1061
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/175 (22%), Positives = 85/175 (48%)
Query: 33 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 92
++ +I + ++YW+ D+ + V + ++A + GL+PDT Y + A + G+G
Sbjct: 537 VQDPIIKYELQYWEADSDNKIHVTF--DPAGSYA-VEGLKPDTLYKFSLAARSEMGQGVF 593
Query: 93 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 152
+ RT + AP PP VH+ ++ T++ V+W + I+ Y V V+ +
Sbjct: 594 THPIEARTAQSAPSAPPQDVHLLSLSSTSIKVSWVAPPAASRHGAIVRYTVSYQAVNGED 653
Query: 153 SRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 206
+ ++ + +G + +++ L Y + V A ++ G G S+ A+ + E+
Sbjct: 654 TERHE-VPDIGADASSCVLEGLEKWTEYQVWVRAHTDVGPGPEST-AVRIRTNED 706
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 58/227 (25%), Positives = 95/227 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET------- 53
+P P+ + NSTAI VTW P +++ G++ G+++ Y + +N E
Sbjct: 707 VPGAPPRKLEVEALNSTAIRVTWKPPLSGKQH--GQIRGYQVIYSRLENGEPRGHPNIMD 764
Query: 54 -----AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP 108
A + + +T A+I GL +T Y V V AY G+G S+ + T P KP
Sbjct: 765 VALPEAQWKIEESTEYEAVIAGLASETSYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKP 824
Query: 109 PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA 168
+ N T + W+ P ++GY++R ++++ N I T D
Sbjct: 825 TMIISTTVGN--TALIQWQ--PPKDMVGELMGYRLRYKRLEEE----NYEIREFSRTDDH 876
Query: 169 DIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
V DL G Y + A + G G +G ++ SG P
Sbjct: 877 HTVTDLHKGATYSFHLSARNRAGLGE----EYVKDIGTPEDVPSGFP 919
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 51/194 (26%), Positives = 84/194 (43%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P + S +TA+ + W P +++ G L+G+R++Y K E + SRT +
Sbjct: 824 PTMIISTTVGNTAL-IQWQP----PKDMVGELMGYRLRY-KRLEEENYEIREFSRTDDHH 877
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
+ L Y + A N AG G E + + T P P + + G+ +T +T
Sbjct: 878 T-VTDLHKGATYSFHLSARNRAGLGEEYVKDIG-TPEDVPSGFPLNLQVVGLTTSTTRLT 935
Query: 126 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 185
W + S II Y V +++ + N T + I L P Y +RV A
Sbjct: 936 WEPPALSERNGRIIHYIVVYRDINSKQNSTNRT-----SDTQMTIQGLRPDTTYDIRVQA 990
Query: 186 FSNGGDGRMSSPAI 199
F++ G G +S P+I
Sbjct: 991 FTSKGGGPIS-PSI 1003
>ZFIN|ZDB-GENE-070615-38 [details] [associations]
symbol:ptprdb "protein tyrosine phosphatase,
receptor type, D, b" species:7955 "Danio rerio" [GO:0016791
"phosphatase activity" evidence=IEA] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] [GO:0016311 "dephosphorylation"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 ZFIN:ZDB-GENE-070615-38
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0004725 GO:GO:0035335
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG053758 EMBL:BX546494
EMBL:BX629341 IPI:IPI00852115 RefSeq:NP_001159520.1
UniGene:Dr.111283 UniGene:Dr.160257 ProteinModelPortal:B8A5J5
Ensembl:ENSDART00000131579 GeneID:100073332 KEGG:dre:100073332
CTD:100073332 GeneTree:ENSGT00400000022339 OMA:SINEHES
NextBio:20788617 Bgee:B8A5J5 Uniprot:B8A5J5
Length = 1934
Score = 169 (64.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 44/129 (34%), Positives = 68/129 (52%)
Query: 70 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 129
GL P + Y+ +V+A N+ G G S RT +AP PP V + ++ +T V W
Sbjct: 376 GLSPYSHYHFRVVAVNSIGRGAPSPTVDARTAEQAPSSPPRRVRGRMLSGSTAMVQWE-- 433
Query: 130 SPSFEEEPIIGYKVRVWEVDQDMSRAN--DTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 187
P ++GY+V + D +S + ++ N L+ I DL+P K Y++RVLAF+
Sbjct: 434 EPEEANGQVVGYRV-YYTSDSSLSVSQWEKEMVRGANFLN--IRDLTPNKTYYIRVLAFT 490
Query: 188 NGGDGRMSS 196
GDG +SS
Sbjct: 491 AVGDGPLSS 499
Score = 169 (64.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 58/209 (27%), Positives = 101/209 (48%)
Query: 6 PQGVFSRGFNSTAINVTWN--PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 63
PQ V +ST++ ++W P + EN G + G+ I+Y + ++ V +S
Sbjct: 609 PQDVTCTSPSSTSLLLSWASPPTD---EN--GIVTGYSIRYVAVERDKDP-VQKISDIPS 662
Query: 64 NWAL--IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N I GL+ T Y V + A+ + G+GPES L RT P PP V + +N T+
Sbjct: 663 NCFRYRIEGLKKGTLYSVTIAAHTDNGQGPESLPILVRTEEDVPSAPPRGVDVVVLNATS 722
Query: 122 VHVTWRYVSPSFEEEPIIGYKV---RVWEVDQDMS-RANDTII-----PVGNTLDADIV- 171
V+W+ + I G++V R ++ +S R + ++ P ++++ +++
Sbjct: 723 ARVSWKPPVAERQHGKIRGFQVTYARRTAGERTVSPRIREHLLRDPQQPQNDSIEHEVIL 782
Query: 172 -DLSPGKRYHMRVLAFSNGGDGRMSSPAI 199
DL P Y + V AF++ GDG S P +
Sbjct: 783 TDLWPNTEYSVTVAAFTSKGDGARSKPIV 811
Score = 126 (49.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 54/217 (24%), Positives = 95/217 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV----Y 56
+P P+GV N+T+ V+W P + E G++ G ++ Y + E T
Sbjct: 705 VPSAPPRGVDVVVLNATSARVSWKPP--VAERQHGKIRGFQVTYARRTAGERTVSPRIRE 762
Query: 57 YLSR--------TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP 108
+L R + + ++ L P+T+Y V V A+ + G+G S+ + RT P P
Sbjct: 763 HLLRDPQQPQNDSIEHEVILTDLWPNTEYSVTVAAFTSKGDGARSKPIVIRTKPSLPGMP 822
Query: 109 PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA 168
+ + +T + W+ P P++GY++ + D ++DT + LDA
Sbjct: 823 --LLTVVSSEDSTALLKWQ--PPPTGLSPVLGYRLSYGQADP----SSDTFMV--QELDA 872
Query: 169 D-----IVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 200
+ + LS G Y R+ A + G G SS +T
Sbjct: 873 EERSYTVSSLSAGVLYVFRLAARTVWGYG--SSAQVT 907
>FB|FBgn0033159 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM;ISS] [GO:0007411 "axon guidance"
evidence=IGI;IMP;TAS] [GO:0008046 "axon guidance receptor activity"
evidence=IMP;NAS] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016319 "mushroom body development"
evidence=IMP] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0006909 "phagocytosis" evidence=IMP] [GO:0051635 "bacterial
cell surface binding" evidence=IDA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0030424 "axon" evidence=IDA]
[GO:0070593 "dendrite self-avoidance" evidence=IMP;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 EMBL:AE013599
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007422
GO:GO:0006909 GO:GO:0016319 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007413 GO:GO:0051635 GO:GO:0021551 GO:GO:0048846 CTD:1826
GO:GO:0070593 GeneTree:ENSGT00690000101869 GO:GO:0008046
UniGene:Dm.2832 GeneID:35652 KEGG:dme:Dmel_CG17800
FlyBase:FBgn0033159 GenomeRNAi:35652 NextBio:794432
InterPro:IPR021012 Pfam:PF12355 RefSeq:NP_001036503.1
ProteinModelPortal:Q0E9K8 SMR:Q0E9K8 STRING:Q0E9K8 PRIDE:Q0E9K8
EnsemblMetazoa:FBtr0111102 UCSC:CG17800-RAN Bgee:Q0E9K8
Uniprot:Q0E9K8
Length = 2037
Score = 169 (64.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 61/205 (29%), Positives = 89/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY----Y 57
P PQ + N T + VTW P R G ++G+ + Y K N + V+ +
Sbjct: 1015 PSGKPQNIKVEPVNQTTMRVTWKPPP--RTEWNGEILGYYVGY-KLSNTNSSYVFETINF 1071
Query: 58 LSRTTRNWAL-IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 116
++ + L + L+ T+Y V + A+N G GP SE + T P +PPS
Sbjct: 1072 ITEEGKEHNLELQNLRVYTQYSVVIQAFNKIGAGPLSEEEKQFTAEGTPSQPPSDTACTT 1131
Query: 117 INPTTVHVTWRYVSPSFEEEP--IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV--D 172
+ T+ V W VSP E I YKV V+ + ++T T +D V
Sbjct: 1132 LTSQTIRVGW--VSPPLESANGVIKTYKV-VYAPSDEWY--DETKRHYKKTASSDTVLHG 1186
Query: 173 LSPGKRYHMRVLAFSNGGDGRMSSP 197
L Y M+VLA + GGDG S P
Sbjct: 1187 LKKYTNYTMQVLATTAGGDGVRSVP 1211
>UNIPROTKB|J9P2T1 [details] [associations]
symbol:NEO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR010916
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00680000099752
PROSITE:PS00430 OMA:DWVIEPV EMBL:AAEX03016284
Ensembl:ENSCAFT00000048784 Uniprot:J9P2T1
Length = 1459
Score = 167 (63.8 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 53/193 (27%), Positives = 90/193 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 563 LPGPAPN-IRAYAASPTSITVTWETPLS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 616
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G ++ RT P P + ++ N
Sbjct: 617 HSHT----INGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDVPGAAPQNLSLEVRNS 672
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ P+ + IIGYK+R + + S +T++P G L I L G Y
Sbjct: 673 KSIVIHWQPPPPATQNGQIIGYKIRYRKASRK-SDVTETLVP-GTQLSQLIEGLDRGTEY 730
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 731 NFRVAALTVNGTG 743
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 52/199 (26%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++IG++I+Y K + +
Sbjct: 657 VPGAAPQNLSLEVRNSKSIVIHWQPPPPATQN--GQIIGYKIRYRKASRKSDVTETLVPG 714
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 715 TQLS-QLIEGLDRGTEYNFRVAALTVNGTGPATDWLAAETFESDLDETRVPEVP-SSLHV 772
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 773 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 824
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 825 DPSSHYVITLKAFNNVGEG 843
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/205 (26%), Positives = 89/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 862 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 920
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+ +T Y VM S T+ P PP V + K P
Sbjct: 921 TLSY-LVTGLKANTLYEFSVMVTKGRRSSTWSMTAHGTTFEFVPTSPPKDVTVVSKEGKP 979
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 980 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1035
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1036 PYYFKIQARNSKGMGPMSE-AVQFR 1059
>MGI|MGI:96721 [details] [associations]
symbol:L1cam "L1 cell adhesion molecule" species:10090 "Mus
musculus" [GO:0005178 "integrin binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IMP] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IMP] [GO:0007159 "leukocyte cell-cell
adhesion" evidence=IMP] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IGI;IDA;IMP] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022409 "positive regulation of
cell-cell adhesion" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IMP;IDA] [GO:0033631 "cell-cell adhesion mediated by
integrin" evidence=IMP] [GO:0033691 "sialic acid binding"
evidence=IDA] [GO:0034109 "homotypic cell-cell adhesion"
evidence=IMP] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IDA] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0045121 "membrane raft"
evidence=ISO] [GO:0050850 "positive regulation of calcium-mediated
signaling" evidence=IDA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:96721 GO:GO:0016021 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0009897 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0042734
GO:GO:0043195 GO:GO:0050850 Reactome:REACT_127416 GO:GO:0042802
GO:GO:0007166 GO:GO:0005178 GO:GO:0033631 GO:GO:0033691
GO:GO:0007157 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0007159 GO:GO:0022409 GO:GO:0034109 HOGENOM:HOG000231380
HOVERGEN:HBG000144 InterPro:IPR026966 Pfam:PF13882 eggNOG:NOG293951
OrthoDB:EOG4NGGKS ChiTaRS:L1CAM EMBL:X12875 IPI:IPI00115762
PIR:S05479 UniGene:Mm.260568 ProteinModelPortal:P11627 SMR:P11627
IntAct:P11627 MINT:MINT-1177002 STRING:P11627 PhosphoSite:P11627
PaxDb:P11627 PRIDE:P11627 InParanoid:P11627 PMAP-CutDB:P11627
CleanEx:MM_L1CAM Genevestigator:P11627
GermOnline:ENSMUSG00000031391 Uniprot:P11627
Length = 1260
Score = 166 (63.5 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 55/200 (27%), Positives = 84/200 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + + +TW P+ + N I +R++ W+ +ET + +T
Sbjct: 713 PEKNPVDVRGEGNETNNMVITWKPLRWMDWN--APQIQYRVQ-WRPQGKQET---WRKQT 766
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ L+V Y +KV A NN G+GPE + + + PQ P I N +
Sbjct: 767 VSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSS 826
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSP 175
TV V WR V + + + GY V W + I+ NT A + L P
Sbjct: 827 TVLVRWRPVDLAQVKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRP 886
Query: 176 GKRYHMRVLAFSNGGDGRMS 195
YH+ V AF+ G G S
Sbjct: 887 YSSYHVEVQAFNGRGLGPAS 906
Score = 163 (62.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 48/198 (24%), Positives = 96/198 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
PQV+P+ FNS+ + V W P++L + ++G L G+ + YW + + + + ++ ++
Sbjct: 811 PQVSPELEDITIFNSSTVLVRWRPVDLAQ--VKGHLKGYNVTYWWKGSQRKHSKRHIHKS 868
Query: 62 ------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
A++ GL+P + Y+V+V A+N G GP SE + T P P A+H++
Sbjct: 869 HIVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPASE-WTFSTPEGVPGHP-EALHLE 926
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
+ T++ + W+ P + GY + V+ + + ++ +L+P
Sbjct: 927 CQSDTSLLLHWQ--PPLSHNGVLTGYLLSYHPVEGESKEQLFFNLSDPELRTHNLTNLNP 984
Query: 176 GKRYHMRVLAFSN-GGDG 192
+Y ++ A + GG G
Sbjct: 985 DLQYRFQLQATTQQGGPG 1002
>RGD|1307157 [details] [associations]
symbol:Prtg "protogenin" species:10116 "Rattus norvegicus"
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:1307157 GO:GO:0016021 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
eggNOG:NOG316920 HOGENOM:HOG000113009 HOVERGEN:HBG101283 CTD:283659
OrthoDB:EOG4J3WG5 HSSP:P23468 EMBL:AY630256 IPI:IPI00370182
RefSeq:NP_001032740.1 UniGene:Rn.12313 ProteinModelPortal:Q2VWP9
PRIDE:Q2VWP9 GeneID:315806 KEGG:rno:315806 UCSC:RGD:1307157
InParanoid:Q2VWP9 NextBio:669899 Genevestigator:Q2VWP9
Uniprot:Q2VWP9
Length = 1193
Score = 165 (63.1 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 50/186 (26%), Positives = 89/186 (47%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
T I ++W PI + RG+++ +R+ + + V L T + L+ GL+PD+
Sbjct: 526 TDILISWLPIPA--KYRRGQVVLYRLSF-RLSTENSIQVVELPGTVHEY-LLEGLEPDSV 581
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA--VHIKGINPTTVHVTWRYVSPSFE 134
Y V++ A G G S RT + K P + +H++ +N TT+ V W + + +
Sbjct: 582 YLVRITAATRVGLGESSVWTSHRTPKATSVKAPKSPELHLEPLNCTTISVRW--LQDTED 639
Query: 135 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+ E Q + G+ L + L P ++YH+R+LA++N DG
Sbjct: 640 PAAIRGYKLFYKEEGQQ--EHGPIFLDTGDLLYT-LSGLDPRRKYHVRLLAYNNLEDGYQ 696
Query: 195 SSPAIT 200
+ ++
Sbjct: 697 ADQTVS 702
Score = 133 (51.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 45/195 (23%), Positives = 88/195 (45%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED--NPEETAVYYLSRTT 62
AP V + +S+AI + W L + ++I + + Y K + N EE V L T
Sbjct: 416 APYNVHAETMSSSAILLAWER-PLYNSD---KVIAYSVHYMKAEGLNNEEYQVV-LGNDT 470
Query: 63 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 122
++ +I L+PD+ Y ++AY G S+ + T P +PP + + +PT +
Sbjct: 471 THY-IIDDLEPDSNYTFYIVAYMPMGASQMSDHVTQNTLEDVPLRPPE-ISLTSRSPTDI 528
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT-IIPVGNTLDADIVD-LSPGKRYH 180
++W + + ++ Y++ +S N ++ + T+ +++ L P Y
Sbjct: 529 LISWLPIPAKYRRGQVVLYRLSF-----RLSTENSIQVVELPGTVHEYLLEGLEPDSVYL 583
Query: 181 MRVLAFSNGGDGRMS 195
+R+ A + G G S
Sbjct: 584 VRITAATRVGLGESS 598
>RGD|619777 [details] [associations]
symbol:L1cam "L1 cell adhesion molecule" species:10116 "Rattus
norvegicus" [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005768 "endosome" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=ISO] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=ISO] [GO:0007159 "leukocyte cell-cell
adhesion" evidence=ISO] [GO:0007166 "cell surface receptor
signaling pathway" evidence=ISO] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0009897 "external side of plasma membrane"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IPI]
[GO:0031175 "neuron projection development" evidence=ISO]
[GO:0033631 "cell-cell adhesion mediated by integrin" evidence=ISO]
[GO:0033691 "sialic acid binding" evidence=ISO] [GO:0034109
"homotypic cell-cell adhesion" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043621 "protein self-association" evidence=ISO] [GO:0045121
"membrane raft" evidence=IDA] [GO:0050850 "positive regulation of
calcium-mediated signaling" evidence=ISO] [GO:0071361 "cellular
response to ethanol" evidence=IEP] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=IEP]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:619777 GO:GO:0016021
GO:GO:0005886 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 GO:GO:0071560 GO:GO:0005768 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0042734 GO:GO:0043195 GO:GO:0050850 Reactome:REACT_127416
GO:GO:0007166 Reactome:REACT_96538 GO:GO:0033631 GO:GO:0033691
GO:GO:0007157 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0007159 GO:GO:0022409 GO:GO:0034109 HOGENOM:HOG000231380
HOVERGEN:HBG000144 InterPro:IPR026966 Pfam:PF13882 eggNOG:NOG293951
CTD:3897 KO:K06550 EMBL:X59149 IPI:IPI00191766 IPI:IPI00230943
PIR:S36126 RefSeq:NP_059041.1 UniGene:Rn.10378
ProteinModelPortal:Q05695 STRING:Q05695 PhosphoSite:Q05695
PRIDE:Q05695 GeneID:50687 KEGG:rno:50687 InParanoid:Q05695
NextBio:610540 ArrayExpress:Q05695 Genevestigator:Q05695
GermOnline:ENSRNOG00000037274 Uniprot:Q05695
Length = 1259
Score = 165 (63.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 47/197 (23%), Positives = 96/197 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
PQV+P+ FNS+ + V W P++L + ++G L G+ + YW + + + + ++ ++
Sbjct: 811 PQVSPELEDITIFNSSTVLVRWRPVDLAQ--VKGHLRGYNVTYWWKGSQRKHSKRHVHKS 868
Query: 62 ------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
A++ GL+P + Y+V+V A+N G GP SE + T P P A+H++
Sbjct: 869 HMVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPASE-WTFSTPEGVPGHP-EALHLE 926
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
+ T++ + W+ P + GY + +D + + ++ +L+P
Sbjct: 927 CQSDTSLLLHWQ--PPLSHNGVLTGYLLSYHPLDGESKEQLFFNLSDPELRTHNLTNLNP 984
Query: 176 GKRYHMRVLAFSNGGDG 192
+Y ++ A ++ G G
Sbjct: 985 DLQYRFQLQATTHQGPG 1001
Score = 162 (62.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 55/201 (27%), Positives = 86/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + + +TW P+ + N I +R++ W+ +ET + +T
Sbjct: 713 PEKNPVDVRGEGNETNNMVITWKPLRWMDWN--APQIQYRVQ-WRPLGKQET---WKEQT 766
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ L+V Y +KV A NN G+GPE + + + PQ P I N +
Sbjct: 767 VSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSS 826
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA------NDTIIPVGNTLDADIVDLS 174
TV V WR V + + + GY V W + + ++P NT A + L
Sbjct: 827 TVLVRWRPVDLAQVKGHLRGYNVTYWWKGSQRKHSKRHVHKSHMVVPA-NTTSAILSGLR 885
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P YH+ V AF+ G G S
Sbjct: 886 PYSSYHVEVQAFNGRGLGPAS 906
>UNIPROTKB|H0Y4H1 [details] [associations]
symbol:PTPRF "Receptor-type tyrosine-protein phosphatase F"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 EMBL:AL583862 EMBL:AC092815
HGNC:HGNC:9670 ChiTaRS:PTPRF ProteinModelPortal:H0Y4H1 PRIDE:H0Y4H1
Ensembl:ENST00000412568 Bgee:H0Y4H1 Uniprot:H0Y4H1
Length = 1291
Score = 165 (63.1 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 53/181 (29%), Positives = 81/181 (44%)
Query: 36 RLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
R+I + + YW ED ++ V + T ++ L L+PDT Y ++ A ++ G G +
Sbjct: 207 RIIMYELVYWAAEDEDQQHKVTF--DPTSSYTL-EDLKPDTLYRFQLAARSDMGVGVFTP 263
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV----------R 144
RT + P PP V ++ +N T VHV W+ PS + I GY+V R
Sbjct: 264 TIEARTAQSMPSGPPRKVEVEPLNSTAVHVYWKLPVPSKQHGQIRGYQVTYVRLENGEPR 323
Query: 145 VWEVDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 203
+ QD+ A P + I L+P Y + V A++ GDG S P I
Sbjct: 324 GLPIIQDVMLAEAQWRPEESEDYETTISGLTPETTYSVTVAAYTTKGDGARSKPKIVTTT 383
Query: 204 G 204
G
Sbjct: 384 G 384
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 50/137 (36%), Positives = 69/137 (50%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P ++Y +V+A N+ G GP SE RT +AP PP V + ++ +T+ V W
Sbjct: 44 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWE 103
Query: 128 YVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV----DLSPGKRYHMR 182
P E ++ GY+V + D SR NT DA ++ L PG Y +R
Sbjct: 104 ---PPEEPNGLVRGYRV-YYTPD---SRRPPNAWHKHNT-DAGLLTTVGSLLPGITYSLR 155
Query: 183 VLAFSNGGDGRMSSPAI 199
VLAF+ GDG SP I
Sbjct: 156 VLAFTAVGDGP-PSPTI 171
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 54/215 (25%), Positives = 96/215 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V +R +++ + V W P E N G + G+R+ Y+ D+ ++ T
Sbjct: 81 PSSPPRRVQARMLSASTMLVQWEPPE--EPN--GLVRGYRV-YYTPDSRRPPNAWHKHNT 135
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
VG L P Y ++V+A+ G+GP S +T + P +P + + T
Sbjct: 136 DAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPAD-FQAEVESDT 194
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRY 179
+ ++W + P +E II Y++ W + + + T P + TL+ DL P Y
Sbjct: 195 RIQLSW-LLPP---QERIIMYELVYWAAEDEDQQHKVTFDPTSSYTLE----DLKPDTLY 246
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
++ A S+ G G + +P I + + SG P
Sbjct: 247 RFQLAARSDMGVG-VFTPTIEARTAQS--MPSGPP 278
>UNIPROTKB|F1LQ76 [details] [associations]
symbol:L1cam "Neural cell adhesion molecule L1"
species:10116 "Rattus norvegicus" [GO:0005178 "integrin binding"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=IEA]
[GO:0007159 "leukocyte cell-cell adhesion" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=IEA] [GO:0022409 "positive
regulation of cell-cell adhesion" evidence=IEA] [GO:0033631
"cell-cell adhesion mediated by integrin" evidence=IEA] [GO:0033691
"sialic acid binding" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0043195 "terminal bouton" evidence=IEA]
[GO:0043621 "protein self-association" evidence=IEA] [GO:0050850
"positive regulation of calcium-mediated signaling" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:619777 GO:GO:0007411
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0042734 GO:GO:0043195 GO:GO:0050850 GO:GO:0007166
GO:GO:0033631 GO:GO:0033691 GO:GO:0007157 InterPro:IPR013098
Pfam:PF07679 GO:GO:0007156 GO:GO:0007159 GO:GO:0022409
GO:GO:0034109 InterPro:IPR026966 Pfam:PF13882 EMBL:AC106169
IPI:IPI00957922 Ensembl:ENSRNOT00000056352 ArrayExpress:F1LQ76
Uniprot:F1LQ76
Length = 1259
Score = 164 (62.8 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 47/197 (23%), Positives = 95/197 (48%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
PQV+P+ FNS+ + V W P++L + ++G L G+ + YW + + + + ++ ++
Sbjct: 811 PQVSPELEDITIFNSSTVLVRWRPVDLAQ--VKGHLRGYNVTYWWKGSQRKHSKRHVHKS 868
Query: 62 ------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
A++ GL+P + Y+V+V A+N G GP SE + T P P A+H++
Sbjct: 869 HMVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPASE-WTFSTPEGVPGHP-EALHLE 926
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
+ T++ + W+ P + GY + +D + + ++ +L+P
Sbjct: 927 CQSDTSLLLHWQ--PPLSHNGVLTGYLLSYHPLDGESKEQLFFNLSDPELRTHNLTNLNP 984
Query: 176 GKRYHMRVLAFSNGGDG 192
+Y ++ A + G G
Sbjct: 985 DLQYRFQLQATTQQGPG 1001
Score = 162 (62.1 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 55/201 (27%), Positives = 86/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + + +TW P+ + N I +R++ W+ +ET + +T
Sbjct: 713 PEKNPVDVRGEGNETNNMVITWKPLRWMDWN--APQIQYRVQ-WRPLGKQET---WKEQT 766
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ L+V Y +KV A NN G+GPE + + + PQ P I N +
Sbjct: 767 VSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSS 826
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA------NDTIIPVGNTLDADIVDLS 174
TV V WR V + + + GY V W + + ++P NT A + L
Sbjct: 827 TVLVRWRPVDLAQVKGHLRGYNVTYWWKGSQRKHSKRHVHKSHMVVPA-NTTSAILSGLR 885
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P YH+ V AF+ G G S
Sbjct: 886 PYSSYHVEVQAFNGRGLGPAS 906
>FB|FBgn0264975 [details] [associations]
symbol:Nrg "Neuroglian" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=NAS;IDA]
[GO:0007560 "imaginal disc morphogenesis" evidence=IMP] [GO:0007158
"neuron cell-cell adhesion" evidence=ISS;NAS;IMP] [GO:0005509
"calcium ion binding" evidence=IDA] [GO:0016319 "mushroom body
development" evidence=NAS;IMP] [GO:0008050 "female courtship
behavior" evidence=IMP;TAS] [GO:0048036 "central complex
development" evidence=IMP;NAS] [GO:0045924 "regulation of female
receptivity" evidence=IMP;NAS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IMP] [GO:0016328 "lateral
plasma membrane" evidence=TAS] [GO:0005918 "septate junction"
evidence=IDA] [GO:0035151 "regulation of tube size, open tracheal
system" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0019991 "septate junction assembly" evidence=IMP] [GO:0005919
"pleated septate junction" evidence=IDA] [GO:0060857 "establishment
of glial blood-brain barrier" evidence=IMP] [GO:0050808 "synapse
organization" evidence=IMP] [GO:0008049 "male courtship behavior"
evidence=IMP] [GO:0021682 "nerve maturation" evidence=IMP]
[GO:0008366 "axon ensheathment" evidence=IMP] [GO:0048675 "axon
extension" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048812 "neuron projection morphogenesis"
evidence=IMP] [GO:0035011 "melanotic encapsulation of foreign
target" evidence=IMP] [GO:0030175 "filopodium" evidence=IDA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 GO:GO:0007173
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0060857 GO:GO:0035151
GO:GO:0019991 EMBL:AE014298 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0050808
GO:GO:0005509 GO:GO:0030175 GO:GO:0005923 GO:GO:0048813
GO:GO:0045924 GO:GO:0016319 GO:GO:0008049 GO:GO:0016328
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007158 InterPro:IPR013151
Pfam:PF00047 GO:GO:0048675 GO:GO:0035011 InterPro:IPR026966
Pfam:PF13882 GeneTree:ENSGT00690000101868 GO:GO:0008366
eggNOG:NOG293951 GO:GO:0021682 GO:GO:0007560 EMBL:M28231
EMBL:AF050085 EMBL:AF050084 EMBL:AY058284 EMBL:BT024971 EMBL:X76243
EMBL:X76244 PIR:A32579 RefSeq:NP_001162704.1 RefSeq:NP_001162705.1
RefSeq:NP_001162706.1 RefSeq:NP_511090.1 RefSeq:NP_727274.1
RefSeq:NP_996380.1 UniGene:Dm.3700 PDB:1CFB PDBsum:1CFB
ProteinModelPortal:P20241 SMR:P20241 DIP:DIP-22412N IntAct:P20241
MINT:MINT-1694518 STRING:P20241 PaxDb:P20241
EnsemblMetazoa:FBtr0071208 EnsemblMetazoa:FBtr0301763
EnsemblMetazoa:FBtr0333523 GeneID:31792 KEGG:dme:Dmel_CG1634
CTD:31792 FlyBase:FBgn0002968 InParanoid:P20241 OrthoDB:EOG4BK3JN
EvolutionaryTrace:P20241 GenomeRNAi:31792 NextBio:775317
Bgee:P20241 GO:GO:0005919 GO:GO:0048036 GO:GO:0008050
Uniprot:P20241
Length = 1302
Score = 162 (62.1 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 50/196 (25%), Positives = 83/196 (42%)
Query: 2 PQVAPQGVFSRGF-NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEE-TAVYYLS 59
P AP R +ST+ + W P+ E++RG G++I+ W E+ EE ++
Sbjct: 815 PLDAPTNFTMRQITSSTSGYMAWTPVS--EESVRGHFKGYKIQTWTENEGEEGLREIHVK 872
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
T N AL+ +PD+K Y +++AYN GP S T P P + +
Sbjct: 873 GDTHN-ALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPS-PVQGLDAYPLGS 930
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM---SRANDTIIPVGNTLDADIVDLSPG 176
+ + W+ P + + GYK+ EV + R D I + L P
Sbjct: 931 SAFMLHWK--KPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPN 988
Query: 177 KRYHMRVLAFSNGGDG 192
+Y + + A + G+G
Sbjct: 989 SKYRISITATTKMGEG 1004
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 50/211 (23%), Positives = 87/211 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P V +G + ++W P+ I N H WK D P A + +
Sbjct: 712 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENN 765
Query: 61 TTRNWA---LIVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIK 115
+W +++ QP KY +KV+A N+ GE +E + + P P+ ++
Sbjct: 766 NIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR 825
Query: 116 GINPTTV-HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 174
I +T ++ W VS GYK++ W ++ + + G+T +A +
Sbjct: 826 QITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFK 884
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
P + + R+LA+ NG S I F E
Sbjct: 885 PDSKNYARILAY-NGRFNGPPSAVIDFDTPE 914
>MGI|MGI:2444710 [details] [associations]
symbol:Prtg "protogenin homolog (Gallus gallus)"
species:10090 "Mus musculus" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:2444710 GO:GO:0016021 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099868 eggNOG:NOG316920 HOGENOM:HOG000113009
HOVERGEN:HBG101283 CTD:283659 OrthoDB:EOG4J3WG5 OMA:QGYKLYY
EMBL:DQ360114 EMBL:AY630257 EMBL:AK039115 EMBL:AK083540
EMBL:BC116336 EMBL:BC116337 IPI:IPI00222414 RefSeq:NP_780694.3
UniGene:Mm.31696 UniGene:Mm.469160 ProteinModelPortal:Q2EY15
SMR:Q2EY15 PhosphoSite:Q2EY15 PRIDE:Q2EY15 DNASU:235472
Ensembl:ENSMUST00000055535 GeneID:235472 KEGG:mmu:235472
UCSC:uc009qqh.1 InParanoid:Q2EY15 NextBio:382704 Bgee:Q2EY15
CleanEx:MM_PRTG Genevestigator:Q2EY15 Uniprot:Q2EY15
Length = 1191
Score = 161 (61.7 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 50/186 (26%), Positives = 89/186 (47%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
T I V+W PI + RG+++ +R+ + + V L T + L+ GL+PD+
Sbjct: 525 TDILVSWLPIPA--KYRRGQVVLYRLSF-RLSTENAIQVVELPGTVHEY-LLEGLKPDSV 580
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA--VHIKGINPTTVHVTWRYVSPSFE 134
Y V++ A G G S RT + K P + +H++ +N TT+ V W + + +
Sbjct: 581 YLVRITAATRVGLGESSVWTSHRTPKATSVKAPKSPELHLEPLNCTTISVRW--LQDTED 638
Query: 135 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+ E Q + G+ L + L P ++YH+R+LA++N +G
Sbjct: 639 PAAIRGYKLFYKEEGQQ--EHGPIFLDTGDLLYT-LSGLDPRRKYHVRLLAYNNMEEGYQ 695
Query: 195 SSPAIT 200
+ ++
Sbjct: 696 ADQTVS 701
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/195 (23%), Positives = 88/195 (45%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED--NPEETAVYYLSRTT 62
AP V + +S+AI + W L + ++I + + Y K + N EE V L T
Sbjct: 415 APYNVHAETMSSSAILLAWER-PLYNSD---KVIAYSVHYMKAEGLNNEEYQVV-LGNDT 469
Query: 63 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 122
++ +I L+PD+ Y ++AY G S+ + T P +PP + + +PT +
Sbjct: 470 THY-IIDDLEPDSNYTFYIVAYMPLGASQMSDHVTQNTLEDVPLRPPE-ISLTSRSPTDI 527
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT-IIPVGNTLDADIVD-LSPGKRYH 180
V+W + + ++ Y++ +S N ++ + T+ +++ L P Y
Sbjct: 528 LVSWLPIPAKYRRGQVVLYRLSF-----RLSTENAIQVVELPGTVHEYLLEGLKPDSVYL 582
Query: 181 MRVLAFSNGGDGRMS 195
+R+ A + G G S
Sbjct: 583 VRITAATRVGLGESS 597
>UNIPROTKB|F1NA63 [details] [associations]
symbol:IGDCC3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
OMA:FAVEPSD GeneTree:ENSGT00680000099868 EMBL:AADN02038933
EMBL:AADN02038934 EMBL:AADN02038935 EMBL:AADN02038936
IPI:IPI00601035 ProteinModelPortal:F1NA63
Ensembl:ENSGALT00000011922 ArrayExpress:F1NA63 Uniprot:F1NA63
Length = 788
Score = 158 (60.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 52/189 (27%), Positives = 88/189 (46%)
Query: 6 PQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRTTR 63
PQ V + ++T I V+W P++ +E +IG+ + K +P E +S++T
Sbjct: 427 PQSVRAETVSATTIQVSWEEPLQNTKE-----IIGYVLHIRKAADPVEMEYQEAVSKSTF 481
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
L+ L+P T Y + AY + G SE + T + P P ++ IK IN T V
Sbjct: 482 Q-QLVTDLEPSTSYSFYIKAYTSRGASKASEVTVVSTLGEVPAMP--SLFIKVINSTAVQ 538
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
TW PS + G+K+ +V +S+ ++ N +I L Y +++
Sbjct: 539 ATWE---PSIKLGQHEGFKLYYRKVH--LSQYTGPVLLASNVTAYNITHLDASMVYEVKL 593
Query: 184 LAFSNGGDG 192
LA++ GDG
Sbjct: 594 LAYNQHGDG 602
Score = 114 (45.2 bits), Expect = 0.00080, P = 0.00080
Identities = 36/155 (23%), Positives = 67/155 (43%)
Query: 52 ETAVYYLSRTTRNWALIVGL-QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 110
ET+ + + + I G+ Q D Y + +A N+AG S R L + + PP
Sbjct: 371 ETSDHIKLKNNNSTLSIYGINQADEAIY-QCIAENSAGSTQASAR-LTVLWAEGLPGPPQ 428
Query: 111 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADI 170
+V + ++ TT+ V+W P + IIGY + + + + + +T +
Sbjct: 429 SVRAETVSATTIQVSWE--EPLQNTKEIIGYVLHIRKAADPVEMEYQEAVSK-STFQQLV 485
Query: 171 VDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
DL P Y + A+++ G + S + +GE
Sbjct: 486 TDLEPSTSYSFYIKAYTSRGASKASEVTVVSTLGE 520
>UNIPROTKB|F1MNL4 [details] [associations]
symbol:NEO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055072 "iron ion homeostasis" evidence=IEA]
[GO:0045296 "cadherin binding" evidence=IEA] [GO:0007520 "myoblast
fusion" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006355 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004872 GO:GO:0007520 InterPro:IPR013098 Pfam:PF07679
GO:GO:0055072 GeneTree:ENSGT00680000099752 OMA:DWVIEPV
EMBL:DAAA02028010 EMBL:DAAA02028011 EMBL:DAAA02028012
EMBL:DAAA02028013 EMBL:DAAA02028014 IPI:IPI01002292
Ensembl:ENSBTAT00000006569 Uniprot:F1MNL4
Length = 1421
Score = 160 (61.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 52/193 (26%), Positives = 89/193 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 497 LPGPAPN-IRACATSPTSITVTWETPLS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 550
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G ++ RT+ P P + ++ N
Sbjct: 551 HSHT----INGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTFSDVPSAAPQNLSLEVRNS 606
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ P+ + I GYKVR + + S +T++ G L I L G Y
Sbjct: 607 KSIVIHWQPPPPAAQNGEITGYKVRYRKASRK-SDVTETLVS-GTQLSQLIEGLDRGTEY 664
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 665 NFRVAALTVNGTG 677
Score = 150 (57.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 812 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 870
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 871 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKP 929
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 930 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 985
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 986 PYYFKIQARNSKGMGPMSE-AVQFR 1009
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/199 (25%), Positives = 91/199 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G + G++++Y K + +S
Sbjct: 591 VPSAAPQNLSLEVRNSKSIVIHWQPPPPAAQN--GEITGYKVRYRKASRKSDVTETLVSG 648
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 649 TQLS-QLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDETRVPEVP-SSLHV 706
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 707 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 758
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 759 DPSSHYVITLKAFNNVGEG 777
>ZFIN|ZDB-GENE-021031-1 [details] [associations]
symbol:neo1 "neogenin 1" species:7955 "Danio rerio"
[GO:0005021 "vascular endothelial growth factor-activated receptor
activity" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0048010 "vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0001841
"neural tube formation" evidence=IMP] [GO:0001756 "somitogenesis"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-021031-1 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0001756 InterPro:IPR013098 Pfam:PF07679 GO:GO:0001841
HOGENOM:HOG000230686 HOVERGEN:HBG005455 HSSP:Q9UQH9 CTD:4756
KO:K06766 EMBL:AY029280 IPI:IPI00496883 RefSeq:NP_775325.1
UniGene:Dr.18117 ProteinModelPortal:Q8AY67 SMR:Q8AY67 IntAct:Q8AY67
STRING:Q8AY67 GeneID:266983 KEGG:dre:266983 InParanoid:Q8AY67
NextBio:20804845 ArrayExpress:Q8AY67 Uniprot:Q8AY67
Length = 1428
Score = 159 (61.0 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 57/206 (27%), Positives = 90/206 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P + P GV + N I VTW L + + ++ WK + P T + ++
Sbjct: 834 IPMLPPVGVQASVLNQDTIKVTWADNSLPKNQKITDARYYTVR-WKTNIPANTK-FKVAN 891
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGIN 118
TT + + GL+P+T Y VM S T+ P PP V + K
Sbjct: 892 TTTLFHTVTGLKPNTLYEFSVMVTKGRRTSTWSMTAHGTTFESIPSSPPKDVTVVSKEGR 951
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPG 176
P T+ V W+ PS I GY + + D + +D +I PV GN L I +L+
Sbjct: 952 PKTIIVNWQ--PPSEANGKITGYII-YYSTDVK-AEVHDWVIEPVVGNRLTHQIQELTLD 1007
Query: 177 KRYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1008 TTYYFKIQARNSKGMGPMSE-AVQFR 1032
Score = 149 (57.5 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 53/206 (25%), Positives = 97/206 (47%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--DNPEETAVYYL 58
+P AP + + + + ++++W+ + LI G + ++I Y ++ D+ ++ V L
Sbjct: 518 VPGPAPN-LHAVVMSPSTVSLSWD-VPLIGN---GEIQNYKIYYMEKGMDSEQDLDVNTL 572
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
S T + GL+ T+Y +++AYN G G +E RTY P PP + ++ +N
Sbjct: 573 SYT------MTGLKKFTEYSFRLVAYNKHGPGVSTEDISVRTYSDVPSSPPQNMTVEVLN 626
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
++ + W+ + I GYK+R + + A I G+ L I L G
Sbjct: 627 SKSLMIRWQPPPADAQNGEITGYKIRYRKGTRKSEVAE---ITSGSQLYQLIDGLQRGTE 683
Query: 179 YHMRVLAFSNGGDGRMS--SPAITFQ 202
Y +RV A + G G + + A TF+
Sbjct: 684 YMLRVSAMTVNGTGPATDWTTAETFE 709
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 51/198 (25%), Positives = 93/198 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ + NS ++ + W P +N G + G++I+Y K E A ++
Sbjct: 612 VPSSPPQNMTVEVLNSKSLMIRWQPPPADAQN--GEITGYKIRYRKGTRKSEVAE--ITS 667
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK---APQKP--PSAVHIK 115
++ + LI GLQ T+Y ++V A G GP ++ T+ + P PS++H++
Sbjct: 668 GSQLYQLIDGLQRGTEYMLRVSAMTVNGTGPATDWTTAETFESDLDESRVPDVPSSLHVR 727
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDLS 174
+ + V V+W +P E + I+ VR + + + + I V I +L+
Sbjct: 728 SLVNSIV-VSW---TPP-ENQDIV---VRGYSISYGIGSPHAQTIKVDYKQRYYTIENLN 779
Query: 175 PGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 780 PNSHYVITLKAFNNVGEG 797
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 53/191 (27%), Positives = 80/191 (41%)
Query: 5 APQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 63
AP+ V + ++ + +TW P E G + + + Y E E V SR
Sbjct: 422 APRDVVASLVSTRFLKLTWRLPAEP-----HGDDVTYSVYYSLEGTNRERIVN-TSRPGE 475
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA--VHIKGINPTT 121
I L PDTKY +V+A+N G G ES L+ + Q P A +H ++P+T
Sbjct: 476 MQVTIQNLMPDTKYAFRVVAHNKNGPG-ESSVPLKVETQPEVQVPGPAPNLHAVVMSPST 534
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V ++W P I YK+ E D + D NTL + L Y
Sbjct: 535 VSLSWDV--PLIGNGEIQNYKIYYMEKGMDSEQDLDV-----NTLSYTMTGLKKFTEYSF 587
Query: 182 RVLAFSNGGDG 192
R++A++ G G
Sbjct: 588 RLVAYNKHGPG 598
>UNIPROTKB|F1PDU1 [details] [associations]
symbol:NEO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00680000099752 EMBL:AAEX03016284
Ensembl:ENSCAFT00000028194 Uniprot:F1PDU1
Length = 1432
Score = 158 (60.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 54/196 (27%), Positives = 91/196 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 510 LPGPAPN-IRAYAASPTSITVTWETPLS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 563
