BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14889
(443 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 464 bits (1193), Expect = e-131, Method: Compositional matrix adjust.
Identities = 212/321 (66%), Positives = 260/321 (80%)
Query: 108 STLREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIF 167
STL + LD +QRT+A+QI+L EC+GKGRYGEVWRG W GENVAVKIF
Sbjct: 9 STLADLLDHSCTSGSGSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIF 68
Query: 168 FSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR 227
SRDE SW RETE+Y+TV+LRHENILG+I SDMTSR+S TQLWL+THYH GSLYD+L
Sbjct: 69 SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL 128
Query: 228 TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
TTL+ ++I LSI +GL HLH EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GL
Sbjct: 129 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
Query: 288 AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
AV +SQ +N++D+ NPRVGTKRYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR
Sbjct: 189 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
Query: 348 TKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKEC 407
+NGI E+YK P++D+VP DPSF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKEC
Sbjct: 249 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 308
Query: 408 WHQNANVRLSALRVKKTLIKL 428
W+QN + RL+ALR+KKTL K+
Sbjct: 309 WYQNPSARLTALRIKKTLTKI 329
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 207/299 (69%), Positives = 253/299 (84%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+QRT+A QI+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct: 2 MQRTVAHQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 61
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
ENILG+I SDMTSR+S TQLWL+THYH GSLYD+L TTL+ ++I LSI +GL HL
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+ NPRVGTK
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR +NGI E+YK P++D+VP DP
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 206/299 (68%), Positives = 253/299 (84%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+QRT+A+ I+L EC+GKGRYGEVWRG W GENVAVKIF SRDE SW RETE+Y+TV+LRH
Sbjct: 2 MQRTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH 61
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
ENILG+I SDMTSR+S TQLWL+THYH GSLYD+L TTL+ ++I LSI +GL HL
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H EIFGTQGKPAIAHRD+KSKNILVK NG C IAD GLAV +SQ +N++D+ NPRVGTK
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
RYM+PE+LDE+I +DCF+S+K+ DI+A GLVLWEV RR +NGI E+YK P++D+VP DP
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
SF+DMRKV+C+DQQRP +PNRW SD TL ++ K+MKECW+QN + RL+ALR+KKTL K+
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 196/300 (65%), Positives = 245/300 (81%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+QRT+A+Q++L EC+GKGRYGEVWRG+WHGE+VAVKIF SRDE SW RETEIY+TVLLRH
Sbjct: 2 MQRTVARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRH 61
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
+NILG+I SDMTSRNS TQLWL+THYH GSLYD L R TL H +++ +S GL HL
Sbjct: 62 DNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H EIFGTQGKPAIAHRD KS+N+LVK+N C IAD GLAV +SQ S+ +DI NPRVGTK
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
RYM+PE+LDE I DCFES+K DI+A GLVLWE+ RRT NGI E+Y+ P++D+VP DP
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDP 241
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
SF+DM+KV+C+DQQ P +PNR +D L+ + ++M+ECW+ N + RL+ALR+KKTL K++
Sbjct: 242 SFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKIS 301
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/300 (63%), Positives = 233/300 (77%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+QRT+AKQI + + IGKGRYGEVW G W GE VAVK+FF+ +EASW RETEIY TVL+RH
Sbjct: 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRH 90
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
ENILG+I +D+ S TQL+L+T YH GSLYD+L TTL+ M+K+ S V+GL HL
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHL 150
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
HTEIF TQGKPAIAHRD+KSKNILVK NGTC IAD GLAV + +N++DIPPN RVGTK
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK 210
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
RYM PE+LDES+N + F+S+ AD+Y+ GL+LWEV RR + GI EEY+ PYHDLVP DP
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP 270
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
S++DMR+++CI + RP PNRW SD L M K+M ECW N RL+ALRVKKTL K++
Sbjct: 271 SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/300 (62%), Positives = 229/300 (76%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+QRT+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRH
Sbjct: 23 VQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH 82
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
ENILG+I +D + TQLWLV+ YH GSL+D+LNR T+ M+K+ LS +GL HL
Sbjct: 83 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 142
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H EI GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV + ++ +DI PN RVGTK
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 202
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
RYM+PE+LD+SINM FESFK+ADIYA+GLV WE+ RR GI E+Y+ PY+DLVP DP
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 262
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
S ++MRKV+C + RP +PNRW S L M K+M+ECW+ N RL+ALR+KKTL +L+
Sbjct: 263 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 322
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 187/300 (62%), Positives = 229/300 (76%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+QRT+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRH
Sbjct: 36 VQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRH 95
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
ENILG+I +D + TQLWLV+ YH GSL+D+LNR T+ M+K+ LS +GL HL
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 155
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H EI GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV + ++ +DI PN RVGTK
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
RYM+PE+LD+SINM FESFK+ADIYA+GLV WE+ RR GI E+Y+ PY+DLVP DP
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 275
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
S ++MRKV+C + RP +PNRW S L M K+M+ECW+ N RL+ALR+KKTL +L+
Sbjct: 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/297 (62%), Positives = 226/297 (76%)
Query: 133 TLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
T+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENI
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 65
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
LG+I +D + TQLWLV+ YH GSL+D+LNR T+ M+K+ LS +GL HLH E
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV + ++ +DI PN RVGTKRYM
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
+PE+LD+SINM FESFK+ADIYA+GLV WE+ RR GI E+Y+ PY+DLVP DPS +
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 245
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
+MRKV+C + RP +PNRW S L M K+M+ECW+ N RL+ALR+KKTL +L+
Sbjct: 246 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 302
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 400 bits (1028), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/297 (62%), Positives = 226/297 (76%)
Query: 133 TLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
T+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENI
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 62
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
LG+I +D + TQLWLV+ YH GSL+D+LNR T+ M+K+ LS +GL HLH E
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV + ++ +DI PN RVGTKRYM
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
+PE+LD+SINM FESFK+ADIYA+GLV WE+ RR GI E+Y+ PY+DLVP DPS +
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 242
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
+MRKV+C + RP +PNRW S L M K+M+ECW+ N RL+ALR+KKTL +L+
Sbjct: 243 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 299
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 400 bits (1028), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/297 (62%), Positives = 226/297 (76%)
Query: 133 TLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
T+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENI
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 60
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
LG+I +D + TQLWLV+ YH GSL+D+LNR T+ M+K+ LS +GL HLH E
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV + ++ +DI PN RVGTKRYM
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
+PE+LD+SINM FESFK+ADIYA+GLV WE+ RR GI E+Y+ PY+DLVP DPS +
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 240
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
+MRKV+C + RP +PNRW S L M K+M+ECW+ N RL+ALR+KKTL +L+
Sbjct: 241 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 297
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 184/296 (62%), Positives = 225/296 (76%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL 193
+A+ I L E IGKGR+GEVWRG W GE VAVKIF SR+E SW RE EIY TV+LRHENIL
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL 60
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
G+I +D + TQLWLV+ YH GSL+D+LNR T+ M+K+ LS +GL HLH EI
Sbjct: 61 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
GTQGKPAIAHRD+KSKNILVK NGTC IAD GLAV + ++ +DI PN RVGTKRYM+
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
PE+LD+SINM FESFK+ADIYA+GLV WE+ RR GI E+Y+ PY+DLVP DPS ++
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240
Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLA 429
MRKV+C + RP +PNRW S L M K+M+ECW+ N RL+ALR+KKTL +L+
Sbjct: 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 178/284 (62%), Gaps = 6/284 (2%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
+ L E +GR+G VW+ E VAVKIF +D+ SW E E+YS ++HENIL +IG
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
++ + LWL+T +H GSL D L ++ +++ I ++ GL +LH +I G +
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 258 G--KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
KPAI+HRDIKSKN+L+K N T IADFGLA+ + + D + +VGT+RYM+PE
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT--HGQVGTRRYMAPE 203
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRR-TKANGIFEEYKAPYHDLVPMDPSFDDM 374
+L+ +IN ++F + D+YA+GLVLWE+ R T A+G +EY P+ + + PS +DM
Sbjct: 204 VLEGAINFQ-RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM 262
Query: 375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
++V+ ++RPVL + W + + + + ++ECW +A RLSA
Sbjct: 263 QEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 176/285 (61%), Gaps = 7/285 (2%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
+ L E +GR+G VW+ + VAVKIF +D+ SW E EI+ST ++HEN+L +I
Sbjct: 17 LQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
++ N +LWL+T +H GSL D+L + +++ + ++ GL +LH ++ +
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 258 G---KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
G KP+IAHRD KSKN+L+K++ T V+ADFGLAV + D + +VGT+RYM+P
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDT--HGQVGTRRYMAP 194
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTK-ANGIFEEYKAPYHDLVPMDPSFDD 373
E+L+ +IN ++F + D+YA+GLVLWE+ R K A+G +EY P+ + + PS ++
Sbjct: 195 EVLEGAINFQ-RDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEE 253
Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
+++V+ + RP + + W+ L + ++ECW +A RLSA
Sbjct: 254 LQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSA 298
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 174/304 (57%), Gaps = 15/304 (4%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI- 196
+ L E IG+GRYG V++G VAVK+F + ++ E IY L+ H+NI +I
Sbjct: 15 LKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI-FG 255
G + + + + LV Y+ GSL +L+ T + ++ S+ GL +LHTE+ G
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP------RVGTK 309
KPAI+HRD+ S+N+LVK +GTCVI+DFGL++ + N++ P VGT
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT--GNRLVRPGEEDNAAISEVGTI 192
Query: 310 RYMSPEILDESINMDCFES-FKKADIYALGLVLWEV---CRRTKANGIFEEYKAPYHDLV 365
RYM+PE+L+ ++N+ ES K+ D+YALGL+ WE+ C EY+ + V
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV 252
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDS-TLNAMTKVMKECWHQNANVRLSALRVKKT 424
P+F+DM+ ++ ++QRP P W +S + ++ + +++CW Q+A RL+A ++
Sbjct: 253 GNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312
Query: 425 LIKL 428
+ +L
Sbjct: 313 MAEL 316
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 109/217 (50%), Gaps = 31/217 (14%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENIL 193
+++ E IG G +G V R WHG +VAVKI +D + R E V LRH NI+
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIV 97
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHL 249
++G+ N L +VT Y S GSLY L+ R L+ + + + + G+ +L
Sbjct: 98 LFMGAVTQPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H P I HRD+KS N+LV T + DFGL S+L + GT
Sbjct: 154 HNR------NPPIVHRDLKSPNLLVDKKYTVKVCDFGL----SRLKASXFLXSKXAAGTP 203
Query: 310 RYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
+M+PE+L DE N +K+D+Y+ G++LWE+
Sbjct: 204 EWMAPEVLRDEPSN-------EKSDVYSFGVILWELA 233
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 109/217 (50%), Gaps = 31/217 (14%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENIL 193
+++ E IG G +G V R WHG +VAVKI +D + R E V LRH NI+
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHA-ERVNEFLREVAIMKRLRHPNIV 97
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHL 249
++G+ N L +VT Y S GSLY L+ R L+ + + + + G+ +L
Sbjct: 98 LFMGAVTQPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H P I HR++KS N+LV T + DFGL S+L + GT
Sbjct: 154 HNR------NPPIVHRNLKSPNLLVDKKYTVKVCDFGL----SRLKASTFLSSKSAAGTP 203
Query: 310 RYMSPEIL-DESINMDCFESFKKADIYALGLVLWEVC 345
+M+PE+L DE N +K+D+Y+ G++LWE+
Sbjct: 204 EWMAPEVLRDEPSN-------EKSDVYSFGVILWELA 233
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 48/303 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
K++ L + IGKG +G+V G + G VAVK D + + E LRH N++
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+G + + L++VT Y + GSL D+L R+ L ++K L + + +L
Sbjct: 71 LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
F HRD+ ++N+LV + ++DFGL S + +P ++
Sbjct: 128 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-------VKWT 172
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
+PE L E+ F + K+D+++ G++LWE+ + G + P D+VP
Sbjct: 173 APEALREA----AFST--KSDVWSFGILLWEIY----SFGRVPYPRIPLKDVVPR----- 217
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
+ K +D D A+ +VMK CWH +A +R S L++++ L + +
Sbjct: 218 -VEKGYKMD----------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 266
Query: 433 MYI 435
+++
Sbjct: 267 LHL 269
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 48/303 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
K++ L + IGKG +G+V G + G VAVK D + + E LRH N++
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+G + + L++VT Y + GSL D+L R+ L ++K L + + +L
Sbjct: 65 LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
F HRD+ ++N+LV + ++DFGL S + +P ++
Sbjct: 122 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-------KWT 166
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
+PE L E + K+D+++ G++LWE+ + G + P D+VP
Sbjct: 167 APEALREK------KFSTKSDVWSFGILLWEIY----SFGRVPYPRIPLKDVVPR----- 211
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
+ K +D D A+ +VMK CWH +A +R S L++++ L + +
Sbjct: 212 -VEKGYKMD----------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 260
Query: 433 MYI 435
+++
Sbjct: 261 LHL 263
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 48/303 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
K++ L + IGKG +G+V G + G VAVK D + + E LRH N++
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+G + + L++VT Y + GSL D+L R+ L ++K L + + +L
Sbjct: 80 LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
F HRD+ ++N+LV + ++DFGL S + +P ++
Sbjct: 137 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-------KWT 181
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
+PE L E + K+D+++ G++LWE+ + G + P D+VP
Sbjct: 182 APEALREK------KFSTKSDVWSFGILLWEIY----SFGRVPYPRIPLKDVVPR----- 226
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
+ K +D D A+ +VMK CWH +A +R S L++++ L + +
Sbjct: 227 -VEKGYKMD----------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275
Query: 433 MYI 435
+++
Sbjct: 276 LHL 278
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 48/303 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
K++ L + IGKG +G+V G + G VAVK D + + E LRH N++
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+G + + L++VT Y + GSL D+L R+ L ++K L + + +L
Sbjct: 252 LGVIVEEKGG---LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
F HRD+ ++N+LV + ++DFGL S + +P ++
Sbjct: 309 NF--------VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-------VKWT 353
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
+PE L E + K+D+++ G++LWE+ + G + P D+VP
Sbjct: 354 APEALREK------KFSTKSDVWSFGILLWEIY----SFGRVPYPRIPLKDVVPR----- 398
Query: 373 DMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACAD 432
+ K +D D A+ VMK CWH +A R + L++++ L + +
Sbjct: 399 -VEKGYKMD----------APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
Query: 433 MYI 435
+++
Sbjct: 448 LHL 450
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 107/216 (49%), Gaps = 26/216 (12%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD---EASWSRETEIYSTVLLRHEN 191
A ++ LS IG G +G V++G WHG+ VAVKI D E + E+ RH N
Sbjct: 35 ASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVN 93
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
IL ++G MT N L +VT + SLY HL+ T Q++ I G+ +L
Sbjct: 94 ILLFMGY-MTKDN----LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H + I HRD+KS NI + T I DFGLA S+ S + G+
Sbjct: 149 HAK--------NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV--EQPTGSV 198
Query: 310 RYMSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
+M+PE++ + N F+S D+Y+ G+VL+E+
Sbjct: 199 LWMAPEVIRMQDNNPFSFQS----DVYSYGIVLYEL 230
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG +VAVK+ + + + E+ RH NIL
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL + T +++ I G+ +LH
Sbjct: 84 LFMGY-----STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 139 K--------SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 188
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 189 MAPEVIRMQDSNPYSFQS----DVYAFGIVLYEL 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 117/230 (50%), Gaps = 36/230 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
E IGKG +GEV++G+ + VA+KI + + + TVL + ++ + Y G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
S + T+LW++ Y GS D L L+ Q+ I I+ GL +LH+E
Sbjct: 93 SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
HRDIK+ N+L+ +G +ADFG+A QL++ I N VGT +M+PE++
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVI 196
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
+S ++S KADI++LG+ E+ R + P+ +L PM
Sbjct: 197 KQS----AYDS--KADIWSLGITAIELARG----------EPPHSELHPM 230
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL + T +++ I G+ +LH
Sbjct: 84 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 139 K--------SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 188
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 189 MAPEVIRMQDSNPYSFQS----DVYAFGIVLYEL 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 117/230 (50%), Gaps = 36/230 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
E IGKG +GEV++G+ + VA+KI + + + TVL + ++ + Y G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
S + T+LW++ Y GS D L L+ Q+ I I+ GL +LH+E
Sbjct: 88 SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 138
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
HRDIK+ N+L+ +G +ADFG+A QL++ I N VGT +M+PE++
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVI 191
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
+S ++S KADI++LG+ E+ R + P+ +L PM
Sbjct: 192 KQS----AYDS--KADIWSLGITAIELARG----------EPPHSELHPM 225
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 36/234 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
E IGKG +GEV++G+ + VA+KI + + + TVL + ++ + Y G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
S + T+LW++ Y GS D L L+ Q+ I I+ GL +LH+E
Sbjct: 73 SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 123
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
HRDIK+ N+L+ +G +ADFG+A QL++ I N VGT +M+PE++
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVI 176
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
+S ++S KADI++LG+ E+ R + P+ +L PM F
Sbjct: 177 KQS----AYDS--KADIWSLGITAIELARG----------EPPHSELHPMKVLF 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 36/234 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
E IGKG +GEV++G+ + VA+KI + + + TVL + ++ + Y G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
S + T+LW++ Y GS D L L+ Q+ I I+ GL +LH+E
Sbjct: 73 SYLKD----TKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE----- 123
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
HRDIK+ N+L+ +G +ADFG+A QL++ I N VGT +M+PE++
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVI 176
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
+S ++S KADI++LG+ E+ R + P+ +L PM F
Sbjct: 177 KQS----AYDS--KADIWSLGITAIELARG----------EPPHSELHPMKVLF 214
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL + T +++ I G+ +LH
Sbjct: 72 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 127 K--------SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 176
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 177 MAPEVIRMQDSNPYSFQS----DVYAFGIVLYEL 206
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 39/252 (15%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
R A L E +G G YG+V++G V G+ A+K+ + + E EI + +
Sbjct: 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM----DVTGDEEEEIKQEINMLK 75
Query: 188 ---RHENILGYIGSDMTSRNSC--TQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKIC 239
H NI Y G+ + QLWLV + GS+ D + T TL + IC
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
I+ GL HLH + HRDIK +N+L+ N + DFG++ + +
Sbjct: 136 REILRGLSHLHQH--------KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR- 186
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
N +GT +M+PE++ N D F K+D+++LG+ E+ E
Sbjct: 187 ---NTFIGTPYWMAPEVIACDENPDATYDF-KSDLWSLGITAIEMA----------EGAP 232
Query: 360 PYHDLVPMDPSF 371
P D+ PM F
Sbjct: 233 PLCDMHPMRALF 244
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 68 LFMGY-----STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 123 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 172
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 173 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 202
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 68 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 123 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 172
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 173 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 202
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 29 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 88 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 143 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 192
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 193 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 222
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 96 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 151 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF--EQLSGSILW 200
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 201 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 230
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 73 LFMG-----YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 128 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 177
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 178 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 207
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 68 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 123 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 172
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 173 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 202
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 70 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 125 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 174
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 175 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 204
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 36 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 95 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 150 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 199
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 200 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 229
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 37 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 96 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 151 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 200
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 201 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 230
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF---FSRDEASWSRETEIYSTVLLRHENIL 193
QI++ + IG G +G V++G WHG+ VAVK+ + + + E+ RH NIL
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHLHT 251
++G ++ QL +VT + SLY HL+ T +++ I G+ +LH
Sbjct: 73 LFMGY-----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +I HRD+KS NI + + T I DFGLA S+ S G+ +
Sbjct: 128 K--------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILW 177
Query: 312 MSPEILD-ESINMDCFESFKKADIYALGLVLWEV 344
M+PE++ + N F+S D+YA G+VL+E+
Sbjct: 178 MAPEVIRMQDKNPYSFQS----DVYAFGIVLYEL 207
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 54/288 (18%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
E +G+G YG V++ + G+ VA+K + D +E I H ++ Y GS
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPH--VVKYYGS 92
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD--HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
+ T LW+V Y GS+ D L TL ++ I S + GL +LH F
Sbjct: 93 YFKN----TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMR 145
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
+ HRDIK+ NIL+ T G +ADFG+A QL++ M N +GT +M+PE+
Sbjct: 146 K-----IHRDIKAGNILLNTEGHAKLADFGVA---GQLTDXM-AKRNXVIGTPFWMAPEV 196
Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK 376
+ E I +C ADI++LG+ E+ E K PY D+ P MR
Sbjct: 197 IQE-IGYNCV-----ADIWSLGITAIEMA----------EGKPPYADIHP-------MRA 233
Query: 377 VICIDQQRPVL---PNRWVSDSTLNAMTKVMKECWHQNANVRLSALRV 421
+ I P P W SD+ T +K+C ++ R +A ++
Sbjct: 234 IFMIPTNPPPTFRKPELW-SDN----FTDFVKQCLVKSPEQRATATQL 276
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 25/222 (11%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHEN 191
+Q+ + E IGKGR+G+V+ G WHGE I RD ++ RE Y RHEN
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT--RHEN 90
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
++ ++G+ M S L ++T +LY + + L+ ++ +I IV G+ +L
Sbjct: 91 VVLFMGACM----SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-AVSYSQLSNKMDIPPNPRVGT 308
H + I H+D+KSKN+ NG VI DFGL ++S + + + + G
Sbjct: 147 HAK--------GILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGW 197
Query: 309 KRYMSPEI---LDESINMDCFESFKKADIYALGLVLWEVCRR 347
+++PEI L D K +D++ALG + +E+ R
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
E IGKG +GEV++G+ + + VA+KI + + + TVL + ++ Y+
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS--SYVTKY 86
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGK 259
S ++LW++ Y GS D L + Q+ + I+ GL +LH+E
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE------- 139
Query: 260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDE 319
HRDIK+ N+L+ G +ADFG+A QL++ I N VGT +M+PE++ +
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTD-TQIKRNTFVGTPFWMAPEVIQQ 194
Query: 320 SINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
S ++S KADI++LG+ E+ + N
Sbjct: 195 S----AYDS--KADIWSLGITAIELAKGEPPN 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIGSD 199
IGKG +GEV++G+ + E VA+KI + + + TVL + ++ I Y GS
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGK 259
+ S T+LW++ Y GS D L L + I I+ GL +LH+E
Sbjct: 87 LKS----TKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE------- 135
Query: 260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDE 319
HRDIK+ N+L+ G +ADFG+A QL++ I N VGT +M+PE++ +
Sbjct: 136 -RKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTD-TQIKRNXFVGTPFWMAPEVIKQ 190
Query: 320 SINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
S F KADI++LG+ E+ + N
Sbjct: 191 SAY-----DF-KADIWSLGITAIELAKGEPPN 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
K+I + E +G+G +G V + W ++VA+K S E + E+ + H NI+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIVKL 67
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT----LNHHQMMKICLSIVNGLVHLHT 251
G+ + + LV Y GSLY+ L+ M CL G+ +LH+
Sbjct: 68 YGACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLA--VSYSQLSNKMDIPPNPRVGT 308
Q K A+ HRD+K N+L+ GT + I DFG A + +NK G+
Sbjct: 122 ----MQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---------GS 167
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
+M+PE+ + S +K D+++ G++LWEV R K F+E P + M
Sbjct: 168 AAWMAPEVFEGS------NYSEKCDVFSWGIILWEVITRRKP---FDEIGGPAFRI--MW 216
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
+ R + + +P+ +M CW ++ + R S + K + L
Sbjct: 217 AVHNGTRPPLIKNLPKPI--------------ESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 53/300 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
K+I + E +G+G +G V + W ++VA+K S E + E+ + H NI+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIVKL 66
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT----LNHHQMMKICLSIVNGLVHLHT 251
G+ + + LV Y GSLY+ L+ M CL G+ +LH+
Sbjct: 67 YGACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLA--VSYSQLSNKMDIPPNPRVGT 308
Q K A+ HRD+K N+L+ GT + I DFG A + +NK G+
Sbjct: 121 ----MQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---------GS 166
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
+M+PE+ + S +K D+++ G++LWEV R K F+E P + M
Sbjct: 167 AAWMAPEVFEGS------NYSEKCDVFSWGIILWEVITRRKP---FDEIGGPAFRI--MW 215
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
+ R + + +P+ +M CW ++ + R S + K + L
Sbjct: 216 AVHNGTRPPLIKNLPKPI--------------ESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 39/298 (13%)
Query: 144 IGKGRYGEVWRGVWHGENVAVK-----IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
+G+G +G V++G + VAVK + + +E + EI +HEN++ +G
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIF 254
+ C LV Y GSL D L+ L+ H KI NG+ LH
Sbjct: 99 SSDGDDLC----LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
HRDIKS NIL+ T I+DFGLA + + + + + VGT YM+P
Sbjct: 155 --------IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT--VMXSRIVGTTAYMAP 204
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
E L I K+DIY+ G+VL E+ A +E++ P L+ +
Sbjct: 205 EALRGEIT-------PKSDIYSFGVVLLEIITGLPA---VDEHREP--QLLLDIKEEIED 252
Query: 375 RKVICIDQQRPVLPNRWVSDST-LNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
+ D + + +DST + AM V +C H+ N R +V++ L ++ +
Sbjct: 253 EEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 144 IGKGRYGEVWRGVWHGENVAVK-----IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
+G+G +G V++G + VAVK + + +E + EI +HEN++ +G
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 92
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIF 254
+ C LV Y GSL D L+ L+ H KI NG+ LH
Sbjct: 93 SSDGDDLC----LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
HRDIKS NIL+ T I+DFGLA + + + + VGT YM+P
Sbjct: 149 --------IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX--VMXXRIVGTTAYMAP 198
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
E L I K+DIY+ G+VL E+ A +E++ P L+ +
Sbjct: 199 EALRGEIT-------PKSDIYSFGVVLLEIITGLPA---VDEHREP--QLLLDIKEEIED 246
Query: 375 RKVICIDQQRPVLPNRWVSDST-LNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
+ D + + +DST + AM V +C H+ N R +V++ L ++ +
Sbjct: 247 EEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 39/298 (13%)
Query: 144 IGKGRYGEVWRGVWHGENVAVK-----IFFSRDEASWSRETEIYSTVLLRHENILGYIGS 198
+G+G +G V++G + VAVK + + +E + EI +HEN++ +G
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIF 254
+ C LV Y GSL D L+ L+ H KI NG+ LH
Sbjct: 99 SSDGDDLC----LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
HRDIKS NIL+ T I+DFGLA + + + + VGT YM+P
Sbjct: 155 --------IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT--VMXXRIVGTTAYMAP 204
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
E L I K+DIY+ G+VL E+ A +E++ P L+ +
Sbjct: 205 EALRGEIT-------PKSDIYSFGVVLLEIITGLPA---VDEHREP--QLLLDIKEEIED 252
Query: 375 RKVICIDQQRPVLPNRWVSDST-LNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
+ D + + +DST + AM V +C H+ N R +V++ L ++ +
Sbjct: 253 EEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHGENVAVKIF-------FSRDEASWSRETEIYSTVLLRH 189
+++L E IG G +G+V+R W G+ VAVK S+ + +E ++++ +L+H
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA--MLKH 65
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
NI+ G + N C LV + G L L+ + ++ + I G+ +L
Sbjct: 66 PNIIALRGVCLKEPNLC----LVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILV--------KTNGTCVIADFGLAVSYSQLSNKMDIP 301
H E I HRD+KS NIL+ +N I DFGLA + + + KM
Sbjct: 122 HDEAI-----VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMS-- 173
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
G +M+PE++ S+ K +D+++ G++LWE+ + P+
Sbjct: 174 ---AAGAYAWMAPEVIRASM------FSKGSDVWSYGVLLWELLTG----------EVPF 214
Query: 362 HDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
+ D + + + LP + + K+M++CW+ + + R S
Sbjct: 215 RGI-------DGLAVAYGVAMNKLALP---IPSTCPEPFAKLMEDCWNPDPHSRPS 260
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 144 IGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
IG+G G V R G VAVK+ R + RE V++R H N++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR--RELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
+ +LW++ + G+L D +++ LN Q+ +C +++ L +LH +
Sbjct: 111 YLVGE----ELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ------ 160
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
+ HRDIKS +IL+ +G ++DFG S+ D+P VGT +M+PE++
Sbjct: 161 --GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-----DVPKRKXLVGTPYWMAPEVI 213
Query: 318 DESINMDCFESFKKADIYALGLVLWEVC 345
S+ + DI++LG+++ E+
Sbjct: 214 SRSLYA------TEVDIWSLGIMVIEMV 235
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 33/225 (14%)
Query: 145 GKGRYGEVWRGVWHGENVAVK-----IFFSRDEASWSRETEIYSTVLLRHENILGYIGSD 199
G+G +G V++G + VAVK + + +E + EI +HEN++ +G
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLN----RTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+ C LV Y GSL D L+ L+ H KI NG+ LH
Sbjct: 91 SDGDDLC----LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH- 145
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
HRDIKS NIL+ T I+DFGLA + + + + + VGT Y +PE
Sbjct: 146 -------IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX--VXXSRIVGTTAYXAPE 196
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAP 360
L I K+DIY+ G+VL E+ A +E++ P
Sbjct: 197 ALRGEIT-------PKSDIYSFGVVLLEIITGLPA---VDEHREP 231
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 45/240 (18%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
IG+G G V G+ VAVK R + RE V++R H+N++ S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--RELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
+ +LW+V + G+L D + T +N Q+ +CLS++ L +LH +
Sbjct: 111 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ------ 160
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
+ HRDIKS +IL+ ++G ++DFG S+ ++P VGT +M+PE++
Sbjct: 161 --GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-----EVPKRKXLVGTPYWMAPEVI 213
Query: 318 DESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKV 377
+ DI++LG+++ E+ + + PY + +P MR++
Sbjct: 214 SR------LPYGTEVDIWSLGIMVIEMI----------DGEPPYFN----EPPLQAMRRI 253
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 130/289 (44%), Gaps = 52/289 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWS-RETEIYSTV-----LLRH 189
KQ++ + + GE+W+G W G ++ VK+ RD WS R++ ++ + H
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRD---WSTRKSRDFNEECPRLRIFSH 66
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGL 246
N+L +G+ + L+TH+ +GSLY+ L+ T ++ Q +K L + G+
Sbjct: 67 PNVLPVLGACQSP--PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
LHT +P I + S+++++ + T I+ + S+ Q +M P
Sbjct: 125 AFLHTL------EPLIPRHALNSRSVMIDEDMTARISMADVKFSF-QSPGRMYAP----- 172
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
+++PE L + + + AD+++ ++LWE+ R + P+ DL
Sbjct: 173 ---AWVAPEALQKKPE---DTNRRSADMWSFAVLLWELVTR----------EVPFADLSN 216
Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
M+ + ++ RP +P ++K+MK C +++ R
Sbjct: 217 MEIGMK-----VALEGLRPTIP-----PGISPHVSKLMKICMNEDPAKR 255
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
K+ + E IG+G G V+ V G+ VA++ + + +E I +++R
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 77
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
NI+ Y+ S + +LW+V Y + GSL D + T ++ Q+ +C + L LH
Sbjct: 78 NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ + HRDIKS NIL+ +G+ + DFG + +K + VGT
Sbjct: 134 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----SEMVGTPY 181
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+M+PE++ K DI++LG++ E+
Sbjct: 182 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
K+ + E IG+G G V+ V G+ VA++ + + +E I +++R
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 77
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
NI+ Y+ S + +LW+V Y + GSL D + T ++ Q+ +C + L LH
Sbjct: 78 NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ + HRDIKS NIL+ +G+ + DFG + +K + VGT
Sbjct: 134 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPY 181
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+M+PE++ K DI++LG++ E+
Sbjct: 182 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 209
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
K+ + E IG+G G V+ V G+ VA++ + + +E I +++R
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 77
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
NI+ Y+ S + +LW+V Y + GSL D + T ++ Q+ +C + L LH
Sbjct: 78 NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ + HRDIKS NIL+ +G+ + DFG + +K + VGT
Sbjct: 134 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----SXMVGTPY 181
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+M+PE++ K DI++LG++ E+
Sbjct: 182 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 209
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
K+ + E IG+G G V+ V G+ VA++ + + +E I +++R
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 78
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
NI+ Y+ S + +LW+V Y + GSL D + T ++ Q+ +C + L LH
Sbjct: 79 NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ + HRDIKS NIL+ +G+ + DFG + +K + VGT
Sbjct: 135 SN--------QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----SXMVGTPY 182
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+M+PE++ K DI++LG++ E+
Sbjct: 183 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 98
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 99 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 157 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 207
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 208 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 254
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 255 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 312
Query: 418 -ALRVKKTLIKLA 429
ALRV + ++A
Sbjct: 313 LALRVDQIRDQMA 325
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 65
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 66 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 124 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 174
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 175 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 221
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 222 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 279
Query: 418 -ALRVKKTLIKLA 429
ALRV + ++A
Sbjct: 280 LALRVDQIRDQMA 292
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 16 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 76 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL S + P + K
Sbjct: 129 EKKNF--------IHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAPAGAKFPIK 178
Query: 310 RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
+ +PE L + F K+D++A G++LWE+
Sbjct: 179 -WTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 77 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL S + P + K
Sbjct: 130 EKKNF--------IHRDLAARNCLVGENHLVKVADFGL--SRLMTGDTYTAPAGAKFPIK 179
Query: 310 RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
+ +PE L + F K+D++A G++LWE+
Sbjct: 180 -WTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 14 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 71
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 72 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 130 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 180
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 181 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 227
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 228 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 285
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 286 LALRVDQIRDNMA 298
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 68 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 126 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 176
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 177 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 223
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 224 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 282 LALRVDQIRDNMA 294
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 16 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 73
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 74 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 132 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 182
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 183 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 229
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 230 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 287
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 288 LALRVDQIRDNMA 300
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 15 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 72
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 73 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 131 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 181
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 182 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 228
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 229 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 286
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 287 LALRVDQIRDNMA 299
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 17 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 74
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 75 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 133 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 183
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 184 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 230
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 231 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 288
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 289 LALRVDQIRDNMA 301
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 85
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 86 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 144 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 194
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 195 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELFT------YIEKSKSPPAE 241
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 242 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 299
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 300 LALRVDQIRDNMA 312
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 9 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 66
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 67 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 125 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 175
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 176 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 222
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 223 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 280
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 281 LALRVDQIRDNMA 293
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 68 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 126 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 176
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 177 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 223
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 224 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 282 LALRVDQIRDNMA 294
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 70
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 71 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 129 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 179
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 180 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 226
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 227 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 284
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 285 LALRVDQIRDNMA 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 68 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 126 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV-KEP 176
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 177 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 223
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 224 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 282 LALRVDQIRDNMA 294
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
IG+G G V G+ VAVK R + RE V++R HEN++ S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 94
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
+ +LW+V + G+L D + T +N Q+ +CL+++ L LH +
Sbjct: 95 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 144
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSP 314
+ HRDIKS +IL+ +G ++DFG +Q+S ++ PR VGT +M+P
Sbjct: 145 --GVIHRDIKSDSILLTHDGRVKLSDFGFC---AQVSKEV-----PRRKXLVGTPYWMAP 194
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVC 345
E++ + DI++LG+++ E+
Sbjct: 195 ELISR------LPYGPEVDIWSLGIMVIEMV 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 47/307 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 85
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 86 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 144 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 194
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 195 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 241
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 242 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 299
Query: 418 -ALRVKK 423
ALRV +
Sbjct: 300 LALRVDQ 306
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 66/294 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
K ++ + +G G++G V G W G+ +VA+K+ E S S + I + L HE
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
++ G R ++++T Y + G L ++L R Q++++C + + +L
Sbjct: 81 LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
++ F HRD+ ++N LV G ++DFGL+ +D VG+K
Sbjct: 137 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEETSSVGSK 182
Query: 310 ---RYMSPEILDESINMDCFESF-KKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
R+ PE+L + F K+DI+A G+++WE I+ K PY
Sbjct: 183 FPVRWSPPEVL-------MYSKFSSKSDIWAFGVLMWE---------IYSLGKMPYE--- 223
Query: 366 PMDPSFDDMRKVICIDQQ----RPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
F + I Q RP L + V +M CWH+ A+ R
Sbjct: 224 ----RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 265
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
IG+G G V G+ VAVK R + RE V++R HEN++ S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 96
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
+ +LW+V + G+L D + T +N Q+ +CL+++ L LH +
Sbjct: 97 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 146
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSP 314
+ HRDIKS +IL+ +G ++DFG +Q+S ++ PR VGT +M+P
Sbjct: 147 --GVIHRDIKSDSILLTHDGRVKLSDFGFC---AQVSKEV-----PRRKXLVGTPYWMAP 196
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVC 345
E++ + DI++LG+++ E+
Sbjct: 197 ELISR------LPYGPEVDIWSLGIMVIEMV 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
IG+G G V G+ VAVK R + RE V++R HEN++ S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 85
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
+ +LW+V + G+L D + T +N Q+ +CL+++ L LH +
Sbjct: 86 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 135
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
+ HRDIKS +IL+ +G ++DFG S+ ++P VGT +M+PE++
Sbjct: 136 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-----EVPRRKXLVGTPYWMAPELI 188
Query: 318 DESINMDCFESFKKADIYALGLVLWEVC 345
+ DI++LG+++ E+
Sbjct: 189 SR------LPYGPEVDIWSLGIMVIEMV 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 29/214 (13%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE--- 190
K+ + E IG+G G V+ V G+ VA++ + + +E I +++R
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNP 78
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
NI+ Y+ S + +LW+V Y + GSL D + T ++ Q+ +C + L LH
Sbjct: 79 NIVNYLDSYLVG----DELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ + HR+IKS NIL+ +G+ + DFG + +K + VGT
Sbjct: 135 SN--------QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR----STMVGTPY 182
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+M+PE++ K DI++LG++ E+
Sbjct: 183 WMAPEVVTRKA------YGPKVDIWSLGIMAIEM 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
IG+G G V G+ VAVK R + RE V++R HEN++ S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 89
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
+ +LW+V + G+L D + T +N Q+ +CL+++ L LH +
Sbjct: 90 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 139
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR-VGTKRYMSPEIL 317
+ HRDIKS +IL+ +G ++DFG S+ ++P VGT +M+PE++
Sbjct: 140 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-----EVPRRKXLVGTPYWMAPELI 192
Query: 318 DESINMDCFESFKKADIYALGLVLWEVC 345
+ DI++LG+++ E+
Sbjct: 193 SR------LPYGPEVDIWSLGIMVIEMV 214
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
IG+G G V G+ VAVK R + RE V++R HEN++ S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 216
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
+ +LW+V + G+L D + T +N Q+ +CL+++ L LH +
Sbjct: 217 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 266
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSP 314
+ HRDIKS +IL+ +G ++DFG +Q+S ++ PR VGT +M+P
Sbjct: 267 --GVIHRDIKSDSILLTHDGRVKLSDFGFC---AQVSKEV-----PRRKXLVGTPYWMAP 316
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVC 345
E++ + DI++LG+++ E+
Sbjct: 317 ELISR------LPYGPEVDIWSLGIMVIEMV 341
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 133/315 (42%), Gaps = 59/315 (18%)
Query: 132 RTLAKQISLS-----ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEI 181
R AK+I +S E IG G +GEV RG VA+K RE
Sbjct: 7 REFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 66
Query: 182 YSTVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMK 237
++++ H NI+ G S + ++T + G+L + LN Q++
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNS----MPVMILTEFMENGALDSFLRLNDGQFTVIQLVG 122
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK 297
+ I +G+ +L + + HRD+ ++NILV +N C ++DFGL+ + N
Sbjct: 123 MLRGIASGMRYL--------AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE--NS 172
Query: 298 MDIPPNPRVGTK---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGI 353
D +G K R+ +PE + F F A D ++ G+V+WEV
Sbjct: 173 SDPTETSSLGGKIPIRWTAPEAI-------AFRKFTSASDAWSYGIVMWEVMS------- 218
Query: 354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNAN 413
F E PY D+ S D+ I D + P P+ ++ ++M +CW ++ N
Sbjct: 219 FGER--PYWDM-----SNQDVINAIEQDYRLPPPPD------CPTSLHQLMLDCWQKDRN 265
Query: 414 VRLSALRVKKTLIKL 428
R +V L K+
Sbjct: 266 ARPRFPQVVSALDKM 280
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
IG+G G V G+ VAVK R + RE V++R HEN++ S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQHENVVEMYNS 139
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQG 258
+ +LW+V + G+L D + T +N Q+ +CL+++ L LH +
Sbjct: 140 YLVG----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ------ 189
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR----VGTKRYMSP 314
+ HRDIKS +IL+ +G ++DFG +Q+S ++ PR VGT +M+P
Sbjct: 190 --GVIHRDIKSDSILLTHDGRVKLSDFGFC---AQVSKEV-----PRRKXLVGTPYWMAP 239
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVC 345
E++ + DI++LG+++ E+
Sbjct: 240 ELISR------LPYGPEVDIWSLGIMVIEMV 264
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 137/313 (43%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 70
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L + ++H ++++ I
Sbjct: 71 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HRD+ ++NILV+ I DFGL Q + P
Sbjct: 129 GMEYLGTKRY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEP 179
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 180 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 226
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 227 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 284
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 285 LALRVDQIRDNMA 297
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
K ++ + +G G++G V G W G+ +VA+K+ E S S + I + L HE
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 80
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
++ G R ++++T Y + G L ++L R Q++++C + + +L
Sbjct: 81 LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 136
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
++ F HRD+ ++N LV G ++DFGL+ +D VG+K
Sbjct: 137 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 182
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
R+ PE+L S F S K+DI+A G+++WE I+ K PY
Sbjct: 183 FPVRWSPPEVLMYSK----FSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 223
Query: 367 MDPSFDDMRKVICIDQQ----RPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
F + I Q RP L + V +M CWH+ A+ R
Sbjct: 224 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
K ++ + +G G++G V G W G+ +VA+K+ E S S + I + L HE
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 60
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
++ G R ++++T Y + G L ++L R Q++++C + + +L
Sbjct: 61 LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 116
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
++ F HRD+ ++N LV G ++DFGL+ +D VG+K
Sbjct: 117 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 162
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
R+ PE+L S F S K+DI+A G+++WE I+ K PY
Sbjct: 163 FPVRWSPPEVLMYS----KFSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 203
Query: 367 MDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
F + I Q RP L + V +M CWH+ A+ R
Sbjct: 204 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 245
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
K ++ + +G G++G V G W G+ +VA+K+ E S S + I + L HE
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 64
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
++ G R ++++T Y + G L ++L R Q++++C + + +L
Sbjct: 65 LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 120
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
++ F HRD+ ++N LV G ++DFGL+ +D VG+K
Sbjct: 121 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 166
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
R+ PE+L S F S K+DI+A G+++WE I+ K PY
Sbjct: 167 FPVRWSPPEVLMYS----KFSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 207
Query: 367 MDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
F + I Q RP L + V +M CWH+ A+ R
Sbjct: 208 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 249
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
K ++ + +G G++G V G W G+ +VA+K+ E S S + I + L HE
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 71
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
++ G R ++++T Y + G L ++L R Q++++C + + +L
Sbjct: 72 LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
++ F HRD+ ++N LV G ++DFGL+ +D VG+K
Sbjct: 128 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 173
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
R+ PE+L S F S K+DI+A G+++WE I+ K PY
Sbjct: 174 FPVRWSPPEVLMYSK----FSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 214
Query: 367 MDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
F + I Q RP L + V +M CWH+ A+ R
Sbjct: 215 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 256
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 64/293 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
K ++ + +G G++G V G W G+ +VA+K+ E S S + I + L HE