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKA---PQKPPSAVHIKG 116
+ I GL+ T+Y +V+AYN G G ++ RT A P P + ++
Sbjct: 564 HSHT----INGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDACPVPGAAPQNLSLEV 619
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
N ++ + W+ P+ + IIGYK+R + + S +T++P G L I L G
Sbjct: 620 RNSKSIVIHWQPPPPATQNGQIIGYKIRYRKASRK-SDVTETLVP-GTQLSQLIEGLDRG 677
Query: 177 KRYHMRVLAFSNGGDG 192
Y+ RV A + G G
Sbjct: 678 TEYNFRVAALTVNGTG 693
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 52/199 (26%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++IG++I+Y K + +
Sbjct: 607 VPGAAPQNLSLEVRNSKSIVIHWQPPPPATQN--GQIIGYKIRYRKASRKSDVTETLVPG 664
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 665 TQLS-QLIEGLDRGTEYNFRVAALTVNGTGPATDWLAAETFESDLDETRVPEVP-SSLHV 722
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 723 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 774
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 775 DPSSHYVITLKAFNNVGEG 793
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 55/205 (26%), Positives = 89/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 833 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 891
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+ +T Y VM S T+ P PP V + K P
Sbjct: 892 TLSY-LVTGLKANTLYEFSVMVTKGRRSSTWSMTAHGTTFEFVPTSPPKDVTVVSKEGKP 950
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 951 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1006
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1007 PYYFKIQARNSKGMGPMSE-AVQFR 1030
>UNIPROTKB|E2R2V6 [details] [associations]
symbol:L1CAM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050850 "positive regulation of
calcium-mediated signaling" evidence=IEA] [GO:0043621 "protein
self-association" evidence=IEA] [GO:0043195 "terminal bouton"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0034109
"homotypic cell-cell adhesion" evidence=IEA] [GO:0033691 "sialic
acid binding" evidence=IEA] [GO:0033631 "cell-cell adhesion
mediated by integrin" evidence=IEA] [GO:0022409 "positive
regulation of cell-cell adhesion" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IEA] [GO:0007159 "leukocyte cell-cell
adhesion" evidence=IEA] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0009897 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0042734
GO:GO:0043195 GO:GO:0050850 GO:GO:0007166 GO:GO:0033631
GO:GO:0033691 GO:GO:0007157 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007156 GO:GO:0007159 GO:GO:0022409 GO:GO:0034109
InterPro:IPR026966 Pfam:PF13882 GeneTree:ENSGT00690000101868
CTD:3897 KO:K06550 OMA:MDWNAPQ EMBL:AAEX03027091 RefSeq:XP_549364.2
ProteinModelPortal:E2R2V6 Ensembl:ENSCAFT00000030800 GeneID:492244
KEGG:cfa:492244 NextBio:20864858 Uniprot:E2R2V6
Length = 1256
Score = 157 (60.3 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 49/197 (24%), Positives = 91/197 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR- 60
PQ +P+ + NS+A+ V W P++ + ++G L G+ + YW E + + ++ R
Sbjct: 812 PQASPEMEGIKILNSSAVLVRWWPVDPAQ--VKGHLRGYNVTYWWEGSQRRHSKRHVHRG 869
Query: 61 ---TTRNW--ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
N A++ GL+P + Y +++ A+N G GP SE T P P A+H++
Sbjct: 870 HVVVAANTTSAVLGGLRPYSSYRLELRAFNGRGLGPASEMTFS-TPEGVPGHP-EALHLE 927
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
+ T++ + W+ P + GY + +D +P ++ +LSP
Sbjct: 928 CQSDTSLLLHWQ--PPLSHNGVLTGYVLSYHPLDDGDKEQLSFDLPDPELRTHNLTNLSP 985
Query: 176 GKRYHMRVLAFSNGGDG 192
RY ++ A + G G
Sbjct: 986 HLRYRFQLQATTKEGPG 1002
Score = 151 (58.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 54/210 (25%), Positives = 89/210 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G ++ + +TW P+ + N + +R++ W+ P+ T + +
Sbjct: 714 PEKNPVDVKGEGNETSNMVITWKPLRWMDWN--APQVQYRVQ-WR---PQGTRGAWQEQI 767
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ L+V Y +KV A N+ G+GPE + + + PQ P IK +N +
Sbjct: 768 VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPEMEGIKILNSS 827
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVW-EVDQDMSRANDT----IIPVGNTLDADIVDLSP 175
V V W V P+ + + GY V W E Q ++ NT A + L P
Sbjct: 828 AVLVRWWPVDPAQVKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSAVLGGLRP 887
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y + + AF+ G G S +TF E
Sbjct: 888 YSSYRLELRAFNGRGLGPASE--MTFSTPE 915
>UNIPROTKB|F1MW33 [details] [associations]
symbol:CHL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050890 "cognition" evidence=IEA] [GO:0045177 "apical
part of cell" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0002020 "protease
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0007411 GO:GO:0001764
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0050890 GO:GO:0030425
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0045177 GO:GO:0008344 InterPro:IPR013098
Pfam:PF07679 OMA:WEAGDDH InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 EMBL:DAAA02053962 EMBL:DAAA02053963
EMBL:DAAA02053964 EMBL:DAAA02053965 EMBL:DAAA02053966
EMBL:DAAA02053967 EMBL:DAAA02053968 IPI:IPI00705625
ProteinModelPortal:F1MW33 Ensembl:ENSBTAT00000032069 Uniprot:F1MW33
Length = 1200
Score = 156 (60.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 56/206 (27%), Positives = 89/206 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ + + + + W P++ + +N G + +R+ WK P+ V + T
Sbjct: 715 PDKNPQNIRVQASQPKEMIIKWEPLKAMEQNGPG--LEYRVT-WK---PQGAPVEWEEET 768
Query: 62 TRNWALIVGLQPDT--KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
N L V + P Y V+V A N+ G GPE + + + P P + IN
Sbjct: 769 VTNHTLRV-MTPAVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDAAPVIQGVDVINS 827
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T V VTW + + GY+V W+ S + P + +I+ S G +
Sbjct: 828 TLVKVTWSTIPKERVHGHLKGYQVNWWKTK---SLLDGRTHPK----EVNILRFS-GSEF 879
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGE 205
H+ VLA+++ G G S P I FQ E
Sbjct: 880 HLTVLAYNSKGAGPESEPFI-FQTPE 904
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/196 (27%), Positives = 93/196 (47%)
Query: 2 PQVAP--QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
P AP QGV NST + VTW+ I +E + G L G+++ +WK T
Sbjct: 813 PDAAPVIQGVDV--INSTLVKVTWSTIP--KERVHGHLKGYQVNWWK------TKSLLDG 862
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
RT I+ +++++ V+AYN+ G GPESE ++ +T P++P IK ++
Sbjct: 863 RTHPKEVNILRFS-GSEFHLTVLAYNSKGAGPESEPFIFQTPEGVPEQPTFLKVIK-VDK 920
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQD-MSRANDTIIPVGNTLDADIVDLSPGK 177
T ++W P + GY ++ + D D + ND I + +++LS
Sbjct: 921 DTATLSWGL--PKKLNGNLTGYLLQYQIINDTDEIGELNDINITTPSKPSWRLLNLSATT 978
Query: 178 RYHMRVLAFSNGGDGR 193
+Y + A ++ G G+
Sbjct: 979 KYKFYLRACTSKGCGK 994
>UNIPROTKB|F1NSJ4 [details] [associations]
symbol:NFASC "Neurofascin" species:9031 "Gallus gallus"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 PANTHER:PTHR10489:SF41
EMBL:AADN02044911 IPI:IPI00572971 ProteinModelPortal:F1NSJ4
Ensembl:ENSGALT00000000916 ArrayExpress:F1NSJ4 Uniprot:F1NSJ4
Length = 1297
Score = 156 (60.0 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 58/226 (25%), Positives = 98/226 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN------PEETAV 55
P+ AP V R NSTAI +TW + L + I+G+L +R +W++ + +
Sbjct: 844 PKAAPTDVRIRVLNSTAIALTWTRVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQ 901
Query: 56 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
Y RN ++ L P + Y ++++ N G+GP SE T P P + I+
Sbjct: 902 YVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSP-RYLRIR 960
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 961 QPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQRT 1016
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPAITFQMGEEKEFKSGSPAL 216
P RY + A + GDG + SPA+ + E+ F G AL
Sbjct: 1017 DPISRYRFFLRARTQVGDGEVIVEESPAL---LNEDAVFPQGCTAL 1059
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/201 (22%), Positives = 85/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P++ P GV G + +TW P+ + G + + ++ W+ +P + +Y + T
Sbjct: 746 PEINPTGVQGAGTQKNNMEITWTPLNATQAY--GPNLRYIVR-WRRRDPRGS--WY-NET 799
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +V P Y +KV A N+ G PE E Y+ + P+ P+ V I+ +N T
Sbjct: 800 VKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNST 859
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM------SRANDTIIPVGNTLDADIVDLS 174
+ +TW V + + Y+ W D + S+ + G+ + L
Sbjct: 860 AIALTWTRVHLDTIQGQLKEYRAYFWR-DSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLF 918
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 919 PYSNYKLEMVVTNGRGDGPRS 939
>UNIPROTKB|F1NTM1 [details] [associations]
symbol:ROBO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001657 "ureteric bud development" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0030673
"axolemma" evidence=IEA] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0050925 "negative regulation of negative
chemotaxis" evidence=IEA] [GO:0061364 "apoptotic process involved
in luteolysis" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0030673 GO:GO:0032870
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 GO:GO:0050925
GeneTree:ENSGT00660000095158 OMA:AKQTWHI EMBL:AADN02042872
EMBL:AADN02042873 EMBL:AADN02042874 EMBL:AADN02042875
EMBL:AADN02042876 EMBL:AADN02042877 EMBL:AADN02042878
EMBL:AADN02042879 EMBL:AADN02042880 IPI:IPI00588304
Ensembl:ENSGALT00000036827 ArrayExpress:F1NTM1 Uniprot:F1NTM1
Length = 1359
Score = 154 (59.3 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 53/192 (27%), Positives = 87/192 (45%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY---LSRTTRNWALIVGLQP 73
T + VTW ++ + I+G +R+ Y + AV+ + T A++V L+
Sbjct: 631 TTVQVTWT-VDRQSQFIQG----YRVMYRQTSGLPSPAVWQNLEVKVPTERSAVLVNLKK 685
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI---NPTTVHVTWRYVS 130
Y +KV Y N +G +SE RT +AP PP +V + + N T++ ++W
Sbjct: 686 GVTYEIKVRPYFNEFQGMDSESKSARTTEEAPSAPPQSVTVLTVGNHNSTSISISWDPPP 745
Query: 131 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-----LSPGKRYHMRVLA 185
P + I YK+ W + N+T + T+DA I L PG +Y + V A
Sbjct: 746 PDHQNGIIQEYKI--WCL------GNETRFHINKTVDAAIRSVVIGGLYPGIQYRVEVAA 797
Query: 186 FSNGGDGRMSSP 197
++ G G S P
Sbjct: 798 STSAGVGVKSEP 809
Score = 40 (19.1 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 194 MSSPAITFQMGEEKEFKSGS-PAL 216
+S+ A+TFQ G+ +GS P L
Sbjct: 871 LSNYAVTFQRGDGGLMSNGSRPGL 894
>UNIPROTKB|Q59FP8 [details] [associations]
symbol:NEO1 "Neogenin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
HOGENOM:HOG000230686 HOVERGEN:HBG005455 EMBL:AC068397 EMBL:AC104420
EMBL:AC129980 RefSeq:NP_001166094.1 RefSeq:NP_002490.2
UniGene:Hs.388613 GeneID:4756 KEGG:hsa:4756 CTD:4756 HGNC:HGNC:7754
PharmGKB:PA31555 KO:K06766 ChiTaRS:NEO1 GenomeRNAi:4756
NextBio:18324 IPI:IPI00556554 RefSeq:NP_001166095.1 EMBL:AB209412
ProteinModelPortal:Q59FP8 STRING:Q59FP8 PRIDE:Q59FP8
Ensembl:ENST00000560328 ArrayExpress:Q59FP8 Bgee:Q59FP8
Uniprot:Q59FP8
Length = 1130
Score = 155 (59.6 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 234 LPGPAPN-LRAYAASPTSITVTWETPVS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 287
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G + RT P P + ++ N
Sbjct: 288 HSYT----INGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDVPSAAPQNLSLEVRNS 343
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ +P+ + I GYK+R + + S +T++ G L I L G Y
Sbjct: 344 KSIMIHWQPPAPATQNGQITGYKIRYRKASRK-SDVTETLVS-GTQLSQLIEGLDRGTEY 401
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 402 NFRVAALTINGTG 414
Score = 150 (57.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 533 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 591
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 592 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKP 650
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 651 KTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 706
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 707 PYYFKIQARNSKGMGPMSE-AVQFR 730
Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 52/199 (26%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++ G++I+Y K + +S
Sbjct: 328 VPSAAPQNLSLEVRNSKSIMIHWQPPAPATQN--GQITGYKIRYRKASRKSDVTETLVSG 385
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 386 TQLS-QLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVP-SSLHV 443
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 444 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 495
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 496 DPSSHYVITLKAFNNVGEG 514
>MGI|MGI:1274781 [details] [associations]
symbol:Robo1 "roundabout homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0002042 "cell migration involved
in sprouting angiogenesis" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO;IGI;IMP]
[GO:0008046 "axon guidance receptor activity" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016199 "axon midline choice point recognition"
evidence=IGI] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=ISO] [GO:0021891
"olfactory bulb interneuron development" evidence=IGI] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0030275 "LRR domain
binding" evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030673
"axolemma" evidence=IDA] [GO:0033600 "negative regulation of
mammary gland epithelial cell proliferation" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=ISO] [GO:0050772 "positive
regulation of axonogenesis" evidence=ISO] [GO:0050925 "negative
regulation of negative chemotaxis" evidence=ISO] [GO:0060763
"mammary duct terminal end bud growth" evidence=IMP] [GO:0070100
"negative regulation of chemokine-mediated signaling pathway"
evidence=ISO] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 MGI:MGI:1274781
GO:GO:0016021 GO:GO:0008285 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0016199
GO:GO:0030673 Reactome:REACT_127416 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR003596 SMART:SM00406 GO:GO:0060763 CTD:6091
eggNOG:NOG238978 HOGENOM:HOG000010267 HOVERGEN:HBG073476 KO:K06753
OrthoDB:EOG44QT01 EMBL:Y17793 IPI:IPI00130664 PIR:T30805
RefSeq:NP_062286.2 UniGene:Mm.310772 ProteinModelPortal:O89026
SMR:O89026 STRING:O89026 PhosphoSite:O89026 PaxDb:O89026
PRIDE:O89026 DNASU:19876 GeneID:19876 KEGG:mmu:19876
UCSC:uc007zrb.1 InParanoid:O89026 NextBio:297362 CleanEx:MM_ROBO1
Genevestigator:O89026 GO:GO:0021891 Uniprot:O89026
Length = 1612
Score = 153 (58.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S+++ V W ++ + I+G I +R E V+ + T+N +I L+
Sbjct: 648 SSSSVEVHWT-VDQQSQYIQGYKILYRPS-GASHGESEWLVFEVRTPTKNSVVIPDLRKG 705
Query: 75 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPS 132
Y +K + N +G +SE +T +AP PP +V + N T + VTW+
Sbjct: 706 VNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPRSVTVSKNDGNGTAILVTWQPPPED 765
Query: 133 FEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ + YKV W + + N T+ G+T I L PG RY + V A + G
Sbjct: 766 TQNGMVQEYKV--WCLGNETKYHINKTVD--GSTFSVVIPSLVPGIRYSVEVAASTGAGP 821
Query: 192 GRMSSP 197
G S P
Sbjct: 822 GVKSEP 827
Score = 43 (20.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P +T+Q G E G P L
Sbjct: 905 TPTVTYQRGGEAVSSGGRPGL 925
>RGD|619837 [details] [associations]
symbol:Neo1 "neogenin 1" species:10116 "Rattus norvegicus"
[GO:0004872 "receptor activity" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007520 "myoblast fusion" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045296
"cadherin binding" evidence=ISO] [GO:0055072 "iron ion homeostasis"
evidence=ISO] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:619837 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 eggNOG:NOG249790
HOVERGEN:HBG005455 EMBL:U68726 IPI:IPI00562138 UniGene:Rn.10667
ProteinModelPortal:P97603 SMR:P97603 STRING:P97603
PhosphoSite:P97603 PRIDE:P97603 UCSC:RGD:619837 InParanoid:P97603
Genevestigator:P97603 GermOnline:ENSRNOG00000006490 Uniprot:P97603
Length = 1377
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 507 LPGPAPN-IRAYATSPTSITVTWETPLS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 560
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G ++ RT P P + ++ N
Sbjct: 561 HSYT----INGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDVPSAAPQNLSLEVRNS 616
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ S + + I GYK+R + + S +T++ G L I L G Y
Sbjct: 617 KSIVIHWQPPSSATQNGQITGYKIRYRKASRK-SDVTETVV-TGTQLSQLIEGLDRGTEY 674
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 675 NFRVAALTVNGTG 687
Score = 150 (57.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 822 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 880
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 881 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKP 939
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 940 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 995
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 996 PYYFKIQARNSKGMGPMSE-AVQFR 1019
Score = 141 (54.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 51/199 (25%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++ G++I+Y K + ++
Sbjct: 601 VPSAAPQNLSLEVRNSKSIVIHWQPPSSATQN--GQITGYKIRYRKASRKSDVTETVVTG 658
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 659 TQLS-QLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDESRVPEVP-SSLHV 716
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 717 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 768
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 769 DPSSHYVITLKAFNNVGEG 787
>UNIPROTKB|F1M0Z6 [details] [associations]
symbol:Neo1 "Neogenin" species:10116 "Rattus norvegicus"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 RGD:619837
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00680000099752
IPI:IPI00366652 PRIDE:F1M0Z6 Ensembl:ENSRNOT00000009496
ArrayExpress:F1M0Z6 Uniprot:F1M0Z6
Length = 1427
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 515 LPGPAPN-IRAYATSPTSITVTWETPLS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 568
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G ++ RT P P + ++ N
Sbjct: 569 HSYT----INGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDVPSAAPQNLSLEVRNS 624
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ S + + I GYK+R + + S +T++ G L I L G Y
Sbjct: 625 KSIVIHWQPPSSATQNGQITGYKIRYRKASRK-SDVTETVV-TGTQLSQLIEGLDRGTEY 682
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 683 NFRVAALTVNGTG 695
Score = 150 (57.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 830 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 888
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 889 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKP 947
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 948 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1003
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1004 PYYFKIQARNSKGMGPMSE-AVQFR 1027
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/199 (25%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++ G++I+Y K + ++
Sbjct: 609 VPSAAPQNLSLEVRNSKSIVIHWQPPSSATQN--GQITGYKIRYRKASRKSDVTETVVTG 666
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 667 TQLS-QLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDESRVPEVP-SSLHV 724
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 725 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 776
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 777 DPSSHYVITLKAFNNVGEG 795
>UNIPROTKB|F1LWF5 [details] [associations]
symbol:Neo1 "Neogenin" species:10116 "Rattus norvegicus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007520 "myoblast fusion" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0045296 "cadherin binding"
evidence=IEA] [GO:0055072 "iron ion homeostasis" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:619837 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0006355 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0004872
GO:GO:0007520 InterPro:IPR013098 Pfam:PF07679 GO:GO:0055072
GeneTree:ENSGT00680000099752 IPI:IPI00951667
Ensembl:ENSRNOT00000065980 ArrayExpress:F1LWF5 Uniprot:F1LWF5
Length = 1438
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 515 LPGPAPN-IRAYATSPTSITVTWETPLS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 568
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G ++ RT P P + ++ N
Sbjct: 569 HSYT----INGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDVPSAAPQNLSLEVRNS 624
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ S + + I GYK+R + + S +T++ G L I L G Y
Sbjct: 625 KSIVIHWQPPSSATQNGQITGYKIRYRKASRK-SDVTETVV-TGTQLSQLIEGLDRGTEY 682
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 683 NFRVAALTVNGTG 695
Score = 150 (57.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 830 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 888
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 889 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKP 947
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 948 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1003
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1004 PYYFKIQARNSKGMGPMSE-AVQFR 1027
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/199 (25%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++ G++I+Y K + ++
Sbjct: 609 VPSAAPQNLSLEVRNSKSIVIHWQPPSSATQN--GQITGYKIRYRKASRKSDVTETVVTG 666
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 667 TQLS-QLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDESRVPEVP-SSLHV 724
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 725 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 776
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 777 DPSSHYVITLKAFNNVGEG 795
>UNIPROTKB|Q3S3D7 [details] [associations]
symbol:Q3S3D7 "Neogenin variant 1" species:8354 "Xenopus
borealis" [GO:0007411 "axon guidance" evidence=IMP] [GO:0008046
"axon guidance receptor activity" evidence=IMP] [GO:0030900
"forebrain development" evidence=IMP] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0030900 InterPro:IPR013098
Pfam:PF07679 HOVERGEN:HBG005455 GO:GO:0008046 EMBL:DQ173198
ProteinModelPortal:Q3S3D7 SMR:Q3S3D7 Uniprot:Q3S3D7
Length = 1441
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + S A+ +TW L + + ++ WK + P T Y ++ +
Sbjct: 866 PMLPPVGVQATILGSDAVRLTWADNSLPKNQKITDSRYYTVR-WKTNIPANTK-YKMANS 923
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 924 TTLIYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFESVPSSPPKDVTVVSKEGKP 983
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS + GY + + D + +D +I PV GN L I +L+
Sbjct: 984 RTIIVNWQ--PPSEANGKMTGYII-YYSTDAQ-AELHDWVIEPVIGNRLTHQIQELTLDT 1039
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1040 PYYFKIQARNSKGMGPMSE-AVLFR 1063
Score = 149 (57.5 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 52/209 (24%), Positives = 96/209 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + +S +I V W P L +N G ++G++ +Y K ET+ +
Sbjct: 645 VPSAAPQNLTLGVRSSQSILVQWQPPPLGSQN--GLIVGYKARYRKTTRKSETSEMLVDA 702
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK---APQKP--PSAVHIK 115
L GL+ DT+Y +V+A G GP ++ T+ + P PS++H++
Sbjct: 703 QLSY--LFTGLERDTEYSFRVVALTVNGSGPATDWVSAETFESDLDESRVPDVPSSLHVR 760
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LS 174
+ T + V+W +P + ++ VR + + + + + V + +D L
Sbjct: 761 PL-VTNIVVSW---TPPENQHQVV---VRGYAIGYGLGSPHAQTVRVDHKQRYYTIDNLD 813
Query: 175 PGKRYHMRVLAFSNGGDG-RMSSPAITFQ 202
P Y + + AF+N G+G + A+T Q
Sbjct: 814 PSSHYVISLRAFNNVGEGIPLYESAVTRQ 842
>UNIPROTKB|Q90610 [details] [associations]
symbol:Q90610 "Neogenin" species:9031 "Gallus gallus"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155 InterPro:IPR013098
Pfam:PF07679 eggNOG:NOG249790 HOGENOM:HOG000230686
HOVERGEN:HBG005455 EMBL:U07644 IPI:IPI00819005 PIR:I50600
UniGene:Gga.4738 ProteinModelPortal:Q90610 SMR:Q90610 IntAct:Q90610
STRING:Q90610 PRIDE:Q90610 Uniprot:Q90610
Length = 1443
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 52/196 (26%), Positives = 91/196 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWK--EDNPEETAVYY 57
+P AP + + + T++ VTW P+ N G + +++ Y + +D+ ++ V
Sbjct: 524 LPGPAPN-IRAYAGSPTSVTVTWETPLS---GN--GEIQNYKLYYMEKGQDSEQDVDVAG 577
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
LS T I GL+ T+Y +V+AYN G G ++ + RT P P + ++
Sbjct: 578 LSYT------ITGLKKYTEYSFRVVAYNKHGPGVSTQDVVVRTLSDVPSAAPQNLTLEAR 631
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPG 176
N ++ + W+ I GYK+R +V SR +D VG T +++ L G
Sbjct: 632 NSKSIMLHWQPPPAGTHSGQITGYKIRYRKV----SRKSDVTESVGGTQLFQLIEGLERG 687
Query: 177 KRYHMRVLAFSNGGDG 192
Y+ R+ A + G G
Sbjct: 688 TEYNFRIAAMTVNGTG 703
Score = 151 (58.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 838 PMMPPVGVQASILSHDTIRITWADNSLPKNQKITDARYYTVR-WKTNIPANTKYKTANAT 896
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 897 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKP 955
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 956 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1011
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1012 PYYFKIQARNSKGMGPMSE-AVQFR 1035
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 57/191 (29%), Positives = 83/191 (43%)
Query: 5 APQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 63
AP+ V + ++ I +TW P+ + +G + + I Y KE E V SR
Sbjct: 427 APRDVVATLVSTRFIRLTWRTPVS----DPQGDNLTYSIFYTKEGINRER-VENTSRPGE 481
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTT 121
+I L P+T Y +V+A N G G ES L+ + Q P A +I+ +PT+
Sbjct: 482 TQVMIQNLMPETVYVFRVVAQNKHGHG-ESSAPLKVATQPEVQLPGPAPNIRAYAGSPTS 540
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V VTW +P I YK+ E QD + D G L I L Y
Sbjct: 541 VTVTWE--TPLSGNGEIQNYKLYYMEKGQDSEQDVDV---AG--LSYTITGLKKYTEYSF 593
Query: 182 RVLAFSNGGDG 192
RV+A++ G G
Sbjct: 594 RVVAYNKHGPG 604
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P + G++ G++I+Y K + V
Sbjct: 618 VPSAAPQNLTLEARNSKSIMLHWQPPPAGTHS--GQITGYKIRYRKVSRKSD--VTESVG 673
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T+ + LI GL+ T+Y ++ A G GP ++ T+ + P+ P S++H+
Sbjct: 674 GTQLFQLIEGLERGTEYNFRIAAMTVNGTGPATDWVSAETFESDLDESRVPEVP-SSLHV 732
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 733 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 784
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 785 DPSSHYVITLKAFNNVGEG 803
>UNIPROTKB|B7ZKN0 [details] [associations]
symbol:NEO1 "NEO1 protein" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 HOVERGEN:HBG005455 EMBL:AC068397
EMBL:AC104420 EMBL:AC129980 UniGene:Hs.388613 GeneID:4756
KEGG:hsa:4756 CTD:4756 HGNC:HGNC:7754 PharmGKB:PA31555 KO:K06766
ChiTaRS:NEO1 GenomeRNAi:4756 NextBio:18324 EMBL:BC143271
IPI:IPI00556554 RefSeq:NP_001166095.1 SMR:B7ZKN0 STRING:B7ZKN0
Ensembl:ENST00000558964 UCSC:uc002avn.4 Uniprot:B7ZKN0
Length = 1450
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 538 LPGPAPN-LRAYAASPTSITVTWETPVS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 591
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G + RT P P + ++ N
Sbjct: 592 HSYT----INGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDVPSAAPQNLSLEVRNS 647
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ +P+ + I GYK+R + + S +T++ G L I L G Y
Sbjct: 648 KSIMIHWQPPAPATQNGQITGYKIRYRKASRK-SDVTETLVS-GTQLSQLIEGLDRGTEY 705
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 706 NFRVAALTINGTG 718
Score = 150 (57.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 853 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 911
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 912 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKP 970
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 971 KTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1026
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1027 PYYFKIQARNSKGMGPMSE-AVQFR 1050
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 52/199 (26%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++ G++I+Y K + +S
Sbjct: 632 VPSAAPQNLSLEVRNSKSIMIHWQPPAPATQN--GQITGYKIRYRKASRKSDVTETLVSG 689
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 690 TQLS-QLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVP-SSLHV 747
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 748 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 799
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 800 DPSSHYVITLKAFNNVGEG 818
>UNIPROTKB|Q92859 [details] [associations]
symbol:NEO1 "Neogenin" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0045296 "cadherin binding" evidence=IEA]
[GO:0055072 "iron ion homeostasis" evidence=IGI] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0042692 "muscle cell differentiation" evidence=TAS] [GO:0051149
"positive regulation of muscle cell differentiation" evidence=TAS]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 Reactome:REACT_111045 GO:GO:0007411 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006355 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0004872 GO:GO:0042692 GO:GO:0051149
GO:GO:0007520 Reactome:REACT_115433 InterPro:IPR013098 Pfam:PF07679
GO:GO:0055072 eggNOG:NOG249790 HOGENOM:HOG000230686
HOVERGEN:HBG005455 EMBL:U61262 EMBL:U72391 EMBL:AC068397
EMBL:AC104420 EMBL:AC129980 EMBL:BC117161 EMBL:BC143270
IPI:IPI00023814 IPI:IPI00217291 IPI:IPI00472011
RefSeq:NP_001166094.1 RefSeq:NP_002490.2 UniGene:Hs.388613 PDB:1X5F
PDB:1X5G PDB:1X5H PDB:1X5I PDB:1X5J PDB:1X5K PDB:3P4L PDBsum:1X5F
PDBsum:1X5G PDBsum:1X5H PDBsum:1X5I PDBsum:1X5J PDBsum:1X5K
PDBsum:3P4L ProteinModelPortal:Q92859 SMR:Q92859 DIP:DIP-46272N
IntAct:Q92859 STRING:Q92859 PhosphoSite:Q92859 DMDM:116242676
PaxDb:Q92859 PRIDE:Q92859 Ensembl:ENST00000261908
Ensembl:ENST00000339362 Ensembl:ENST00000560262 GeneID:4756
KEGG:hsa:4756 UCSC:uc002avm.4 CTD:4756 GeneCards:GC15P073346
HGNC:HGNC:7754 HPA:CAB009320 HPA:HPA027804 HPA:HPA027805
HPA:HPA027806 MIM:601907 neXtProt:NX_Q92859 PharmGKB:PA31555
InParanoid:Q92859 KO:K06766 OMA:DWVIEPV OrthoDB:EOG4FR0QS
PhylomeDB:Q92859 ChiTaRS:NEO1 EvolutionaryTrace:Q92859
GenomeRNAi:4756 NextBio:18324 ArrayExpress:Q92859 Bgee:Q92859
CleanEx:HS_NEO1 Genevestigator:Q92859 GermOnline:ENSG00000067141
Uniprot:Q92859
Length = 1461
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 538 LPGPAPN-LRAYAASPTSITVTWETPVS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 591
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G + RT P P + ++ N
Sbjct: 592 HSYT----INGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDVPSAAPQNLSLEVRNS 647
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ +P+ + I GYK+R + + S +T++ G L I L G Y
Sbjct: 648 KSIMIHWQPPAPATQNGQITGYKIRYRKASRK-SDVTETLVS-GTQLSQLIEGLDRGTEY 705
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 706 NFRVAALTINGTG 718
Score = 150 (57.9 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 853 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 911
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 912 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKP 970
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 971 KTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1026
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1027 PYYFKIQARNSKGMGPMSE-AVQFR 1050
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 52/199 (26%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++ G++I+Y K + +S
Sbjct: 632 VPSAAPQNLSLEVRNSKSIMIHWQPPAPATQN--GQITGYKIRYRKASRKSDVTETLVSG 689
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 690 TQLS-QLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVP-SSLHV 747
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 748 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 799
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 800 DPSSHYVITLKAFNNVGEG 818
>WB|WBGene00006759 [details] [associations]
symbol:unc-22 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040015 "negative regulation of multicellular
organism growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0031672 "A band" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00041 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 SMART:SM00220 GO:GO:0005524
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF49265 SUPFAM:SSF56112 GO:GO:0004674 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0040011
GO:GO:0040018 GO:GO:0000003 GO:GO:0030163 GO:GO:0040015
InterPro:IPR013098 Pfam:PF07679 GO:GO:0040027 GO:GO:0031672
EMBL:Z73899 GeneTree:ENSGT00700000104350 EMBL:Z73897 EMBL:X15423
PIR:A88852 PIR:S57242 PIR:T27935 RefSeq:NP_001122835.2
RefSeq:NP_001255603.1 RefSeq:NP_001255604.1 RefSeq:NP_502273.2
RefSeq:NP_502274.2 PDB:1KOA PDB:1WIT PDB:1WIU PDB:3UTO PDBsum:1KOA
PDBsum:1WIT PDBsum:1WIU PDBsum:3UTO ProteinModelPortal:Q23551
STRING:Q23551 PaxDb:Q23551 PRIDE:Q23551 EnsemblMetazoa:ZK617.1b.1
EnsemblMetazoa:ZK617.1b.2 GeneID:178135 KEGG:cel:CELE_ZK617.1
UCSC:ZK617.1a.2 CTD:178135 WormBase:ZK617.1a WormBase:ZK617.1b
WormBase:ZK617.1c WormBase:ZK617.1d WormBase:ZK617.1e
InParanoid:Q23551 OMA:GCKLKWK EvolutionaryTrace:Q23551
NextBio:899860 ArrayExpress:Q23551 Uniprot:Q23551
Length = 7158
Score = 161 (61.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 52/201 (25%), Positives = 92/201 (45%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP G+++ +++ WNP R++ ++G+ ++ +++ + A +
Sbjct: 4634 PPGAPSTPEITGYDTNQVSLAWNPP---RDDGGSPILGYVVERFEKRGGGDWAPVKMPMV 4690
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP--PSAVHIKGINP 119
++ GL + Y +V A N AG G S T R +KP P A + I
Sbjct: 4691 KGTECIVPGLHENETYQFRVRAVNAAGHGEPSNGSEPVTCRPYVEKPGAPDAPRVGKITK 4750
Query: 120 TTVHVTWRYVSPSFEE-EPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGK 177
+ +TW P + PI GY V ++ D D +R ND PV +T ++ +L +
Sbjct: 4751 NSAELTWN--RPLRDGGAPIDGYIVEKKKLGDNDWTRCNDK--PVRDTA-FEVKNLGEKE 4805
Query: 178 RYHMRVLAFSNGGDGRMSSPA 198
Y RV+A ++ G+G S P+
Sbjct: 4806 EYEFRVIAVNSAGEGEPSKPS 4826
Score = 36 (17.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 196 SPAITFQMGEEK 207
+P +TF GE K
Sbjct: 5163 APKVTFSKGENK 5174
>UNIPROTKB|F1N199 [details] [associations]
symbol:Bt.110263 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0061364 "apoptotic process involved in luteolysis"
evidence=IEA] [GO:0050925 "negative regulation of negative
chemotaxis" evidence=IEA] [GO:0050772 "positive regulation of
axonogenesis" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030673 "axolemma" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001656 "metanephros development"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0007411
GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0030673
GO:GO:0050772 GO:GO:0032870 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007156 GO:GO:0001656 GO:GO:0001657 GO:GO:0050925
GO:GO:0061364 GeneTree:ENSGT00660000095158 EMBL:DAAA02000563
EMBL:DAAA02000564 EMBL:DAAA02000565 EMBL:DAAA02000566
EMBL:DAAA02000567 EMBL:DAAA02000568 EMBL:DAAA02000569
EMBL:DAAA02000570 IPI:IPI00999309 Ensembl:ENSBTAT00000048830
OMA:AKQTWHI Uniprot:F1N199
Length = 1343
Score = 152 (58.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 54/192 (28%), Positives = 87/192 (45%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRT--TRNWALIVGLQP 73
T + VTW ++ + I+G +R+ Y + + T + L T A++V L+
Sbjct: 526 TTVQVTWT-VDRQPQFIQG----YRVMYRQTSGLQATTAWQNLDAKVPTERSAVLVNLKK 580
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI---NPTTVHVTWRYVS 130
Y +KV Y N +G +SE RT +AP PP +V + + N T++ V+W
Sbjct: 581 GVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPP 640
Query: 131 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-----LSPGKRYHMRVLA 185
P + I YK+ W + N+T + T+DA I L PG +Y + V A
Sbjct: 641 PDHQNGIIQEYKI--WCL------GNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAA 692
Query: 186 FSNGGDGRMSSP 197
++ G G S P
Sbjct: 693 STSAGVGVKSEP 704
Score = 40 (19.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 194 MSSPAITFQMGEEKEFKSGS-PAL 216
+S+ A+TFQ G+ +GS P L
Sbjct: 766 LSNYAVTFQRGDGGLMSNGSRPGL 789
>UNIPROTKB|F1SI93 [details] [associations]
symbol:NEO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006355 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0004872 GO:GO:0007520 InterPro:IPR013098 Pfam:PF07679
GO:GO:0055072 GeneTree:ENSGT00680000099752 OMA:DWVIEPV
EMBL:CU076090 EMBL:CU856111 Ensembl:ENSSSCT00000002150
Uniprot:F1SI93
Length = 1123
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 52/196 (26%), Positives = 90/196 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E V S
Sbjct: 223 LPGPAPN-IRAYATSPTSITVTWETPLS---GN--GEIQNYKLYYMEKGTDKEQDVDVSS 276
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKA---PQKPPSAVHIKG 116
+ I GL+ T+Y +V+AYN G G ++ RT+ A P P + ++
Sbjct: 277 HSHT----ISGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTFSDACTVPSAAPQNLSLEV 332
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
N ++ + W+ P+ + I GYK+R + + S +T++ G L I L G
Sbjct: 333 RNSKSIVIHWQPPPPATQNGQITGYKIRYRKASRK-SDVTETLV-TGTQLSQLIEGLDRG 390
Query: 177 KRYHMRVLAFSNGGDG 192
Y+ RV A + G G
Sbjct: 391 TEYNFRVAALTINGTG 406
Score = 150 (57.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 525 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 583
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 584 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKP 642
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 643 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 698
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 699 PYYFKIQARNSKGMGPMSE-AVQFR 722
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/199 (25%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++ G++I+Y K + ++
Sbjct: 320 VPSAAPQNLSLEVRNSKSIVIHWQPPPPATQN--GQITGYKIRYRKASRKSDVTETLVTG 377
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 378 TQLS-QLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVP-SSLHV 435
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 436 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 487
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 488 DPSSHYVITLKAFNNVGEG 506
>MGI|MGI:1097159 [details] [associations]
symbol:Neo1 "neogenin" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007520
"myoblast fusion" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045296 "cadherin binding" evidence=IDA] [GO:0055072 "iron ion
homeostasis" evidence=ISO] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:1097159 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006355
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0004872 Reactome:REACT_127416 GO:GO:0007520
InterPro:IPR013098 Pfam:PF07679 GO:GO:0045296 eggNOG:NOG249790
HOGENOM:HOG000230686 HOVERGEN:HBG005455 OrthoDB:EOG4FR0QS
ChiTaRS:NEO1 EMBL:Y09535 IPI:IPI00129159 IPI:IPI00222049
IPI:IPI00222052 IPI:IPI00222053 IPI:IPI00222057 UniGene:Mm.42249
ProteinModelPortal:P97798 SMR:P97798 DIP:DIP-32026N IntAct:P97798
STRING:P97798 PhosphoSite:P97798 PaxDb:P97798 PRIDE:P97798
InParanoid:P97798 CleanEx:MM_NEO1 Genevestigator:P97798
GermOnline:ENSMUSG00000032340 Uniprot:P97798
Length = 1493
Score = 153 (58.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 50/193 (25%), Positives = 88/193 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P AP + + + T+I VTW P+ N G + +++ Y ++ +E + S
Sbjct: 569 LPGPAPN-IRAYATSPTSITVTWETPLS---GN--GEIQNYKLYYMEKGTDKEQDIDVSS 622
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+ I GL+ T+Y +V+AYN G G ++ RT P P + ++ N
Sbjct: 623 HSYT----INGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDVPSAAPQNLSLEVRNS 678
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
++ + W+ S + + I GYK+R + + S +T++ G L I L G Y
Sbjct: 679 KSIVIHWQPPSSTTQNGQITGYKIRYRKASRK-SDVTETLV-TGTQLSQLIEGLDRGTEY 736
Query: 180 HMRVLAFSNGGDG 192
+ RV A + G G
Sbjct: 737 NFRVAALTVNGTG 749
Score = 150 (57.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 884 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVR-WKTNIPANTKYKNANAT 942
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 943 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKP 1001
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 1002 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1057
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1058 PYYFKIQARNSKGMGPMSE-AVQFR 1081
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 51/199 (25%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P +N G++ G++I+Y K + ++
Sbjct: 663 VPSAAPQNLSLEVRNSKSIVIHWQPPSSTTQN--GQITGYKIRYRKASRKSDVTETLVTG 720
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T + LI GL T+Y +V A G GP ++ T+ + P+ P S++H+
Sbjct: 721 TQLS-QLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDETRVPEVP-SSLHV 778
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 779 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 830
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 831 DPSSHYVITLKAFNNVGEG 849
>UNIPROTKB|Q9HCK4 [details] [associations]
symbol:ROBO2 "Roundabout homolog 2" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0008046 "axon guidance receptor activity" evidence=ISS;NAS]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0050772 "positive regulation of axonogenesis" evidence=IDA]
[GO:0007156 "homophilic cell adhesion" evidence=IDA] [GO:0042802
"identical protein binding" evidence=IDA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0007420 "brain development"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001656 "metanephros development" evidence=ISS] [GO:0007411
"axon guidance" evidence=ISS;TAS] [GO:0030673 "axolemma"
evidence=ISS] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISS] [GO:0016199 "axon midline choice point recognition"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=IMP]
[GO:0050925 "negative regulation of negative chemotaxis"
evidence=IDA] [GO:0021891 "olfactory bulb interneuron development"
evidence=ISS] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051964 "negative regulation of synapse
assembly" evidence=ISS] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 Reactome:REACT_111045 GO:GO:0009986 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0016199 GO:GO:0030673 GO:GO:0042802 GO:GO:0050772
GO:GO:0032870 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0001656 GO:GO:0001657 GO:GO:0031290 GO:GO:0051964
GO:GO:0008046 eggNOG:NOG238978 HOGENOM:HOG000010267
HOVERGEN:HBG073476 GO:GO:0050925 GO:GO:0021891 EMBL:DQ533874
EMBL:AB046788 EMBL:DQ533873 EMBL:AC016942 EMBL:AC016952
EMBL:AC024256 EMBL:AC026877 EMBL:AC067717 EMBL:AC117514
EMBL:AC117515 EMBL:AC117516 EMBL:AC126467 EMBL:AC130004
EMBL:AC131005 EMBL:AC131154 EMBL:AC133040 EMBL:AC138974
EMBL:BC064374 EMBL:BC146772 EMBL:AF040991 IPI:IPI00385980
IPI:IPI00420043 IPI:IPI00900311 RefSeq:NP_001122401.1
RefSeq:NP_002933.1 UniGene:Hs.13305 PDB:1UEM PDB:1UJT PDB:2EDJ
PDBsum:1UEM PDBsum:1UJT PDBsum:2EDJ ProteinModelPortal:Q9HCK4
SMR:Q9HCK4 IntAct:Q9HCK4 MINT:MINT-1418118 STRING:Q9HCK4
PhosphoSite:Q9HCK4 DMDM:49036496 PaxDb:Q9HCK4 PRIDE:Q9HCK4
Ensembl:ENST00000461745 Ensembl:ENST00000487694 GeneID:6092
KEGG:hsa:6092 UCSC:uc003dpy.4 CTD:6092 GeneCards:GC03P075955
HGNC:HGNC:10250 HPA:HPA013371 MIM:602431 MIM:610878
neXtProt:NX_Q9HCK4 Orphanet:289365 PharmGKB:PA34621 KO:K06754
ChiTaRS:ROBO2 EvolutionaryTrace:Q9HCK4 GenomeRNAi:6092
NextBio:23691 ArrayExpress:Q9HCK4 Bgee:Q9HCK4 CleanEx:HS_ROBO2
Genevestigator:Q9HCK4 GO:GO:0061364 Uniprot:Q9HCK4
Length = 1378
Score = 151 (58.2 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 54/192 (28%), Positives = 88/192 (45%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRT--TRNWALIVGLQP 73
T + VTW ++ + I+G +R+ Y + + T+ + L T A++V L+
Sbjct: 650 TTVQVTWT-VDRQPQFIQG----YRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKK 704
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI---NPTTVHVTWRYVS 130
Y +KV Y N +G +SE RT +AP PP +V + + N T++ V+W
Sbjct: 705 GVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSYNSTSISVSWDPPP 764
Query: 131 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-----LSPGKRYHMRVLA 185
P + I YK+ W + N+T + T+DA I L PG +Y + V A
Sbjct: 765 PDHQNGIIQEYKI--WCL------GNETRFHINKTVDAAIRSVIIGGLFPGIQYRVEVAA 816
Query: 186 FSNGGDGRMSSP 197
++ G G S P
Sbjct: 817 STSAGVGVKSEP 828
Score = 40 (19.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 194 MSSPAITFQMGEEKEFKSGS-PAL 216
+S+ A+TFQ G+ +GS P L
Sbjct: 890 LSNYAVTFQRGDGGLMSNGSRPGL 913
>UNIPROTKB|F1N739 [details] [associations]
symbol:ROBO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0060763 "mammary duct terminal
end bud growth" evidence=IEA] [GO:0050925 "negative regulation of
negative chemotaxis" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0033600 "negative regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030673
"axolemma" evidence=IEA] [GO:0030275 "LRR domain binding"
evidence=IEA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002042 "cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 GO:GO:0007411 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0030673 GO:GO:0006919
GO:GO:0050772 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0033600 InterPro:IPR003596 SMART:SM00406 GO:GO:0060763
GO:GO:0070100 GO:GO:0002042 GO:GO:0021836 GO:GO:0050925
GO:GO:0035385 GeneTree:ENSGT00660000095158 EMBL:DAAA02000591
EMBL:DAAA02000592 EMBL:DAAA02000593 EMBL:DAAA02000594
EMBL:DAAA02000595 EMBL:DAAA02000596 EMBL:DAAA02000597
EMBL:DAAA02000598 EMBL:DAAA02000599 EMBL:DAAA02000600
EMBL:DAAA02000601 EMBL:DAAA02000602 EMBL:DAAA02000603
EMBL:DAAA02000604 EMBL:DAAA02000605 IPI:IPI00923840
Ensembl:ENSBTAT00000061264 OMA:NSDSNLT ArrayExpress:F1N739
Uniprot:F1N739
Length = 1683
Score = 150 (57.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 49/186 (26%), Positives = 82/186 (44%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S++I V W ++ + I+G + +R E V+ + T+N +I L+
Sbjct: 720 SSSSIEVHWT-VDQQSQYIQGYKVLYRPS-GANHGESEWLVFEVRTPTKNSVVIPDLKKG 777
Query: 75 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPS 132
Y +K + N +G +SE +T +AP PP +V + N T + V+W+
Sbjct: 778 VNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPED 837
Query: 133 FEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ + YKV W + + N T+ G+T I L PG RY + V A + G
Sbjct: 838 TQNGMVQEYKV--WCLGNETRYHINKTVD--GSTFSVVIPSLVPGIRYSVEVAASTGAGS 893
Query: 192 GRMSSP 197
G S P
Sbjct: 894 GVKSEP 899
Score = 43 (20.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P +T+Q G E G P L
Sbjct: 977 TPTVTYQRGGEAVSSGGRPGL 997
>ZFIN|ZDB-GENE-000209-4 [details] [associations]
symbol:robo3 "roundabout homolog 3" species:7955
"Danio rerio" [GO:0005515 "protein binding" evidence=IPI]
[GO:0016199 "axon midline choice point recognition" evidence=IMP]
[GO:0071679 "commissural neuron axon guidance" evidence=IMP]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0048675
"axon extension" evidence=IMP] [GO:0048264 "determination of
ventral identity" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI;IMP]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-000209-4 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0016199 GO:GO:0048264
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048676 GO:GO:0071679
HSSP:Q9HCK4 HOGENOM:HOG000010267 HOVERGEN:HBG073476 EMBL:AF304131
IPI:IPI00932530 UniGene:Dr.77473 ProteinModelPortal:Q98SW3
SMR:Q98SW3 STRING:Q98SW3 InParanoid:Q98SW3 ArrayExpress:Q98SW3
Uniprot:Q98SW3
Length = 1419
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 51/204 (25%), Positives = 96/204 (47%)
Query: 16 STAINVTWNPIELIRENIRG-RLIGHRIK-YWKEDNPEETAVYYLSRTTRNWALIVGLQP 73
++++ ++WN ++ + I+G RL+ + W + + T R+ A+I L
Sbjct: 683 ASSVKISWN-VDRQSQYIQGYRLLYRPVGGSWSQQEVK-------GATERS-AVIANLLK 733
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI---NPTTVHVTWRYVS 130
T+Y +K+ Y N +G +S RT + P PP AV++ + N +++ V+W+
Sbjct: 734 GTEYEIKIRPYFNEFQGLDSRSQTLRTPEEVPSAPPRAVNVATVKLSNSSSISVSWQPPP 793
Query: 131 PSFEEEPIIGYKVRVWEVDQD-MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 189
+ I YKV W + D +R N G+ L + L PG Y + V A ++
Sbjct: 794 TDMQNGVIQEYKV--WCLGNDSQTRYNINQTVDGSVLSTVLKGLLPGVLYQVEVAAVTSA 851
Query: 190 GDGRMSSP-AITFQMGEEKEFKSG 212
G G+ S P ++ ++ E+ +G
Sbjct: 852 GVGKHSQPVSVLIKLPAEQPTVTG 875
>UNIPROTKB|F1NW32 [details] [associations]
symbol:NEO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099752 EMBL:AADN02051048 EMBL:AADN02051049
EMBL:AADN02051050 EMBL:AADN02051051 IPI:IPI00579636
Ensembl:ENSGALT00000034761 Uniprot:F1NW32
Length = 1434
Score = 151 (58.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 829 PMMPPVGVQASILSHDTIRITWADNSLPKNQKITDARYYTVR-WKTNIPANTKYKTANAT 887
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 888 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKP 946
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 947 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1002
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1003 PYYFKIQARNSKGMGPMSE-AVQFR 1026
Score = 149 (57.5 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 51/196 (26%), Positives = 90/196 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWK--EDNPEETAVYY 57
+P AP + + + T++ V W P+ N G + +++ Y + +D+ ++ V
Sbjct: 515 LPGPAPN-IRAYAGSPTSVTVMWETPLS---GN--GEIQNYKLYYMEKGQDSEQDVDVAG 568
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
LS T I GL+ T+Y +V+AYN G G ++ + RT P P + ++
Sbjct: 569 LSYT------ITGLKKYTEYSFRVVAYNKHGPGVSTQDVVVRTLSDVPSAAPQNLTLEAR 622
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPG 176
N ++ + W+ I GYK+R +V SR +D VG T +++ L G
Sbjct: 623 NSKSIMLHWQPPPAGTHSGQITGYKIRYRKV----SRKSDVTESVGGTQLFQLIEGLERG 678
Query: 177 KRYHMRVLAFSNGGDG 192
Y+ R+ A + G G
Sbjct: 679 TEYNFRIAAMTVNGTG 694
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 56/191 (29%), Positives = 82/191 (42%)
Query: 5 APQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 63
AP+ V + ++ I +TW P+ + +G + + I Y KE E V SR
Sbjct: 418 APRDVVATLVSTRFIRLTWRTPVS----DPQGDNLTYSIFYTKEGINRER-VENTSRPGE 472
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTT 121
+I L P+T Y +V+A N G G ES L+ + Q P A +I+ +PT+
Sbjct: 473 TQVMIQNLMPETVYVFRVVAQNKHGHG-ESSAPLKVATQPEVQLPGPAPNIRAYAGSPTS 531
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V V W +P I YK+ E QD + D G L I L Y
Sbjct: 532 VTVMWE--TPLSGNGEIQNYKLYYMEKGQDSEQDVDV---AG--LSYTITGLKKYTEYSF 584
Query: 182 RVLAFSNGGDG 192
RV+A++ G G
Sbjct: 585 RVVAYNKHGPG 595
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P + G++ G++I+Y K + V
Sbjct: 609 VPSAAPQNLTLEARNSKSIMLHWQPPPAGTHS--GQITGYKIRYRKVSRKSD--VTESVG 664
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T+ + LI GL+ T+Y ++ A G GP ++ T+ + P+ P S++H+
Sbjct: 665 GTQLFQLIEGLERGTEYNFRIAAMTVNGTGPATDWVSAETFESDLDESRVPEVP-SSLHV 723
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 724 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 775
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 776 DPSSHYVITLKAFNNVGEG 794
>UNIPROTKB|F1NGZ4 [details] [associations]
symbol:NEO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007520 "myoblast fusion" evidence=IEA] [GO:0045296 "cadherin
binding" evidence=IEA] [GO:0055072 "iron ion homeostasis"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0006355 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0004872
InterPro:IPR013098 Pfam:PF07679 GO:GO:0055072
GeneTree:ENSGT00680000099752 IPI:IPI00819005 OMA:DWVIEPV
EMBL:AADN02051048 EMBL:AADN02051049 EMBL:AADN02051050
EMBL:AADN02051051 Ensembl:ENSGALT00000002727 Uniprot:F1NGZ4
Length = 1444
Score = 151 (58.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 56/205 (27%), Positives = 90/205 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + + I +TW L + + ++ WK + P T + T
Sbjct: 839 PMMPPVGVQASILSHDTIRITWADNSLPKNQKITDARYYTVR-WKTNIPANTKYKTANAT 897
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T ++ L+ GL+P+T Y VM S T+ P PP V + K P
Sbjct: 898 TLSY-LVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKP 956
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-PV-GNTLDADIVDLSPGK 177
T+ V W+ PS I GY + + D + + +D +I PV GN L I +L+
Sbjct: 957 RTIIVNWQ--PPSEANGKITGYII-YYSTDVN-AEIHDWVIEPVVGNRLTHQIQELTLDT 1012
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ ++ A ++ G G MS A+ F+
Sbjct: 1013 PYYFKIQARNSKGMGPMSE-AVQFR 1036
Score = 149 (57.5 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 51/196 (26%), Positives = 90/196 (45%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWK--EDNPEETAVYY 57
+P AP + + + T++ V W P+ N G + +++ Y + +D+ ++ V
Sbjct: 525 LPGPAPN-IRAYAGSPTSVTVMWETPLS---GN--GEIQNYKLYYMEKGQDSEQDVDVAG 578
Query: 58 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
LS T I GL+ T+Y +V+AYN G G ++ + RT P P + ++
Sbjct: 579 LSYT------ITGLKKYTEYSFRVVAYNKHGPGVSTQDVVVRTLSDVPSAAPQNLTLEAR 632
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPG 176
N ++ + W+ I GYK+R +V SR +D VG T +++ L G
Sbjct: 633 NSKSIMLHWQPPPAGTHSGQITGYKIRYRKV----SRKSDVTESVGGTQLFQLIEGLERG 688
Query: 177 KRYHMRVLAFSNGGDG 192
Y+ R+ A + G G
Sbjct: 689 TEYNFRIAAMTVNGTG 704
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 56/191 (29%), Positives = 82/191 (42%)
Query: 5 APQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 63
AP+ V + ++ I +TW P+ + +G + + I Y KE E V SR
Sbjct: 428 APRDVVATLVSTRFIRLTWRTPVS----DPQGDNLTYSIFYTKEGINRER-VENTSRPGE 482
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTT 121
+I L P+T Y +V+A N G G ES L+ + Q P A +I+ +PT+
Sbjct: 483 TQVMIQNLMPETVYVFRVVAQNKHGHG-ESSAPLKVATQPEVQLPGPAPNIRAYAGSPTS 541
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V V W +P I YK+ E QD + D G L I L Y
Sbjct: 542 VTVMWE--TPLSGNGEIQNYKLYYMEKGQDSEQDVDV---AG--LSYTITGLKKYTEYSF 594
Query: 182 RVLAFSNGGDG 192
RV+A++ G G
Sbjct: 595 RVVAYNKHGPG 605
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P APQ + NS +I + W P + G++ G++I+Y K + V
Sbjct: 619 VPSAAPQNLTLEARNSKSIMLHWQPPPAGTHS--GQITGYKIRYRKVSRKSD--VTESVG 674
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR------KAPQKPPSAVHI 114
T+ + LI GL+ T+Y ++ A G GP ++ T+ + P+ P S++H+
Sbjct: 675 GTQLFQLIEGLERGTEYNFRIAAMTVNGTGPATDWVSAETFESDLDESRVPEVP-SSLHV 733
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG-NTLDADIVDL 173
+ + T++ V+W +P E + I+ VR + + + + I V I +L
Sbjct: 734 RPL-VTSIVVSW---TPP-ENQNIV---VRGYAIGYGIGSPHAQTIKVDYKQRYYTIENL 785
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 786 DPSSHYVITLKAFNNVGEG 804
>RGD|620167 [details] [associations]
symbol:Robo2 "roundabout homolog 2 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001656 "metanephros development"
evidence=ISO] [GO:0001657 "ureteric bud development" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO;IDA] [GO:0007420 "brain
development" evidence=IEP] [GO:0008046 "axon guidance receptor
activity" evidence=IDA] [GO:0016199 "axon midline choice point
recognition" evidence=ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021891 "olfactory bulb interneuron development"
evidence=ISO] [GO:0030673 "axolemma" evidence=ISO] [GO:0031290
"retinal ganglion cell axon guidance" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=ISO]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:620167 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0016199 GO:GO:0042802
GO:GO:0048814 GO:GO:0050772 GO:GO:0021510 InterPro:IPR013098
Pfam:PF07679 GO:GO:0007156 GO:GO:0001656 GO:GO:0001657
GO:GO:0031290 GO:GO:0008046 HSSP:Q9HCK4 HOVERGEN:HBG073476
GO:GO:0021891 CTD:6092 KO:K06754 EMBL:AF182037 IPI:IPI00948084
RefSeq:NP_115289.1 UniGene:Rn.214590 UniGene:Rn.24350
ProteinModelPortal:Q9QZI3 STRING:Q9QZI3 PRIDE:Q9QZI3 GeneID:84409
KEGG:rno:84409 UCSC:RGD:620167 NextBio:616878 ArrayExpress:Q9QZI3
Genevestigator:Q9QZI3 Uniprot:Q9QZI3
Length = 1060
Score = 148 (57.2 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 53/192 (27%), Positives = 90/192 (46%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRT--TRNWALIVGLQP 73
T + VTW ++ + I+G +R+ Y + + + V+ L T A++V L+
Sbjct: 652 TTVQVTWT-VDRQPQFIQG----YRVMYRQTSGLQASTVWQNLDAKVPTERSAVLVNLKK 706
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI---NPTTVHVTWRYVS 130
Y +KV Y N +G +SE RT +AP PP +V + + N T++ V+W
Sbjct: 707 GVTYEIKVRPYFNEFQGMDSESKTIRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWD-PP 765
Query: 131 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-----LSPGKRYHMRVLA 185
P+ + II + ++W + N+T + T+DA I L PG +Y + V A
Sbjct: 766 PADHQNGII-QEYKIWCL------GNETRFHINKTVDATIRSVVIGGLFPGIQYRVEVAA 818
Query: 186 FSNGGDGRMSSP 197
++ G G S P
Sbjct: 819 STSAGVGVKSEP 830
Score = 40 (19.1 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 194 MSSPAITFQMGEEKEFKSGS-PAL 216
+S+ A+TFQ G+ +GS P L
Sbjct: 892 LSNYAVTFQRGDGGLMSNGSRPGL 915
>MGI|MGI:2150309 [details] [associations]
symbol:Dscaml1 "Down syndrome cell adhesion molecule like 1"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=ISO;ISA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IMP] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007420 "brain development"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016338 "calcium-independent cell-cell adhesion"
evidence=ISA] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISO] [GO:0070593 "dendrite self-avoidance" evidence=IMP]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:2150309 GO:GO:0016021
GO:GO:0005886 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 eggNOG:NOG12793
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0007156
GO:GO:0016338 EMBL:AC126804 HOVERGEN:HBG051409 GO:GO:0070593
HOGENOM:HOG000112277 OrthoDB:EOG40GCPX EMBL:AC119237 EMBL:AC159893
EMBL:AC174644 EMBL:BC096527 IPI:IPI00762484 UniGene:Mm.325499
ProteinModelPortal:Q4VA61 SMR:Q4VA61 STRING:Q4VA61 PaxDb:Q4VA61
PRIDE:Q4VA61 UCSC:uc009pfz.1 InParanoid:Q4VA61 Bgee:Q4VA61
Genevestigator:Q4VA61 Uniprot:Q4VA61
Length = 2053
Score = 152 (58.6 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 59/221 (26%), Positives = 92/221 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--S 59
P P V + S +I VTW + +N G + G++I Y +E++P Y +
Sbjct: 986 PDGPPMDVTLQPVTSQSIQVTWKAPKKELQN--GVIRGYQIGY-RENSPGSNGQYSIVEM 1042
Query: 60 RTTRNWALIV--GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ T + + L+ +Y V V A+N AG GP S T P +PP V I
Sbjct: 1043 KATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSI 1102
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLD-ADIVDLS 174
++W S + GY+V W VD + + V T + ++ +
Sbjct: 1103 TSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQN----VTTTRERVELRGME 1158
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLA++ GDG SS + Q KE G PA
Sbjct: 1159 KFTNYSVQVLAYTQAGDGVRSS-VLYIQT---KEDVPGPPA 1195
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T N A IV L P + Y +++ ++N G S+ T AP PP V ++ + +
Sbjct: 943 TINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQS 1002
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR--- 178
+ VTW+ + I GY++ E + S +I+ + T D+++ L K+
Sbjct: 1003 IQVTWKAPKKELQNGVIRGYQIGYRE-NSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 1061
Query: 179 YHMRVLAFSNGGDGRMSS 196
Y + V AF+ G G SS
Sbjct: 1062 YGVVVQAFNRAGTGPSSS 1079
>RGD|1304887 [details] [associations]
symbol:Dscaml1 "Down syndrome cell adhesion molecule-like 1"
species:10116 "Rattus norvegicus" [GO:0007156 "homophilic cell
adhesion" evidence=IEA;ISO] [GO:0007162 "negative regulation of
cell adhesion" evidence=IEA;ISO] [GO:0007420 "brain development"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0042803 "protein homodimerization activity" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0070593 "dendrite self-avoidance"
evidence=IEA;ISO] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1304887 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 InterPro:IPR013098
Pfam:PF07679 GO:GO:0048704 GO:GO:0007156 EMBL:CH473975
GO:GO:0070593 GeneTree:ENSGT00690000101869 CTD:57453 KO:K06768
OrthoDB:EOG40GCPX IPI:IPI00369575 RefSeq:NP_001101611.1
UniGene:Rn.100124 Ensembl:ENSRNOT00000022476 GeneID:315615
KEGG:rno:315615 UCSC:RGD:1304887 NextBio:669526 Uniprot:D3ZPL7
Length = 2111
Score = 152 (58.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 59/221 (26%), Positives = 92/221 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--S 59
P P V + S +I VTW + +N G + G++I Y +E++P Y +
Sbjct: 1044 PDGPPMDVTLQPVTSQSIQVTWKAPKKELQN--GIIRGYQIGY-RENSPGSNGQYSIVEM 1100
Query: 60 RTTRNWALIV--GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ T + + L+ +Y V V A+N AG GP S T P +PP V I
Sbjct: 1101 KATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSI 1160
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLD-ADIVDLS 174
++W S + GY+V W VD + + V T + ++ +
Sbjct: 1161 TSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQN----VTTTRERVELRGME 1216
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLA++ GDG SS + Q KE G PA
Sbjct: 1217 KFTNYSVQVLAYTQAGDGVRSS-VLYIQT---KEDVPGPPA 1253
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T N A IV L P + Y +++ ++N G S+ T AP PP V ++ + +
Sbjct: 1001 TINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQS 1060
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR--- 178
+ VTW+ + I GY++ E + S +I+ + T D+++ L K+
Sbjct: 1061 IQVTWKAPKKELQNGIIRGYQIGYRE-NSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 1119
Query: 179 YHMRVLAFSNGGDGRMSS 196
Y + V AF+ G G SS
Sbjct: 1120 YGVVVQAFNRAGTGPSSS 1137
>UNIPROTKB|Q8UVD7 [details] [associations]
symbol:robo1 "Roundabout-1" species:8355 "Xenopus laevis"
[GO:0007411 "axon guidance" evidence=IMP] [GO:0030182 "neuron
differentiation" evidence=IMP] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098
Pfam:PF07679 HSSP:Q9HCK4 CTD:6091 HOVERGEN:HBG073476 KO:K06753
EMBL:AF461119 RefSeq:NP_001084250.1 UniGene:Xl.4819
ProteinModelPortal:Q8UVD7 SMR:Q8UVD7 PRIDE:Q8UVD7 GeneID:399392
KEGG:xla:399392 Xenbase:XB-GENE-948813 Uniprot:Q8UVD7
Length = 1614
Score = 151 (58.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 53/188 (28%), Positives = 87/188 (46%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA--VYYLSRTTRNWALIVGLQ 72
+S++I V W ++ + I+G I R +N E+A ++ + +N A+I L+
Sbjct: 650 SSSSIEVHWT-VDQQSQYIQGYKILFRPS---SENRGESAWSIFEVRTPAKNSAVIPELR 705
Query: 73 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI-KGI-NPTTVHVTWRYVS 130
Y +K + N +G +SE +T +AP PP +V + K N T + V W+
Sbjct: 706 KGVNYEIKARPFFNEFQGADSEVRFAKTMEEAPSAPPQSVTVTKNDGNGTAIVVAWQPPP 765
Query: 131 PSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 189
+ + YKV W + ++ N T+ G+TL I L PG RY + V A +
Sbjct: 766 EDTQNGMVQEYKV--WCLGNESRYHINKTVD--GSTLSVVIPSLVPGIRYSVEVAASTGA 821
Query: 190 GDGRMSSP 197
G G S P
Sbjct: 822 GSGVKSEP 829
Score = 39 (18.8 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P + +Q G E +G P L
Sbjct: 907 TPTVAYQRGGEAVSSAGRPGL 927
>UNIPROTKB|F1Q2N4 [details] [associations]
symbol:ROBO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR003596 SMART:SM00406
GeneTree:ENSGT00660000095158 OMA:NSDSNLT EMBL:AAEX03016426
EMBL:AAEX03016427 EMBL:AAEX03016428 EMBL:AAEX03016429
Ensembl:ENSCAFT00000012668 Uniprot:F1Q2N4
Length = 1622
Score = 148 (57.2 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S++I V W ++ + I+G I +R E V+ + T+N +I L+
Sbjct: 662 SSSSIEVHWT-VDQQSQYIQGYKILYRPSGGNHGE-SEWLVFEVRTPTKNSVVIPDLKKG 719
Query: 75 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPS 132
Y +K + N +G +SE +T +AP PP +V + N T + V+W+
Sbjct: 720 VNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPED 779
Query: 133 FEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ + YKV W + + N T+ G+T I L PG RY + V A + G
Sbjct: 780 TQNGMVQEYKV--WCLGNETRYHINKTVD--GSTFSVVIPSLVPGIRYSVEVAASTGAGA 835
Query: 192 GRMSSP 197
G S P
Sbjct: 836 GVKSEP 841
Score = 43 (20.2 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P +T+Q G E G P L
Sbjct: 919 TPTVTYQRGGEAVSSGGRPGL 939
>UNIPROTKB|F1N4K6 [details] [associations]
symbol:DSCAML1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070593 "dendrite self-avoidance" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0007162 "negative regulation of cell
adhesion" evidence=IEA] [GO:0007156 "homophilic cell adhesion"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0009986
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007162 InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704
GO:GO:0007156 GO:GO:0070593 GeneTree:ENSGT00690000101869
OMA:IVICILR EMBL:DAAA02040390 EMBL:DAAA02040391 EMBL:DAAA02040392
IPI:IPI00704816 Ensembl:ENSBTAT00000030167 Uniprot:F1N4K6
Length = 1886
Score = 151 (58.2 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--S 59
P P V + S +I VTW + +N G + G++I Y +E++P Y +
Sbjct: 819 PDGPPMDVTLQPVTSQSIQVTWKAPKKELQN--GVIRGYQIGY-RENSPGSNGQYSIVEM 875
Query: 60 RTTRNWALIV--GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ T + + L+ +Y V V A+N AG GP S T P +PP V I
Sbjct: 876 KATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSI 935
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLD-ADIVDLS 174
++W S + GY+V W VD + + + T + ++ +
Sbjct: 936 TSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQN----ITTTRERVELRGME 991
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLA++ GDG SS + Q KE G PA
Sbjct: 992 KFTNYSVQVLAYTQAGDGVRSS-VLYIQT---KEDVPGPPA 1028
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T N A IV L P + Y +++ ++N G S+ T AP PP V ++ + +
Sbjct: 776 TINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQS 835
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR--- 178
+ VTW+ + I GY++ E + S +I+ + T D+++ L K+
Sbjct: 836 IQVTWKAPKKELQNGVIRGYQIGYRE-NSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 894
Query: 179 YHMRVLAFSNGGDGRMSS 196
Y + V AF+ G G SS
Sbjct: 895 YGVVVQAFNRAGTGPSSS 912
>UNIPROTKB|Q8TD84 [details] [associations]
symbol:DSCAML1 "Down syndrome cell adhesion molecule-like
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007162 "negative regulation of cell
adhesion" evidence=IEA] [GO:0070593 "dendrite self-avoidance"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=NAS] [GO:0009986
"cell surface" evidence=IDA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=NAS] [GO:0007420 "brain development"
evidence=IDA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IDA] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0007156 "homophilic cell adhesion" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0001709 "cell fate determination" evidence=NAS] [GO:0005886
"plasma membrane" evidence=TAS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AF334384 GO:GO:0016021 GO:GO:0005886
GO:GO:0042803 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 Reactome:REACT_111155
GO:GO:0007409 GO:GO:0007162 eggNOG:NOG12793 GO:GO:0009953
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0007156
GO:GO:0001709 HOVERGEN:HBG051409 GO:GO:0070593 HOGENOM:HOG000112277
EMBL:AF491813 EMBL:AF304304 EMBL:AF304305 EMBL:AB032958
EMBL:AP000711 EMBL:AP000757 EMBL:AP001554 EMBL:AP002342
IPI:IPI00154755 IPI:IPI00978116 RefSeq:NP_065744.2
UniGene:Hs.659513 PDB:1VA9 PDBsum:1VA9 ProteinModelPortal:Q8TD84
SMR:Q8TD84 IntAct:Q8TD84 STRING:Q8TD84 DMDM:73620825 PaxDb:Q8TD84
PRIDE:Q8TD84 Ensembl:ENST00000321322 GeneID:57453 KEGG:hsa:57453
UCSC:uc001prh.1 CTD:57453 GeneCards:GC11M117332 HGNC:HGNC:14656
HPA:CAB025540 MIM:611782 neXtProt:NX_Q8TD84 PharmGKB:PA38384
InParanoid:Q8TD84 KO:K06768 OrthoDB:EOG40GCPX ChiTaRS:DSCAML1
EvolutionaryTrace:Q8TD84 GenomeRNAi:57453 NextBio:63628
ArrayExpress:Q8TD84 Bgee:Q8TD84 CleanEx:HS_DSCAML1
Genevestigator:Q8TD84 GermOnline:ENSG00000177103 Uniprot:Q8TD84
Length = 2053
Score = 151 (58.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 58/221 (26%), Positives = 92/221 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--S 59
P P V + S +I VTW + +N G + G++I Y +E++P Y +
Sbjct: 986 PDGPPMDVTLQPVTSQSIQVTWKAPKKELQN--GVIRGYQIGY-RENSPGSNGQYSIVEM 1042
Query: 60 RTTRNWALIV--GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ T + + L+ +Y V V A+N AG GP S T P +PP V I
Sbjct: 1043 KATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSI 1102
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLD-ADIVDLS 174
++W S + GY+V W VD + + + T + ++ +
Sbjct: 1103 TSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQN----ITTTRERVELRGME 1158
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLA++ GDG SS + Q KE G PA
Sbjct: 1159 KFTNYSVQVLAYTQAGDGVRSS-VLYIQT---KEDVPGPPA 1195
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T N A IV L P + Y +++ ++N G S+ T AP PP V ++ + +
Sbjct: 943 TINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQS 1002
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR--- 178
+ VTW+ + I GY++ E + S +I+ + T D+++ L K+
Sbjct: 1003 IQVTWKAPKKELQNGVIRGYQIGYRE-NSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 1061
Query: 179 YHMRVLAFSNGGDGRMSS 196
Y + V AF+ G G SS
Sbjct: 1062 YGVVVQAFNRAGTGPSSS 1079
>UNIPROTKB|E1BZF3 [details] [associations]
symbol:E1BZF3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0007162 "negative regulation of cell adhesion"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0070593 "dendrite
self-avoidance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007162 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GeneTree:ENSGT00690000101869 OMA:IVICILR EMBL:AADN02058061
EMBL:AADN02058062 EMBL:AADN02058063 EMBL:AADN02058064
EMBL:AADN02058065 EMBL:AADN02058066 EMBL:AADN02058067
IPI:IPI00573997 ProteinModelPortal:E1BZF3
Ensembl:ENSGALT00000025989 Uniprot:E1BZF3
Length = 1870
Score = 150 (57.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 57/218 (26%), Positives = 88/218 (40%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL--S 59
P P V + S +I VTW + +N G + G++I Y +E++P Y +
Sbjct: 991 PDGPPMDVTLQPMTSQSIQVTWKAPKKELQN--GVIRGYQIGY-RENSPGSNGQYSIVEM 1047
Query: 60 RTTRNWALIV--GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 117
+ T + + L+ +Y V V A+N AG GP S T P +PP V I
Sbjct: 1048 KATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRAISI 1107
Query: 118 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 177
++W S + GY+V W + D I ++ +
Sbjct: 1108 TSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQNITTTRER-VELRGMEKFT 1166
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
Y ++VLA++ GDG SS + Q KE G PA
Sbjct: 1167 NYSVQVLAYTQAGDGVRSS-VLYIQT---KEDIPGPPA 1200
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/138 (27%), Positives = 64/138 (46%)
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T N A IV L P + Y +++ ++N G S+ T AP PP V ++ + +
Sbjct: 948 TINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQS 1007
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR--- 178
+ VTW+ + I GY++ E + S +I+ + T D+++ L K+
Sbjct: 1008 IQVTWKAPKKELQNGVIRGYQIGYRE-NSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQ 1066
Query: 179 YHMRVLAFSNGGDGRMSS 196
Y + V AF+ G G SS
Sbjct: 1067 YGVVVQAFNRAGTGPSSS 1084
>ZFIN|ZDB-GENE-050310-7 [details] [associations]
symbol:dscama "Down syndrome cell adhesion molecule
a" species:7955 "Danio rerio" [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0042074 "cell migration involved in
gastrulation" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
ZFIN:ZDB-GENE-050310-7 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 eggNOG:NOG12793 InterPro:IPR013098
Pfam:PF07679 GO:GO:0042074 HOVERGEN:HBG051409 KO:K06767
OrthoDB:EOG4J9MXZ GeneTree:ENSGT00690000101869 HOGENOM:HOG000112277
EMBL:BX248386 EMBL:CABZ01051870 EMBL:CABZ01051871 EMBL:CABZ01051872
EMBL:CABZ01051873 EMBL:CABZ01051874 EMBL:CR848005 EMBL:AY552547
IPI:IPI00501717 RefSeq:NP_001025395.1 UniGene:Dr.84606 SMR:Q53CM6
Ensembl:ENSDART00000125045 GeneID:568643 KEGG:dre:568643 CTD:568643
NextBio:20889266 Uniprot:Q53CM6
Length = 2024
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/203 (26%), Positives = 95/203 (46%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ V + + +I+++W RE + G L G RI YW + P+ +
Sbjct: 1095 VPSRAPEKVVATAASPESISLSWQTPA--REALNGVLQGFRIIYWA-NLPDGELGEIRNV 1151
Query: 61 TTRNWAL-IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT L + GL+ T Y ++V+A+ AG+G S++ RT P PP V +
Sbjct: 1152 TTHKAPLELEGLEKYTNYSIQVLAFTRAGDGVRSDQIYIRTKEDVPG-PPGGVKAAAASS 1210
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ V+V+W P + +I K V+ + ++ + L + +LS ++Y
Sbjct: 1211 SVVYVSWL---PPLKLNGVIR-KYTVFCSSTSPTVVSEFEVAPDEFLHR-VHNLSRNRKY 1265
Query: 180 HMRVLAFSNGGDGRMSSPAITFQ 202
++ V+A + G G SS IT +
Sbjct: 1266 NIWVMAVTAAGRGN-SSDVITVE 1287
Score = 143 (55.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 46/196 (23%), Positives = 82/196 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWN-PIELIREN-IRGRLIGHRIKYWKEDNPEETAVYYLS 59
P+ PQ V S +I VTW P++ ++ IRG + HR + + +
Sbjct: 992 PEGPPQDVTLEAITSQSIKVTWKAPLKHLQNGVIRGYQVCHREH--STNGSHQFVCISVE 1049
Query: 60 RTTRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
T +L + L+ +Y V V A N+AG GP S T P + P V +
Sbjct: 1050 ATGETESLSLNNLKKFAEYEVVVQASNSAGPGPASSEVRATTMEDVPSRAPEKVVATAAS 1109
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPG 176
P ++ ++W+ + + G+++ W D ++ + + ++ L
Sbjct: 1110 PESISLSWQTPAREALNGVLQGFRIIYWANLPDGELGEIRNVTT---HKAPLELEGLEKY 1166
Query: 177 KRYHMRVLAFSNGGDG 192
Y ++VLAF+ GDG
Sbjct: 1167 TNYSIQVLAFTRAGDG 1182
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 35/137 (25%), Positives = 58/137 (42%)
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T N A I+ L P + Y +++ A N+ G+ S T P+ PP V ++ I +
Sbjct: 949 TLNQATIIELHPSSTYNIRMFAKNHIGDSEPSNELTVTTDEADPEGPPQDVTLEAITSQS 1008
Query: 122 VHVTWRYVSPSFEEEPIIGYKV--RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+ VTW+ + I GY+V R + ++ G T + +L Y
Sbjct: 1009 IKVTWKAPLKHLQNGVIRGYQVCHREHSTNGSHQFVCISVEATGETESLSLNNLKKFAEY 1068
Query: 180 HMRVLAFSNGGDGRMSS 196
+ V A ++ G G SS
Sbjct: 1069 EVVVQASNSAGPGPASS 1085
Score = 38 (18.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 215
R H V + D R+ +P + + +E + S SP+
Sbjct: 1767 RPHPPVSVHTLSTDWRLGTPRVAGSVDKESDSYSVSPS 1804
>MGI|MGI:1890110 [details] [associations]
symbol:Robo2 "roundabout homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0001656 "metanephros development"
evidence=IMP] [GO:0001657 "ureteric bud development"
evidence=ISO;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006935 "chemotaxis" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO;IMP]
[GO:0008046 "axon guidance receptor activity" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016199 "axon midline choice point recognition" evidence=IGI]
[GO:0021891 "olfactory bulb interneuron development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030673
"axolemma" evidence=IDA] [GO:0031290 "retinal ganglion cell axon
guidance" evidence=IMP] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0050772 "positive regulation of axonogenesis"
evidence=ISO] [GO:0050925 "negative regulation of negative
chemotaxis" evidence=ISO] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1890110 GO:GO:0016021 GO:GO:0009986 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0016199 GO:GO:0030673 Reactome:REACT_127416 GO:GO:0042802
GO:GO:0050772 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0001656 GO:GO:0001657 GO:GO:0031290 eggNOG:NOG238978
HOGENOM:HOG000010267 HOVERGEN:HBG073476 GO:GO:0021891 ChiTaRS:ROBO2
EMBL:BC055333 EMBL:AK129396 IPI:IPI00420290 IPI:IPI00420291
UniGene:Mm.171736 ProteinModelPortal:Q7TPD3 SMR:Q7TPD3
IntAct:Q7TPD3 STRING:Q7TPD3 PhosphoSite:Q7TPD3 PaxDb:Q7TPD3
PRIDE:Q7TPD3 UCSC:uc007zrj.1 CleanEx:MM_ROBO2 Genevestigator:Q7TPD3
Uniprot:Q7TPD3
Length = 1470
Score = 148 (57.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 53/192 (27%), Positives = 90/192 (46%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRT--TRNWALIVGLQP 73
T + VTW ++ + I+G +R+ Y + + + V+ L T A++V L+
Sbjct: 654 TTVQVTWT-VDRQPQFIQG----YRVMYRQTSGLQASTVWQNLDAKVPTERSAVLVNLKK 708
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI---NPTTVHVTWRYVS 130
Y +KV Y N +G +SE RT +AP PP +V + + N T++ V+W
Sbjct: 709 GVTYEIKVRPYFNEFQGMDSESKTVRTTEEAPSAPPQSVTVLTVGSHNSTSISVSWD-PP 767
Query: 131 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-----LSPGKRYHMRVLA 185