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
++ G R ++++T Y + G L ++L R Q++++C + + +L
Sbjct: 66 LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
++ F HRD+ ++N LV G ++DFGL+ +D VG+K
Sbjct: 122 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSVGSK 167
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
R+ PE+L S F S K+DI+A G+++WE I+ K PY
Sbjct: 168 FPVRWSPPEVLMYS----KFSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 208
Query: 367 MDPSFDDMRKVICIDQ----QRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
F + I Q RP L + V +M CWH+ A+ R
Sbjct: 209 ---RFTNSETAEHIAQGLRLYRPHLASEKV--------YTIMYSCWHEKADER 250
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 53/283 (18%)
Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
+G G +G+V++ +V A K+ ++ E + E +I ++ H NI+ + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC--DHPNIVKLLDA 102
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
N LW++ + + G++ L R L Q+ +C ++ L +LH
Sbjct: 103 FYYENN----LWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K+ NIL +G +ADFG++ ++ + D +GT +M+PE
Sbjct: 155 -----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD----SFIGTPYWMAPE 205
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
++ + D + KAD+++LG+ L E+ E + P+H+L P MR
Sbjct: 206 VVMCETSKDRPYDY-KADVWSLGITLIEMA----------EIEPPHHELNP-------MR 247
Query: 376 KVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
++ I + P P+RW S+ +K+C +N + R
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDAR 285
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 53/283 (18%)
Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
+G G +G+V++ +V A K+ ++ E + E +I ++ H NI+ + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC--DHPNIVKLLDA 102
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
N LW++ + + G++ L R L Q+ +C ++ L +LH
Sbjct: 103 FYYENN----LWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K+ NIL +G +ADFG++ ++ + D +GT +M+PE
Sbjct: 155 -----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDX----FIGTPYWMAPE 205
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
++ + D + KAD+++LG+ L E+ E + P+H+L P MR
Sbjct: 206 VVMCETSKDRPYDY-KADVWSLGITLIEMA----------EIEPPHHELNP-------MR 247
Query: 376 KVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
++ I + P P+RW S+ +K+C +N + R
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDAR 285
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 53/283 (18%)
Query: 144 IGKGRYGEVWRGVWHGENV--AVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
+G G +G+V++ +V A K+ ++ E + E +I ++ H NI+ + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC--DHPNIVKLLDA 102
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
N LW++ + + G++ L R L Q+ +C ++ L +LH
Sbjct: 103 FYYENN----LWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN--- 154
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K+ NIL +G +ADFG++ ++ + D +GT +M+PE
Sbjct: 155 -----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD----SFIGTPYWMAPE 205
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
++ + D + KAD+++LG+ L E+ E + P+H+L P MR
Sbjct: 206 VVMCETSKDRPYDY-KADVWSLGITLIEMA----------EIEPPHHELNP-------MR 247
Query: 376 KVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
++ I + P P+RW S+ +K+C +N + R
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDAR 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKIF-----FSRDEASWSRETEIY 182
Q T A++ ++ +GKG +GEV + + AVK+ ++D ++ RE E+
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 183 STVLLRHENILGY--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKIC 239
L H NI+ I D +S ++V ++ G L+D + R + H +I
Sbjct: 76 KK--LDHPNIMKLFEILEDSSS------FYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSN 296
+ +G+ ++H K I HRD+K +NIL+++ I DFGL+ + Q +
Sbjct: 128 KQVFSGITYMH--------KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
D R+GT Y++PE+L + + C D+++ G++L+
Sbjct: 180 MKD-----RIGTAYYIAPEVLRGTYDEKC-------DVWSAGVILY 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 62/292 (21%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRE---TEIYSTVLLRHEN 191
++I+L + +G G++G V G W G+ +VAVK+ E S S + E + + L H
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI---KEGSMSEDEFFQEAQTMMKLSHPK 64
Query: 192 ILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGL 246
++ + G C++ +++VT Y S G L ++L L Q++++C + G+
Sbjct: 65 LVKFYGV-------CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGM 117
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
L + F HRD+ ++N LV + ++DFG+ +D V
Sbjct: 118 AFLESHQF--------IHRDLAARNCLVDRDLCVKVSDFGMT------RYVLDDQYVSSV 163
Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
GTK ++ +PE+ F+ K+D++A G+++WEV F K PY D
Sbjct: 164 GTKFPVKWSAPEVFH------YFKYSSKSDVWAFGILMWEV---------FSLGKMPY-D 207
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
L + + V+ + Q + SD+ + ++M CWH+ R
Sbjct: 208 L------YTNSEVVLKVSQGHRLYRPHLASDT----IYQIMYSCWHELPEKR 249
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 73
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 74 YGY----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IADFG +V ++ S + D+ GT Y+ P
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPP 175
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 176 EMIEGRMHDE------KVDLWSLGVLCYE 198
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 74
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 75 YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 128
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IADFG +V ++ S + D+ GT Y+ P
Sbjct: 129 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPP 176
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 177 EMIEGRMHDE------KVDLWSLGVLCYE 199
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 80 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 162 VAVKIFF----SRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHS 217
VA+K F ++E E E++++ L H+NI+ I D+ + C +LV Y
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI--DVDEEDDC--YYLVMEYIE 94
Query: 218 FGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT 276
+L +++ + L+ + I++G+ H H I HRDIK +NIL+ +
Sbjct: 95 GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH--------DMRIVHRDIKPQNILIDS 146
Query: 277 NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYA 336
N T I DFG+A + S+ S N +GT +Y SPE +C DIY+
Sbjct: 147 NKTLKIFDFGIAKALSETSLTQ---TNHVLGTVQYFSPEQAKGEATDEC------TDIYS 197
Query: 337 LGLVLWEV 344
+G+VL+E+
Sbjct: 198 IGIVLYEM 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 99
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
GY + T+++L+ Y G++Y L + + + + + N L + H+
Sbjct: 100 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ + HRDIK +N+L+ + G IADFG +V ++ S + D+ GT Y
Sbjct: 153 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDL-----CGTLDY 198
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
+ PE+++ ++ + K D+++LG++ +E
Sbjct: 199 LPPEMIEGRMHDE------KVDLWSLGVLCYE 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKIF-----FSRDEASWSRETEIY 182
Q T A++ ++ +GKG +GEV + + AVK+ ++D ++ RE E+
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 183 STVLLRHENILGY--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKIC 239
L H NI+ I D +S ++V ++ G L+D + R + H +I
Sbjct: 76 KK--LDHPNIMKLFEILEDSSS------FYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSN 296
+ +G+ ++H K I HRD+K +NIL+++ I DFGL+ + Q +
Sbjct: 128 KQVFSGITYMH--------KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
D R+GT Y++PE+L + + C D+++ G++L+
Sbjct: 180 MKD-----RIGTAYYIAPEVLRGTYDEKC-------DVWSAGVILY 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 66 RHPNILRLYGY----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + D+
Sbjct: 122 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKIF-----FSRDEASWSRETEIY 182
Q T A++ ++ +GKG +GEV + + AVK+ ++D ++ RE E+
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 183 STVLLRHENILGY--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKIC 239
L H NI+ I D +S ++V ++ G L+D + R + H +I
Sbjct: 76 KK--LDHPNIMKLFEILEDSSS------FYIVGELYTGGELFDEIIKRKRFSEHDAARII 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSN 296
+ +G+ ++H K I HRD+K +NIL+++ I DFGL+ + Q +
Sbjct: 128 KQVFSGITYMH--------KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
D R+GT Y++PE+L + + C D+++ G++L+
Sbjct: 180 MKD-----RIGTAYYIAPEVLRGTYDEKC-------DVWSAGVILY 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 78
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 79 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 132 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 177
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 178 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S GSL D L T L Q++ + I +G+ ++
Sbjct: 70 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 126 MNY--------VHRDLRAANILVGENLVCKVADFGLA 154
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 32/212 (15%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
IG G +G V+ R V + E VA+K + S + +I V LRH N + Y G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+ + WLV Y GS D L ++ L ++ + + GL +LH+
Sbjct: 122 CYLREHTA----WLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 173
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
+ HRD+K+ NIL+ G + DFG S + P N VGT +M+PE
Sbjct: 174 -----NMIHRDVKAGNILLSEPGLVKLGDFG--------SASIMAPANXFVGTPYWMAPE 220
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRR 347
++ + MD + K D+++LG+ E+ R
Sbjct: 221 VI---LAMDEGQYDGKVDVWSLGITCIELAER 249
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 78
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 79 YGY----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 132
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IADFG +V ++ S + D+ GT Y+ P
Sbjct: 133 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPP 180
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 181 EMIEGRMHDE------KVDLWSLGVLCYE 203
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 80 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 80 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 47/262 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWS-RETEIYSTV-----LLRH 189
KQ++ + + GE+W+G W G ++ VK+ RD WS R++ ++ + H
Sbjct: 10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRD---WSTRKSRDFNEECPRLRIFSH 66
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGL 246
N+L +G+ + L+TH+ +GSLY+ L+ T ++ Q +K L G
Sbjct: 67 PNVLPVLGACQSP--PAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
LHT +P I + S+++ + + T I+ + S+ R
Sbjct: 125 AFLHTL------EPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPG---------RX 169
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
+++PE L + + + AD ++ ++LWE+ R + P+ DL
Sbjct: 170 YAPAWVAPEALQKKPED---TNRRSADXWSFAVLLWELVTR----------EVPFADL-- 214
Query: 367 MDPSFDDMRKVICIDQQRPVLP 388
S ++ + ++ RP +P
Sbjct: 215 ---SNXEIGXKVALEGLRPTIP 233
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 77 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 130 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 175
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 176 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 32/212 (15%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
IG G +G V+ R V + E VA+K + S + +I V LRH N + Y G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+ + WLV Y GS D L ++ L ++ + + GL +LH+
Sbjct: 83 CYLREHTA----WLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
+ HRD+K+ NIL+ G + DFG S + P N VGT +M+PE
Sbjct: 135 -----NMIHRDVKAGNILLSEPGLVKLGDFG--------SASIMAPANXFVGTPYWMAPE 181
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRR 347
++ + MD + K D+++LG+ E+ R
Sbjct: 182 VI---LAMDEGQYDGKVDVWSLGITCIELAER 210
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVL 186
+ + + +GKG +G V + GE VAVK E + RE EI +
Sbjct: 11 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS-- 68
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVN 244
L+H+NI+ Y G ++ L L+ Y +GSL D+L ++ ++H ++++ I
Sbjct: 69 LQHDNIVKYKGVCYSA--GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L T+ + HR++ ++NILV+ I DFGL Q + P
Sbjct: 127 GMEYLGTKRY--------IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV-KEP 177
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
+ +PE L ES F A D+++ G+VL+E+ E+ K+P +
Sbjct: 178 GESPIFWYAPESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAE 224
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS--- 417
+ M +D + + + +L N D + + +M ECW+ N N R S
Sbjct: 225 FMRM--IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 282
Query: 418 -ALRVKKTLIKLA 429
ALRV + +A
Sbjct: 283 LALRVDQIRDNMA 295
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 123/282 (43%), Gaps = 35/282 (12%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
+G+G +G+V + GE VAVK + + + W +E +I T L HE+I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT--LYHEHII 96
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
Y G L LV Y GSL D+L R ++ Q++ I G+ +LH +
Sbjct: 97 KYKGC--CEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH 154
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
+ HRD+ ++N+L+ + I DFGLA + + + + Y +
Sbjct: 155 Y--------IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-A 205
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDD 373
PE L E ++ + +D+++ G+ L+E+ ++ + + +L+ +
Sbjct: 206 PECLKE------YKFYYASDVWSFGVTLYELLTHCDSS---QSPPTKFLELIGIAQGQMT 256
Query: 374 MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
+ ++ + ++ LP D + +MK CW A+ R
Sbjct: 257 VLRLTELLERGERLPR---PDKCPAEVYHLMKNCWETEASFR 295
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 28 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 87
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 88 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 141 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 186
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 187 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 219
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 75 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 132 RTLAKQISLSECIGKGRYGE--VWRGVWHGENVAVK-IFFSRDEASWSRETEIYSTVL-- 186
+++ K + L + IG+G +G+ + + G +K I SR + E+ VL
Sbjct: 21 QSMEKYVRLQK-IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIV 243
++H NI+ Y S L++V Y G L+ +N Q++ + I
Sbjct: 80 MKHPNIVQY----RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
L H+H I HRDIKS+NI + +GT + DFG+A ++ N
Sbjct: 136 LALKHVHDR--------KILHRDIKSQNIFLTKDGTVQLGDFGIA----RVLNSTVELAR 183
Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+GT Y+SPEI + + K+DI+ALG VL+E+C
Sbjct: 184 ACIGTPYYLSPEICENKPYNN------KSDIWALGCVLYELC 219
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 75 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 77 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 130 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 175
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 176 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ +A+K+ F E RE EI S L
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH--L 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 70 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ +NG IADFG +V ++ S + +
Sbjct: 126 SYCHSK--------RVIHRDIKPENLLLGSNGELKIADFGWSV-HAPSSRRTTL-----C 171
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 172 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 68
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 69 RHPNILRLYGY----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + D+
Sbjct: 125 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDL-----C 170
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 171 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 201
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ +A+K+ F E RE EI S L
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH--L 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 70 RHPNILRLYGY----FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ +NG IADFG +V S++ D
Sbjct: 126 SYCHSK--------RVIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRDT----LC 171
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 172 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 202
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 47/305 (15%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFSRDEA---SWSRETEIYSTVLLRHENILG 194
+GKG +G V + GE VAVK E + RE EI + L+H+NI+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS--LQHDNIVK 78
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTE 252
Y G ++ L L+ + +GSL ++L ++ ++H ++++ I G+ +L T+
Sbjct: 79 YKGVCYSA--GRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
+ HRD+ ++NILV+ I DFGL Q + P +
Sbjct: 137 RY--------IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV-KEPGESPIFWY 187
Query: 313 SPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSF 371
+PE L ES F A D+++ G+VL+E+ E+ K+P + + M
Sbjct: 188 APESLTES-------KFSVASDVWSFGVVLYELF------TYIEKSKSPPAEFMRM--IG 232
Query: 372 DDMRKVICIDQQRPVLPNRW---VSDSTLNAMTKVMKECWHQNANVRLS----ALRVKKT 424
+D + + + +L N D + + +M ECW+ N N R S ALRV +
Sbjct: 233 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
Query: 425 LIKLA 429
+A
Sbjct: 293 RDNMA 297
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 73
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 74 YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IADFG +V ++ S + ++ GT Y+ P
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTEL-----CGTLDYLPP 175
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 176 EMIEGRMHDE------KVDLWSLGVLCYE 198
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 132/313 (42%), Gaps = 59/313 (18%)
Query: 134 LAKQISLS-----ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYS 183
AK+I +S E IG G +GEV RG VA+K RE +
Sbjct: 7 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 184 TVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKIC 239
+++ H NI+ G S + ++T + G+L + LN Q++ +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNS----MPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 122
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
I +G+ +L + + HRD+ ++NILV +N C ++DFGL+ + N D
Sbjct: 123 RGIASGMRYL--------AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE--NSSD 172
Query: 300 IPPNPRVGTK---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFE 355
+G K R+ +PE + F F A D ++ G+V+WEV F
Sbjct: 173 PTYTSSLGGKIPIRWTAPEAI-------AFRKFTSASDAWSYGIVMWEVMS-------FG 218
Query: 356 EYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
E PY D+ S D+ I D + P P+ ++ ++M +CW ++ N R
Sbjct: 219 ER--PYWDM-----SNQDVINAIEQDYRLPPPPD------CPTSLHQLMLDCWQKDRNAR 265
Query: 416 LSALRVKKTLIKL 428
+V L K+
Sbjct: 266 PRFPQVVSALDKM 278
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 66
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S + +VT Y S GSL D L T L Q++ + I +G+ ++
Sbjct: 67 ----QLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV N C +ADFGLA D R G K
Sbjct: 123 MNY--------VHRDLRAANILVGENLVCKVADFGLARLIE------DNEXTARQGAKFP 168
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
++ +PE + F K+D+++ G++L E+ + +
Sbjct: 169 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 124/289 (42%), Gaps = 56/289 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
K ++ + +G G++G V G W G+ +VA+K+ E S S + I + L HE
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICLSIVNGLVHL 249
++ G R ++++T Y + G L ++L R Q++++C + + +L
Sbjct: 66 LVQLYGVCTKQR----PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
++ F HRD+ ++N LV G ++DFGL+ +D G+K
Sbjct: 122 ESKQF--------LHRDLAARNCLVNDQGVVKVSDFGLS------RYVLDDEYTSSRGSK 167
Query: 310 ---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVP 366
R+ PE+L S F S K+DI+A G+++WE I+ K PY
Sbjct: 168 FPVRWSPPEVLMYSK----FSS--KSDIWAFGVLMWE---------IYSLGKMPYE---- 208
Query: 367 MDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
F + I Q + S+ +M CWH+ A+ R
Sbjct: 209 ---RFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCWHEKADER 250
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 242
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S GSL D L T L Q++ + I +G+ ++
Sbjct: 243 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV N C +ADFGLA D R G K
Sbjct: 298 -------RMNYVHRDLRAANILVGENLVCKVADFGLARLIE------DNEYTARQGAKFP 344
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
++ +PE + F K+D+++ G++L E+ + +
Sbjct: 345 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 242
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S GSL D L T L Q++ + I +G+ ++
Sbjct: 243 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV N C +ADFGLA D R G K
Sbjct: 298 -------RMNYVHRDLRAANILVGENLVCKVADFGLARLIE------DNEYTARQGAKFP 344
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
++ +PE + F K+D+++ G++L E+ + +
Sbjct: 345 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVW--HGENVAVKIFFS--RDEASWSRETEIYSTVLLRHENILGYIG 197
+ +G G +G V++G+W GENV + + R+ S EI L ++ +G
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEI-----LDEAYVMAGVG 77
Query: 198 SDMTSR--NSC--TQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
S SR C + + LVT +G L DH+ NR L ++ C+ I G+ +L
Sbjct: 78 SPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVK+ I DFGLA
Sbjct: 138 V--------RLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 144 IGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTS 202
+G+G +GEVW G W+G VA+K + + E LRHE ++ + +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV-----QLYA 329
Query: 203 RNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTEIFGTQGK 259
S +++VT Y S GSL D L T L Q++ + I +G+ ++ +
Sbjct: 330 VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----- 384
Query: 260 PAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK---RYMSPEI 316
HRD+++ NILV N C +ADFGLA D R G K ++ +PE
Sbjct: 385 ---VHRDLRAANILVGENLVCKVADFGLARLIE------DNEYTARQGAKFPIKWTAPEA 435
Query: 317 LDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
+ F K+D+++ G++L E+ + +
Sbjct: 436 A-------LYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 99
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
GY + T+++L+ Y G++Y L + + + + + N L + H+
Sbjct: 100 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ + HRDIK +N+L+ + G IADFG +V ++ S + + GT Y
Sbjct: 153 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 198
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
+ PE+++ ++ + K D+++LG++ +E
Sbjct: 199 LPPEMIEGRMHDE------KVDLWSLGVLCYE 224
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 73
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y + GSL D L T L Q++ + I +G+ ++
Sbjct: 74 ----QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 130 MNY--------VHRDLRAANILVGENLVCKVADFGLA 158
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 67
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S GSL D L L Q++ + I +G+ ++
Sbjct: 68 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 124 MNY--------VHRDLRAANILVGENLVCKVADFGLA 152
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 73 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL S+L G K
Sbjct: 126 EKKNF--------IHRDLAARNCLVGENHLVKVADFGL----SRLMTGDTF--TAHAGAK 171
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 172 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 204
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 16 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++ + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 76 LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 129 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX------TAHAGAK 174
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 175 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 207
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 73
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y + GSL D L T L Q++ + I +G+ ++
Sbjct: 74 ----QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 130 MNY--------VHRDLRAANILVGENLVCKVADFGLA 158
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 80 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 65
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S GSL D L L Q++ + I +G+ ++
Sbjct: 66 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 122 MNY--------VHRDLRAANILVGENLVCKVADFGLA 150
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 20 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 79
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++ + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 80 LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 133 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 178
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 179 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 211
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S GSL D L L Q++ + I +G+ ++
Sbjct: 77 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ +A+K+ F E RE EI S L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G S T+++L+ Y G++Y L + + + + + N L
Sbjct: 66 RHPNILRLYGYFHDS----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 122 SYCHSK--------KVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 75 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 34 ITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 93
Query: 196 IGSDMTSRNSCT---QLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT ++VT Y +G+L D+L NR + ++ + I + + +L
Sbjct: 94 LGV-------CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 147 EKKNF--------IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTY------TAHAGAK 192
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + +F K+D++A G++LWE+
Sbjct: 193 FPIKWTAPESL-------AYNTFSIKSDVWAFGVLLWEIA 225
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 73
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 74 YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IADFG +V ++ S + + GT Y+ P
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPP 175
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 176 EMIEGRMHDE------KVDLWSLGVLCYE 198
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 75 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 62
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 63 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 119 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----C 164
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 165 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 195
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 74
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 75 YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 128
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IADFG +V S++ D GT Y+ P
Sbjct: 129 ------RVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDT----LCGTLDYLPP 176
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 177 EMIEGRMHDE------KVDLWSLGVLCYE 199
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 76
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 77 YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 130
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IADFG +V ++ S + + GT Y+ P
Sbjct: 131 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPP 178
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 179 EMIEGRMHDE------KVDLWSLGVLCYE 201
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 78
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
GY + T+++L+ Y G++Y L + + + + + N L + H+
Sbjct: 79 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ + HRDIK +N+L+ + G IADFG +V ++ S + + GT Y
Sbjct: 132 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 177
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
+ PE+++ ++ + K D+++LG++ +E
Sbjct: 178 LPPEMIEGRMHDE------KVDLWSLGVLCYE 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 75
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 76 YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IADFG +V ++ S + + GT Y+ P
Sbjct: 130 ------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----CGTLDYLPP 177
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 178 EMIEGRMHDE------KVDLWSLGVLCYE 200
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 90
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
GY + T+++L+ Y G++Y L + + + + + N L + H+
Sbjct: 91 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ + HRDIK +N+L+ + G IADFG +V ++ S + + GT Y
Sbjct: 144 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 189
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
+ PE+++ ++ + K D+++LG++ +E
Sbjct: 190 LPPEMIEGRMHDE------KVDLWSLGVLCYE 215
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 64
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 65 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 121 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----C 166
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 167 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 197
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 66 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 122 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG- 197
IG+G +GEV++ G+ VA+K +E T EI LL+HEN++ I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 198 --SDMTSRNSC-TQLWLVTHY--HSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
+ + N C ++LV + H G L + L + TL+ ++ ++ ++NGL ++H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYYIH- 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ I HRD+K+ N+L+ +G +ADFGLA ++S N RV T Y
Sbjct: 143 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 312 MSPEIL 317
PE+L
Sbjct: 196 RPPELL 201
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 66 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 122 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTXL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 65
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 66 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 122 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----C 167
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 168 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 198
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 70 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 126 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----C 171
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 172 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 202
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG- 197
IG+G +GEV++ G+ VA+K +E T EI LL+HEN++ I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 198 --SDMTSRNSCT-QLWLVTHY--HSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
+ + N C ++LV + H G L + L + TL+ ++ ++ ++NGL ++H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYYIH- 141
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ I HRD+K+ N+L+ +G +ADFGLA ++S N RV T Y
Sbjct: 142 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 312 MSPEIL 317
PE+L
Sbjct: 195 RPPELL 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 68
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 69 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 125 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----C 170
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 171 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 201
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 76
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
GY + T+++L+ Y G++Y L + + + + + N L + H+
Sbjct: 77 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ + HRDIK +N+L+ + G IADFG +V ++ S + + GT Y
Sbjct: 130 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----CGTLDY 175
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
+ PE+++ ++ + K D+++LG++ +E
Sbjct: 176 LPPEMIEGRMHDE------KVDLWSLGVLCYE 201
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 68
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 69 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 125 SYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----C 170
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 171 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 201
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG- 197
IG+G +GEV++ G+ VA+K +E T EI LL+HEN++ I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 198 --SDMTSRNSCT-QLWLVTHY--HSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
+ + N C ++LV + H G L + L + TL+ ++ ++ ++NGL ++H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYYIH- 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ I HRD+K+ N+L+ +G +ADFGLA ++S N RV T Y
Sbjct: 143 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 312 MSPEIL 317
PE+L
Sbjct: 196 RPPELL 201
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 22/186 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIG- 197
IG+G +GEV++ G+ VA+K +E T EI LL+HEN++ I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 198 --SDMTSRNSCT-QLWLVTHY--HSF-GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
+ + N C ++LV + H G L + L + TL+ ++ ++ ++NGL ++H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS--EIKRVMQMLLNGLYYIH- 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ I HRD+K+ N+L+ +G +ADFGLA ++S N RV T Y
Sbjct: 143 -------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 312 MSPEIL 317
PE+L
Sbjct: 196 RPPELL 201
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 51/290 (17%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
+G+G +G+V + GE VAVK + + + W +E +I T L HE+I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT--LYHEHII 79
Query: 194 GYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
Y G D ++ L LV Y GSL D+L R ++ Q++ I G+ +LH+
Sbjct: 80 KYKGCCEDQGEKS----LQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPR 305
+ + HR++ ++N+L+ + I DFGLA + Y ++ D P
Sbjct: 136 QHY--------IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP---- 183
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
+ +PE L E ++ + +D+++ G+ L+E+ ++ + + +L+
Sbjct: 184 ---VFWYAPECLKE------YKFYYASDVWSFGVTLYELLTHCDSS---QSPPTKFLELI 231
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
+ + ++ + ++ LP D + +MK CW A+ R
Sbjct: 232 GIAQGQMTVLRLTELLERGERLPR---PDKCPCEVYHLMKNCWETEASFR 278
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G++GEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 13 ITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 73 LGV-------CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 126 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX------TAHAGAK 171
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 172 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 204
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S GSL D L L Q++ + I +G+ ++
Sbjct: 77 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ + NILV N C +ADFGLA
Sbjct: 133 MNY--------VHRDLAAANILVGENLVCKVADFGLA 161
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIF--FSRDEASWSRETEIYSTVLLRHENI 192
+ + L +G+G +GEVW G W+G VA+K + ++ +E ++ + RHE +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI--RHEKL 75
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHL 249
+ + + S +++VT Y S GSL D L L Q++ + I +G+ ++
Sbjct: 76 V-----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 131 ERMNY--------VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 36/217 (16%)
Query: 144 IGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLL---RHENILGYIGSD 199
IG G +G+V++GV G VA+K E+S E L RH +++ IG
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF- 103
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRT-----TLNHHQMMKICLSIVNGLVHLHTEIF 254
RN ++ L+ Y G+L HL + +++ Q ++IC+ GL +LHT
Sbjct: 104 CDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-- 158
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--GTKRYM 312
AI HRD+KS NIL+ N I DFG+ S+ ++D V GT Y+
Sbjct: 159 ------AIIHRDVKSINILLDENFVPKITDFGI----SKKGTELDQTHLXXVVKGTLGYI 208
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV-CRRT 348
PE + +K+D+Y+ G+VL+EV C R+
Sbjct: 209 DPEYFIKG------RLTEKSDVYSFGVVLFEVLCARS 239
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 53/286 (18%)
Query: 142 ECIGK-GRYGEVWRGVWHGENV--AVKIFFSRDEAS---WSRETEIYSTVLLRHENILGY 195
E IG+ G +G+V++ +V A K+ ++ E + E +I ++ H NI+
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC--DHPNIVKL 72
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYD---HLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
+ + N LW++ + + G++ L R L Q+ +C ++ L +LH
Sbjct: 73 LDAFYYENN----LWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN 127
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K+ NIL +G +ADFG++ ++ + + +GT +M
Sbjct: 128 --------KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRR---DSFIGTPYWM 176
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFD 372
+PE++ + D + KAD+++LG+ L E+ E + P+H+L P
Sbjct: 177 APEVVMCETSKDRPYDY-KADVWSLGITLIEMA----------EIEPPHHELNP------ 219
Query: 373 DMRKVICIDQQRP---VLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
MR ++ I + P P+RW S+ +K+C +N + R
Sbjct: 220 -MRVLLKIAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDAR 259
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 261 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 320
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 321 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HR++ ++N LV N +ADFGL S+L G K
Sbjct: 374 EKKNF--------IHRNLAARNCLVGENHLVKVADFGL----SRLMTGDTY--TAHAGAK 419
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 420 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 452
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 219 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 278
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR +N ++ + I + + +L
Sbjct: 279 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HR++ ++N LV N +ADFGL S+L G K
Sbjct: 332 EKKNF--------IHRNLAARNCLVGENHLVKVADFGL----SRLMTGDTY--TAHAGAK 377
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 378 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 410
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 144 IGKGRYGEVWRGVWH-GENVAVKIFFSRDEASWSRETEIYSTVLL---RHENILGYIGSD 199
IG G +G+V++GV G VA+K E+S E L RH +++ IG
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF- 103
Query: 200 MTSRNSCTQLWLVTHYHSFGSLYDHLNRT-----TLNHHQMMKICLSIVNGLVHLHTEIF 254
RN ++ L+ Y G+L HL + +++ Q ++IC+ GL +LHT
Sbjct: 104 CDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-- 158
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
AI HRD+KS NIL+ N I DFG++ ++L GT Y+ P
Sbjct: 159 ------AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK--GTLGYIDP 210
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV-CRRT 348
E + +K+D+Y+ G+VL+EV C R+
Sbjct: 211 EYFIKG------RLTEKSDVYSFGVVLFEVLCARS 239
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 51/290 (17%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
+G+G +G+V + GE VAVK + + + W +E +I T L HE+I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT--LYHEHII 79
Query: 194 GYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
Y G D ++ L LV Y GSL D+L R ++ Q++ I G+ +LH
Sbjct: 80 KYKGCCEDQGEKS----LQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPR 305
+ + HR++ ++N+L+ + I DFGLA + Y ++ D P
Sbjct: 136 QHY--------IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP---- 183
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
+ +PE L E ++ + +D+++ G+ L+E+ ++ + + +L+
Sbjct: 184 ---VFWYAPECLKE------YKFYYASDVWSFGVTLYELLTHCDSS---QSPPTKFLELI 231
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
+ + ++ + ++ LP D + +MK CW A+ R
Sbjct: 232 GIAQGQMTVLRLTELLERGERLPR---PDKCPCEVYHLMKNCWETEASFR 278
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 105/246 (42%), Gaps = 47/246 (19%)
Query: 139 SLSECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSRE-TEIYSTVLLRHENILG 194
L E IG G V E VA+K I + + S EI + H NI+
Sbjct: 13 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---------LNHHQMMKICLSIVNG 245
Y TS +LWLV S GS+ D + L+ + I ++ G
Sbjct: 73 Y----YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
L +LH K HRD+K+ NIL+ +G+ IADFG++ + L+ DI N
Sbjct: 129 LEYLH--------KNGQIHRDVKAGNILLGEDGSVQIADFGVS---AFLATGGDITRNKV 177
Query: 306 ----VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
VGT +M+PE++++ D KADI++ G+ E+ A G APY
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDF-----KADIWSFGITAIEL-----ATG-----AAPY 222
Query: 362 HDLVPM 367
H PM
Sbjct: 223 HKYPPM 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 105/246 (42%), Gaps = 47/246 (19%)
Query: 139 SLSECIGKGRYGEVWRG--VWHGENVAVK-IFFSRDEASWSRE-TEIYSTVLLRHENILG 194
L E IG G V E VA+K I + + S EI + H NI+
Sbjct: 18 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---------LNHHQMMKICLSIVNG 245
Y TS +LWLV S GS+ D + L+ + I ++ G
Sbjct: 78 Y----YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
L +LH K HRD+K+ NIL+ +G+ IADFG++ + L+ DI N
Sbjct: 134 LEYLH--------KNGQIHRDVKAGNILLGEDGSVQIADFGVS---AFLATGGDITRNKV 182
Query: 306 ----VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPY 361
VGT +M+PE++++ D KADI++ G+ E+ A G APY
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDF-----KADIWSFGITAIEL-----ATGA-----APY 227
Query: 362 HDLVPM 367
H PM
Sbjct: 228 HKYPPM 233
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 41/218 (18%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
+ +GKG++G V+ R +A+K+ F E RE EI S LRH
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRH 72
Query: 190 ENIL---GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNG 245
NIL GY + T+++L+ Y G +Y L + + + + + N
Sbjct: 73 PNILRLYGYF-------HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
L + H++ + HRDIK +N+L+ + G IADFG +V ++ S + +
Sbjct: 126 LSYCHSK--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL----- 171
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 172 XGTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 203
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 43/235 (18%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
+++ + IG G++G V G W + + VA+K + E + E E+ + L H ++
Sbjct: 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 66
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
G + C LVT + G L D+L R ++ +CL + G+ +L
Sbjct: 67 QLYGVCLEQAPIC----LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 121
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ + HRD+ ++N LV N ++DFG+ +D GTK
Sbjct: 122 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 168
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
++ SPE+ S K+D+++ G+++WEV F E K PY +
Sbjct: 169 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYEN 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 242
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++V Y S GSL D L T L Q++ + I +G+ ++
Sbjct: 243 ----QLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV N C +ADFGLA D R G K
Sbjct: 298 -------RMNYVHRDLRAANILVGENLVCKVADFGLARLIE------DNEYTARQGAKFP 344
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
++ +PE + F K+D+++ G++L E+ + +
Sbjct: 345 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 78
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
GY + T+++L+ Y G +Y L + + + + + N L + H+
Sbjct: 79 YGYF-------HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ + HRDIK +N+L+ + G IADFG +V ++ S + + GT Y
Sbjct: 132 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 177
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
+ PE+++ ++ + K D+++LG++ +E
Sbjct: 178 LPPEMIEGRMHDE------KVDLWSLGVLCYE 203
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++V Y S GSL D L L Q++ + I +G+ ++
Sbjct: 77 ----QLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV N C +ADFGLA D R G K
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLARLIE------DNEXTARQGAKFP 178
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
++ +PE + F K+D+++ G++L E+ + +
Sbjct: 179 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 13 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 72
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++ + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 73 LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 126 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX------TAHAGAK 171
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 172 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 204
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + + E LRHE ++
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLV- 243
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S GSL D L L Q++ + I +G+ ++
Sbjct: 244 ----QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV N C +ADFGL D R G K
Sbjct: 300 MNY--------VHRDLRAANILVGENLVCKVADFGLGRLIE------DNEYTARQGAKFP 345
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
++ +PE + F K+D+++ G++L E+ + +
Sbjct: 346 IKWTAPEAA-------LYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
+ L E +G G++GEVW G ++G VAVK S + S S + + L L+H+ ++
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
+ + + ++++T Y GSL D L + L ++++ + I G+ +
Sbjct: 78 -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
+ HRD+++ NILV +C IADFGLA D R G K
Sbjct: 133 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGAKF 178
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +P E+IN F K+D+++ G++L E+
Sbjct: 179 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
+ L E +G G++GEVW G ++G VAVK S + S S + + L L+H+ ++
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
+ + + ++++T Y GSL D L + L ++++ + I G+ +
Sbjct: 81 -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
+ HRD+++ NILV +C IADFGLA D R G K
Sbjct: 136 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGAKF 181
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +P E+IN F K+D+++ G++L E+
Sbjct: 182 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 35/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 75
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
G + T+++L+ Y G++Y L + + + + + N L + H++
Sbjct: 76 YGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ + G IA+FG +V ++ S + + GT Y+ P
Sbjct: 130 ------RVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTTL-----CGTLDYLPP 177
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E+++ ++ + K D+++LG++ +E
Sbjct: 178 EMIEGRMHDE------KVDLWSLGVLCYE 200
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++V Y S GSL D L L Q++ + I +G+ ++
Sbjct: 77 ----QLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
+ + L E +G G++GEVW G ++G VAVK S + S S + + L L+H+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
++ + + + ++++T Y GSL D L + L ++++ + I G+
Sbjct: 70 LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
+ + HRD+++ NILV +C IADFGLA D R G
Sbjct: 125 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGA 170
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
K ++ +P E+IN F K+D+++ G++L E+
Sbjct: 171 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 204
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
+G+G +G+V + GE VAVK + + W RE EI T L HE+I+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT--LYHEHIV 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
Y G QL V Y GSL D+L R + Q++ I G+ +LH +
Sbjct: 75 KYKGCCEDQGEKSVQL--VMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH 132
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPRVG 307
+ HR + ++N+L+ + I DFGLA + Y ++ D P
Sbjct: 133 Y--------IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF---- 180
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
+ +PE L E + + +D+++ G+ L+E+ +N + + +L+
Sbjct: 181 ---WYAPECLKEC------KFYYASDVWSFGVTLYELLTYCDSN---QSPHTKFTELIGH 228
Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
+ ++ + ++ LP D + +MK CW A+ R
Sbjct: 229 TQGQMTVLRLTELLERGERLPR---PDRCPCEIYHLMKNCWETEASFR 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
+ L E +G G++GEVW G ++G VAVK S + S S + + L L+H+ ++
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
+ + + ++++T Y GSL D L + L ++++ + I G+ +
Sbjct: 72 -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
+ HRD+++ NILV +C IADFGLA D R G K
Sbjct: 127 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGAKF 172
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +P E+IN F K+D+++ G++L E+
Sbjct: 173 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 204
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
+ L E +G G++GEVW G ++G VAVK S + S S + + L L+H+ ++
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 79
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
+ + + ++++T Y GSL D L + L ++++ + I G+ +
Sbjct: 80 -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
+ HRD+++ NILV +C IADFGLA D R G K
Sbjct: 135 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGAKF 180
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +P E+IN F K+D+++ G++L E+
Sbjct: 181 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++ + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 75 LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++VT Y S G L D L L Q++ + I +G+ ++
Sbjct: 77 ----QLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 47/288 (16%)
Query: 144 IGKGRYGEVWRGVWH------GENVAVKIFFS----RDEASWSRETEIYSTVLLRHENIL 193
+G+G +G+V + GE VAVK + + W RE EI T L HE+I+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT--LYHEHIV 73
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEI 253
Y G QL V Y GSL D+L R + Q++ I G+ +LH +
Sbjct: 74 KYKGCCEDQGEKSVQL--VMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH 131
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS------YSQLSNKMDIPPNPRVG 307
+ HR + ++N+L+ + I DFGLA + Y ++ D P
Sbjct: 132 Y--------IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF---- 179
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPM 367
+ +PE L E + + +D+++ G+ L+E+ +N + + +L+
Sbjct: 180 ---WYAPECLKEC------KFYYASDVWSFGVTLYELLTYCDSN---QSPHTKFTELIGH 227
Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
+ ++ + ++ LP D + +MK CW A+ R
Sbjct: 228 TQGQMTVLRLTELLERGERLPR---PDRCPCEIYHLMKNCWETEASFR 272
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
+ + L E +G G++GEVW G ++G VAVK S + S S + + L L+H+
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 70
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
++ + + + ++++T Y GSL D L + L ++++ + I G+
Sbjct: 71 LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
+ + HRD+++ NILV +C IADFGLA D R G
Sbjct: 126 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGA 171
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
K ++ +P E+IN F K+D+++ G++L E+
Sbjct: 172 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 78
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
GY + T+++L+ Y G++Y L + + + + + N L + H+
Sbjct: 79 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ + HRDIK +N+L+ + G IADFG +V ++ S + + GT Y
Sbjct: 132 K--------RVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDY 177
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
+ PE ++ + + K D+++LG++ +E
Sbjct: 178 LPPEXIEGRXHDE------KVDLWSLGVLCYE 203
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
+ + L E +G G++GEVW G ++G VAVK S + S S + + L L+H+
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 71
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
++ + + + ++++T Y GSL D L + L ++++ + I G+
Sbjct: 72 LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
+ + HRD+++ NILV +C IADFGLA D R G
Sbjct: 127 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEXTAREGA 172
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
K ++ +P E+IN F K+D+++ G++L E+
Sbjct: 173 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 136 KQISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLL 187
+ + +GKG++G V+ R +A+K+ F E RE EI S L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--L 68
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGL 246
RH NIL G + T+++L+ Y G++Y L + + + + + N L
Sbjct: 69 RHPNILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H++ + HRDIK +N+L+ + G IA+FG +V ++ S + +
Sbjct: 125 SYCHSK--------RVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTTL-----C 170
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
GT Y+ PE+++ ++ + K D+++LG++ +E
Sbjct: 171 GTLDYLPPEMIEGRMHDE------KVDLWSLGVLCYE 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
+ + L E +G G++GEVW G ++G VAVK S + S S + + L L+H+
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 64
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
++ + + + ++++T Y GSL D L + L ++++ + I G+
Sbjct: 65 LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
+ + HRD+++ NILV +C IADFGLA D R G
Sbjct: 120 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGA 165
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
K ++ +P E+IN F K+D+++ G++L E+
Sbjct: 166 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 199
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++ + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 75 LG-------VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HRD+ ++N LV N +ADFGL+ + + G K
Sbjct: 128 EKKNF--------IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------TAHAGAK 173
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 174 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 206
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 118/292 (40%), Gaps = 61/292 (20%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ I L + +G G++GEVW G ++ VAVK + + L N++
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL---------KPGTMSVQAFLEEANLMK 63
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGL 246
+ D R ++++T Y + GSL D L +++ I G+
Sbjct: 64 TLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 123
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
++ + + HRD+++ N+LV + C IADFGLA D R
Sbjct: 124 AYIERKNY--------IHRDLRAANVLVSESLMCKIADFGLARVIE------DNEYTARE 169
Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
G K ++ +P E+IN CF K+D+++ G++L+E+ K PY
Sbjct: 170 GAKFPIKWTAP----EAINFGCFTI--KSDVWSFGILLYEIVTYG---------KIPYPG 214
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
D V+ Q +P ++ + + +MK CW + A R
Sbjct: 215 RTNAD--------VMTALSQGYRMPR---VENCPDELYDIMKMCWKEKAEER 255
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 46/220 (20%)
Query: 144 IGKGRYGEVW---RGVWHGENVAVKIF---------FSRDEASWSR-ETEIYSTVLL--- 187
+G G YGEV H E A+K+ +S D + + EIY+ + L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEK-AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 188 -RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNG 245
H NI+ + +LVT ++ G L++ + NR + I I++G
Sbjct: 103 LDHPNIIKLFDVFEDKK----YFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG 158
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV---IADFGLAVSYSQLSNKMDIPP 302
+ +LH K I HRDIK +NIL++ + + I DFGL+ +S+ D
Sbjct: 159 ICYLH--------KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-----DYKL 205
Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
R+GT Y++PE+L + N C D+++ G++++
Sbjct: 206 RDRLGTAYYIAPEVLKKKYNEKC-------DVWSCGVIMY 238
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 38/212 (17%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILG 194
+GKG +GEV + G+ AVK+ R D+ S RE ++ L H NI+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIMK 90
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
+LV ++ G L+D + +R + +I +++G+ ++H
Sbjct: 91 L----YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH--- 143
Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
K I HRD+K +N+L+++ + I DFGL+ + + S KM ++GT
Sbjct: 144 -----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM----KDKIGTAY 193
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y++PE+L + + C D+++ G++L+
Sbjct: 194 YIAPEVLHGTYDEKC-------DVWSTGVILY 218
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++V Y S GSL D L L Q++ + I +G+ ++
Sbjct: 77 ----QLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 41/212 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENIL-- 193
+GKG++G V+ R +A+K+ F E RE EI S LRH NIL
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH--LRHPNILRL 74
Query: 194 -GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
GY + T+++L+ Y G++Y L + + + + + N L + H+
Sbjct: 75 YGYF-------HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ + HRDIK +N+L+ + G IADFG + ++ S + + GT Y
Sbjct: 128 K--------RVIHRDIKPENLLLGSAGELKIADFGWSC-HAPSSRRTTL-----SGTLDY 173
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE 343
+ PE+++ ++ + K D+++LG++ +E
Sbjct: 174 LPPEMIEGRMHDE------KVDLWSLGVLCYE 199
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 56/221 (25%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENIL- 193
+GKG +GEV + G+ AVK+ R D+ S RE ++ L H NI+
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIMK 114
Query: 194 --------GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVN 244
GY +LV ++ G L+D + +R + +I +++
Sbjct: 115 LYEFFEDKGY-------------FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 161
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIP 301
G+ ++H K I HRD+K +N+L+++ + I DFGL+ + + S KM
Sbjct: 162 GITYMH--------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM--- 209
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
++GT Y++PE+L + + C D+++ G++L+
Sbjct: 210 -KDKIGTAYYIAPEVLHGTYDEKC-------DVWSTGVILY 242
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 56/221 (25%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENIL- 193
+GKG +GEV + G+ AVK+ R D+ S RE ++ L H NI+
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIMK 113