P+ + II + ++W + N+T + T+DA I L PG +Y + V A
Sbjct: 768 PADHQNGII-QEYKIWCL------GNETRFHINKTVDAAIRSVVIGGLFPGIQYRVEVAA 820
Query: 186 FSNGGDGRMSSP 197
++ G G S P
Sbjct: 821 STSAGVGVKSEP 832
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 194 MSSPAITFQMGEEKEFKSGS-PAL 216
+S+ A+TFQ G+ +GS P L
Sbjct: 894 LSNYAVTFQRGDGGLMSNGSRPGL 917
>MGI|MGI:1858497 [details] [associations]
symbol:Igdcc4 "immunoglobulin superfamily, DCC subclass,
member 4" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1858497 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013098 Pfam:PF07679 HSSP:Q92859
GeneTree:ENSGT00680000099868 CTD:57722 eggNOG:NOG316920
HOGENOM:HOG000113009 OrthoDB:EOG45HRWQ EMBL:AF176694 EMBL:AB052620
EMBL:AB052621 EMBL:AK122535 IPI:IPI00111497 IPI:IPI00330129
IPI:IPI00856438 RefSeq:NP_064427.2 UniGene:Mm.209041
ProteinModelPortal:Q9EQS9 SMR:Q9EQS9 STRING:Q9EQS9
PhosphoSite:Q9EQS9 PRIDE:Q9EQS9 DNASU:56741
Ensembl:ENSMUST00000035499 GeneID:56741 KEGG:mmu:56741
UCSC:uc009qct.1 UCSC:uc009qcu.1 InParanoid:Q9EQS9 NextBio:313240
Bgee:Q9EQS9 CleanEx:MM_NOPE Genevestigator:Q9EQS9 Uniprot:Q9EQS9
Length = 1252
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 47/188 (25%), Positives = 74/188 (39%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
AP V + +S+++ V W EL E I IG + Y K + +
Sbjct: 430 APTRVTATPLSSSSVLVAWERPELHSEQI----IGFSLHYQKARGVDNVEYQFAVNNDTT 485
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
+ L+P+T Y V+AY+ G S L T P P + NP+ + V
Sbjct: 486 ELQVRDLEPNTDYEFYVVAYSQLGASRTSSPALVHTLDDVPSAAPQLT-LSSPNPSDIRV 544
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 184
W + S ++ YK+ +D + T +P GN + L P K Y +R+
Sbjct: 545 AWLPLPSSLSNGQVLKYKIEYGLGKED--QVFSTEVP-GNETQLTLNSLQPNKVYRVRIS 601
Query: 185 AFSNGGDG 192
A + G G
Sbjct: 602 AGTGAGYG 609
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 51/204 (25%), Positives = 81/204 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P V + +ST+I + W + I + R W N YY S
Sbjct: 748 PPLPPAHVHAESNSSTSIWLRWKKPDFTTVKIVNYTV--RFGPWGLRNAS-LVTYYTS-- 802
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ LI GL+P TKY V ++ +GP T P PPS + + + P+T
Sbjct: 803 SGEDILIGGLKPFTKYEFAVQSHGVDMDGPFGSVVERSTLPDRPSTPPSDLRLSPLTPST 862
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYH 180
V + W P+ I+ Y + ++ + T++ GN A++ L RY
Sbjct: 863 VRLHW--CPPTEPNGEIVEYLI-LYSNNHTQPEHQWTLLTTEGNIFSAEVHGLESDTRYF 919
Query: 181 MRVLAFSNGGDGRMS--SPAITFQ 202
++ A + G G S IT Q
Sbjct: 920 FKMGARTEVGPGPFSRLQDVITLQ 943
>UNIPROTKB|F1NY17 [details] [associations]
symbol:NFASC "Neurofascin" species:9031 "Gallus gallus"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 PANTHER:PTHR10489:SF41
EMBL:AADN02044911 IPI:IPI00821509 ProteinModelPortal:F1NY17
Ensembl:ENSGALT00000040537 ArrayExpress:F1NY17 Uniprot:F1NY17
Length = 1168
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/209 (25%), Positives = 91/209 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN------PEETAV 55
P+ AP V R NSTAI +TW + L + I+G+L +R +W++ + +
Sbjct: 820 PKAAPTDVRIRVLNSTAIALTWTRVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQ 877
Query: 56 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
Y RN ++ L P + Y ++++ N G+GP SE T P P + I+
Sbjct: 878 YVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSP-RYLRIR 936
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 937 QPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQRT 992
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPAI 199
P RY + A + GDG + SPA+
Sbjct: 993 DPISRYRFFLRARTQVGDGEVIVEESPAL 1021
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/201 (22%), Positives = 85/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P++ P GV G + +TW P+ + G + + ++ W+ +P + +Y + T
Sbjct: 722 PEINPTGVQGAGTQKNNMEITWTPLNATQAY--GPNLRYIVR-WRRRDPRGS--WY-NET 775
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +V P Y +KV A N+ G PE E Y+ + P+ P+ V I+ +N T
Sbjct: 776 VKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNST 835
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM------SRANDTIIPVGNTLDADIVDLS 174
+ +TW V + + Y+ W D + S+ + G+ + L
Sbjct: 836 AIALTWTRVHLDTIQGQLKEYRAYFWR-DSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLF 894
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 895 PYSNYKLEMVVTNGRGDGPRS 915
>UNIPROTKB|J9JHE7 [details] [associations]
symbol:NFASC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR026965 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007422 GO:GO:0050808 GO:GO:0042552
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 PANTHER:PTHR10489:SF41
EMBL:AAEX03018246 EMBL:AAEX03018247 Ensembl:ENSCAFT00000049341
Uniprot:J9JHE7
Length = 1333
Score = 133 (51.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 41/163 (25%), Positives = 75/163 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 805 PRAAPTDVKIRVLNSTAISLQWNRV--YPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 862
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 863 QASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 921
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 158
N T+++ W + P +IGY ++ + +S N T
Sbjct: 922 QPNLETINLEWDH--PEHPNGILIGYTLK-YVAFTSLSPVNGT 961
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 707 PESNPADVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRRRETRET---WNNAT 760
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T
Sbjct: 761 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNST 820
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V P + + Y+ W + + P G+ + L
Sbjct: 821 AISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFP-GDRPRGVVSRLF 879
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 880 PYSNYKLEMVVVNGRGDGPRS 900
Score = 57 (25.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 151 DMSRANDTIIPVGNTLD-ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 201
D + T+ PV + + + DL PG Y +RV +S +G +SS ITF
Sbjct: 1131 DSNHTKKTV-PVKSQVQPVQLTDLYPGMTYTLRV--YSRDKEG-ISSTVITF 1178
>UNIPROTKB|F1NY14 [details] [associations]
symbol:NFASC "Neurofascin" species:9031 "Gallus gallus"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 PANTHER:PTHR10489:SF41
EMBL:AADN02044911 IPI:IPI00822763 ProteinModelPortal:F1NY14
Ensembl:ENSGALT00000040544 ArrayExpress:F1NY14 Uniprot:F1NY14
Length = 1249
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 53/209 (25%), Positives = 91/209 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN------PEETAV 55
P+ AP V R NSTAI +TW + L + I+G+L +R +W++ + +
Sbjct: 836 PKAAPTDVRIRVLNSTAIALTWTRVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQ 893
Query: 56 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
Y RN ++ L P + Y ++++ N G+GP SE T P P + I+
Sbjct: 894 YVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSP-RYLRIR 952
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 953 QPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQRT 1008
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPAI 199
P RY + A + GDG + SPA+
Sbjct: 1009 DPISRYRFFLRARTQVGDGEVIVEESPAL 1037
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/201 (22%), Positives = 85/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P++ P GV G + +TW P+ + G + + ++ W+ +P + +Y + T
Sbjct: 738 PEINPTGVQGAGTQKNNMEITWTPLNATQAY--GPNLRYIVR-WRRRDPRGS--WY-NET 791
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +V P Y +KV A N+ G PE E Y+ + P+ P+ V I+ +N T
Sbjct: 792 VKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNST 851
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM------SRANDTIIPVGNTLDADIVDLS 174
+ +TW V + + Y+ W D + S+ + G+ + L
Sbjct: 852 AIALTWTRVHLDTIQGQLKEYRAYFWR-DSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLF 910
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 911 PYSNYKLEMVVTNGRGDGPRS 931
>UNIPROTKB|Q8TDY8 [details] [associations]
symbol:IGDCC4 "Immunoglobulin superfamily DCC subclass
member 4" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
HSSP:Q92859 EMBL:AB052622 EMBL:AB046848 IPI:IPI00151989
IPI:IPI00154834 RefSeq:NP_066013.1 UniGene:Hs.740503
ProteinModelPortal:Q8TDY8 SMR:Q8TDY8 IntAct:Q8TDY8 STRING:Q8TDY8
PhosphoSite:Q8TDY8 DMDM:74760490 PaxDb:Q8TDY8 PRIDE:Q8TDY8
DNASU:57722 Ensembl:ENST00000352385 GeneID:57722 KEGG:hsa:57722
UCSC:uc002aot.1 CTD:57722 GeneCards:GC15M065673 HGNC:HGNC:13770
HPA:HPA008576 neXtProt:NX_Q8TDY8 PharmGKB:PA164720914
eggNOG:NOG316920 HOGENOM:HOG000113009 InParanoid:Q8TDY8 OMA:VEYQFAV
OrthoDB:EOG45HRWQ PhylomeDB:Q8TDY8 GenomeRNAi:57722 NextBio:64665
ArrayExpress:Q8TDY8 Bgee:Q8TDY8 Genevestigator:Q8TDY8
Uniprot:Q8TDY8
Length = 1250
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 47/191 (24%), Positives = 75/191 (39%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
AP V + +S+A+ V W E+ E I IG + Y K + +
Sbjct: 431 APTRVTATPLSSSAVLVAWERPEMHSEQI----IGFSLHYQKARGMDNVEYQFAVNNDTT 486
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
+ L+P+T Y V+AY+ G S L T P P + + NP+ + V
Sbjct: 487 ELQVRDLEPNTDYEFYVVAYSQLGASRTSTPALVHTLDDVPSAAPQ-LSLSSPNPSDIRV 545
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 184
W + PS ++ YK+ +D + + GN + L P K Y +R+
Sbjct: 546 AWLPLPPSLSNGQVVKYKIEYGLGKEDQIFSTEVR---GNETQLMLNSLQPNKVYRVRIS 602
Query: 185 AFSNGGDGRMS 195
A + G G S
Sbjct: 603 AGTAAGFGAPS 613
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 51/204 (25%), Positives = 81/204 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P V + +ST+I + W + I + R W N YY S
Sbjct: 749 PPLPPAHVHAESNSSTSIWLRWKKPDFTTVKIVNYTV--RFSPWGLRNAS-LVTYYTS-- 803
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
+ LI GL+P TKY V ++ +GP T P PPS + + + P+T
Sbjct: 804 SGEDILIGGLKPFTKYEFAVQSHGVDMDGPFGSVVERSTLPDRPSTPPSDLRLSPLTPST 863
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYH 180
V + W P+ I+ Y + ++ + T++ GN A++ L RY
Sbjct: 864 VRLHW--CPPTEPNGEIVEYLI-LYSSNHTQPEHQWTLLTTQGNIFSAEVHGLESDTRYF 920
Query: 181 MRVLAFSNGGDGRMS--SPAITFQ 202
++ A + G G S IT Q
Sbjct: 921 FKMGARTEVGPGPFSRLQDVITLQ 944
>UNIPROTKB|F1SGT7 [details] [associations]
symbol:F1SGT7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070593 "dendrite self-avoidance" evidence=IEA]
[GO:0060060 "post-embryonic retina morphogenesis in camera-type
eye" evidence=IEA] [GO:0048842 "positive regulation of axon
extension involved in axon guidance" evidence=IEA] [GO:0048813
"dendrite morphogenesis" evidence=IEA] [GO:0042327 "positive
regulation of phosphorylation" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 OMA:ECKNKSE
GeneTree:ENSGT00690000101869 EMBL:CU466295 EMBL:CU467733
Ensembl:ENSSSCT00000013204 Uniprot:F1SGT7
Length = 1656
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 50/186 (26%), Positives = 77/186 (41%)
Query: 33 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 92
IRG IG+R +Y N + + + + L T+Y + V A N AG GP
Sbjct: 778 IRGYQIGYR-EYSTGGNFQFNIISIDTTGDSEIYTLDNLNKFTQYGLVVQACNRAGTGPS 836
Query: 93 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQ 150
S+ + T P PP V +P ++ ++W +S + G++V W +D
Sbjct: 837 SQEIITTTLEDVPSSPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLMDG 896
Query: 151 DMSRAND-TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 209
+ D + +L+ D L Y ++VLAF+ GDG S T KE
Sbjct: 897 ALRAGRDQNVTTTQPSLELD--GLEKYTNYSIQVLAFTRAGDGVRSEQIFT----RTKED 950
Query: 210 KSGSPA 215
G PA
Sbjct: 951 VPGPPA 956
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 60/222 (27%), Positives = 99/222 (44%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--DNPEETAVYYL 58
+P P+ V + + +I+++W+ + +E + G L G R+ YW D
Sbjct: 848 VPSSPPENVQAIATSPESISISWSTLS--KEALNGILQGFRVIYWANLMDGALRAGRDQN 905
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
TT+ + GL+ T Y ++V+A+ AG+G SE+ RT P PP+ V +
Sbjct: 906 VTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPG-PPAGVKAAAAS 964
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV----GNTLDADIVDLS 174
+ V V+W P + II K V+ S T+I ++ I +LS
Sbjct: 965 ASMVFVSWL---PPLKLNGIIR-KYTVF-----CSHPYPTVISEFEASPDSFSYRIPNLS 1015
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPAL 216
++Y + V+A ++ G G SS IT E K G+P L
Sbjct: 1016 RNRQYSVWVVAVTSAGRGN-SSEIITV----EPLAKGGAPML 1052
>UNIPROTKB|F1NSJ3 [details] [associations]
symbol:NFASC "Neurofascin" species:9031 "Gallus gallus"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 IPI:IPI00586495 PANTHER:PTHR10489:SF41
EMBL:AADN02044911 Ensembl:ENSGALT00000000917 ArrayExpress:F1NSJ3
Uniprot:F1NSJ3
Length = 1272
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 53/209 (25%), Positives = 91/209 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN------PEETAV 55
P+ AP V R NSTAI +TW + L + I+G+L +R +W++ + +
Sbjct: 840 PKAAPTDVRIRVLNSTAIALTWTRVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQ 897
Query: 56 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
Y RN ++ L P + Y ++++ N G+GP SE T P P + I+
Sbjct: 898 YVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSP-RYLRIR 956
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 957 QPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQRT 1012
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPAI 199
P RY + A + GDG + SPA+
Sbjct: 1013 DPISRYRFFLRARTQVGDGEVIVEESPAL 1041
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/201 (22%), Positives = 85/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P++ P GV G + +TW P+ + G + + ++ W+ +P + +Y + T
Sbjct: 742 PEINPTGVQGAGTQKNNMEITWTPLNATQAY--GPNLRYIVR-WRRRDPRGS--WY-NET 795
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +V P Y +KV A N+ G PE E Y+ + P+ P+ V I+ +N T
Sbjct: 796 VKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNST 855
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM------SRANDTIIPVGNTLDADIVDLS 174
+ +TW V + + Y+ W D + S+ + G+ + L
Sbjct: 856 AIALTWTRVHLDTIQGQLKEYRAYFWR-DSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLF 914
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 915 PYSNYKLEMVVTNGRGDGPRS 935
>UNIPROTKB|F1NSL6 [details] [associations]
symbol:PTPRQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0045598 "regulation of fat cell differentiation" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335 GO:GO:0045598
GeneTree:ENSGT00700000104166 OMA:DVELEWE EMBL:AADN02009762
EMBL:AADN02009760 EMBL:AADN02009761 IPI:IPI00814444
Ensembl:ENSGALT00000017794 ArrayExpress:F1NSL6 Uniprot:F1NSL6
Length = 2314
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 57/206 (27%), Positives = 86/206 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ + +ST I +++ P +I +I Y K N E V
Sbjct: 770 VPNSAPENITYWNISSTEIELSFFP-----PSIPNGIIQTYTIYLKRINGTEERVI---N 821
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT I L+ T+Y ++V A GEG S T AP PP ++ +K ++
Sbjct: 822 TTHLVLRITDLKKYTEYMIEVSASTMLGEGLRSAPLHILTDEDAPSSPPESLSVKQLSGV 881
Query: 121 TVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
TV ++W+ P E II Y V VW ++ + + V T + DL Y
Sbjct: 882 TVKLSWK---PPLEPNGIILYYTVYVW------NKTSKRSVNVTET-SLEFTDLENNSEY 931
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGE 205
V A + GDG + S I F+ E
Sbjct: 932 SAYVAASTRFGDGNIKSDTIIFRTSE 957
Score = 127 (49.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 48/192 (25%), Positives = 84/192 (43%)
Query: 7 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 66
Q + + +S+++ + W+P N G++I H Y E +T + + T+ N
Sbjct: 585 QSISYKNISSSSVLLYWDP----PANPNGKII-HYTVYAME---LDTKRAFHTTTSNNSL 636
Query: 67 LIVGLQPDTKYYVKVMAYNNAGEGPESER--YLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L+ GL+ T Y ++V A GE SE RT P PP V I + T +++
Sbjct: 637 LMTGLKKYTNYKMRVAASTVIGESALSEENDIFVRTPEDEPDSPPQNVEIINVTATEINL 696
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 184
W + P I Y+V S ++D + ++ + + ++ P Y++ V
Sbjct: 697 KW--LPPEQPNGLITHYEVLY-------SDSSDLFVRNTSSTNISLTEMMPYTLYNISVR 747
Query: 185 AFSNGGDGRMSS 196
AF+ G G SS
Sbjct: 748 AFTRLGHGNQSS 759
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 1 MPQVAPQ-GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
+P+ AP FS ++T++ ++W+P ++ + G +I + + + E+ +
Sbjct: 1161 VPESAPIIKTFSN-LSTTSVMLSWDPP--VKPS--GIIISYDLNLF---GSEKNISF--- 1209
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
TT N+ ++ L P T Y + A G GP S + T P PP + I
Sbjct: 1210 STTNNFIILEDLVPSTLYSIYTAARTMKGSGPSSVLHFY-TDESVPLAPPQNLTITNYTA 1268
Query: 120 TTVHVTWRYVSPSFEEEPIIG-YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
+V + W PS + +I Y +++++ D + + G+ +A + L P
Sbjct: 1269 DSVWLKWE---PSPQPNGVITRYNLKIYQNDTEKIFYQNIS---GSNNEAKLDGLKPFST 1322
Query: 179 YHMRVLAFSNGGDGRMSSPAITF 201
Y + V AF+ G+G S A+ F
Sbjct: 1323 YFISVSAFTKLGNGNQFSNAVQF 1345
>UNIPROTKB|F1SK64 [details] [associations]
symbol:ROBO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0060763 "mammary duct terminal
end bud growth" evidence=IEA] [GO:0050925 "negative regulation of
negative chemotaxis" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0033600 "negative regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030673
"axolemma" evidence=IEA] [GO:0030275 "LRR domain binding"
evidence=IEA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IEA] [GO:0009986
"cell surface" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002042 "cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 GO:GO:0007411 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0030673 GO:GO:0006919
GO:GO:0050772 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0033600 InterPro:IPR003596 SMART:SM00406 GO:GO:0060763
GO:GO:0070100 GO:GO:0002042 GO:GO:0021836 GO:GO:0050925
GO:GO:0035385 GeneTree:ENSGT00660000095158 OMA:NSDSNLT
EMBL:CU633698 EMBL:CU928595 EMBL:FP085482
Ensembl:ENSSSCT00000013132 Uniprot:F1SK64
Length = 1526
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 50/186 (26%), Positives = 82/186 (44%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S++I V W ++ + I+G I +R E V+ + T+N +I L+
Sbjct: 571 SSSSIEVHWT-VDQQSQYIQGYKILYRPS-GVTHGEAEWLVFEVRTPTKNSVVIPDLKKG 628
Query: 75 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPS 132
Y +K + N +G +SE +T +AP PP +V + N T + V+W+
Sbjct: 629 VNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVSWQPPPED 688
Query: 133 FEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ + YKV W + + N T+ G+T I L PG RY + V A + G
Sbjct: 689 TQNGMVQEYKV--WCLGNETRYHINKTVD--GSTFSVVIPSLVPGIRYSVEVAASTGAGA 744
Query: 192 GRMSSP 197
G S P
Sbjct: 745 GVKSEP 750
>RGD|61941 [details] [associations]
symbol:Robo1 "roundabout, axon guidance receptor, homolog 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0002042 "cell
migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007156 "homophilic
cell adhesion" evidence=ISO] [GO:0007411 "axon guidance"
evidence=ISO;IDA] [GO:0007417 "central nervous system development"
evidence=IEP] [GO:0008046 "axon guidance receptor activity"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016199 "axon midline choice point recognition"
evidence=IEP;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=ISO] [GO:0021891
"olfactory bulb interneuron development" evidence=ISO] [GO:0030275
"LRR domain binding" evidence=ISO] [GO:0030424 "axon" evidence=IDA]
[GO:0030673 "axolemma" evidence=ISO] [GO:0033600 "negative
regulation of mammary gland epithelial cell proliferation"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=IMP] [GO:0050772 "positive
regulation of axonogenesis" evidence=ISO] [GO:0050925 "negative
regulation of negative chemotaxis" evidence=ISO] [GO:0060763
"mammary duct terminal end bud growth" evidence=ISO] [GO:0070100
"negative regulation of chemokine-mediated signaling pathway"
evidence=ISO] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 EMBL:AF041082
RGD:61941 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424 GO:GO:0043025
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0016199
GO:GO:0030673 GO:GO:0006919 GO:GO:0048814 GO:GO:0050772
Reactome:REACT_96538 GO:GO:0021510 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007156 GO:GO:0033600 GO:GO:0060763 GO:GO:0070100
GO:GO:0002042 GO:GO:0008046 CTD:6091 eggNOG:NOG238978
HOGENOM:HOG000010267 HOVERGEN:HBG073476 KO:K06753 OrthoDB:EOG44QT01
GO:GO:0021836 GO:GO:0050925 GO:GO:0035385 IPI:IPI00194926 PIR:T14160
RefSeq:NP_071524.1 UniGene:Rn.44468 ProteinModelPortal:O55005
SMR:O55005 DIP:DIP-48941N IntAct:O55005 STRING:O55005
PhosphoSite:O55005 PRIDE:O55005 GeneID:58946 KEGG:rno:58946
UCSC:RGD:61941 InParanoid:O55005 NextBio:611552 ArrayExpress:O55005
Genevestigator:O55005 GermOnline:ENSRNOG00000029614 Uniprot:O55005
Length = 1651
Score = 144 (55.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 49/186 (26%), Positives = 81/186 (43%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S+++ V W ++ + I+G I +R E V+ + T+N +I L+
Sbjct: 687 SSSSVEVHWT-VDQQSQYIQGYKILYRPS-GASHGESEWLVFEVRTPTKNSVVIPDLRKG 744
Query: 75 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPS 132
Y +K + N +G +SE +T + P PP +V + N T + VTW+
Sbjct: 745 VNYEIKARPFFNEFQGADSEIKFAKTLEERPSAPPRSVTVSKNDGNGTAILVTWQPPPED 804
Query: 133 FEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ + YKV W + + N T+ G+T I L PG RY + V A + G
Sbjct: 805 TQNGMVQEYKV--WCLGNETRYHINKTVD--GSTFSVVIPFLVPGIRYSVEVAASTGAGP 860
Query: 192 GRMSSP 197
G S P
Sbjct: 861 GVKSEP 866
Score = 43 (20.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P +T+Q G E G P L
Sbjct: 944 TPTVTYQRGGEAVSSGGRPGL 964
>ZFIN|ZDB-GENE-080229-6 [details] [associations]
symbol:nfasca "neurofascin homolog (chicken) a"
species:7955 "Danio rerio" [GO:0019226 "transmission of nerve
impulse" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR026965 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-080229-6 GO:GO:0007411
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003006
PROSITE:PS00290 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007422 GO:GO:0050808
GO:GO:0042552 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR026966
Pfam:PF13882 GeneTree:ENSGT00690000101868 PANTHER:PTHR10489:SF41
EMBL:CR354444 IPI:IPI00928919 Ensembl:ENSDART00000127846
Bgee:F1QFZ7 Uniprot:F1QFZ7
Length = 1369
Score = 144 (55.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 53/225 (23%), Positives = 94/225 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P V P G+ G + +TW ++ N G + + + + ++D EE + + T
Sbjct: 727 PDVVPSGLKGWGSKKNNMEITWQAMQNTERN--GPNLRYVLSWRRKDTEEE----WNNIT 780
Query: 62 TRNWALIVGLQPDT--KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
T +V DT Y +K+ A N+ G GPES + + P P+ + + IN
Sbjct: 781 TAKTKHVVH-NTDTYVPYEIKIQAVNDFGHGPESNMVIGYSGEDKPSAAPTDLRVSKINS 839
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS--RANDTIIPVGNTLDAD-----IVD 172
T V++ W V S YK+ W + + N T + G A+ + +
Sbjct: 840 TKVNIHWEPVEQSSVNGEFKEYKLYYWREASLIKGLKVNKTKLHKGFFTTAEHPSGILTE 899
Query: 173 LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALY 217
L P +Y M ++ + +G S+ + F KE + G+P +
Sbjct: 900 LYPYSKYKMYMVVANREHEGPQSN-TVEFYT---KEGEPGAPKYF 940
>UNIPROTKB|E2QWE6 [details] [associations]
symbol:PTPRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004725 "protein tyrosine phosphatase
activity" evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335
GeneTree:ENSGT00700000104166 OMA:DVELEWE EMBL:AAEX03009886
EMBL:AAEX03009883 EMBL:AAEX03009884 EMBL:AAEX03009885
Ensembl:ENSCAFT00000009346 Uniprot:E2QWE6
Length = 2333
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 57/206 (27%), Positives = 89/206 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ + + +S I +++ P + G + + I + EE +
Sbjct: 803 VPDNAPENITYKNISSGEIELSFLP----PSSPNGIIQKYTIYLRRSSENEERTI----N 854
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT I GL+ T+Y ++V A +GEG SE T AP PP +K ++
Sbjct: 855 TTSLTQSIKGLKKYTQYKIEVSASTLSGEGVRSEPLNVLTEEDAPDSPPQDFSVKQLSGV 914
Query: 121 TVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
TV ++W+ P E II Y V VW+ R++ I V + DL Y
Sbjct: 915 TVKLSWQ---PPLEPNGIILYYTVYVWD------RSSLKTINVTEA-SLEFSDLDYDVEY 964
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGE 205
+ V A + GDG+M S I F+ E
Sbjct: 965 NAYVTASTRFGDGKMRSSIINFRTPE 990
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 56/198 (28%), Positives = 94/198 (47%)
Query: 12 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
+ +S++I + W+P E N G++ + I Y E +T + TT N LI GL
Sbjct: 623 KNISSSSILLYWDPPEY--PN--GKITHYTI-YAME---LDTNRAFQMTTTDNSFLITGL 674
Query: 72 QPDTKYYVKVMAYNNAGEGPESER--YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 129
+ TKY ++V A + GE SE RT P+ PP V + + + +++ W
Sbjct: 675 KKYTKYKMRVAASTHVGESSLSEENDIFVRTPEDEPESPPQDVEVIDVTASEINLKW--- 731
Query: 130 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV--DLSPGKRYHMRVLAFS 187
SP E+P G V +EV + + DT+ + NT +I+ DL P Y++ V +++
Sbjct: 732 SPP--EKPN-GIIV-AYEV---LYKNTDTLF-MKNTSTTNIILRDLKPYNLYNISVRSYT 783
Query: 188 NGGDGRMSSPAITFQMGE 205
G G S ++ + E
Sbjct: 784 RFGHGNQLSSLLSVRTSE 801
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 45/141 (31%), Positives = 67/141 (47%)
Query: 9 VFSRG--FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW- 65
VF G S I ++WN N GR+I + +KY KE P Y RT +
Sbjct: 106 VFLAGERVGSAGILLSWNT----PPNPNGRIISYIVKY-KEVCPWMQTEYTQVRTKPDSL 160
Query: 66 -ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L+ L P T Y +KV A N+AG G S+ +L +T AP K + ++ N ++V++
Sbjct: 161 EVLLTNLNPGTTYEIKVAAENSAGIGVFSDPFLFQTAESAPGKVVNLT-VEAFNYSSVNL 219
Query: 125 TWRYVSPSFEEEPIIGYKVRV 145
W Y+ P I +K+ V
Sbjct: 220 IW-YL-PWQPNGKITSFKISV 238
>UNIPROTKB|E1BBI3 [details] [associations]
symbol:L1CAM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050850 "positive regulation of calcium-mediated
signaling" evidence=IEA] [GO:0043621 "protein self-association"
evidence=IEA] [GO:0043195 "terminal bouton" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0034109 "homotypic
cell-cell adhesion" evidence=IEA] [GO:0033691 "sialic acid binding"
evidence=IEA] [GO:0033631 "cell-cell adhesion mediated by integrin"
evidence=IEA] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IEA] [GO:0009897 "external side of plasma
membrane" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0007159 "leukocyte cell-cell adhesion" evidence=IEA]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=IEA]
[GO:0007156 "homophilic cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009897 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0042734 GO:GO:0043195
GO:GO:0050850 GO:GO:0007166 GO:GO:0033631 GO:GO:0033691
GO:GO:0007157 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GO:GO:0007159 GO:GO:0022409 GO:GO:0034109 InterPro:IPR026966
Pfam:PF13882 GeneTree:ENSGT00690000101868 CTD:3897 KO:K06550
EMBL:DAAA02070079 IPI:IPI00696555 RefSeq:NP_001179364.1
UniGene:Bt.55555 ProteinModelPortal:E1BBI3 PRIDE:E1BBI3
Ensembl:ENSBTAT00000017906 GeneID:516017 KEGG:bta:516017
OMA:MDWNAPQ NextBio:20872097 Uniprot:E1BBI3
Length = 1257
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 51/210 (24%), Positives = 87/210 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + + +TW P+ + N + +R++ W+ P++ + +
Sbjct: 714 PEKNPVDVKGEGNETNNMVITWKPLRWMDWN--APQVQYRVQ-WR---PQKMQGAWQEQI 767
Query: 62 TRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ L+V Y +KV N+ G+GPE + + + PQ P +K +N +
Sbjct: 768 VSDPFLVVSNTSTFVPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSS 827
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVW-EVDQDMSRANDT----IIPVGNTLDADIVDLSP 175
TV V W+ V P+ + + GY V W E Q ++ N + L P
Sbjct: 828 TVLVRWQSVDPAQVKGHLRGYNVTYWWEGSQRKHNKRHVHKGHVVVPANATSTILGGLRP 887
Query: 176 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y + V AF+ G G S +TF E
Sbjct: 888 YSSYWVEVQAFNGRGLGPASG--MTFNTPE 915
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 44/197 (22%), Positives = 86/197 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR- 60
PQ +P + NS+ + V W ++ + ++G L G+ + YW E + + ++ +
Sbjct: 812 PQASPLLEPVKALNSSTVLVRWQSVDPAQ--VKGHLRGYNVTYWWEGSQRKHNKRHVHKG 869
Query: 61 -----TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ GL+P + Y+V+V A+N G GP S T P P A+H++
Sbjct: 870 HVVVPANATSTILGGLRPYSSYWVEVQAFNGRGLGPASGMTFN-TPEGVPGHP-EALHLE 927
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
+ T++ + W+ P + GY + ++ +P ++ +LSP
Sbjct: 928 CQSDTSLLLHWQ--PPLSHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSP 985
Query: 176 GKRYHMRVLAFSNGGDG 192
RY ++ A + G G
Sbjct: 986 RLRYRFQLQATTREGPG 1002
>UNIPROTKB|K7GP66 [details] [associations]
symbol:LOC100521988 "Integrin beta" species:9823 "Sus
scrofa" [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0048870 "cell motility" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0008305 "integrin
complex" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003644 InterPro:IPR003961
InterPro:IPR012013 InterPro:IPR016201 Pfam:PF00041 Pfam:PF03160
PROSITE:PS50853 SMART:SM00060 SMART:SM00237 SMART:SM00327
InterPro:IPR015812 InterPro:IPR012896 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR003659 SMART:SM00423 InterPro:IPR002369
PANTHER:PTHR10082 Pfam:PF07965 Pfam:PF00362 PRINTS:PR01186
SMART:SM00187 SUPFAM:SSF69687 SUPFAM:SSF103575 PROSITE:PS00243
GeneTree:ENSGT00700000104058 PANTHER:PTHR10082:SF6 EMBL:CU928968
Ensembl:ENSSSCT00000034728 Uniprot:K7GP66
Length = 1752
Score = 144 (55.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 43/147 (29%), Positives = 67/147 (45%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ G+R+KYW + +PE A + L T +
Sbjct: 1130 APQNPNAKAAGSRKIHFNWLPPP-------GKPTGYRVKYWIQGDPESEA-HLLDSTVPS 1181
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT+++ P +P + ++ T +
Sbjct: 1182 VEL-TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEP-GRLAFNVVSSTVTQL 1239
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+W P+ I Y+V V++D
Sbjct: 1240 SW--AEPAETNGEITAYEVCYGLVNED 1264
>ZFIN|ZDB-GENE-060302-1 [details] [associations]
symbol:prtgb "protogenin homolog b (Gallus gallus)"
species:7955 "Danio rerio" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-060302-1 GO:GO:0016021 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
eggNOG:NOG316920 HOGENOM:HOG000113009 HOVERGEN:HBG101283
EMBL:DQ360116 IPI:IPI00610018 UniGene:Dr.87895
ProteinModelPortal:Q2EY13 InParanoid:Q2EY13 OrthoDB:EOG4HHP1M
Uniprot:Q2EY13
Length = 1069
Score = 142 (55.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 51/179 (28%), Positives = 83/179 (46%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRTTRNWALIVGLQPDT 75
T I V+W P+ + RGR+ +R+ Y + + +V +S L+ LQPDT
Sbjct: 516 TDILVSWQPLP--PKLSRGRVSAYRLSYRTATDEQVNSVELPVSGENGTQYLLQDLQPDT 573
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA--VHIKGINPTTVHVTWRYVSPSF 133
Y +++ G S RT + + P A + ++ +N T+V V W P+
Sbjct: 574 IYLIRMSVSTRVGWSQPSAWSSHRTPKTSSATVPPAPNLELEPLNCTSVSVRW---FPAA 630
Query: 134 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 192
+ I G+K+ Q S + T +P + I L+P +YH++VLAFS GDG
Sbjct: 631 SDVLIQGFKLSFHPDGQ--SEDSITQLPPQDHQHT-ITALNPRVKYHVKVLAFSANGDG 686
Score = 141 (54.7 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 43/191 (22%), Positives = 82/191 (42%)
Query: 6 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 65
P ++ +S+A++++W G+ + ++Y E ++V Y+ +T+
Sbjct: 712 PDHTHAKANSSSAVHLSWGRPAFSS----GKPVTFSVRYGPASPSEASSVRYI-QTSEQT 766
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
++ GLQP+T+Y V + + P S +RT +AP PP +V + I T V
Sbjct: 767 VMVTGLQPNTRYEFAVRLHMDQMSSPWSATVYQRTLLEAPMSPPESVKVTLIEADTALVC 826
Query: 126 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 185
W+ P+ + Y V ++ + G A + L G Y +++ A
Sbjct: 827 WK--QPNQPNLSVTHYTVLYASQSSWLAGEWQVLQREGTNTMALLEKLESGNVYLVKISA 884
Query: 186 FSNGGDGRMSS 196
+ GDG S+
Sbjct: 885 SNLAGDGPFSN 895
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 44/183 (24%), Positives = 80/183 (43%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED--NPEETAVYYLSRTT 62
AP+ + + +S+AI + W E + N ++I + I Y K + N EE + TT
Sbjct: 406 APRNIHAETISSSAILLAW---ERPQYNA-DKVIAYSIHYMKSEGLNNEEYQAVIGNDTT 461
Query: 63 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 122
+ ++ L+P Y ++AY G SE+ T P + P + + +PT +
Sbjct: 462 SH--IVDDLEPARNYTFYIVAYMAMGASRMSEQVTRHTLEDVPLRTPE-LSLTSRSPTDI 518
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG--NTLDADIVDLSPGKRYH 180
V+W+ + P + Y++ + D + N +PV N + DL P Y
Sbjct: 519 LVSWQPLPPKLSRGRVSAYRLS-YRTATD-EQVNSVELPVSGENGTQYLLQDLQPDTIYL 576
Query: 181 MRV 183
+R+
Sbjct: 577 IRM 579
>UNIPROTKB|K7GPD4 [details] [associations]
symbol:LOC100521988 "Integrin beta" species:9823 "Sus
scrofa" [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0048870 "cell motility" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0008305 "integrin
complex" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003644 InterPro:IPR003961
InterPro:IPR012013 InterPro:IPR016201 Pfam:PF00041 Pfam:PF03160
PROSITE:PS50853 SMART:SM00060 SMART:SM00237 SMART:SM00327
InterPro:IPR015812 InterPro:IPR012896 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR003659 SMART:SM00423 InterPro:IPR002369
PANTHER:PTHR10082 Pfam:PF07965 Pfam:PF00362 PRINTS:PR01186
SMART:SM00187 SUPFAM:SSF69687 SUPFAM:SSF103575 PROSITE:PS00243
GeneTree:ENSGT00700000104058 PANTHER:PTHR10082:SF6 EMBL:CU928968
Ensembl:ENSSSCT00000035657 Uniprot:K7GPD4
Length = 1805
Score = 144 (55.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 43/147 (29%), Positives = 67/147 (45%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ G+R+KYW + +PE A + L T +
Sbjct: 1130 APQNPNAKAAGSRKIHFNWLPPP-------GKPTGYRVKYWIQGDPESEA-HLLDSTVPS 1181
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT+++ P +P + ++ T +
Sbjct: 1182 VEL-TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEP-GRLAFNVVSSTVTQL 1239
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+W P+ I Y+V V++D
Sbjct: 1240 SW--AEPAETNGEITAYEVCYGLVNED 1264
>UNIPROTKB|F1RVY6 [details] [associations]
symbol:LOC100521988 "Integrin beta" species:9823 "Sus
scrofa" [GO:0005604 "basement membrane" evidence=IEA] [GO:0007229
"integrin-mediated signaling pathway" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0048870 "cell motility" evidence=IEA]
[GO:0046847 "filopodium assembly" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0030056 "hemidesmosome" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0009925 "basal plasma
membrane" evidence=IEA] [GO:0009611 "response to wounding"
evidence=IEA] [GO:0008305 "integrin complex" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003644 InterPro:IPR003961
InterPro:IPR012013 InterPro:IPR016201 Pfam:PF00041 Pfam:PF03160
PROSITE:PS50853 SMART:SM00060 SMART:SM00237 SMART:SM00327
InterPro:IPR015812 InterPro:IPR012896 GO:GO:0007275 GO:GO:0031252
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009611
SUPFAM:SSF49265 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007229 GO:GO:0007160 GO:GO:0048870 GO:GO:0005604
GO:GO:0046847 GO:GO:0009925 GO:GO:0030056 InterPro:IPR003659
SMART:SM00423 GO:GO:0031581 GO:GO:0008305 InterPro:IPR002369
PANTHER:PTHR10082 Pfam:PF07965 Pfam:PF00362 PRINTS:PR01186
SMART:SM00187 SUPFAM:SSF69687 SUPFAM:SSF103575 PROSITE:PS00243
GeneTree:ENSGT00700000104058 OMA:EDDDCTY PANTHER:PTHR10082:SF6
EMBL:CU928968 Ensembl:ENSSSCT00000018729 Uniprot:F1RVY6
Length = 1823
Score = 144 (55.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 43/147 (29%), Positives = 67/147 (45%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ G+R+KYW + +PE A + L T +
Sbjct: 1132 APQNPNAKAAGSRKIHFNWLPPP-------GKPTGYRVKYWIQGDPESEA-HLLDSTVPS 1183
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT+++ P +P + ++ T +
Sbjct: 1184 VEL-TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEP-GRLAFNVVSSTVTQL 1241
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+W P+ I Y+V V++D
Sbjct: 1242 SW--AEPAETNGEITAYEVCYGLVNED 1266
>UNIPROTKB|H0YD15 [details] [associations]
symbol:PTPRQ "Phosphatidylinositol phosphatase PTPRQ"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] InterPro:IPR000242
InterPro:IPR000387 InterPro:IPR003961 InterPro:IPR016130
Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700 PROSITE:PS00383
PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853 SMART:SM00060
SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0004725 GO:GO:0035335 EMBL:AC083812 EMBL:AC074031
HGNC:HGNC:9679 Ensembl:ENST00000532722 Uniprot:H0YD15
Length = 1996
Score = 144 (55.7 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 58/206 (28%), Positives = 89/206 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ + + +S I +++ P + G + + I Y K N E +
Sbjct: 455 VPDSAPENITYKNISSGEIELSFLP----PSSPNGIIQKYTI-YLKRSNGNEERTINTTS 509
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T+N I L+ T+Y ++V A GEG S T AP PP +K ++
Sbjct: 510 LTQN---IKVLKKYTQYIIEVSASTLKGEGVRSAPISILTEEDAPDSPPQDFSVKQLSGV 566
Query: 121 TVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
TV ++W+ P E II Y V VW +R++ I V T ++ DL Y
Sbjct: 567 TVKLSWQ---PPLEPNGIILYYTVYVW------NRSSLKTINVTET-SLELSDLDYNVEY 616
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGE 205
V A + GDG+ S I+FQ E
Sbjct: 617 SAYVTASTRFGDGKTRSNIISFQTPE 642
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 52/194 (26%), Positives = 80/194 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIR--EN--IRGRLIGHRIKYWK-EDNPEETA 54
+P V FS ST+ +TW P ++ +N I +L + K W+ E+ E
Sbjct: 1126 VPSVPTNIAFS-DVQSTSATLTWIRPDTILGYFQNYKITTQLRAQKCKEWESEECVEYQK 1184
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
+ YL + GL+ Y +V A NAG G S +T P PP VH+
Sbjct: 1185 IQYLYEAHLTEETVYGLKKFRWYRFQVAASTNAGYGNASNWISTKTLPGPPDGPPENVHV 1244
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDL 173
+P ++ ++W P+ P Y + V VD D N + I +I DL
Sbjct: 1245 VATSPFSISISWS--EPAVITGPTC-YLIDVKSVDND--EFNISFIKSNEENKTIEIKDL 1299
Query: 174 SPGKRYHMRVLAFS 187
RY + + AF+
Sbjct: 1300 EIFTRYSVVITAFT 1313
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 57/208 (27%), Positives = 90/208 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P+ +P + +ST++ ++W+P ++ N G +I + + P E Y
Sbjct: 846 VPETSPIINTFKNLSSTSVLLSWDPP--VKPN--GAIISYDLTL---QGPNEN---YSFI 895
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T+ N+ ++ L P T Y A G GP S + T P PP + + IN T
Sbjct: 896 TSDNYIILEELSPFTLYSFFAAARTRKGLGPSSILFFY-TDESVPLAPPQNLTL--INCT 952
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---GNTLDADIVDLSPGK 177
+ V W SPS P+ G V+V+ + DTI G +A +V L P
Sbjct: 953 SDFV-WLKWSPS----PLPGGIVKVYSF-KIHEHETDTIYYKNISGFKTEAKLVGLEPVS 1006
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y +RV AF+ G+G S + F E
Sbjct: 1007 TYSIRVSAFTKVGNGNQFSNVVKFTTQE 1034
>UNIPROTKB|Q9UMZ3 [details] [associations]
symbol:PTPRQ "Phosphatidylinositol phosphatase PTPRQ"
species:9606 "Homo sapiens" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
evidence=IDA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0042472
GO:GO:0004725 GO:GO:0035335 GO:GO:0045598 Orphanet:90636
eggNOG:COG5599 EMBL:AC083812 HSSP:Q12913 EMBL:AC074031
EMBL:AF169351 IPI:IPI00741536 UniGene:Hs.539284
ProteinModelPortal:Q9UMZ3 SMR:Q9UMZ3 STRING:Q9UMZ3
PhosphoSite:Q9UMZ3 DMDM:158563998 PaxDb:Q9UMZ3 PRIDE:Q9UMZ3
Ensembl:ENST00000266688 UCSC:uc001sze.2 GeneCards:GC12P080837
H-InvDB:HIX0201920 HGNC:HGNC:9679 MIM:603317 MIM:613391
neXtProt:NX_Q9UMZ3 HOGENOM:HOG000115793 HOVERGEN:HBG108308
InParanoid:Q9UMZ3 ArrayExpress:Q9UMZ3 Bgee:Q9UMZ3 CleanEx:HS_PTPRQ
Genevestigator:Q9UMZ3 Uniprot:Q9UMZ3
Length = 2332
Score = 144 (55.7 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 58/206 (28%), Positives = 89/206 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ + + +S I +++ P + G + + I Y K N E +
Sbjct: 800 VPDSAPENITYKNISSGEIELSFLP----PSSPNGIIKKYTI-YLKRSNGNEERTINTTS 854
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T+N I L+ T+Y ++V A GEG S T AP PP +K ++
Sbjct: 855 LTQN---IKVLKKYTQYIIEVSASTLKGEGVRSAPISILTEEDAPDSPPQDFSVKQLSGV 911
Query: 121 TVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
TV ++W+ P E II Y V VW +R++ I V T ++ DL Y
Sbjct: 912 TVKLSWQ---PPLEPNGIILYYTVYVW------NRSSLKTINVTET-SLELSDLDYNVEY 961
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGE 205
V A + GDG+ S I+FQ E
Sbjct: 962 SAYVTASTRFGDGKTRSNIISFQTPE 987
Score = 130 (50.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 54/196 (27%), Positives = 85/196 (43%)
Query: 9 VFSRG--FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW- 65
VF G S I ++WN N GR+I + +KY KE P VY R+ +
Sbjct: 102 VFLAGERVGSAGILLSWNT----PPNPNGRIISYIVKY-KEVCPWMQTVYTQVRSKPDSL 156
Query: 66 -ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L+ L P T Y +KV A N+AG G S+ +L +T AP K + ++ N + V +
Sbjct: 157 EVLLTNLNPGTTYEIKVAAENSAGIGVFSDPFLFQTAESAPGKVVNLT-VEAYNASAVKL 215
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 184
W Y+ P I +K+ V + D I V + L + + + +
Sbjct: 216 IW-YL-PRQPNGKITSFKISVKHARSGIV-VKDVSIRVEDILTGKLPECNENSESFLWST 272
Query: 185 AFSNGGDGRMSSPAIT 200
A + GR++ P+ T
Sbjct: 273 ASPSPTLGRVTPPSRT 288
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 52/194 (26%), Positives = 80/194 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIR--EN--IRGRLIGHRIKYWK-EDNPEETA 54
+P V FS ST+ +TW P ++ +N I +L + K W+ E+ E
Sbjct: 1471 VPSVPTNIAFS-DVQSTSATLTWIRPDTILGYFQNYKITTQLRAQKCKEWESEECVEYQK 1529
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
+ YL + GL+ Y +V A NAG G S +T P PP VH+
Sbjct: 1530 IQYLYEAHLTEETVYGLKKFRWYRFQVAASTNAGYGNASNWISTKTLPGPPDGPPENVHV 1589
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDL 173
+P ++ ++W P+ P Y + V VD D N + I +I DL
Sbjct: 1590 VATSPFSISISWS--EPAVITGPTC-YLIDVKSVDND--EFNISFIKSNEENKTIEIKDL 1644
Query: 174 SPGKRYHMRVLAFS 187
RY + + AF+
Sbjct: 1645 EIFTRYSVVITAFT 1658
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 57/208 (27%), Positives = 90/208 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P+ +P + +ST++ ++W+P ++ N G +I + + P E Y
Sbjct: 1191 VPETSPIINTFKNLSSTSVLLSWDPP--VKPN--GAIISYDLTL---QGPNEN---YSFI 1240
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T+ N+ ++ L P T Y A G GP S + T P PP + + IN T
Sbjct: 1241 TSDNYIILEELSPFTLYSFFAAARTRKGLGPSSILFFY-TDESVPLAPPQNLTL--INCT 1297
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---GNTLDADIVDLSPGK 177
+ V W SPS P+ G V+V+ + DTI G +A +V L P
Sbjct: 1298 SDFV-WLKWSPS----PLPGGIVKVYSF-KIHEHETDTIYYKNISGFKTEAKLVGLEPVS 1351
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y +RV AF+ G+G S + F E
Sbjct: 1352 TYSIRVSAFTKVGNGNQFSNVVKFTTQE 1379
>WB|WBGene00006776 [details] [associations]
symbol:unc-40 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005042 "netrin receptor activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0031253 "cell
projection membrane" evidence=IDA] [GO:0031175 "neuron projection
development" evidence=IMP] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030334 "regulation of cell migration"
evidence=IGI;IMP] [GO:0035545 "determination of left/right
asymmetry in nervous system" evidence=IGI;IMP] Reactome:REACT_86739
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0008340 GO:GO:0018991
GO:GO:0040010 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0030334 GO:GO:0008045 GO:GO:0019915
GO:GO:0030163 InterPro:IPR013098 Pfam:PF07679 EMBL:FO080338
GO:GO:0007413 GeneTree:ENSGT00680000099752 GO:GO:0005042
GO:GO:0033563 GO:GO:0031253 GO:GO:0035545 EMBL:U70618 PIR:T25892
RefSeq:NP_491664.1 UniGene:Cel.19414 HSSP:P13596
ProteinModelPortal:G5EF96 SMR:G5EF96 EnsemblMetazoa:T19B4.7.1
EnsemblMetazoa:T19B4.7.2 GeneID:172233 KEGG:cel:CELE_T19B4.7
CTD:172233 WormBase:T19B4.7 OMA:STHATTR NextBio:874611
Uniprot:G5EF96
Length = 1415
Score = 142 (55.0 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 53/201 (26%), Positives = 88/201 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
M AP G+ S S INV W+P ++ N G ++ + I ++K++ + + S
Sbjct: 438 MTSSAPLGLRSTSSGSRFINVEWDPP--VQRN--GNIMRYHI-FYKDNLIDRERMINSSS 492
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--GIN 118
T+ A + LQP T Y ++V A N AG G S+ L+ T K P +
Sbjct: 493 TS---ATLTSLQPSTMYLIRVTAENEAGMGKFSDS-LKVTTNKEQAVPGKVASLTTTATG 548
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
P T+ + W SP +P + YK+ + D +T+I T + +
Sbjct: 549 PETIDIRW---SPPSGGQPALRYKI-FYSHDPLEKNEKETLITTSTT-HYTLHGMDKYTG 603
Query: 179 YHMRVLAFSNGGDGRMSSPAI 199
Y +R+ A + G G +SS +
Sbjct: 604 YQIRIEAEGSNGSG-LSSDTV 623
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/196 (22%), Positives = 92/196 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P + + +ST++ V+W+ E E++ G + G+R+KY + + + T
Sbjct: 632 PSAPPVNIQAEADSSTSVRVSWDEPE--EESVNGEITGYRLKYKTKARGAKGNTLVIDAT 689
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY-LERTYRKAPQKPPSAVHIKGINPT 120
R + + L+P+T+Y +++ N+ G GP S+ ++ + ++ A + I P
Sbjct: 690 AREYTM-GNLEPNTQYLIRMAVVNHNGTGPFSDWVSIDTPGQDKEERTLGAP--REIRPH 746
Query: 121 T----VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
+ V+W + P+ E+ + GY++ W + + +TI +T I L
Sbjct: 747 AGIDYILVSW--LPPADEQNLVRGYQIG-WGLSVPDT---ETIRVTASTTQYKIARLHSE 800
Query: 177 KRYHMRVLAFSNGGDG 192
+ Y + + AF+N G G
Sbjct: 801 RDYVISLRAFNNLGSG 816
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 48/216 (22%), Positives = 94/216 (43%)
Query: 3 QVAPQGVFSRGFNSTA---INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
Q P V S +T I++ W+P + +R ++ E N +ET + +
Sbjct: 533 QAVPGKVASLTTTATGPETIDIRWSPPSGGQPALRYKIFYSHDPL--EKNEKETLI---T 587
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+T ++ L G+ T Y +++ A + G G S+ RT P PP + + +
Sbjct: 588 TSTTHYTLH-GMDKYTGYQIRIEAEGSNGSGLSSDTVKVRTQSDEPSAPPVNIQAEADSS 646
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T+V V+W I GY+++ ++ ++ N +I + + +L P +Y
Sbjct: 647 TSVRVSWDEPEEESVNGEITGYRLK-YKTKARGAKGNTLVIDA-TAREYTMGNLEPNTQY 704
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS-GSP 214
+R+ ++ G G S G++KE ++ G+P
Sbjct: 705 LIRMAVVNHNGTGPFSDWVSIDTPGQDKEERTLGAP 740
>UNIPROTKB|G5EF96 [details] [associations]
symbol:unc-40 "Unc-40 protein" species:6239 "Caenorhabditis
elegans" [GO:0038007 "netrin-activated signaling pathway"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0008340 GO:GO:0018991 GO:GO:0040010 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030334 GO:GO:0008045 GO:GO:0019915 GO:GO:0030163
InterPro:IPR013098 Pfam:PF07679 EMBL:FO080338 GO:GO:0007413
GeneTree:ENSGT00680000099752 GO:GO:0005042 GO:GO:0033563
GO:GO:0031253 GO:GO:0035545 EMBL:U70618 PIR:T25892
RefSeq:NP_491664.1 UniGene:Cel.19414 HSSP:P13596
ProteinModelPortal:G5EF96 SMR:G5EF96 EnsemblMetazoa:T19B4.7.1
EnsemblMetazoa:T19B4.7.2 GeneID:172233 KEGG:cel:CELE_T19B4.7
CTD:172233 WormBase:T19B4.7 OMA:STHATTR NextBio:874611
Uniprot:G5EF96
Length = 1415
Score = 142 (55.0 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 53/201 (26%), Positives = 88/201 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
M AP G+ S S INV W+P ++ N G ++ + I ++K++ + + S
Sbjct: 438 MTSSAPLGLRSTSSGSRFINVEWDPP--VQRN--GNIMRYHI-FYKDNLIDRERMINSSS 492
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--GIN 118
T+ A + LQP T Y ++V A N AG G S+ L+ T K P +
Sbjct: 493 TS---ATLTSLQPSTMYLIRVTAENEAGMGKFSDS-LKVTTNKEQAVPGKVASLTTTATG 548
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
P T+ + W SP +P + YK+ + D +T+I T + +
Sbjct: 549 PETIDIRW---SPPSGGQPALRYKI-FYSHDPLEKNEKETLITTSTT-HYTLHGMDKYTG 603
Query: 179 YHMRVLAFSNGGDGRMSSPAI 199
Y +R+ A + G G +SS +
Sbjct: 604 YQIRIEAEGSNGSG-LSSDTV 623
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/196 (22%), Positives = 92/196 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P + + +ST++ V+W+ E E++ G + G+R+KY + + + T
Sbjct: 632 PSAPPVNIQAEADSSTSVRVSWDEPE--EESVNGEITGYRLKYKTKARGAKGNTLVIDAT 689
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY-LERTYRKAPQKPPSAVHIKGINPT 120
R + + L+P+T+Y +++ N+ G GP S+ ++ + ++ A + I P
Sbjct: 690 AREYTM-GNLEPNTQYLIRMAVVNHNGTGPFSDWVSIDTPGQDKEERTLGAP--REIRPH 746
Query: 121 T----VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 176
+ V+W + P+ E+ + GY++ W + + +TI +T I L
Sbjct: 747 AGIDYILVSW--LPPADEQNLVRGYQIG-WGLSVPDT---ETIRVTASTTQYKIARLHSE 800
Query: 177 KRYHMRVLAFSNGGDG 192
+ Y + + AF+N G G
Sbjct: 801 RDYVISLRAFNNLGSG 816
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 48/216 (22%), Positives = 94/216 (43%)
Query: 3 QVAPQGVFSRGFNSTA---INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
Q P V S +T I++ W+P + +R ++ E N +ET + +
Sbjct: 533 QAVPGKVASLTTTATGPETIDIRWSPPSGGQPALRYKIFYSHDPL--EKNEKETLI---T 587
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 119
+T ++ L G+ T Y +++ A + G G S+ RT P PP + + +
Sbjct: 588 TSTTHYTLH-GMDKYTGYQIRIEAEGSNGSGLSSDTVKVRTQSDEPSAPPVNIQAEADSS 646
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T+V V+W I GY+++ ++ ++ N +I + + +L P +Y
Sbjct: 647 TSVRVSWDEPEEESVNGEITGYRLK-YKTKARGAKGNTLVIDA-TAREYTMGNLEPNTQY 704
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS-GSP 214
+R+ ++ G G S G++KE ++ G+P
Sbjct: 705 LIRMAVVNHNGTGPFSDWVSIDTPGQDKEERTLGAP 740
>FB|FBgn0261046 [details] [associations]
symbol:Dscam3 "Down syndrome cell adhesion molecule 3"
species:7227 "Drosophila melanogaster" [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007156 "homophilic cell adhesion" evidence=IC] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005887 "integral to
plasma membrane" evidence=ISM] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 UniGene:Dm.16769
GeneID:42103 KEGG:dme:Dmel_CG31190 CTD:42103 FlyBase:FBgn0261046
ChiTaRS:Dscam3 GenomeRNAi:42103 NextBio:827185 RefSeq:NP_996226.1
ProteinModelPortal:Q7KSE9 SMR:Q7KSE9 PRIDE:Q7KSE9 UCSC:CG31190-RB
InParanoid:Q7KSE9 OMA:NATAYPL ArrayExpress:Q7KSE9 Bgee:Q7KSE9
Uniprot:Q7KSE9
Length = 2046
Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 53/204 (25%), Positives = 86/204 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLS- 59
P AP V + + + VTW RE+ G LIG+ + +E N +V S
Sbjct: 997 PTEAPSNVQVQTGGESELIVTWQIPP--RESWNGELIGYTVNCSEEKQNINFISVVNSSL 1054
Query: 60 RTT--RNWAL----IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 113
++T WA + GL+ ++Y V + A N+ G GP S T P+ P V+
Sbjct: 1055 KSTIVSGWATTKATLRGLRKYSRYAVTIRAMNSFGSGPWSAAIFGTTAEGVPEAAPQNVN 1114
Query: 114 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
++ ++ ++W F I GYK+ + + I + L+ + L
Sbjct: 1115 CTALSSQSLKISWLEPPLQFHGGIIQGYKILYRPIVHQIDFPAKLEIKRTSNLETYLHTL 1174
Query: 174 SPGKRYHMRVLAFSNGGDGRMSSP 197
Y +RVLA++ GDG S P
Sbjct: 1175 HKASNYSIRVLAYTATGDGLASHP 1198
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 63 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 122
R A++ GL P T + +++ A N +E + +T +AP + PS V ++ + +
Sbjct: 955 RESAIVAGLTPATTFLIRMQAINEIERSAYTEAIVLKTQEEAPTEAPSNVQVQTGGESEL 1014
Query: 123 HVTWRYVSP--SFEEEPIIGYKVRVWEVDQDM-------SRANDTIIPVGNTLDADIVDL 173
VTW+ + P S+ E +IGY V E Q++ S TI+ T A + L
Sbjct: 1015 IVTWQ-IPPRESWNGE-LIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTKATLRGL 1072
Query: 174 SPGKRYHMRVLAFSNGGDGRMSS 196
RY + + A ++ G G S+
Sbjct: 1073 RKYSRYAVTIRAMNSFGSGPWSA 1095
>UNIPROTKB|E1B7H2 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:DAAA02054431 IPI:IPI00706167 Ensembl:ENSBTAT00000025418
Uniprot:E1B7H2
Length = 2934
Score = 144 (55.7 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 57/198 (28%), Positives = 87/198 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P +A G+ ++T + V W P+ G G RI W+ DN E++ S +
Sbjct: 598 PPLAIPGLRVMASDATRVRVAWGPVP-------GAS-GFRIS-WRTDNGLESSQTVPSDS 648
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
T IVGL+P T Y V V A EGP + + RT P P +VH+ ++ ++
Sbjct: 649 TATD--IVGLRPGTSYQVAVSALRGREEGPPAV-IVART---DPLGPVRSVHVTRVSSSS 702
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
V +TW V P GY+V W + ++ + G A++ L P Y +
Sbjct: 703 VTITWNRV-PG-----ATGYRVS-WRSGRGPEKSQ---LVSGEATVAELDGLEPDTEYTV 752
Query: 182 RVLAFSNGGDGRMSSPAI 199
RV A G DG +S +
Sbjct: 753 RVWARVAGVDGTPASAVV 770
>UNIPROTKB|O42414 [details] [associations]
symbol:NFASC "Neurofascin" species:9031 "Gallus gallus"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005886 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155 GO:GO:0007422
GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098 Pfam:PF07679
HOGENOM:HOG000231380 HOVERGEN:HBG000144 InterPro:IPR026966
Pfam:PF13882 eggNOG:NOG293951 EMBL:X65224 EMBL:Y14341 EMBL:Y14342
EMBL:Y14343 EMBL:Y14344 EMBL:Y14345 EMBL:Y14346 EMBL:Y14347
EMBL:Y14348 EMBL:Y14349 EMBL:Y14350 EMBL:Y14351 EMBL:Y14352
EMBL:Y14353 EMBL:Y14354 IPI:IPI00586495 IPI:IPI00681070 PIR:S26180
RefSeq:NP_001004493.1 UniGene:Gga.4889 ProteinModelPortal:O42414
IntAct:O42414 STRING:O42414 PRIDE:O42414 GeneID:419824
KEGG:gga:419824 CTD:23114 InParanoid:O42414 KO:K06757
NextBio:20822822 PANTHER:PTHR10489:SF41 Uniprot:O42414
Length = 1369
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/201 (22%), Positives = 85/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P++ P GV G + +TW P+ + G + + ++ W+ +P + +Y + T
Sbjct: 742 PEINPTGVQGAGTQKNNMEITWTPLNATQAY--GPNLRYIVR-WRRRDPRGS--WY-NET 795
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +V P Y +KV A N+ G PE E Y+ + P+ P+ V I+ +N T
Sbjct: 796 VKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNST 855
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM------SRANDTIIPVGNTLDADIVDLS 174
+ +TW V + + Y+ W D + S+ + G+ + L
Sbjct: 856 AIALTWTRVHLDTIQGQLKEYRAYFWR-DSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLF 914
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 915 PYSNYKLEMVVTNGRGDGPRS 935
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 53/213 (24%), Positives = 92/213 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN------PEETAV 55
P+ AP V R NSTAI +TW + L + I+G+L +R +W++ + +
Sbjct: 840 PKAAPTDVRIRVLNSTAIALTWTRVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQ 897
Query: 56 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
Y RN ++ L P + Y ++++ N G+GP SE T P P + I+
Sbjct: 898 YVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSP-RYLRIR 956
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE--VDQDM--SRANDTIIP--VGNTLDAD 169
N ++++ W + P + GY +R + + S+ T++ N
Sbjct: 957 QPNLESINLEWDH--PEHPNGVLTGYNLRYQASCLSSPVNGSKTGRTLVENFSPNQTRFT 1014
Query: 170 IVDLSPGKRYHMRVLAFSNGGDGRM---SSPAI 199
+ P RY + A + GDG + SPA+
Sbjct: 1015 VQRTDPISRYRFFLRARTQVGDGEVIVEESPAL 1047
>RGD|620779 [details] [associations]
symbol:Ptprq "protein tyrosine phosphatase, receptor type, Q"
species:10116 "Rattus norvegicus" [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0045598
"regulation of fat cell differentiation" evidence=ISO;ISS]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 RGD:620779 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004725
GO:GO:0035335 eggNOG:NOG12793 GO:GO:0045598 HOVERGEN:HBG108308
CTD:374462 EMBL:AF063249 IPI:IPI00209764 PIR:T14328
RefSeq:NP_075214.1 UniGene:Rn.30011 HSSP:P23467
ProteinModelPortal:O88488 STRING:O88488 PRIDE:O88488 GeneID:360417
KEGG:rno:360417 UCSC:RGD:620779 HOGENOM:HOG000214125 NextBio:672803
Genevestigator:O88488 Uniprot:O88488
Length = 2302
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 57/201 (28%), Positives = 95/201 (47%)
Query: 12 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
+ +S++I + W+P E N G++ + I Y E +T + T N LI GL
Sbjct: 580 KNISSSSILLYWDPPEY--PN--GKITHYTI-YATE---LDTNRAFQMTTVDNSFLITGL 631
Query: 72 QPDTKYYVKVMAYNNAGEGPESER--YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 129
+ T+Y ++V A + GE SE RT P+ P V + G++P+ + + W
Sbjct: 632 KKYTRYKMRVAASTHVGESSLSEENDIFVRTPEDEPESSPQDVQVTGVSPSELRLKW--- 688
Query: 130 SPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV--DLSPGKRYHMRVL 184
SP E+P II Y+V + + DT+ V NT DI+ DL P Y++ +
Sbjct: 689 SPP--EKPNGIIIAYEV--------LYQNADTLF-VKNTSTTDIIISDLKPYTLYNISIR 737
Query: 185 AFSNGGDGRMSSPAITFQMGE 205
+++ G G SS ++ + E
Sbjct: 738 SYTRLGHGNQSSSLLSVRTSE 758
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 59/208 (28%), Positives = 86/208 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ + + +S I +++ P + G + + I Y K N E +
Sbjct: 760 VPDSAPENITYKNISSGEIEISFLP----PRSPNGIIQKYTI-YLKRSNSHEARTINTTS 814
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T+ I GL+ T Y ++V A GEG S T AP PP +K ++
Sbjct: 815 LTQT---IGGLKKYTHYVIEVSASTLKGEGIRSRPISILTEEDAPDSPPQNFSVKQLSGV 871
Query: 121 TVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV--DLSPGK 177
TV ++W+ P E II Y V VW D+ RA N +A +V DL
Sbjct: 872 TVMLSWQ---PPLEPNGIILYYTVYVW--DKSSLRAI-------NATEASLVLSDLDYNV 919
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y V A + GDG S I F+ E
Sbjct: 920 DYGACVTASTRFGDGNARSSIINFRTPE 947
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/141 (31%), Positives = 67/141 (47%)
Query: 9 VFSRG--FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW- 65
VF G S I ++WN N GR+I + +KY KE P Y +R +
Sbjct: 62 VFLAGERVGSAGILLSWNT----PPNPNGRIISYVVKY-KEVCPWMQTAYTRARAKPDSL 116
Query: 66 -ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L+ L P T Y +KV A NNAG G S+ +L +T AP K + ++ +N + V++
Sbjct: 117 EVLLTNLNPGTTYEIKVAAENNAGIGVFSDPFLFQTAESAPGKVVNLT-VEALNYSAVNL 175
Query: 125 TWRYVSPSFEEEPIIGYKVRV 145
W Y+ P I +K+ V
Sbjct: 176 IW-YL-PRQPNGKITSFKISV 194
>UNIPROTKB|F1NVC0 [details] [associations]
symbol:NFASC "Neurofascin" species:9031 "Gallus gallus"
[GO:0007422 "peripheral nervous system development" evidence=IEA]
[GO:0002175 "protein localization to paranode region of axon"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0030913 "paranodal
junction assembly" evidence=IEA] [GO:0033010 "paranodal junction"
evidence=IEA] [GO:0033270 "paranode region of axon" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0071205
"protein localization to juxtaparanode region of axon"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR026965 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005886 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007422 GO:GO:0050808
GO:GO:0042552 InterPro:IPR013098 Pfam:PF07679 GO:GO:0033270
GO:GO:0002175 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 GO:GO:0071205 GO:GO:0033010
IPI:IPI00681070 PANTHER:PTHR10489:SF41 OMA:QQASFPG
EMBL:AADN02044911 Ensembl:ENSGALT00000035237 ArrayExpress:F1NVC0
Uniprot:F1NVC0
Length = 1371
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/201 (22%), Positives = 85/201 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P++ P GV G + +TW P+ + G + + ++ W+ +P + +Y + T
Sbjct: 742 PEINPTGVQGAGTQKNNMEITWTPLNATQAY--GPNLRYIVR-WRRRDPRGS--WY-NET 795
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +V P Y +KV A N+ G PE E Y+ + P+ P+ V I+ +N T
Sbjct: 796 VKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNST 855
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM------SRANDTIIPVGNTLDADIVDLS 174
+ +TW V + + Y+ W D + S+ + G+ + L
Sbjct: 856 AIALTWTRVHLDTIQGQLKEYRAYFWR-DSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLF 914
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 915 PYSNYKLEMVVTNGRGDGPRS 935
Score = 135 (52.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 40/149 (26%), Positives = 69/149 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN------PEETAV 55
P+ AP V R NSTAI +TW + L + I+G+L +R +W++ + +
Sbjct: 840 PKAAPTDVRIRVLNSTAIALTWTRVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQ 897
Query: 56 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
Y RN ++ L P + Y ++++ N G+GP SE T P P + I+
Sbjct: 898 YVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSP-RYLRIR 956
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVR 144
N ++++ W + P + GY +R
Sbjct: 957 QPNLESINLEWDH--PEHPNGVLTGYNLR 983
>UNIPROTKB|Q9Y6N7 [details] [associations]
symbol:ROBO1 "Roundabout homolog 1" species:9606 "Homo
sapiens" [GO:0030673 "axolemma" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0060763 "mammary
duct terminal end bud growth" evidence=IEA] [GO:0007156 "homophilic
cell adhesion" evidence=IDA] [GO:0050772 "positive regulation of
axonogenesis" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009986 "cell surface" evidence=IDA] [GO:0042802
"identical protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0050925 "negative regulation of negative
chemotaxis" evidence=IDA] [GO:0016199 "axon midline choice point
recognition" evidence=ISS] [GO:0030275 "LRR domain binding"
evidence=IPI] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IDA] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0007155 "cell adhesion" evidence=TAS]
[GO:0008046 "axon guidance receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0033600
"negative regulation of mammary gland epithelial cell
proliferation" evidence=IMP] [GO:0002042 "cell migration involved
in sprouting angiogenesis" evidence=IMP] [GO:0035385 "Roundabout
signaling pathway" evidence=IMP] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AF040990 GO:GO:0005737 Reactome:REACT_111045
GO:GO:0009986 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0043025 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0016199 GO:GO:0030673 GO:GO:0042802 GO:GO:0006919
GO:GO:0048814 GO:GO:0050772 GO:GO:0021510 InterPro:IPR013098
Pfam:PF07679 GO:GO:0007156 GO:GO:0033600 InterPro:IPR003596
SMART:SM00406 GO:GO:0060763 GO:GO:0070100 EMBL:CH471110
GO:GO:0002042 GO:GO:0008046 EMBL:Z95705 EMBL:AC016946 EMBL:AC055731
EMBL:AC106718 EMBL:AC106720 EMBL:AC108719 EMBL:AC117461
EMBL:AC117479 EMBL:AC119035 EMBL:AC123565 EMBL:AC125624
EMBL:AC125766 EMBL:AC125815 EMBL:AC131008 EMBL:BC001969
EMBL:BC157861 EMBL:BC171855 EMBL:BX538319 IPI:IPI00219798
IPI:IPI00418121 IPI:IPI00418122 IPI:IPI00946477 IPI:IPI00980964
RefSeq:NP_002932.1 RefSeq:NP_598334.2 UniGene:Hs.13640 PDB:2EO9
PDB:2V9Q PDB:2V9R PDB:2V9T PDBsum:2EO9 PDBsum:2V9Q PDBsum:2V9R
PDBsum:2V9T ProteinModelPortal:Q9Y6N7 SMR:Q9Y6N7 DIP:DIP-33034N
IntAct:Q9Y6N7 MINT:MINT-1392694 STRING:Q9Y6N7 PhosphoSite:Q9Y6N7
DMDM:49036500 PaxDb:Q9Y6N7 PRIDE:Q9Y6N7 Ensembl:ENST00000436010
Ensembl:ENST00000464233 Ensembl:ENST00000495273 GeneID:6091
KEGG:hsa:6091 UCSC:uc003dqb.2 UCSC:uc003dqe.2 CTD:6091
GeneCards:GC03M078729 HGNC:HGNC:10249 HPA:CAB013524 MIM:602430
neXtProt:NX_Q9Y6N7 PharmGKB:PA34620 eggNOG:NOG238978
HOGENOM:HOG000010267 HOVERGEN:HBG073476 InParanoid:Q9Y6N7 KO:K06753
OrthoDB:EOG44QT01 ChiTaRS:ROBO1 EvolutionaryTrace:Q9Y6N7
GenomeRNAi:6091 NextBio:23685 ArrayExpress:Q9Y6N7 Bgee:Q9Y6N7
CleanEx:HS_ROBO1 Genevestigator:Q9Y6N7 GermOnline:ENSG00000169855
GO:GO:0021836 GO:GO:0050925 GO:GO:0035385 Uniprot:Q9Y6N7
Length = 1651
Score = 139 (54.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 48/186 (25%), Positives = 80/186 (43%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S++I V W ++ + I+G I +R + V+ + +N +I L+
Sbjct: 687 SSSSIEVHWT-VDQQSQYIQGYKILYRPS-GANHGESDWLVFEVRTPAKNSVVIPDLRKG 744
Query: 75 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPS 132
Y +K + N +G +SE +T +AP PP V + N T + V+W+
Sbjct: 745 VNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPED 804
Query: 133 FEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
+ + YKV W + + N T+ G+T I L PG RY + V A + G
Sbjct: 805 TQNGMVQEYKV--WCLGNETRYHINKTVD--GSTFSVVIPFLVPGIRYSVEVAASTGAGS 860
Query: 192 GRMSSP 197
G S P
Sbjct: 861 GVKSEP 866
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P +T+Q G E G P L
Sbjct: 944 TPTVTYQRGGEAVSSGGRPGL 964
>UNIPROTKB|F1NDZ4 [details] [associations]
symbol:F1NDZ4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001764 "neuron migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00660000095158 EMBL:AADN02042058 EMBL:AADN02042057
IPI:IPI00589410 Ensembl:ENSGALT00000001379 OMA:GTQGDGS
Uniprot:F1NDZ4
Length = 1213
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 42/132 (31%), Positives = 61/132 (46%)
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
AL+ GL+ Y VKV + GP+S R AP PP AV + G N T+V ++
Sbjct: 600 ALLTGLRRGQDYEVKVRPFYLHLHGPDSAVRALRMPEAAPSAPPRAVSVAG-NGTSVRIS 658
Query: 126 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 185
W+ P+ + I+ Y R+W + + SR + G L + L PG Y V A
Sbjct: 659 WQPPPPAEQNGVILDY--RIWCLGNE-SRFHINQSVEGTVLATVLRGLVPGVPYRAEVAA 715
Query: 186 FSNGGDGRMSSP 197
+ G G S+P
Sbjct: 716 ATGAGVGARSAP 727
>UNIPROTKB|Q91562 [details] [associations]
symbol:dcc "Tumor suppressor" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 CTD:1630 HOVERGEN:HBG005455
KO:K06765 HSSP:Q9UQH9 EMBL:U10986 PIR:I51669 RefSeq:NP_001079254.1
UniGene:Xl.953 ProteinModelPortal:Q91562 SMR:Q91562 IntAct:Q91562
GeneID:378529 KEGG:xla:378529 Xenbase:XB-GENE-5872596
Uniprot:Q91562
Length = 1427
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 17 TAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
T++ ++W+P ++G RL +E N E + Y + GL+ T
Sbjct: 542 TSVLISWDPPAYANGPVQGYRLFCAETFSGREQNIEVDGIVYR---------LEGLRKFT 592
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y ++V+AYN G G SE + T P P V ++ N ++ V+W P +
Sbjct: 593 EYSIRVLAYNRYGPGVSSEEHTVVTLSDVPSAMPQNVSLEVANSRSIKVSWLPPPPGTQN 652
Query: 136 EPIIGYKVRVWEVDQDMSRAN-DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+R + + R +T+ P N L L G +Y +V A + G G
Sbjct: 653 GFITGYKIRHRKTTR---RGELETLEP--NNLWYLFTGLEKGSQYSFQVAAMTVNGTGPS 707
Query: 195 S 195
S
Sbjct: 708 S 708
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 53/199 (26%), Positives = 86/199 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ V NS +I V+W P +N G + G++I++ K E
Sbjct: 621 VPSAMPQNVSLEVANSRSIKVSWLPPPPGTQN--GFITGYKIRHRKTTRRGELETL---E 675
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK---APQKP--PSAVHIK 115
W L GL+ ++Y +V A G GP S+ Y T Q P PS++H++
Sbjct: 676 PNNLWYLFTGLEKGSQYSFQVAAMTVNGTGPSSDWYTAETPENDLDESQVPDQPSSLHVR 735
Query: 116 GINPTTVHVTWRY-VSPSFEEEP-IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
+ T++ ++W ++P+ IIGY V S +T+ I +L
Sbjct: 736 PLT-TSIIMSWTPPLNPNIVVRGYIIGYGVG--------SPYAETVRVDSKQRYYSIENL 786
Query: 174 SPGKRYHMRVLAFSNGGDG 192
P Y + + AF+N G+G
Sbjct: 787 EPSSHYVISLKAFNNAGEG 805
Score = 134 (52.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 49/205 (23%), Positives = 91/205 (44%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + A+ V+W +++ + + I+ W+ ++ Y + T
Sbjct: 825 PMLPPVGVQAVALTHDAVRVSWADNSVLKNQKTTEVRFYTIR-WRTSY-SASSKYKSADT 882
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP 119
T + GL+P+T Y VM S TY AP P + + + P
Sbjct: 883 TSLSHTVTGLKPNTMYEFSVMVTKGRRSSTWSMTAHATTYETAPTSAPKDLTVITRERKP 942
Query: 120 TTVHVTWRYVSPSFEEE-PIIGYKVRVWEVDQDMSRANDTIIPV-GNTLDADIVDLSPGK 177
V V+W+ P E II + + + +D+++ + ++ + G+ L +I+DL+
Sbjct: 943 RAVIVSWQ---PPIEANGKIIDF-ILFYTLDKNLQLDDWIMVTITGDRLTHEILDLNLDT 998
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQ 202
Y+ R+ A + G G +S P ITF+
Sbjct: 999 AYYFRIQARNAKGLGPLSEP-ITFR 1022
>UNIPROTKB|F1NR29 [details] [associations]
symbol:ROBO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR003596 SMART:SM00406
GeneTree:ENSGT00660000095158 EMBL:AADN02042220 EMBL:AADN02042221
EMBL:AADN02042222 EMBL:AADN02042223 EMBL:AADN02042224
EMBL:AADN02042225 EMBL:AADN02042226 EMBL:AADN02042227
EMBL:AADN02042228 EMBL:AADN02042229 EMBL:AADN02042230
IPI:IPI00599053 Ensembl:ENSGALT00000025010 ArrayExpress:F1NR29
Uniprot:F1NR29
Length = 1495
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/189 (26%), Positives = 86/189 (45%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S++I V W ++ + I+G I +R E ++ + T+N +I L+
Sbjct: 533 SSSSIEVHWT-VDQQSQYIQGYKILYRPTP-ASYGESEWLIFEVRTPTKNSVIIPELKKG 590
Query: 75 TKYYVKVMAYNNAGEGPESE----RYLERTYRKAPQKPPSAVHI-KGI-NPTTVHVTWRY 128
Y +K + N +G +SE + LE + AP PP +V + K N T + VTW+
Sbjct: 591 VNYEIKARPFFNEFQGADSEVKFAKTLEEGKQTAPSAPPQSVSVTKNDGNGTAIVVTWQ- 649
Query: 129 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 188
P + + + + +VW + + SR + G+T I L PG RY + V A +
Sbjct: 650 -PPPEDNQNGMVQEYKVWCLGNE-SRYHINRTVDGSTFSVVIPSLVPGIRYSVEVAASTG 707
Query: 189 GGDGRMSSP 197
G G S P
Sbjct: 708 AGPGVKSDP 716
>FB|FBgn0011592 [details] [associations]
symbol:fra "frazzled" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0005042 "netrin receptor
activity" evidence=NAS;TAS] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;NAS;TAS] [GO:0030425 "dendrite" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0070983
"dendrite guidance" evidence=IMP] [GO:0030424 "axon" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048813
"dendrite morphogenesis" evidence=IMP;TAS] [GO:0007432 "salivary
gland boundary specification" evidence=IMP] [GO:0008347 "glial cell
migration" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 EMBL:AE013599 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016199 GO:GO:0008045
InterPro:IPR013098 Pfam:PF07679 GO:GO:0008347
GeneTree:ENSGT00680000099752 GO:GO:0070983 GO:GO:0007432
eggNOG:NOG249790 GO:GO:0005042 RefSeq:NP_523716.2 UniGene:Dm.2428
ProteinModelPortal:A1Z920 SMR:A1Z920 STRING:A1Z920 PaxDb:A1Z920
PRIDE:A1Z920 EnsemblMetazoa:FBtr0087822 GeneID:36377
KEGG:dme:Dmel_CG8581 UCSC:CG8581-RA CTD:36377 FlyBase:FBgn0011592
InParanoid:A1Z920 OMA:YPRTQYN OrthoDB:EOG41ZCRP PhylomeDB:A1Z920
GenomeRNAi:36377 NextBio:798208 Bgee:A1Z920 Uniprot:A1Z920
Length = 1526
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/158 (23%), Positives = 74/158 (46%)
Query: 35 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 94
G ++ +R+ Y + D+ + +Y+ S A++ L+P T Y + V+ +N G G S
Sbjct: 738 GEILKYRVYYSENDSGAD--LYHDSTALE--AVLTELRPHTDYVISVVPFNRNGMGDSSA 793
Query: 95 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 154
+T+ P +PP+ V ++ + +++ V W + I GYK+R + +D +
Sbjct: 794 EIRVKTFSSTPSEPPNNVTLEVTSSSSITVHWEPPAEEDRNGQITGYKIR-YRKFKDAPQ 852
Query: 155 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 192
T P N ++ +L Y +++ A + G G
Sbjct: 853 VKST--PA-NIRYFELSNLDRNAEYQVKIAAMTVNGSG 887
>UNIPROTKB|F1NR30 [details] [associations]
symbol:ROBO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=IEA] [GO:0030275 "LRR domain binding"
evidence=IEA] [GO:0030673 "axolemma" evidence=IEA] [GO:0033600
"negative regulation of mammary gland epithelial cell
proliferation" evidence=IEA] [GO:0035385 "Roundabout signaling
pathway" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0050925 "negative regulation of negative
chemotaxis" evidence=IEA] [GO:0060763 "mammary duct terminal end
bud growth" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 GO:GO:0005737
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0030673 GO:GO:0006919
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 GO:GO:0033600
InterPro:IPR003596 SMART:SM00406 GO:GO:0070100 GO:GO:0050925
GO:GO:0035385 GeneTree:ENSGT00660000095158 EMBL:AADN02042220
EMBL:AADN02042221 EMBL:AADN02042222 EMBL:AADN02042223
EMBL:AADN02042224 EMBL:AADN02042225 EMBL:AADN02042226
EMBL:AADN02042227 EMBL:AADN02042228 EMBL:AADN02042229
EMBL:AADN02042230 IPI:IPI00577221 Ensembl:ENSGALT00000025009
ArrayExpress:F1NR30 Uniprot:F1NR30
Length = 1501
Score = 139 (54.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 51/189 (26%), Positives = 86/189 (45%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S++I V W ++ + I+G I +R E ++ + T+N +I L+
Sbjct: 530 SSSSIEVHWT-VDQQSQYIQGYKILYRPTP-ASYGESEWLIFEVRTPTKNSVIIPELKKG 587
Query: 75 TKYYVKVMAYNNAGEGPESE----RYLERTYRKAPQKPPSAVHI-KGI-NPTTVHVTWRY 128
Y +K + N +G +SE + LE + AP PP +V + K N T + VTW+
Sbjct: 588 VNYEIKARPFFNEFQGADSEVKFAKTLEEGKQTAPSAPPQSVSVTKNDGNGTAIVVTWQ- 646
Query: 129 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 188
P + + + + +VW + + SR + G+T I L PG RY + V A +
Sbjct: 647 -PPPEDNQNGMVQEYKVWCLGNE-SRYHINRTVDGSTFSVVIPSLVPGIRYSVEVAASTG 704
Query: 189 GGDGRMSSP 197
G G S P
Sbjct: 705 AGPGVKSDP 713
Score = 40 (19.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P +T+Q G + G P L
Sbjct: 791 TPTVTYQRGGDAVSSGGRPGL 811
>UNIPROTKB|J3QS93 [details] [associations]
symbol:DCC "Netrin receptor DCC" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098
Pfam:PF07679 EMBL:AC011155 EMBL:AC019239 EMBL:AC021486
EMBL:AC027248 EMBL:AC078999 EMBL:AC090660 EMBL:AC100777
EMBL:AC103949 EMBL:AC110591 EMBL:AC116002 HGNC:HGNC:2701
ProteinModelPortal:J3QS93 Ensembl:ENST00000581580 Uniprot:J3QS93
Length = 1076
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 17 TAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
T+I +TW P ++G RL + KE N E + Y + GL+ T
Sbjct: 197 TSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYK---------LEGLKKFT 247
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y ++ +AYN G G ++ T P PP V ++ +N ++ V+W PS +
Sbjct: 248 EYSLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSW-LPPPSGTQ 306
Query: 136 EPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+R + + +T+ P N L L G +Y +V A + G G
Sbjct: 307 NGFITGYKIRHRKTTRRGEM--ETLEP--NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 362
Query: 195 SS 196
S+
Sbjct: 363 SN 364
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR- 63
AP+ V +S + ++W P + NI+ + + +E + E A+ TT+
Sbjct: 86 APRDVVPVLVSSRFVRLSWRPPAEAKGNIQT----FTVFFSREGDNRERAL----NTTQP 137
Query: 64 -NWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN--P 119
+ L VG L+P+ Y +V+AYN G G ES + ++ + Q P +++ ++ P
Sbjct: 138 GSLQLTVGNLKPEAMYTFRVVAYNEWGPG-ESSQPIKVATQPELQVPGPVENLQAVSTSP 196
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ +TW P++ P+ GY++ EV S + I V L + L Y
Sbjct: 197 TSILITWE--PPAYANGPVQGYRLFCTEV----STGKEQNIEVDG-LSYKLEGLKKFTEY 249
Query: 180 HMRVLAFSNGGDGRMSSPAIT 200
+R LA++ G G +S+ IT
Sbjct: 250 SLRFLAYNRYGPG-VSTDDIT 269
Score = 128 (50.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 53/205 (25%), Positives = 86/205 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW--NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
P + P GV + A+ V+W N + ++ RL R W+ +A Y
Sbjct: 478 PMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVR---WRTSF-SASAKYKSE 533
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI---KG 116
TT GL+P+T Y VM N S TY AP P + + +G
Sbjct: 534 DTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREG 593
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV--GNTLDADIVDLS 174
P V V+W+ P E I + + +D+++ +D I+ G+ L I+DL+
Sbjct: 594 -KPRAVIVSWQ---PPLEANGKITAYILFYTLDKNIP-IDDWIMETISGDRLTHQIMDLN 648
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAI 199
Y+ R+ A ++ G G +S P +
Sbjct: 649 LDTMYYFRIQARNSKGVGPLSDPIL 673
Score = 115 (45.5 bits), Expect = 0.00090, P = 0.00090
Identities = 49/197 (24%), Positives = 78/197 (39%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P PQ V NS +I V+W P +N G + G++I++ K E
Sbjct: 276 VPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQN--GFITGYKIRHRKTTRRGEMETL---E 330
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK---APQKP--PSAVHIK 115
W L GL+ ++Y +V A G GP S Y T Q P PS++H++
Sbjct: 331 PNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPENDLDESQVPDQPSSLHVR 390
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 175
P T + + P + GY + + V + +T+ I L
Sbjct: 391 ---PQTNCIIMSWTPPLNPNIVVRGYIIG-YGVGSPYA---ETVRVDSKQRYYSIERLES 443
Query: 176 GKRYHMRVLAFSNGGDG 192
Y + + AF+N G+G
Sbjct: 444 SSHYVISLKAFNNAGEG 460
>UNIPROTKB|H0YNQ1 [details] [associations]
symbol:IGDCC3 "Immunoglobulin superfamily DCC subclass
member 3" species:9606 "Homo sapiens" [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0050885
InterPro:IPR013098 Pfam:PF07679 EMBL:AC105129 HGNC:HGNC:9700
Ensembl:ENST00000558354 Bgee:H0YNQ1 Uniprot:H0YNQ1
Length = 535
Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 48/204 (23%), Positives = 91/204 (44%)
Query: 6 PQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRTTR 63
P+ V + +ST + V+W+ P+ +E +IG+ + K +P E +S++T
Sbjct: 290 PRNVRAVSVSSTEVRVSWSEPLANTKE-----IIGYVLHIRKAADPPELEYQEAVSKSTF 344
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
L+ L+P T Y + AY G S L T +AP PP +V + G +++
Sbjct: 345 QH-LVSDLEPSTAYSFYIKAYTPRGASSASVPTLASTLGEAPAPPPLSVRVLG--SSSLQ 401
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
+ W + E G+K+ + S ++P G ++ L P Y +++
Sbjct: 402 LLWEPWPRLAQHEG--GFKL-FYRPASKTSFTGPILLP-GTVSSYNLSQLDPTAVYEVKL 457
Query: 184 LAFSNGGDGRMSSPAITFQMGEEK 207
LA++ GDG + ++ + E+
Sbjct: 458 LAYNQHGDGNATVRFVSLRGASER 481
>UNIPROTKB|J9P5P0 [details] [associations]
symbol:DCC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR010560
Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00680000099752 EMBL:AAEX03000148
Ensembl:ENSCAFT00000045423 Uniprot:J9P5P0
Length = 1293
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 17 TAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
T+I +TW P ++G RL + KE N E + Y + GL+ T