Query: 194 --------GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVN 244
GY +LV ++ G L+D + +R + +I +++
Sbjct: 114 LYEFFEDKGY-------------FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIP 301
G+ ++H K I HRD+K +N+L+++ + I DFGL+ + + S KM
Sbjct: 161 GITYMH--------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM--- 208
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
++GT Y++PE+L + + C D+++ G++L+
Sbjct: 209 -KDKIGTAYYIAPEVLHGTYDEKC-------DVWSTGVILY 241
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL--LRHENILGY 195
I++ +G G+YGEV+ GVW ++ V + +++ E + V+ ++H N++
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 196 IGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHL 249
+G CT+ +++T + ++G+L D+L NR ++ ++ + I + + +L
Sbjct: 282 LG-------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ F HR++ ++N LV N +ADFGL S+L G K
Sbjct: 335 EKKNF--------IHRNLAARNCLVGENHLVKVADFGL----SRLMTGDTY--TAHAGAK 380
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE L + F K+D++A G++LWE+
Sbjct: 381 FPIKWTAPESL-------AYNKFSIKSDVWAFGVLLWEIA 413
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 54/305 (17%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
+++ + IG G++G V G W + + VA+K + E + E E+ + L H ++
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 65
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
G + C LV + G L D+L R ++ +CL + G+ +L
Sbjct: 66 QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ ++ HRD+ ++N LV N ++DFG+ +D GTK
Sbjct: 121 -------EASVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 167
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
++ SPE+ S K+D+++ G+++WEV F E K PY + +
Sbjct: 168 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYENRSNSE 212
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
+D+ + +P L + V ++M CW + R + R+ + L +
Sbjct: 213 -VVEDISTGFRL--YKPRLASTHV--------YQIMNHCWKERPEDRPAFSRLLRQLAAI 261
Query: 429 ACADM 433
A + +
Sbjct: 262 AASGL 266
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
+ L E +G G++GEVW G ++G VAVK S + S S + + L L+H+ ++
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
+ + + ++++T Y GSL D L + L ++++ + I G+ +
Sbjct: 78 -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
+ HRD+++ NILV +C IADFGLA D R G K
Sbjct: 133 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGAKF 178
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +P E+IN F K+D+++ G++L E+
Sbjct: 179 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
+ + L E +G G++GEVW G ++G VAVK S + S S + + L L+H+
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 74
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
++ + + + ++++T Y GSL D L + L ++++ + I G+
Sbjct: 75 LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
+ + HRD+++ NILV +C IADFGLA D R G
Sbjct: 130 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGA 175
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
K ++ +P E+IN F K+D+++ G++L E+
Sbjct: 176 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
+ + L E +G G++GEVW G ++G VAVK S + S S + + L L+H+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
++ + + + ++++T Y GSL D L + L ++++ + I G+
Sbjct: 70 LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
+ + HRD+++ NILV +C IADFGLA D R G
Sbjct: 125 IEERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGA 170
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
K ++ +P E+IN F K+D+++ G++L E+
Sbjct: 171 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 204
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 35 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 92 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 146
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV +N + DFGL + Y
Sbjct: 147 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 198
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 199 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 233
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 7 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 64 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV +N + DFGL + Y
Sbjct: 119 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 171 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 205
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 4 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 61 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 115
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV +N + DFGL + Y
Sbjct: 116 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 167
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 168 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 202
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
+ L E +G G++GEVW G ++G VAVK S + S S + + L L+H+ ++
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 81
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
+ + + ++++T Y GSL D L + L ++++ + I G+ +
Sbjct: 82 -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
+ HRD+++ NILV +C IADFGLA D R G K
Sbjct: 137 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGAKF 182
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +P E+IN F K+D+++ G++L E+
Sbjct: 183 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 12 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 69 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV +N + DFGL + Y
Sbjct: 124 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 176 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHENIL 193
+ L E +G G+ GEVW G ++G VAVK S + S S + + L L+H+ ++
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLH 250
+ + + ++++T Y GSL D L + L ++++ + I G+ +
Sbjct: 72 -----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK- 309
+ HRD+++ NILV +C IADFGLA D R G K
Sbjct: 127 ERNY--------IHRDLRAANILVSDTLSCKIADFGLARLIE------DAEXTAREGAKF 172
Query: 310 --RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +P E+IN F K+D+++ G++L E+
Sbjct: 173 PIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 204
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 7 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 64 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV +N + DFGL + Y
Sbjct: 119 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 171 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 205
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 9 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 66 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV +N + DFGL + Y
Sbjct: 121 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 172
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 173 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 38/212 (17%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILG 194
+GKG +GEV + G+ AVK+ R D+ S RE ++ L H NI+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIMK 96
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
+LV ++ G L+D + +R + +I +++G+ ++H
Sbjct: 97 L----YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH--- 149
Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
K I HRD+K +N+L+++ + I DFGL+ + + S KM ++GT
Sbjct: 150 -----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM----KDKIGTAY 199
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y++PE+L + + C D+++ G++L+
Sbjct: 200 YIAPEVLHGTYDEKC-------DVWSTGVILY 224
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 10 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 67 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV +N + DFGL + Y
Sbjct: 122 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 173
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 174 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 42/228 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 7 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 64 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV----SYSQLSN 296
+ L +L ++ F HRDI ++N+LV +N + DFGL+ S ++
Sbjct: 119 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKAS 170
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K +P ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 171 KGKLP-------IKWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
+++ + IG G++G V G W + + VA+K S E + E E+ + L H ++
Sbjct: 28 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEV--MMKLSHPKLV 85
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
G + C LV + G L D+L R ++ +CL + G+ +L
Sbjct: 86 QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 140
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ + HRD+ ++N LV N ++DFG+ +D GTK
Sbjct: 141 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 187
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
++ SPE+ S K+D+++ G+++WEV F E K PY +
Sbjct: 188 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYEN 227
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
+++ + IG G++G V G W + + VA+K + E + E E+ + L H ++
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 63
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
G + C LV + G L D+L R ++ +CL + G+ +L
Sbjct: 64 QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 118
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ + HRD+ ++N LV N ++DFG+ +D GTK
Sbjct: 119 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 165
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
++ SPE+ S K+D+++ G+++WEV F E K PY +
Sbjct: 166 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYEN 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 70 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
+++ + IG G++G V G W + + VA+K + E + E E+ + L H ++
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 65
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
G + C LV + G L D+L R ++ +CL + G+ +L
Sbjct: 66 QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 120
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ + HRD+ ++N LV N ++DFG+ +D GTK
Sbjct: 121 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 167
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
++ SPE+ S K+D+++ G+++WEV F E K PY +
Sbjct: 168 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYEN 207
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 387 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 444 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV +N + DFGL + Y
Sbjct: 499 QLSTALAYLESKRF--------VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 550
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 551 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 585
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 144 IGKGRYGEVWRG-VWHGENVAVKIFFSR----DEASWSRETEIYSTVLLRHENILGYIGS 198
+G+G +G+V++G + G VAVK E + E E+ S + H N+L G
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAV--HRNLLRLRGF 103
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHL-----NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
MT T+ LV Y + GS+ L ++ L+ + +I L GL +LH
Sbjct: 104 CMTP----TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 159
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV-GTKRYM 312
P I HRD+K+ NIL+ V+ DFGLA +L + D V GT ++
Sbjct: 160 -----DPKIIHRDVKAANILLDEEFEAVVGDFGLA----KLMDYKDXHVXXAVRGTIGHI 210
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
+PE L +S +K D++ G++L E+ +A
Sbjct: 211 APEYLSTG------KSSEKTDVFGYGVMLLELITGQRA 242
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 54/301 (17%)
Query: 137 QISLSECIGKGRYGEVWRGVW-HGENVAVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
+++ + IG G++G V G W + + VA+K + E + E E+ + L H ++
Sbjct: 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV--MMKLSHPKLV 68
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
G + C LV + G L D+L R ++ +CL + G+ +L
Sbjct: 69 QLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE- 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ + HRD+ ++N LV N ++DFG+ +D GTK
Sbjct: 124 -------EACVIHRDLAARNCLVGENQVIKVSDFGMT------RFVLDDQYTSSTGTKFP 170
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
++ SPE+ S K+D+++ G+++WEV F E K PY + +
Sbjct: 171 VKWASPEVFSFS------RYSSKSDVWSFGVLMWEV---------FSEGKIPYENRSNSE 215
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
+D+ + +P L + V ++M CW + R + R+ + L ++
Sbjct: 216 -VVEDISTGFRL--YKPRLASTHV--------YQIMNHCWRERPEDRPAFSRLLRQLAEI 264
Query: 429 A 429
A
Sbjct: 265 A 265
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 70 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L +G+G +GEVW G W+G VA+K + + E LRHE ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV- 76
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHT 251
+ + S +++V Y S G L D L L Q++ + I +G+ ++
Sbjct: 77 ----QLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+++ NILV N C +ADFGLA
Sbjct: 133 MNY--------VHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVL---LRHEN 191
+ + L E +G G++GEVW G ++G VAVK S + S S + + L L+H+
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVK---SLKQGSMSPDAFLAEANLMKQLQHQR 65
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
++ + + + ++++T Y GSL D L + L ++++ + I G+
Sbjct: 66 LV-----RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
+ + HR++++ NILV +C IADFGLA D R G
Sbjct: 121 IEERNY--------IHRNLRAANILVSDTLSCKIADFGLARLIE------DNEYTAREGA 166
Query: 309 K---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
K ++ +P E+IN F K+D+++ G++L E+
Sbjct: 167 KFPIKWTAP----EAINYGTFTI--KSDVWSFGILLTEIV 200
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 136/305 (44%), Gaps = 75/305 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
FGLA + + N R+ K +M+PE L + + ++D+++ G+++WE
Sbjct: 201 FGLARDINNIDXXKKT-TNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGVLMWE- 251
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY +P++ F +++ +D +P + N + +M
Sbjct: 252 --------IFTLGGSPYPG-IPVEELFKLLKEGHRMD--KPA--------NCTNELYMMM 292
Query: 405 KECWH 409
++CWH
Sbjct: 293 RDCWH 297
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 136/305 (44%), Gaps = 75/305 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
FGLA + + N R+ K +M+PE L + + ++D+++ G+++WE
Sbjct: 201 FGLARDINNIDXXKKT-TNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGVLMWE- 251
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY +P++ F +++ +D +P + N + +M
Sbjct: 252 --------IFTLGGSPYPG-IPVEELFKLLKEGHRMD--KPA--------NCTNELYMMM 292
Query: 405 KECWH 409
++CWH
Sbjct: 293 RDCWH 297
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 37/210 (17%)
Query: 144 IGKGRYGEVW---RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENILGYI 196
+G G YGEV V H E A+KI + S S +++ V LL H NI+
Sbjct: 45 LGSGAYGEVLLCRDKVTHVER-AIKII-RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
RN +LV + G L+D + +R N I +++G+ +LH
Sbjct: 103 DFFEDKRN----YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH----- 153
Query: 256 TQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
K I HRD+K +N+L+++ + I DFGL+ + KM R+GT Y+
Sbjct: 154 ---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN-QKKM----KERLGTAYYI 205
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+L + + C D++++G++L+
Sbjct: 206 APEVLRKKYDEKC-------DVWSIGVILF 228
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIF--FSRDEASWSRETEIYSTVLLRHENI 192
+ + L + +G G++GEVW G W+G VA+K + S+ E +I L+H+ +
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKK--LKHDKL 66
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT---TLNHHQMMKICLSIVNGLVHL 249
+ + + S +++VT Y + GSL D L L ++ + + G+ ++
Sbjct: 67 V-----QLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ HRD++S NILV C IADFGLA D R G K
Sbjct: 122 ERMNY--------IHRDLRSANILVGNGLICKIADFGLARLIE------DNEXTARQGAK 167
Query: 310 ---RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVCRRTK 349
++ +PE + F K+D+++ G++L E+ + +
Sbjct: 168 FPIKWTAPEAA-------LYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 70 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 61/292 (20%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ I L + +G G++GEVW G ++ VAVK + + L N++
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL---------KPGTMSVQAFLEEANLMK 62
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTTLNH---HQMMKICLSIVNGL 246
+ D R ++++T + + GSL D L +++ I G+
Sbjct: 63 TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
++ + + HRD+++ N+LV + C IADFGLA D R
Sbjct: 123 AYIERKNY--------IHRDLRAANVLVSESLMCKIADFGLARVIE------DNEYTARE 168
Query: 307 GTK---RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHD 363
G K ++ +P E+IN CF K+++++ G++L+E+ K PY
Sbjct: 169 GAKFPIKWTAP----EAINFGCFTI--KSNVWSFGILLYEIVTYG---------KIPYPG 213
Query: 364 LVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
D V+ Q +P ++ + + +MK CW + A R
Sbjct: 214 RTNAD--------VMSALSQGYRMPRM---ENCPDELYDIMKMCWKEKAEER 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 136/305 (44%), Gaps = 75/305 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
FGLA + + + N R+ K +M+PE L + + ++D+++ G+++WE
Sbjct: 201 FGLARDINNIDYYKNT-TNGRLPVK-WMAPEALFDRVYT------HQSDVWSFGVLMWE- 251
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY +P++ F +++ +D+ + N + +M
Sbjct: 252 --------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNELYMMM 292
Query: 405 KECWH 409
++CWH
Sbjct: 293 RDCWH 297
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 70 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------XGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 68 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 121
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 122 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 168
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 169 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 196
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 70 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 70 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G YGEV V E VAVKI + + EI +L HEN++
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 70 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 124 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 171 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 198
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
+ +M++CWH
Sbjct: 288 LYMMMRDCWH 297
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 144 IGKGRYGEVWRG-VWHGENVAVKIFFSRDEASWSRE----TEIYSTVLLRHENILGYIGS 198
+G+G +G+V++G + G VAVK ++E + E TE+ + H N+L G
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHL-----NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
MT T+ LV Y + GS+ L ++ L+ + +I L GL +LH
Sbjct: 96 CMTP----TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC 151
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
P I HRD+K+ NIL+ V+ DFGLA + +G +++
Sbjct: 152 -----DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG---HIA 203
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
PE L +S +K D++ G++L E+ +A
Sbjct: 204 PEYLSTG------KSSEKTDVFGYGVMLLELITGQRA 234
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 48/259 (18%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
+G G +G+V++ G A K+ ++ E + E EI +T H I+ +G+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC--DHPYIVKLLGA 76
Query: 199 DMTSRNSCTQLWLVTHYHSFGS---LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+LW++ + G+ + L+R L Q+ +C ++ L LH++
Sbjct: 77 YYHD----GKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK--- 128
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K+ N+L+ G +ADFG++ + K D +GT +M+PE
Sbjct: 129 -----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFIGTPYWMAPE 179
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
++ D + KADI++LG+ L E+ + + P+H+L P MR
Sbjct: 180 VVMCETMKDTPYDY-KADIWSLGITLIEMA----------QIEPPHHELNP-------MR 221
Query: 376 KVICIDQQRP---VLPNRW 391
++ I + P + P++W
Sbjct: 222 VLLKIAKSDPPTLLTPSKW 240
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 35/227 (15%)
Query: 141 SECIGKGRYGEVWRGVWH---GENVAVKIFFSRDEASW-SRETEIYSTVLLRHENILGYI 196
E +GKG +G+ + V H GE + +K DE + + E+ L H N+L +I
Sbjct: 15 GEVLGKGCFGQAIK-VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNGLVHLHTEIF 254
G + +L +T Y G+L + + Q + I +G+ +LH+
Sbjct: 74 GVLYKDK----RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM-- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA------VSYSQLSNKMDIPPNPR--- 305
I HRD+ S N LV+ N V+ADFGLA + + + P +
Sbjct: 128 ------NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 306 -VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN 351
VG +M+PE+ IN ++ +K D+++ G+VL E+ R A+
Sbjct: 182 VVGNPYWMAPEM----INGRSYD--EKVDVFSFGIVLCEIIGRVNAD 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMRIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
+ +M++CWH
Sbjct: 288 LYMMMRDCWH 297
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 48/259 (18%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEAS---WSRETEIYSTVLLRHENILGYIGS 198
+G G +G+V++ G A K+ ++ E + E EI +T H I+ +G+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC--DHPYIVKLLGA 84
Query: 199 DMTSRNSCTQLWLVTHYHSFGS---LYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+LW++ + G+ + L+R L Q+ +C ++ L LH++
Sbjct: 85 YYHD----GKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK--- 136
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K+ N+L+ G +ADFG++ + K D +GT +M+PE
Sbjct: 137 -----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFIGTPYWMAPE 187
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
++ D + KADI++LG+ L E+ + + P+H+L P MR
Sbjct: 188 VVMCETMKDTPYDY-KADIWSLGITLIEMA----------QIEPPHHELNP-------MR 229
Query: 376 KVICIDQQRP---VLPNRW 391
++ I + P + P++W
Sbjct: 230 VLLKIAKSDPPTLLTPSKW 248
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 7 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 64 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV + DFGL + Y
Sbjct: 119 QLSTALAYLESKRF--------VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 171 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIITLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
+ +M++CWH
Sbjct: 288 LYMMMRDCWH 297
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILGY 195
L + +G+G YGEV V E VAVKI + + EI +L HEN++ +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 70 YGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGTK 309
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 124 ------GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGTL 170
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 171 PYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILGY 195
L + +G+G YGEV V E VAVKI + + EI +L HEN++ +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 71 YGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGTK 309
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 125 ------GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGTL 171
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 172 PYVAPELLKRR----EFHA-EPVDVWSCGIVL 198
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIINLLGA-------CTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
+ +M++CWH
Sbjct: 288 LYMMMRDCWH 297
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 141
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 142 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 228 TT---LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 246
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 247 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 293
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 294 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 333
Query: 400 MTKVMKECWH 409
+ +M++CWH
Sbjct: 334 LYMMMRDCWH 343
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIINLLGA-------CTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWH 409
+ +M++CWH
Sbjct: 288 LYMMMRDCWH 297
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 136/310 (43%), Gaps = 85/310 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 87
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 88 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 140
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 141 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 192
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 193 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 239
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 240 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDKPA----------NCTNE 279
Query: 400 MTKVMKECWH 409
+ +M++CWH
Sbjct: 280 LYMMMRDCWH 289
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 85/316 (26%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 84
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 85 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 189
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 190 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 236
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 237 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 276
Query: 400 MTKVMKECWHQNANVR 415
+ +M++CWH + R
Sbjct: 277 LYMMMRDCWHAVPSQR 292
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 85/316 (26%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 96 MIGKHKNIIHLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLAARNVLVTENNVMKIAD 200
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 247
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 248 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 287
Query: 400 MTKVMKECWHQNANVR 415
+ +M++CWH + R
Sbjct: 288 LYMMMRDCWHAVPSQR 303
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG- 194
S+ IG+G +GEV+ R G+ A+K + ET + ++ G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+I + ++ +L + + G L+ HL++ + M+ I+ GL H+H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RD+K NIL+ +G I+D GLA +S+ P+ VGT Y
Sbjct: 311 RF--------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGTHGY 356
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
M+PE+L + + D AD ++LG +L+++ R
Sbjct: 357 MAPEVLQKGVAYDS-----SADWFSLGCMLFKLLR 386
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG- 194
S+ IG+G +GEV+ R G+ A+K + ET + ++ G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+I + ++ +L + + G L+ HL++ + M+ I+ GL H+H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RD+K NIL+ +G I+D GLA +S+ P+ VGT Y
Sbjct: 311 RF--------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGTHGY 356
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
M+PE+L + + D AD ++LG +L+++ R
Sbjct: 357 MAPEVLQKGVAYDS-----SADWFSLGCMLFKLLR 386
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 85/316 (26%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLL-- 187
+++L + +G+G +G+V G E V V + +D+A+ +++ S + +
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 82
Query: 188 ---RHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHL--------------NR 227
+H+NI+ +G+ CTQ L+++ Y S G+L ++L NR
Sbjct: 83 MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 228 T---TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ ++ + G+ +L ++ HRD+ ++N+LV N IAD
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQ--------KCIHRDLTARNVLVTENNVMKIAD 187
Query: 285 FGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGL 339
FGLA + Y + + +P ++M+PE L + + ++D+++ G+
Sbjct: 188 FGLARDINNIDYYKKTTNGRLP-------VKWMAPEALFDRVYT------HQSDVWSFGV 234
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
++WE IF +PY +P++ F +++ +D+ + N
Sbjct: 235 LMWE---------IFTLGGSPYPG-IPVEELFKLLKEGHRMDK----------PANCTNE 274
Query: 400 MTKVMKECWHQNANVR 415
+ +M++CWH + R
Sbjct: 275 LYMMMRDCWHAVPSQR 290
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
L + IGKG + +V R + G+ VAVKI S S + E+ +L H NI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
T + L+LV Y S G ++D+L + + IV+ + + H +
Sbjct: 78 LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
I HRD+K++N+L+ + IADFG + ++ NK+D G+ Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT----FCGSPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
PE+ + D E D+++LG++L+ +
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 38/212 (17%)
Query: 143 CIGKGRYGEVW--RGVWHGENVAVKIFFSR------DEASWSRETEIYSTVLLRHENILG 194
+GKG +GEV + G+ AVK+ R D+ S RE ++ L H NI
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ--LDHPNIXK 90
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
+LV ++ G L+D + +R + +I +++G+ + H
Sbjct: 91 L----YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXH--- 143
Query: 254 FGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
K I HRD+K +N+L+++ + I DFGL+ + D ++GT
Sbjct: 144 -----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD-----KIGTAY 193
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y++PE+L + + C D+++ G++L+
Sbjct: 194 YIAPEVLHGTYDEKC-------DVWSTGVILY 218
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG- 194
S+ IG+G +GEV+ R G+ A+K + ET + ++ G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
+I + ++ +L + + G L+ HL++ + M I+ GL H+H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RD+K NIL+ +G I+D GLA +S+ P+ VGT Y
Sbjct: 311 RF--------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGTHGY 356
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
M+PE+L + + D AD ++LG +L+++ R
Sbjct: 357 MAPEVLQKGVAYDS-----SADWFSLGCMLFKLLR 386
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
L + IGKG + +V R + G+ VAVKI S S + E+ +L H NI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
T + L+LV Y S G ++D+L + + IV+ + + H +
Sbjct: 78 LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
I HRD+K++N+L+ + IADFG + ++ NK+D G+ Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT----FCGSPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
PE+ + D E D+++LG++L+ +
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG- 194
S+ IG+G +GEV+ R G+ A+K + ET + ++ G
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 195 --YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHT 251
+I + ++ +L + + G L+ HL++ + M I+ GL H+H
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 309
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RD+K NIL+ +G I+D GLA +S+ P+ VGT Y
Sbjct: 310 RF--------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGTHGY 355
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
M+PE+L + + D AD ++LG +L+++ R
Sbjct: 356 MAPEVLQKGVAYDS-----SADWFSLGCMLFKLLR 385
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 132/315 (41%), Gaps = 59/315 (18%)
Query: 132 RTLAKQISLS-----ECIGKGRYGEVWRG--VWHGEN---VAVKIFFSRDEASWSRETEI 181
R AK+I +S + IG G +GEV G G+ VA+K S R+
Sbjct: 24 REFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS 83
Query: 182 YSTVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMK 237
++++ H N++ G S T + ++T + GSL L N Q++
Sbjct: 84 EASIMGQFDHPNVIHLEGVVTKS----TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG 139
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNK 297
+ I G+ +L + HRD+ ++NILV +N C ++DFGL+ +
Sbjct: 140 MLRGIAAGMKYLADMNY--------VHRDLAARNILVNSNLVCKVSDFGLSRFLE--DDT 189
Query: 298 MDIPPNPRVGTK---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGI 353
D +G K R+ +PE + + F A D+++ G+V+WEV
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQ-------YRKFTSASDVWSYGIVMWEVMSYG----- 237
Query: 354 FEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNAN 413
+ PY D+ D VI +Q LP S L+ ++M +CW ++ N
Sbjct: 238 ----ERPYWDMTNQD--------VINAIEQDYRLPPPMDCPSALH---QLMLDCWQKDRN 282
Query: 414 VRLSALRVKKTLIKL 428
R ++ TL K+
Sbjct: 283 HRPKFGQIVNTLDKM 297
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 46/230 (20%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-EN--VAVKIFFSRDEASWS-RETEIYSTV 185
IQR ++I L CIG+G++G+V +G++ EN +AV I ++ S S RE + +
Sbjct: 387 IQR---ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 186 LLR---HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHHQMMKICL 240
+R H +I+ IG + + N +W++ + G L L + +L+ ++
Sbjct: 444 TMRQFDHPHIVKLIG--VITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL------AVSYSQL 294
+ L +L ++ F HRDI ++N+LV + DFGL + Y
Sbjct: 499 QLSTALAYLESKRF--------VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS 550
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K+ I ++M+P ESIN F S +D++ G+ +WE+
Sbjct: 551 KGKLPI---------KWMAP----ESINFRRFTS--ASDVWMFGVCMWEI 585
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 136 KQISLSECIGKGRYGEVW-----RGVWHGENVAVKIFFSRDEASWSRETEIYST--VLLR 188
+ L + +G G YG+V+ G G+ A+K+ ++ TE T +L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLV 247
H ++ + + + T+L L+ Y + G L+ HL+ R H++ IV L
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY--SQLSNKMDIPPNPR 305
HLH K I +RDIK +NIL+ +NG V+ DFGL+ + + D
Sbjct: 174 HLH--------KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF----- 220
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
GT YM+P+I+ D K D ++LG++++E+
Sbjct: 221 CGTIEYMAPDIVR---GGDSGHD-KAVDWWSLGVLMYELL 256
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
+G+G YG V R G VA+K F D+ ++ EI LRHEN++ +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + +LV + L D L L++ + K I+NG+ H+
Sbjct: 93 CKKKK----RWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
I HRDIK +NILV +G + DFG A + + D V T+ Y +PE+L
Sbjct: 144 ---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD----DEVATRWYRAPELL 196
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+ K D++A+G ++ E+
Sbjct: 197 VGDVKYG-----KAVDVWAIGCLVTEM 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 26/224 (11%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN---ILGYIGS 198
IG+G YG V + V G+ +AVK S + ++ + V++R + I+ + G+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 199 DMTSRNS--CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
+ C +L + + +Y L+ + + KI L+ V L HL +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLD-DVIPEEILGKITLATVKALNHLKENL--- 145
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
I HRDIK NIL+ +G + DFG++ QL + I G + YM+PE
Sbjct: 146 ----KIIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDS--IAKTRDAGCRPYMAPER 196
Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCR----RTKANGIFEE 356
+D S + ++ ++D+++LG+ L+E+ K N +F++
Sbjct: 197 IDPSASRQGYDV--RSDVWSLGITLYELATGRFPYPKWNSVFDQ 238
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
L + IGKG + +V R + G+ VAVKI S S + E+ +L H NI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
T + L+LV Y S G ++D+L + + IV+ + + H +
Sbjct: 78 LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
I HRD+K++N+L+ + IADFG + ++ NK+D G Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLD----AFCGAPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
PE+ + D E D+++LG++L+ +
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 125/319 (39%), Gaps = 53/319 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR------HENILGY 195
IG G YG V+ R G VA+K + + + LLR H N++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTE 252
+ TSR + H L +L++ L + + + GL LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K +NILV + GT +ADFGLA YS +M + +P V T Y
Sbjct: 132 --------CIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMAL--DPVVVTLWYR 178
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRT----------KANGIFEEYKAPYH 362
+PE+L +S D++++G + E+ RR + IF+ P
Sbjct: 179 APEVLLQSTYA------TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK 422
D P D S R RPV + V + +++ E N + R+SA R
Sbjct: 233 DDWPRDVSLP--RGAFPPRGPRPV---QSVVPEMEESGAQLLLEMLTFNPHKRISAFR-- 285
Query: 423 KTLIKLACADMYIHCSDGD 441
A Y+H +G+
Sbjct: 286 ------ALQHSYLHKDEGN 298
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 40/239 (16%)
Query: 144 IGKGRYGEVWRGVWHGEN--VAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ + VA+K+ F E RE EI + L H NIL
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH--LHHPNILRL 88
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
R +++L+ Y G LY L ++ T + + I + + L++ H
Sbjct: 89 YNYFYDRR----RIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH---- 140
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
GK I HRDIK +N+L+ G IADFG +V L K GT Y+ P
Sbjct: 141 ---GKKVI-HRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT------MCGTLDYLPP 190
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFE--EYKAPYHDLVPMDPSF 371
E+++ ++ + K D++ +G++ +E+ N FE + Y +V +D F
Sbjct: 191 EMIEGRMHNE------KVDLWCIGVLCYELL---VGNPPFESASHNETYRRIVKVDLKF 240
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 144 IGKGRYGEVW------RGVWHGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENIL 193
+G+G +G+V G GE VAVK A +E EI L HENI+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN--LYHENIV 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
Y G + + + + L+ + GSL ++L N+ +N Q +K + I G+ +L
Sbjct: 75 KYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL-- 130
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
G HRD+ ++N+LV++ I DFGL + + + + R +
Sbjct: 131 ------GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPVFW 183
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN----GIFEEYKAPYHDLVPM 367
+PE L +S + + +D+++ G+ L E+ ++ +F + P H + +
Sbjct: 184 YAPECLMQS------KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV 237
Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
+ +++ ++ P PN + + ++M++CW + R S
Sbjct: 238 TRLVNTLKE----GKRLPCPPN------CPDEVYQLMRKCWEFQPSNRTS 277
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
L + IGKG + +V R + G+ VAVKI S S + E+ +L H NI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
T + L+LV Y S G ++D+L + IV+ + + H +
Sbjct: 78 LFEVIETEKT----LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
I HRD+K++N+L+ + IADFG + ++ NK+D G Y +
Sbjct: 134 --------IVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLD----AFCGAPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
PE+ + D E D+++LG++L+
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILY 204
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
L + IGKG + +V R + G+ VAV+I S S + E+ +L H NI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
T + L+LV Y S G ++D+L + + IV+ + + H +
Sbjct: 78 LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
I HRD+K++N+L+ + IADFG + ++ NK+D G+ Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT----FCGSPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
PE+ + D E D+++LG++L+ +
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 36/226 (15%)
Query: 143 CIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGS-- 198
+G+G +G+V R A+K +E + +E+ L H+ ++ Y +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 199 -------DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHH--QMMKICLSIVNGLVHL 249
MT+ + L++ Y G+LYD ++ LN + ++ I+ L ++
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN--KMDIPPNP--- 304
H++ I HRD+K NI + + I DFGLA + + + K+D P
Sbjct: 133 HSQ--------GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 305 -----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+GT Y++ E+LD + + + +K D+Y+LG++ +E+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYN-----EKIDMYSLGIIFFEMI 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENIL 193
L + IGKG + +V R V G VAVKI + + + + +++ V +L H NI+
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKII-DKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
T + L+LV Y S G ++D+L + + IV+ + + H +
Sbjct: 78 KLFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K++N+L+ + IADFG + ++ + NK+D G+ Y
Sbjct: 134 Y--------IVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDT----FCGSPPYA 180
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+ + D E D+++LG++L+
Sbjct: 181 APELF-QGKKYDGPE----VDVWSLGVILY 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
L + IGKG + +V R + G+ VAV+I S S + E+ +L H NI+
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
T + L+LV Y S G ++D+L + + IV+ + + H +
Sbjct: 78 LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
I HRD+K++N+L+ + IADFG + ++ NK+D G+ Y +
Sbjct: 134 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLD----EFCGSPPYAA 180
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
PE+ + D E D+++LG++L+ +
Sbjct: 181 PELF-QGKKYDGPE----VDVWSLGVILYTLV 207
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 144 IGKGRYGEVW------RGVWHGENVAVKIFFSRDE----ASWSRETEIYSTVLLRHENIL 193
+G+G +G+V G GE VAVK A +E EI L HENI+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRN--LYHENIV 86
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
Y G + + + + L+ + GSL ++L N+ +N Q +K + I G+ +L
Sbjct: 87 KYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL-- 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
G HRD+ ++N+LV++ I DFGL + + + + R +
Sbjct: 143 ------GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEXXTVKDDRDSPVFW 195
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKAN----GIFEEYKAPYHDLVPM 367
+PE L +S + + +D+++ G+ L E+ ++ +F + P H + +
Sbjct: 196 YAPECLMQS------KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV 249
Query: 368 DPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
+ +++ ++ P PN + + ++M++CW + R S
Sbjct: 250 TRLVNTLKE----GKRLPCPPN------CPDEVYQLMRKCWEFQPSNRTS 289
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 48/234 (20%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSDM 200
+GKG YG V+ G + + +A+K RD S EI L+H+NI+ Y+GS
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS-- 87
Query: 201 TSRNSCTQLWL---------VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
S N ++++ +G L D N T+ + I+ GL +LH
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQ-----ILEGLKYLHD 140
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
I HRDIK N+L+ T +G I+DFG + + ++ + GT +
Sbjct: 141 N--------QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET----FTGTLQ 188
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
YM+PEI+D+ K ADI++LG + E+ A G K P+++L
Sbjct: 189 YMAPEIIDKGPRG----YGKAADIWSLGCTIIEM-----ATG-----KPPFYEL 228
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR ++D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT Y GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L F HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL+ +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 134/331 (40%), Gaps = 76/331 (22%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEAS-----WSRET 179
+Q I L +G+G +G+V+ + + + V + +D + + RE
Sbjct: 7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREA 66
Query: 180 EIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR------------ 227
E+ + L+HE+I+ + G + L +V Y G L L
Sbjct: 67 ELLTN--LQHEHIVKFYGVCVEG----DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN 120
Query: 228 --TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
T L QM+ I I G+V+L ++ F HRD+ ++N LV N I DF
Sbjct: 121 PPTELTQSQMLHIAQQIAAGMVYLASQHF--------VHRDLATRNCLVGENLLVKIGDF 172
Query: 286 GL-----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLV 340
G+ + Y ++ +P R+M P ESI F + ++D+++LG+V
Sbjct: 173 GMSRDVYSTDYYRVGGHTMLP-------IRWMPP----ESIMYRKFTT--ESDVWSLGVV 219
Query: 341 LWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAM 400
LWE IF K P++ L + + CI Q R + R + +
Sbjct: 220 LWE---------IFTYGKQPWYQL-------SNNEVIECITQGRVLQRPR----TCPQEV 259
Query: 401 TKVMKECWHQNANVRLSALRVKKTLIKLACA 431
++M CW + ++R + + L LA A
Sbjct: 260 YELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR Y+D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT Y GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L + HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL+ +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR Y+D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT Y GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L + HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL+ +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 88 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 145 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEXXSVHNK 193
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 194 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 241
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 242 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 282
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEA----SWSRETEIYSTVL 186
+ + +G G +G+V G VAVK+ S A + E +I S L
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 106
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLS 241
+HENI+ +G+ CT + ++T Y +G L + L R + L I S
Sbjct: 107 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 242 IVN--GLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQL 294
++ L+H +++ QG +A HRD+ ++N+L+ I DFGLA
Sbjct: 160 TLSTRDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SN + + N R+ K +M+PE + DC + ++D+++ G++LWE+
Sbjct: 218 SNYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 259
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR--ETEIYSTVLLRHENILG 194
L + +G+G GEV V E VAVKI + + EI +L HEN++
Sbjct: 9 DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEI 253
+ G R +L Y S G L+D + + + ++ G+V+LH
Sbjct: 69 FYGH----RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY-----SQLSNKMDIPPNPRVGT 308
I HRDIK +N+L+ I+DFGLA + +L NKM GT
Sbjct: 123 ------IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM-------CGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVL 341
Y++PE+L F + + D+++ G+VL
Sbjct: 170 LPYVAPELLKRR----EFHA-EPVDVWSCGIVL 197
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR ++D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT Y GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L + HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGLA +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLARVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 143 CIGKGRYGEVWRG--VWHGENVAVKIFFSRDEA-SWSRETEIYSTVLLRHENILGYIGSD 199
+GKG YG V+ G + + +A+K RD S EI L+H+NI+ Y+GS
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 73
Query: 200 MTSRNSCTQLWL---------VTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLH 250
S N ++++ +G L D N T+ + I+ GL +LH
Sbjct: 74 -FSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTK-----QILEGLKYLH 125
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
I HRDIK N+L+ T +G I+DFG + + ++ + GT
Sbjct: 126 DN--------QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET----FTGTL 173
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+YM+PEI+D+ K ADI++LG + E+
Sbjct: 174 QYMAPEIIDKGPRG----YGKAADIWSLGCTIIEMA 205
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 41/220 (18%)
Query: 144 IGKGRYGE-------------VWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
IG G YG VW+ + +G + E + RE L+H
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE--------LKHP 65
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----LNHHQMMKICLSIVNG 245
NI+ Y D + T L++V Y G L + + T L+ ++++ +
Sbjct: 66 NIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
L H + G + HRD+K N+ + + DFGLA ++ N +
Sbjct: 124 LKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA----RILNHDEDFAKEF 176
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
VGT YMSPE M+ +K+DI++LG +L+E+C
Sbjct: 177 VGTPYYMSPE------QMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILG 194
L + IGKG + +V R + G+ VAVKI S S + E+ +L H NI+
Sbjct: 11 LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
T + L+LV Y S G ++D+L + + IV+ + + H +
Sbjct: 71 LFEVIETEKT----LYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
I HRD+K++N+L+ + IADFG + ++ NK+D G+ Y +
Sbjct: 127 --------IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDT----FCGSPPYAA 173
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEVC 345
PE+ + D E D+++LG++L+ +
Sbjct: 174 PELF-QGKKYDGPE----VDVWSLGVILYTLV 200
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR Y+D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 17 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 76
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT Y GS
Sbjct: 77 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 130
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L + HRD+ ++NIL+ +N
Sbjct: 131 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 182
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL+ +Y+ K+ I R+ SPE + + F
Sbjct: 183 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 226
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 227 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 270
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 271 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR------HENILGY 195
IG G YG V+ R G VA+K + + + LLR H N++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTE 252
+ TSR + H L +L++ L + + + GL LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K +NILV + GT +ADFGLA YS +M + P V T Y
Sbjct: 132 --------CIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMAL--APVVVTLWYR 178
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRT----------KANGIFEEYKAPYH 362
+PE+L +S D++++G + E+ RR + IF+ P
Sbjct: 179 APEVLLQSTYA------TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK 422
D P D S R RPV + V + +++ E N + R+SA R
Sbjct: 233 DDWPRDVSLP--RGAFPPRGPRPV---QSVVPEMEESGAQLLLEMLTFNPHKRISAFR-- 285
Query: 423 KTLIKLACADMYIHCSDGD 441
A Y+H +G+
Sbjct: 286 ------ALQHSYLHKDEGN 298
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 44/218 (20%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L + +G G++GEVW ++ VAVK + + E L+H+ ++
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV- 240
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHT 251
+ + + ++++T + + GSL D L + + K+ I G+ +
Sbjct: 241 ----KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV + C IADFGLA RVG K
Sbjct: 297 RNY--------IHRDLRAANILVSASLVCKIADFGLA----------------RVGAKFP 332
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE ++ F SF K+D+++ G++L E+
Sbjct: 333 IKWTAPEAIN-------FGSFTIKSDVWSFGILLMEIV 363
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 133/338 (39%), Gaps = 87/338 (25%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEAS---WSRET 179
+Q + I L +G+G +G+V+ + + VAVK A+ + RE
Sbjct: 9 VQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREA 68
Query: 180 EIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN------------- 226
E+ + L+HE+I+ + G L +V Y G L L
Sbjct: 69 ELLTN--LQHEHIVKFYGVC----GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 227 ----RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI 282
+ L QM+ I I +G+V+L ++ F HRD+ ++N LV N I
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLASQHF--------VHRDLATRNCLVGANLLVKI 174
Query: 283 ADFGL-----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL 337
DFG+ + Y ++ +P R+M P ESI F + ++D+++
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLP-------IRWMPP----ESIMYRKFTT--ESDVWSF 221
Query: 338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQ----QRPVLPNRWVS 393
G++LWE IF K P+ L + + CI Q +RP + + V
Sbjct: 222 GVILWE---------IFTYGKQPWFQL-------SNTEVIECITQGRVLERPRVCPKEVY 265
Query: 394 DSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
D VM CW + RL+ + K L L A
Sbjct: 266 D--------VMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 41/230 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEA----SWSRETEIYSTVL 186
+ + +G G +G+V G VAVK+ S A + E +I S L
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 106
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLS 241
+HENI+ +G+ CT + ++T Y +G L + L R + L I S
Sbjct: 107 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159
Query: 242 IVN--GLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQL 294
+ L+H +++ QG +A HRD+ ++N+L+ I DFGLA
Sbjct: 160 TASTRDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SN + + N R+ K +M+PE + DC + ++D+++ G++LWE+
Sbjct: 218 SNYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 259
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 133/312 (42%), Gaps = 77/312 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 89 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPS 140
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 192
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
DFGLA + N R+ K +M+PE L + I ++D+++ G++LWE
Sbjct: 193 DFGLARDIHHIDXXKKT-TNGRLPVK-WMAPEALFDRIYT------HQSDVWSFGVLLWE 244
Query: 344 VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKV 403
IF +PY VP++ F +++ +D+ + N + +
Sbjct: 245 ---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTNELYMM 284
Query: 404 MKECWHQNANVR 415
M++CWH + R
Sbjct: 285 MRDCWHAVPSQR 296
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 29 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 86 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 142
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 143 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 191
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 192 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 239
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 240 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 280
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 24 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAVK--SLNRITDIGEVSQFLTEGIIMKDF 80
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 81 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 137
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 138 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 186
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 187 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 234
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 235 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 275
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 50 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 107 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 163
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 164 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 212
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 213 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 260
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 261 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 301
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 89 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 146 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 194
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 195 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 242
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 243 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 283
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR------HENILGY 195
IG G YG V+ R G VA+K + + + LLR H N++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVHLHTE 252
+ TSR + H L +L++ L + + + GL LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K +NILV + GT +ADFGLA YS +M + P V T Y
Sbjct: 132 --------CIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMAL--FPVVVTLWYR 178
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVCRRT----------KANGIFEEYKAPYH 362
+PE+L +S D++++G + E+ RR + IF+ P
Sbjct: 179 APEVLLQSTYA------TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVK 422
D P D S R RPV + V + +++ E N + R+SA R
Sbjct: 233 DDWPRDVSLP--RGAFPPRGPRPV---QSVVPEMEESGAQLLLEMLTFNPHKRISAFR-- 285
Query: 423 KTLIKLACADMYIHCSDGD 441
A Y+H +G+
Sbjct: 286 ------ALQHSYLHKDEGN 298
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 89 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 146 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 194
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 195 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 242
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 243 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 283
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 87 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 144 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 192
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 193 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 240
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 241 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 281
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 144 IGKGRYGE-------------VWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
IG G YG VW+ + +G + E + RE L+H
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE--------LKHP 65
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----LNHHQMMKICLSIVNG 245
NI+ Y D + T L++V Y G L + + T L+ ++++ +
Sbjct: 66 NIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
L H + G + HRD+K N+ + + DFGLA ++ N
Sbjct: 124 LKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA----RILNHDTSFAKAF 176
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
VGT YMSPE M+ +K+DI++LG +L+E+C
Sbjct: 177 VGTPYYMSPE------QMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 27 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 84 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 141 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 189
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 190 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 237
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 238 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 278
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 51 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 108 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 164
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 165 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 213
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 214 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 261
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 262 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 302
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 88 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ +L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 145 MKYLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNK 193
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 194 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 241
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 242 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 282
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 87/311 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 129
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 130 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 181
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 182 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 233
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
DFGLA + Y + + +P ++M+PE L + I ++D+++ G
Sbjct: 234 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 280
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE IF +PY VP++ F +++ +D+ + N
Sbjct: 281 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 320
Query: 399 AMTKVMKECWH 409
+ +M++CWH
Sbjct: 321 ELYMMMRDCWH 331
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 74 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 125
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 126 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 177
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
DFGLA + Y + + +P ++M+PE L + I ++D+++ G
Sbjct: 178 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 224
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE IF +PY VP++ F +++ +D+ + N
Sbjct: 225 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 264
Query: 399 AMTKVMKECWHQNANVR 415
+ +M++CWH + R
Sbjct: 265 ELYMMMRDCWHAVPSQR 281
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 89 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPS 140
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 192
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
DFGLA + Y + + +P ++M+PE L + I ++D+++ G
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE IF +PY VP++ F +++ +D+ + N
Sbjct: 240 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 279
Query: 399 AMTKVMKECWHQNANVR 415
+ +M++CWH + R
Sbjct: 280 ELYMMMRDCWHAVPSQR 296
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 141 SECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL--RHENILGYI 196
SE +G+G Y +V V +G+ AVKI + S SR T+ ++NIL I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFG 255
T+ +LV GS+ H+ + N + ++ + L LHT+
Sbjct: 78 ----EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK--- 130
Query: 256 TQGKPAIAHRDIKSKNILVKTN---GTCVIADFGLAVSYSQLSNKMDIPPNPRV----GT 308
IAHRD+K +NIL ++ I DF L S +L+N P + G+
Sbjct: 131 -----GIAHRDLKPENILCESPEKVSPVKICDFDLG-SGMKLNNSCTPITTPELTTPCGS 184
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
YM+PE+++ + F K+ D+++LG+VL+
Sbjct: 185 AEYMAPEVVEVFTDQATFYD-KRCDLWSLGVVLY 217
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 90 SHPNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 146
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ L ++ F HRD+ ++N ++ T +ADFGLA L + D N +
Sbjct: 147 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA--RDMLDKEFDSVHN-K 195
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 196 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 243
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 244 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 284
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 81
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 82 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 133
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 134 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 185
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
DFGLA + Y + + +P ++M+PE L + I ++D+++ G
Sbjct: 186 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 232
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE IF +PY VP++ F +++ +D+ + N
Sbjct: 233 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 272
Query: 399 AMTKVMKECWHQNANVR 415
+ +M++CWH + R
Sbjct: 273 ELYMMMRDCWHAVPSQR 289
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 89 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 140
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 192
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
DFGLA + Y + + +P ++M+PE L + I ++D+++ G
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE IF +PY VP++ F +++ +D+ + N
Sbjct: 240 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 279
Query: 399 AMTKVMKECWHQNANVR 415
+ +M++CWH + R
Sbjct: 280 ELYMMMRDCWHAVPSQR 296
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 41/220 (18%)
Query: 144 IGKGRYGE-------------VWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
IG G YG VW+ + +G + E + RE L+H
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE--------LKHP 65
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----LNHHQMMKICLSIVNG 245
NI+ Y D + T L++V Y G L + + T L+ ++++ +
Sbjct: 66 NIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
L H + G + HRD+K N+ + + DFGLA ++ N
Sbjct: 124 LKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA----RILNHDTSFAKTF 176
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
VGT YMSPE M+ +K+DI++LG +L+E+C
Sbjct: 177 VGTPYYMSPE------QMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 87/311 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 80
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 81 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 132
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 133 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 184
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
DFGLA + Y + + +P ++M+PE L + I ++D+++ G
Sbjct: 185 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 231
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE IF +PY VP++ F +++ +D+ + N
Sbjct: 232 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 271
Query: 399 AMTKVMKECWH 409
+ +M++CWH
Sbjct: 272 ELYMMMRDCWH 282
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 87/317 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 89 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPS 140
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 141 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 192
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
DFGLA + Y + + +P ++M+PE L + I ++D+++ G
Sbjct: 193 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE IF +PY VP++ F +++ +D+ + N
Sbjct: 240 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 279
Query: 399 AMTKVMKECWHQNANVR 415
+ +M++CWH + R
Sbjct: 280 ELYMMMRDCWHAVPSQR 296
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIF------FSRDEASWSRETEIYSTVLLRHENIL 193
+ IG+G V R V G AVKI S ++ RE T +LR
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+I + + S S + ++LV G L+D+L + L+ + I S++ + LH
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN 219
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K +NIL+ N ++DFG + ++ GT Y+
Sbjct: 220 --------NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL-----CGTPGYL 266
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PEIL S++ K+ D++A G++L+
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILF 296
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHTEI 253
T +L+LV + S L D ++ + L + I ++ GL H+
Sbjct: 72 DVIHTE----NKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR 310
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T
Sbjct: 126 -------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLW 171
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
Y +PEIL + C DI++LG + E+ R
Sbjct: 172 YRAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR ++D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT Y GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L + HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL+ +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 87/311 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG---------ENVAVKIFFS----RDEASWSRETEIYS 183
++ L + +G+G +G+V G VAVK+ S +D + E E+
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 77
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLN-------------- 226
++ +H+NI+ +G+ CTQ L+++ Y S G+L ++L
Sbjct: 78 -MIGKHKNIINLLGA-------CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS 129
Query: 227 ---RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
L+ ++ + G+ +L ++ HRD+ ++N+LV + IA
Sbjct: 130 HNPEEQLSSKDLVSCAYQVARGMEYLASK--------KCIHRDLAARNVLVTEDNVMKIA 181
Query: 284 DFGLA-----VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
DFGLA + Y + + +P ++M+PE L + I ++D+++ G
Sbjct: 182 DFGLARDIHHIDYYKKTTNGRLP-------VKWMAPEALFDRIYT------HQSDVWSFG 228
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE IF +PY VP++ F +++ +D+ + N
Sbjct: 229 VLLWE---------IFTLGGSPYPG-VPVEELFKLLKEGHRMDK----------PSNCTN 268
Query: 399 AMTKVMKECWH 409
+ +M++CWH
Sbjct: 269 ELYMMMRDCWH 279
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR ++D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT Y GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L + HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL+ +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR ++D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT Y GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEYMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L + HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 70/314 (22%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
A IS+ + +G G +GEV G + + ++V I + + + E I
Sbjct: 32 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ- 90
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIV 243
H NI+ G S+ + +VT Y GSL L + Q++ + I
Sbjct: 91 -FDHPNIIRLEGVVTKSK----PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 145
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLS 295
+G+ +L + HRD+ ++NIL+ +N C ++DFGL+ +Y+
Sbjct: 146 SGMKYLSDMGY--------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIF 354
K+ I R+ SPE + + F A D+++ G+VLWEV
Sbjct: 198 GKIPI---------RWTSPEAI-------AYRKFTSASDVWSYGIVLWEV---------M 232
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
+ PY ++ D + +D+ + P A+ ++M +CW ++ N
Sbjct: 233 SYGERPYWEMSNQD-------VIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNN 281
Query: 415 RLSALRVKKTLIKL 428
R ++ L KL
Sbjct: 282 RPKFEQIVSILDKL 295
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 14/117 (11%)
Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
T+ + KI +SIV L HLH+++ ++ HRD+K N+L+ G + DFG++
Sbjct: 105 TIPEDILGKIAVSIVKALEHLHSKL-------SVIHRDVKPSNVLINALGQVKMCDFGIS 157
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
D+ + G K YM+PE ++ +N + K+DI++LG+ + E+
Sbjct: 158 GYLVD-----DVAKDIDAGCKPYMAPERINPELNQKGYSV--KSDIWSLGITMIELA 207
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHTEI 253
T +L+LV + S L D ++ + L + I ++ GL H+
Sbjct: 71 DVIHTE----NKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR 310
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T
Sbjct: 125 -------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLW 170
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
Y +PEIL + C DI++LG + E+ R
Sbjct: 171 YRAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 202
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 32/223 (14%)
Query: 133 TLAKQISLSECIGKGRYGEVWRG--VWHGENVAVK------IFFSRDEASWSRETEIYST 184
TLA + + IG+G++ EV+R + G VA+K + ++ A +E ++
Sbjct: 30 TLA-NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLSI 242
L H N++ Y S N + + + H + + + K + +
Sbjct: 89 --LNHPNVIKYYAS-FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
+ L H+H+ + HRDIK N+ + G + D GL +S +
Sbjct: 146 CSALEHMHSR--------RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA---- 193
Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+ VGT YMSPE + E N F K+DI++LG +L+E+
Sbjct: 194 HSLVGTPYYMSPERIHE--NGYNF----KSDIWSLGCLLYEMA 230
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 41/239 (17%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFF-----SRDEASWSRETEIY 182
+ R + ++ L + +GKG YG VW+ + GE VAVK F S D RE I
Sbjct: 3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMIL 62
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
T L HENI+ + ++ ++ ++LV Y L+ + L + +
Sbjct: 63 -TELSGHENIVNLL--NVLRADNDRDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQL 118
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY---SQLSNKMD 299
+ + +LH+ + HRD+K NIL+ +ADFGL+ S+ +++N +
Sbjct: 119 IKVIKYLHS--------GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 300 IPPNPR--------------VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ N V T+ Y +PEIL + + K D+++LG +L E+
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEIL-----LGSTKYTKGIDMWSLGCILGEI 224
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 70/314 (22%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
A IS+ + +G G +GEV G + + ++V I + + + E I
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ- 73
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIV 243
H NI+ G S+ + +VT Y GSL L + Q++ + I
Sbjct: 74 -FDHPNIIRLEGVVTKSK----PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLS 295
+G+ +L + HRD+ ++NIL+ +N C ++DFGL+ +Y+
Sbjct: 129 SGMKYLSDMGY--------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIF 354
K+ I R+ SPE + + F A D+++ G+VLWEV
Sbjct: 181 GKIPI---------RWTSPEAI-------AYRKFTSASDVWSYGIVLWEV---------M 215
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
+ PY ++ D + +D+ + P A+ ++M +CW ++ N
Sbjct: 216 SYGERPYWEMSNQD-------VIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNN 264
Query: 415 RLSALRVKKTLIKL 428
R ++ L KL
Sbjct: 265 RPKFEQIVSILDKL 278
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIF-------FSRDEASWSRETEIYSTVLLR---- 188
E +G+G V R + + AVKI FS +E RE + +LR
Sbjct: 10 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 69
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLV 247
H NI+ + T+ T +LV G L+D+L + TL+ + KI +++ +
Sbjct: 70 HPNIIQLKDTYETN----TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
LH K I HRD+K +NIL+ + + DFG + ++ G
Sbjct: 126 ALH--------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV-----CG 172
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
T Y++PEI++ S+N + K+ D+++ G++++
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 38/227 (16%)
Query: 142 ECIGKGRYGEVWRGVWHGE--NVAVKI--FFSRDEASWSRETEIYSTVLLRHENILGYIG 197
+C+G+G +G V+ + N A+K +R+ A E+ + L H I+ Y
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 198 S--------DMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQM---MKICLSIVNG 245
+ + + L++ +L D +N R T+ + + I L I
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI-PPNP 304
+ LH++ + HRD+K NI + + DFGL + Q + + P P
Sbjct: 131 VEFLHSK--------GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 305 -------RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+VGTK YMSP E I+ + + K DI++LGL+L+E+
Sbjct: 183 AYARHTGQVGTKLYMSP----EQIHGNSYSH--KVDIFSLGLILFEL 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
+G G YGEV + G A+KI + S + V L H NI+
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
RN +LV + G L+D + R + I +++G +LH
Sbjct: 89 FFEDKRN----YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH------ 138
Query: 257 QGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
K I HRD+K +N+L+++ + I DFGL+ + ++ KM R+GT Y++
Sbjct: 139 --KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKM----KERLGTAYYIA 191
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
PE+L + + C D+++ G++L+
Sbjct: 192 PEVLRKKYDEKC-------DVWSCGVILY 213
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-NVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L + +G G++GEVW ++ VAVK + + E L+H+ ++
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV- 73
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHT 251
+ + + ++++T + + GSL D L + + K+ I G+ +
Sbjct: 74 ----KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV + C IADFGLA D R G K
Sbjct: 130 RNY--------IHRDLRAANILVSASLVCKIADFGLARVIE------DNEYTAREGAKFP 175
Query: 310 -RYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +P E+IN F K+D+++ G++L E+
Sbjct: 176 IKWTAP----EAINFGSFTI--KSDVWSFGILLMEIV 206
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVL----LRHENILGYIG 197
+G G YGEV + G A+KI + S + V L H NI+
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
RN +LV + G L+D + R + I +++G +LH
Sbjct: 72 FFEDKRN----YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH------ 121
Query: 257 QGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
K I HRD+K +N+L+++ + I DFGL+ + ++ KM R+GT Y++
Sbjct: 122 --KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKM----KERLGTAYYIA 174
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
PE+L + + C D+++ G++L+
Sbjct: 175 PEVLRKKYDEKC-------DVWSCGVILY 196
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 41/214 (19%)
Query: 226 NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADF 285
+R L+ ++KI + H+H + KP I HRD+K +N+L+ GT + DF
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQ------KPPIIHRDLKVENLLLSNQGTIKLCDF 182
Query: 286 GLAV--------SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL 337
G A S+S + R T Y +PEI+D N F +K DI+AL
Sbjct: 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN---FPIGEKQDIWAL 239
Query: 338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTL 397
G +L+ +C R F+D K+ ++ + + P+ D+
Sbjct: 240 GCILYLLCFRQHP--------------------FEDGAKLRIVNGKYSIPPH----DTQY 275
Query: 398 NAMTKVMKECWHQNANVRLSALRVKKTLIKLACA 431
+++ N RLS V L ++A A
Sbjct: 276 TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG-- 197
E IG G +G+V++ G+ +K +E + E E+ + L H NI+ Y G
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA---EREVKALAKLDHVNIVHYNGCW 73
Query: 198 ----------SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVN 244
S +SR+ L++ + G+L + + L+ +++ I
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ ++H++ + +RD+K NI + I DFGL S K D
Sbjct: 134 GVDYIHSK--------KLINRDLKPSNIFLVDTKQVKIGDFGLVTSL-----KNDGKRXR 180
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT RYMSPE + + K+ D+YALGL+L E+
Sbjct: 181 SKGTLRYMSPE------QISSQDYGKEVDLYALGLILAEL 214
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIF-------FSRDEASWSRETEIYSTVLLR---- 188
E +G+G V R + + AVKI FS +E RE + +LR
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLV 247
H NI+ + T+ T +LV G L+D+L + TL+ + KI +++ +
Sbjct: 83 HPNIIQLKDTYETN----TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
LH K I HRD+K +NIL+ + + DFG + ++ G
Sbjct: 139 ALH--------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV-----CG 185
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
T Y++PEI++ S+N + K+ D+++ G++++
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 126/323 (39%), Gaps = 58/323 (17%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLR------HEN 191
IG G YG V+ R G VA+K + I STV LLR H N
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPI-STVREVALLRRLEAFEHPN 75
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICLSIVNGLVH 248
++ + TSR + H L +L++ L + + + GL
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
LH I HRD+K +NILV + GT +ADFGLA YS +M + P V T
Sbjct: 136 LHAN--------CIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMAL--TPVVVT 182
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT----------KANGIFEEYK 358
Y +PE+L +S D++++G + E+ RR + IF+
Sbjct: 183 LWYRAPEVLLQSTYA------TPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 359 APYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSA 418
P D P D S R RPV + V + +++ E N + R+SA
Sbjct: 237 LPPEDDWPRDVSLP--RGAFPPRGPRPV---QSVVPEMEESGAQLLLEMLTFNPHKRISA 291
Query: 419 LRVKKTLIKLACADMYIHCSDGD 441
R A Y+H +G+
Sbjct: 292 FR--------ALQHSYLHKDEGN 306
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 91 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAVK--SLNRITDIGEVSQFLTEGIIMKDF 147
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 148 SHPNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 204
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 205 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 253
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 254 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 301
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 302 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 342
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 43/229 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWSR----ETEIYSTVL 186
+ + +G G +G+V G VAVK+ S A E +I S L
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 106
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICL 240
+HENI+ +G+ CT + ++T Y +G L + L R L+ + L
Sbjct: 107 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
L+H +++ QG +A HRD+ ++N+L+ I DFGLA S
Sbjct: 160 ---RDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
N + + N R+ K +M+PE + DC + ++D+++ G++LWE+
Sbjct: 215 NYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 255
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 78/327 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG---EN----VAVKIFFSRDEAS---WSRETEIYSTV 185
+ I L +G+G +G+V+ H E VAVK E++ + RE E+ +
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT-- 98
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR----------------TT 229
+L+H++I+ + G R L +V Y G L L
Sbjct: 99 MLQHQHIVRFFGVCTEGRP----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-- 287
L Q++ + + G+V+L F HRD+ ++N LV I DFG+
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHF--------VHRDLATRNCLVGQGLVVKIGDFGMSR 206
Query: 288 ---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y ++ + +P R+M P ESI F + ++D+++ G+VLWE
Sbjct: 207 DIYSTDYYRVGGRTMLP-------IRWMPP----ESILYRKFTT--ESDVWSFGVVLWE- 252
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF K P++ L + + CI Q R + R + + +M
Sbjct: 253 --------IFTYGKQPWYQL-------SNTEAIDCITQGRELERPR----ACPPEVYAIM 293
Query: 405 KECWHQNANVRLSALRVKKTLIKLACA 431
+ CW + R S V L LA A
Sbjct: 294 RGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 78/327 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG---EN----VAVKIFFSRDEAS---WSRETEIYSTV 185
+ I L +G+G +G+V+ H E VAVK E++ + RE E+ +
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT-- 69
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR----------------TT 229
+L+H++I+ + G R L +V Y G L L
Sbjct: 70 MLQHQHIVRFFGVCTEGRP----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-- 287
L Q++ + + G+V+L F HRD+ ++N LV I DFG+
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHF--------VHRDLATRNCLVGQGLVVKIGDFGMSR 177
Query: 288 ---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y ++ + +P R+M P ESI F + ++D+++ G+VLWE
Sbjct: 178 DIYSTDYYRVGGRTMLP-------IRWMPP----ESILYRKFTT--ESDVWSFGVVLWE- 223
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF K P++ L + + CI Q R + R + + +M
Sbjct: 224 --------IFTYGKQPWYQL-------SNTEAIDCITQGRELERPR----ACPPEVYAIM 264
Query: 405 KECWHQNANVRLSALRVKKTLIKLACA 431
+ CW + R S V L LA A
Sbjct: 265 RGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-VAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
+ + L + +G G++GEVW ++ VAVK + + E L+H+ ++
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV- 246
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHT 251
+ + + ++++T + + GSL D L + + K+ I G+ +
Sbjct: 247 ----KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK-- 309
+ HRD+++ NILV + C IADFGLA D R G K
Sbjct: 303 RNY--------IHRDLRAANILVSASLVCKIADFGLARVIE------DNEYTAREGAKFP 348
Query: 310 -RYMSPEILDESINMDCFESFK-KADIYALGLVLWEVC 345
++ +PE ++ F SF K+D+++ G++L E+
Sbjct: 349 IKWTAPEAIN-------FGSFTIKSDVWSFGILLMEIV 379
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 43/229 (18%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEA----SWSRETEIYSTVL 186
+ + +G G +G+V G VAVK+ S A + E +I S L
Sbjct: 40 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 98
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTT---LNHHQMMKICL 240
+HENI+ +G+ CT + ++T Y +G L + L R L+ + L
Sbjct: 99 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
L+H +++ QG +A HRD+ ++N+L+ I DFGLA S
Sbjct: 152 ---RDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
N + + N R+ K +M+PE + DC + ++D+++ G++LWE+
Sbjct: 207 NYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 247
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 78/327 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG---EN----VAVKIFFSRDEAS---WSRETEIYSTV 185
+ I L +G+G +G+V+ H E VAVK E++ + RE E+ +
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT-- 75
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR----------------TT 229
+L+H++I+ + G R L +V Y G L L
Sbjct: 76 MLQHQHIVRFFGVCTEGRP----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-- 287
L Q++ + + G+V+L F HRD+ ++N LV I DFG+
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHF--------VHRDLATRNCLVGQGLVVKIGDFGMSR 183
Query: 288 ---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y ++ + +P R+M P ESI F + ++D+++ G+VLWE
Sbjct: 184 DIYSTDYYRVGGRTMLP-------IRWMPP----ESILYRKFTT--ESDVWSFGVVLWE- 229
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF K P++ L + + CI Q R + R + + +M
Sbjct: 230 --------IFTYGKQPWYQL-------SNTEAIDCITQGRELERPR----ACPPEVYAIM 270
Query: 405 KECWHQNANVRLSALRVKKTLIKLACA 431
+ CW + R S V L LA A
Sbjct: 271 RGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
T+ + KI +SIV L HLH+++ ++ HRD+K N+L+ G + DFG++
Sbjct: 149 TIPEDILGKIAVSIVKALEHLHSKL-------SVIHRDVKPSNVLINALGQVKMCDFGIS 201
Query: 289 -VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
++ +D G K YM+PE ++ +N + K+DI++LG+ + E+
Sbjct: 202 GYLVDSVAKTID------AGCKPYMAPERINPELNQKGYSV--KSDIWSLGITMIELA 251
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 115 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 170 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 90 SHPNVLSLLGICLRSEGSP---LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 146
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 147 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 195
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 196 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 243
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 244 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 284
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 89 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 146 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 194
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 195 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 242
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 243 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 283
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 37 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 94 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 150
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 151 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 199
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 200 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 247
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 248 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 87 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 144 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 192
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 193 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 240
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 241 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 281
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 81 RLLGICLTS-----TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYST-------VLLR-- 188
+ +E IG+G +G V+ G +N KI + S +R T+I ++++
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLL-DNDGKKIHCAV--KSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 189 -HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNG 245
H N+L +G + S S +V Y G L + + T N ++ L + G
Sbjct: 89 SHPNVLSLLGICLRSEGSPL---VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+ L ++ F HRD+ ++N ++ T +ADFGLA + +K + +
Sbjct: 146 MKFLASKKF--------VHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNK 194
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLV 365
G K + L ES+ F + K+D+++ G++LWE+ R PY D+
Sbjct: 195 TGAKLPVKWMAL-ESLQTQKFTT--KSDVWSFGVLLWELMTRG---------APPYPDVN 242
Query: 366 PMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
D + + + Q R +L + D + +VM +CWH A +R S
Sbjct: 243 TFDIT-------VYLLQGRRLLQPEYCPD----PLYEVMLKCWHPKAEMRPS 283
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 60/314 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKI------FFSRDEASWSRETEIYSTVL 186
K + L E +G G +G V RG W G+ V+V + S+ EA E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
L H N++ G +T + +VT GSL D L + HQ + +
Sbjct: 78 LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
+ + G+ +L ++ F HRD+ ++N+L+ T I DFGL + Q +
Sbjct: 128 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
+ + +V + +P ES+ F +D + G+ LWE +F +
Sbjct: 180 MQEHRKVPFA-WCAP----ESLKTRTFS--HASDTWMFGVTLWE---------MFTYGQE 223
Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
P+ L + + + ID++ LP + + VM +CW R + +
Sbjct: 224 PWIGL-------NGSQILHKIDKEGERLPR---PEDCPQDIYNVMVQCWAHKPEDRPTFV 273
Query: 420 RVKKTLIKLACADM 433
++ L++ DM
Sbjct: 274 ALRDFLLEAQPTDM 287
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 143 CIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGS-- 198
+G+G +G+V R A+K +E + +E+ L H+ ++ Y +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 199 -------DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHH--QMMKICLSIVNGLVHL 249
MT+ + L++ Y +LYD ++ LN + ++ I+ L ++
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN--KMDIPPNP--- 304
H++ I HRD+K NI + + I DFGLA + + + K+D P
Sbjct: 133 HSQ--------GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 305 -----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+GT Y++ E+LD + + + +K D+Y+LG++ +E+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYN-----EKIDMYSLGIIFFEMI 225
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 91 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 146 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 30/209 (14%)
Query: 144 IGKGRYGEVWRGVWHGENVAV-------KIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
IG+G + V++G+ V V + + + E E L+H NI+ +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKG--LQHPNIVRFY 91
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFG 255
S ++ + LVT + G+L +L R + ++++ C I+ GL LHT
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT-- 149
Query: 256 TQGKPAIAHRDIKSKNILVK-TNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
P I HRD+K NI + G+ I D GLA K I GT + +P
Sbjct: 150 ----PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI------GTPEFXAP 199
Query: 315 EILDESINMDCFESFKKADIYALGLVLWE 343
E +E + + D+YA G E
Sbjct: 200 EXYEEKYD-------ESVDVYAFGXCXLE 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 106 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 161 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 81 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR Y+D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEXMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L + HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--------VHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL+ +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 84 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 139 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 84 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 139 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIF-------FSRDEASWSRETEIYSTVLLR---- 188
E +G+G V R + + AVKI FS +E RE + +LR
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLV 247
H NI+ + T+ T +LV G L+D+L + TL+ + KI +++ +
Sbjct: 83 HPNIIQLKDTYETN----TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV- 306
LH K I HRD+K +NIL+ + + DFG + + P ++
Sbjct: 139 ALH--------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ---------LDPGEKLR 181
Query: 307 ---GTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
GT Y++PEI++ S+N + K+ D+++ G++++
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 84 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 139 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL ++M N VG
Sbjct: 122 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDEM---ANEFVG 168
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 169 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 200
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 83 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 88 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 143 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
NVA+K SR + + Y ++L H+NI+G + + S +++V
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
+ + + L+H +M + ++ G+ HLH+ I HRD+K NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
K++ T I DFGLA + + S M P V T+ Y +PE++ + M E+ DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
+++G+++ E+ +
Sbjct: 209 WSVGVIMGEMIK 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 78 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 133 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 60/314 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKI------FFSRDEASWSRETEIYSTVL 186
K + L E +G G +G V RG W G+ V+V + S+ EA E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
L H N++ G +T + +VT GSL D L + HQ + +
Sbjct: 78 LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 127
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
+ + G+ +L ++ F HRD+ ++N+L+ T I DFGL + Q +
Sbjct: 128 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
+ + +V + +P ES+ F +D + G+ LWE +F +
Sbjct: 180 MQEHRKVPFA-WCAP----ESLKTRTFS--HASDTWMFGVTLWE---------MFTYGQE 223
Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
P+ L + + + ID++ LP + + VM +CW R + +
Sbjct: 224 PWIGL-------NGSQILHKIDKEGERLPR---PEDCPQDIYNVMVQCWAHKPEDRPTFV 273
Query: 420 RVKKTLIKLACADM 433
++ L++ DM
Sbjct: 274 ALRDFLLEAQPTDM 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLV-THYHS-FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV H H + D T + + ++ GL H+
Sbjct: 68 DVIHTE----NKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 172 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
NVA+K SR + + Y ++L H+NI+G + + S +++V
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
+ + + L+H +M + ++ G+ HLH+ I HRD+K NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
K++ T I DFGLA + + S M P V T+ Y +PE++ + M E+ DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
+++G+++ E+ +
Sbjct: 209 WSVGVIMGEMIK 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 139 SLSECIGKGRYGEVWRGVWHGENV---AVKI--FFSRDEASWSRETEIYSTVLLRHENIL 193
+L IG+G +GEV V G + A KI +F D + +E EI + L H NI+
Sbjct: 12 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS--LDHPNII 69
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+ T ++LV + G L++ + ++ +I +++ + + H
Sbjct: 70 RL----YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH-- 123
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
K +AHRD+K +N L T+ + DFGLA + KM +VGT
Sbjct: 124 ------KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--PGKMM---RTKVGTP 172
Query: 310 RYMSPEILDESINMDCFE 327
Y+SP++L+ +C E
Sbjct: 173 YYVSPQVLEGLYGPECDE 190
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 75 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 130 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 87 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 142 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRET------EIYSTVLLRHENIL 193
+ +G G +G V +GVW GE++ + + E R++ + + L H +I+
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G + L LVT Y GSL DH+ +R L ++ + I G+ +L
Sbjct: 97 RLLG-----LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HR++ ++N+L+K+ +ADFG+A
Sbjct: 152 H--------GMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 146 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 192
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 193 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 81 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 137
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 138 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 184
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 185 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 60/314 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH---GENVAVKI------FFSRDEASWSRETEIYSTVL 186
K + L E +G G +G V RG W G+ V+V + S+ EA E+ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
L H N++ G +T + +VT GSL D L + HQ + +
Sbjct: 72 LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 121
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
+ + G+ +L ++ F HRD+ ++N+L+ T I DFGL + Q +
Sbjct: 122 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
+ + +V + +P ES+ F +D + G+ LWE +F +
Sbjct: 174 MQEHRKVPFA-WCAP----ESLKTRTFS--HASDTWMFGVTLWE---------MFTYGQE 217
Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
P+ L + + + ID++ LP + + VM +CW R + +
Sbjct: 218 PWIGL-------NGSQILHKIDKEGERLPR---PEDCPQDIYNVMVQCWAHKPEDRPTFV 267
Query: 420 RVKKTLIKLACADM 433
++ L++ DM
Sbjct: 268 ALRDFLLEAQPTDM 281
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 181 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMA---NSFVG 227
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 228 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 259
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 139 SLSECIGKGRYGEVWRGVWHGENV---AVKI--FFSRDEASWSRETEIYSTVLLRHENIL 193
+L IG+G +GEV V G + A KI +F D + +E EI + L H NI+
Sbjct: 29 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS--LDHPNII 86
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+ T ++LV + G L++ + ++ +I +++ + + H
Sbjct: 87 RL----YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH-- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGT---CVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
K +AHRD+K +N L T+ + DFGLA + KM +VGT
Sbjct: 141 ------KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--PGKMM---RTKVGTP 189
Query: 310 RYMSPEILDESINMDCFE 327
Y+SP++L+ +C E
Sbjct: 190 YYVSPQVLEGLYGPECDE 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 30/210 (14%)
Query: 142 ECIGKGRYGEVWRGV-WHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIG 197
E +G+G YG V++ G VA+K E T I LL+ H NI+ I
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI- 85
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
D+ C L + D N+T L Q+ ++ G+ H H
Sbjct: 86 -DVIHSERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH----- 138
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRYMSP 314
I HRD+K +N+L+ ++G +ADFGLA ++ IP V T Y +P
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFG-------IPVRSYTHEVVTLWYRAP 188
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
++L M + DI+++G + E+
Sbjct: 189 DVL-----MGSKKYSTSVDIWSIGCIFAEM 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
L + IG G +G + R E VAVK ++ + + EI + LRH NI+ +
Sbjct: 22 ELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+T T L +V Y S G L++ + N + + +++G+ + H
Sbjct: 82 EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGT--CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
+AHRD+K +N L+ + IADFG YS+ S + P VGT Y++
Sbjct: 135 -----QVAHRDLKLENTLLDGSPAPRLKIADFG----YSKAS-VLHSQPKSAVGTPAYIA 184
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
PE+L + K AD+++ G+ L+
Sbjct: 185 PEVL-----LKKEYDGKVADVWSCGVTLY 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRET------EIYSTVLLRHENIL 193
+ +G G +G V +GVW GE++ + + E R++ + + L H +I+
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G + L LVT Y GSL DH+ +R L ++ + I G+ +L
Sbjct: 79 RLLG-----LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HR++ ++N+L+K+ +ADFG+A
Sbjct: 134 H--------GMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHYHS--FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + S D T + + ++ GL H+
Sbjct: 72 DVIHTE----NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 126 ------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 30/210 (14%)
Query: 142 ECIGKGRYGEVWRGV-WHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIG 197
E +G+G YG V++ G VA+K E T I LL+ H NI+ I
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI- 85
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
D+ C L + D N+T L Q+ ++ G+ H H
Sbjct: 86 -DVIHSERCLTLVFEFMEKDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH----- 138
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRYMSP 314
I HRD+K +N+L+ ++G +ADFGLA ++ IP V T Y +P
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFG-------IPVRSYTHEVVTLWYRAP 188
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
++L M + DI+++G + E+
Sbjct: 189 DVL-----MGSKKYSTSVDIWSIGCIFAEM 213
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 141 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 193 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 237
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 238 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 279
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 280 NPKMRPSFLEI 290
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 68 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 172 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 173 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSF---------------GSLYDHLNRTTLNHHQMM-KICLSIVNGLV 247
+ C ++V Y +F GSL L + Q++ K+ ++++ GL
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 119 YLRE-------KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 165
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YMSPE L + ++DI+++GL L E+
Sbjct: 166 TRSYMSPERLQGT------HYSVQSDIWSMGLSLVEMA 197
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 68 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 172 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 70/301 (23%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
A +I + + IG G GEV G V +V V I + R + E I
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ- 106
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKIC--LSIV 243
H NI+ G R + +VT Y GSL D RT +M++ L V
Sbjct: 107 -FDHPNIIRLEGVVTRGRLAM----IVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGV 160
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLS 295
+ +++ HRD+ ++N+LV +N C ++DFGL+ +Y+
Sbjct: 161 GAGMRYLSDL-------GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIF 354
K+ I R+ +PE + F +F A D+++ G+V+WEV A G
Sbjct: 214 GKIPI---------RWTAPEAI-------AFRTFSSASDVWSFGVVMWEVL----AYG-- 251
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
+ PY ++ R VI ++ LP +A+ ++M +CWH++
Sbjct: 252 ---ERPYWNMT--------NRDVISSVEEGYRLP---APMGCPHALHQLMLDCWHKDRAQ 297
Query: 415 R 415
R
Sbjct: 298 R 298
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
L+ + L E +G G EV R + +VAVK+ +RD + + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
H I+ + + ++V Y +L D ++ + + +++ L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
H I HRD+K NIL+ + DFG+A + + N + +
Sbjct: 130 NFSHQN--------GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV-XQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT +Y+SP E D ++ ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + + D T + + ++ GL H+
Sbjct: 72 DVIHTE----NKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 126 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHYHS--FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + S D T + + ++ GL H+
Sbjct: 70 DVIHTE----NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 124 ------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 170
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 171 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 73 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 126
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 127 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 176
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 177 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 76 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 130 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 179
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 180 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 207
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 108
Query: 200 MTSRNSCTQL---WLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGT 256
+ + Q+ +LVTH LY L L++ + I+ GL ++H+
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMG-ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---- 163
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI
Sbjct: 164 ----NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEI 218
Query: 317 LDESINMDCFESFKKADIYALGLVLWEV 344
+ +N + K DI+++G +L E+
Sbjct: 219 M---LNSKGYT--KSIDIWSVGCILAEM 241
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 132 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 184 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 228
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 229 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 270
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 271 NPKMRPSFLEI 281
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 173 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 141 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 193 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 237
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 238 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 279
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 280 NPKMRPSFLEI 290
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 134 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 186 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 230
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 231 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 272
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 273 NPKMRPSFLEI 283
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 68 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 168
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 169 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 169
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 170 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 169
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 170 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 128 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 180 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 224
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 225 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 266
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 267 NPKMRPSFLEI 277
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 134 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 186 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 230
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 231 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 272
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 273 NPKMRPSFLEI 283
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 70 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 124 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 173
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 174 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 135 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 187 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 231
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 232 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 273
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 274 NPKMRPSFLEI 284
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 169
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 170 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 38/218 (17%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY-HSFGSLYDHLNRTTLNHHQMMKI---CLSIVNGLVHLHTE 252
T +L+LV + H L D ++ + L + I ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQ--DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTK 309
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T
Sbjct: 123 --------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTL 167
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
Y +PEIL + C DI++LG + E+ R
Sbjct: 168 WYRAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 74/313 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLR 188
++I++S +G+G +G V+ GV G VA+K + AS E + +
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVM 104
Query: 189 HE----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH--------- 233
E +++ +G + + + L+T G L +L R + ++
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
+M+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 161 KMIQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 213 TDYYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA 259
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 260 ---------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCW 299
Query: 409 HQNANVRLSALRV 421
N +R S L +
Sbjct: 300 QYNPKMRPSFLEI 312
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+ +
Sbjct: 126 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 296 NKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
R G K R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 178 XX-------RKGGKGLLPVRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 222
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 223 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLLELMRMCWQY 264
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 265 NPKMRPSFLEI 275
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 129/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+
Sbjct: 131 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 183 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 227
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 228 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 269
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 270 NPKMRPSFLEI 280
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 72 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 126 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 71 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 125 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 172 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 169
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 170 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 73 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 126
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 127 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 173
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 174 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 71 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 125 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 172 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 70 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 124 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 170
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 171 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 68 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 168
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 169 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 72 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 126 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 48/222 (21%)
Query: 142 ECIGKGRYGE-VWRGVWHGENVAVK------IFFSRDEASWSRETEIYSTVLLRHENILG 194
+ +G G G V+RG++ +VAVK F+ E RE++ H N++
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESD-------EHPNVIR 82
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL--SIVNGLVHLHTE 252
Y ++ + + L +L +++ + H + I L +GL HLH+
Sbjct: 83 YFCTEKDRQFQYIAIELCA-----ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGT-----CVIADFG----LAVSYSQLSNKMDIPPN 303
I HRD+K NIL+ +I+DFG LAV S + +P
Sbjct: 138 --------NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP-- 187
Query: 304 PRVGTKRYMSPEILDESINMDCFESFK-KADIYALGLVLWEV 344
GT+ +++PE+L E DC E+ DI++ G V + V
Sbjct: 188 ---GTEGWIAPEMLSE----DCKENPTYTVDIFSAGCVFYYV 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLS 295
+++ I +G+ +L+ F HRD+ ++N +V + T I DFG+ +
Sbjct: 135 IQMAGEIADGMAYLNANKF--------VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
Query: 296 NKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
R G K R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 187 XX-------RKGGKGLLPVRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 231
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 232 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLFELMRMCWQY 273
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 274 NPKMRPSFLEI 284
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENIL 193
L + IGKG + +V R + G VA+KI + + + + +++ V +L H NI+
Sbjct: 16 LLKTIGKGNFAKVKLARHILTGREVAIKII-DKTQLNPTSLQKLFREVRIMKILNHPNIV 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
T + L+L+ Y S G ++D+L + + IV+ + + H
Sbjct: 75 KLFEVIETEKT----LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH-- 128
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
+ I HRD+K++N+L+ + IADFG + ++ + K+D G+ Y
Sbjct: 129 ------QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDT----FCGSPPYA 177
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+ + D E D+++LG++L+
Sbjct: 178 APELF-QGKKYDGPE----VDVWSLGVILY 202
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 131/339 (38%), Gaps = 70/339 (20%)
Query: 110 LREYLDAXXXXXXXXXXXXXIQRTLAKQISLSECIGKGRYGEVWRG---VWHGENVAVKI 166
LR ++D + A IS+ + +G G +GEV G + + ++V I
Sbjct: 19 LRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 167 ------FFSRDEASWSRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGS 220
+ + + E I H NI+ G S+ + +VT GS
Sbjct: 79 KTLKVGYTEKQRRDFLGEASIMGQ--FDHPNIIRLEGVVTKSK----PVMIVTEXMENGS 132
Query: 221 LYDHLNR--TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
L L + Q++ + I +G+ +L HRD+ ++NIL+ +N
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM--------GAVHRDLAARNILINSNL 184
Query: 279 TCVIADFGLA--------VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFK 330
C ++DFGL+ +Y+ K+ I R+ SPE + + F
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPI---------RWTSPEAI-------AYRKFT 228
Query: 331 KA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPN 389
A D+++ G+VLWEV + PY ++ D + +D+ + P
Sbjct: 229 SASDVWSYGIVLWEVMSYG---------ERPYWEMSNQD-------VIKAVDEGYRLPPP 272
Query: 390 RWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKTLIKL 428
A+ ++M +CW ++ N R ++ L KL
Sbjct: 273 M----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 45/233 (19%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWSR----ETEIYSTVL 186
+ + +G G +G+V G VAVK+ S A E +I S L
Sbjct: 48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 106
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-------TLNHHQMM 236
+HENI+ +G+ CT + ++T Y +G L + L R + N
Sbjct: 107 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSY 291
+ LS + L+H +++ QG +A HRD+ ++N+L+ I DFGLA
Sbjct: 160 EEQLSSRD-LLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 216
Query: 292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SN + + N R+ K +M+PE + DC + ++D+++ G++LWE+
Sbjct: 217 MNDSNYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLWEI 261
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 70 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 124 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 170
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 171 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH---GENVAVKI------FFSRDEASWSRETEIYSTVL 186
K + L E +G G +G V RG W G+ V+V + S+ EA E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
L H N++ G +T + +VT GSL D L + HQ + +
Sbjct: 68 LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 117
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
+ + G+ +L ++ F HRD+ ++N+L+ T I DFGL + Q +
Sbjct: 118 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ + +V + +P ES+ F +D + G+ LWE+
Sbjct: 170 MQEHRKVPFA-WCAP----ESLKTRTFSH--ASDTWMFGVTLWEM 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 138 ISLSECIGKGRYGEVWRG--VWHGEN---VAVKIFFSRDEASWSRETEIYSTVL--LRHE 190
+ + + IG G +GEV G G+ VA+K S R+ ++++ H
Sbjct: 9 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 68
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVH 248
N++ G S T + ++T + GSL L N Q++ + I G+ +
Sbjct: 69 NVIHLEGVVTKS----TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 124
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
L + HR + ++NILV +N C ++DFGL+ + D +G
Sbjct: 125 LADMNY--------VHRALAARNILVNSNLVCKVSDFGLSRFLE--DDTSDPTYTSALGG 174
Query: 309 K---RYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
K R+ +PE + + F A D+++ G+V+WEV + PY D+
Sbjct: 175 KIPIRWTAPEAIQ-------YRKFTSASDVWSYGIVMWEVMSYG---------ERPYWDM 218
Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSALRVKKT 424
D VI +Q LP S L+ ++M +CW ++ N R ++ T