Sbjct: 390 TSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYK---------LEGLKKFT 440
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y ++ +AYN G G ++ T P PP V ++ +N ++ V+W PS +
Sbjct: 441 EYTLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSW-LPPPSGTQ 499
Query: 136 EPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+R + + +T+ P N L L G +Y +V A + G G
Sbjct: 500 NGFITGYKIRHRKTTRRGEM--ETLEP--NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 555
Query: 195 SS 196
S+
Sbjct: 556 SN 557
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
AP+ V +S + ++W P + NI+ + + +E + E A+ + +
Sbjct: 279 APRDVVPVLVSSRFVRLSWRPPAEAKGNIQT----FTVFFSREGDNRERALN--TSQPGS 332
Query: 65 WALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP-SAVHIKGINPTTV 122
L VG L+P+ Y +V+AYN G G S+ T + P +H +PT++
Sbjct: 333 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLHAVSTSPTSI 392
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 182
+TW P++ P+ GY++ EV S + I V L + L Y +R
Sbjct: 393 LITWE--PPAYANGPVQGYRLFCTEV----STGKEQNIEVDG-LSYKLEGLKKFTEYTLR 445
Query: 183 VLAFSNGGDGRMSSPAIT 200
LA++ G G +S+ IT
Sbjct: 446 FLAYNRYGPG-VSTDDIT 462
Score = 126 (49.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 52/205 (25%), Positives = 85/205 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW--NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
P + P GV + A+ V+W N + ++ RL R W+ A Y
Sbjct: 691 PMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVR---WRTSF-SANAKYKSE 746
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI---KG 116
TT GL+P+T Y VM N S TY AP P + + +G
Sbjct: 747 DTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREG 806
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV--GNTLDADIVDLS 174
P V V+W+ P E I + + +D+++ +D ++ G+ L I+DL+
Sbjct: 807 -KPRAVIVSWQ---PPLEANGKITAYILFYTLDKNIP-IDDWVMETISGDRLTHQIMDLN 861
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAI 199
Y+ R+ A ++ G G +S P +
Sbjct: 862 LDTMYYFRIQARNSKGVGPLSDPIL 886
>ZFIN|ZDB-GENE-980526-512 [details] [associations]
symbol:nadl1.1 "neural adhesion molecule L1.1"
species:7955 "Danio rerio" [GO:0031103 "axon regeneration"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-980526-512 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
GO:GO:0031103 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 EMBL:BX323461 IPI:IPI00773334
ProteinModelPortal:F1R5A9 Ensembl:ENSDART00000132175
ArrayExpress:F1R5A9 Bgee:F1R5A9 Uniprot:F1R5A9
Length = 1332
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 53/210 (25%), Positives = 92/210 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP + T++ V W+P+ E++RG L+G++I Y + P S
Sbjct: 878 PLEAPSALSVTELQKTSVMVRWSPVR--PESVRGHLLGYKI-YLRMKGPSGRLRAGRSPA 934
Query: 62 TRNWALIV-------GLQPDTKYY----VKVMAYNNAGEGPESERYLERTYRKAPQKPPS 110
N +I + D +YY + + A+N+ GEGP SE E ++ P
Sbjct: 935 VGNPTVIEVPADAAEKIVSDLQYYSDYTLTITAFNSKGEGPHSE---ESSFSTPEGAPGP 991
Query: 111 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDAD 169
+ + +P+ +T R+ +P I GY ++ EV S + I + +
Sbjct: 992 VLFLPFDSPSESEITLRWEAPHKPNGEIRGYLLQYQEVVTGSESPQHVESIDLPAVTEFT 1051
Query: 170 IVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 199
+ +L+P RY + A ++ GDG +PAI
Sbjct: 1052 LKNLNPESRYTFHLSARNSAGDG---APAI 1078
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/201 (21%), Positives = 87/201 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P P+ V + + ++ ++W E+ R G +++ +W+ ++ ++ +
Sbjct: 779 PDTNPENVMTLSTDPKSMIISWQ--EMDRRQFNGPGFQYKV-FWRR--AADSGAHWTESS 833
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
N L+V + +KV A N+ G PE + + P + PSA+ + + T
Sbjct: 834 VSNPPLMVNNTGTFVSFEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTELQKT 893
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMSRA-------NDTIIPV-GNTLDADIV 171
+V V W V P ++GYK+ + + RA N T+I V + + +
Sbjct: 894 SVMVRWSPVRPESVRGHLLGYKIYLRMKGPSGRLRAGRSPAVGNPTVIEVPADAAEKIVS 953
Query: 172 DLSPGKRYHMRVLAFSNGGDG 192
DL Y + + AF++ G+G
Sbjct: 954 DLQYYSDYTLTITAFNSKGEG 974
>UNIPROTKB|E2R4Z0 [details] [associations]
symbol:ROBO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0007411
GO:GO:0001764 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098
Pfam:PF07679 OMA:PQLVTQP GeneTree:ENSGT00660000095158
EMBL:AAEX03003393 Ensembl:ENSCAFT00000017695 Uniprot:E2R4Z0
Length = 1386
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 55/203 (27%), Positives = 91/203 (44%)
Query: 19 INVTWN---PIELIRENIRGRLIGHRIKYWKEDNPE--ETAVYYLSRTTRNWALIVGLQP 73
+ V+W P++L++ G R+ W+ P+ V L ++ ++ GL P
Sbjct: 687 LQVSWTVDGPVQLVQ--------GFRVS-WRVAGPDGGSWTVLDLQSPSQQSTVLRGLPP 737
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRK--APQKPPSAVHIK--GINPTTVHVTWRYV 129
T+ +KV A G GPES ++ R+ + AP PP V + G ++V V+W
Sbjct: 738 GTQIQIKVQAQGQEGLGPESP-FVTRSIPEEAAPSGPPQGVTVALGGEGNSSVTVSWEPP 796
Query: 130 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 189
PS + I Y++ W + + SR + G A + L PG Y RV A ++
Sbjct: 797 LPSQQNGVIKEYQI--WCLGNE-SRFHLNRSAAGWARSAVLRGLLPGLLYRTRVAAATSA 853
Query: 190 GDGRMSSPAITFQMGEEKEFKSG 212
G G S P ++ Q+ E + G
Sbjct: 854 GVGVASVP-VSVQLPSPPESEPG 875
>UNIPROTKB|F1PAZ4 [details] [associations]
symbol:DCC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021965 "spinal
cord ventral commissure morphogenesis" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 GO:GO:0001764
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00680000099752
OMA:WGPGESS GO:GO:0033563 GO:GO:0021965 EMBL:AAEX03000148
Ensembl:ENSCAFT00000000254 Uniprot:F1PAZ4
Length = 1419
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 17 TAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
T+I +TW P ++G RL + KE N E + Y + GL+ T
Sbjct: 514 TSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYK---------LEGLKKFT 564
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y ++ +AYN G G ++ T P PP V ++ +N ++ V+W PS +
Sbjct: 565 EYTLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSW-LPPPSGTQ 623
Query: 136 EPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+R + + +T+ P N L L G +Y +V A + G G
Sbjct: 624 NGFITGYKIRHRKTTRRGEM--ETLEP--NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 679
Query: 195 SS 196
S+
Sbjct: 680 SN 681
Score = 127 (49.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
AP+ V +S + ++W P + NI+ + + +E + E A+ + +
Sbjct: 403 APRDVVPVLVSSRFVRLSWRPPAEAKGNIQT----FTVFFSREGDNRERALN--TSQPGS 456
Query: 65 WALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP-SAVHIKGINPTTV 122
L VG L+P+ Y +V+AYN G G S+ T + P +H +PT++
Sbjct: 457 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLHAVSTSPTSI 516
Query: 123 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 182
+TW P++ P+ GY++ EV S + I V L + L Y +R
Sbjct: 517 LITWE--PPAYANGPVQGYRLFCTEV----STGKEQNIEVDG-LSYKLEGLKKFTEYTLR 569
Query: 183 VLAFSNGGDGRMSSPAIT 200
LA++ G G +S+ IT
Sbjct: 570 FLAYNRYGPG-VSTDDIT 586
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 52/205 (25%), Positives = 85/205 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW--NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
P + P GV + A+ V+W N + ++ RL R W+ A Y
Sbjct: 815 PMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVR---WRTSF-SANAKYKSE 870
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI---KG 116
TT GL+P+T Y VM N S TY AP P + + +G
Sbjct: 871 DTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREG 930
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV--GNTLDADIVDLS 174
P V V+W+ P E I + + +D+++ +D ++ G+ L I+DL+
Sbjct: 931 -KPRAVIVSWQ---PPLEANGKITAYILFYTLDKNIP-IDDWVMETISGDRLTHQIMDLN 985
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAI 199
Y+ R+ A ++ G G +S P +
Sbjct: 986 LDTMYYFRIQARNSKGVGPLSDPIL 1010
>ZFIN|ZDB-GENE-011101-2 [details] [associations]
symbol:dcc "deleted in colorectal carcinoma"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0033564 "anterior/posterior axon
guidance" evidence=IGI] [GO:0038006 "netrin receptor activity
involved in chemoattraction" evidence=IGI] [GO:0048665 "neuron fate
specification" evidence=IMP] [GO:0016358 "dendrite development"
evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR009138 InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583
PRINTS:PR01838 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
ZFIN:ZDB-GENE-011101-2 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0007155
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048665 CTD:1630
HOVERGEN:HBG005455 KO:K06765 GO:GO:0033564 EMBL:AY956314
EMBL:CU638816 IPI:IPI00619033 RefSeq:NP_001030157.1
UniGene:Dr.121163 SMR:Q49BB0 GeneID:569360 KEGG:dre:569360
NextBio:20889639 GO:GO:0038006 Uniprot:Q49BB0
Length = 1421
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 54/211 (25%), Positives = 91/211 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP-EETAVYYLS 59
+P PQ V S +I V+W P +N G + G++I+Y K E+ A+
Sbjct: 617 VPSSPPQNVSLEVVYSRSIKVSWQPPPANTQN--GFITGYKIRYRKTGRRGEQEAI---- 670
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK---APQKP--PSAVHI 114
W L GL+ ++Y +V G GP SE T Q P PS++H+
Sbjct: 671 EPNNLWYLFTGLEKGSQYSFQVSGMTVNGTGPSSEWLTAETPENDLDESQVPHQPSSLHV 730
Query: 115 KGINPTTVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 173
+ + P ++ ++W +P +I GY + + V ++ T+ I +L
Sbjct: 731 RPL-PNSIIMSW---TPPLNPNTLIRGYTIG-YGVGSPYAQ---TVRVDSKQRYYSIENL 782
Query: 174 SPGKRYHMRVLAFSNGGDG-RMSSPAITFQM 203
P Y + + AF+N G+G + A+T M
Sbjct: 783 EPSSHYVISLKAFNNAGEGVPLYESAVTRSM 813
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 44/189 (23%), Positives = 81/189 (42%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
AP+ V +S + ++W P E RG ++ + + Y +E E +V +
Sbjct: 427 APRDVAPVLVSSRFVRLSWRP----PEEPRGPILTYGVFYSEEGINRERSVNVTEAESLQ 482
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKA-PQKPPSAVHIKGINPTTVH 123
+ L+P+ Y +V+AYN G G SE T + P + + ++PT++
Sbjct: 483 LT-VSNLRPEASYSFRVLAYNEQGPGESSEAIRLSTQAELLVPGPVENLQAEAVSPTSIQ 541
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
+W +P+ P+ Y++ +W + S + VG + + L Y +RV
Sbjct: 542 ASWDPPAPA--NGPVQSYRL-LWT--ETSSGKEQNVEVVGQSYRME--GLKKFTEYSLRV 594
Query: 184 LAFSNGGDG 192
LA + G G
Sbjct: 595 LAVNRHGPG 603
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 43/200 (21%), Positives = 86/200 (43%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P + P GV + S ++ V+W + + + + +K W+ + + + + T
Sbjct: 820 PMIPPVGVQAVALTSDSVRVSWADNSIPKNQKSSEVRYYSVK-WRTSH-STSGKHKSADT 877
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN--P 119
T + GL+P+T Y VM S TY AP P + + G P
Sbjct: 878 TALSHTVTGLKPNTMYEFSVMVTKGRKSSTWSMTAHATTYEAAPSSAPKDLTVIGREGRP 937
Query: 120 TTVHVTWRYVSPSFEEEP-IIGYKVRVWEVDQDMSRANDTIIPV-GNTLDADIVDLSPGK 177
+ ++W+ P E I G+ + + +++++ + + P+ G+ L ++DL+
Sbjct: 938 RAILISWQ---PPLEANGRITGF-ILYYTLEKNLPIDDWVMEPISGDRLTHQVLDLNLDT 993
Query: 178 RYHMRVLAFSNGGDGRMSSP 197
Y+ R+ A + G G +S P
Sbjct: 994 VYYFRIQAKNAKGVGPLSDP 1013
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 47/198 (23%), Positives = 87/198 (43%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
T+I +W+P G + +R+ + + + +E V + ++ R + GL+ T+
Sbjct: 538 TSIQASWDP----PAPANGPVQSYRLLWTETSSGKEQNVEVVGQSYR----MEGLKKFTE 589
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 136
Y ++V+A N G G + L T P PP V ++ + ++ V+W+ + +
Sbjct: 590 YSLRVLAVNRHGPGVSDKDTLITTLSDVPSSPPQNVSLEVVYSRSIKVSWQPPPANTQNG 649
Query: 137 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 196
I GYK+R + + + + I P N L L G +Y +V + G G SS
Sbjct: 650 FITGYKIRYRKTGRRGEQ--EAIEP--NNLWYLFTGLEKGSQYSFQVSGMTVNGTGP-SS 704
Query: 197 PAITFQMGEEKEFKSGSP 214
+T + E +S P
Sbjct: 705 EWLTAETPENDLDESQVP 722
>UNIPROTKB|F1LRN5 [details] [associations]
symbol:Dcc "Netrin receptor DCC" species:10116 "Rattus
norvegicus" [GO:0001764 "neuron migration" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0021965
"spinal cord ventral commissure morphogenesis" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:2492 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00680000099752
IPI:IPI00949438 Ensembl:ENSRNOT00000064947 ArrayExpress:F1LRN5
Uniprot:F1LRN5
Length = 1426
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 17 TAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
T+I +TW P ++G RL + KE N E + Y + GL+ T
Sbjct: 523 TSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYK---------LEGLKKFT 573
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y ++ +AYN G G ++ T P PP V ++ +N ++ V+W PS +
Sbjct: 574 EYTLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSW-LPPPSGTQ 632
Query: 136 EPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+R + + +T+ P N L L G +Y +V A + G G
Sbjct: 633 NGFITGYKIRHRKTTRRGEM--ETLEP--NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 688
Query: 195 SS 196
S+
Sbjct: 689 SN 690
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 53/200 (26%), Positives = 90/200 (45%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR- 63
AP+ V +S + ++W P + NI+ + + +E + E A+ TT+
Sbjct: 412 APRDVVPVLVSSRFVRLSWRPPAEAKGNIQT----FTVFFSREGDNRERAL----NTTQP 463
Query: 64 -NWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP-SAVHIKGINPT 120
+ L VG L+P+ Y +V+AYN G G S+ T + P +H +PT
Sbjct: 464 GSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLHAVSASPT 523
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ +TW P++ P+ GY++ EV S + I V L + L Y
Sbjct: 524 SILITWE--PPAYANGPVQGYRLFCTEV----STGKEQNIEVDG-LSYKLEGLKKFTEYT 576
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+R LA++ G G +S+ IT
Sbjct: 577 LRFLAYNRYGPG-VSTDDIT 595
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 54/205 (26%), Positives = 85/205 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW--NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
P + P GV + A+ V+W N + ++ RL R W+ +A Y
Sbjct: 824 PMLPPVGVQAVALTHEAVRVSWADNSVPKNQKTSDVRLYTVR---WRTSF-SASAKYKSE 879
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI---KG 116
TT GL+P+T Y VM N S TY AP P + + +G
Sbjct: 880 DTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREG 939
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV--GNTLDADIVDLS 174
P V V+W+ P E I + + +D+++ +D I+ G+ L I+DLS
Sbjct: 940 -KPRAVIVSWQ---PPLEANGKITAYILFYTLDKNIP-IDDWIMETISGDRLTHQIMDLS 994
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAI 199
Y+ R+ A + G G +S P +
Sbjct: 995 LDTMYYFRIQARNAKGVGPLSDPIL 1019
>RGD|2492 [details] [associations]
symbol:Dcc "deleted in colorectal carcinoma" species:10116 "Rattus
norvegicus" [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEP] [GO:0003713
"transcription coactivator activity" evidence=IMP] [GO:0005042
"netrin receptor activity" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0010976 "positive regulation of neuron
projection development" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021965 "spinal cord ventral commissure
morphogenesis" evidence=IEA;ISO] [GO:0030424 "axon" evidence=ISO;IDA]
[GO:0032584 "growth cone membrane" evidence=IDA] [GO:0033563
"dorsal/ventral axon guidance" evidence=IEA;ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0038007
"netrin-activated signaling pathway" evidence=IMP] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0045121 "membrane raft"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 RGD:2492 GO:GO:0016021 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0010976 GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0070374
GO:GO:0001975 GO:GO:0045121 Reactome:REACT_127416 GO:GO:0003713
Reactome:REACT_96538 EMBL:CH473971 InterPro:IPR013098 Pfam:PF07679
CTD:1630 HOGENOM:HOG000230686 HOVERGEN:HBG005455 KO:K06765
GO:GO:0032584 GO:GO:0005042 GO:GO:0033563 GO:GO:0021965 EMBL:U68725
IPI:IPI00205910 RefSeq:NP_036973.1 UniGene:Rn.10666 PDB:3LAF PDB:3O71
PDBsum:3LAF PDBsum:3O71 ProteinModelPortal:Q63155 SMR:Q63155
DIP:DIP-46811N IntAct:Q63155 STRING:Q63155 PhosphoSite:Q63155
PRIDE:Q63155 Ensembl:ENSRNOT00000045408 GeneID:25311 KEGG:rno:25311
InParanoid:Q63155 EvolutionaryTrace:Q63155 NextBio:606123
ArrayExpress:Q63155 Genevestigator:Q63155 Uniprot:Q63155
Length = 1445
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 17 TAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
T+I +TW P ++G RL + KE N E + Y + GL+ T
Sbjct: 542 TSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYK---------LEGLKKFT 592
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y ++ +AYN G G ++ T P PP V ++ +N ++ V+W PS +
Sbjct: 593 EYTLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSW-LPPPSGTQ 651
Query: 136 EPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+R + + +T+ P N L L G +Y +V A + G G
Sbjct: 652 NGFITGYKIRHRKTTRRGEM--ETLEP--NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 707
Query: 195 SS 196
S+
Sbjct: 708 SN 709
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 53/200 (26%), Positives = 90/200 (45%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR- 63
AP+ V +S + ++W P + NI+ + + +E + E A+ TT+
Sbjct: 431 APRDVVPVLVSSRFVRLSWRPPAEAKGNIQT----FTVFFSREGDNRERAL----NTTQP 482
Query: 64 -NWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP-SAVHIKGINPT 120
+ L VG L+P+ Y +V+AYN G G S+ T + P +H +PT
Sbjct: 483 GSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLHAVSASPT 542
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ +TW P++ P+ GY++ EV S + I V L + L Y
Sbjct: 543 SILITWE--PPAYANGPVQGYRLFCTEV----STGKEQNIEVDG-LSYKLEGLKKFTEYT 595
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+R LA++ G G +S+ IT
Sbjct: 596 LRFLAYNRYGPG-VSTDDIT 614
Score = 126 (49.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 54/205 (26%), Positives = 85/205 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW--NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
P + P GV + A+ V+W N + ++ RL R W+ +A Y
Sbjct: 843 PMLPPVGVQAVALTHEAVRVSWADNSVPKNQKTSDVRLYTVR---WRTSF-SASAKYKSE 898
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI---KG 116
TT GL+P+T Y VM N S TY AP P + + +G
Sbjct: 899 DTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREG 958
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV--GNTLDADIVDLS 174
P V V+W+ P E I + + +D+++ +D I+ G+ L I+DLS
Sbjct: 959 -KPRAVIVSWQ---PPLEANGKITAYILFYTLDKNIP-IDDWIMETISGDRLTHQIMDLS 1013
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAI 199
Y+ R+ A + G G +S P +
Sbjct: 1014 LDTMYYFRIQARNAKGVGPLSDPIL 1038
>UNIPROTKB|P43146 [details] [associations]
symbol:DCC "Netrin receptor DCC" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001975 "response
to amphetamine" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0005042 "netrin receptor
activity" evidence=IEA] [GO:0010976 "positive regulation of neuron
projection development" evidence=IEA] [GO:0021965 "spinal cord
ventral commissure morphogenesis" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0032584 "growth cone membrane" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0070374 "positive regulation of
ERK1 and ERK2 cascade" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007409 "axonogenesis" evidence=TAS] [GO:0004888
"transmembrane signaling receptor activity" evidence=TAS]
[GO:0006917 "induction of apoptosis" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0042981 "regulation of apoptotic
process" evidence=TAS] [GO:0010977 "negative regulation of neuron
projection development" evidence=TAS] [GO:0048671 "negative
regulation of collateral sprouting" evidence=TAS] [GO:2000171
"negative regulation of dendrite development" evidence=TAS]
Reactome:REACT_578 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 GO:GO:0005829
GO:GO:0005886 Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411
GO:GO:0001764 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0010976
GO:GO:0006917 GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0070374
GO:GO:0001975 GO:GO:0045121 GO:GO:0003713 Reactome:REACT_111155
InterPro:IPR013098 Pfam:PF07679 GO:GO:0004888 MEROPS:I43.001
GO:GO:0048671 GO:GO:2000171 EMBL:X76132 EMBL:AC011155 EMBL:AC016383
EMBL:AC019239 EMBL:AC021486 EMBL:AC027248 EMBL:AC078999
EMBL:AC090660 EMBL:AC100777 EMBL:AC103949 EMBL:AC110591
EMBL:AC116002 EMBL:M32292 EMBL:M32286 EMBL:M32288 EMBL:M32290
EMBL:M63696 EMBL:M63700 EMBL:M63702 EMBL:M63718 EMBL:M63698
IPI:IPI00016422 PIR:A54100 RefSeq:NP_005206.2 UniGene:Hs.162025
PDB:2ED7 PDB:2ED8 PDB:2ED9 PDB:2EDB PDB:2EDD PDB:2EDE PDB:3AU4
PDBsum:2ED7 PDBsum:2ED8 PDBsum:2ED9 PDBsum:2EDB PDBsum:2EDD
PDBsum:2EDE PDBsum:3AU4 ProteinModelPortal:P43146 SMR:P43146
DIP:DIP-38423N IntAct:P43146 STRING:P43146 PhosphoSite:P43146
DMDM:296434474 PaxDb:P43146 PRIDE:P43146 DNASU:1630
Ensembl:ENST00000442544 GeneID:1630 KEGG:hsa:1630 UCSC:uc002lfe.2
CTD:1630 GeneCards:GC18P049802 H-InvDB:HIX0039754 HGNC:HGNC:2701
HPA:CAB002311 MIM:120470 MIM:157600 neXtProt:NX_P43146
Orphanet:238722 PharmGKB:PA27170 eggNOG:NOG249790
HOGENOM:HOG000230686 HOVERGEN:HBG005455 InParanoid:P43146 KO:K06765
OMA:WGPGESS OrthoDB:EOG4WM4SV PhylomeDB:P43146
EvolutionaryTrace:P43146 GenomeRNAi:1630 NextBio:6688
ArrayExpress:P43146 Bgee:P43146 CleanEx:HS_DCC
Genevestigator:P43146 GermOnline:ENSG00000187323 GO:GO:0032584
GO:GO:0005042 GO:GO:0033563 GO:GO:0038007 GO:GO:0021965
Uniprot:P43146
Length = 1447
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 17 TAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
T+I +TW P ++G RL + KE N E + Y + GL+ T
Sbjct: 542 TSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYK---------LEGLKKFT 592
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y ++ +AYN G G ++ T P PP V ++ +N ++ V+W PS +
Sbjct: 593 EYSLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSW-LPPPSGTQ 651
Query: 136 EPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+R + + +T+ P N L L G +Y +V A + G G
Sbjct: 652 NGFITGYKIRHRKTTRRGEM--ETLEP--NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 707
Query: 195 SS 196
S+
Sbjct: 708 SN 709
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR- 63
AP+ V +S + ++W P + NI+ + + +E + E A+ TT+
Sbjct: 431 APRDVVPVLVSSRFVRLSWRPPAEAKGNIQT----FTVFFSREGDNRERAL----NTTQP 482
Query: 64 -NWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN--P 119
+ L VG L+P+ Y +V+AYN G G ES + ++ + Q P +++ ++ P
Sbjct: 483 GSLQLTVGNLKPEAMYTFRVVAYNEWGPG-ESSQPIKVATQPELQVPGPVENLQAVSTSP 541
Query: 120 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
T++ +TW P++ P+ GY++ EV S + I V L + L Y
Sbjct: 542 TSILITWE--PPAYANGPVQGYRLFCTEV----STGKEQNIEVDG-LSYKLEGLKKFTEY 594
Query: 180 HMRVLAFSNGGDGRMSSPAIT 200
+R LA++ G G +S+ IT
Sbjct: 595 SLRFLAYNRYGPG-VSTDDIT 614
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 53/205 (25%), Positives = 86/205 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW--NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
P + P GV + A+ V+W N + ++ RL R W+ +A Y
Sbjct: 843 PMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVR---WRTSF-SASAKYKSE 898
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI---KG 116
TT GL+P+T Y VM N S TY AP P + + +G
Sbjct: 899 DTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREG 958
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV--GNTLDADIVDLS 174
P V V+W+ P E I + + +D+++ +D I+ G+ L I+DL+
Sbjct: 959 -KPRAVIVSWQ---PPLEANGKITAYILFYTLDKNIP-IDDWIMETISGDRLTHQIMDLN 1013
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAI 199
Y+ R+ A ++ G G +S P +
Sbjct: 1014 LDTMYYFRIQARNSKGVGPLSDPIL 1038
>MGI|MGI:94869 [details] [associations]
symbol:Dcc "deleted in colorectal carcinoma" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0005042 "netrin receptor activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO] [GO:0010976
"positive regulation of neuron projection development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021965 "spinal cord
ventral commissure morphogenesis" evidence=IMP] [GO:0030424 "axon"
evidence=ISO;IDA] [GO:0032584 "growth cone membrane" evidence=ISO]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IMP]
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0038007 "netrin-activated signaling pathway" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0045121
"membrane raft" evidence=ISO] [GO:0070374 "positive regulation of
ERK1 and ERK2 cascade" evidence=ISO] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR010560 Pfam:PF00041 Pfam:PF06583
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 MGI:MGI:94869
GO:GO:0016021 GO:GO:0005886 GO:GO:0006915 GO:GO:0001764
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:CH466528 GO:GO:0030424
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 Reactome:REACT_127416 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00680000099752 Reactome:REACT_137402 CTD:1630
eggNOG:NOG249790 HOGENOM:HOG000230686 HOVERGEN:HBG005455 KO:K06765
OMA:WGPGESS OrthoDB:EOG4WM4SV GO:GO:0033563 GO:GO:0021965
EMBL:X85788 EMBL:AC105957 EMBL:AC107230 EMBL:AC109179 EMBL:AC109499
EMBL:AC121523 EMBL:AC136637 EMBL:AC161177 EMBL:AC163492
EMBL:AC167547 EMBL:AC167548 EMBL:AC167549 IPI:IPI00137347
IPI:IPI00225034 IPI:IPI00759859 RefSeq:NP_031857.2
UniGene:Mm.167882 PDB:3PZD PDBsum:3PZD ProteinModelPortal:P70211
IntAct:P70211 STRING:P70211 PhosphoSite:P70211 PRIDE:P70211
Ensembl:ENSMUST00000073379 Ensembl:ENSMUST00000114943 GeneID:13176
KEGG:mmu:13176 UCSC:uc008fop.1 UCSC:uc008foq.1 InParanoid:P70211
NextBio:283280 CleanEx:MM_DCC Genevestigator:P70211
GermOnline:ENSMUSG00000060534 Uniprot:P70211
Length = 1447
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 48/182 (26%), Positives = 79/182 (43%)
Query: 17 TAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 75
T+I +TW P ++G RL + KE N E + Y + GL+ T
Sbjct: 542 TSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYK---------LEGLKKFT 592
Query: 76 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 135
+Y ++ +AYN G G ++ T P PP + ++ +N ++ V+W PS +
Sbjct: 593 EYTLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNISLEVVNSRSIKVSW-LPPPSGTQ 651
Query: 136 EPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 194
I GYK+R + + +T+ P N L L G +Y +V A + G G
Sbjct: 652 NGFITGYKIRHRKTTRRGEM--ETLEP--NNLWYLFTGLEKGSQYSFQVSAMTVNGTGPP 707
Query: 195 SS 196
S+
Sbjct: 708 SN 709
Score = 130 (50.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 53/200 (26%), Positives = 90/200 (45%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR- 63
AP+ V +S + ++W P + NI+ + + +E + E A+ TT+
Sbjct: 431 APRDVLPVLVSSRFVRLSWRPPAEAKGNIQT----FTVFFSREGDNRERAL----NTTQP 482
Query: 64 -NWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP-SAVHIKGINPT 120
+ L VG L+P+ Y +V+AYN G G S+ T + P +H +PT
Sbjct: 483 GSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLHAVSTSPT 542
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 180
++ +TW P++ P+ GY++ EV S + I V L + L Y
Sbjct: 543 SILITWE--PPAYANGPVQGYRLFCTEV----STGKEQNIEVDG-LSYKLEGLKKFTEYT 595
Query: 181 MRVLAFSNGGDGRMSSPAIT 200
+R LA++ G G +S+ IT
Sbjct: 596 LRFLAYNRYGPG-VSTDDIT 614
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 54/205 (26%), Positives = 85/205 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTW--NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 59
P + P GV + A+ V+W N + ++ RL R W+ +A Y
Sbjct: 843 PMLPPVGVQAVALTHEAVRVSWADNSVPKNQKTSDVRLYTVR---WRTSF-SASAKYKSE 898
Query: 60 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI---KG 116
TT GL+P+T Y VM N S TY AP P + + +G
Sbjct: 899 DTTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREG 958
Query: 117 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV--GNTLDADIVDLS 174
P V V+W+ P E I + + +D+++ +D I+ G+ L I+DLS
Sbjct: 959 -KPRAVIVSWQ---PPLEANGKITAYILFYTLDKNIP-IDDWIMETISGDRLTHQIMDLS 1013
Query: 175 PGKRYHMRVLAFSNGGDGRMSSPAI 199
Y+ R+ A + G G +S P +
Sbjct: 1014 LDTMYYFRIQARNVKGVGPLSDPIL 1038
>WB|WBGene00002915 [details] [associations]
symbol:let-805 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0030056
"hemidesmosome" evidence=IDA] InterPro:IPR003961 Pfam:PF00041
PROSITE:PS50853 SMART:SM00060 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0002119
GO:GO:0018996 SUPFAM:SSF49265 GO:GO:0040011 GO:GO:0000003
GO:GO:0030056 GeneTree:ENSGT00530000063598 EMBL:FO081555
UniGene:Cel.19573 GeneID:175384 KEGG:cel:CELE_H19M22.2 CTD:175384
UCSC:H19M22.2d NextBio:887930 HSSP:Q96KP7 EMBL:AF148953 PIR:C88400
PIR:T32828 RefSeq:NP_001022641.1 ProteinModelPortal:Q9UB28
SMR:Q9UB28 IntAct:Q9UB28 MINT:MINT-1115902 PRIDE:Q9UB28
EnsemblMetazoa:H19M22.2b WormBase:H19M22.2b HOGENOM:HOG000019062
InParanoid:Q9UB28 OMA:KHRLACP ArrayExpress:Q9UB28 Uniprot:Q9UB28
Length = 4450
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 50/194 (25%), Positives = 83/194 (42%)
Query: 7 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 66
+G+ ++ T+I W P I G + +++K E P + + + +N
Sbjct: 2526 EGLTAKPTGPTSIVARWKPPRDPNGVITGYTLTYQLKSIGECGPRSSTP--IEKHVKNEE 2583
Query: 67 -LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
+ GL PD+ Y + V+A+ + GP+S T AP PP V + + +T
Sbjct: 2584 ETLEGLLPDSTYEIHVVAHTSHA-GPQSSVVTVTTEEAAPTGPPQNVRAGSVTSSRADIT 2642
Query: 126 WRYVSPSFEEE--PIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
W P E+ I Y+ +W +D D S ++ P L+ D L P +Y +
Sbjct: 2643 W--TQPECEQRNGKITDYEYELWSMDTWADNSTGHN---PT-ERLNLD--QLIPYTQYQI 2694
Query: 182 RVLAFSNGGDGRMS 195
RV A + GDG S
Sbjct: 2695 RVRAINKEGDGPFS 2708
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
I GL P +KY V V A +N G G ++ T + AP P + + I PT V ++W+
Sbjct: 1362 ITGLHPHSKYRVGVAAKSNVGAGERVSLEIQ-TDQAAPSGAPLYLRTEDIRPTDVSISWQ 1420
Query: 128 YVSPSFEEE-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 186
P + I Y+ V D+ + T + T A I +L P RY+++V A+
Sbjct: 1421 -APPCLQTNGEITEYEYEVTAGDRRQT-VQKTTENIRGTR-AKIENLQPQTRYNVKVRAY 1477
Query: 187 SNGGDGRMSSPAITFQ 202
+ G G S+ + FQ
Sbjct: 1478 TARGAGPWSTE-VPFQ 1492
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 46/197 (23%), Positives = 82/197 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P PQ V + S+ ++TW E + N G++ + + W D + + +
Sbjct: 2622 PTGPPQNVRAGSVTSSRADITWTQPECEQRN--GKITDYEYELWSMDTWADNSTGHNPTE 2679
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 121
N ++ P T+Y ++V A N G+GP SE ++ T PS + + P
Sbjct: 2680 RLNLDQLI---PYTQYQIRVRAINKEGDGPFSE-WVPFTTSATNPPAPSDLQEEATFPHA 2735
Query: 122 VHVTWRYVSPSFEEEPIIGYKVRVW---EVDQDMSRANDTIIPVGNTLDAD-----IVDL 173
+ ++W + P+ I YKVR E + R + ++ D + DL
Sbjct: 2736 IEISW--LPPTPPHGNIDFYKVRYTPSGEANYREIRVETDRLECSDSNKKDRLCYRLSDL 2793
Query: 174 SPGKRYHMRVLAFSNGG 190
P + Y ++V A + GG
Sbjct: 2794 DPEQEYDIQVSAHTEGG 2810
>UNIPROTKB|Q8IVU1 [details] [associations]
symbol:IGDCC3 "Immunoglobulin superfamily DCC subclass
member 3" species:9606 "Homo sapiens" [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0050885
InterPro:IPR013098 Pfam:PF07679 EMBL:AC105129 EMBL:BC042054
EMBL:BC067107 EMBL:AF063936 IPI:IPI00292980 RefSeq:NP_004875.2
UniGene:Hs.128292 ProteinModelPortal:Q8IVU1 SMR:Q8IVU1
STRING:Q8IVU1 PhosphoSite:Q8IVU1 DMDM:296434537 PRIDE:Q8IVU1
Ensembl:ENST00000327987 GeneID:9543 KEGG:hsa:9543 UCSC:uc002aos.2
CTD:9543 GeneCards:GC15M065619 HGNC:HGNC:9700 HPA:HPA015246
MIM:604184 neXtProt:NX_Q8IVU1 PharmGKB:PA164720881 eggNOG:NOG260922
HOGENOM:HOG000113008 InParanoid:Q8IVU1 OMA:FAVEPSD
OrthoDB:EOG4R7V95 PhylomeDB:Q8IVU1 GenomeRNAi:9543 NextBio:35791
ArrayExpress:Q8IVU1 Bgee:Q8IVU1 Genevestigator:Q8IVU1
GermOnline:ENSG00000174498 Uniprot:Q8IVU1
Length = 814
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/204 (23%), Positives = 91/204 (44%)
Query: 6 PQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRTTR 63
P+ V + +ST + V+W+ P+ +E +IG+ + K +P E +S++T
Sbjct: 427 PRNVRAVSVSSTEVRVSWSEPLANTKE-----IIGYVLHIRKAADPPELEYQEAVSKSTF 481
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
L+ L+P T Y + AY G S L T +AP PP +V + G +++
Sbjct: 482 QH-LVSDLEPSTAYSFYIKAYTPRGASSASVPTLASTLGEAPAPPPLSVRVLG--SSSLQ 538
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
+ W + E G+K+ + S ++P G ++ L P Y +++
Sbjct: 539 LLWEPWPRLAQHEG--GFKL-FYRPASKTSFTGPILLP-GTVSSYNLSQLDPTAVYEVKL 594
Query: 184 LAFSNGGDGRMSSPAITFQMGEEK 207
LA++ GDG + ++ + E+
Sbjct: 595 LAYNQHGDGNATVRFVSLRGASER 618
>UNIPROTKB|E1B755 [details] [associations]
symbol:PTPRQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045598 "regulation of fat cell differentiation"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA]
InterPro:IPR000242 InterPro:IPR000387 InterPro:IPR003961
InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102 PRINTS:PR00700
PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056 PROSITE:PS50853
SMART:SM00060 SMART:SM00194 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0042472 GO:GO:0004725 GO:GO:0035335
GO:GO:0045598 GeneTree:ENSGT00700000104166 OMA:DVELEWE
EMBL:DAAA02012458 EMBL:DAAA02012459 EMBL:DAAA02012460
EMBL:DAAA02012461 EMBL:DAAA02012462 EMBL:DAAA02012463
EMBL:DAAA02012464 EMBL:DAAA02012465 IPI:IPI00838163
Ensembl:ENSBTAT00000048152 Uniprot:E1B755
Length = 2298
Score = 136 (52.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 56/206 (27%), Positives = 86/206 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ + R +S I +++ P + G + + I K + EE +
Sbjct: 758 VPDSAPENITYRNISSGEIELSFFP----PSSPNGIIQKYTIYLMKSNGNEERTI----N 809
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT I GL+ T+Y ++V A GEG S T AP PP +K ++
Sbjct: 810 TTSLVQNIKGLKKYTQYTIEVSASTLKGEGIRSAPINVLTEEDAPDSPPQDFSVKQLSGV 869
Query: 121 TVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
V ++W+ P E II Y V VW+ R++ + V T + DL Y
Sbjct: 870 MVKLSWQ---PPLEPNGIILYYTVYVWD------RSSLKTVNVTET-SLEFSDLDHNVEY 919
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGE 205
+ V A + GDG S I F+ E
Sbjct: 920 NAYVTASTRFGDGEKRSNIINFRTPE 945
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/194 (25%), Positives = 80/194 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIR--EN--IRGRLIGHRIKYW-KEDNPEETA 54
+P V P + ST+ +TW P + +N I +L + + W ED E
Sbjct: 1428 VPSV-PMNIAFSNVQSTSATLTWMRPDSIFGYFQNYKITTQLRAKKCREWDSEDCVEHQK 1486
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
+ YL + GL+ Y +V A NAG G S +T P PP VH+
Sbjct: 1487 IQYLYEADLTEETVYGLKKFRWYRFQVAASTNAGYGNASNWISTQTLPGPPDGPPENVHV 1546
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDL 173
+P +++++W P+ P Y + V VD D N ++I ++ DL
Sbjct: 1547 VATSPFSINISWS--EPTVITGPTF-YLIDVKSVDSD--EFNISLIKSNEENKTIEVKDL 1601
Query: 174 SPGKRYHMRVLAFS 187
RY + + AF+
Sbjct: 1602 EIFTRYSVVITAFT 1615
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 46/141 (32%), Positives = 67/141 (47%)
Query: 9 VFSRG--FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW- 65
VF G S I ++WN N GR+I + +KY KE P A Y RT +
Sbjct: 61 VFLAGERVGSAGILLSWNT----PPNPNGRIISYIVKY-KEVCPWMQATYTQVRTKPDSL 115
Query: 66 -ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L+ L P T Y +KV A N+AG G S+ +L +T AP K + ++ N + V++
Sbjct: 116 EVLLTNLNPGTTYEIKVAAENSAGIGVFSDPFLFQTAESAPGKVVNLT-VEAFNYSAVNL 174
Query: 125 TWRYVSPSFEEEPIIGYKVRV 145
W Y+ P I +K+ V
Sbjct: 175 IW-YL-PRQPNGKITSFKISV 193
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 52/208 (25%), Positives = 90/208 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P+ +P + +ST++ ++W+P ++ N G +I + + P E Y
Sbjct: 1148 VPETSPIINTFKNLSSTSVLLSWDPP--VKPN--GAIISYDLTL---QGPSEN---YSFV 1197
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T+ N+ ++ L P T Y A G GP S + T P PP + + +N T
Sbjct: 1198 TSDNYVILEELSPFTLYSFFAAARTIKGLGPSSVLFFY-TDESVPLAPPQNLTL--VNYT 1254
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---GNTLDADIVDLSPGK 177
+ + W SPS P+ G V+++ + + DTI G +A +V L P
Sbjct: 1255 S-DLVWLKWSPS----PVPGGIVKIYSL-KIHEHETDTIFYKNISGFQTEAKLVGLEPVS 1308
Query: 178 RYHMRVLAFSNGGDGRMSSPAITFQMGE 205
Y + + AF+ G+G S + F E
Sbjct: 1309 TYSISITAFTKVGNGNQFSNVVKFTTQE 1336
>MGI|MGI:1096349 [details] [associations]
symbol:Ptprq "protein tyrosine phosphatase, receptor type,
Q" species:10090 "Mus musculus" [GO:0004721 "phosphoprotein
phosphatase activity" evidence=IEA] [GO:0004725 "protein tyrosine
phosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006470 "protein
dephosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016311 "dephosphorylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016791 "phosphatase
activity" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045598 "regulation of fat cell differentiation"
evidence=ISO] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194 MGI:MGI:1096349
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0042472 GO:GO:0004725 GO:GO:0035335 GO:GO:0045598
eggNOG:COG5599 EMBL:AC123948 GeneTree:ENSGT00700000104166
HOGENOM:HOG000115793 HOVERGEN:HBG108308 EMBL:AC021642 EMBL:AC155168
IPI:IPI00674433 RefSeq:NP_001074901.1 UniGene:Mm.391418
ProteinModelPortal:P0C5E4 SMR:P0C5E4 STRING:P0C5E4
PhosphoSite:P0C5E4 PRIDE:P0C5E4 Ensembl:ENSMUST00000050702
GeneID:237523 KEGG:mmu:237523 UCSC:uc007gzb.1 CTD:374462
InParanoid:P0C5E4 OMA:DVELEWE OrthoDB:EOG4P2Q3H NextBio:383394
Bgee:P0C5E4 CleanEx:MM_PTPRQ Genevestigator:P0C5E4 Uniprot:P0C5E4
Length = 2300
Score = 136 (52.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 56/206 (27%), Positives = 84/206 (40%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P AP+ + + +S I + + P + G + + I Y K N E
Sbjct: 758 VPDSAPENITYKNISSEEIEIFFLP----PRSPNGIIQKYTI-YLKRSNSHEARTI---E 809
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
TT I GL+ T Y ++V A GEG S T AP PP +K ++
Sbjct: 810 TTSLTLTIGGLKKYTHYVIEVSASTLKGEGVRSMPISILTEEDAPDSPPQNFSVKQLSGV 869
Query: 121 TVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
TV ++W+ P E II Y V VW+ + N T + + ++ DL Y
Sbjct: 870 TVMLSWQ---PPLEPNGIILYYTVYVWD-KVSLKTINATEVSL------ELSDLDYHADY 919
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGE 205
V A + GDG+ S I F+ E
Sbjct: 920 SAYVTASTRFGDGKTRSSVINFRTPE 945
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 53/199 (26%), Positives = 93/199 (46%)
Query: 12 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 71
+ +S++I + W+P E N G++ + I Y E +T + T N LI GL
Sbjct: 578 KNISSSSILLYWDPPEY--PN--GKITHYTI-YAME---LDTNRAFQMTTVDNSFLITGL 629
Query: 72 QPDTKYYVKVMAYNNAGEGPESER--YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 129
+ T+Y ++V A + GE SE RT P+ P V + ++P+ + +TW
Sbjct: 630 KKYTRYKMRVAASTHVGESSLSEENDLFVRTPEDEPESSPQDVKVTDVSPSELSLTW--- 686
Query: 130 SPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 186
SP E+P II Y+V + + D +T +T + + DL P Y++ + ++
Sbjct: 687 SPP--EKPNGIIIAYEV--FYQNADALFVKNT-----STTNITLSDLKPYTLYNISIQSY 737
Query: 187 SNGGDGRMSSPAITFQMGE 205
+ G G SS ++ + E
Sbjct: 738 TRLGHGNQSSSLLSVRTSE 756
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 44/141 (31%), Positives = 66/141 (46%)
Query: 9 VFSRG--FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW- 65
VF G S I ++WN N GR+I + +KY KE P Y R +
Sbjct: 61 VFLAGERVGSAGILLSWNT----PPNPNGRIISYVVKY-KEVCPWMQTAYTRVRAKPDSL 115
Query: 66 -ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L+ L P T Y +KV A N+AG G S+ +L +T AP K + ++ +N + V++
Sbjct: 116 EVLLTNLNPGTTYEIKVAAENSAGIGVFSDPFLFQTAESAPGKVVNLT-VEALNYSAVNL 174
Query: 125 TWRYVSPSFEEEPIIGYKVRV 145
W Y+ P I +K+ V
Sbjct: 175 IW-YL-PRQPNGKITSFKISV 193
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 54/211 (25%), Positives = 87/211 (41%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTW-NPIELIR--EN--IRGRLIGHRIKYWK-EDNPEETA 54
+P V FS ST++ + W P ++ +N I +L + + W+ E+ E
Sbjct: 1430 VPSVPTNTAFSN-VQSTSVTLRWIKPDTILGYFQNYKITTQLRAQKCREWEPEECVEHQE 1488
Query: 55 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 114
V YL + + GL+ Y +V A NAG G S +T P PP V +
Sbjct: 1489 VQYLYEANQTEDTVRGLKKFQWYRFQVAASTNAGYGNASSWISTQTLPGPPDGPPENVRV 1548
Query: 115 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDL 173
+P ++++W P+ P Y + V VD D N + + +I DL
Sbjct: 1549 VATSPFGINISWN--EPAIITGPTF-YLIDVKSVDND--NFNISFVKSNEENKTTEINDL 1603
Query: 174 SPGKRYHMRVLAFS---NGG--DGRMSSPAI 199
RY + + AF +G DG+ S+ I
Sbjct: 1604 EVFTRYSVVITAFVGNVSGAYTDGKSSAEVI 1634
>UNIPROTKB|I3LRR9 [details] [associations]
symbol:NFASC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071205 "protein localization to juxtaparanode region
of axon" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IEA] [GO:0033270 "paranode region of axon" evidence=IEA]
[GO:0033010 "paranodal junction" evidence=IEA] [GO:0030913
"paranodal junction assembly" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0002175 "protein localization to paranode region of axon"
evidence=IEA] [GO:0007422 "peripheral nervous system development"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR026965 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005886 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 InterPro:IPR013098 Pfam:PF07679
GO:GO:0033270 GO:GO:0030913 GO:GO:0002175 InterPro:IPR026966
Pfam:PF13882 GeneTree:ENSGT00690000101868 GO:GO:0071205
GO:GO:0033010 PANTHER:PTHR10489:SF41 OMA:QQASFPG EMBL:FP326696
Ensembl:ENSSSCT00000031275 Uniprot:I3LRR9
Length = 1120
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 50/208 (24%), Positives = 88/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 593 PRAAPTDVKIRVLNSTAISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 650
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
+ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 651 QAGFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 709
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N T+++ W + P +IGY ++ V + ++ I+ N +
Sbjct: 710 QPNLETINLEWDH--PEHPNGILIGYTLKY--VAFNGTKVGKQIVENFSPNQTKFTVQRA 765
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPA 198
P RY + A + G G SPA
Sbjct: 766 DPVSRYRFSLSARTQVGSGEAVTEESPA 793
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 495 PESNPSDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRRRETRET---WNNVT 548
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T
Sbjct: 549 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNST 608
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V + + Y+ W + + P G+ L + L
Sbjct: 609 AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFP-GDRLRGVVSRLF 667
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 668 PYSNYKLEMVVVNGRGDGPRS 688
>UNIPROTKB|Q03696 [details] [associations]
symbol:Q03696 "Neuronal-glial cell adhesion molecule"
species:9031 "Gallus gallus" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=TAS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
Reactome:REACT_115433 InterPro:IPR013098 Pfam:PF07679
HOVERGEN:HBG000144 InterPro:IPR026966 Pfam:PF13882 CTD:3897
KO:K06550 EMBL:X56969 IPI:IPI00602824 PIR:A37967 RefSeq:NP_990484.1
UniGene:Gga.629 ProteinModelPortal:Q03696 IntAct:Q03696
PRIDE:Q03696 GeneID:396059 KEGG:gga:396059 NextBio:20816119
Uniprot:Q03696
Length = 1266
Score = 107 (42.7 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 36/151 (23%), Positives = 63/151 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENI---RGRLIGHRIKYWKEDNPEETAVYYL 58
P+ P GV G + + +TW P+ N R R+ ++ P +
Sbjct: 700 PERNPGGVHGEGNETGNLVITWEPLPPQAWNAPWARYRVQWRPLEEPGGGGPSGGFPWAE 759
Query: 59 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 118
S ++ GL P + + ++V A N AG+GPE+ + + P P V ++ +N
Sbjct: 760 STVDAPPVVVGGLPPFSPFQIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLN 819
Query: 119 PTTVHVTWRYVS-PSFEEEPIIGYKVRVWEV 148
+TV V W P + G++V W +
Sbjct: 820 SSTVRVRWTLGGGPKELRGRLRGFRVLYWRL 850
Score = 106 (42.4 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/116 (25%), Positives = 57/116 (49%)
Query: 66 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 125
AL+ GL+P ++Y ++V+ +N G+GP SE T P PP + ++ ++ T + V
Sbjct: 893 ALLGGLRPWSRYQLRVLVFNGRGDGPPSEPIAFETPEGVPG-PPEELRVERLDDTALSVV 951
Query: 126 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 181
R +F+ I GY +R +V+ + +++ D+ L+ RY +
Sbjct: 952 ERR---TFKRS-ITGYVLRYQQVEPGSALPGGSVL---RDPQCDLRGLNARSRYRL 1000
Score = 73 (30.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK 46
+P V P+ V NS+ + V W +E +RGRL G R+ YW+
Sbjct: 805 LPLVYPENVGVELLNSSTVRVRWTLGGGPKE-LRGRLRGFRVLYWR 849
Score = 72 (30.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 163 GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 205
G+ A + L P RY +RVL F+ GDG S P I F+ E
Sbjct: 888 GDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEP-IAFETPE 929
>WB|WBGene00004732 [details] [associations]
symbol:sax-7 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009790
"embryo development" evidence=IMP] [GO:0005913 "cell-cell adherens
junction" evidence=IDA] [GO:0016328 "lateral plasma membrane"
evidence=IDA] [GO:0050839 "cell adhesion molecule binding"
evidence=ISS] [GO:0030506 "ankyrin binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0003384 "apical constriction involved in gastrulation"
evidence=IGI] [GO:0042074 "cell migration involved in gastrulation"
evidence=IGI] [GO:0000132 "establishment of mitotic spindle
orientation" evidence=IGI] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0000132 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030017
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0005913 GO:GO:0050839 GO:GO:0016328
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042074 InterPro:IPR026966
Pfam:PF13882 GeneTree:ENSGT00690000101868 GO:GO:0003384
EMBL:FO080614 UniGene:Cel.17136 GeneID:177602 KEGG:cel:CELE_C18F3.2
UCSC:C18F3.2b CTD:177602 HOGENOM:HOG000122641 NextBio:897540
EMBL:AB206669 RefSeq:NP_001033396.1 ProteinModelPortal:Q53U87
SMR:Q53U87 STRING:Q53U87 PRIDE:Q53U87 EnsemblMetazoa:C18F3.2c
WormBase:C18F3.2c InParanoid:Q53U87 OMA:MECIAEG ArrayExpress:Q53U87
Uniprot:Q53U87
Length = 1331
Score = 133 (51.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 47/167 (28%), Positives = 69/167 (41%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE------ETAV 55
P P V ++G + I V W P+ RE G + +KY +D + E AV
Sbjct: 752 PDKNPDEVAAKGTSPENIIVQWKPMS--REEWNGADFHYVVKYRPKDEDQRVGDWKEVAV 809
Query: 56 Y--YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE-RTYRKAPQKPPSAV 112
+ R T N ++P Y V+V A N+ G +E RT P PS +
Sbjct: 810 EDPFADRVTVNLDDEKDVKPFQPYEVQVQAVNSEGRTNVVPETVEGRTGEGVPSSIPSGL 869
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW--EVDQDMSRAND 157
+ + TTV + W V P GYK+ W E DQD +++
Sbjct: 870 RVLEKSGTTVTLAWNGVDPQTANGNFTGYKITYWVDEADQDSDDSSE 916
Score = 97 (39.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 43/165 (26%), Positives = 65/165 (39%)
Query: 35 GRLIGHRIKYWKEDNP---EETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 90
G+L + ++Y K N E++ I GL+ +T Y + A+ +AGEG
Sbjct: 1026 GKLARYEVEYCKTQNGKLVEKSCPRKQIDADSKEIRITGLENETPYRFILRAHTSAGEGD 1085
Query: 91 PESERYL---ERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 147
P S E T PS V I +V++R E +G V
Sbjct: 1086 PNSSDATTLPETTAAGVDPGVPSLVE-NAIGDKYFNVSFRPAKYDDESRAPVGNTYEVQY 1144
Query: 148 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 192
QD +T+ P + L + LSPG +Y +RV A +G
Sbjct: 1145 KPQDADEW-ETVKPADDGLTVHVDGLSPGTKYDVRVAALQVDPEG 1188
Score = 65 (27.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET 53
+P P G+ + T + + WN ++ + G G++I YW ++ +++
Sbjct: 861 VPSSIPSGLRVLEKSGTTVTLAWNGVD--PQTANGNFTGYKITYWVDEADQDS 911
>UNIPROTKB|G3MYY6 [details] [associations]
symbol:Bt.110252 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071205 "protein localization to juxtaparanode
region of axon" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IEA] [GO:0033270 "paranode region of axon" evidence=IEA]
[GO:0033010 "paranodal junction" evidence=IEA] [GO:0030913
"paranodal junction assembly" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0002175 "protein localization to paranode region of axon"
evidence=IEA] [GO:0007422 "peripheral nervous system development"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR026965 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005886 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007422 GO:GO:0050808
InterPro:IPR013098 Pfam:PF07679 GO:GO:0033270 GO:GO:0030913
GO:GO:0002175 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 GO:GO:0071205 GO:GO:0033010
PANTHER:PTHR10489:SF41 OMA:QQASFPG EMBL:DAAA02041931
Ensembl:ENSBTAT00000063387 Uniprot:G3MYY6
Length = 1345
Score = 133 (51.9 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 50/208 (24%), Positives = 88/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 824 PRAAPTDVKIRVLNSTAISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 881
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
+ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 882 QAGFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 940
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N T+++ W + P +IGY ++ V + ++ I+ N +
Sbjct: 941 QPNLETINLEWDH--PEHPNGILIGYTLKY--VAFNGTKVGKQIVENFSPNQTKFTVQRA 996
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPA 198
P RY + A + G G SPA
Sbjct: 997 DPVSRYRFSLSARTQVGSGEAVTEESPA 1024
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 726 PESNPSDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRRRETRET---WNNVT 779
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T
Sbjct: 780 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNST 839
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V + + Y+ W + + P G+ L + L
Sbjct: 840 AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFP-GDRLRGVVSRLF 898
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 899 PYSNYKLEMVVVNGRGDGPRS 919
>UNIPROTKB|F8W8X7 [details] [associations]
symbol:NFASC "Neurofascin" species:9606 "Homo sapiens"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882 PANTHER:PTHR10489:SF41
EMBL:AC096675 EMBL:AL391822 HGNC:HGNC:29866 ChiTaRS:NFASC
IPI:IPI01026061 ProteinModelPortal:F8W8X7 SMR:F8W8X7 PRIDE:F8W8X7
Ensembl:ENST00000338586 ArrayExpress:F8W8X7 Bgee:F8W8X7
Uniprot:F8W8X7
Length = 1224
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/208 (24%), Positives = 89/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 825 PRAAPTEVKVRVMNSTAISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 882
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 883 QASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 941
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N T+++ W + P +IGY ++ V + ++ I+ N +
Sbjct: 942 QPNLETINLEWDH--PEHPNGIMIGYTLKY--VAFNGTKVGKQIVENFSPNQTKFTVQRT 997
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPA 198
P RY + A + G G SPA
Sbjct: 998 DPVSRYRFTLSARTQVGSGEAVTEESPA 1025
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 727 PESNPGDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRR---RETREAWNNVT 780
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T
Sbjct: 781 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNST 840
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V + + Y+ W + + P G+ L + L
Sbjct: 841 AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFP-GDRLRGVVSRLF 899
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 900 PYSNYKLEMVVVNGRGDGPRS 920
>UNIPROTKB|F1SJL0 [details] [associations]
symbol:IGDCC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0050885 InterPro:IPR013098
Pfam:PF07679 OMA:FAVEPSD GeneTree:ENSGT00680000099868 EMBL:FP312838
Ensembl:ENSSSCT00000005442 Uniprot:F1SJL0
Length = 802
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/204 (23%), Positives = 89/204 (43%)
Query: 6 PQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYY-LSRTTR 63
P V + +ST + V+W P+ +E +IG+ + K +P E +S++T
Sbjct: 426 PLNVQAVSVSSTEVRVSWTEPVVNTKE-----IIGYVLHIRKAADPPELEYQEAVSKSTF 480
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
L+ L+P T Y + AY G S L T +AP PP +V + G +T+
Sbjct: 481 QH-LVSDLEPSTAYSFYIKAYTPRGASSASAPTLASTLGEAPAPPPLSVRVLG--SSTLQ 537
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
+ W + E G+K+ + S ++P G ++ L P Y +++
Sbjct: 538 LLWEPWPRLAQHEG--GFKL-FYRPASKTSFTGPILLP-GTVSSYNLSQLDPTAVYEVKL 593
Query: 184 LAFSNGGDGRMSSPAITFQMGEEK 207
LA++ G+G + ++ + E+
Sbjct: 594 LAYNQHGEGNATVRFVSLRGASER 617
>UNIPROTKB|F8W9B6 [details] [associations]
symbol:NFASC "Neurofascin" species:9606 "Homo sapiens"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882 PANTHER:PTHR10489:SF41
EMBL:AC096675 EMBL:AL391822 IPI:IPI00384998 HGNC:HGNC:29866
ChiTaRS:NFASC ProteinModelPortal:F8W9B6 SMR:F8W9B6 PRIDE:F8W9B6
Ensembl:ENST00000338515 ArrayExpress:F8W9B6 Bgee:F8W9B6
Uniprot:F8W9B6
Length = 1257
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/208 (24%), Positives = 89/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 825 PRAAPTEVKVRVMNSTAISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 882
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 883 QASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 941
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N T+++ W + P +IGY ++ V + ++ I+ N +
Sbjct: 942 QPNLETINLEWDH--PEHPNGIMIGYTLKY--VAFNGTKVGKQIVENFSPNQTKFTVQRT 997
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPA 198
P RY + A + G G SPA
Sbjct: 998 DPVSRYRFTLSARTQVGSGEAVTEESPA 1025
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 727 PESNPGDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRR---RETREAWNNVT 780
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T
Sbjct: 781 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNST 840
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V + + Y+ W + + P G+ L + L
Sbjct: 841 AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFP-GDRLRGVVSRLF 899
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 900 PYSNYKLEMVVVNGRGDGPRS 920
>UNIPROTKB|F8W792 [details] [associations]
symbol:NFASC "Neurofascin" species:9606 "Homo sapiens"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882 PANTHER:PTHR10489:SF41
EMBL:AC096675 EMBL:AL391822 IPI:IPI00513695 HGNC:HGNC:29866
ChiTaRS:NFASC ProteinModelPortal:F8W792 SMR:F8W792 PRIDE:F8W792
Ensembl:ENST00000367170 ArrayExpress:F8W792 Bgee:F8W792
Uniprot:F8W792
Length = 1268
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/208 (24%), Positives = 89/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 825 PRAAPTEVKVRVMNSTAISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 882
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 883 QASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 941
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N T+++ W + P +IGY ++ V + ++ I+ N +
Sbjct: 942 QPNLETINLEWDH--PEHPNGIMIGYTLKY--VAFNGTKVGKQIVENFSPNQTKFTVQRT 997
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPA 198
P RY + A + G G SPA
Sbjct: 998 DPVSRYRFTLSARTQVGSGEAVTEESPA 1025
Score = 128 (50.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 727 PESNPGDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRR---RETREAWNNVT 780
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T
Sbjct: 781 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNST 840
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V + + Y+ W + + P G+ L + L
Sbjct: 841 AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFP-GDRLRGVVSRLF 899
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 900 PYSNYKLEMVVVNGRGDGPRS 920
>UNIPROTKB|F8W791 [details] [associations]
symbol:NFASC "Neurofascin" species:9606 "Homo sapiens"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882 PANTHER:PTHR10489:SF41
EMBL:AC096675 EMBL:AL391822 HGNC:HGNC:29866 ChiTaRS:NFASC
IPI:IPI01026036 ProteinModelPortal:F8W791 SMR:F8W791
Ensembl:ENST00000367171 UCSC:uc001hbk.1 ArrayExpress:F8W791
Bgee:F8W791 Uniprot:F8W791
Length = 1332
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/208 (24%), Positives = 89/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 810 PRAAPTEVKVRVMNSTAISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 867
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 868 QASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 926
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N T+++ W + P +IGY ++ V + ++ I+ N +
Sbjct: 927 QPNLETINLEWDH--PEHPNGIMIGYTLKY--VAFNGTKVGKQIVENFSPNQTKFTVQRT 982
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPA 198
P RY + A + G G SPA
Sbjct: 983 DPVSRYRFTLSARTQVGSGEAVTEESPA 1010
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 712 PESNPGDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRR---RETREAWNNVT 765
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T
Sbjct: 766 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNST 825
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V + + Y+ W + + P G+ L + L
Sbjct: 826 AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFP-GDRLRGVVSRLF 884
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 885 PYSNYKLEMVVVNGRGDGPRS 905
>UNIPROTKB|E2RM16 [details] [associations]
symbol:NFASC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071205 "protein localization to
juxtaparanode region of axon" evidence=IEA] [GO:0050808 "synapse
organization" evidence=IEA] [GO:0033270 "paranode region of axon"
evidence=IEA] [GO:0033010 "paranodal junction" evidence=IEA]
[GO:0030913 "paranodal junction assembly" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0002175 "protein localization to paranode region
of axon" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR026965 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0005886 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007422 GO:GO:0050808
InterPro:IPR013098 Pfam:PF07679 GO:GO:0033270 GO:GO:0030913
GO:GO:0002175 InterPro:IPR026966 Pfam:PF13882
GeneTree:ENSGT00690000101868 GO:GO:0071205 GO:GO:0033010
PANTHER:PTHR10489:SF41 OMA:QQASFPG EMBL:AAEX03018246
EMBL:AAEX03018247 ProteinModelPortal:E2RM16
Ensembl:ENSCAFT00000015800 Uniprot:E2RM16
Length = 1343
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/149 (25%), Positives = 70/149 (46%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 825 PRAAPTDVKIRVLNSTAISLQWNRV--YPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 882
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 883 QASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 941
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVR 144
N T+++ W + P +IGY ++
Sbjct: 942 QPNLETINLEWDH--PEHPNGILIGYTLK 968
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 727 PESNPADVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRRRETRET---WNNAT 780
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T
Sbjct: 781 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNST 840
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V P + + Y+ W + + P G+ + L
Sbjct: 841 AISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFP-GDRPRGVVSRLF 899
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 900 PYSNYKLEMVVVNGRGDGPRS 920
>UNIPROTKB|J3QSX2 [details] [associations]
symbol:NFASC "Neurofascin" species:9606 "Homo sapiens"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR026966 Pfam:PF13882 PANTHER:PTHR10489:SF41
EMBL:AC096675 EMBL:AL391822 HGNC:HGNC:29866 ChiTaRS:NFASC
ProteinModelPortal:J3QSX2 Ensembl:ENST00000367172 OMA:QQASFPG
Uniprot:J3QSX2
Length = 1347
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/208 (24%), Positives = 89/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 825 PRAAPTEVKVRVMNSTAISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 882
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 883 QASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 941
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N T+++ W + P +IGY ++ V + ++ I+ N +
Sbjct: 942 QPNLETINLEWDH--PEHPNGIMIGYTLKY--VAFNGTKVGKQIVENFSPNQTKFTVQRT 997
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPA 198
P RY + A + G G SPA
Sbjct: 998 DPVSRYRFTLSARTQVGSGEAVTEESPA 1025
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 727 PESNPGDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRR---RETREAWNNVT 780
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T
Sbjct: 781 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNST 840
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V + + Y+ W + + P G+ L + L
Sbjct: 841 AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFP-GDRLRGVVSRLF 899
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 900 PYSNYKLEMVVVNGRGDGPRS 920
>UNIPROTKB|O94856 [details] [associations]
symbol:NFASC "Neurofascin" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002175 "protein localization to
paranode region of axon" evidence=IEA] [GO:0030913 "paranodal
junction assembly" evidence=IEA] [GO:0033010 "paranodal junction"
evidence=IEA] [GO:0033270 "paranode region of axon" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0071205
"protein localization to juxtaparanode region of axon"
evidence=IEA] [GO:0072661 "protein targeting to plasma membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0005622
"intracellular" evidence=ISS] [GO:0043194 "axon initial segment"
evidence=ISS] [GO:0033268 "node of Ranvier" evidence=ISS;TAS]
[GO:0042552 "myelination" evidence=ISS] [GO:0007422 "peripheral
nervous system development" evidence=ISS] InterPro:IPR003961
InterPro:IPR007110 InterPro:IPR026965 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007155 GO:GO:0007422
GO:GO:0050808 GO:GO:0005622 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 GO:GO:0043194 GO:GO:0033268 GO:GO:0033270
GO:GO:0030913 GO:GO:0002175 HOVERGEN:HBG000144 InterPro:IPR026966
Pfam:PF13882 eggNOG:NOG293951 GO:GO:0071205 GO:GO:0033010 CTD:23114
KO:K06757 PANTHER:PTHR10489:SF41 EMBL:AB018299 EMBL:AK027553
EMBL:AK090639 EMBL:AK127424 EMBL:AK128699 EMBL:AC096675
EMBL:AL391822 EMBL:BC008124 EMBL:BC117674 EMBL:BC137013
EMBL:BC144454 EMBL:AB177861 EMBL:BX537841 EMBL:CR749402
IPI:IPI00384998 IPI:IPI00394653 IPI:IPI00394655 IPI:IPI00443574
IPI:IPI00470575 IPI:IPI00477765 IPI:IPI00477942 IPI:IPI00513695
IPI:IPI00513705 IPI:IPI00655702 IPI:IPI00655858 IPI:IPI00655890
IPI:IPI00656129 RefSeq:NP_001005388.2 RefSeq:NP_001005389.2
RefSeq:NP_001153803.1 RefSeq:NP_001153804.1 RefSeq:NP_001153805.1
RefSeq:NP_055905.2 UniGene:Hs.13349 PDB:3P3Y PDB:3P40 PDBsum:3P3Y
PDBsum:3P40 ProteinModelPortal:O94856 SMR:O94856 IntAct:O94856
MINT:MINT-2798373 STRING:O94856 PhosphoSite:O94856 PaxDb:O94856
PRIDE:O94856 Ensembl:ENST00000339876 Ensembl:ENST00000360049
Ensembl:ENST00000401399 Ensembl:ENST00000403080
Ensembl:ENST00000404076 Ensembl:ENST00000404907
Ensembl:ENST00000430393 Ensembl:ENST00000446412
Ensembl:ENST00000447819 Ensembl:ENST00000513543
Ensembl:ENST00000539706 GeneID:23114 KEGG:hsa:23114 UCSC:uc001hbh.3
UCSC:uc001hbi.3 UCSC:uc001hbj.3 UCSC:uc010pra.2 UCSC:uc010prb.2
UCSC:uc010prc.2 GeneCards:GC01P204797 HGNC:HGNC:29866 HPA:HPA008832
MIM:609145 neXtProt:NX_O94856 PharmGKB:PA128395771 ChiTaRS:NFASC
EvolutionaryTrace:O94856 GenomeRNAi:23114 NextBio:44320
ArrayExpress:O94856 Bgee:O94856 Genevestigator:O94856
GermOnline:ENSG00000163531 Uniprot:O94856
Length = 1347
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/208 (24%), Positives = 89/208 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ AP V R NSTAI++ WN + + ++G+L +R YW+E + + R
Sbjct: 825 PRAAPTEVKVRVMNSTAISLQWNRV--YSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQ 882
Query: 62 TRNW------ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 115
++ ++ L P + Y ++++ N G+GP SE E T + P ++
Sbjct: 883 QASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETK-EFTTPEGVPSAPRRFRVR 941
Query: 116 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDL 173
N T+++ W + P +IGY ++ V + ++ I+ N +
Sbjct: 942 QPNLETINLEWDH--PEHPNGIMIGYTLKY--VAFNGTKVGKQIVENFSPNQTKFTVQRT 997
Query: 174 SPGKRYHMRVLAFSNGGDGRM---SSPA 198
P RY + A + G G SPA
Sbjct: 998 DPVSRYRFTLSARTQVGSGEAVTEESPA 1025
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/201 (21%), Positives = 80/201 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P+ P V G + +TW P+ + G + + +K W+ ET + + T
Sbjct: 727 PESNPGDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYIVK-WRR---RETREAWNNVT 780
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+VG P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T
Sbjct: 781 VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNST 840
Query: 121 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 174
+ + W V + + Y+ W + + P G+ L + L
Sbjct: 841 AISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFP-GDRLRGVVSRLF 899
Query: 175 PGKRYHMRVLAFSNGGDGRMS 195
P Y + ++ + GDG S
Sbjct: 900 PYSNYKLEMVVVNGRGDGPRS 920
>UNIPROTKB|E1B864 [details] [associations]
symbol:E1B864 "Integrin beta" species:9913 "Bos taurus"
[GO:0048870 "cell motility" evidence=IEA] [GO:0046847 "filopodium
assembly" evidence=IEA] [GO:0031581 "hemidesmosome assembly"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0030056 "hemidesmosome" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0009925 "basal plasma membrane"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0008305 "integrin complex" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003644 InterPro:IPR003961
InterPro:IPR012013 InterPro:IPR016201 Pfam:PF00041 Pfam:PF03160
PROSITE:PS50853 SMART:SM00060 SMART:SM00237 SMART:SM00327
InterPro:IPR015812 InterPro:IPR012896 GO:GO:0007275 GO:GO:0031252
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009611
SUPFAM:SSF49265 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007229 GO:GO:0007160 GO:GO:0048870 GO:GO:0005604
GO:GO:0046847 GO:GO:0009925 GO:GO:0030056 InterPro:IPR003659
SMART:SM00423 GO:GO:0031581 GO:GO:0008305 InterPro:IPR002369
PANTHER:PTHR10082 Pfam:PF07965 Pfam:PF00362 PRINTS:PR01186
SMART:SM00187 SUPFAM:SSF69687 SUPFAM:SSF103575 PROSITE:PS00243
GeneTree:ENSGT00700000104058 OMA:EDDDCTY PANTHER:PTHR10082:SF6
EMBL:DAAA02049514 EMBL:DAAA02049515 EMBL:DAAA02049516
EMBL:DAAA02049517 IPI:IPI01017578 Ensembl:ENSBTAT00000042566
Uniprot:E1B864
Length = 1808
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/174 (29%), Positives = 76/174 (43%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ G+R+KYW + + E A + L +
Sbjct: 1120 APQNPNAKAAGSRKIHFNWLPPP-------GKPTGYRVKYWIQGDSESEA-HLLDSKVPS 1171
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT+++ P +P + ++ T +
Sbjct: 1172 VEL-TNLYPYCDYEMKVCAYGAQGEGPYSSPVSCRTHQEVPSEP-GRLAFNVVSSTVTQL 1229
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
+W P+ I Y+V V++D N I P+ L VD SP KR
Sbjct: 1230 SW--AEPAETNGEITAYEVCYGLVNED----NRPIGPMKKVL----VD-SPKKR 1272
>UNIPROTKB|E1BB93 [details] [associations]
symbol:BOC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 GO:GO:0043025 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030426 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007224
CTD:91653 OMA:QPDHGRL GO:GO:0045663 GeneTree:ENSGT00680000099752
EMBL:DAAA02001392 IPI:IPI00716525 RefSeq:NP_001193148.1
UniGene:Bt.690 ProteinModelPortal:E1BB93 PRIDE:E1BB93
Ensembl:ENSBTAT00000018474 GeneID:512018 KEGG:bta:512018
NextBio:20870210 Uniprot:E1BB93
Length = 1115
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 59/225 (26%), Positives = 88/225 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP + T++ VTW P R N + R++Y K + + +
Sbjct: 605 PPEAPDRPTISMASETSVYVTWIP----RGNGGFPIQSFRVEYKKLKKVGDWILATSAIP 660
Query: 62 TRNWAL-IVGLQPDTKYYVKVMAYNNAGEGPES--ER------YLERTYRKAPQKPPSAV 112
++ I GL+ T Y +V A N GE S R Y R Y + P P
Sbjct: 661 PSRLSVEITGLEKGTSYKFRVRALNMLGESEPSAPSRPYVVSGYSSRVYER-PVAGPYIT 719
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKV--RVWEVDQDMSRANDTIIPVGNTLDADI 170
+N TT+ + W Y+ S PI G+ + R + D D D + G+ I
Sbjct: 720 FTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMV--EGDRYWHSI 777
Query: 171 VDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS-GSP 214
L P Y +++ F+ GG+ S+ I E K KS G P
Sbjct: 778 SHLQPETSYDIKMQCFNEGGESEFSNVMIC----ETKARKSSGQP 818
>MGI|MGI:2146149 [details] [associations]
symbol:Egflam "EGF-like, fibronectin type III and laminin G
domains" species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005539 "glycosaminoglycan binding" evidence=IDA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005614 "interstitial matrix"
evidence=IDA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IDA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR000742 InterPro:IPR003961 Pfam:PF00008 Pfam:PF00041
PROSITE:PS50026 PROSITE:PS50853 SMART:SM00060 SMART:SM00181
MGI:MGI:2146149 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
SUPFAM:SSF49265 GO:GO:0030198 GO:GO:0045202 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0010811
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS50025
GeneTree:ENSGT00530000063501 GO:GO:0005604 GO:GO:0005614
Pfam:PF02210 HSSP:P00740 CTD:133584 HOGENOM:HOG000112344
HOVERGEN:HBG107839 OrthoDB:EOG434W58 eggNOG:NOG238064 OMA:FMRFKTT
GO:GO:0005539 GO:GO:0019800 EMBL:DQ223720 EMBL:AK031136
EMBL:AK033332 EMBL:AK037223 EMBL:AK041546 EMBL:AC105969
EMBL:AC158747 EMBL:BC051455 EMBL:BC095994 EMBL:BC150710
IPI:IPI00221657 IPI:IPI00756051 RefSeq:NP_848863.1
UniGene:Mm.203208 ProteinModelPortal:Q4VBE4 SMR:Q4VBE4
IntAct:Q4VBE4 STRING:Q4VBE4 PhosphoSite:Q4VBE4 PaxDb:Q4VBE4
PRIDE:Q4VBE4 Ensembl:ENSMUST00000058593 Ensembl:ENSMUST00000096494
GeneID:268780 KEGG:mmu:268780 UCSC:uc007vea.1 UCSC:uc007veb.1
InParanoid:Q4VBE4 NextBio:392491 Bgee:Q4VBE4 Genevestigator:Q4VBE4
Uniprot:Q4VBE4
Length = 1017
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/123 (31%), Positives = 57/123 (46%)
Query: 97 LERTYRKAPQK-PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS-R 154
L RK+ + PP + + +N T + W+ +P IIGY V EV D S R
Sbjct: 25 LRTALRKSGKVGPPLDIKLGALNCTAFSIQWK--TPKRSGSSIIGYTVFYSEVGSDKSLR 82
Query: 155 ANDTIIPVG-NTLDADIV--DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 211
+PVG +TL + V DL PG Y + V A+S G GR+S P + ++
Sbjct: 83 ERSHNVPVGQDTLITEEVIGDLKPGTEYQVSVAAYSQTGKGRLSFPRHVTTLSQDSCLPP 142
Query: 212 GSP 214
+P
Sbjct: 143 AAP 145
>RGD|1307338 [details] [associations]
symbol:Igdcc3 "immunoglobulin superfamily, DCC subclass, member
3" species:10116 "Rattus norvegicus" [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:1307338 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0050885 InterPro:IPR013098 Pfam:PF07679 CTD:9543 OMA:FAVEPSD
OrthoDB:EOG4R7V95 GeneTree:ENSGT00680000099868 IPI:IPI00370083
RefSeq:XP_003750576.1 RefSeq:XP_003754467.1
ProteinModelPortal:D3ZQ86 Ensembl:ENSRNOT00000051353 GeneID:315759
KEGG:rno:315759 UCSC:RGD:1307338 ArrayExpress:D3ZQ86 Uniprot:D3ZQ86
Length = 812
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 6 PQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTR 63
P+ V + +ST + V+W+ P+ +E +IG+ + K D+P+ +S++T
Sbjct: 437 PRNVRAVSVSSTEVRVSWSEPLTHTKE-----IIGYVLHIRKAADSPKLEYQEAVSKSTF 491
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
L+ L+P T Y + AY G S L T +AP PP +V + G +++
Sbjct: 492 QH-LVRDLEPSTAYSFYIKAYTPRGASLASVPTLASTLGEAPVPPPLSVRLLG--SSSLQ 548
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
+ W+ P + G+K+ + S ++P G ++ L P Y +++
Sbjct: 549 LLWK-PWPRLAQHNG-GFKL-FYRPASAASFTGPILLP-GTVSSYNLSQLDPSTVYEVKL 604
Query: 184 LAFSNGGDGRMSSPAITFQMGEEK 207
LA++ GDG + ++ + E+
Sbjct: 605 LAYNQNGDGNATVRFVSLKGASER 628
>UNIPROTKB|E1C8V0 [details] [associations]
symbol:NFASC "Neurofascin" species:9031 "Gallus gallus"
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0042552 "myelination"
evidence=IEA] [GO:0050808 "synapse organization" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR026965
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007422 GO:GO:0050808 GO:GO:0042552 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00690000101868 PANTHER:PTHR10489:SF41
EMBL:AADN02044911 IPI:IPI00935111 ProteinModelPortal:E1C8V0
Ensembl:ENSGALT00000040538 ArrayExpress:E1C8V0 Uniprot:E1C8V0
Length = 867
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P++ P GV G + +TW P+ + G + + ++ W+ +P + +Y + T
Sbjct: 725 PEINPTGVQGAGTQKNNMEITWTPLNATQAY--GPNLRYIVR-WRRRDPRGS--WY-NET 778
Query: 62 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
+ +V P Y +KV A N+ G PE E Y+ + P+ P+ V I+ +N T
Sbjct: 779 VKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNST 838
Query: 121 TVHVTWRYV 129
+ +TW V
Sbjct: 839 AIALTWTRV 847
>UNIPROTKB|F1N279 [details] [associations]
symbol:ROBO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR003596 SMART:SM00406
GeneTree:ENSGT00660000095158 EMBL:DAAA02000591 EMBL:DAAA02000592
EMBL:DAAA02000593 EMBL:DAAA02000594 EMBL:DAAA02000595
EMBL:DAAA02000596 EMBL:DAAA02000597 EMBL:DAAA02000598
EMBL:DAAA02000599 EMBL:DAAA02000600 EMBL:DAAA02000601
EMBL:DAAA02000602 EMBL:DAAA02000603 EMBL:DAAA02000604
EMBL:DAAA02000605 IPI:IPI01001656 Ensembl:ENSBTAT00000048615
ArrayExpress:F1N279 Uniprot:F1N279
Length = 1483
Score = 130 (50.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 47/185 (25%), Positives = 78/185 (42%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 74
+S++I V W ++ + I+G + +R E V+ + T+N +I L+
Sbjct: 521 SSSSIEVHWT-VDQQSQYIQGYKVLYRPS-GANHGESEWLVFEVRTPTKNSVVIPDLKKG 578
Query: 75 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI-NPTTVHVTWRYVSPSF 133
Y +K + N +G +SE +T + P S K N T + V+W+
Sbjct: 579 VNYEIKARPFFNEFQGADSEIKFAKTLEEGNAPPQSVTVSKNDGNGTAILVSWQPPPEDT 638
Query: 134 EEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 192
+ + YKV W + + N T+ G+T I L PG RY + V A + G G
Sbjct: 639 QNGMVQEYKV--WCLGNETRYHINKTVD--GSTFSVVIPSLVPGIRYSVEVAASTGAGSG 694
Query: 193 RMSSP 197
S P
Sbjct: 695 VKSEP 699
Score = 43 (20.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P +T+Q G E G P L
Sbjct: 777 TPTVTYQRGGEAVSSGGRPGL 797
>UNIPROTKB|Q9BWV1 [details] [associations]
symbol:BOC "Brother of CDO" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0044295 "axonal growth cone"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045663 "positive regulation of myoblast differentiation"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0042692 "muscle cell differentiation" evidence=TAS] [GO:0051149
"positive regulation of muscle cell differentiation" evidence=TAS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 EMBL:AY027658 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111045 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 GO:GO:0043025 EMBL:CH471052
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 GO:GO:0030426 GO:GO:0042692
Pathway_Interaction_DB:hedgehog_2pathway InterPro:IPR013098
Pfam:PF07679 GO:GO:0007224 EMBL:AY358328 EMBL:AK074556
EMBL:AK090455 EMBL:AC026329 EMBL:BC136390 IPI:IPI00465322
IPI:IPI00744645 IPI:IPI00747930 RefSeq:NP_150279.1
UniGene:Hs.591318 PDB:3N1G PDB:3N1M PDB:3N1P PDBsum:3N1G
PDBsum:3N1M PDBsum:3N1P ProteinModelPortal:Q9BWV1 SMR:Q9BWV1
IntAct:Q9BWV1 STRING:Q9BWV1 PhosphoSite:Q9BWV1 DMDM:74761309
PaxDb:Q9BWV1 PRIDE:Q9BWV1 Ensembl:ENST00000273395
Ensembl:ENST00000355385 Ensembl:ENST00000495514 GeneID:91653
KEGG:hsa:91653 UCSC:uc003dzx.3 UCSC:uc003dzz.3 CTD:91653
GeneCards:GC03P112929 HGNC:HGNC:17173 HPA:CAB025806 MIM:608708
neXtProt:NX_Q9BWV1 PharmGKB:PA143485316 eggNOG:NOG150637
HOVERGEN:HBG061102 OMA:QPDHGRL OrthoDB:EOG44TP75 PhylomeDB:Q9BWV1
EvolutionaryTrace:Q9BWV1 GenomeRNAi:91653 NextBio:77360
ArrayExpress:Q9BWV1 Bgee:Q9BWV1 CleanEx:HS_BOC
Genevestigator:Q9BWV1 GermOnline:ENSG00000144857 GO:GO:0045663
Uniprot:Q9BWV1
Length = 1114
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 59/225 (26%), Positives = 88/225 (39%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP + T++ VTW P R N + R++Y K + + +
Sbjct: 605 PPEAPDRPTISTASETSVYVTWIP----RGNGGFPIQSFRVEYKKLKKVGDWILATSAIP 660
Query: 62 TRNWAL-IVGLQPDTKYYVKVMAYNNAGEGPES--ER------YLERTYRKAPQKPPSAV 112
++ I GL+ T Y +V A N GE S R Y R Y + P P
Sbjct: 661 PSRLSVEITGLEKGTSYKFRVRALNMLGESEPSAPSRPYVVSGYSGRVYER-PVAGPYIT 719
Query: 113 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKV--RVWEVDQDMSRANDTIIPVGNTLDADI 170
+N TT+ + W Y+ S PI G+ + R + D D D + G+ I
Sbjct: 720 FTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMV--EGDKYWHSI 777
Query: 171 VDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS-GSP 214
L P Y +++ F+ GG+ S+ I E K KS G P
Sbjct: 778 SHLQPETSYDIKMQCFNEGGESEFSNVMIC----ETKARKSSGQP 818
>RGD|2928 [details] [associations]
symbol:Itgb4 "integrin, beta 4" species:10116 "Rattus norvegicus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA;ISO] [GO:0005615 "extracellular space"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=ISO;TAS]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007229