Sbjct: 219 TNQD--------VINAIEQDYRLPPPMDCPSALH---QLMLDCWQKDRNHRPKFGQIVNT 267
Query: 425 LIKL 428
L K+
Sbjct: 268 LDKM 271
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 140 LSECIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHENIL 193
L + IGKG + +V R + G VA+KI + + + + +++ V +L H NI+
Sbjct: 19 LLKTIGKGNFAKVKLARHILTGREVAIKII-DKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
T + L+L+ Y S G ++D+L + + IV+ + + H
Sbjct: 78 KLFEVIETEKT----LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH-- 131
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
+ I HRD+K++N+L+ + IADFG + ++ + K+D G Y
Sbjct: 132 ------QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLD----AFCGAPPYA 180
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+ + D E D+++LG++L+
Sbjct: 181 APELF-QGKKYDGPE----VDVWSLGVILY 205
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 32/212 (15%)
Query: 142 ECIGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYS--TVLLRHENILGYIG 197
+ IGKG +G+V E V AVK+ + E I S VLL++ +G
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGT 256
S + +L+ V Y + G L+ HL R + I + L +LH+
Sbjct: 104 LHF-SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---- 158
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRYM 312
I +RD+K +NIL+ + G V+ DFGL K +I N GT Y+
Sbjct: 159 ----NIVYRDLKPENILLDSQGHIVLTDFGLC--------KENIEHNSTTSTFCGTPEYL 206
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PE+L + + D + LG VL+E+
Sbjct: 207 APEVLHKQ------PYDRTVDWWCLGAVLYEM 232
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 144 IGKG--RYGEVWRGVWHGENVAVKIFF---SRDEASWSRETEIYSTVLLRHENILGYIGS 198
+G+G Y ++ G+ G A+K +D RE +++ L H NIL +
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHR--LFNHPNILRLVAY 94
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-----LNHHQMMKICLSIVNGLVHLHTEI 253
+ R + + WL+ + G+L++ + R L Q++ + L I GL +H +
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFG------LAVSYSQLSNKMDIPPNPRVG 307
+ AHRD+K NIL+ G V+ D G + V S+ + + R
Sbjct: 155 Y--------AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC- 205
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
T Y +PE+ S+ C ++ D+++LG VL+
Sbjct: 206 TISYRAPELF--SVQSHCVID-ERTDVWSLGCVLY 237
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 173 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 70/311 (22%)
Query: 138 ISLSECIGKGRYGEVWRGVWH--GEN---VAVKI----FFSRDEASWSRETEIYSTVLLR 188
I++ IG G +GEV G G+ VA+K + + + E I
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQ--FD 81
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGL 246
H NI+ G S+ + +VT Y GSL L N Q++ + I G+
Sbjct: 82 HPNIIHLEGVVTKSK----PVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNKM 298
+L + HRD+ ++NIL+ +N C ++DFGL+ +Y+ K+
Sbjct: 138 KYLSDMGY--------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 189
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEY 357
I R+ +PE + F F A D+++ G+V+WEV
Sbjct: 190 PI---------RWTAPEAI-------AFRKFTSASDVWSYGIVMWEVVSYG--------- 224
Query: 358 KAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
+ PY ++ D VI ++ LP+ + A+ ++M +CW + N R
Sbjct: 225 ERPYWEMTNQD--------VIKAVEEGYRLPSPMDCPA---ALYQLMLDCWQKERNSRPK 273
Query: 418 ALRVKKTLIKL 428
+ L KL
Sbjct: 274 FDEIVNMLDKL 284
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 59/237 (24%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR--------DEASWSRETEIYSTVLLRH 189
I + IG+G +G+V + + + + R D ++ E E+ L H
Sbjct: 17 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGHH 75
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-----------------T 229
NI+ +G+ C L+L Y G+L D L ++ T
Sbjct: 76 PNIINLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+ Q++ + G+ +L + F HRD+ ++NILV N IADFG
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQF--------IHRDLAARNILVGENYVAKIADFG--- 177
Query: 290 SYSQLSNKMDIPPNPRVG--TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
LS ++ +G R+M+ E L+ S+ +D+++ G++LWE+
Sbjct: 178 ----LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT------TNSDVWSYGVLLWEI 224
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 59/237 (24%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR--------DEASWSRETEIYSTVLLRH 189
I + IG+G +G+V + + + + R D ++ E E+ L H
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGHH 85
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-----------------T 229
NI+ +G+ C L+L Y G+L D L ++ T
Sbjct: 86 PNIINLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+ Q++ + G+ +L + F HRD+ ++NILV N IADFG
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQF--------IHRDLAARNILVGENYVAKIADFG--- 187
Query: 290 SYSQLSNKMDIPPNPRVG--TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
LS ++ +G R+M+ E L+ S+ +D+++ G++LWE+
Sbjct: 188 ----LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT------TNSDVWSYGVLLWEI 234
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 70 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 123
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 124 ------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 170
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 171 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 71 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 125 ------RVLHRDLKPENLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 172 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 202
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 82 RLLGICLTS-----TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 137 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 115/277 (41%), Gaps = 53/277 (19%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
+ +GKG++G V+ R + +A+K+ F E RE EI S LRH
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH--LRH 73
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVH 248
NIL + +++L+ + G LY L + + + + + L +
Sbjct: 74 PNILRMY----NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 129
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
H + HRDIK +N+L+ G IADFG +V L + GT
Sbjct: 130 CHER--------KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------MCGT 175
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
Y+ PE+++ + + K D++ G++ +E + +P H
Sbjct: 176 LDYLPPEMIEGKTHDE------KVDLWCAGVLCYEFLVGMPP------FDSPSHT----- 218
Query: 369 PSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
+ R+++ +D + P ++SD + + ++K+++
Sbjct: 219 ---ETHRRIVNVDLKFPP----FLSDGSKDLISKLLR 248
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 136 KQISLSECIGKGRYGEVWRGVWH---GENVAVKI------FFSRDEASWSRETEIYSTVL 186
K + L E +G G +G V RG W G+ V+V + S+ EA E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
L H N++ G +T + +VT GSL D L + HQ + +
Sbjct: 68 LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 117
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
+ + G+ +L ++ F HRD+ ++N+L+ T I DFGL + Q +
Sbjct: 118 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ + +V + +P ES+ F +D + G+ LWE+
Sbjct: 170 MQEHRKVPFA-WCAP----ESLKTRTFSH--ASDTWMFGVTLWEM 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 51/236 (21%)
Query: 132 RTLAKQISLS-----ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEI 181
R AK+I S + IG G +GEV G VA+K + R+
Sbjct: 20 REFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS 79
Query: 182 YSTVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMK 237
++++ H NI+ G C + ++T Y GSL L N Q++
Sbjct: 80 EASIMGQFDHPNIIHLEGV----VTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 135
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------V 289
+ I +G+ +L + HRD+ ++NILV +N C ++DFG++
Sbjct: 136 MLRGIGSGMKYLSDM--------SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 187
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
+Y+ K+ I R+ +PE + + F A D+++ G+V+WEV
Sbjct: 188 AYTTRGGKIPI---------RWTAPEAI-------AYRKFTSASDVWSYGIVMWEV 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 116/283 (40%), Gaps = 65/283 (22%)
Query: 138 ISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
+ +GKG++G V+ R + +A+K+ F E RE EI S LRH
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH--LRH 74
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVH 248
NIL + +++L+ + G LY L + + + + + L +
Sbjct: 75 PNILRMY----NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 130
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
H + HRDIK +N+L+ G IADFG +V L + GT
Sbjct: 131 CHER--------KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------MCGT 176
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMD 368
Y+ PE+++ + + K D++ G++ +E LV M
Sbjct: 177 LDYLPPEMIEGKTHDE------KVDLWCAGVLCYEF-------------------LVGM- 210
Query: 369 PSFDD------MRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
P FD R+++ +D + P ++SD + + ++K+++
Sbjct: 211 PPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLR 249
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 132/316 (41%), Gaps = 73/316 (23%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEASWSRETEIYS----T 184
+ + + +G G +G+V +G + VAVK+ + ++S RE + T
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS-EREALMSELKMMT 103
Query: 185 VLLRHENILGYIGSDMTSRNSCT---QLWLVTHYHSFGSLYDHL---------------N 226
L HENI+ +G+ CT ++L+ Y +G L ++L N
Sbjct: 104 QLGSHENIVNLLGA-------CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 227 RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ--GKPAIAHRDIKSKNILVKTNGTCVIAD 284
+ L + + + L+ + L + G + + HRD+ ++N+LV I D
Sbjct: 157 QKRLEEEEDLNV-LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICD 215
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
FGLA SN + + N R+ K +M+PE L E I K+D+++ G++LWE
Sbjct: 216 FGLARDIMSDSNYV-VRGNARLPVK-WMAPESLFEGIYT------IKSDVWSYGILLWE- 266
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTK-- 402
IF PY +P+D +F ++ N + D A +
Sbjct: 267 --------IFSLGVNPYPG-IPVDANF------------YKLIQNGFKMDQPFYATEEIY 305
Query: 403 -VMKECWHQNANVRLS 417
+M+ CW ++ R S
Sbjct: 306 IIMQSCWAFDSRKRPS 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
NVA+K SR + + Y ++L H+NI+G + + S +++V
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
+ + + L+H +M + ++ G+ HLH+ I HRD+K NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
K++ T I DFGLA + + S M P V T+ Y +PE++ + M E+ DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
+++G ++ E+ +
Sbjct: 209 WSVGCIMGEMIK 220
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 126/314 (40%), Gaps = 70/314 (22%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
A IS+ + +G G +GEV G + + ++V I + + + E I
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ- 73
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIV 243
H NI+ G S+ + +VT GSL L + Q++ + I
Sbjct: 74 -FDHPNIIRLEGVVTKSK----PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLS 295
+G+ +L + HRD+ ++NIL+ +N C ++DFGL+ +Y+
Sbjct: 129 SGMKYLSDMGY--------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 296 NKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIF 354
K+ I R+ SPE + + F A D+++ G+VLWEV
Sbjct: 181 GKIPI---------RWTSPEAI-------AYRKFTSASDVWSYGIVLWEV---------M 215
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANV 414
+ PY ++ D + +D+ + P A+ ++M +CW ++ N
Sbjct: 216 SYGERPYWEMSNQD-------VIKAVDEGYRLPPPM----DCPAALYQLMLDCWQKDRNN 264
Query: 415 RLSALRVKKTLIKL 428
R ++ L KL
Sbjct: 265 RPKFEQIVSILDKL 278
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
L+ + L E +G G EV R + +VAVK+ +RD + + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
H I+ + + ++V Y +L D ++ + + +++ L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
H I HRD+K NI++ + DFG+A + + N + +
Sbjct: 130 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT +Y+SP E D ++ ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 114/271 (42%), Gaps = 53/271 (19%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRHENILGY 195
+GKG++G V+ R + +A+K+ F E RE EI S LRH NIL
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH--LRHPNILRM 79
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSIVNGLVHLHTEIF 254
+ +++L+ + G LY L + + + + + L + H
Sbjct: 80 Y----NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER-- 133
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRDIK +N+L+ G IADFG +V L + GT Y+ P
Sbjct: 134 ------KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX------MCGTLDYLPP 181
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDM 374
E+++ + + K D++ G++ +E + +P H +
Sbjct: 182 EMIEGKTHDE------KVDLWCAGVLCYEFLVGMPP------FDSPSHT--------ETH 221
Query: 375 RKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
R+++ +D + P ++SD + + ++K+++
Sbjct: 222 RRIVNVDLKFPP----FLSDGSKDLISKLLR 248
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKI------FFSRDEASWSRETEIYSTVL 186
K + L E +G G +G V RG W G+ V+V + S+ EA E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
L H N++ G +T + +VT GSL D L + HQ + +
Sbjct: 68 LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 117
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
+ + G+ +L ++ F HRD+ ++N+L+ T I DFGL + Q +
Sbjct: 118 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ + +V + +P ES+ F +D + G+ LWE+
Sbjct: 170 MQEHRKVPFA-WCAP----ESLKTRTFSH--ASDTWMFGVTLWEM 207
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 72 DVIHTE----NKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 125
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKRY 311
+ HRD+K +N+L+ T G +ADFGLA ++ +P V T Y
Sbjct: 126 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFG-------VPVRTYXHEVVTLWY 172
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
+PEIL + C DI++LG + E+ R
Sbjct: 173 RAPEIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 203
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 85 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 140 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 81 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
L+ + L E +G G EV R + +VAVK+ +RD + + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
H I+ + + ++V Y +L D ++ + + +++ L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
H I HRD+K NI++ + DFG+A + + N + +
Sbjct: 130 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT +Y+SP E D ++ ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 51/223 (22%)
Query: 142 ECIGKGRYGEVWRGVW--HGENV----AVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
+ +G G +G V++G+W GE V A+KI + +A+ E + H +++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
+G ++ + LVT G L Y H ++ + ++ C+ I G+++L
Sbjct: 104 RLLGVCLSP-----TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 158
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-------VSYSQLSNKMDIPPNP 304
+ HRD+ ++N+LVK+ I DFGLA Y+ KM I
Sbjct: 159 R--------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI---- 206
Query: 305 RVGTKRYMSPEILDESINMDCFESFK---KADIYALGLVLWEV 344
++M+ ++C K ++D+++ G+ +WE+
Sbjct: 207 -----KWMA---------LECIHYRKFTHQSDVWSYGVTIWEL 235
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 128/311 (41%), Gaps = 70/311 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++I++S +G+G +G V+ GV G V I + AS E + + E
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 191 ----NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN--RTTLNHH---------QM 235
+++ +G + + + L+T G L +L R + ++ +M
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTR----GDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 236 MKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-----VS 290
+++ I +G+ +L+ F HRD+ ++N V + T I DFG+
Sbjct: 128 IQMAGEIADGMAYLNANKF--------VHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKA 350
Y + K +P R+MSPE L + + F ++ +D+++ G+VLWE+
Sbjct: 180 YYRKGGKGLLP-------VRWMSPESLKDGV----FTTY--SDVWSFGVVLWEIATLA-- 224
Query: 351 NGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQ 410
+ PY L +V+ + +L D+ + + ++M+ CW
Sbjct: 225 -------EQPYQGL--------SNEQVLRFVMEGGLLDK---PDNCPDMLLELMRMCWQY 266
Query: 411 NANVRLSALRV 421
N +R S L +
Sbjct: 267 NPKMRPSFLEI 277
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 52/233 (22%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG-- 197
E IG G +G+V++ G+ ++ +E + E E+ + L H NI+ Y G
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA---EREVKALAKLDHVNIVHYNGCW 74
Query: 198 -----------------------SDMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLN 231
S +SR+ L++ + G+L + + L+
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 232 HHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY 291
+++ I G+ ++H++ + HRD+K NI + I DFGL S
Sbjct: 135 KVLALELFEQITKGVDYIHSK--------KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 292 SQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K D GT RYMSPE + + K+ D+YALGL+L E+
Sbjct: 187 -----KNDGKRTRSKGTLRYMSPE------QISSQDYGKEVDLYALGLILAEL 228
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 136 KQISLSECIGKGRYGEVWRGVW---HGENVAVKI------FFSRDEASWSRETEIYSTVL 186
K + L E +G G +G V RG W G+ V+V + S+ EA E+ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ-------MMKIC 239
L H N++ G +T + +VT GSL D L + HQ + +
Sbjct: 72 LDHRNLIRLYGVVLTP-----PMKMVTELAPLGSLLDRLRK-----HQGHFLLGTLSRYA 121
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
+ + G+ +L ++ F HRD+ ++N+L+ T I DFGL + Q +
Sbjct: 122 VQVAEGMGYLESKRF--------IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ + +V + +P ES+ F +D + G+ LWE+
Sbjct: 174 MQEHRKVPFA-WCAP----ESLKTRTFS--HASDTWMFGVTLWEM 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 51/236 (21%)
Query: 132 RTLAKQISLS-----ECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEI 181
R AK+I S + IG G +GEV G VA+K + R+
Sbjct: 5 REFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS 64
Query: 182 YSTVL--LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMK 237
++++ H NI+ G C + ++T Y GSL L N Q++
Sbjct: 65 EASIMGQFDHPNIIHLEGV----VTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG 120
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------V 289
+ I +G+ +L + HRD+ ++NILV +N C ++DFG++
Sbjct: 121 MLRGIGSGMKYLSDMSY--------VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
+Y+ K+ I R+ +PE + + F A D+++ G+V+WEV
Sbjct: 173 AYTTRGGKIPI---------RWTAPEAI-------AYRKFTSASDVWSYGIVMWEV 212
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 116 LDHERMSYLLYQMLXGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 168 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 83 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
NVA+K SR + + Y ++L H+NI+G + + S +++V
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
+ + + L+H +M + ++ G+ HLH+ I HRD+K NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
K++ T I DFGLA + + S M P V T+ Y +PE++ + M E+ DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
+++G ++ E+ +
Sbjct: 209 WSVGCIMGEMIK 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 84 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 139 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 82 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 137 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 123 LDHERMSYLLYQMLXGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
NVA+K SR + + Y ++L H+NI+G + + S +++V
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
+ + + L+H +M + ++ G+ HLH+ I HRD+K NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
K++ T I DFGLA + + S M P V T+ Y +PE++ + M E+ DI
Sbjct: 160 KSDATLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
+++G ++ E+ +
Sbjct: 209 WSVGCIMGEMIK 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++S + +G G +G+V +G VAVK+ + RE L+
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-ERE------ALMSE 76
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
+L Y+G+ M N +CT ++T Y +G L + L R + + I
Sbjct: 77 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 136
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
L F Q +A HRD+ ++NIL+ I DFGLA
Sbjct: 137 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
SN + + N R+ K +M+PE + +C +F ++D+++ G+ LWE
Sbjct: 197 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 239
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
+F +PY + P+D F M K + R + P ++ M +MK CW
Sbjct: 240 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 285
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 36/224 (16%)
Query: 143 CIGKGRYGEV--WRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
+G+G +G+V R A+K +E + +E+ L H+ ++ Y + +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 201 TSRN---------SCTQLWLVTHYHSFGSLYDHLNRTTLNHH--QMMKICLSIVNGLVHL 249
RN + L++ Y +LYD ++ LN + ++ I+ L ++
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN--KMDIPPNP--- 304
H++ I HR++K NI + + I DFGLA + + + K+D P
Sbjct: 133 HSQ--------GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 305 -----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE 343
+GT Y++ E+LD + + + +K D Y+LG++ +E
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYN-----EKIDXYSLGIIFFE 223
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENIL 193
L + +G G +G+V G G VAVKI + S EI + L RH +I+
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTE 252
T + +++V Y S G L+D++ + L+ + ++ I++G+ + H
Sbjct: 80 KLYQVISTP----SDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--GTKR 310
+ + HRD+K +N+L+ + IADFG LSN M R G+
Sbjct: 136 M--------VVHRDLKPENVLLDAHMNAKIADFG-------LSNMMSDGEFLRXSCGSPN 180
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y +PE++ + + + DI++ G++L+
Sbjct: 181 YAAPEVISGRLY-----AGPEVDIWSSGVILY 207
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
L+ + L E +G G EV R + +VAVK+ +RD + + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
H I+ + + ++V Y +L D ++ + + +++ L
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
H I HRD+K NI++ + DFG+A + + N + +
Sbjct: 130 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT +Y+SP E D ++ ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 51/223 (22%)
Query: 142 ECIGKGRYGEVWRGVW--HGENV----AVKIF--FSRDEASWSRETEIYSTVLLRHENIL 193
+ +G G +G V++G+W GE V A+KI + +A+ E + H +++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSL--YDHLNRTTLNHHQMMKICLSIVNGLVHLHT 251
+G ++ + LVT G L Y H ++ + ++ C+ I G+++L
Sbjct: 81 RLLGVCLSP-----TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA-------VSYSQLSNKMDIPPNP 304
+ HRD+ ++N+LVK+ I DFGLA Y+ KM I
Sbjct: 136 R--------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI---- 183
Query: 305 RVGTKRYMSPEILDESINMDCFESFK---KADIYALGLVLWEV 344
++M+ ++C K ++D+++ G+ +WE+
Sbjct: 184 -----KWMA---------LECIHYRKFTHQSDVWSYGVTIWEL 212
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 81 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFG A
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 164
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ + G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 81 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 136 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 83 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFG A
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 166
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 88 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFG A
Sbjct: 143 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 171
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 46/228 (20%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYSTVL--L 187
A I + + IG G +GEV G VA+K + R+ ++++
Sbjct: 7 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQF 66
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNG 245
H NI+ G C + ++T Y GSL L N Q++ + I +G
Sbjct: 67 DHPNIIHLEGV----VTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNK 297
+ +L + HRD+ ++NILV +N C ++DFG++ +Y+ K
Sbjct: 123 MKYLSDMSY--------VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 298 MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
+ I R+ +PE + + F A D+++ G+V+WEV
Sbjct: 175 IPI---------RWTAPEAI-------AYRKFTSASDVWSYGIVMWEV 206
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 229 TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
T+ + KI +SIV L HLH+++ ++ HRD+K N+L+ G DFG++
Sbjct: 132 TIPEDILGKIAVSIVKALEHLHSKL-------SVIHRDVKPSNVLINALGQVKXCDFGIS 184
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
D+ + G K Y +PE ++ +N + K+DI++LG+ E+
Sbjct: 185 GYLVD-----DVAKDIDAGCKPYXAPERINPELNQKGYSV--KSDIWSLGITXIELA 234
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ + G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+T FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 88 RLLGICLTS-----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 143 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
++I+L +G+G +G V+ G + GE VAVK R+ + E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
H ++ +G + + + L+ H G L +L R
Sbjct: 77 FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
+M+++ I +G+ +L+ + F HRD+ ++N +V + T I DFG+ +
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 294 LSNKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
R G K R+M+PE L + + F + +D+++ G+VLWE+
Sbjct: 183 TDXX-------RKGGKGLLPVRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
+ PY L S + + K + +DQ D+ +T +M
Sbjct: 230 EQ---------PYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
+ CW N N+R + L + L
Sbjct: 266 RMCWQFNPNMRPTFLEIVNLL 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
L+ + L E +G G EV R + +VAVK+ +RD + + R E + L
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
H I+ + + ++V Y +L D ++ + + +++ L
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
H I HRD+K NI++ + DFG+A + + N + +
Sbjct: 147 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 197
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT +Y+SP E D ++ ++D+Y+LG VL+EV
Sbjct: 198 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 229
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++S + +G G +G+V +G VAVK+ + RE L+
Sbjct: 42 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREA------LMSE 94
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
+L Y+G+ M N +CT ++T Y +G L + L R + + I
Sbjct: 95 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 154
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
L F Q +A HRD+ ++NIL+ I DFGLA
Sbjct: 155 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
SN + + N R+ K +M+PE + +C +F ++D+++ G+ LWE
Sbjct: 215 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 257
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
+F +PY + P+D F M K + R + P ++ M +MK CW
Sbjct: 258 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 303
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++S + +G G +G+V +G VAVK+ + RE L+
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREA------LMSE 92
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
+L Y+G+ M N +CT ++T Y +G L + L R + + I
Sbjct: 93 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 152
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
L F Q +A HRD+ ++NIL+ I DFGLA
Sbjct: 153 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 212
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
SN + + N R+ K +M+PE + +C +F ++D+++ G+ LWE
Sbjct: 213 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 255
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
+F +PY + P+D F M K + R + P ++ M +MK CW
Sbjct: 256 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 301
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 56/242 (23%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN-------VAVKIFFSRDEA----SWSRETEIYSTVL 186
+ + +G G +G+V G VAVK+ S A + E +I S L
Sbjct: 33 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH-L 91
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI- 242
+HENI+ +G+ CT + ++T Y +G L + L R M+ L+
Sbjct: 92 GQHENIVNLLGA-------CTHGGPVLVITEYCCYGDLLNFLRRKA---EAMLGPSLAPG 141
Query: 243 ---------------VNGLVHLHTEIFGTQGKPAIA-----HRDIKSKNILVKTNGTCVI 282
+ L+H +++ QG +A HRD+ ++N+L+ I
Sbjct: 142 QDPEGLDKEDGRPLELRDLLHFSSQV--AQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 199
Query: 283 ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
DFGLA SN + + N R+ K +M+PE + DC + ++D+++ G++LW
Sbjct: 200 GDFGLARDIMNDSNYI-VKGNARLPVK-WMAPESI-----FDCVYTV-QSDVWSYGILLW 251
Query: 343 EV 344
E+
Sbjct: 252 EI 253
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 49/227 (21%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGEN------VAVKI----FFSRDEASWSRETEIYSTVLL 187
++ + IG G +GEV++G+ + VA+K + + + E I
Sbjct: 46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ--F 103
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT--TLNHHQMMKICLSIVNG 245
H NI+ G + + ++T Y G+L L + Q++ + I G
Sbjct: 104 SHHNIIRLEGVI----SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNK 297
+ +L + HRD+ ++NILV +N C ++DFGL+ +Y+ K
Sbjct: 160 MKYLANMNY--------VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 298 MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ I R+ +P E+I+ F S +D+++ G+V+WEV
Sbjct: 212 IPI---------RWTAP----EAISYRKFTS--ASDVWSFGIVMWEV 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 131 QRTLAKQ-ISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSRETEIYSTVL 186
Q +A++ + L+ +G+G +GEV+ GV+ GE + V + + + + + + S +
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 187 ----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
L H +I+ IG W++ + +G L +L N+ +L ++ L
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV------SYSQL 294
I + +L + HRDI +NILV + + DFGL+ Y
Sbjct: 117 QICKAMAYLES--------INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
++ I ++MSP ESIN F + +D++ + +WE+
Sbjct: 169 VTRLPI---------KWMSP----ESINFRRFTT--ASDVWMFAVCMWEI 203
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++S + +G G +G+V +G VAVK+ + RE L+
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREA------LMSE 99
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
+L Y+G+ M N +CT ++T Y +G L + L R + + I
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
L F Q +A HRD+ ++NIL+ I DFGLA
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
SN + + N R+ K +M+PE + +C +F ++D+++ G+ LWE
Sbjct: 220 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 262
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
+F +PY + P+D F M K + R + P ++ M +MK CW
Sbjct: 263 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 308
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+ E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 173 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 200
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+ E T I LL+ H NI+ +
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 68 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 121
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 122 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + C DI++LG + E+ R
Sbjct: 172 EIL-----LGCKYYSTAVDIWSLGCIFAEMVTR 199
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 22/218 (10%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVKIF---FSRDEASWSR-ETEIYSTVLL 187
L+ + L E +G G EV R + +VAVK+ +RD + + R E + L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 188 RHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGL 246
H I+ + + ++V Y +L D ++ + + +++ L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
H I HRD+K NI++ + DFG+A + + N + +
Sbjct: 130 NFSHQN--------GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-TQTAAVI 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT +Y+SP E D ++ ++D+Y+LG VL+EV
Sbjct: 181 GTAQYLSP----EQARGDSVDA--RSDVYSLGCVLYEV 212
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
Query: 140 LSECIGKGRYGEVWRGVWHGENVAVKIFF----------SRDEASWSRETEIYSTVLLRH 189
+ + +G+G YG+V + V E + + EA+ +E ++ LRH
Sbjct: 9 MGDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR--LRH 65
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFG--SLYDHLNRTTLNHHQMMKICLSIVNGLV 247
+N++ + D+ ++++V Y G + D + Q +++GL
Sbjct: 66 KNVIQLV--DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+LH++ I H+DIK N+L+ T GT I+ G+A + + D G
Sbjct: 124 YLHSQ--------GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA--ADDTCRTSQG 173
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ + PEI + +D F F K DI++ G+ L+ +
Sbjct: 174 SPAFQPPEIAN---GLDTFSGF-KVDIWSAGVTLYNI 206
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 131 QRTLAKQ-ISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSRETEIYSTVL 186
Q +A++ + L+ +G+G +GEV+ GV+ GE + V + + + + + + S +
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 187 ----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
L H +I+ IG W++ + +G L +L N+ +L ++ L
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 132
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV------SYSQL 294
I + +L + HRDI +NILV + + DFGL+ Y
Sbjct: 133 QICKAMAYLES--------INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
++ I ++MSP ESIN F + +D++ + +WE+
Sbjct: 185 VTRLPI---------KWMSP----ESINFRRFTT--ASDVWMFAVCMWEI 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 33/196 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + + S M+ P V T+ Y +PE++ + M E+
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMME----PEVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWE-VCRR 347
DI+++G ++ E VC +
Sbjct: 207 DIWSVGCIMGEMVCHK 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 121 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ S +N M P V T+ Y +PE++ + M E+ DI+++G ++ E+ +
Sbjct: 173 TAS--TNFM---MTPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGELVK 218
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 44/230 (19%)
Query: 131 QRTLAKQ-ISLSECIGKGRYGEVWRGVW---HGENVAVKIFFSRDEASWSRETEIYSTVL 186
Q +A++ + L+ +G+G +GEV+ GV+ GE + V + + + + + + S +
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 187 ----LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICL 240
L H +I+ IG W++ + +G L +L N+ +L ++ L
Sbjct: 66 IMKNLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV------SYSQL 294
I + +L + HRDI +NILV + + DFGL+ Y
Sbjct: 121 QICKAMAYLES--------INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
++ I ++MSP ESIN F + +D++ + +WE+
Sbjct: 173 VTRLPI---------KWMSP----ESINFRRFTT--ASDVWMFAVCMWEI 207
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 120/293 (40%), Gaps = 54/293 (18%)
Query: 135 AKQISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTV 185
A +I + + IG G GEV G V +V V I + R + E I
Sbjct: 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQ- 106
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKIC--LSIV 243
H NI+ G R + +VT Y GSL D RT +M++ L V
Sbjct: 107 -FDHPNIIRLEGVVTRGRLAM----IVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGV 160
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
+ +++ HRD+ ++N+LV +N C ++DFGL+ +
Sbjct: 161 GAGMRYLSDL-------GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFEEYKAPYH 362
++ R+ +PE + F +F A D+++ G+V+WEV A G + PY
Sbjct: 214 GKIPI-RWTAPEAI-------AFRTFSSASDVWSFGVVMWEVL----AYG-----ERPYW 256
Query: 363 DLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
++ R VI ++ LP +A+ ++M +CWH++ R
Sbjct: 257 NMT--------NRDVISSVEEGYRLP---APMGCPHALHQLMLDCWHKDRAQR 298
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 54/286 (18%)
Query: 143 CIGKGRYGEVWRGVW--HGEN---VAVKIFFSRDEASWSRETEIYSTVLLR---HENILG 194
IGKG +G V+ G + +N A+K SR E + +L+R H N+L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH--HQMMKICLSIVNGLVHLHTE 252
IG M + L Y G L + N ++ L + G+ +L +
Sbjct: 87 LIGI-MLPPEGLPHVLLP--YMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
F HRD+ ++N ++ + T +ADFGLA DI +++
Sbjct: 144 KF--------VHRDLAARNCMLDESFTVKVADFGLA---------RDILDREYYSVQQHR 186
Query: 313 SPEILDESINMDCFESFK---KADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDP 369
+ + ++ ++++ K+D+++ G++LWE+ R PY + P D
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG---------APPYRHIDPFDL 237
Query: 370 SFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
+ + Q R + + DS + +VM++CW + VR
Sbjct: 238 TH-------FLAQGRRLPQPEYCPDS----LYQVMQQCWEADPAVR 272
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 71/307 (23%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+++L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++ + FG+L +L R+ N K
Sbjct: 82 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKD 139
Query: 243 VNGLVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 140 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA-------- 191
Query: 297 KMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 192 -RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE----- 238
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
IF +PY V +D F R++ + R D T M + M +CW
Sbjct: 239 ----IFSLGASPYPG-VKIDEEF--XRRLKEGTRMR-------APDYTTPEMYQTMLDCW 284
Query: 409 HQNANVR 415
H + R
Sbjct: 285 HGEPSQR 291
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 144 IGKGRYG--EVWRGVWHGEN----VAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYI 196
+GKG +G E+ R G+N VAVK + S + + EI L + I+ Y
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
G ++ +L LV Y G L D L +R L+ +++ I G+ +L
Sbjct: 75 G--VSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL----- 127
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
G HRD+ ++NILV++ IADFGLA L + P + +P
Sbjct: 128 ---GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
E L ++I +++D+++ G+VL+E+
Sbjct: 184 ESLSDNIFS------RQSDVWSFGVVLYEL 207
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 57/236 (24%)
Query: 138 ISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR--------DEASWSRETEIYSTVLLRH 189
I + IG+G +G+V + + + + R D ++ E E+ L H
Sbjct: 24 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK-LGHH 82
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNRT-----------------T 229
NI+ +G+ C L+L Y G+L D L ++ T
Sbjct: 83 PNIINLLGA-------CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+ Q++ + G+ +L + F HR++ ++NILV N IADFGL+
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQF--------IHRNLAARNILVGENYVAKIADFGLSR 187
Query: 290 SYSQLSNK-MDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
K M P R+M+ E L+ S+ +D+++ G++LWE+
Sbjct: 188 GQEVYVKKTMGRLP------VRWMAIESLNYSVYT------TNSDVWSYGVLLWEI 231
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 121/296 (40%), Gaps = 58/296 (19%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++S + +G G +G+V +G VAVK+ + RE L+
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT-EREA------LMSE 99
Query: 190 ENILGYIGSDMTSRN---SCT---QLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICL 240
+L Y+G+ M N +CT ++T Y +G L + L R + + I
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 241 SIVNGLVHLHTEIFGTQGKPAIA--------HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
L F Q +A HRD+ ++NIL+ I DFGLA
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANG 352
SN + + N R+ K +M+PE + +C +F ++D+++ G+ LWE
Sbjct: 220 NDSNYV-VKGNARLPVK-WMAPESI-----FNCVYTF-ESDVWSYGIFLWE--------- 262
Query: 353 IFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
+F +PY + P+D F M K + R + P ++ M +MK CW
Sbjct: 263 LFSLGSSPYPGM-PVDSKFYKMIK----EGFRMLSPEHAPAE-----MYDIMKTCW 308
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SAXKSSDLWALGCIIYQLV 228
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 76 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 130 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 179
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + + + DI++LG + E+ R
Sbjct: 180 EIL---LGXKYYST--AVDIWSLGCIFAEMVTR 207
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 192 --NSFVGTAQYVSPELLTEK------SASKSSDLWALGCIIYQLV 228
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 28/213 (13%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V+ R GE VA+K E T I LL+ H NI+ +
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
T +L+LV + D T + + ++ GL H+
Sbjct: 69 DVIHTE----NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-- 122
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K +N+L+ T G +ADFGLA ++ V T Y +P
Sbjct: 123 ------RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY----THEVVTLWYRAP 172
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEVCRR 347
EIL + + + DI++LG + E+ R
Sbjct: 173 EIL---LGXKYYST--AVDIWSLGCIFAEMVTR 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 69/310 (22%)
Query: 136 KQISLS-----ECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTV 185
K+ISLS E +G+ R+G+V++G G + AV I +D+A E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 186 LLR----HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD-------HLNRTTLNHHQ 234
+LR H N++ +G + +++ L ++ Y S G L++ H + + + +
Sbjct: 81 MLRARLQHPNVVCLLG--VVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 235 MMKICLSIVNGLVHLHTEIFGTQ---GKPAIAHRDIKSKNILVKTNGTCVIADFGL---- 287
+K L + VHL +I + H+D+ ++N+LV I+D GL
Sbjct: 137 TVKSALEPPD-FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 288 -AVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
A Y +L +P R+M+PE I+ ++D +DI++ G+VLWEV
Sbjct: 196 YAADYYKLLGNSLLP-------IRWMAPEAIMYGKFSID-------SDIWSYGVVLWEV- 240
Query: 346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
F PY D V+ + + R VLP D + +M
Sbjct: 241 --------FSYGLQPYCGYSNQD--------VVEMIRNRQVLP---CPDDCPAWVYALMI 281
Query: 406 ECWHQNANVR 415
ECW++ + R
Sbjct: 282 ECWNEFPSRR 291
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 69/310 (22%)
Query: 136 KQISLS-----ECIGKGRYGEVWRGVWHG-----ENVAVKIFFSRDEASWSRETEIYSTV 185
K+ISLS E +G+ R+G+V++G G + AV I +D+A E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 186 LLR----HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD-------HLNRTTLNHHQ 234
+LR H N++ +G + +++ L ++ Y S G L++ H + + + +
Sbjct: 64 MLRARLQHPNVVCLLG--VVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 235 MMKICLSIVNGLVHLHTEIFGTQ---GKPAIAHRDIKSKNILVKTNGTCVIADFGL---- 287
+K L + VHL +I + H+D+ ++N+LV I+D GL
Sbjct: 120 TVKSALEPPD-FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 288 -AVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
A Y +L +P R+M+PE I+ ++D +DI++ G+VLWEV
Sbjct: 179 YAADYYKLLGNSLLP-------IRWMAPEAIMYGKFSID-------SDIWSYGVVLWEV- 223
Query: 346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
F PY D V+ + + R VLP D + +M
Sbjct: 224 --------FSYGLQPYCGYSNQD--------VVEMIRNRQVLP---CPDDCPAWVYALMI 264
Query: 406 ECWHQNANVR 415
ECW++ + R
Sbjct: 265 ECWNEFPSRR 274
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 35/158 (22%)
Query: 204 NSCTQLWLVTHYHSFGS------LYDHLNRTTLNH----------HQMMKICLSIVNGLV 247
+ C ++V Y +F S +H++ +L+ + K+ ++++ GL
Sbjct: 69 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA 128
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
+L K I HRD+K NILV + G + DFG++ QL + M N VG
Sbjct: 129 YLRE-------KHQIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSM---ANSFVG 175
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T+ YM+PE L + ++DI+++GL L E+
Sbjct: 176 TRSYMAPERLQGT------HYSVQSDIWSMGLSLVELA 207
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
L + IG G +G + R E VAVK ++ + + + EI + LRH NI+ +
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFK 81
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+T T L +V Y S G L++ + N + + +++G+ + H
Sbjct: 82 EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGT--CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
+ HRD+K +N L+ + I DFG YS+ S+ + P VGT Y++
Sbjct: 135 -----QVCHRDLKLENTLLDGSPAPRLKICDFG----YSK-SSVLHSQPKSTVGTPAYIA 184
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
PE+L + K AD+++ G+ L+
Sbjct: 185 PEVL-----LKKEYDGKVADVWSCGVTLY 208
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG--SDMTSRNSCTQLWLVTH 214
NVA+K SR + + Y ++L H+NI+G + + S +++V
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 215 YHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV 274
+ + + L+H +M + ++ G+ HLH+ I HRD+K NI+V
Sbjct: 110 L--MDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVV 159
Query: 275 KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADI 334
K++ T I DFGLA + + S M P V T+ Y +PE++ + M E+ DI
Sbjct: 160 KSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDI 208
Query: 335 YALGLVLWEVCR 346
+++G ++ E+ +
Sbjct: 209 WSVGCIMGEMIK 220
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 138 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 190 --NAFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 226
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + + S M P V T+ Y +PE++ + M E+
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMM----TPEVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWEVCR 346
DI+++G ++ E+ +
Sbjct: 207 DIWSVGCIMGEMIK 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 137 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR- 187
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 188 -ANSFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 225
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 33/196 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + + S M+ P V T+ Y +PE++ + M E+
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMME----PEVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWE-VCRR 347
D++++G ++ E VC +
Sbjct: 207 DLWSVGCIMGEMVCHK 222
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
L HLH++ + H D+K NI + G C + DFGL V + ++ +
Sbjct: 170 LAHLHSQ--------GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG-TAGAGEV----Q 216
Query: 306 VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
G RYM+PE+L S AD+++LGL + EV
Sbjct: 217 EGDPRYMAPELLQGSYGT-------AADVFSLGLTILEVA 249
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 118 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 169
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 170 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 134 LAKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEAS--WSRETEIYSTVLLRH 189
L K L E IG G + +V + GE VA+KI S +TEI + LRH
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRH 67
Query: 190 ENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVH 248
++I T+ ++++V Y G L+D++ ++ L+ + + IV+ + +
Sbjct: 68 QHICQLYHVLETA----NKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAY 123
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
+H++ + AHRD+K +N+L + DFGL ++ D G+
Sbjct: 124 VHSQGY--------AHRDLKPENLLFDEYHKLKLIDFGLC---AKPKGNKDYHLQTCCGS 172
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y +PE++ + +AD++++G++L+
Sbjct: 173 LAYAAPELIQGKSYLG-----SEADVWSMGILLY 201
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 117 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 168
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 169 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 141 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 193 --NSFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 72
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++T + FG+L +L R+ N K+
Sbjct: 73 -KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPED 130
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 186
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 187 -----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 233
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 234 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 275
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 276 LDCWHGEPSQR 286
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 169 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 214
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 138 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 190 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 115 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 166
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 167 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 116 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 168 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 204
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 213 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 258
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 228
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 71/307 (23%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+++L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++ + FG+L +L R+ N K
Sbjct: 82 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKDLYKD 139
Query: 243 VNGLVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA-------- 191
Query: 297 KMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 192 -RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE----- 238
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECW 408
IF +PY V +D F R++ + R D T M + M +CW
Sbjct: 239 ----IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTMLDCW 284
Query: 409 HQNANVR 415
H + R
Sbjct: 285 HGEPSQR 291
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 138 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 190 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
++I+L +G+G +G V+ G + GE VAVK R+ + E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
H ++ +G + + + L+ H G L +L R
Sbjct: 77 FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
+M+++ I +G+ +L+ + F HRD+ ++N +V + T I DFG+
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
+Y + K +P R+M+PE L + + F + +D+++ G+VLWE+
Sbjct: 183 TAYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
+ PY L S + + K + +DQ D+ +T +M
Sbjct: 230 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
+ CW N +R + L + L
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLL 286
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 137 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR- 187
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 188 -ANXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 225
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 169 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 214
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 122 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR- 172
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 173 -ANXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 210
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 143 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 194
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 195 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 145 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 196
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 197 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 138 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 190 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 141 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 192
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 193 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 229
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 43/246 (17%)
Query: 130 IQRTLAKQISLSECIGKGRYGEV-WRGVWHGENVAVKIFF------SRDEASWSRETEIY 182
+++L + + +G G G V ++G + G VAVK + E E++
Sbjct: 9 FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-- 66
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-----HHQMMK 237
H N++ Y S+ T R L L + L + N + N + +
Sbjct: 67 -----DHPNVIRYYCSETTDRFLYIALELCNL--NLQDLVESKNVSDENLKLQKEYNPIS 119
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIAD 284
+ I +G+ HLH+ I HRD+K +NILV T N +I+D
Sbjct: 120 LLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
FGL + N GT + +PE+L+ES N+ ++ DI+++G V +
Sbjct: 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 344 VCRRTK 349
+ + K
Sbjct: 232 ILSKGK 237
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 168 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 213
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 228
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 174 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 176 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 176 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 221
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
++I+L +G+G +G V+ G + GE VAVK R+ + E +
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
H ++ +G + + + L+ H G L +L R
Sbjct: 78 FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 131
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
+M+++ I +G+ +L+ + F HR++ ++N +V + T I DFG+
Sbjct: 132 EMIQMAAEIADGMAYLNAKKF--------VHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
Y + K +P R+M+PE L + + F + +D+++ G+VLWE+
Sbjct: 184 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 230
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
+ PY L S + + K + +DQ D+ +T +M
Sbjct: 231 EQ---------PYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 266
Query: 405 KECWHQNANVRLSALRVKKTL 425
+ CW N N+R + L + L
Sbjct: 267 RMCWQFNPNMRPTFLEIVNLL 287
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 175 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ + S M P V T+ Y +PE++ + M E+ DI+++G ++ E+ R
Sbjct: 213 T-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMVR 258
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 85 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFG A
Sbjct: 140 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 168
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+ L +LH GK I HRD+K +NIL+ + I DFG A S S +
Sbjct: 140 EIVSALEYLH-------GK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191
Query: 301 PPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
N VGT +Y+SPE+L E + K +D++ALG +++++
Sbjct: 192 --NXFVGTAQYVSPELLTEK------SACKSSDLWALGCIIYQLV 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 129/321 (40%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
++I+L +G+G +G V+ G + GE VAVK R+ + E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
H ++ +G + + + L+ H G L +L R
Sbjct: 77 FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
+M+++ I +G+ +L+ + F HR++ ++N +V + T I DFG+
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
Y + K +P R+M+PE L + + F + +D+++ G+VLWE+
Sbjct: 183 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
+ PY L S + + K + +DQ D+ +T +M
Sbjct: 230 EQ---------PYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
+ CW N N+R + L + L
Sbjct: 266 RMCWQFNPNMRPTFLEIVNLL 286
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 220 SLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT 279
+L D +NR + +CL I + E ++G + HRD+K NI +
Sbjct: 147 NLKDWMNRRCSLEDREHGVCLHIFIQIAEA-VEFLHSKG---LMHRDLKPSNIFFTMDDV 202
Query: 280 CVIADFGLAVSYSQLSNKMDI-PPNP-------RVGTKRYMSPEILDESINMDCFESFKK 331
+ DFGL + Q + + P P +VGTK YMSP E I+ + + K
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSP----EQIHGNNYSH--K 256
Query: 332 ADIYALGLVLWEV 344
DI++LGL+L+E+
Sbjct: 257 VDIFSLGLILFEL 269
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
L + IG G +G + R E VAVK ++ + + EI + LRH NI+ +
Sbjct: 21 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 80
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+T T L +V Y S G L++ + N + + +++G+ + H
Sbjct: 81 EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--- 133
Query: 256 TQGKPAIAHRDIKSKNILVKTNGT--CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
+ HRD+K +N L+ + I DFG YS+ S+ + P VGT Y++
Sbjct: 134 -----QVCHRDLKLENTLLDGSPAPRLKICDFG----YSK-SSVLHSQPKSTVGTPAYIA 183
Query: 314 PEILDESINMDCFESFKKADIYALGLVLW 342
PE+L + K AD+++ G+ L+
Sbjct: 184 PEVL-----LKKEYDGKVADVWSCGVTLY 207
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + + S M P V T+ Y +PE++ + M E+
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWEVCR 346
DI+++G ++ E+ +
Sbjct: 207 DIWSVGCIMGEMIK 220
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 51 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 105
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 106 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 157
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + + S M P V T+ Y +PE++ + M E+
Sbjct: 158 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 206
Query: 333 DIYALGLVLWEVCR 346
DI+++G ++ E+ +
Sbjct: 207 DIWSVGCIMGEMIK 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
L H N++ + ++ + L++V + G + + L+ Q ++ G+
Sbjct: 93 LDHPNVVKLV--EVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGI 150
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSY----SQLSNKMDIPP 302
+LH + I HRDIK N+LV +G IADFG++ + + LSN
Sbjct: 151 EYLHYQ--------KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN------ 196
Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
VGT +M+PE L E+ + S K D++A+G+ L+
Sbjct: 197 --TVGTPAFMAPESLSETRKI---FSGKALDVWAMGVTLY 231
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 72
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++T + FG+L +L R+ N K+
Sbjct: 73 -KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPED 130
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 186
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 187 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 233
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 234 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 275
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 276 LDCWHGEPSQR 286
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 127/317 (40%), Gaps = 82/317 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
++I+L +G+G +G V+ G + GE VAVK R+ + E +
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
H ++ +G + + + L+ H G L +L R
Sbjct: 76 FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 129
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
+M+++ I +G+ +L+ + F HRD+ ++N +V + T I DFG+
Sbjct: 130 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
Y + K +P R+M+PE L + + F + +D+++ G+VLWE+