"integrin-mediated signaling pathway" evidence=IEA;TAS] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008305
"integrin complex" evidence=IEA;ISO;TAS] [GO:0009611 "response to
wounding" evidence=IEA;ISO;ISS] [GO:0009925 "basal plasma membrane"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0030056 "hemidesmosome" evidence=IEA;ISO]
[GO:0031252 "cell leading edge" evidence=IEA;ISO;ISS] [GO:0031581
"hemidesmosome assembly" evidence=IEA;ISO] [GO:0046847 "filopodium
assembly" evidence=IEA;ISO] [GO:0048870 "cell motility"
evidence=IEA;ISO;ISS] [GO:0050839 "cell adhesion molecule binding"
evidence=TAS] InterPro:IPR002035 InterPro:IPR003644
InterPro:IPR003961 InterPro:IPR012013 InterPro:IPR016201 Pfam:PF00041
Pfam:PF03160 PIRSF:PIRSF002513 PROSITE:PS50234 PROSITE:PS50853
SMART:SM00060 SMART:SM00237 SMART:SM00327 InterPro:IPR015812
InterPro:IPR012896 RGD:2928 GO:GO:0007275 GO:GO:0005938 GO:GO:0005615
GO:GO:0031252 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009611
SUPFAM:SSF49265 GO:GO:0007155 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0007229 GO:GO:0007160
GO:GO:0048870 GO:GO:0050839 GO:GO:0030056 InterPro:IPR003659
SMART:SM00423 GO:GO:0008305 InterPro:IPR002369 PANTHER:PTHR10082
Pfam:PF07965 Pfam:PF00362 PRINTS:PR01186 SMART:SM00187
SUPFAM:SSF69687 SUPFAM:SSF103575 PROSITE:PS00243 CTD:3691
eggNOG:NOG303049 HOGENOM:HOG000231105 HOVERGEN:HBG006189 KO:K06525
PANTHER:PTHR10082:SF6 EMBL:U60096 IPI:IPI00214435 PIR:JC6319
RefSeq:NP_037312.1 UniGene:Rn.198908 ProteinModelPortal:Q64632
SMR:Q64632 STRING:Q64632 PhosphoSite:Q64632 PRIDE:Q64632 GeneID:25724
KEGG:rno:25724 InParanoid:Q64632 NextBio:607829 ArrayExpress:Q64632
Genevestigator:Q64632 GermOnline:ENSRNOG00000005580 Uniprot:Q64632
Length = 1807
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ +G+R+KYW + + E A + L +
Sbjct: 1131 APQNPNAKAAGSRKIHFNWLPPP-------GKPMGYRVKYWVQGDSESEA-HLLDSKVPS 1182
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT+++ P +P + ++ T +
Sbjct: 1183 VEL-TNLYPYCDYEMKVCAYGAHGEGPYSSLVSCRTHQEVPSEP-GRLAFNVVSSTVTQL 1240
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+W P+ I Y+V V++D
Sbjct: 1241 SW--AEPAETNGEITAYEVCYGLVNED 1265
>UNIPROTKB|Q64632 [details] [associations]
symbol:Itgb4 "Integrin beta-4" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003644 InterPro:IPR003961
InterPro:IPR012013 InterPro:IPR016201 Pfam:PF00041 Pfam:PF03160
PIRSF:PIRSF002513 PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060
SMART:SM00237 SMART:SM00327 InterPro:IPR015812 InterPro:IPR012896
RGD:2928 GO:GO:0007275 GO:GO:0005938 GO:GO:0005615 GO:GO:0031252
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009611 SUPFAM:SSF49265
GO:GO:0007155 GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007229 GO:GO:0007160 GO:GO:0048870
GO:GO:0050839 GO:GO:0030056 InterPro:IPR003659 SMART:SM00423
GO:GO:0008305 InterPro:IPR002369 PANTHER:PTHR10082 Pfam:PF07965
Pfam:PF00362 PRINTS:PR01186 SMART:SM00187 SUPFAM:SSF69687
SUPFAM:SSF103575 PROSITE:PS00243 CTD:3691 eggNOG:NOG303049
HOGENOM:HOG000231105 HOVERGEN:HBG006189 KO:K06525
PANTHER:PTHR10082:SF6 EMBL:U60096 IPI:IPI00214435 PIR:JC6319
RefSeq:NP_037312.1 UniGene:Rn.198908 ProteinModelPortal:Q64632
SMR:Q64632 STRING:Q64632 PhosphoSite:Q64632 PRIDE:Q64632
GeneID:25724 KEGG:rno:25724 InParanoid:Q64632 NextBio:607829
ArrayExpress:Q64632 Genevestigator:Q64632
GermOnline:ENSRNOG00000005580 Uniprot:Q64632
Length = 1807
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ +G+R+KYW + + E A + L +
Sbjct: 1131 APQNPNAKAAGSRKIHFNWLPPP-------GKPMGYRVKYWVQGDSESEA-HLLDSKVPS 1182
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT+++ P +P + ++ T +
Sbjct: 1183 VEL-TNLYPYCDYEMKVCAYGAHGEGPYSSLVSCRTHQEVPSEP-GRLAFNVVSSTVTQL 1240
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+W P+ I Y+V V++D
Sbjct: 1241 SW--AEPAETNGEITAYEVCYGLVNED 1265
>MGI|MGI:96613 [details] [associations]
symbol:Itgb4 "integrin beta 4" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0005938 "cell
cortex" evidence=ISO] [GO:0007154 "cell communication"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0008305 "integrin
complex" evidence=IDA] [GO:0009611 "response to wounding"
evidence=ISO] [GO:0009925 "basal plasma membrane" evidence=IDA]
[GO:0009986 "cell surface" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030056
"hemidesmosome" evidence=ISO;IDA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0046847 "filopodium assembly" evidence=IMP] [GO:0048870 "cell
motility" evidence=ISO] InterPro:IPR002035 InterPro:IPR003644
InterPro:IPR003961 InterPro:IPR012013 InterPro:IPR016201
Pfam:PF00041 Pfam:PF03160 PIRSF:PIRSF002513 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00237 SMART:SM00327
InterPro:IPR015812 InterPro:IPR012896 MGI:MGI:96613 GO:GO:0007275
GO:GO:0031252 GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0009611 SUPFAM:SSF49265 GO:GO:0007155 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 EMBL:AL607108 PROSITE:PS01186
GO:GO:0007229 GO:GO:0007160 GO:GO:0048870 GO:GO:0005604
GO:GO:0046847 GO:GO:0009925 GO:GO:0030056 InterPro:IPR003659
SMART:SM00423 GO:GO:0031581 GO:GO:0008305 InterPro:IPR002369
PANTHER:PTHR10082 Pfam:PF07965 Pfam:PF00362 PRINTS:PR01186
SMART:SM00187 SUPFAM:SSF69687 SUPFAM:SSF103575 PROSITE:PS00243
GeneTree:ENSGT00700000104058 eggNOG:NOG303049 HOGENOM:HOG000231105
OMA:EDDDCTY ChiTaRS:ITGB4 PANTHER:PTHR10082:SF6 EMBL:AL645647
EMBL:BC006632 EMBL:BC025194 EMBL:BC059192 IPI:IPI00313479
IPI:IPI00480458 IPI:IPI00649251 PIR:JN0786 UniGene:Mm.213873
ProteinModelPortal:A2A863 SMR:A2A863 STRING:A2A863
PhosphoSite:A2A863 PaxDb:A2A863 PRIDE:A2A863
Ensembl:ENSMUST00000068981 Ensembl:ENSMUST00000106458
Ensembl:ENSMUST00000106460 Ensembl:ENSMUST00000106461
UCSC:uc007mji.1 InParanoid:A2A863 Bgee:A2A863 Genevestigator:A2A863
Uniprot:A2A863
Length = 1818
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ +G+R+KYW + + E A + L +
Sbjct: 1131 APQNPNAKAAGSRKIHFNWLPPP-------GKPMGYRVKYWIQGDSESEA-HLLDSKVPS 1182
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT+++ P +P + ++ T +
Sbjct: 1183 VEL-TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEP-GRLAFNVVSSTVTQL 1240
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+W P+ I Y+V V++D
Sbjct: 1241 SW--AEPAETNGEITAYEVCYGLVNED 1265
>ZFIN|ZDB-GENE-000209-3 [details] [associations]
symbol:robo1 "roundabout homolog 1" species:7955
"Danio rerio" [GO:0003262 "endocardial progenitor cell migration to
the midline involved in heart field formation" evidence=IGI]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI;IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
ZFIN:ZDB-GENE-000209-3 GO:GO:0016021 GO:GO:0007411
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013098 Pfam:PF07679
HSSP:Q9HCK4 CTD:6091 HOGENOM:HOG000010267 HOVERGEN:HBG073476
KO:K06753 GO:GO:0003262 EMBL:AF304130 IPI:IPI00490621
RefSeq:NP_571556.1 UniGene:Dr.11719 ProteinModelPortal:Q98SW4
SMR:Q98SW4 IntAct:Q98SW4 STRING:Q98SW4 PRIDE:Q98SW4 GeneID:30769
KEGG:dre:30769 NextBio:20807111 ArrayExpress:Q98SW4 Bgee:Q98SW4
Uniprot:Q98SW4
Length = 1675
Score = 134 (52.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 49/193 (25%), Positives = 88/193 (45%)
Query: 15 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLSRTTRNWALIVGLQ 72
+S+++ V W +E + I+G + +R E P+ A++ + + A++ L+
Sbjct: 649 SSSSVRVQWT-VEQQPQYIQGYKVMYRPS--PEGAPQRVDWAMFEVGAPGEHSAVVTQLK 705
Query: 73 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVS 130
Y KV + N +G +S+ + +T +AP P V + G N T V V W+
Sbjct: 706 KGITYEFKVRPFFNEFQGTDSDIKVGKTLEEAPSAAPRGVTVTGSGDNGTAVLVAWQ--P 763
Query: 131 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 190
P EE+ + + ++W + + SR + G+T I L G Y + V A + G
Sbjct: 764 PPEEEQNGVVQEYKIWCLGNE-SRYHINRTVDGSTHSVLIPGLVAGVTYRLEVAAGTGAG 822
Query: 191 DGRMSSPAITFQM 203
G S P +FQ+
Sbjct: 823 PGVKSDPT-SFQL 834
Score = 39 (18.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 196 SPAITFQMGEEKEFKSGSPAL 216
+P + +Q G E +G P L
Sbjct: 909 TPTVAYQRGGEAVSSAGRPGL 929
>UNIPROTKB|J9NXR3 [details] [associations]
symbol:J9NXR3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048870 "cell motility" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0008305
"integrin complex" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
InterPro:IPR003961 InterPro:IPR012013 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 InterPro:IPR015812 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004872 GO:GO:0007229
GO:GO:0007160 GO:GO:0008305 PANTHER:PTHR10082
GeneTree:ENSGT00700000104058 PANTHER:PTHR10082:SF6
EMBL:AAEX03006291 Ensembl:ENSCAFT00000046475 OMA:TETWATI
Uniprot:J9NXR3
Length = 818
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 51/174 (29%), Positives = 75/174 (43%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ G+R+KYW + + E A + L +
Sbjct: 63 APQNPNAKAAGSRKIHFNWLPPP-------GKPAGYRVKYWIQGDSESEA-HLLDSKVPS 114
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT ++ P +P + ++ T +
Sbjct: 115 VEL-TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTQQEVPSEP-GRLAFNVVSSTVTQL 172
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 178
+W P+ I Y+V V++D N I P+ L VD SP KR
Sbjct: 173 SWG--EPAETNGEITAYEVCYGLVNED----NRPIGPMKKVL----VD-SPKKR 215
>ZFIN|ZDB-GENE-030131-6560 [details] [associations]
symbol:boc "brother of CDO" species:7955 "Danio
rerio" [GO:0008589 "regulation of smoothened signaling pathway"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0042802 "identical
protein binding" evidence=IDA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-030131-6560 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0042802 InterPro:IPR013098
Pfam:PF07679 GO:GO:0031290 CTD:91653 HOVERGEN:HBG061102
OrthoDB:EOG44TP75 GO:GO:0008589 HOGENOM:HOG000060072 HSSP:Q10466
EMBL:AF461120 IPI:IPI00493514 RefSeq:NP_001005393.1
UniGene:Dr.151204 UniGene:Dr.75953 ProteinModelPortal:Q8UVD6
SMR:Q8UVD6 IntAct:Q8UVD6 PRIDE:Q8UVD6 GeneID:334628 KEGG:dre:334628
NextBio:20810486 ArrayExpress:Q8UVD6 Bgee:Q8UVD6 Uniprot:Q8UVD6
Length = 1032
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 55/208 (26%), Positives = 81/208 (38%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 61
P AP T+ VTW P I+ + H+ K K E AV +
Sbjct: 578 PPEAPDRPTVSMATETSAYVTWIPRGNRGFPIQSFRVEHK-KLRKGSGDWEVAVNNIP-P 635
Query: 62 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG----- 116
+R + GL+ T Y +V+A N G P S + Y PP+ I G
Sbjct: 636 SRLSVEVTGLEKGTSYKFRVLAVNVLGASPPSAP--SKAYTVVGSGPPNRRPIDGPYITY 693
Query: 117 ---INPTTVHVTWRYVSPSFEEEPIIGYKV--RVWEVDQDMSRANDTIIPVGNTLDADIV 171
IN TT+ + W Y +P PI G+ + R + D D D + G+ I
Sbjct: 694 NEAINETTIILKWTY-TP-LNNTPIYGFYIFYRPTDSDNDSDYKKDVV--EGDRYWHSIT 749
Query: 172 DLSPGKRYHMRVLAFSNGGDGRMSSPAI 199
DL P Y +++ F+ GG+ + I
Sbjct: 750 DLQPETAYDIKMQCFNEGGESEFGNVVI 777
>UNIPROTKB|P16144 [details] [associations]
symbol:ITGB4 "Integrin beta-4" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007229
"integrin-mediated signaling pathway" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0008305 "integrin complex"
evidence=IEA] [GO:0009925 "basal plasma membrane" evidence=IEA]
[GO:0046847 "filopodium assembly" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly"
evidence=IDA;TAS] [GO:0009611 "response to wounding" evidence=IDA]
[GO:0048870 "cell motility" evidence=IMP] [GO:0031252 "cell leading
edge" evidence=IDA] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0005886 "plasma membrane" evidence=IDA;TAS] [GO:0034329 "cell
junction assembly" evidence=TAS] [GO:0009986 "cell surface"
evidence=IDA] InterPro:IPR002035 InterPro:IPR003644
InterPro:IPR003961 InterPro:IPR012013 InterPro:IPR016201
Pfam:PF00041 Pfam:PF03160 PIRSF:PIRSF002513 PROSITE:PS50234
PROSITE:PS50853 SMART:SM00060 SMART:SM00237 SMART:SM00327
InterPro:IPR015812 InterPro:IPR012896 Reactome:REACT_118779
GO:GO:0007275 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0031252 GO:GO:0009986 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0009611 SUPFAM:SSF49265 GO:GO:0007155
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 EMBL:CH471099
Reactome:REACT_111155 PROSITE:PS01186 GO:GO:0007229 GO:GO:0007160
GO:GO:0048870 GO:GO:0005604 GO:GO:0046847 GO:GO:0009925
GO:GO:0030056 InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974
SMART:SM00423 GO:GO:0031581 MIM:226650 Orphanet:79402 GO:GO:0008305
MIM:226730 Orphanet:79403 InterPro:IPR002369 PANTHER:PTHR10082
Pfam:PF07965 Pfam:PF00362 PRINTS:PR01186 SMART:SM00187
SUPFAM:SSF69687 SUPFAM:SSF103575 PROSITE:PS00243 EMBL:X51841
EMBL:X52186 EMBL:X53587 EMBL:U66541 EMBL:U66530 EMBL:U66531
EMBL:U66532 EMBL:U66533 EMBL:U66534 EMBL:U66535 EMBL:U66536
EMBL:U66537 EMBL:U66538 EMBL:U66539 EMBL:U66540 EMBL:AC087749
EMBL:BC126411 EMBL:AJ251004 EMBL:Y11107 EMBL:AF011375 EMBL:AF011376
IPI:IPI00027422 IPI:IPI00220845 IPI:IPI00220846 IPI:IPI00220847
IPI:IPI00220848 PIR:JC5545 PIR:S12380 RefSeq:NP_000204.3
RefSeq:NP_001005619.1 RefSeq:NP_001005731.1 UniGene:Hs.632226
PDB:1QG3 PDB:2YRZ PDB:3F7P PDB:3F7Q PDB:3F7R PDB:3FQ4 PDB:3FSO
PDB:3H6A PDBsum:1QG3 PDBsum:2YRZ PDBsum:3F7P PDBsum:3F7Q
PDBsum:3F7R PDBsum:3FQ4 PDBsum:3FSO PDBsum:3H6A
ProteinModelPortal:P16144 SMR:P16144 IntAct:P16144
MINT:MINT-5004072 STRING:P16144 PhosphoSite:P16144 DMDM:13638154
PaxDb:P16144 PRIDE:P16144 Ensembl:ENST00000200181
Ensembl:ENST00000339591 Ensembl:ENST00000449880
Ensembl:ENST00000450894 Ensembl:ENST00000579662 GeneID:3691
KEGG:hsa:3691 UCSC:uc002jpg.3 UCSC:uc002jpj.3 UCSC:uc010dgo.3
UCSC:uc010dgp.1 CTD:3691 GeneCards:GC17P073717 H-InvDB:HIX0039036
HGNC:HGNC:6158 HPA:CAB002422 HPA:CAB005258 MIM:147557
neXtProt:NX_P16144 PharmGKB:PA29957 eggNOG:NOG303049
HOGENOM:HOG000231105 HOVERGEN:HBG006189 InParanoid:P16144 KO:K06525
OMA:EDDDCTY PhylomeDB:P16144 ChiTaRS:ITGB4 EvolutionaryTrace:P16144
GenomeRNAi:3691 NextBio:14457 Bgee:P16144 CleanEx:HS_ITGB4
Genevestigator:P16144 GermOnline:ENSG00000132470
PANTHER:PTHR10082:SF6 Uniprot:P16144
Length = 1822
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/147 (27%), Positives = 65/147 (44%)
Query: 5 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 64
APQ ++ S I+ W P G+ +G+R+KYW + + E A + L +
Sbjct: 1129 APQNPNAKAAGSRKIHFNWLPPS-------GKPMGYRVKYWIQGDSESEA-HLLDSKVPS 1180
Query: 65 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 124
L L P Y +KV AY GEGP S RT+++ P +P + ++ T +
Sbjct: 1181 VEL-TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEP-GRLAFNVVSSTVTQL 1238
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQD 151
+W P+ I Y+V V+ D
Sbjct: 1239 SW--AEPAETNGEITAYEVCYGLVNDD 1263
>ZFIN|ZDB-GENE-021115-4 [details] [associations]
symbol:cdon "cell adhesion
molecule-related/down-regulated by oncogenes" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-021115-4
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00680000099752
CTD:50937 HOGENOM:HOG000060072 HOVERGEN:HBG081073 OMA:EGSKQWH
OrthoDB:EOG4GTKC2 EMBL:CR925719 EMBL:BX908388 EMBL:BC133076
IPI:IPI00771229 RefSeq:NP_001075097.1 UniGene:Dr.75153 SMR:Q1L8D0
Ensembl:ENSDART00000087339 GeneID:280652 KEGG:dre:280652
InParanoid:Q1L8D0 NextBio:20804862 Uniprot:Q1L8D0
Length = 1125
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 49/209 (23%), Positives = 90/209 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P+ + S S+ + VTW P R N + R++Y K+ + + +
Sbjct: 593 VPEAPDRPTISMATESS-VYVTWIP----RANGGSPITAFRVEYRKQGRNGDWIIAADNI 647
Query: 61 TTRNWALIV-GLQPDTKYYVKVMAYNNAGEGPES--ERYLERTYRKAP--QKPPSAVHIK 115
+ ++ V L+P + Y +V+A NN GE P S R + + +P +P + HI
Sbjct: 648 SPLKLSVEVRNLEPGSTYRFRVIAMNNYGESPASATSRPYQVSMSSSPVSNRPVTGPHIS 707
Query: 116 G---INPTTVHVTWRYVSPSFEEEPIIGYKV--RVWEVDQDMSRANDTIIPVGNTLDADI 170
++ T + + W Y S PI G+ + R + D D D + G I
Sbjct: 708 STDAVSDTQILLRWTYTPSSNNNTPIQGFYIYYRPTDSDNDSDYKKDVV--EGFKFWHMI 765
Query: 171 VDLSPGKRYHMRVLAFSNGGDGRMSSPAI 199
+L P Y +++ +++GG+ S+ I
Sbjct: 766 GELQPETSYDIKMQCYNDGGESEYSNVMI 794
>UNIPROTKB|F1SS24 [details] [associations]
symbol:FN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0018149
"peptide cross-linking" evidence=IEA] [GO:0016504 "peptidase
activator activity" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IEA] [GO:0007161 "calcium-independent
cell-matrix adhesion" evidence=IEA] [GO:0007044 "cell-substrate
junction assembly" evidence=IEA] [GO:0005793 "endoplasmic
reticulum-Golgi intermediate compartment" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005577 "fibrinogen complex"
evidence=IEA] InterPro:IPR000083 InterPro:IPR003961 Pfam:PF00039
Pfam:PF00041 PROSITE:PS01253 PROSITE:PS50853 PROSITE:PS51091
SMART:SM00058 SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0005577 GO:GO:0016504
GO:GO:0042060 GO:GO:0034446 GO:GO:0005604 GO:GO:0005793
GO:GO:0018149 InterPro:IPR013806 SUPFAM:SSF57440 Gene3D:2.10.10.10
InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023
PROSITE:PS51092 GeneTree:ENSGT00700000104067 GO:GO:0007044 CTD:2335
KO:K05717 OMA:IPGHLNS GO:GO:0007161 EMBL:CU861921
RefSeq:XP_003133690.1 UniGene:Ssc.16743 Ensembl:ENSSSCT00000017610
GeneID:397620 KEGG:ssc:397620 ArrayExpress:F1SS24 Uniprot:F1SS24
Length = 2478
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 41/157 (26%), Positives = 67/157 (42%)
Query: 37 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 96
+ G+RI Y + E ++ T N + LQP +Y + + A E
Sbjct: 839 ITGYRIVY--SPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQ 896
Query: 97 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN 156
E T P K P ++ + T V VT + P E P+ GY+V V V+ + +
Sbjct: 897 QETTGVPRPDKVPPPKDLQFVEVTDVKVTIMWTPP---ESPVTGYRVDVIPVN--LPGEH 951
Query: 157 DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 193
+P+ A++ LSPG YH +V A + G + +
Sbjct: 952 GQRLPISRNTFAEVTGLSPGVTYHFKVFAVNQGRESK 988
>MGI|MGI:1202390 [details] [associations]
symbol:Igdcc3 "immunoglobulin superfamily, DCC subclass,
member 3" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:1202390 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
GO:GO:0050885 InterPro:IPR013098 Pfam:PF07679 CTD:9543
eggNOG:NOG260922 HOGENOM:HOG000113008 OMA:FAVEPSD OrthoDB:EOG4R7V95
EMBL:AK051027 EMBL:BC053057 EMBL:AF026465 EMBL:AF026466
IPI:IPI00223742 IPI:IPI00515418 RefSeq:NP_033014.1
UniGene:Mm.392333 UniGene:Mm.41529 UniGene:Mm.453118
ProteinModelPortal:Q8BQC3 SMR:Q8BQC3 IntAct:Q8BQC3
PhosphoSite:Q8BQC3 PRIDE:Q8BQC3 Ensembl:ENSMUST00000034961
GeneID:19289 KEGG:mmu:19289 UCSC:uc009qcv.1 UCSC:uc009qcw.1
GeneTree:ENSGT00680000099868 InParanoid:Q8BQC3 NextBio:296218
Bgee:Q8BQC3 CleanEx:MM_PUNC Genevestigator:Q8BQC3
GermOnline:ENSMUSG00000032394 Uniprot:Q8BQC3
Length = 813
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 49/204 (24%), Positives = 93/204 (45%)
Query: 6 PQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTR 63
P+ V + +ST + V+W+ P+ +E +IG+ + K D+P+ +S++T
Sbjct: 439 PRNVRAVSVSSTEVRVSWSEPLAHTKE-----IIGYVLHIRKAADSPKLEYQEAVSKSTF 493
Query: 64 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 123
L+ L+P T Y + AY G S L T +AP PP +V + G +++
Sbjct: 494 QH-LVRDLEPSTAYSFYIKAYTPRGASLASVPTLASTLGEAPVPPPLSVRLLG--SSSLQ 550
Query: 124 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 183
+ W+ P + G+K+ V S ++P G ++ L P Y +++
Sbjct: 551 LLWK-PWPRLAQHNG-GFKLFYRPVSAT-SFTGPILLP-GTVSSYNLSQLDPSTVYEVKL 606
Query: 184 LAFSNGGDGRMSSPAITFQMGEEK 207
LA++ GDG + ++ + E+
Sbjct: 607 LAYNQHGDGNATVRFVSLKGASER 630
>UNIPROTKB|F1NLR2 [details] [associations]
symbol:TYRO3 "Tyrosine-protein kinase receptor TYRO3"
species:9031 "Gallus gallus" [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001779
"natural killer cell differentiation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0021885 "forebrain cell
migration" evidence=IEA] [GO:0032940 "secretion by cell"
evidence=IEA] [GO:0034122 "negative regulation of toll-like
receptor signaling pathway" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042698
"ovulation cycle" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0045824 "negative regulation
of innate immune response" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0051250
"negative regulation of lymphocyte activation" evidence=IEA]
[GO:0060068 "vagina development" evidence=IEA] [GO:0070050 "neuron
homeostasis" evidence=IEA] [GO:0070527 "platelet aggregation"
evidence=IEA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003961 InterPro:IPR007110 InterPro:IPR008266
InterPro:IPR011009 InterPro:IPR017441 InterPro:IPR020635
Pfam:PF00041 Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107
PROSITE:PS00109 PROSITE:PS50011 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 SMART:SM00219 GO:GO:0016021 GO:GO:0005524
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0032940 GO:GO:0070050
GO:GO:0050728 SUPFAM:SSF49265 SUPFAM:SSF56112 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0043524
GO:GO:0046777 GO:GO:0004713 GO:GO:0043491 InterPro:IPR013098
Pfam:PF07679 GO:GO:0034122 GO:GO:0043277 GO:GO:0045824
GO:GO:0051250 GeneTree:ENSGT00550000074361 IPI:IPI00575698
OMA:HAGQQGP EMBL:AADN02033542 EMBL:AADN02033543 EMBL:AADN02033544
Ensembl:ENSGALT00000014067 Uniprot:F1NLR2
Length = 872
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
+ GL+ T Y V+V N G P +ER +T AP P +H+ +P V + W
Sbjct: 272 VQGLKHSTNYSVRVQCSNEMGSSPFTERVYFQTLELAPSSTPQNIHVIQRDPGLV-LEWE 330
Query: 128 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 187
V+P +E ++GY++ W QD + I+ +T A++ +P K +RV +
Sbjct: 331 GVAPDVLKENVLGYRLE-WI--QDNVTQGEMIVQ--DT-KANLTTWNPLKDLIIRVCVLN 384
Query: 188 NGGDGRMS 195
+ G G S
Sbjct: 385 SAGCGPWS 392
>UNIPROTKB|Q98949 [details] [associations]
symbol:TYRO3 "Tyrosine-protein kinase receptor TYRO3"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004714 "transmembrane
receptor protein tyrosine kinase activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003961 InterPro:IPR007110
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR017441
InterPro:IPR020635 Pfam:PF00041 Pfam:PF07714 PRINTS:PR00109
PROSITE:PS00107 PROSITE:PS00109 PROSITE:PS50011 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 SMART:SM00219 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 Gene3D:2.60.40.10 InterPro:IPR013783
eggNOG:COG0515 GO:GO:0004714 SUPFAM:SSF49265 SUPFAM:SSF56112
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 HSSP:Q06418
HOGENOM:HOG000231685 HOVERGEN:HBG006346 EMBL:U70045 IPI:IPI00575698
RefSeq:NP_989958.1 UniGene:Gga.4266 ProteinModelPortal:Q98949
SMR:Q98949 STRING:Q98949 GeneID:395336 KEGG:gga:395336 CTD:7301
InParanoid:Q98949 KO:K05116 OrthoDB:EOG4H4639 NextBio:20815421
Uniprot:Q98949
Length = 873
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 68 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 127
+ GL+ T Y V+V N G P +ER +T AP P +H+ +P V + W
Sbjct: 273 VQGLKHSTNYSVRVQCSNEMGSSPFTERVYFQTLELAPSSTPQNIHVIQRDPGLV-LEWE 331
Query: 128 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 187
V+P +E ++GY++ W QD + I+ +T A++ +P K +RV +
Sbjct: 332 GVAPDVLKENVLGYRLE-WI--QDNVTQGEMIVQ--DT-KANLTTWNPLKDLIIRVCVLN 385
Query: 188 NGGDGRMS 195
+ G G S
Sbjct: 386 SAGCGPWS 393
>UNIPROTKB|Q96MS0 [details] [associations]
symbol:ROBO3 "Roundabout homolog 3" species:9606 "Homo
sapiens" [GO:0001764 "neuron migration" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0007411 "axon guidance"
evidence=NAS;TAS] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0016199 "axon midline choice point recognition" evidence=ISS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 GO:GO:0016021 Reactome:REACT_111045
GO:GO:0001764 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 GO:GO:0016199
InterPro:IPR013098 Pfam:PF07679 eggNOG:NOG238978
HOGENOM:HOG000010267 HOVERGEN:HBG073476 EMBL:AY509035 EMBL:AK056544
IPI:IPI00007176 IPI:IPI00418275 RefSeq:NP_071765.2
UniGene:Hs.435621 ProteinModelPortal:Q96MS0 SMR:Q96MS0
IntAct:Q96MS0 STRING:Q96MS0 PhosphoSite:Q96MS0 DMDM:49036492
PRIDE:Q96MS0 DNASU:64221 Ensembl:ENST00000397801 GeneID:64221
KEGG:hsa:64221 UCSC:uc001qbc.3 CTD:64221 GeneCards:GC11P124735
HGNC:HGNC:13433 HPA:HPA011310 MIM:607313 MIM:608630
neXtProt:NX_Q96MS0 Orphanet:2744 PharmGKB:PA134896648
InParanoid:Q96MS0 KO:K06755 OMA:PQLVTQP OrthoDB:EOG41VK24
ChiTaRS:ROBO3 GenomeRNAi:64221 NextBio:66147 ArrayExpress:Q96MS0
Bgee:Q96MS0 CleanEx:HS_ROBO3 Genevestigator:Q96MS0 Uniprot:Q96MS0
Length = 1386
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 51/201 (25%), Positives = 86/201 (42%)
Query: 19 INVTWN---PIELIRENIRGRLIGHRIKYWKEDNPE--ETAVYYLSRTTRNWALIVGLQP 73
+ V+W P++L++ G R+ W+ PE + L ++ ++ GL P
Sbjct: 686 LQVSWTVDGPVQLVQ--------GFRVS-WRVAGPEGGSWTMLDLQSPSQQSTVLRGLPP 736
Query: 74 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSP 131
T+ +KV A G G ES +AP PP AV + G +++ V+W P
Sbjct: 737 GTQIQIKVQAQGQEGLGAESLSVTRSIPEEAPSGPPQGVAVALGGDGNSSITVSWEPPLP 796
Query: 132 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 191
S + I Y++ W + + SR + G A + L PG Y V A ++ G
Sbjct: 797 SQQNGVITEYQI--WCLGNE-SRFHLNRSAAGWARSAMLRGLVPGLLYRTLVAAATSAGV 853
Query: 192 GRMSSPAITFQMGEEKEFKSG 212
G S+P + Q+ + + G
Sbjct: 854 GVPSAPVLV-QLPSPPDLEPG 873
>UNIPROTKB|Q63HQ2 [details] [associations]
symbol:EGFLAM "Pikachurin" species:9606 "Homo sapiens"
[GO:0030054 "cell junction" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005614 "interstitial matrix"
evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IEA] [GO:0019800 "peptide cross-linking via
chondroitin 4-sulfate glycosaminoglycan" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] InterPro:IPR000742 InterPro:IPR003961
Pfam:PF00008 Pfam:PF00041 PROSITE:PS50026 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 SUPFAM:SSF49265 GO:GO:0030198 GO:GO:0045202
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 GO:GO:0010811 InterPro:IPR001791 Pfam:PF00054
SMART:SM00282 PROSITE:PS50025 GO:GO:0005604 GO:GO:0005614
EMBL:CH471119 Pfam:PF02210 HSSP:P00740 CTD:133584
HOVERGEN:HBG107839 OrthoDB:EOG434W58 EMBL:AK092479 EMBL:AK092994
EMBL:AK096474 EMBL:AK097549 EMBL:AK291602 EMBL:BX647551
EMBL:AC010338 EMBL:AC010457 EMBL:AC091839 EMBL:BC031251
EMBL:BC033177 EMBL:BC033188 EMBL:BC063822 IPI:IPI00334254
IPI:IPI00376634 IPI:IPI00470484 IPI:IPI00743096 IPI:IPI00867652
RefSeq:NP_001192230.1 RefSeq:NP_689616.2 RefSeq:NP_877950.1
RefSeq:NP_877953.1 UniGene:Hs.20103 ProteinModelPortal:Q63HQ2
SMR:Q63HQ2 STRING:Q63HQ2 PhosphoSite:Q63HQ2 DMDM:158705944
PaxDb:Q63HQ2 PRIDE:Q63HQ2 Ensembl:ENST00000322350
Ensembl:ENST00000336740 Ensembl:ENST00000354891
Ensembl:ENST00000397202 Ensembl:ENST00000397210
Ensembl:ENST00000506135 Ensembl:ENST00000514476 GeneID:133584
KEGG:hsa:133584 UCSC:uc003jlb.2 UCSC:uc003jlc.2 UCSC:uc003jle.2
UCSC:uc003jlf.2 UCSC:uc003jlg.2 GeneCards:GC05P038295
HGNC:HGNC:26810 neXtProt:NX_Q63HQ2 PharmGKB:PA147358056
eggNOG:NOG238064 InParanoid:Q63HQ2 OMA:FMRFKTT ChiTaRS:EGFLAM
GenomeRNAi:133584 NextBio:83236 ArrayExpress:Q63HQ2 Bgee:Q63HQ2
CleanEx:HS_EGFLAM Genevestigator:Q63HQ2 GO:GO:0005539 GO:GO:0019800
Uniprot:Q63HQ2
Length = 1017
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 37/124 (29%), Positives = 54/124 (43%)
Query: 97 LERTYRKAPQK--PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 154
L RK P K PP + + +N T + W+ P PI+GY V EV D S
Sbjct: 25 LRAAIRK-PGKVGPPLDIKLGALNCTAFSIQWKM--PRHPGSPILGYTVFYSEVGADKSL 81
Query: 155 ANDT-IIPVGN---TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 210
+P+ T + I DL PG Y + + A+S G GR+SSP + ++
Sbjct: 82 QEQLHSVPLSRDIPTTEEVIGDLKPGTEYRVSIAAYSQAGKGRLSSPRHVTTLSQDSCLP 141
Query: 211 SGSP 214
+P
Sbjct: 142 PAAP 145
>UNIPROTKB|Q91694 [details] [associations]
symbol:epha4-b "Ephrin type-A receptor 4-B" species:8355
"Xenopus laevis" [GO:0005004 "GPI-linked ephrin receptor activity"
evidence=ISS] [GO:0005005 "transmembrane-ephrin receptor activity"
evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=ISS]
[GO:0032314 "regulation of Rac GTPase activity" evidence=ISS]
[GO:0032317 "regulation of Rap GTPase activity" evidence=ISS]
InterPro:IPR000719 InterPro:IPR001090 InterPro:IPR001245
InterPro:IPR001426 InterPro:IPR001660 InterPro:IPR003961
InterPro:IPR008266 InterPro:IPR011009 InterPro:IPR011510
InterPro:IPR016257 InterPro:IPR017441 InterPro:IPR020635
Pfam:PF00041 Pfam:PF01404 Pfam:PF07647 Pfam:PF07714
PIRSF:PIRSF000666 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00109
PROSITE:PS00790 PROSITE:PS00791 PROSITE:PS50011 PROSITE:PS50105
PROSITE:PS50853 PROSITE:PS51550 SMART:SM00060 SMART:SM00219
SMART:SM00454 SMART:SM00615 GO:GO:0005524 GO:GO:0007399
GO:GO:0031901 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
BRENDA:2.7.10.1 SUPFAM:SSF49265 SUPFAM:SSF56112 GO:GO:0007155
PROSITE:PS01186 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0032314
GO:GO:0032317 GO:GO:0005005 HOVERGEN:HBG062180 GO:GO:0005004
EMBL:L26099 PIR:I51549 UniGene:Xl.13 ProteinModelPortal:Q91694
SMR:Q91694 Xenbase:XB-GENE-1015806 Uniprot:Q91694
Length = 985
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 57/207 (27%), Positives = 89/207 (42%)
Query: 2 PQVAPQGVFSRGFNSTAINVTWNPIELI--RENIRGRLIGHRI-KYWKEDNPEETAVYYL 58
P APQ + S N T++N+ W+P + R ++ L+ R +P + V+Y
Sbjct: 328 PPSAPQNLISN-VNETSVNLEWSPPQNSGGRPDVSYNLVCKRCGSDLTRCSPCGSGVHYS 386
Query: 59 S-----RTTRNWALIVGLQPDTKYYVKVMAYNNAG-EGPESERYLERTYRKAPQKPPSAV 112
+TT+ I LQ T Y +V A N + PE ++ + T P +
Sbjct: 387 PQQNGLKTTK--VSINDLQAHTNYTFEVWAINGVSKQNPEQDQAVSVTVTTNQAAPSTVT 444
Query: 113 HI--KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADI 170
I K I +V +TW P I+ Y+V+ +E DQ+ R+ I+ + ADI
Sbjct: 445 QIQPKEITRHSVSLTWP--EPERANGVILEYEVKYYEKDQN-ERSY-RIVKTASR-SADI 499
Query: 171 VDLSPGKRYHMRVLAFSNGGDGRMSSP 197
L+P Y V A + G G S P
Sbjct: 500 KGLNPLTGYVFHVRARTAAGYGEFSGP 526
>ZFIN|ZDB-GENE-001019-1 [details] [associations]
symbol:robo2 "roundabout homolog 2" species:7955
"Danio rerio" [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IGI;IMP] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IMP] [GO:0016199 "axon midline
choice point recognition" evidence=IGI] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 ZFIN:ZDB-GENE-001019-1 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 GO:GO:0016199 GO:GO:0042802
GO:GO:0050772 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007413
GO:GO:0007156 GO:GO:0001656 GO:GO:0001657 GO:GO:0031290
GO:GO:0051964 HSSP:Q9HCK4 GO:GO:0048843 HOGENOM:HOG000010267
HOVERGEN:HBG073476 GO:GO:0021891 CTD:6092 KO:K06754 GO:GO:0033564
EMBL:AF337035 EMBL:CU638815 IPI:IPI00902335 RefSeq:NP_571708.1
UniGene:Dr.83334 SMR:Q90Z70 IntAct:Q90Z70 STRING:Q90Z70
GeneID:60309 KEGG:dre:60309 InParanoid:Q90Z70 NextBio:20892416
Uniprot:Q90Z70
Length = 1513
Score = 127 (49.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 52/202 (25%), Positives = 89/202 (44%)
Query: 17 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 76
T I VTW ++ + I+G + +R + +P + + ++ L+
Sbjct: 657 TTIQVTWT-VDRQSQFIQGYRVLYR-QMSGLSSPGAWQTQDVKVPSERSMVLSALKKGIV 714
Query: 77 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI---NPTTVHVTWRYVSPSF 133
Y +KV Y N +G +SE RT +AP PP V + + N T++ ++W P
Sbjct: 715 YEIKVRPYFNEFQGMDSESRTARTTEEAPSAPPQQVTVLTVGNQNSTSISISWD--PPPA 772
Query: 134 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-----LSPGKRYHMRVLAFSN 188
E + I + ++W + N+T V T+DA I L G +Y + V A ++
Sbjct: 773 EHQNGIIQEYKIWCL------GNETRFHVNKTVDAAIRSVVVGGLQAGVQYRVEVAASTS 826
Query: 189 GGDGRMSSPAITFQMGEEKEFK 210
G G S P T +G K+F+
Sbjct: 827 AGVGVKSEPQ-TIIIG--KDFR 845
>RGD|1311673 [details] [associations]
symbol:Fndc3b "fibronectin type III domain containing 3B"
species:10116 "Rattus norvegicus" [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0045600 "positive regulation of
fat cell differentiation" evidence=IEA;ISO] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 RGD:1311673
GO:GO:0005783 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
GO:GO:0045600 GeneTree:ENSGT00530000063598 OrthoDB:EOG4DFPMN
IPI:IPI00360982 ProteinModelPortal:D4A0W7
Ensembl:ENSRNOT00000034096 UCSC:RGD:1311673 Uniprot:D4A0W7
Length = 1182
Score = 126 (49.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 46/153 (30%), Positives = 67/153 (43%)
Query: 45 WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKA 104
W ED +Y+ T I L P +Y ++ A+N AG GP SE +T A
Sbjct: 782 WGEDEESLELIYHGPDTCFE---IRDLLPAAQYCCRLQAFNPAGAGPYSELVHCQTPASA 838
Query: 105 PQKPPSAVHIKGINPTTVHVTWRYVSPSFE-EEPII-GYKVRVWEVDQDMSRANDTIIPV 162
P P S + + P + H+ V EEP G ++ + +D DT I V
Sbjct: 839 PD-PVSTLCVLEEEPLSAHLDSPSVCLVLTWEEPCSNGSEIIAYNID-----LGDTCITV 892
Query: 163 GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 195
GNT + +L P Y +R+ A ++ GDG S
Sbjct: 893 GNTTTHVLKNLLPETTYRIRIQAVNDIGDGPFS 925
>ZFIN|ZDB-GENE-050419-183 [details] [associations]
symbol:ptprq "protein tyrosine phosphatase,
receptor type, Q" species:7955 "Danio rerio" [GO:0016311
"dephosphorylation" evidence=IEA] [GO:0016791 "phosphatase
activity" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004725 "protein tyrosine phosphatase activity"
evidence=IEA] InterPro:IPR000242 InterPro:IPR000387
InterPro:IPR003961 InterPro:IPR016130 Pfam:PF00041 Pfam:PF00102
PRINTS:PR00700 PROSITE:PS00383 PROSITE:PS50055 PROSITE:PS50056
PROSITE:PS50853 SMART:SM00060 SMART:SM00194
ZFIN:ZDB-GENE-050419-183 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 GO:GO:0004725 GO:GO:0035335 eggNOG:COG5599
GeneTree:ENSGT00700000104166 HOVERGEN:HBG108308 OrthoDB:EOG4P2Q3H
EMBL:AL928990 IPI:IPI00502857 UniGene:Dr.155412
Ensembl:ENSDART00000143740 Uniprot:A8DZA4
Length = 2301
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 55/210 (26%), Positives = 94/210 (44%)
Query: 7 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 66
Q V + +ST+I V+W P L N G++ + + + ++ + ++ TT A
Sbjct: 578 QNVSYQNLSSTSIRVSWEP-PL---NPNGKITHYAV--YAQNLLTNQELRQMTDTTT--A 629
Query: 67 LIVGLQPDTKYYVKVMAYNNAGEGP-ESERYLER-TYRKAPQKPPSAVHIKGINPTTVHV 124
++ GL + Y V+V A GE P +E Y+ T P PP + I +T +
Sbjct: 630 VLTGLDKYSSYKVRVAASTAVGESPLTNEDYIYVVTLEDVPDSPPRGLTIVKTTSSTATL 689
Query: 125 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 184
+W SP E+P G +R++E+ ++T+ + A + L P Y++ V
Sbjct: 690 SW---SPP--EKPN-GI-IRMYEISYTNGTYSNTVN--STSASATLRYLKPHTHYNVTVR 740
Query: 185 AFSNGGDGRMSSPAITFQMGEEKEFKSGSP 214
AF+ G G S + GE+ GSP
Sbjct: 741 AFTLLGHGEQISETLQMLSGEDVP---GSP 767
Score = 127 (49.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 38/165 (23%), Positives = 72/165 (43%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P + S+++NV+W+P L G ++ + ++YW A L++
Sbjct: 763 VPGSPPYDLSYESIGSSSVNVSWSPPLLAN----GVILFYNVEYWN-------ATQSLNQ 811
Query: 61 TTRN-WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE-RTYRKAPQKPPSAVHIKGIN 118
TT + ++ L+ Y + V A G G + L T P PP + + ++
Sbjct: 812 TTHMPYIVLSNLRKYAHYRISVQAATQVGMGNHTSEILNITTLEDVPSSPPKFLIARKLS 871
Query: 119 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD-MSRANDTIIPV 162
T V ++W +P I+ Y VRVW + + ++ +T + V
Sbjct: 872 DTEVELSWE--APEEANSEILYYIVRVWNLSTEFVANVTETSVVV 914
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 49/206 (23%), Positives = 81/206 (39%)
Query: 1 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 60
+P P ++ +ST+I V+W P + N G +I + + P + Y S
Sbjct: 1149 VPSSPPLSGSNKNLSSTSIQVSWFPP--VEAN--GEIIEYAVNL---QGPSTSNKNYTSE 1201
Query: 61 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 120
T ++ L P T Y + + A G GP L T P PP + I
Sbjct: 1202 TH---LVLSELTPFTPYNLSIAAVTRVGTGPPVVLSLH-TDEAGPMSPPRNLTIFNHTAN 1257
Query: 121 TVHVTWRYVSPSFEEEPIIG-YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 179
+V + W PS E ++ Y R+ E++ D R ++ + A++ P Y
Sbjct: 1258 SVWLQWE---PSPEPNGVVQLYGFRILELNTDSFRYQNSS---DASTQAELGGFKPHNSY 1311
Query: 180 HMRVLAFSNGGDGRMSSPAITFQMGE 205
+ V F+ G+G S + F E
Sbjct: 1312 EISVCTFTRAGNGDQYSLPVLFTTNE 1337
>ZFIN|ZDB-GENE-030131-7209 [details] [associations]
symbol:itgb4 "integrin, beta 4" species:7955
"Danio rerio" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0031581 "hemidesmosome
assembly" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0008305 "integrin complex" evidence=IEA]
[GO:0048870 "cell motility" evidence=IEA] [GO:0007154 "cell
communication" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR002035
InterPro:IPR003644 InterPro:IPR003961 InterPro:IPR012013
InterPro:IPR016201 Pfam:PF00041 Pfam:PF03160 PROSITE:PS50853
SMART:SM00060 SMART:SM00181 SMART:SM00327 InterPro:IPR015812
InterPro:IPR012896 ZFIN:ZDB-GENE-030131-7209 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007229 GO:GO:0007160
InterPro:IPR003659 SMART:SM00423 GO:GO:0008305 InterPro:IPR002369
PANTHER:PTHR10082 Pfam:PF07965 Pfam:PF00362 PRINTS:PR01186
SMART:SM00187 SUPFAM:SSF69687 SUPFAM:SSF103575 PROSITE:PS00243
CTD:3691 eggNOG:NOG303049 HOGENOM:HOG000231105 HOVERGEN:HBG006189
KO:K06525 PANTHER:PTHR10082:SF6 EMBL:DQ022377 IPI:IPI00607360
RefSeq:NP_001019557.1 UniGene:Dr.82238 ProteinModelPortal:Q4U0S1
SMR:Q4U0S1 STRING:Q4U0S1 GeneID:335269 KEGG:dre:335269
InParanoid:Q4U0S1 OrthoDB:EOG4T1HKK NextBio:20810757
ArrayExpress:Q4U0S1 Uniprot:Q4U0S1
Length = 1893
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 40/157 (25%), Positives = 71/157 (45%)
Query: 39 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 98
G+++KYW +PE+ A + +T + A + L P Y ++V YN G+G S+
Sbjct: 1267 GYKVKYWIYGDPEDKAKFMDVKTPQ--AELTNLDPYCDYEMRVCGYNALGDGNYSDIIQC 1324
Query: 99 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 158
+T P +P + I+PT V+W P+ I GY+V +++D
Sbjct: 1325 QTLEDIPGEP-GRLAFNVISPTVTQVSW--AEPAEANGIITGYEVIYMPINEDKKPTGPP 1381
Query: 159 I-IPVGNTLDADIV--DLSPGKRYHMRVLAFSNGGDG 192
+ + N ++ +L P + Y +V A + G G
Sbjct: 1382 KKVMIDNPKKRMLLIENLQPSQTYCYKVRASNKVGWG 1418
WARNING: HSPs involving 37 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 238 224 0.00099 112 3 11 22 0.42 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 287
No. of states in DFA: 586 (62 KB)
Total size of DFA: 191 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.59u 0.11s 21.70t Elapsed: 00:00:09
Total cpu time: 21.71u 0.11s 21.82t Elapsed: 00:00:10
Start: Thu Aug 15 14:56:55 2013 End: Thu Aug 15 14:57:05 2013
WARNINGS ISSUED: 2