Sbjct: 182 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 228
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
+ PY L S + + K + +DQ D+ +T +M
Sbjct: 229 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 264
Query: 405 KECWHQNANVRLSALRV 421
+ CW N +R + L +
Sbjct: 265 RMCWQFNPKMRPTFLEI 281
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 83 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFG A
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 166
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ +G G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 83 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFG A
Sbjct: 138 R--------RLVHRDLAARNVLVKTPQHVKITDFGRA 166
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 52 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 106
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 107 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 158
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + + S M P V T+ Y +PE++ + M E+
Sbjct: 159 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 207
Query: 333 DIYALGLVLWEVCR 346
DI+++G ++ E+ +
Sbjct: 208 DIWSVGCIMGEMIK 221
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 18/207 (8%)
Query: 142 ECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIG 197
+ IG+G YG V H VA+K + ++ + T EI + RHEN++G
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
S + + LY L L++ + I+ GL ++H+
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA----- 163
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 164 ---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGF-LTEXVATRWYRAPEIM 219
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 220 ---LNSKGYT--KSIDIWSVGCILAEM 241
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 128/321 (39%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
++I+L +G+G +G V+ G + GE VAVK R+ + E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
H ++ +G + + + L+ H G L +L R
Sbjct: 77 FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA----- 288
+M+++ I +G+ +L+ + F HRD+ ++N +V + T I DFG+
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
Y + K +P R+M+PE L + + F + +D+++ G+VLWE+
Sbjct: 183 TDYYRKGGKGLLP-------VRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
+ PY L S + + K + +DQ D+ +T +M
Sbjct: 230 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
+ CW N +R + L + L
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLL 286
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 142 ECIGKGRYGEVWRGVWHGENVAVKIFFS----RDEASWSRETEI----YSTVLLRHENIL 193
+ + G +G V++G+W E VKI + R+ S EI Y + + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHT 251
+G +TS + L+ FG L D++ ++ + ++ C+ I G+ +L
Sbjct: 88 RLLGICLTS-----TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ HRD+ ++N+LVKT I DFGLA
Sbjct: 143 R--------RLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 144 IGKGRYG--EVWRGVWHGEN----VAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYI 196
+GKG +G E+ R G+N VAVK + S + + EI L + I+ Y
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 197 G-SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
G S R S L LV Y G L D L +R L+ +++ I G+ +L
Sbjct: 79 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---- 131
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
G HRD+ ++NILV++ IADFGLA L + P + +
Sbjct: 132 ----GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYYVVREPGQSPIFWYA 186
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEV 344
PE L ++I +++D+++ G+VL+E+
Sbjct: 187 PESLSDNIFS------RQSDVWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 144 IGKGRYG--EVWRGVWHGEN----VAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYI 196
+GKG +G E+ R G+N VAVK + S + + EI L + I+ Y
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 197 G-SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
G S R S L LV Y G L D L +R L+ +++ I G+ +L
Sbjct: 91 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---- 143
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
G HRD+ ++NILV++ IADFGLA L + P + +
Sbjct: 144 ----GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYYVVREPGQSPIFWYA 198
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEV 344
PE L ++I +++D+++ G+VL+E+
Sbjct: 199 PESLSDNIFS------RQSDVWSFGVVLYEL 223
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 72
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++T + FG+L +L R+ N K+
Sbjct: 73 -KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL-RSKRNEFVPYKVAPED 130
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 186
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 187 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 233
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 234 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 275
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 276 LDCWHGEPSQR 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 127/321 (39%), Gaps = 82/321 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
++I+L +G+G +G V+ G + GE VAVK R+ + E +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
H ++ +G + + + L+ H G L +L R
Sbjct: 77 FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
+M+++ I +G+ +L+ + F HRD+ ++N +V + T I DFG+ +
Sbjct: 131 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 294 LSNKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
R G K R+M+PE L + + F + +D+++ G+VLWE+
Sbjct: 183 TDXX-------RKGGKGLLPVRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 229
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
+ PY L S + + K + +DQ D+ +T +M
Sbjct: 230 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 265
Query: 405 KECWHQNANVRLSALRVKKTL 425
+ CW N +R + L + L
Sbjct: 266 RMCWQFNPKMRPTFLEIVNLL 286
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK ++ +DE + E I S
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 105 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 159 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 211 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 253
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 144 IGKGRYG--EVWRGVWHGEN----VAVK-IFFSRDEASWSRETEIYSTVLLRHENILGYI 196
+GKG +G E+ R G+N VAVK + S + + EI L + I+ Y
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 197 G-SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEI 253
G S R S L LV Y G L D L +R L+ +++ I G+ +L
Sbjct: 78 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---- 130
Query: 254 FGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
G HRD+ ++NILV++ IADFGLA L + P + +
Sbjct: 131 ----GSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYYVVREPGQSPIFWYA 185
Query: 314 PEILDESINMDCFESFKKADIYALGLVLWEV 344
PE L ++I +++D+++ G+VL+E+
Sbjct: 186 PESLSDNIFS------RQSDVWSFGVVLYEL 210
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 43/246 (17%)
Query: 130 IQRTLAKQISLSECIGKGRYGEV-WRGVWHGENVAVKIFF------SRDEASWSRETEIY 182
+++L + + +G G G V ++G + G VAVK + E E++
Sbjct: 9 FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-- 66
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-----HHQMMK 237
H N++ Y S+ T R L L + L + N + N + +
Sbjct: 67 -----DHPNVIRYYCSETTDRFLYIALELCNL--NLQDLVESKNVSDENLKLQKEYNPIS 119
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIAD 284
+ I +G+ HLH+ I HRD+K +NILV T N +I+D
Sbjct: 120 LLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWE 343
FGL N GT + +PE+L+ES N+ ++ DI+++G V +
Sbjct: 172 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 344 VCRRTK 349
+ + K
Sbjct: 232 ILSKGK 237
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 142 EC---IGKGRYGEVWRG---VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH------ 189
EC IG+G YG+V++ G VA+K + + I +LRH
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 190 ENILGYIGSDMTSR-NSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
N++ SR + T+L LV + + D + + + + ++ GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
LH+ + HRD+K +NILV ++G +ADFGLA YS + V
Sbjct: 134 DFLHSH--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVV 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
T Y +PE+L +S D++++G + E+ RR
Sbjct: 181 VTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR 215
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 142 EC---IGKGRYGEVWRG---VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH------ 189
EC IG+G YG+V++ G VA+K + + I +LRH
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 190 ENILGYIGSDMTSR-NSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
N++ SR + T+L LV + + D + + + + ++ GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
LH+ + HRD+K +NILV ++G +ADFGLA YS + V
Sbjct: 134 DFLHSH--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVV 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
T Y +PE+L +S D++++G + E+ RR
Sbjct: 181 VTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR 215
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 144 IGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDMT 201
IG G +G + R E VAVK + + EI + LRH NI+ + +T
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
T L ++ Y S G LY+ + N + + +++G+ + H+
Sbjct: 88 P----THLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM-------- 135
Query: 261 AIAHRDIKSKNILVKTNGT--CVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
I HRD+K +N L+ + I DFG YS+ S+ + P VGT Y++PE+L
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFG----YSK-SSVLHSQPKSTVGTPAYIAPEVL- 189
Query: 319 ESINMDCFESFKKADIYALGLVLW 342
+ K AD+++ G+ L+
Sbjct: 190 ----LRQEYDGKIADVWSCGVTLY 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 142 EC---IGKGRYGEVWRG---VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRH------ 189
EC IG+G YG+V++ G VA+K + + I +LRH
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 190 ENILGYIGSDMTSR-NSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
N++ SR + T+L LV + + D + + + + ++ GL
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
LH+ + HRD+K +NILV ++G +ADFGLA YS + V
Sbjct: 134 DFLHSH--------RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVV 180
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
T Y +PE+L +S D++++G + E+ RR
Sbjct: 181 VTLWYRAPEVLLQS------SYATPVDLWSVGCIFAEMFRR 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 32/194 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 53 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 107
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 108 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 159
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + ++ M + P V T+ Y +PE++ + M E+
Sbjct: 160 VVKSDCTLKILDFGLARTAG--TSFMMV---PFVVTRYYRAPEVI---LGMGYKEN---V 208
Query: 333 DIYALGLVLWEVCR 346
DI+++G ++ E+ +
Sbjct: 209 DIWSVGCIMGEMIK 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 33/196 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 45 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 99
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 100 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 151
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + + S M P V T+ Y +PE++ + M E+
Sbjct: 152 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 200
Query: 333 DIYALGLVLWE-VCRR 347
D++++G ++ E VC +
Sbjct: 201 DLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 33/196 (16%)
Query: 161 NVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIGSDMTSRNSCTQLWLVTHYH 216
NVA+K SR + + Y ++L H+NI+G + T + S + V +
Sbjct: 56 NVAIKKL-SRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-FTPQKSLEEFQDV---Y 110
Query: 217 SFGSLYD----HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNI 272
L D + + L+H +M + ++ G+ HLH+ I HRD+K NI
Sbjct: 111 IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNI 162
Query: 273 LVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKA 332
+VK++ T I DFGLA + + S M P V T+ Y +PE++ + M E+
Sbjct: 163 VVKSDCTLKILDFGLART-AGTSFMM----TPYVVTRYYRAPEVI---LGMGYKEN---V 211
Query: 333 DIYALGLVLWE-VCRR 347
D++++G ++ E VC +
Sbjct: 212 DLWSVGCIMGEMVCHK 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 126/317 (39%), Gaps = 82/317 (25%)
Query: 136 KQISLSECIGKGRYGEVWRG----VWHGE---NVAVKIFFS----RDEASWSRETEIYST 184
++I+L +G+G +G V+ G + GE VAVK R+ + E +
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-----------NRTTLNHH 233
H ++ +G + + + L+ H G L +L R
Sbjct: 74 FTCHH--VVRLLGVVSKGQPTLVVMELMAH----GDLKSYLRSLRPEAENNPGRPPPTLQ 127
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
+M+++ I +G+ +L+ + F HRD+ ++N +V + T I DFG+ +
Sbjct: 128 EMIQMAAEIADGMAYLNAKKF--------VHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 294 LSNKMDIPPNPRVGTK-----RYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
R G K R+M+PE L + + F + +D+++ G+VLWE+
Sbjct: 180 TDXX-------RKGGKGLLPVRWMAPESLKDGV----FTT--SSDMWSFGVVLWEITSLA 226
Query: 349 KANGIFEEYKAPYHDLVPMDPSFDDMRKVIC----IDQQRPVLPNRWVSDSTLNAMTKVM 404
+ PY L S + + K + +DQ D+ +T +M
Sbjct: 227 ---------EQPYQGL-----SNEQVLKFVMDGGYLDQ----------PDNCPERVTDLM 262
Query: 405 KECWHQNANVRLSALRV 421
+ CW N +R + L +
Sbjct: 263 RMCWQFNPKMRPTFLEI 279
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 129/310 (41%), Gaps = 74/310 (23%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
+++L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 82
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++ + FG+L +L R+ N K +
Sbjct: 83 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKTPEDL 140
Query: 243 VNGLVHL-HTEIFGTQ---GKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
+ L H + Q G +A HRD+ ++NIL+ I DFGLA
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA----- 195
Query: 294 LSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 196 ----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE-- 242
Query: 346 RRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMK 405
IF +PY V +D F R++ + R D T M + M
Sbjct: 243 -------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTML 285
Query: 406 ECWHQNANVR 415
+CWH + R
Sbjct: 286 DCWHGEPSQR 295
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
L H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 105 --LNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 159 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 211 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 253
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
+ +GKG +G+V R G A+KI ++DE + T S VL RH +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 72
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+ T C V Y + G L+ HL+R + + + IV+ L +LH+
Sbjct: 73 TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RDIK +N+++ +G I DFGL M GT Y
Sbjct: 129 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXFCGTPEY 176
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
++PE+L+++ + + D + LG+V++E +C R
Sbjct: 177 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
+ +GKG +G+V R G A+KI ++DE + T S VL RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+ T C V Y + G L+ HL+R + + + IV+ L +LH+
Sbjct: 68 TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RDIK +N+++ +G I DFGL M GT Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KTFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
++PE+L+++ + + D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENIL 193
L + +G G +G+V G G VAVKI + S + EI + L RH +I+
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
T T ++V Y S G L+D++ + + ++ I++ + + H
Sbjct: 75 KLYQVISTP----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
+ + HRD+K +N+L+ + IADFGL+ S D G+ Y
Sbjct: 131 M--------VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD-----SCGSPNYA 177
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PE++ + + + DI++ G++L+
Sbjct: 178 APEVISGRLY-----AGPEVDIWSCGVILY 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
+ +GKG +G+V R G A+KI ++DE + T S VL RH +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 70
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+ T C V Y + G L+ HL+R + + + IV+ L +LH+
Sbjct: 71 TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RDIK +N+++ +G I DFGL M GT Y
Sbjct: 127 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KTFCGTPEY 174
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
++PE+L+++ + + D + LG+V++E +C R
Sbjct: 175 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
+ +GKG +G+V R G A+KI ++DE + T S VL RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+ T C V Y + G L+ HL+R + + + IV+ L +LH+
Sbjct: 68 TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RDIK +N+++ +G I DFGL M GT Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KTFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
++PE+L+++ + + D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 72
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++ + FG+L +L R+ N K+
Sbjct: 73 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 130
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 186
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 187 -----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 233
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 234 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 275
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 276 LDCWHGEPSQR 286
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
+ +GKG +G+V R G A+KI ++DE + T S VL RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+ T C V Y + G L+ HL+R + + + IV+ L +LH+
Sbjct: 68 TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RDIK +N+++ +G I DFGL M GT Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
++PE+L+++ + + D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 30/212 (14%)
Query: 138 ISLSECIGKGRYGEVWR--GVWHGENVAVKIFFSRDEASWSR-ETEIYSTVLLRHENILG 194
+S +E +G GR+G+V + G +A KI +R + EI L H N++
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL--SIVNGLVHLHTE 252
+ S+N LV Y G L+D + + N ++ I I G+ H+H
Sbjct: 151 LYDA-FESKNDIV---LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-- 204
Query: 253 IFGTQGKPAIAHRDIKSKNIL-VKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ I H D+K +NIL V + + I DFGLA Y + K+ + GT
Sbjct: 205 ------QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY-KPREKLKV----NFGTPE 253
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
+++PE+ +N D F SF D++++G++ +
Sbjct: 254 FLAPEV----VNYD-FVSF-PTDMWSVGVIAY 279
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++ + FG+L +L R+ N K+
Sbjct: 82 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 139
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 195
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 196 -----RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 242
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 243 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 284
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 285 LDCWHGEPSQR 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
+ +GKG +G+V R G A+KI ++DE + T S VL RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+ T C V Y + G L+ HL+R + + + IV+ L +LH+
Sbjct: 68 TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RDIK +N+++ +G I DFGL M GT Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
++PE+L+++ + + D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
L H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 91 --LNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 145 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 197 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 239
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 187 LRHENILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
L+HEN++G + + TS ++++LVT L + + L+ + + ++
Sbjct: 84 LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQLLR 142
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
GL ++H+ I HRD+K N+ V + I DFGLA + D
Sbjct: 143 GLKYIHS--------AGIIHRDLKPSNVAVNEDSELRILDFGLA-------RQADEEMTG 187
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
V T+ Y +PEI+ ++ + DI+++G ++ E+ +
Sbjct: 188 YVATRWYRAPEIM-----LNWMHYNQTVDIWSVGCIMAELLQ 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSR----ETEIYSTVLLRHENIL 193
L + +G G +G+V G G VAVKI + S + EI + L RH +I+
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 194 GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTE 252
T T ++V Y S G L+D++ + + ++ I++ + + H
Sbjct: 75 KLYQVISTP----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV--GTKR 310
+ + HRD+K +N+L+ + IADFG LSN M R G+
Sbjct: 131 M--------VVHRDLKPENVLLDAHMNAKIADFG-------LSNMMSDGEFLRTSCGSPN 175
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y +PE++ + + + DI++ G++L+
Sbjct: 176 YAAPEVISGRLY-----AGPEVDIWSCGVILY 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 142 ECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYSTVL--LRHENI 192
+ +GKG +G+V R G A+KI ++DE + T S VL RH +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA---HTVTESRVLQNTRHPFL 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHT 251
+ T C V Y + G L+ HL+R + + + IV+ L +LH+
Sbjct: 68 TALKYAFQTHDRLC----FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ +RDIK +N+++ +G I DFGL M GT Y
Sbjct: 124 R--------DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----KXFCGTPEY 171
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
++PE+L+++ + + D + LG+V++E +C R
Sbjct: 172 LAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+GL HLH I +RD+K +N+L+ +G I+D GLAV K
Sbjct: 297 QIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-- 346
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
GT +M+PE +L E + D +ALG+ L+E+
Sbjct: 347 --KGYAGTPGFMAPELLLGEEYDFSV-------DYFALGVTLYEM 382
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+GL HLH I +RD+K +N+L+ +G I+D GLAV K
Sbjct: 297 QIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-- 346
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
GT +M+PE +L E + D +ALG+ L+E+
Sbjct: 347 --KGYAGTPGFMAPELLLGEEYDFSV-------DYFALGVTLYEM 382
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+GL HLH I +RD+K +N+L+ +G I+D GLAV K
Sbjct: 297 QIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-- 346
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
GT +M+PE +L E + D +ALG+ L+E+
Sbjct: 347 --KGYAGTPGFMAPELLLGEEYDFSV-------DYFALGVTLYEM 382
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 132 RTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYST 184
R + + +GKG +G+V + G A+KI ++DE + + TE
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVL 64
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIV 243
RH + S T C V Y + G L+ HL+R + + IV
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLC----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 120
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
+ L +LH+E + +RD+K +N+++ +G I DFGL + M
Sbjct: 121 SALDYLHSE-------KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM----K 169
Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
GT Y++PE+L+++ + + D + LG+V++E +C R
Sbjct: 170 XFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 130 IQRTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIY 182
+ R + + +GKG +G+V + G A+KI ++DE + + TE
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENR 61
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLS 241
RH + S T C V Y + G L+ HL+R + +
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLC----FVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
IV+ L +LH+E + +RD+K +N+++ +G I DFGL + M
Sbjct: 118 IVSALDYLHSE-------KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--- 167
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
GT Y++PE+L+++ + + D + LG+V++E +C R
Sbjct: 168 -KXFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI--ND 90
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 145
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 146 ---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 201
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 202 ---LNSKGYT--KSIDIWSVGCILAEM 223
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
IV+GL HLH I +RD+K +N+L+ +G I+D GLAV K
Sbjct: 297 QIVSGLEHLHQR--------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-- 346
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
GT +M+PE +L E + D +ALG+ L+E+
Sbjct: 347 --KGYAGTPGFMAPELLLGEEYDF-------SVDYFALGVTLYEM 382
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 124/316 (39%), Gaps = 87/316 (27%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML--KEGATHSEHRALMSEL---- 83
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLN---------------R 227
IL +IG + N +CT+ L ++ + FG+L +L +
Sbjct: 84 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK 142
Query: 228 TTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
L ++ + G+ L + HRD+ ++NIL+ I DFGL
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFLASR--------KXIHRDLAARNILLSEKNVVKICDFGL 194
Query: 288 AVSYSQLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGL 339
A DI +P R G R +M+PE I D + ++D+++ G+
Sbjct: 195 A---------RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGV 238
Query: 340 VLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNA 399
+LWE IF +PY V +D F R++ + R D T
Sbjct: 239 LLWE---------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPE 279
Query: 400 MTKVMKECWHQNANVR 415
M + M +CWH + R
Sbjct: 280 MYQTMLDCWHGEPSQR 295
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++ + FG+L +L R+ N K+
Sbjct: 82 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 139
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 195
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 196 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 242
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 243 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 284
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 285 LDCWHGEPSQR 295
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 132 RTLAKQISLSECIGKGRYGEVW--RGVWHGENVAVKIF-----FSRDEASWSRETEIYST 184
R + + +GKG +G+V + G A+KI ++DE + + TE
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL-TENRVL 62
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIV 243
RH + S T C V Y + G L+ HL+R + + IV
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLC----FVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPN 303
+ L +LH+E + +RD+K +N+++ +G I DFGL + M
Sbjct: 119 SALDYLHSE-------KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM----K 167
Query: 304 PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VCRR 347
GT Y++PE+L+++ + + D + LG+V++E +C R
Sbjct: 168 XFCGTPEYLAPEVLEDN------DYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 133 TLAKQISLSECIGKGRYGEVWRGV--WHGENVAVKI-----FFSRDEASWSRETEIYSTV 185
++ + L E IGKG + V R V G A KI +RD RE I
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARI--CR 58
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVN 244
LL+H NI+ D S +LV + G L+ D + R + I+
Sbjct: 59 LLKHSNIVRL--HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIP 301
++H H + + HRD+K +N+L+ K G V +ADFGLA+
Sbjct: 115 AVLHCH--------QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW--- 163
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLW 342
GT Y+SPE+L + E++ K DI+A G++L+
Sbjct: 164 -FGFAGTPGYLSPEVLRK-------EAYGKPVDIWACGVILY 197
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 118
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++ + FG+L +L R+ N K+
Sbjct: 119 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 176
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 232
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 233 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 279
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 280 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 321
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 322 LDCWHGEPSQR 332
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 43/223 (19%)
Query: 138 ISLSECIGKGRYGEVWR-----GVWHGENVAVKIFF-------SRDEASWSRETEIYSTV 185
L +GKG YG+V++ G G+ A+K+ ++D A E I V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN- 244
+H I+ I + T +L+L+ Y S G L+ L R + L+ ++
Sbjct: 79 --KHPFIVDLIYAFQTG----GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL---AVSYSQLSNKMDIP 301
L HLH + I +RD+K +NI++ G + DFGL ++ +++
Sbjct: 133 ALGHLHQK--------GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF--- 181
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT YM+PEIL S + + D ++LG +++++
Sbjct: 182 ----CGTIEYMAPEILMRSGHN------RAVDWWSLGALMYDM 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 43/223 (19%)
Query: 138 ISLSECIGKGRYGEVWR-----GVWHGENVAVKIFF-------SRDEASWSRETEIYSTV 185
L +GKG YG+V++ G G+ A+K+ ++D A E I V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN- 244
+H I+ I + T +L+L+ Y S G L+ L R + L+ ++
Sbjct: 79 --KHPFIVDLIYAFQTG----GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL---AVSYSQLSNKMDIP 301
L HLH + I +RD+K +NI++ G + DFGL ++ +++
Sbjct: 133 ALGHLHQK--------GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF--- 181
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT YM+PEIL S + + D ++LG +++++
Sbjct: 182 ----CGTIEYMAPEILMRSGHN------RAVDWWSLGALMYDM 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
+L V Y + G L+ HL+R + + IV+ L +LH+E + +RD
Sbjct: 222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE-------KNVVYRD 274
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
+K +N+++ +G I DFGL + M GT Y++PE+L+++
Sbjct: 275 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT----FCGTPEYLAPEVLEDN------ 324
Query: 327 ESFKKADIYALGLVLWE-VCRR 347
+ + D + LG+V++E +C R
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
+L V Y + G L+ HL+R + + IV+ L +LH+E + +RD
Sbjct: 225 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE-------KNVVYRD 277
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
+K +N+++ +G I DFGL + M GT Y++PE+L+++
Sbjct: 278 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT----FCGTPEYLAPEVLEDN------ 327
Query: 327 ESFKKADIYALGLVLWE-VCRR 347
+ + D + LG+V++E +C R
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 129/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 81
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSI 242
IL +IG + N +CT+ L ++ + FG+L +L R+ N K+
Sbjct: 82 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKVAPED 139
Query: 243 VNG----LVHLHTEIFG-TQGKPAIA-----HRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ L HL F +G +A HRD+ ++NIL+ I DFGLA
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 195
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 196 -----RDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 242
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 243 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 284
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 285 LDCWHGEPSQR 295
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S +++ + G L L T Q ++
Sbjct: 90 --FNHQNIVRCIGVSLQS----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 144 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 196 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 82 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 135
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 136 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 187
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 188 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 86
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 141
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 142 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 197
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 198 ---LNSKGYT--KSIDIWSVGCILAEM 219
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE-XVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 93
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 148
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 149 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE-XVATRWYRAPEIM 204
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 205 ---LNSKGYT--KSIDIWSVGCILAEM 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 86
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 141
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 142 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 197
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 198 ---LNSKGYT--KSIDIWSVGCILAEM 219
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 93
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 148
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 149 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 204
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 205 ---LNSKGYT--KSIDIWSVGCILAEM 226
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 19/117 (16%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
L+H +M + ++ G+ HLH+ I HRD+K NI+VK++ T I DFGLA
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA--------GIIHRDLKPSNIVVKSDCTLKILDFGLA- 173
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
+ +N M P V T+ Y +PE++ + M + DI+++G ++ E+ +
Sbjct: 174 -RTACTNFM---MTPYVVTRYYRAPEVI---LGMGYAAN---VDIWSVGCIMGELVK 220
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 94
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 149
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 150 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 205
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 206 ---LNSKGYT--KSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 85
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 140
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 141 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 196
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 197 ---LNSKGYT--KSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 90 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 144 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 196 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 238
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 93/236 (39%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S +++ + G L L T Q ++
Sbjct: 105 --FNHQNIVRCIGVSLQS----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 159 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 211 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 253
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHEN 191
+ + +G+G +G+V + +H G+ VA+KI ++ + E EI LLRH +
Sbjct: 7 QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
I+ D+ S ++ +V Y + L+D++ R ++ + + I++ + + H
Sbjct: 66 IIKL--YDVIK--SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ I HRD+K +N+L+ + IADFGL+ + N + G+
Sbjct: 121 --------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFL----KTSCGSPN 167
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW-EVCRR 347
Y +PE++ + + + D+++ G++L+ +CRR
Sbjct: 168 YAAPEVISGKLY-----AGPEVDVWSCGVILYVMLCRR 200
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHEN 191
+ + +G+G +G+V + +H G+ VA+KI ++ + E EI LLRH +
Sbjct: 11 QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
I+ D+ S ++ +V Y + L+D++ R ++ + + I++ + + H
Sbjct: 70 IIKL--YDVIK--SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ I HRD+K +N+L+ + IADFGL+ + N + G+
Sbjct: 125 --------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFL----KTSCGSPN 171
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW-EVCRR 347
Y +PE++ + + + D+++ G++L+ +CRR
Sbjct: 172 YAAPEVISGKLY-----AGPEVDVWSCGVILYVMLCRR 204
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI--ND 90
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 145
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 146 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 201
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 202 ---LNSKGYT--KSIDIWSVGCILAEM 223
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
L + IG G +G + R E VAVK ++ + + EI + LRH NI+ +
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+T T L +V Y S G L++ + N + + +++G+ + H
Sbjct: 82 EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
+ HRD+K +N L+ +G+ A YS+ S+ + P VGT Y++PE
Sbjct: 135 -----QVCHRDLKLENTLL--DGSPAPRLKICAFGYSK-SSVLHSQPKSTVGTPAYIAPE 186
Query: 316 ILDESINMDCFESFKKADIYALGLVLW 342
+L + K AD+++ G+ L+
Sbjct: 187 VL-----LKKEYDGKVADVWSCGVTLY 208
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 107 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 160
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 161 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 212
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 213 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 91 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 145 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYR 196
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 197 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 239
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 91 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 145 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 197 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 239
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 139 SLSECIGKGRYG--EVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
L + IG G +G + R E VAVK ++ + + EI + LRH NI+ +
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+T T L +V Y S G L++ + N + + +++G+ + H
Sbjct: 82 EVILTP----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--- 134
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
+ HRD+K +N L+ +G+ A YS+ S+ + P VGT Y++PE
Sbjct: 135 -----QVCHRDLKLENTLL--DGSPAPRLKICAFGYSK-SSVLHSQPKDTVGTPAYIAPE 186
Query: 316 ILDESINMDCFESFKKADIYALGLVLW 342
+L + K AD+++ G+ L+
Sbjct: 187 VL-----LKKEYDGKVADVWSCGVTLY 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 68/242 (28%)
Query: 144 IGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRHE----NI 192
IG+G +G V++ G VAVK+ ++EAS + + L E NI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKML--KEEASADMQADFQREAALMAEFDNPNI 112
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT------LNHHQMM---------- 236
+ +G + C L+ Y ++G L + L + L+H +
Sbjct: 113 VKLLGVCAVGKPMC----LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 237 -------KICLS--IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL 287
++C++ + G+ +L F HRD+ ++N LV N IADFGL
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSERKF--------VHRDLATRNCLVGENMVVKIADFGL 220
Query: 288 -----AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
+ Y + IP R+M P ESI + + + ++D++A G+VLW
Sbjct: 221 SRNIYSADYYKADGNDAIP-------IRWMPP----ESIFYNRYTT--ESDVWAYGVVLW 267
Query: 343 EV 344
E+
Sbjct: 268 EI 269
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 90
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 145
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 146 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 201
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 202 ---LNSKGYT--KSIDIWSVGCILAEM 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 92/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 97 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 150
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 151 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 202
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 203 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V V G +AVK SR S Y + L +HEN++G +
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 117
Query: 198 --SDMTSRNSCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+ TS ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 118 VFTPATSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 173
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 174 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 218
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ DI+++G ++ E+
Sbjct: 219 APEIM-----LNWMHYNMTVDIWSVGCIMAEL 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 96
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 151
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 152 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 207
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 208 ---LNSKGYT--KSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 88
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 143
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 144 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 199
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 200 ---LNSKGYT--KSIDIWSVGCILAEM 221
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 91/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVKIF----FSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK +DE + E I S
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 117 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 170
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 171 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 222
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
SY + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 223 ASYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 265
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 108
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 163
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 164 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 219
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 220 ---LNSKGYT--KSIDIWSVGCILAEM 241
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 187 LRHENILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
L+HEN++G + + TS ++++LVT L + + L+ + + ++
Sbjct: 84 LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLR 142
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
GL ++H+ I HRD+K N+ V + I DFGLA + D
Sbjct: 143 GLKYIHS--------AGIIHRDLKPSNVAVNEDSELRILDFGLA-------RQADEEMTG 187
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
V T+ Y +PEI+ ++ + DI+++G ++ E+ +
Sbjct: 188 YVATRWYRAPEIM-----LNWMHYNQTVDIWSVGCIMAELLQ 224
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 30/210 (14%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+R+ ++LVTH L + + L + + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA--- 144
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K N+ V + I DFGLA D V T+ Y +PE
Sbjct: 145 -----DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATRWYRAPE 192
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
I+ ++ + DI+++G ++ E+
Sbjct: 193 IM-----LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHEN 191
+ + +G+G +G+V + +H G+ VA+KI ++ + E EI LLRH +
Sbjct: 16 QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
I+ D+ S ++ +V Y + L+D++ R ++ + + I++ + + H
Sbjct: 75 IIKLY--DVIK--SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ I HRD+K +N+L+ + IADFGL+ + N + G+
Sbjct: 130 --------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFL----KTSCGSPN 176
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW-EVCRR 347
Y +PE++ + + + D+++ G++L+ +CRR
Sbjct: 177 YAAPEVISGKLY-----AGPEVDVWSCGVILYVMLCRR 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH---GENVAVKIF----FSRDEASWSRETEIYSTVLLRHEN 191
+ + +G+G +G+V + +H G+ VA+KI ++ + E EI LLRH +
Sbjct: 17 QIVKTLGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLH 250
I+ D+ S ++ +V Y + L+D++ R ++ + + I++ + + H
Sbjct: 76 IIKLY--DVIK--SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 251 TEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKR 310
+ I HRD+K +N+L+ + IADFGL+ + N + G+
Sbjct: 131 --------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-GNFL----KTSCGSPN 177
Query: 311 YMSPEILDESINMDCFESFKKADIYALGLVLW-EVCRR 347
Y +PE++ + + + D+++ G++L+ +CRR
Sbjct: 178 YAAPEVISGKLY-----AGPEVDVWSCGVILYVMLCRR 210
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR---DEASWSRETEIYSTVL---- 186
+ K E +G G + EV V E K+F + +A +E+ I + +
Sbjct: 20 IKKIFEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNG 245
++HENI+ D+ S L+LV S G L+D + + + +++
Sbjct: 77 IKHENIVAL--EDIY--ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA 132
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GTCVIADFGLAVSYSQLSNKMDIPP 302
+ +LH + I HRD+K +N+L + +I+DFGL S++ K D+
Sbjct: 133 VYYLH--------RMGIVHRDLKPENLLYYSQDEESKIMISDFGL----SKMEGKGDVMS 180
Query: 303 NPRVGTKRYMSPEILDE---SINMDCF 326
GT Y++PE+L + S +DC+
Sbjct: 181 TA-CGTPGYVAPEVLAQKPYSKAVDCW 206
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD-- 199
+GKG +G+V G E A+KI +D + E + + +L +
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKIL-KKDVVIQDDDVE----CTMVEKRVLALLDKPPF 81
Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
+T +SC Q L+ V Y + G L H+ + Q + I GL LH
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH---- 137
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD-IPPNPRVGTKRYMS 313
K I +RD+K N+++ + G IADFG+ + MD + GT Y++
Sbjct: 138 ----KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM-----MDGVTTREFCGTPDYIA 188
Query: 314 PEILDESINMDCFESFKKA-DIYALGLVLWEV 344
PEI+ ++ + K+ D +A G++L+E+
Sbjct: 189 PEII-------AYQPYGKSVDWWAYGVLLYEM 213
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA+K + ++ + T EI + RHENI+G +D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
S K DI+++G +L E+
Sbjct: 204 LNSKGYT-----KSIDIWSVGCILAEM 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHENILGYIGSD 199
IG+G YG V + VA++ + ++ + T EI + RHENI+G +D
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI--ND 92
Query: 200 MTSRNSCTQLWLVTHYHSF--GSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQ 257
+ + Q+ V LY L L++ + I+ GL ++H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 147
Query: 258 GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL 317
+ HRD+K N+L+ T I DFGLA + V T+ Y +PEI+
Sbjct: 148 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF-LTEYVATRWYRAPEIM 203
Query: 318 DESINMDCFESFKKADIYALGLVLWEV 344
+N + K DI+++G +L E+
Sbjct: 204 ---LNSKGYT--KSIDIWSVGCILAEM 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 56/293 (19%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
+ + L E IG+G +GEV+ G +N V + R+ +A + +E I H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY--SH 171
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVN 244
NI+ IG CTQ +++V G L L ++++
Sbjct: 172 PNIVRLIG-------VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA 224
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+ +L ++ HRD+ ++N LV I+DFG+ S +
Sbjct: 225 GMEYLESK--------CCIHRDLAARNCLVTEKNVLKISDFGM--SREEADGVXAASGGL 274
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDL 364
R ++ +P E++N + S ++D+++ G++LWE F +PY +L
Sbjct: 275 RQVPVKWTAP----EALNYGRYSS--ESDVWSFGILLWET---------FSLGASPYPNL 319
Query: 365 VPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
S R+ + + P + +A+ ++M++CW R S
Sbjct: 320 -----SNQQTREFVEKGGRLP------CPELCPDAVFRLMEQCWAYEPGQRPS 361
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
IG G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 150 --------DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATRWYR 194
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+PEI+ ++ + DI+++G ++ E+
Sbjct: 195 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNAMHYNQTVDIWSVGCIMAEL 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 66/298 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRD------EASWSRETEIYSTVLLRH 189
+ + L E IG+G +GEV+ G +N V + R+ +A + +E I H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY--SH 171
Query: 190 ENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVN 244
NI+ IG CTQ +++V G L L ++++
Sbjct: 172 PNIVRLIG-------VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA 224
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS-----YSQLSNKMD 299
G+ +L ++ HRD+ ++N LV I+DFG++ Y+
Sbjct: 225 GMEYLESK--------CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ 276
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKA 359
+P ++ +P E++N + S ++D+++ G++LWE F +
Sbjct: 277 VP-------VKWTAP----EALNYGRYSS--ESDVWSFGILLWET---------FSLGAS 314
Query: 360 PYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLS 417
PY +L S R+ + + P + +A+ ++M++CW R S
Sbjct: 315 PYPNL-----SNQQTREFVEKGGRLP------CPELCPDAVFRLMEQCWAYEPGQRPS 361
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 147 --------DIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGYVATRWYR 191
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+PEI+ ++ + DI+++G ++ E+
Sbjct: 192 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 150 -------ADIIHRDLKPSNLAVNEDSELKILDFGLA-------RHTDDEMTGYVATRWYR 195
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+PEI+ ++ + DI+++G ++ E+
Sbjct: 196 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 19/85 (22%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVS-----YSQLSNKMDIPPNPRVGTKRYMSPEILD 318
HRD+K +NILV + + DFG+A + +QL N VGT Y +PE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--------VGTLYYXAPERFS 208
Query: 319 ESINMDCFESFKKADIYALGLVLWE 343
ES + +ADIYAL VL+E
Sbjct: 209 ES------HATYRADIYALTCVLYE 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 126/316 (39%), Gaps = 63/316 (19%)
Query: 133 TLA-KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSR--------ETEI 181
TLA +I + IGKG +G V +G V VA+K D + + E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
+ L H NI+ G +V + G LY L + +++
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCV-IADFGLAVSYSQL 294
L I G+ ++ + P I HRD++S NI +++ C +ADFGL+
Sbjct: 129 LDIALGIEYMQNQ------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS 182
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
+ + +G ++M+P E+I + +KAD Y+ ++L+ + G F
Sbjct: 183 VSGL-------LGNFQWMAP----ETIGAEEESYTEKADTYSFAMILYTIL---TGEGPF 228
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQ--RPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
+EY S+ ++ + I ++ RP +P + + V++ CW +
Sbjct: 229 DEY------------SYGKIKFINMIREEGLRPTIP-----EDCPPRLRNVIELCWSGDP 271
Query: 413 NVRLSALRVKKTLIKL 428
R + K L +L
Sbjct: 272 KKRPHFSYIVKELSEL 287
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+R+ ++LVTH L + + L + + I+ GL ++H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA--- 140
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K N+ V + I DFGLA D V T+ Y +PE
Sbjct: 141 -----DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYRAPE 188
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEV 344
I+ ++ + DI+++G ++ E+
Sbjct: 189 IM-----LNWMHYNQTVDIWSVGCIMAEL 212
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 99 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 154
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 155 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 199
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 200 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 141 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 185
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 186 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 212
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 30/210 (14%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+R+ ++LVTH L + + L + + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA--- 144
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K N+ V + I DFGLA D V T+ Y +PE
Sbjct: 145 -----DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYRAPE 192
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
I+ ++ + DI+++G ++ E+
Sbjct: 193 IM-----LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 41/257 (15%)
Query: 134 LAKQISLSECIGKGRYGEVW--RGVWHGENVAVK-IFFSRDEASWSRETEIYSTVLLRHE 190
+ K E +G G + EV+ + G+ A+K I S S E EI ++HE
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDH-LNRTTLNHHQMMKICLSIVNGLVHL 249
NI+ D+ S T +LV S G L+D L R + +++ + +L
Sbjct: 67 NIVTL--EDI--YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
H + I HRD+K +N+L T N +I DFGL S + + M +
Sbjct: 123 H--------ENGIVHRDLKPENLLYLTPEENSKIMITDFGL--SKMEQNGIM----STAC 168
Query: 307 GTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVC------RRTKANGIFEEYKA 359
GT Y++PE+L + + + KA D +++G++ + + + +FE+ K
Sbjct: 169 GTPGYVAPEVLAQ-------KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221
Query: 360 PYHDLVPMDPSFDDMRK 376
Y++ P +DD+ +
Sbjct: 222 GYYEF--ESPFWDDISE 236
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 32/212 (15%)
Query: 142 ECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL---RHENILGYI 196
+ +G G YG V V G VA+K + ++ + LL RHEN++G +
Sbjct: 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 197 G--SDMTSRNSCTQLWLVTHYHS--FGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTE 252
+ + + T +LV + G L H L ++ + ++ GL ++H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHA- 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA Q ++M V T+ Y
Sbjct: 147 -------AGIIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEM----XGXVVTRWYR 192
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PE++ ++ + DI+++G ++ E+
Sbjct: 193 APEVI-----LNWMRYTQTVDIWSVGCIMAEM 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 164
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 165 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 209
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 210 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 236
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 108 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 163
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 164 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 208
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 209 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 235
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 164
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 165 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGXVATRWYR 209
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 210 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 75/311 (24%)
Query: 137 QISLSECIGKGRYGEVWRGVWHG-------ENVAVKIFFSRDEASWSRETEIYSTVLLRH 189
++ L + +G+G +G+V G VAVK+ ++ A+ S + S +
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSEL---- 83
Query: 190 ENILGYIGSDMTSRN---SCTQ----LWLVTHYHSFGSLYDHLNRTTLNH--------HQ 234
IL +IG + N +CT+ L ++ + FG+L +L R+ N
Sbjct: 84 -KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKEAPED 141
Query: 235 MMKICLSIVNGLVHLHTEIFGTQ--GKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ K L++ + + + G + HRD+ ++NIL+ I DFGLA
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---- 197
Query: 293 QLSNKMDIPPNP---RVGTKR----YMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
DI +P R G R +M+PE I D + ++D+++ G++LWE
Sbjct: 198 -----RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI-------QSDVWSFGVLLWE- 244
Query: 345 CRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLNAMTKVM 404
IF +PY V +D F R++ + R D T M + M
Sbjct: 245 --------IFSLGASPYPG-VKIDEEF--CRRLKEGTRMR-------APDYTTPEMYQTM 286
Query: 405 KECWHQNANVR 415
+CWH + R
Sbjct: 287 LDCWHGEPSQR 297
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 150 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 195
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 196 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 100 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 155
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 156 --------DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATRWYR 200
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+PEI+ ++ + DI+++G ++ E+
Sbjct: 201 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 228
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEV-WRGVWHGENVAVKIFF------SRDEASWSRETEIY 182
+++L + + +G G G V ++G + G VAVK + E E++
Sbjct: 27 FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-- 84
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-----HHQMMK 237
H N++ Y S+ T R L L + L + N + N + +
Sbjct: 85 -----DHPNVIRYYCSETTDRFLYIALELCNL--NLQDLVESKNVSDENLKLQKEYNPIS 137
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIAD 284
+ I +G+ HLH+ I HRD+K +NILV T N +I+D
Sbjct: 138 LLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 189
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
FGL N GT + +PE+L+ES S DI+++G V + +
Sbjct: 190 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSI---DIFSMGCVFYYI 246
Query: 345 CRRTK 349
+ K
Sbjct: 247 LSKGK 251
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 205 SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAH 264
C + + H F D + R L + I I + L +LH + I H
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKL----ISNIMRQIFSALHYLHNQ--------GICH 191
Query: 265 RDIKSKNILVKTNGTCVI--ADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESIN 322
RDIK +N L TN + I DFGL+ + +L+N + GT +++PE+L+ +
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT-- 249
Query: 323 MDCFESF-KKADIYALGLVL 341
ES+ K D ++ G++L
Sbjct: 250 ---NESYGPKCDAWSAGVLL 266
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 140 LSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYSTVL-----LRH 189
L + +G+G +G V G E+ VAVK + + S RE E + + H
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM--KLDNSSQREIEEFLSEAACMKDFSH 95
Query: 190 ENILGYIGS--DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNH-------HQMMKICL 240
N++ +G +M+S+ + ++ + +G L+ +L + L ++K +
Sbjct: 96 PNVIRLLGVCIEMSSQG-IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDI 300
I G+ +L F HRD+ ++N +++ + T +ADFG LS K+
Sbjct: 155 DIALGMEYLSNRNF--------LHRDLAARNCMLRDDMTVCVADFG-------LSKKIYS 199
Query: 301 PPNPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVCRR 347
R G M + I ES+ + S K+D++A G+ +WE+ R
Sbjct: 200 GDYYRQGRIAKMPVKWIAIESLADRVYTS--KSDVWAFGVTMWEIATR 245
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 150 --------DIIHRDLKPSNLAVNEDXELKILDFGLA-------RHTDDEMTGYVATRWYR 194
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+PEI+ ++ + DI+++G ++ E+
Sbjct: 195 APEIM-----LNWMHYNQTVDIWSVGCIMAELL 222
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 140 LSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSR-----ETEIYSTVLLRHENI 192
+ E +G+G +G+V + + VA+K F SR S E EI LLRH +I
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALK-FISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIVNGLVHLHT 251
+ T T + +V Y G L+D++ + + + + I+ + + H
Sbjct: 72 IKLYDVITTP----TDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH- 125
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ I HRD+K +N+L+ N IADFGL+ + N + G+ Y
Sbjct: 126 -------RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD-GNFL----KTSCGSPNY 173
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+++ + + + D+++ G+VL+
Sbjct: 174 AAPEVINGKLY-----AGPEVDVWSCGIVLY 199
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 91/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 108 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 161
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 162 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 213
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
Y + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 214 AGYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 256
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 187 LRHENILGYIG--SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
L+HEN++G + + TS ++++LVT L + + L+ + + ++
Sbjct: 76 LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLLR 134
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
GL ++H+ I HRD+K N+ V + I DFGLA + D
Sbjct: 135 GLKYIHS--------AGIIHRDLKPSNVAVNEDCELRILDFGLA-------RQADEEMTG 179
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
V T+ Y +PEI+ ++ + DI+++G ++ E+ +
Sbjct: 180 YVATRWYRAPEIM-----LNWMHYNQTVDIWSVGCIMAELLQ 216
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 130 IQRTLAKQISLSECIGKGRYGEV-WRGVWHGENVAVKIFF------SRDEASWSRETEIY 182
+++L + + +G G G V ++G + G VAVK + E E++
Sbjct: 27 FEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-- 84
Query: 183 STVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-----HHQMMK 237
H N++ Y S+ T R L L + L + N + N + +
Sbjct: 85 -----DHPNVIRYYCSETTDRFLYIALELCNL--NLQDLVESKNVSDENLKLQKEYNPIS 137
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT-------------NGTCVIAD 284
+ I +G+ HLH+ I HRD+K +NILV T N +I+D
Sbjct: 138 LLRQIASGVAHLHSL--------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 189
Query: 285 FGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
FGL N GT + +PE+L+ES S DI+++G V + +
Sbjct: 190 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSI---DIFSMGCVFYYI 246
Query: 345 CRRTK 349
+ K
Sbjct: 247 LSKGK 251
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 91/236 (38%), Gaps = 54/236 (22%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGE-------NVAVK----IFFSRDEASWSRETEIYST 184
K I+L +G G +GEV+ G G VAVK + +DE + E I S
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQ--------MM 236
H+NI+ IG + S L L+ G L L T Q ++
Sbjct: 131 --FNHQNIVRCIGVSLQSLPRFILLELMAG----GDLKSFLRETRPRPSQPSSLAMLDLL 184
Query: 237 KICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG---TCVIADFGLA----- 288
+ I G +L F HRDI ++N L+ G I DFG+A
Sbjct: 185 HVARDIACGCQYLEENHF--------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 236
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
Y + +P ++M PE E I F S K D ++ G++LWE+
Sbjct: 237 AGYYRKGGCAMLP-------VKWMPPEAFMEGI----FTS--KTDTWSFGVLLWEI 279
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 139 SLSECIGKGRYGEVWR--GVWHGENVAVKI-----FFSRDEASWSRETEIYSTVLLRHEN 191
L E +GKG + V R V G+ A KI +RD RE I LL+H N
Sbjct: 25 QLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARI--CRLLKHPN 82
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVNGLVHLH 250
I+ D S +L+ + G L+ D + R + I+ ++H H
Sbjct: 83 IVRL--HDSISEEG--HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 251 TEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG 307
+ + HRD+K +N+L+ K G V +ADFGLA+ G
Sbjct: 139 --------QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW----FGFAG 186
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
T Y+SPE+L + K D++A G++L+
Sbjct: 187 TPGYLSPEVLRKD------PYGKPVDLWACGVILY 215
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGXVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 41/159 (25%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPEI 316
HRD+ ++NIL+ N I DFGLA DI NP R G R +M+PE
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLA---------RDIYKNPDYVRKGDTRLPLKWMAPES 272
Query: 317 LDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRK 376
+ + I K+D+++ G++LWE IF +PY V MD F
Sbjct: 273 IFDKIYS------TKSDVWSYGVLLWE---------IFSLGGSPYPG-VQMDEDF----- 311
Query: 377 VICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
+ R + R ST + ++M +CWH++ R
Sbjct: 312 ---CSRLREGMRMRAPEYST-PEIYQIMLDCWHRDPKER 346
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
E IG+G YG V++ +GE A+K + +E E + +R +IL +
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKEL---- 57
Query: 201 TSRNSCTQLWLVTHYHSFGSL-YDHLNRTTLNHHQMMKIC-------------LSIVNGL 246
++ +L+ V H L ++HL++ + +++ +C L ++NG+
Sbjct: 58 -KHSNIVKLYDVIHTKKRLVLVFEHLDQ---DLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H + HRD+K +N+L+ G IADFGLA ++ K V
Sbjct: 114 AYCHDR--------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY----THEV 161
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
T Y +P++L M + DI+++G + E+ T
Sbjct: 162 VTLWYRAPDVL-----MGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 133 TLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKI-----FFSRDEASWSRETEIYSTV 185
++ + L E +GKG + V R + G+ A KI +RD RE I
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI--CR 58
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVN 244
LL+H NI+ D S +LV + G L+ D + R + I+
Sbjct: 59 LLKHPNIVRL--HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIP 301
+ H H I HRD+K +N+L+ K+ G V +ADFGLA+
Sbjct: 115 SVNHCHLN--------GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW--- 163
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
GT Y+SPE+L + K D++A G++L+
Sbjct: 164 -FGFAGTPGYLSPEVLRKD------PYGKPVDMWACGVILY 197
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 151
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA +++M V T+ Y
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM----TGYVATRWYR 196
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 141 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMAGFVATRWYR 185
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 186 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 212
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 147 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 191
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 192 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 151
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 196
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 151
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA +++M V T+ Y
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM----TGYVATRWYR 196
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 86 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 141
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 142 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 186
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 187 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 213
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 150 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 194
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 195 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 221
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 86 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 141
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 142 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 186
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 187 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 213
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 143
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 144 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 85 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 141 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 185
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 186 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 212
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 30/210 (14%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+R+ ++LVTH L + + L + + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA--- 144
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
I HRD+K N+ V + I DFGL D V T+ Y +PE
Sbjct: 145 -----DIIHRDLKPSNLAVNEDSELKILDFGLC-------RHTDDEMTGYVATRWYRAPE 192
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
I+ ++ + DI+++G ++ E+
Sbjct: 193 IM-----LNWMHYNQTVDIWSVGCIMAELL 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 96 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 151
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA +++M V T+ Y
Sbjct: 152 --------DIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM----TGYVATRWYR 196
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 197 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 94 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 150 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 194
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 195 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 88 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 143
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 144 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 188
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 189 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 215
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 147 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 191
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 192 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 218
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 87 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 142
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 143 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 187
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 188 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 214
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 156
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 157 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 201
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 202 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 156
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 157 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 201
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 202 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 228
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 63/235 (26%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGEN--VAVKIFF------SRDEASWSRETEIYS 183
++ AK+ + +G+G++ V++ N VA+K ++D + + EI
Sbjct: 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65
Query: 184 TVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL----------NRTTLNHH 233
L H NI+G + + H + ++D + N L
Sbjct: 66 LQELSHPNIIGLLDA-------------FGHKSNISLVFDFMETDLEVIIKDNSLVLTPS 112
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQ 293
+ L + GL +LH I HRD+K N+L+ NG +ADFGLA S+
Sbjct: 113 HIKAYMLMTLQGLEYLHQHW--------ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
Query: 294 LSNKMDIPPNP----RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
PN +V T+ Y +PE+L A +Y +G+ +W V
Sbjct: 165 --------PNRAYXHQVVTRWYRAPELL------------FGARMYGVGVDMWAV 199
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 100 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 154
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 155 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 200
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 201 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 150 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 195
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 196 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 91 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 146
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 147 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 191
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 192 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 109 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 164
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 165 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 209
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 210 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 108 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 163
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 164 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 208
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 209 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 235
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 133 TLAKQISLSECIGKGRYGEVWR--GVWHGENVAVKI-----FFSRDEASWSRETEIYSTV 185
++ + L E +GKG + V R + G+ A KI +RD RE I
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARI--CR 58
Query: 186 LLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVN 244
LL+H NI+ D S +LV + G L+ D + R + I+
Sbjct: 59 LLKHPNIVRL--HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIP 301
+ H H I HRD+K +N+L+ K+ G V +ADFGLA+
Sbjct: 115 SVNHCHLN--------GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW--- 163
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
GT Y+SPE+L + D + K D++A G++L+
Sbjct: 164 -FGFAGTPGYLSPEVLRK----DPYG--KPVDMWACGVILY 197
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 112 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 167
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 168 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 212
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 213 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 239
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
E IG+G YG V++ +GE A+K + +E E + +R +IL +
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKEL---- 57
Query: 201 TSRNSCTQLWLVTHYHSFGSL-YDHLNRTTLNHHQMMKIC-------------LSIVNGL 246
++ +L+ V H L ++HL++ + +++ +C L ++NG+
Sbjct: 58 -KHSNIVKLYDVIHTKKRLVLVFEHLDQ---DLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H + HRD+K +N+L+ G IADFGLA ++ K +
Sbjct: 114 AYCHDR--------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY----THEI 161
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
T Y +P++L M + DI+++G + E+ T
Sbjct: 162 VTLWYRAPDVL-----MGSKKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 95 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 149
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 150 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 195
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 196 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 40/233 (17%)
Query: 134 LAKQISLSECIGKGRYGEV--WRGVWHGENVAVK-IFFSRDEASWSRET--EIYSTVLLR 188
+ + + E IG G YG V R G+ VA+K I + D + ++ T E+ +
Sbjct: 53 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK 112
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK----------- 237
H+NI+ D+ L Y F S+Y L+ + HQ++
Sbjct: 113 HDNIIAI--KDI--------LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 162
Query: 238 -ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSN 296
++ GL ++H+ + HRD+K N+LV N I DFG+A
Sbjct: 163 YFLYQLLRGLKYMHSA--------QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK 349
+ V T+ Y +PE++ + E + D++++G + E+ R +
Sbjct: 215 EHQYFMTEYVATRWYRAPELM-----LSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 112 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHS- 166
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 167 -------ADIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMXGYVATRWYR 212
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 213 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + IG G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G +ADFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 46/219 (21%)
Query: 142 ECIGKGRYGEVWRGVW-HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSDM 200
E IG+G YG V++ +GE A+K + +E E + +R +IL +
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKEL---- 57
Query: 201 TSRNSCTQLWLVTHYHSFGSL-YDHLNRTTLNHHQMMKIC-------------LSIVNGL 246
++ +L+ V H L ++HL++ + +++ +C L ++NG+
Sbjct: 58 -KHSNIVKLYDVIHTKKRLVLVFEHLDQ---DLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+ H + HRD+K +N+L+ G IADFGLA ++ K V
Sbjct: 114 AYCHDR--------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY----THEV 161
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
T Y +P++L M + DI+++G + E+
Sbjct: 162 VTLWYRAPDVL-----MGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + IG G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G +ADFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 40/225 (17%)
Query: 142 ECIGKGRYGEV--WRGVWHGENVAVK-IFFSRDEASWSRET--EIYSTVLLRHENILGYI 196
E IG G YG V R G+ VA+K I + D + ++ T E+ +H+NI+
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI- 118
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK------------ICLSIVN 244
D+ L Y F S+Y L+ + HQ++ ++
Sbjct: 119 -KDI--------LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
GL ++H+ + HRD+K N+LV N I DFG+A +
Sbjct: 170 GLKYMHSA--------QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 305 RVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTK 349
V T+ Y +PE++ + E + D++++G + E+ R +
Sbjct: 222 YVATRWYRAPELM-----LSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 129/330 (39%), Gaps = 80/330 (24%)
Query: 136 KQISLSECIGKGRYGEV-------WRGVWHGENVAVKIFFSRDEASWSRE--TEIYSTVL 186
K + L + +G+G +G+V +G VAVK+ S R+ +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSL---------------------- 221
+ H +++ G+ C+Q L L+ Y +GSL
Sbjct: 83 VNHPHVIKLYGA-------CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 222 ---YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
DH + L ++ I G+ +L + ++ HRD+ ++NILV
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL--------AEMSLVHRDLAARNILVAEGR 187
Query: 279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
I+DFGL+ + + + R+ K +M+ E L + I ++D+++ G
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQG-RIPVK-WMAIESLFDHIYT------TQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE+ N PY +P + F+ ++ +RP D+
Sbjct: 240 VLLWEIV-TLGGN--------PYPG-IPPERLFNLLK--TGHRMERP--------DNCSE 279
Query: 399 AMTKVMKECWHQNANVRLSALRVKKTLIKL 428
M ++M +CW Q + R + K L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 63/316 (19%)
Query: 133 TLA-KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSR--------ETEI 181
TLA +I + IGKG +G V +G V VA+K D + + E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
+ L H NI+ G +V + G LY L + +++
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCV-IADFGLAVSYSQL 294
L I G+ ++ + P I HRD++S NI +++ C +ADFG +
Sbjct: 129 LDIALGIEYMQNQ------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS 182
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
+ + +G ++M+P E+I + +KAD Y+ ++L+ + G F
Sbjct: 183 VSGL-------LGNFQWMAP----ETIGAEEESYTEKADTYSFAMILYTIL---TGEGPF 228
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQ--RPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
+EY S+ ++ + I ++ RP +P + + V++ CW +
Sbjct: 229 DEY------------SYGKIKFINMIREEGLRPTIP-----EDCPPRLRNVIELCWSGDP 271
Query: 413 NVRLSALRVKKTLIKL 428
R + K L +L
Sbjct: 272 KKRPHFSYIVKELSEL 287
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + IG G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G +ADFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
+L+L+ + G L+ L++ + + +K L+ + L HLH+ I +RD
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--------LGIIYRD 151
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
+K +NIL+ G + DFGL S+ S + GT YM+PE+++ +
Sbjct: 152 LKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS- 206
Query: 327 ESFKKADIYALGLVLWEVCRRT 348
AD ++ G++++E+ T
Sbjct: 207 -----ADWWSFGVLMFEMLTGT 223
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
+L+L+ + G L+ L++ + + +K L+ + L HLH+ I +RD
Sbjct: 101 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--------LGIIYRD 152
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
+K +NIL+ G + DFGL S+ S + GT YM+PE+++ +
Sbjct: 153 LKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS- 207
Query: 327 ESFKKADIYALGLVLWEVCRRT 348
AD ++ G++++E+ T
Sbjct: 208 -----ADWWSFGVLMFEMLTGT 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
+L+L+ + G L+ L++ + + +K L+ + L HLH+ I +RD
Sbjct: 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS--------LGIIYRD 151
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCF 326
+K +NIL+ G + DFGL S+ S + GT YM+PE+++ +
Sbjct: 152 LKPENILLDEEGHIKLTDFGL----SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS- 206
Query: 327 ESFKKADIYALGLVLWEVCRRT 348
AD ++ G++++E+ T
Sbjct: 207 -----ADWWSFGVLMFEMLTGT 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 21/122 (17%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
H+ + + + I GL LH E I +RD+K +NIL+ +G I+
Sbjct: 277 HMGQAGFPEARAVFYAAEICCGLEDLHRE--------RIVYRDLKPENILLDDHGHIRIS 328
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLW 342
D GLAV + RVGT YM+PE++ +E D +ALG +L+
Sbjct: 329 DLGLAVHVPEGQTIKG-----RVGTVGYMAPEVVKNERYTFS-------PDWWALGCLLY 376
Query: 343 EV 344
E+
Sbjct: 377 EM 378
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 52/284 (18%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIF----FSRDEASWSRETEIYSTVLLRHENILGYIG 197
+GKG +G+V R G+ AVK+ +D+ TE L R+ L +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL- 89
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGT 256
+ +L+ V + + G L H+ ++ + + I++ L+ LH +
Sbjct: 90 --FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---- 143
Query: 257 QGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEI 316
I +RD+K N+L+ G C +ADFG+ + N + GT Y++PEI
Sbjct: 144 ----GIIYRDLKLDNVLLDHEGHCKLADFGMC--KEGICNG--VTTATFCGTPDYIAPEI 195
Query: 317 LDESINMDCFESFKKADIYALGLVLWE-VCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
L E + D +A+G++L+E +C AP+ + DD+
Sbjct: 196 LQEMLYG------PAVDWWAMGVLLYEMLCGH-----------APFE-----AENEDDLF 233
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVRLSAL 419
+ I D+ V+ W+ + T ++K +N +RL +L
Sbjct: 234 EAILNDE---VVYPTWLHEDA----TGILKSFMTKNPTMRLGSL 270
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I D+GLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDYGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 63/316 (19%)
Query: 133 TLA-KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSR--------ETEI 181
TLA +I + IGKG +G V +G V VA+K D + + E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 182 YSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKIC 239
+ L H NI+ G +V + G LY L + +++
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT----NGTCV-IADFGLAVSYSQL 294
L I G+ ++ + P I HRD++S NI +++ C +ADF L+
Sbjct: 129 LDIALGIEYMQNQ------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS 182
Query: 295 SNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIF 354
+ + +G ++M+P E+I + +KAD Y+ ++L+ + G F
Sbjct: 183 VSGL-------LGNFQWMAP----ETIGAEEESYTEKADTYSFAMILYTIL---TGEGPF 228
Query: 355 EEYKAPYHDLVPMDPSFDDMRKVICIDQQ--RPVLPNRWVSDSTLNAMTKVMKECWHQNA 412
+EY S+ ++ + I ++ RP +P + + V++ CW +
Sbjct: 229 DEY------------SYGKIKFINMIREEGLRPTIP-----EDCPPRLRNVIELCWSGDP 271
Query: 413 NVRLSALRVKKTLIKL 428
R + K L +L
Sbjct: 272 KKRPHFSYIVKELSEL 287
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 263 AHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESIN 322
HRDIK N+L+ NG +ADFG S ++++ + + VGT Y+SPEIL +++
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFG---SCLKMNDDGTVQSSVAVGTPDYISPEIL-QAME 252
Query: 323 MDCFESFKKADIYALGLVLWEV 344
+ + D ++LG+ ++E+
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEM 274
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 35/215 (16%)
Query: 139 SLSECIGKGRYGEVWRGV-------WHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
L E +GKG + V R V + + + K +RD RE I LL+H N
Sbjct: 34 QLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICR--LLKHPN 91
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVNGLVHLH 250
I+ D S +LV + G L+ D + R + I+ + H+H
Sbjct: 92 IVRL--HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 251 TEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG 307
I HRD+K +N+L+ K G V +ADFGLA+ G
Sbjct: 148 QH--------DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW----FGFAG 195
Query: 308 TKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
T Y+SPE+L + K DI+A G++L+
Sbjct: 196 TPGYLSPEVLRKD------PYGKPVDIWACGVILY 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK S+ S Y + L +HEN++G +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKL-SKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 101 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 156
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DFGLA D V T+ Y
Sbjct: 157 --------DIIHRDLKPSNLAVNEDCELKILDFGLA-------RHTDDEMTGYVATRWYR 201
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 202 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + EI T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+++ G + DFGLA + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
HRDIK N+L+ NG +ADFG S ++++ + + VGT Y+SPEIL +++
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFG---SCLKMNDDGTVQSSVAVGTPDYISPEIL-QAMED 269
Query: 324 DCFESFKKADIYALGLVLWEV 344
+ + D ++LG+ ++E+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEM 290
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 69/142 (48%), Gaps = 25/142 (17%)
Query: 208 QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
+L+L+ + G L+ L++ + + +K L+ + GL HLH+ I +RD
Sbjct: 104 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS--------LGIIYRD 155
Query: 267 IKSKNILVKTNGTCVIADFGL---AVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINM 323
+K +NIL+ G + DFGL A+ + + + GT YM+PE+++ +
Sbjct: 156 LKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF-------CGTVEYMAPEVVNRQGHS 208
Query: 324 DCFESFKKADIYALGLVLWEVC 345
AD ++ G++++E+
Sbjct: 209 HS------ADWWSYGVLMFEML 224
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + EI T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKEIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+++ G + DFGLA + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y G ++ HL R + IV +LH+ + +R
Sbjct: 115 SNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 166
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G +ADFG A + + GT Y++PE IL + N
Sbjct: 167 DLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 217
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 218 -----KAVDWWALGVLIYEMA 233
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 21/122 (17%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
H+ + + + I GL LH E I +RD+K +NIL+ +G I+
Sbjct: 277 HMGQAGFPEARAVFYAAEICCGLEDLHRE--------RIVYRDLKPENILLDDHGHIRIS 328
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEIL-DESINMDCFESFKKADIYALGLVLW 342
D GLAV + RVGT YM+PE++ +E D +ALG +L+
Sbjct: 329 DLGLAVHVPEGQTIKG-----RVGTVGYMAPEVVKNERYTFS-------PDWWALGCLLY 376
Query: 343 EV 344
E+
Sbjct: 377 EM 378
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
A+ + + IG+G +GEV + V H + K++ + + + S +I+
Sbjct: 74 AEDYDVVKVIGRGAFGEV-QLVRH--KASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 195 YIGSDMTSRNSCT-----QLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
+ S + C L++V Y G L + ++ + +V L +
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAI 190
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + HRD+K N+L+ +G +ADFG + + + + VGT
Sbjct: 191 HSM--------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM---VHCDTAVGTP 239
Query: 310 RYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
Y+SPE+L +S D + ++ D +++G+ L+E+
Sbjct: 240 DYISPEVL-KSQGGDGYYG-RECDWWSVGVFLFEM 272
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 208 QLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
+ +LV GS+ H++ R N + + + + L LH + IAHRD
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK--------GIAHRD 136
Query: 267 IKSKNILVKTNGTCV---IADFGLAVSYSQLSNKMDIPPNPRV----GTKRYMSPEILDE 319
+K +NIL + I DFGL S +L+ P + G+ YM+PE++ E
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLG-SGIKLNGDCSPISTPELLTPCGSAEYMAPEVV-E 194
Query: 320 SINMDCFESFKKADIYALGLVLW 342
+ + + K+ D+++LG++L+
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILY 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 128/330 (38%), Gaps = 80/330 (24%)
Query: 136 KQISLSECIGKGRYGEV-------WRGVWHGENVAVKIFFSRDEASWSRE--TEIYSTVL 186
K + L + +G+G +G+V +G VAVK+ S R+ +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSL---------------------- 221
+ H +++ G+ C+Q L L+ Y +GSL
Sbjct: 83 VNHPHVIKLYGA-------CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 222 ---YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
DH + L ++ I G+ +L + + HRD+ ++NILV
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL--------AEMKLVHRDLAARNILVAEGR 187
Query: 279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
I+DFGL+ + + + R+ K +M+ E L + I ++D+++ G
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQG-RIPVK-WMAIESLFDHIYT------TQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE+ N PY +P + F+ ++ +RP D+
Sbjct: 240 VLLWEIV-TLGGN--------PYPG-IPPERLFNLLK--TGHRMERP--------DNCSE 279
Query: 399 AMTKVMKECWHQNANVRLSALRVKKTLIKL 428
M ++M +CW Q + R + K L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 129/339 (38%), Gaps = 68/339 (20%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVL-------- 186
+ Q E +G G Y V++G+ N ++ + E E ST +
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGL----NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKE 59
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICL----- 240
L+HENI+ T +L LV + L +++ RT N + +++ L
Sbjct: 60 LKHENIVRLYDVIHTE----NKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 241 -SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
++ GL H I HRD+K +N+L+ G + DFGLA ++
Sbjct: 115 WQLLQGLAFCHEN--------KILHRDLKPQNLLINKRGQLKLGDFGLARAFG------- 159
Query: 300 IPPN---PRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR---------- 346
IP N V T Y +P++L M DI++ G +L E+
Sbjct: 160 IPVNTFSSEVVTLWYRAPDVL-----MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
Query: 347 RTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWV-SDSTLNAMTKVMK 405
+ IF+ P L PS + K QQRP R V T + +
Sbjct: 215 EEQLKLIFDIMGTPNESLW---PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLM 271
Query: 406 ECWHQ----NANVRLSALRVKKTLIKLACADMYIHCSDG 440
+ H N ++RLSA K+ L A+ Y H S G
Sbjct: 272 DFLHGLLQLNPDMRLSA---KQALHHPWFAEYYHHASMG 307
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 39/214 (18%)
Query: 140 LSECIGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYSTVLLR---HENILG 194
+ E IG G Y E R V N+ AVK+ + + S E EI LLR H NI+
Sbjct: 31 VKETIGVGSYSECKRCVHKATNMEYAVKVI-DKSKRDPSEEIEI----LLRYGQHPNII- 84
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLV-HLHTEI 253
+ + ++LVT G L D + R + L + V +LH++
Sbjct: 85 ---TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ- 140
Query: 254 FGTQGKPAIAHRDIKSKNILV---KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ HRD+K NIL N C+ I DFG A QL + + P T
Sbjct: 141 -------GVVHRDLKPSNILYVDESGNPECLRICDFGFA---KQLRAENGLLMTP-CYTA 189
Query: 310 RYMSPEILD-ESINMDCFESFKKADIYALGLVLW 342
+++PE+L + + C DI++LG++L+
Sbjct: 190 NFVAPEVLKRQGYDEGC-------DIWSLGILLY 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 85/210 (40%), Gaps = 33/210 (15%)
Query: 144 IGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRET---EIYSTVLLRHENILGYIGS 198
IG+G YG V+ R G+ VA+K F ++ ++ EI L+H N++ +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 199 DMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNH--HQMMKICLSIVNGLVHLHTEIF 254
R +L LV Y H+ D R H + L VN H H I
Sbjct: 71 FRRKR----RLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVN-FCHKHNCI- 124
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
HRD+K +NIL+ + + DFG A + S+ D V T+ Y SP
Sbjct: 125 ---------HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD----DEVATRWYRSP 171
Query: 315 EILDESINMDCFESFKKADIYALGLVLWEV 344
E+L D++A+G V E+
Sbjct: 172 ELLVGDTQYG-----PPVDVWAIGCVFAEL 196
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 39/214 (18%)
Query: 140 LSECIGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYSTVLLR---HENILG 194
+ E IG G Y E R V N+ AVK+ + + S E EI LLR H NI+
Sbjct: 31 VKETIGVGSYSECKRCVHKATNMEYAVKVI-DKSKRDPSEEIEI----LLRYGQHPNII- 84
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLV-HLHTEI 253
+ + ++LVT G L D + R + L + V +LH++
Sbjct: 85 ---TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ- 140
Query: 254 FGTQGKPAIAHRDIKSKNILV---KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ HRD+K NIL N C+ I DFG A QL + + P T
Sbjct: 141 -------GVVHRDLKPSNILYVDESGNPECLRICDFGFA---KQLRAENGLLMTP-CYTA 189
Query: 310 RYMSPEILD-ESINMDCFESFKKADIYALGLVLW 342
+++PE+L + + C DI++LG++L+
Sbjct: 190 NFVAPEVLKRQGYDEGC-------DIWSLGILLY 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 38/213 (17%)
Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD-- 199
+GKG +G+V G E AVKI +D + E + + +L G
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKIL-KKDVVIQDDDVE----CTMVEKRVLALPGKPPF 82
Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
+T +SC Q L+ V Y + G L H+ + + I GL L ++
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-- 140
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS--YSQLSNKMDIPPNPRVGTKRYM 312
I +RD+K N+++ + G IADFG+ + ++ K GT Y+
Sbjct: 141 ------GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX------FCGTPDYI 188
Query: 313 SPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
+PEI+ ++ + K+ D +A G++L+E+
Sbjct: 189 APEII-------AYQPYGKSVDWWAFGVLLYEM 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 128/330 (38%), Gaps = 80/330 (24%)
Query: 136 KQISLSECIGKGRYGEV-------WRGVWHGENVAVKIFFSRDEASWSRE--TEIYSTVL 186
K + L + +G+G +G+V +G VAVK+ S R+ +E
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 187 LRHENILGYIGSDMTSRNSCTQ---LWLVTHYHSFGSL---------------------- 221
+ H +++ G+ C+Q L L+ Y +GSL
Sbjct: 83 VNHPHVIKLYGA-------CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 222 ---YDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNG 278
DH + L ++ I G+ +L + + HRD+ ++NILV
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL--------AEMKLVHRDLAARNILVAEGR 187
Query: 279 TCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALG 338
I+DFGL+ + + + R+ K +M+ E L + I ++D+++ G
Sbjct: 188 KMKISDFGLSRDVYEEDSYVKRSQG-RIPVK-WMAIESLFDHIYT------TQSDVWSFG 239
Query: 339 LVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTLN 398
++LWE+ N PY +P + F+ ++ +RP D+
Sbjct: 240 VLLWEIV-TLGGN--------PYPG-IPPERLFNLLK--TGHRMERP--------DNCSE 279
Query: 399 AMTKVMKECWHQNANVRLSALRVKKTLIKL 428
M ++M +CW Q + R + K L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------AGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 178 ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD----HLNRTTLNHH 233
+ E++ + L H NI+ Y + + +LW+VT + ++GS D H +N
Sbjct: 58 QGELHVSKLFNHPNIVPYRATFIADN----ELWVVTSFMAYGSAKDLICTHF-MDGMNEL 112
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-----A 288
+ I ++ L ++H + HR +K+ +IL+ +G ++ GL
Sbjct: 113 AIAYILQGVLKALDYIHHMGY--------VHRSVKASHILISVDGKVYLS--GLRSNLSM 162
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
+S+ Q + P V ++SPE+L + N+ +++ K+DIY++G+ E+
Sbjct: 163 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ--NLQGYDA--KSDIYSVGITACEL---- 214
Query: 349 KANGIFEEYKAPYHDL 364
ANG P+ D+
Sbjct: 215 -ANG-----HVPFKDM 224
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 38/196 (19%)
Query: 178 ETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYD----HLNRTTLNHH 233
+ E++ + L H NI+ Y + + +LW+VT + ++GS D H +N
Sbjct: 74 QGELHVSKLFNHPNIVPYRATFIADN----ELWVVTSFMAYGSAKDLICTHF-MDGMNEL 128
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGL-----A 288
+ I ++ L ++H + HR +K+ +IL+ +G ++ GL
Sbjct: 129 AIAYILQGVLKALDYIHHMGY--------VHRSVKASHILISVDGKVYLS--GLRSNLSM 178
Query: 289 VSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRRT 348
+S+ Q + P V ++SPE+L + N+ +++ K+DIY++G+ E+
Sbjct: 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ--NLQGYDA--KSDIYSVGITACEL---- 230
Query: 349 KANGIFEEYKAPYHDL 364
ANG P+ D+
Sbjct: 231 -ANG-----HVPFKDM 240
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 28/223 (12%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
R + + + IG+G +GEV V +N A K+F + W + +
Sbjct: 70 RLHREDFEILKVIGRGAFGEV--AVVKLKN-ADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 192 IL-----GYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLN-HHQMMKICLS---- 241
+L +I + + L+LV Y+ G L L++ +M + L+
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 242 IVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIP 301
++ + LH HRDIK NIL+ NG +ADFG S +L +
Sbjct: 187 AIDSVHQLH-----------YVHRDIKPDNILMDMNGHIRLADFG---SCLKLMEDGTVQ 232
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ VGT Y+SPEIL +++ + D ++LG+ ++E+
Sbjct: 233 SSVAVGTPDYISPEIL-QAMEGGKGRYGPECDWWSLGVCMYEM 274
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------XGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 31/210 (14%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V + GE VA+K SR S Y +LL +HEN++G +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 198 --SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+ +S + +LV + + + + ++ + ++ GL ++H+
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQ--TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA--- 163
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
+ HRD+K N+ V + I DFGLA D V T+ Y +PE
Sbjct: 164 -----GVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEMTGYVVTRWYRAPE 211
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
++ ++ + + DI+++G ++ E+
Sbjct: 212 VILSWMHYN-----QTVDIWSVGCIMAEML 236
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I DF LA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDFYLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 31/210 (14%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V + GE VA+K SR S Y +LL +HEN++G +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 198 --SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+ +S + +LV + + + + ++ + ++ GL ++H+
Sbjct: 91 VFTPASSLRNFYDFYLVMPF--MQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA--- 145
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
+ HRD+K N+ V + I DFGLA D V T+ Y +PE
Sbjct: 146 -----GVVHRDLKPGNLAVNEDCELKILDFGLA-------RHADAEMTGYVVTRWYRAPE 193
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVC 345
++ ++ + + DI+++G ++ E+
Sbjct: 194 VILSWMHYN-----QTVDIWSVGCIMAEML 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 50/227 (22%)
Query: 138 ISLSECIGKGRYGEVWRG---VWHGENVAVKI------FFSRDEASWSRETEIYSTVLLR 188
I + IG G +GEV G + +VAV I + + + E I
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQ--FD 102
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR--TTLNHHQMMKICLSIVNGL 246
H N++ G + +R + +V + G+L L + Q++ + I G+
Sbjct: 103 HPNVVHLEG--VVTRGK--PVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--------VSYSQLSNKM 298
+L HRD+ ++NILV +N C ++DFGL+ Y+ K+
Sbjct: 159 RYL--------ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI 210
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
+ R+ +PE + + F A D+++ G+V+WEV
Sbjct: 211 PV---------RWTAPEAIQ-------YRKFTSASDVWSYGIVMWEV 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 43/160 (26%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
HRD+ ++NIL+ I DFGLA DI +P R G R +M+PE
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 264
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
I D + ++D+++ G++LWE IF +PY V +D F R
Sbjct: 265 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEF--CR 305
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
++ + R D T M + M +CWH + R
Sbjct: 306 RLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQR 338
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 43/160 (26%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
HRD+ ++NIL+ I DFGLA DI +P R G R +M+PE
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 266
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
I D + ++D+++ G++LWE IF +PY V +D F R
Sbjct: 267 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEF--CR 307
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
++ + R D T M + M +CWH + R
Sbjct: 308 RLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQR 340
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I FGLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILGFGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 147
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 200
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 201 GYN-------KAVDWWALGVLIYEMA 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 38/213 (17%)
Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIGSD-- 199
+GKG +G+V G E AVKI +D + E + + +L G
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKIL-KKDVVIQDDDVE----CTMVEKRVLALPGKPPF 403
Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
+T +SC Q L+ V Y + G L H+ + + I GL L ++
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-- 461
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVS--YSQLSNKMDIPPNPRVGTKRYM 312
I +RD+K N+++ + G IADFG+ + ++ K GT Y+
Sbjct: 462 ------GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX------FCGTPDYI 509
Query: 313 SPEILDESINMDCFESFKKA-DIYALGLVLWEV 344
+PEI+ ++ + K+ D +A G++L+E+
Sbjct: 510 APEII-------AYQPYGKSVDWWAFGVLLYEM 535
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 18/110 (16%)
Query: 234 QMMK-ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
Q++K I S++N ++H E I HRD+K NIL+ NG ++DFG
Sbjct: 151 QVIKCIIKSVLNSFSYIHNE-------KNICHRDVKPSNILMDKNGRVKLSDFG------ 197
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
+ +D GT +M PE + + K DI++LG+ L+
Sbjct: 198 ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNG----AKVDIWSLGICLY 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 43/160 (26%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
HRD+ ++NIL+ I DFGLA DI +P R G R +M+PE
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 273
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
I D + ++D+++ G++LWE IF +PY V +D F R
Sbjct: 274 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEF--CR 314
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
++ + R D T M + M +CWH + R
Sbjct: 315 RLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQR 347
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y + G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 186
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL-------CGTPEYLAPEIILSKGYN-- 237
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 238 -----KAVDWWALGVLIYEMA 253
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 217 -----KAVDWWALGVLIYEMA 232
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 115 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 166
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 217
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 218 -----KAVDWWALGVLIYEMA 233
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 43/160 (26%)
Query: 264 HRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP---RVGTKR----YMSPE- 315
HRD+ ++NIL+ I DFGLA DI +P R G R +M+PE
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPET 271
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
I D + ++D+++ G++LWE IF +PY V +D F R
Sbjct: 272 IFDRVYTI-------QSDVWSFGVLLWE---------IFSLGASPYPG-VKIDEEF--CR 312
Query: 376 KVICIDQQRPVLPNRWVSDSTLNAMTKVMKECWHQNANVR 415
++ + R D T M + M +CWH + R
Sbjct: 313 RLKEGTRMR-------APDYTTPEMYQTMLDCWHGEPSQR 345
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 217 -----KAVDWWALGVLIYEMA 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAV 289
+N H + ++ GL + H + + HRD+K +N+L+ G +ADFGLA
Sbjct: 97 INMHNVKLFLFQLLRGLAYCH--------RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
Query: 290 SYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
+ S + D V T Y P+IL S + + D++ +G + +E+
Sbjct: 149 AKSIPTKTYD----NEVVTLWYRPPDILLGSTDYST-----QIDMWGVGCIFYEMA 195
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I D GLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDAGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------L 155
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 208
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 209 GYN-------KAVDWWALGVLIYEMA 227
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 217 -----KAVDWWALGVLIYEMA 232
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN--VAVK-----IFFSRDEASWSRETEIYSTVLLR 188
+ L + +GKG +G+V+ + N A+K + D+ + + ++
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 189 HENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLV 247
H + + T N L+ V Y + G L H+ + + I+ GL
Sbjct: 78 HPFLTHMFCTFQTKEN----LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 248 HLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVG 307
LH++ I +RD+K NIL+ +G IADFG+ + L D N G
Sbjct: 134 FLHSK--------GIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLG---DAKTNEFCG 181
Query: 308 TKRYMSPEI-LDESINMDCFESFKKADIYALGLVLWEV 344
T Y++PEI L + N D ++ G++L+E+
Sbjct: 182 TPDYIAPEILLGQKYN-------HSVDWWSFGVLLYEM 212
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 84
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 85 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 143
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 144 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-------CGTP 188
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 189 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 218
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y + G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------LDLIYR 186
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 237
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 238 -----KAVDWWALGVLIYEMA 253
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I D GLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDRGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
R A+ + + IG+G +GEV + V H K++ + + + S +
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEV-QLVRHKS--TRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 192 ILGYIGSD-----MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
I+ + S + L++V Y G L + ++ + +V L
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+H+ F HRD+K N+L+ +G +ADFG + +++ + + + V
Sbjct: 182 DAIHSMGF--------IHRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAV 230
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT Y+SPE+L +S D + ++ D +++G+ L+E+
Sbjct: 231 GTPDYISPEVL-KSQGGDGYYG-RECDWWSVGVFLYEM 266
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
R A+ + + IG+G +GEV + V H K++ + + + S +
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEV-QLVRH--KSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 192 ILGYIGSD-----MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
I+ + S + L++V Y G L + ++ + +V L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+H+ F HRD+K N+L+ +G +ADFG + +++ + + + V
Sbjct: 187 DAIHSMGF--------IHRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAV 235
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT Y+SPE+L +S D + ++ D +++G+ L+E+
Sbjct: 236 GTPDYISPEVL-KSQGGDGYYG-RECDWWSVGVFLYEM 271
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQ 234
S E EI ++H NI+ D+ S L+L+ S G L+D + +
Sbjct: 62 SMENEIAVLHKIKHPNIVAL--DDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL---VKTNGTCVIADFGLAVSY 291
++ +++ + +LH I HRD+K +N+L + + +I+DFGL+
Sbjct: 118 ASRLIFQVLDAVKYLHD--------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 292 SQLSNKMDIPP---NPRVGTKRYMSPEILDE---SINMDCF 326
KM+ P + GT Y++PE+L + S +DC+
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 31/241 (12%)
Query: 133 TLAKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHE 190
++ + + IG G +GE+ G ++ E VA+K+ + A + L E
Sbjct: 1 SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATE 60
Query: 191 NI--LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
+ + Y G + + L L+ S L+D +RT ++ I + ++ + +
Sbjct: 61 GVPQVYYFGP--XGKYNAMVLELLGP--SLEDLFDLCDRT-FTLKTVLMIAIQLITRMEY 115
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-----CVIADFGLAVSYSQLSNKMDIPPN 303
+HT+ ++ +RD+K +N LV GT I DFGLA Y K IP
Sbjct: 116 VHTK--------SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYR 167
Query: 304 PR---VGTKRYMS--PEILDESINMDCFESFKKADIYAL-GLVLWEVCRRTKANGIFEEY 357
GT RYMS + E D E+ +Y L G + W+ KA+ + E Y
Sbjct: 168 EHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL---KADTLKERY 224
Query: 358 K 358
+
Sbjct: 225 Q 225
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQ 234
S E EI ++H NI+ D+ S L+L+ S G L+D + +
Sbjct: 62 SMENEIAVLHKIKHPNIVAL--DDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL---VKTNGTCVIADFGLAVSY 291
++ +++ + +LH I HRD+K +N+L + + +I+DFGL+
Sbjct: 118 ASRLIFQVLDAVKYLHD--------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 292 SQLSNKMDIPP---NPRVGTKRYMSPEILDE---SINMDCF 326
KM+ P + GT Y++PE+L + S +DC+
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 35/220 (15%)
Query: 134 LAKQISLSECIGKGRYGEVWR--GVWHGENVAVKI-----FFSRDEASWSRETEIYSTVL 186
++ L E +GKG + V R V G+ A I +RD RE I L
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR--L 66
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLY-DHLNRTTLNHHQMMKICLSIVNG 245
L+H NI+ D S +L+ + G L+ D + R + I+
Sbjct: 67 LKHPNIVRL--HDSISEEG--HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 246 LVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPP 302
++H H + + HR++K +N+L+ K G V +ADFGLA+
Sbjct: 123 VLHCH--------QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW---- 170
Query: 303 NPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
GT Y+SPE+L + D + K D++A G++L+
Sbjct: 171 FGFAGTPGYLSPEVLRK----DPYG--KPVDLWACGVILY 204
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 144 IGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLL----RHENILGYIG 197
+G G YG V G VAVK SR S Y + L +HEN++G +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 198 SDMTSRN--SCTQLWLVTHYHSFGSLYDHL---NRTTLNHHQMMKICLSIVNGLVHLHTE 252
+R+ ++LVTH G+ +++ + T +H Q + I+ GL ++H+
Sbjct: 89 VFTPARSLEEFNDVYLVTHL--MGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIHSA 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYM 312
I HRD+K N+ V + I D GLA D V T+ Y
Sbjct: 145 --------DIIHRDLKPSNLAVNEDCELKILDGGLA-------RHTDDEMTGYVATRWYR 189
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+PEI+ ++ + DI+++G ++ E+
Sbjct: 190 APEIM-----LNWMHYNQTVDIWSVGCIMAEL 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 140 LSECIGKGRYGEVWRGVWHGEN--VAVK-----IFFSRDEASWSRETEIYSTVLLRHENI 192
L + +GKG +G+V+ + N A+K + D+ + + ++ H +
Sbjct: 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHT 251
+ T N L+ V Y + G L H+ + + I+ GL LH+
Sbjct: 81 THMFCTFQTKEN----LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 252 EIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ I +RD+K NIL+ +G IADFG+ + L D N GT Y
Sbjct: 137 K--------GIVYRDLKLDNILLDKDGHIKIADFGMCKE-NMLG---DAKTNXFCGTPDY 184
Query: 312 MSPEI-LDESINMDCFESFKKADIYALGLVLWEV 344
++PEI L + N D ++ G++L+E+
Sbjct: 185 IAPEILLGQKYN-------HSVDWWSFGVLLYEM 211
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
R A+ + + IG+G +GEV + V H K++ + + + S +
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEV-QLVRHKS--TRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 192 ILGYIGSD-----MTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGL 246
I+ + S + L++V Y G L + ++ + +V L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV 306
+H+ F HRD+K N+L+ +G +ADFG + +++ + + + V
Sbjct: 187 DAIHSMGF--------IHRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAV 235
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT Y+SPE+L +S D + ++ D +++G+ L+E+
Sbjct: 236 GTPDYISPEVL-KSQGGDGYYG-RECDWWSVGVFLYEM 271
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 100 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 159 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 203
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 204 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 100 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 159 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-------CGTP 203
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 204 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQ 234
S E EI ++H NI+ D+ S L+L+ S G L+D + +
Sbjct: 62 SMENEIAVLHKIKHPNIVAL--DDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL---VKTNGTCVIADFGLAVSY 291
++ +++ + +LH I HRD+K +N+L + + +I+DFGL+
Sbjct: 118 ASRLIFQVLDAVKYLHD--------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 292 SQLSNKMDIPP---NPRVGTKRYMSPEILDE---SINMDCF 326
KM+ P + GT Y++PE+L + S +DC+
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y G ++ HL R + IV +LH+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 160
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 213
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 214 GYN-------KAVDWWALGVLIYEMA 232
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+++ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y G ++ HL R + IV +LH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 161
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 214
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 215 GYN-------KAVDWWALGVLIYEMA 233
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y G ++ HL R + IV +LH+ + +R
Sbjct: 135 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 186
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 237
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 238 -----KAVDWWALGVLIYEMA 253
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 99
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 100 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 158
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 159 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 203
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 204 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y G ++ HL R + IV +LH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 161
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 214
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 215 GYN-------KAVDWWALGVLIYEMA 233
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 30/161 (18%)
Query: 176 SRETEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQ 234
S E EI ++H NI+ D+ S L+L+ S G L+D + +
Sbjct: 62 SMENEIAVLHKIKHPNIVAL--DDIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERD 117
Query: 235 MMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNIL---VKTNGTCVIADFGLAVSY 291
++ +++ + +LH I HRD+K +N+L + + +I+DFGL+
Sbjct: 118 ASRLIFQVLDAVKYLHD--------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS--- 166
Query: 292 SQLSNKMDIPP---NPRVGTKRYMSPEILDE---SINMDCF 326
KM+ P + GT Y++PE+L + S +DC+
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+++ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 136 KQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSR-------ETEIYSTVL 186
+ + +GKG + V+R + G VA+K+ D+ + + + E+
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI---DKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 187 LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTT-LNHHQMMKICLSIVN 244
L+H +IL S ++LV G + +L NR + ++ I+
Sbjct: 68 LKHPSILELYNYFEDS----NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT 123
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNP 304
G+++LH+ I HRD+ N+L+ N IADFGLA ++ +P
Sbjct: 124 GMLYLHSH--------GILHRDLTLSNLLLTRNMNIKIADFGLAT-------QLKMPHEK 168
Query: 305 RV---GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
GT Y+SPEI S + ES D+++LG + + +
Sbjct: 169 HYTLCGTPNYISPEIATRSAH--GLES----DVWSLGCMFYTL 205
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y G ++ HL R + IV +LH+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 161
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 214
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 215 GYN-------KAVDWWALGVLIYEMA 233
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y G ++ HL R + IV +LH+ + +R
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 217 -----KAVDWWALGVLIYEMA 232
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y G ++ HL R + IV +LH+
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------L 153
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 206
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 207 GYN-------KAVDWWALGVLIYEMA 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+L+ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
Q + +G G +G V + + G + A+KI D+ + +I T L + IL
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHT--LNEKRILQ 97
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVH 248
+ ++ + L++V Y G ++ HL R + IV +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
LH+ + +RD+K +N+++ G + DFG A + + GT
Sbjct: 158 LHS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGT 202
Query: 309 KRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 PEYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTV----LLRHE 190
Q + +G G +G V + + G + A+KI D+ + +I T+ +L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHTLNEKRILQAV 98
Query: 191 NILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHL 249
N + + + +++ + L++V Y G ++ HL R + IV +L
Sbjct: 99 NFPFLVKLEFSFKDN-SNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
H+ + +RD+K +N+++ G + DFG A + + GT
Sbjct: 158 HS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGTP 202
Query: 310 RYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 EYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 232
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y G ++ HL R + IV +LH+ + +R
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 166
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+++ G + DFG A + + GT Y++PE IL + N
Sbjct: 167 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 217
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 218 -----KAVDWWALGVLIYEMA 233
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
Q + +G G +G V + + G + A+KI D+ + +I T L + IL
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHT--LNEKRILQ 97
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVH 248
+ ++ + L++V Y G ++ HL R + IV +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
LH+ + +RD+K +N+++ G + DFG A + + GT
Sbjct: 158 LHS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGT 202
Query: 309 KRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 PEYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 202 SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVHLHTEIFGTQGKP 260
S + L++V Y G ++ HL R + IV +LH+
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS--------L 153
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDE 319
+ +RD+K +N+L+ G + DFG A + + GT Y++PE IL +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSK 206
Query: 320 SINMDCFESFKKADIYALGLVLWEVC 345
N K D +ALG++++E+
Sbjct: 207 GYN-------KAVDWWALGVLIYEMA 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 110/254 (43%), Gaps = 42/254 (16%)
Query: 144 IGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHEN---ILGYIGS 198
+G G G+VW+ + G +AVK ++ + V+L+ + I+ G+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNR---TTLNHHQMMKICLSIVNGLVHLHTEIFG 255
+T+ + + L+ G+ + L + + + K+ ++IV L +L
Sbjct: 93 FITNTDVFIAMELM------GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE---- 142
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
K + HRD+K NIL+ G + DFG++ +L + D + G YM+PE
Sbjct: 143 ---KHGVIHRDVKPSNILLDERGQIKLCDFGIS---GRLVD--DKAKDRSAGCAAYMAPE 194
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMR 375
+D +AD+++LG+ L E+ A G F PY + F+ +
Sbjct: 195 RIDPPDPTKPDYDI-RADVWSLGISLVEL-----ATGQF-----PYKNC---KTDFEVLT 240
Query: 376 KVICIDQQRPVLPN 389
KV + ++ P+LP
Sbjct: 241 KV--LQEEPPLLPG 252
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 137 QISLSECIGKGRYGEVW--RGVWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILG 194
Q + +G G +G V + + G + A+KI D+ + +I T L + IL
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL---DKQKVVKLKQIEHT--LNEKRILQ 97
Query: 195 YIGSDMTSR-----NSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKI-CLSIVNGLVH 248
+ ++ + L++V Y G ++ HL R + IV +
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGT 308
LH+ + +RD+K +N+++ G + DFG A + + GT
Sbjct: 158 LHS--------LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL-------CGT 202
Query: 309 KRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEVC 345
Y++PE IL + N K D +ALG++++E+
Sbjct: 203 PEYLAPEIILSKGYN-------KAVDWWALGVLIYEMA 233
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENI 192
+ E +GKG + V R V G A KI +RD RE I L+H NI
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--LQHPNI 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
+ D S +LV + G L++ + C+ I+ + + H+
Sbjct: 68 VRL--HDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
I HR++K +N+L+ K G V +ADFGLA+ + GT
Sbjct: 124 N--------GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y+SPE+L + D + K DI+A G++L+
Sbjct: 171 PGYLSPEVLKK----DPYS--KPVDIWACGVILY 198
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENI 192
+ E +GKG + V R V G A KI +RD RE I L+H NI
Sbjct: 9 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--LQHPNI 66
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
+ D S +LV + G L++ + C+ I+ + + H+
Sbjct: 67 VRL--HDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 252 EIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
I HR++K +N+L+ K G V +ADFGLA+ + GT
Sbjct: 123 N--------GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AGT 169
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y+SPE+L + D + K DI+A G++L+
Sbjct: 170 PGYLSPEVLKK----DPYS--KPVDIWACGVILY 197
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 234 QMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVK---TNGTCVIADFGLAVS 290
++MK ++N L + H++ + H+D+K +NIL + + I DFGLA
Sbjct: 128 ELMK---QMMNALAYFHSQ--------HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176
Query: 291 YSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
+ K D GT YM+PE+ + C DI++ G+V++
Sbjct: 177 F-----KSDEHSTNAAGTALYMAPEVFKRDVTFKC-------DIWSAGVVMY 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 30/147 (20%)
Query: 204 NSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMK-----ICLSIVNGLVHLHTEIFGTQG 258
Q++++ Y G L+ L ++ + + K +CL+ L +LH++
Sbjct: 76 QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA----LEYLHSK------ 125
Query: 259 KPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
I +RD+K +NIL+ NG I DFG A ++ + GT Y++PE++
Sbjct: 126 --DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-------CGTPDYIAPEVVS 176
Query: 319 ESINMDCFESFKKADIYALGLVLWEVC 345
K D ++ G++++E+
Sbjct: 177 TK------PYNKSIDWWSFGILIYEML 197
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++PE IL + N
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++++
Sbjct: 217 -----KAVDWWALGVLIYQMA 232
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENI 192
+ E +GKG + V R V G A KI +RD RE I L+H NI
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--LQHPNI 67
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
+ D S +LV + G L++ + C+ I+ + + H+
Sbjct: 68 VRL--HDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 252 EIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
I HR++K +N+L+ K G V +ADFGLA+ + GT
Sbjct: 124 N--------GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AGT 170
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y+SPE+L + D + K DI+A G++L+
Sbjct: 171 PGYLSPEVLKK----DPYS--KPVDIWACGVILY 198
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 208 QLWLVTHYHSFGSLYDHLN-RTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRD 266
+ +LV GS+ H++ R N + + + + L LH + IAHRD
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK--------GIAHRD 136
Query: 267 IKSKNILVKTNGTCV---IADFGLAVSYSQLSNKMDIPPNPRV----GTKRYMSPEILDE 319
+K +NIL + I DF L S +L+ P + G+ YM+PE++ E
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLG-SGIKLNGDCSPISTPELLTPCGSAEYMAPEVV-E 194
Query: 320 SINMDCFESFKKADIYALGLVLW 342
+ + + K+ D+++LG++L+
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILY 217
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V++ E VA+K D+ + + LL+ H+NI+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL- 66
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
+S +L LV + +D N L+ + ++ GL H+
Sbjct: 67 ---HDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR-- 120
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ HRD+K +N+L+ NG +ADFGLA ++
Sbjct: 121 ------NVLHRDLKPQNLLINRNGELKLADFGLARAFG 152
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 140 LSECIGKGRYGEVWRGVWH--GENVAVKI-----FFSRDEASWSRETEIYSTVLLRHENI 192
+ E +GKG + V R V G A KI +RD RE I L+H NI
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK--LQHPNI 90
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLS-IVNGLVHLHT 251
+ D S +LV + G L++ + C+ I+ + + H+
Sbjct: 91 VRL--HDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 252 EIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVGT 308
I HR++K +N+L+ K G V +ADFGLA+ + GT
Sbjct: 147 N--------GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF-----AGT 193
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
Y+SPE+L + D + K DI+A G++L+
Sbjct: 194 PGYLSPEVLKK----DPYS--KPVDIWACGVILY 221
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 35/232 (15%)
Query: 136 KQISLSECIGKGRYGEVWRGVWHGEN-----VAVKIFFSRDEASWSRETEIYSTVLLR-- 188
+Q +L +GKG +G V E+ VAVK+ + AS E + ++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 189 -HENILGYIGSDMTSR--NSCTQLWLVTHYHSFGSLYDHL-------NRTTLNHHQMMKI 238
H ++ +G + SR ++ + G L+ L N L +++
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 239 CLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKM 298
+ I G+ +L + F HRD+ ++N ++ + T +ADFGL S K+
Sbjct: 143 MVDIACGMEYLSSRNF--------IHRDLAARNCMLAEDMTVCVADFGL-------SRKI 187
Query: 299 DIPPNPRVGTKRYMSPEILD-ESINMDCFESFKKADIYALGLVLWEVCRRTK 349
R G + + L ES+ + + +D++A G+ +WE+ R +
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTV--HSDVWAFGVTMWEIMTRGQ 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDC 325
D+K +N+++ G + DFG A + + GT Y++PEI+
Sbjct: 166 DLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPEII-------I 211
Query: 326 FESFKKA-DIYALGLVLWEVC 345
+ + KA D +ALG++++E+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMA 232
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 25/225 (11%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET--EIYSTVLLRH 189
++ L +G+G YG V GE VA+K D+ ++ T EI +H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 190 ENILGYIGSDMT-SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
ENI+ S + +++++ L+ ++ L+ + + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR--- 305
LH G+ + HRD+K N+L+ +N + DFGLA + + P +
Sbjct: 128 LH----GSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 306 ---VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
V T+ Y +PE++ S + D+++ G +L E+ R
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYS-----RAMDVWSCGCILAELFLR 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 25/225 (11%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET--EIYSTVLLRH 189
++ L +G+G YG V GE VA+K D+ ++ T EI +H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 190 ENILGYIGSDMT-SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
ENI+ S + +++++ L+ ++ L+ + + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR--- 305
LH G+ + HRD+K N+L+ +N + DFGLA + + P +
Sbjct: 128 LH----GSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 306 ---VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
V T+ Y +PE++ S + D+++ G +L E+ R
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYS-----RAMDVWSCGCILAELFLR 219
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT Y++P IL + N
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEYLAPAIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 217 -----KAVDWWALGVLIYEMA 232
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 25/225 (11%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRET--EIYSTVLLRH 189
++ L +G+G YG V GE VA+K D+ ++ T EI +H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 190 ENILGYIGSDMT-SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
ENI+ S + +++++ L+ ++ L+ + + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPR--- 305
LH G+ + HRD+K N+L+ +N + DFGLA + + P +
Sbjct: 128 LH----GSN----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 306 ---VGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCRR 347
V T+ Y +PE++ S + D+++ G +L E+ R
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYS-----RAMDVWSCGCILAELFLR 219
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 36/202 (17%)
Query: 219 GSLYDHLNRTTLNHHQMMKICL-SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN 277
G L HL + + +K+ + +V L +L + I HRD+K NIL+ +
Sbjct: 100 GDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ--------RIIHRDMKPDNILLDEH 151
Query: 278 GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYAL 337
G I DF +A + L + I GTK YM+PE+ S SF D ++L
Sbjct: 152 GHVHITDFNIA---AMLPRETQI--TTMAGTKPYMAPEMF--SSRKGAGYSF-AVDWWSL 203
Query: 338 GLVLWEVCRRTKANGIFEEYKAPYHDLVPMDPSFDDMRKVICIDQQRPVLPNRWVSDSTL 397
G+ +E+ R + PYH + S V + P+ W +
Sbjct: 204 GVTAYELLRG----------RRPYH----IRSSTSSKEIVHTFETTVVTYPSAWSQE--- 246
Query: 398 NAMTKVMKECWHQNANVRLSAL 419
M ++K+ N + R S L
Sbjct: 247 --MVSLLKKLLEPNPDQRFSQL 266
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 139
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y +P E IN F S
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY-AP----ECINYYKFSS- 193
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 194 -KSDVWSFGVLMWEA 207
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 46/224 (20%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL--- 193
L E IGKG + V R + G+ AVKI D A ++ + + L R +I
Sbjct: 27 ELCEVIGKGAFSVVRRCINRETGQQFAVKIV---DVAKFTSSPGLSTEDLKREASICHML 83
Query: 194 --GYIGSDMTSRNSCTQLWLVTHYHSFGSL-YDHLNRT--------TLNHHQMMKICLSI 242
+I + + +S L++V + L ++ + R + H M +I
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 139
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMD 299
+ L + H I HRD+K +N+L+ K N V + DFG+A+ +
Sbjct: 140 LEALRYCHDN--------NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG---- 187
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLW 342
+ RVGT +M+PE++ E + K D++ G++L+
Sbjct: 188 LVAGGRVGTPHFMAPEVVKR-------EPYGKPVDVWGCGVILF 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 155
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y E IN F S
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-----ECINYYKFSS- 209
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 210 -KSDVWSFGVLMWEA 223
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 155
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y E IN F S
Sbjct: 156 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-----ECINYYKFSS- 209
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 210 -KSDVWSFGVLMWEA 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 139
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y +P E IN F S
Sbjct: 140 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-AP----ECINYYKFSS- 193
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 194 -KSDVWSFGVLMWEA 207
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 90/229 (39%), Gaps = 43/229 (18%)
Query: 139 SLSECIGKGRYGEVWRGV-WHGENVAVKIFFSRDEASWSRETEIYSTVLL---------- 187
++ I G YG V GV G VA+K F + S R I S L
Sbjct: 25 TVQRFISSGSYGAVCAGVDSEGIPVAIKRVF--NTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 188 ----RHENILGYIGSDMT---SRNSCTQLWLVTHYHSFG-SLYDHLNRTTLNHHQMMKIC 239
H NILG D+ + +L+LVT + H R ++ +
Sbjct: 83 LNHFHHPNILGL--RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM 140
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
I+ GL LH + + HRD+ NIL+ N I DF LA + +NK
Sbjct: 141 YHILLGLHVLH--------EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH 192
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKK-ADIYALGLVLWEVCRR 347
V + Y +PE++ + F+ F K D+++ G V+ E+ R
Sbjct: 193 Y-----VTHRWYRAPELVMQ------FKGFTKLVDMWSAGCVMAEMFNR 230
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 90/229 (39%), Gaps = 43/229 (18%)
Query: 139 SLSECIGKGRYGEVWRGV-WHGENVAVKIFFSRDEASWSRETEIYSTVLL---------- 187
++ I G YG V GV G VA+K F + S R I S L
Sbjct: 25 TVQRFISSGSYGAVCAGVDSEGIPVAIKRVF--NTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 188 ----RHENILGYIGSDMT---SRNSCTQLWLVTHYHSFG-SLYDHLNRTTLNHHQMMKIC 239
H NILG D+ + +L+LVT + H R ++ +
Sbjct: 83 LNHFHHPNILGL--RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM 140
Query: 240 LSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMD 299
I+ GL LH + + HRD+ NIL+ N I DF LA + +NK
Sbjct: 141 YHILLGLHVLH--------EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH 192
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESFKK-ADIYALGLVLWEVCRR 347
V + Y +PE++ + F+ F K D+++ G V+ E+ R
Sbjct: 193 Y-----VTHRWYRAPELVMQ------FKGFTKLVDMWSAGCVMAEMFNR 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 135
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y +P E IN F S
Sbjct: 136 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-AP----ECINYYKFSS- 189
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 190 -KSDVWSFGVLMWEA 203
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 145
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y +P E IN F S
Sbjct: 146 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-AP----ECINYYKFSS- 199
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 200 -KSDVWSFGVLMWEA 213
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 153
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y E IN F S
Sbjct: 154 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-----ECINYYKFSS- 207
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 208 -KSDVWSFGVLMWEA 221
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 133
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y +P E IN F S
Sbjct: 134 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-AP----ECINYYKFSS- 187
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 188 -KSDVWSFGVLMWEA 201
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 142 ECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYI 196
E IG+G YG V++ E VA+K D+ + + LL+ H+NI+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL- 66
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
D+ +S +L LV + +D N L+ + ++ GL H+
Sbjct: 67 -HDVL--HSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR-- 120
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYS 292
+ HRD+K +N+L+ NG +A+FGLA ++
Sbjct: 121 ------NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
+ L++V Y + G ++ HL R + IV +LH+ + +R
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS--------LDLIYR 165
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE-ILDESINMD 324
D+K +N+L+ G + DFG A + + GT ++PE IL + N
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-------CGTPEALAPEIILSKGYN-- 216
Query: 325 CFESFKKADIYALGLVLWEVC 345
K D +ALG++++E+
Sbjct: 217 -----KAVDWWALGVLIYEMA 232
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 498
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y E IN F S
Sbjct: 499 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-----ECINYYKFSS- 552
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 553 -KSDVWSFGVLMWEA 566
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 217 SFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV-- 274
S L+D +RT + ++ I + +++ + ++H++ + +RD+K +N L+
Sbjct: 90 SLEDLFDLCDRT-FSLKTVLMIAIQLISRMEYVHSK--------NLIYRDVKPENFLIGR 140
Query: 275 ---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---VGTKRYMS--PEILDESINMDCF 326
KT I DFGLA Y K IP GT RYMS + E D
Sbjct: 141 PGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDL 200
Query: 327 ESFKKADIYAL-GLVLWEVCRRTKANGIFEEYK 358
E+ +Y L G + W+ KA+ + E Y+
Sbjct: 201 EALGHMFMYFLRGSLPWQGL---KADTLKERYQ 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 211 LVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKS 269
LV G L +L + + ++++ + G+ +L F HRD+ +
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF--------VHRDLAA 497
Query: 270 KNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESF 329
+N+L+ T I+DFGL+ + N + + K Y E IN F S
Sbjct: 498 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP-----ECINYYKFSS- 551
Query: 330 KKADIYALGLVLWEV 344
K+D+++ G+++WE
Sbjct: 552 -KSDVWSFGVLMWEA 565
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 209 LWLVTHYHSFGSLYDHLNRTTLN-HHQMMKICLS-IVNGLVHLHTEIFGTQGKPAIAHRD 266
L+LV Y+ G L L++ +M + L+ IV + +H + HRD
Sbjct: 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH--------RLGYVHRD 187
Query: 267 IKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDE-SINMDC 325
IK NIL+ G +ADFG S +L + VGT Y+SPEIL
Sbjct: 188 IKPDNILLDRCGHIRLADFG---SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 326 FESFKKADIYALGLVLWEV 344
+ D +ALG+ +E+
Sbjct: 245 GSYGPECDWWALGVFAYEM 263
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 39/214 (18%)
Query: 140 LSECIGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRETEIYSTVLLR---HENILG 194
+ E IG G Y R + N AVKI + + + E EI LLR H NI+
Sbjct: 26 VKEDIGVGSYSVCKRCIHKATNXEFAVKII-DKSKRDPTEEIEI----LLRYGQHPNII- 79
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTL-NHHQMMKICLSIVNGLVHLHTEI 253
+ + +++VT G L D + R + + + +I + +LH +
Sbjct: 80 ---TLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ- 135
Query: 254 FGTQGKPAIAHRDIKSKNIL-VKTNG---TCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ HRD+K NIL V +G + I DFG A QL + + P T
Sbjct: 136 -------GVVHRDLKPSNILYVDESGNPESIRICDFGFA---KQLRAENGLLXTP-CYTA 184
Query: 310 RYMSPEILD-ESINMDCFESFKKADIYALGLVLW 342
+++PE+L+ + + C DI++LG++L+
Sbjct: 185 NFVAPEVLERQGYDAAC-------DIWSLGVLLY 211
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 39/214 (18%)
Query: 140 LSECIGKGRYGEVWRGVWHGENV--AVKIFFSRDEASWSRETEIYSTVLLR---HENILG 194
+ E IG G Y R + N+ AVKI + + + E EI LLR H NI+
Sbjct: 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKII-DKSKRDPTEEIEI----LLRYGQHPNII- 79
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTL-NHHQMMKICLSIVNGLVHLHTEI 253
+ + +++VT G L D + R + + + +I + +LH +
Sbjct: 80 ---TLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ- 135
Query: 254 FGTQGKPAIAHRDIKSKNIL-VKTNG---TCVIADFGLAVSYSQLSNKMDIPPNPRVGTK 309
+ HRD+K NIL V +G + I DFG A QL + + P T
Sbjct: 136 -------GVVHRDLKPSNILYVDESGNPESIRICDFGFA---KQLRAENGLLMTP-CYTA 184
Query: 310 RYMSPEILD-ESINMDCFESFKKADIYALGLVLW 342
+++PE+L+ + + C DI++LG++L+
Sbjct: 185 NFVAPEVLERQGYDAAC-------DIWSLGVLLY 211
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 34/212 (16%)
Query: 144 IGKGRYGEVWRGVWHGE----NVAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
+G G +G V +GV+ +VA+K+ E + + E + ++ + +N I+ IG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
L LV G L+ L R + + ++ + G+ +L + F
Sbjct: 78 V-----CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF- 131
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTK---RYM 312
HRD+ ++N+L+ I+DFGL S+ D R K ++
Sbjct: 132 -------VHRDLAARNVLLVNRHYAKISDFGL----SKALGADDSYYTARSAGKWPLKWY 180
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLWEV 344
+P E IN F S ++D+++ G+ +WE
Sbjct: 181 AP----ECINFRKFSS--RSDVWSYGVTMWEA 206
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 30/196 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKI----FFSRDEASWSRETEIYSTVLLRHENI 192
+ E +G G +G V R + GE VA+K ++ W E +I L H N+
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKK--LNHPNV 75
Query: 193 LGY--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT----LNHHQMMKICLSIVNGL 246
+ + + L Y G L +LN+ L + + I + L
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI---ADFGLAVSYSQLSNKMDIPPN 303
+LH I HRD+K +NI+++ +I D G A Q +
Sbjct: 136 RYLHEN--------RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF--- 184
Query: 304 PRVGTKRYMSPEILDE 319
VGT +Y++PE+L++
Sbjct: 185 --VGTLQYLAPELLEQ 198
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 30/196 (15%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKI----FFSRDEASWSRETEIYSTVLLRHENI 192
+ E +G G +G V R + GE VA+K ++ W E +I L H N+
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKK--LNHPNV 74
Query: 193 LGY--IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT----LNHHQMMKICLSIVNGL 246
+ + + L Y G L +LN+ L + + I + L
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVI---ADFGLAVSYSQLSNKMDIPPN 303
+LH I HRD+K +NI+++ +I D G A Q +
Sbjct: 135 RYLHEN--------RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF--- 183
Query: 304 PRVGTKRYMSPEILDE 319
VGT +Y++PE+L++
Sbjct: 184 --VGTLQYLAPELLEQ 197
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 37/224 (16%)
Query: 136 KQISLSEC--IGKGRYGEVWRG-VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI 192
++I+ + C IG G +G V++ + + VA+K +D+ +RE +I V +H N+
Sbjct: 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL-QDKRFKNRELQIMRIV--KHPNV 94
Query: 193 LGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL------SIVNGL 246
+ ++ + +++L +R Q M + L ++ L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 247 VHLHTEIFGTQGKPAIAHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
++H+ I HRDIK +N+L+ +G + DFG S K+ I P
Sbjct: 155 AYIHSI--------GICHRDIKPQNLLLDPPSGVLKLIDFG--------SAKILIAGEPN 198
Query: 306 VG---TKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
V ++ Y +PE++ + N DI++ G V+ E+ +
Sbjct: 199 VSXICSRYYRAPELIFGATNYTT-----NIDIWSTGCVMAELMQ 237
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 38/240 (15%)
Query: 138 ISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGY 195
+ + + IG G +GE+ G ++ E VA+K+ E SR +++ + R LG
Sbjct: 2 MRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPIKSRAPQLH--LEYRFYKQLGS 54
Query: 196 IGSDMTS------RNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHL 249
G + + L S L+D +RT ++ I + +++ + ++
Sbjct: 55 AGEGLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT-FTLKTVLMIAIQLLSRMEYV 113
Query: 250 HTEIFGTQGKPAIAHRDIKSKNILVKTNGT-----CVIADFGLAVSYSQLSNKMDIPPNP 304
H++ + +RD+K +N L+ G I DFGLA Y K IP
Sbjct: 114 HSK--------NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYRE 165
Query: 305 R---VGTKRYMS--PEILDESINMDCFESFKKADIYAL-GLVLWEVCRRTKANGIFEEYK 358
GT RYMS + E D E+ +Y L G + W+ KA+ + E Y+
Sbjct: 166 HKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL---KADTLKERYQ 222
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 135 AKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEAS----WSRETEIYSTVL---- 186
+++ S +G G +G VW V +N V + F + E W + ++ L
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 187 ---LRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNR-TTLNHHQMMKICLSI 242
+ H NI+ + D+ QL + H L+ ++R L+ I +
Sbjct: 83 LSRVEHANIIKVL--DIFENQGFFQLVMEKHGSGL-DLFAFIDRHPRLDEPLASYIFRQL 139
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPP 302
V+ + +L + I HRDIK +NI++ + T + DFG A +Y +
Sbjct: 140 VSAVGYLRLK--------DIIHRDIKDENIVIAEDFTIKLIDFGSA-AYLERGKLF---- 186
Query: 303 NPRVGTKRYMSPEIL 317
GT Y +PE+L
Sbjct: 187 YTFCGTIEYCAPEVL 201
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 20/120 (16%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
H R + + + G+ +LH + HRD+K N+ + + I
Sbjct: 117 HKRRKAVTEPEARYFMRQTIQGVQYLHNN--------RVIHRDLKLGNLFLNDDMDVKIG 168
Query: 284 DFGLAVSYS-QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
DFGLA K D+ GT Y++PE+L + + SF + DI++LG +L+
Sbjct: 169 DFGLATKIEFDGERKKDL-----CGTPNYIAPEVLCKKGH-----SF-EVDIWSLGCILY 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 20/120 (16%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
H R + + + G+ +LH + HRD+K N+ + + I
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNN--------RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 284 DFGLAVSYS-QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
DFGLA K D+ GT Y++PE+L + + FE DI++LG +L+
Sbjct: 185 DFGLATKIEFDGERKKDL-----CGTPNYIAPEVLCKKGH--SFE----VDIWSLGCILY 233
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 33/208 (15%)
Query: 144 IGKGRYGEVW-------RGVWHGENVAVKIFFS-RDEASWSRETEIYSTVLLRHENILGY 195
+GKG + + + + V+ G+ V + S E I+ + L H++++G+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS--LAHQHVVGF 106
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
G N +++V SL + H R L + IV G +LH
Sbjct: 107 HG--FFEDNDF--VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-- 160
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ HRD+K N+ + + I DFGLA + + GT Y++P
Sbjct: 161 ------RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAP 210
Query: 315 EILDESINMDCFESFKKADIYALGLVLW 342
E+L S FE D++++G +++
Sbjct: 211 EVL--SKKGHSFE----VDVWSIGCIMY 232
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 33/208 (15%)
Query: 144 IGKGRYGEVW-------RGVWHGENVAVKIFFS-RDEASWSRETEIYSTVLLRHENILGY 195
+GKG + + + + V+ G+ V + S E I+ + L H++++G+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS--LAHQHVVGF 104
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
G N +++V SL + H R L + IV G +LH
Sbjct: 105 HG--FFEDNDF--VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---- 156
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSP 314
+ + HRD+K N+ + + I DFGLA + + GT Y++P
Sbjct: 157 ----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV----LCGTPNYIAP 208
Query: 315 EILDESINMDCFESFKKADIYALGLVLW 342
E+L S FE D++++G +++
Sbjct: 209 EVL--SKKGHSFE----VDVWSIGCIMY 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 25/145 (17%)
Query: 179 TEIYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMK 237
TEI + L H NI+ + T++ LV + G L+D + + +
Sbjct: 97 TEIGVLLRLSHPNIIKL----KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD 152
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT---NGTCVIADFGLA--VSYS 292
I+ + +LH I HRD+K +N+L T + IADFGL+ V +
Sbjct: 153 AVKQILEAVAYLHEN--------GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEIL 317
L + GT Y +PEIL
Sbjct: 205 VLMKTV-------CGTPGYCAPEIL 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 18/119 (15%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
H R L + IV G +LH + + HRD+K N+ + + I
Sbjct: 106 HKRRKALTEPEARYYLRQIVLGCQYLH--------RNRVIHRDLKLGNLFLNEDLEVKIG 157
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
DFGLA + + GT Y++PE+L S FE D++++G +++
Sbjct: 158 DFGLATKVEYDGERKKV----LCGTPNYIAPEVL--SKKGHSFE----VDVWSIGCIMY 206
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 73/184 (39%), Gaps = 25/184 (13%)
Query: 139 SLSECIGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LG 194
L +G+G+Y EV+ + + E V VKI + RE +I L NI L
Sbjct: 40 QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILEN-LRGGPNIITLA 98
Query: 195 YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
I D SR V + F LY TL + + I+ L + H+
Sbjct: 99 DIVKDPVSRTPALVFEHVNNT-DFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-- 150
Query: 255 GTQGKPAIAHRDIKSKNILVK-TNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMS 313
I HRD+K N+++ + + D+GLA Y N RV ++ +
Sbjct: 151 ------GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-----NVRVASRYFKG 199
Query: 314 PEIL 317
PE+L
Sbjct: 200 PELL 203
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 28/209 (13%)
Query: 144 IGKGRYGEVWRGVWHGE----NVAVKIFFSRDEASWSRETEIYSTVLLRHEN--ILGYIG 197
+G G +G V +GV+ +VA+K+ E + + E + ++ + +N I+ IG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFG 255
L LV G L+ L R + + ++ + G+ +L + F
Sbjct: 404 V-----CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF- 457
Query: 256 TQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPE 315
HR++ ++N+L+ I+DFGL+ + + + K Y
Sbjct: 458 -------VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP-- 508
Query: 316 ILDESINMDCFESFKKADIYALGLVLWEV 344
E IN F S ++D+++ G+ +WE
Sbjct: 509 ---ECINFRKFSS--RSDVWSYGVTMWEA 532
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 17/85 (20%)
Query: 262 IAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + + + DFG A +Q N + P T Y++PE+L
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTP----CYTPYYVAPEVLG 202
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 203 PEKYDKSC-------DMWSLGVIMY 220
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 17/85 (20%)
Query: 262 IAHRDIKSKNILVKT---NGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + + + DFG A +Q N + P T Y++PE+L
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTP----CYTPYYVAPEVLG 183
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 184 PEKYDKSC-------DMWSLGVIMY 201
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 238 ICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV----KTNGTCVIADFGLAVSY-S 292
+ I++G+ +LH + HRD+K NILV G IAD G A + S
Sbjct: 133 LLYQILDGIHYLHANW--------VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 293 QLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
L D+ +P V T Y +PE+L + K DI+A+G + E+
Sbjct: 185 PLKPLADL--DPVVVTFWYRAPELL-----LGARHYTKAIDIWAIGCIFAEL 229
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTVLLR 188
L Q + +G G +G V+ G+ +N+ V I +D S W T + V+L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 189 HENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIV 243
+ G+ G D R L ++ L+D + R L ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKMDIP 301
+ H H + HRDIK +NIL+ N G + DFG A+ + D
Sbjct: 121 EAVRHCHNX--------GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-- 170
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 171 -----GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 205
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 37/210 (17%)
Query: 144 IGKGRYGEVW-------RGVWHGENVAVKIFFS-RDEASWSRETEIYSTVLLRHENILGY 195
+GKG + + + + V+ G+ V + S E I+ + L H++++G+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS--LAHQHVVGF 82
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
G N +++V SL + H R L + IV G +LH
Sbjct: 83 HG--FFEDNDF--VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---- 134
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNPRVGTKRYM 312
+ + HRD+K N+ + + I DFGLA V Y K GT Y+
Sbjct: 135 ----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT------LCGTPNYI 184
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+L S FE D++++G +++
Sbjct: 185 APEVL--SKKGHSFE----VDVWSIGCIMY 208
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 37/210 (17%)
Query: 144 IGKGRYGEVW-------RGVWHGENVAVKIFFS-RDEASWSRETEIYSTVLLRHENILGY 195
+GKG + + + + V+ G+ V + S E I+ + L H++++G+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS--LAHQHVVGF 82
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
G N +++V SL + H R L + IV G +LH
Sbjct: 83 HG--FFEDNDF--VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---- 134
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNPRVGTKRYM 312
+ + HRD+K N+ + + I DFGLA V Y K GT Y+
Sbjct: 135 ----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT------LCGTPNYI 184
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+L S FE D++++G +++
Sbjct: 185 APEVL--SKKGHSFE----VDVWSIGCIMY 208
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 37/210 (17%)
Query: 144 IGKGRYGEVW-------RGVWHGENVAVKIFFS-RDEASWSRETEIYSTVLLRHENILGY 195
+GKG + + + + V+ G+ V + S E I+ + L H++++G+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS--LAHQHVVGF 86
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYD-HLNRTTLNHHQMMKICLSIVNGLVHLHTEIF 254
G N +++V SL + H R L + IV G +LH
Sbjct: 87 HG--FFEDNDF--VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---- 138
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNPRVGTKRYM 312
+ + HRD+K N+ + + I DFGLA V Y K GT Y+
Sbjct: 139 ----RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT------LCGTPNYI 188
Query: 313 SPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+L S FE D++++G +++
Sbjct: 189 APEVL--SKKGHSFE----VDVWSIGCIMY 212
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 142 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 196
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 197 PEKYDKSC-------DMWSLGVIMY 214
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 86/225 (38%), Gaps = 33/225 (14%)
Query: 134 LAKQISLSECIGKGRYGEVWRG--VWHGENVAVKIFFSRDEASWSRETEIYSTVLLRHEN 191
+ + L IG G +GE++ G + E VA+K+ + +Y + + R
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----ENVKTKHPQLLYESKIYRI-- 58
Query: 192 ILGYIGSDMTSRNSCTQLWLVTHYHSFG-SLYDHLN--RTTLNHHQMMKICLSIVNGLVH 248
+ G G + V G SL D N L+ ++ + ++N +
Sbjct: 59 LQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEF 118
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR 305
+H++ F HRDIK N L+ + I DFGLA Y S IP
Sbjct: 119 VHSKSF--------LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYREN 170
Query: 306 ---VGTKRYMSPEILDESINMDC-FESFKKADIYALGLVLWEVCR 346
GT RY S+N E ++ D+ +LG VL R
Sbjct: 171 KNLTGTARYA-------SVNTHLGIEQSRRDDLESLGYVLMYFLR 208
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 143 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 197
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 198 PEKYDKSC-------DMWSLGVIMY 215
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 144 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 198
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 199 PEKYDKSC-------DMWSLGVIMY 216
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 62
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERMEPVQDLFDFITERGALQEELARSFFW 121
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 122 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 173
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 174 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 152 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 206
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 207 PEKYDKSC-------DMWSLGVIMY 224
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
H R + + + G+ +LH + HRD+K N+ + + I
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNN--------RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
DFGLA + GT Y++PE+L + + FE DI++LG +L+
Sbjct: 185 DFGLATKIEFDGERKKT----LCGTPNYIAPEVLCKKGH--SFE----VDIWSLGCILY 233
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 190
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 191 PEKYDKSC-------DMWSLGVIMY 208
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 192
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 193 PEKYDKSC-------DMWSLGVIMY 210
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 137 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 191
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 192 PEKYDKSC-------DMWSLGVIMY 209
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 138 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 189
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 190 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 225
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 77
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 137 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 188
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 189 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 236
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 237 PEKYDKSC-------DMWSLGVIMY 254
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 224 HLNRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA 283
H R + + + G+ +LH + HRD+K N+ + + I
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNN--------RVIHRDLKLGNLFLNDDMDVKIG 184
Query: 284 DFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
DFGLA + GT Y++PE+L + + FE DI++LG +L+
Sbjct: 185 DFGLATKIEFDGERKKX----LCGTPNYIAPEVLCKKGH--SFE----VDIWSLGCILY 233
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 77
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 137 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 188
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 189 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 224
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 46 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 105
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 165 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 216
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 217 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 252
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 138 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 189
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 190 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 225
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 192
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 193 PEKYDKSC-------DMWSLGVIMY 210
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 188 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 242
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 243 PEKYDKSC-------DMWSLGVIMY 260
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 138 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 189
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 190 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 26 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 85
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 86 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 144
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 145 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 196
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 197 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 232
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 123 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 175 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 210
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 17/115 (14%)
Query: 208 QLWLVTHYHSFGSLYDHL--NRTTLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
++ L+ + S G L+D + ++ +++ GL H+H +I H
Sbjct: 122 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH--------SIVHL 173
Query: 266 DIKSKNILVKTN--GTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
DIK +NI+ +T + I DFGLA + D T + +PEI+D
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLATKLNP-----DEIVKVTTATAEFAAPEIVD 223
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 123 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 175 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 210
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 97
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 98 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 156
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 157 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 208
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 209 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 244
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 62
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 121
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 122 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 173
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 174 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 209
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSR-------DEASWSRETEIYST 184
+ L ++ ++E +G+G +G V R V E + K + ++ D+ +E I +
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCV---ETSSKKTYMAKFVKVKGTDQVLVKKEISILN- 56
Query: 185 VLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT--LNHHQMMKICLSI 242
+ RH NIL S S +L ++ + S +++ +N + LN +++ +
Sbjct: 57 -IARHRNILHL----HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQV 111
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKT--NGTCVIADFGLA 288
L LH+ I H DI+ +NI+ +T + T I +FG A
Sbjct: 112 CEALQFLHSH--------NIGHFDIRPENIIYQTRRSSTIKIIEFGQA 151
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 150 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 201
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 202 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 237
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 123 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 175 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 210
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 151 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 202
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 203 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 238
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 150 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 201
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 202 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 237
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 29/144 (20%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
++L+ V Y + G L H+ R L I L +LH I +R
Sbjct: 94 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER--------GIIYR 145
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRYMSPEIL-DES 320
D+K N+L+ + G + D+G+ K + P GT Y++PEIL E
Sbjct: 146 DLKLDNVLLDSEGHIKLTDYGMC--------KEGLRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 321 INMDCFESFKKADIYALGLVLWEV 344
D +ALG++++E+
Sbjct: 198 YGF-------SVDWWALGVLMFEM 214
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 46 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 105
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 165 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 216
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 217 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 252
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 150 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 201
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 202 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 237
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 151 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 202
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 203 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 151 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 202
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 203 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 51 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 110
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 111 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 169
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 170 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 221
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 222 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 149
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 150 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 201
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 202 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 237
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 29/144 (20%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
++L+ V Y + G L H+ R L I L +LH I +R
Sbjct: 126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER--------GIIYR 177
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRYMSPEIL-DES 320
D+K N+L+ + G + D+G+ K + P GT Y++PEIL E
Sbjct: 178 DLKLDNVLLDSEGHIKLTDYGMC--------KEGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 321 INMDCFESFKKADIYALGLVLWEV 344
D +ALG++++E+
Sbjct: 230 YGF-------SVDWWALGVLMFEM 246
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 150
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 151 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 202
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 203 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 230 LNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN---GTCVIADFG 286
++ + ++++ I+ G+ +LH + I H D+K +NIL+ + G I DFG
Sbjct: 128 VSENDVIRLIKQILEGVYYLH--------QNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179
Query: 287 LAVSYSQLSNKMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVCR 346
++ +I +GT Y++PEIL N D + D++ +G++ + +
Sbjct: 180 MSRKIGHACELREI-----MGTPEYLAPEIL----NYDPITT--ATDMWNIGIIAYMLLT 228
Query: 347 RT 348
T
Sbjct: 229 HT 230
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 37/223 (16%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHE- 190
+A + + + IGKG +G+V + H + V + R+E + R+ EI LR +
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 191 -----NILGYIGSDMTSRNS-CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
N++ ++ + T RN C L++ +LY+ + + + L +V
Sbjct: 155 KDNTMNVI-HMLENFTFRNHICMTFELLSM-----NLYELIKKN-----KFQGFSLPLVR 203
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA--DFGLAVSYSQLSNKMDIPP 302
H + K I H D+K +NIL+K G I DFG + Q
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXX---- 259
Query: 303 NPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
+ ++ Y +PE IL M D+++LG +L E+
Sbjct: 260 ---IQSRFYRAPEVILGARYGMPI-------DMWSLGCILAEL 292
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 33/155 (21%)
Query: 200 MTSRNSCTQ----LWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIF 254
+ +SC Q L+ V Y + G L H+ R L I L +LH
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER-- 129
Query: 255 GTQGKPAIAHRDIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKR 310
I +RD+K N+L+ + G + D+G+ K + P GT
Sbjct: 130 ------GIIYRDLKLDNVLLDSEGHIKLTDYGMC--------KEGLRPGDTTSXFCGTPN 175
Query: 311 YMSPEIL-DESINMDCFESFKKADIYALGLVLWEV 344
Y++PEIL E D +ALG++++E+
Sbjct: 176 YIAPEILRGEDYGF-------SVDWWALGVLMFEM 203
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 261 AIAHRDIKSKNILVKT-NGTCVIADFGLAVSYSQLSNKMDIPPNPRVG---TKRYMSPEI 316
I HRDIK +N+LV + + T + DFG A K IP P V ++ Y +PE+
Sbjct: 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSA--------KKLIPSEPSVAXICSRFYRAPEL 212
Query: 317 LDESINMDCFESFKKADIYALGLVLWEV 344
+ + E D++++G V E+
Sbjct: 213 M-----LGATEYTPSIDLWSIGCVFGEL 235
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTVLLR 188
L Q + +G G +G V+ G+ +N+ V I +D S W T + V+L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 189 HENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIV 243
+ G+ G D R L ++ L+D + R L ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKMDIP 301
+ H H + HRDIK +NIL+ N G + DFG A+ + D
Sbjct: 121 EAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-- 170
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 171 -----GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 205
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 131 QRTLAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTV 185
+ L Q + +G G +G V+ G+ +N+ V I +D S W T + V
Sbjct: 2 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 61
Query: 186 LLRHENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICL 240
+L + G+ G D R L ++ L+D + R L
Sbjct: 62 VLLKKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFW 120
Query: 241 SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKM 298
++ + H H + HRDIK +NIL+ N G + DFG A+ +
Sbjct: 121 QVLEAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 172
Query: 299 DIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
D GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 173 D-------GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 29/144 (20%)
Query: 207 TQLWLVTHYHSFGSLYDHLNRT-TLNHHQMMKICLSIVNGLVHLHTEIFGTQGKPAIAHR 265
++L+ V Y + G L H+ R L I L +LH I +R
Sbjct: 79 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER--------GIIYR 130
Query: 266 DIKSKNILVKTNGTCVIADFGLAVSYSQLSNKMDIPPNPRV----GTKRYMSPEIL-DES 320
D+K N+L+ + G + D+G+ K + P GT Y++PEIL E
Sbjct: 131 DLKLDNVLLDSEGHIKLTDYGMC--------KEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 321 INMDCFESFKKADIYALGLVLWEV 344
D +ALG++++E+
Sbjct: 183 YGF-------SVDWWALGVLMFEM 199
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKI-FFSRDEAS-WSR---ETEIYSTVLLR 188
L Q + +G G +G V+ G+ +N+ V I +D S W T + V+L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 189 HENILGYIGS----DMTSRNSCTQLWLVTHYHSFGSLYDHL-NRTTLNHHQMMKICLSIV 243
+ G+ G D R L ++ L+D + R L ++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVL-ILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 244 NGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTN-GTCVIADFGL-AVSYSQLSNKMDIP 301
+ H H + HRDIK +NIL+ N G + DFG A+ + D
Sbjct: 121 EAVRHCHN--------CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-- 170
Query: 302 PNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLWE-VC 345
GT+ Y PE I + + A +++LG++L++ VC
Sbjct: 171 -----GTRVYSPPEW----IRYHRYHG-RSAAVWSLGILLYDMVC 205
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 14/156 (8%)
Query: 139 SLSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYI 196
+ IG+G YG V+ +NVA+K + + E I +LR IL +
Sbjct: 31 EIKHLIGRGSYGYVYLAYDKNANKNVAIK------KVNRMFEDLIDCKRILREITILNRL 84
Query: 197 GSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH--LHTEIF 254
SD R L + F LY L + ++ K + + V L+ +
Sbjct: 85 KSDYIIR--LHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLL 142
Query: 255 GTQ--GKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
G + + I HRD+K N L+ + + I DFGLA
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 37/223 (16%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHE- 190
+A + + + IGKG +G+V + H + V + R+E + R+ EI LR +
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 191 -----NILGYIGSDMTSRNS-CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
N++ ++ + T RN C L++ +LY+ + + ++ L +V
Sbjct: 155 KDNTMNVI-HMLENFTFRNHICMTFELLSM-----NLYELIKK-----NKFQGFSLPLVR 203
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA--DFGLAVSYSQLSNKMDIPP 302
H + K I H D+K +NIL+K G I DFG + Q
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTX---- 259
Query: 303 NPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
+ ++ Y +PE IL M D+++LG +L E+
Sbjct: 260 ---IQSRFYRAPEVILGARYGMPI-------DMWSLGCILAEL 292
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 32/125 (25%)
Query: 261 AIAHRDIKSKNILVKTNGTCVIADFGLA--VSYSQLSNKMDIPPNPR------------- 305
I HRD+K N LV + + + DFGLA V Y + N +P +PR
Sbjct: 176 GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ-LPISPREDDMNLVTFPHTK 234
Query: 306 ---------VGTKRYMSPEILDESINMDCFESFKKA-DIYALGLVLWEVCRRTKANGIFE 355
V T+ Y +PE++ E++ +A D++++G + E+ K N +
Sbjct: 235 NLKRQLTGHVVTRWYRAPELI------LLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288
Query: 356 EYKAP 360
+ P
Sbjct: 289 ADRGP 293
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 37/223 (16%)
Query: 134 LAKQISLSECIGKGRYGEVWRGVWHGENVAVKIFFSRDEASWSRET--EIYSTVLLRHE- 190
+A + + + IGKG +G+V + H + V + R+E + R+ EI LR +
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 191 -----NILGYIGSDMTSRNS-CTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVN 244
N++ ++ + T RN C L++ +LY+ + + + L +V
Sbjct: 155 KDNTMNVI-HMLENFTFRNHICMTFELLSM-----NLYELIKKN-----KFQGFSLPLVR 203
Query: 245 GLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCVIA--DFGLAVSYSQLSNKMDIPP 302
H + K I H D+K +NIL+K G I DFG + Q
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTX---- 259
Query: 303 NPRVGTKRYMSPE-ILDESINMDCFESFKKADIYALGLVLWEV 344
+ ++ Y +PE IL M D+++LG +L E+
Sbjct: 260 ---IQSRFYRAPEVILGARYGMPI-------DMWSLGCILAEL 292
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 81
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 141 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 185
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 186 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTEP----CYTPYYVAPEVLG 190
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D+++LG++++
Sbjct: 191 PEKYDKSC-------DMWSLGVIMY 208
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 33/202 (16%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTV-LLR 188
R + + G+G +G V G G +VA+K +D +RE +I + +L
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVI-QDPRFRNRELQIMQDLAVLH 77
Query: 189 HENILG-----YIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHH--QMMKICLS 241
H NI+ Y + R+ L +V Y + D L+R N++ Q+ +
Sbjct: 78 HPNIVQLQSYFYTLGERDRRD--IYLNVVMEY-----VPDTLHRCCRNYYRRQVAPPPIL 130
Query: 242 IVNGLVHLHTEIFGTQGKPAI--AHRDIKSKNILV-KTNGTCVIADFGLAVSYSQLSNKM 298
I L L I G P++ HRDIK N+LV + +GT + DFG A S
Sbjct: 131 IKVFLFQLIRSI-GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS------ 183
Query: 299 DIPPNPRVG---TKRYMSPEIL 317
P P V ++ Y +PE++
Sbjct: 184 --PSEPNVAYICSRYYRAPELI 203
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 264 HRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---VGTKRYMSPEIL 317
HRD+K N L+ K I DFGLA Y IP GT RY
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY------ 179
Query: 318 DESINMDC-FESFKKADIYALGLVL 341
SIN E ++ D+ +LG VL
Sbjct: 180 -ASINTHLGIEQSRRDDLESLGYVL 203
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 41/211 (19%)
Query: 144 IGKGRYGEVWRGVWHGEN--VAVKIFFSRDEASWSRET------EIYSTVLLRHENILGY 195
+G+G + + V N AVKI R EA+ +E E + ++ HE
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
Query: 196 IGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTT-LNHHQMMKICLSIVNGLVHLHTEIF 254
+ + +LV + G L++ + + + + I +V+ + H+H
Sbjct: 79 LHT-----------FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD--- 124
Query: 255 GTQGKPAIAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRY 311
+ HRD+K +N+L N I DFG A +L + P T Y
Sbjct: 125 -----VGVVHRDLKPENLLFTDENDNLEIKIIDFGFA----RLKPPDNQPLKTPCFTLHY 175
Query: 312 MSPEILDESINMDCFESFKKADIYALGLVLW 342
+PE+L N + ++ + D+++LG++L+
Sbjct: 176 AAPELL----NQNGYD--ESCDLWSLGVILY 200
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 264 HRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---VGTKRYMSPEIL 317
HRD+K N L+ K I DFGLA Y IP GT RY
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY------ 181
Query: 318 DESINMDC-FESFKKADIYALGLVL 341
SIN E ++ D+ +LG VL
Sbjct: 182 -ASINTHLGIEQSRRDDLESLGYVL 205
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 264 HRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPR---VGTKRYMSPEIL 317
HRD+K N L+ K I DFGLA Y IP GT RY
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY------ 181
Query: 318 DESINMDC-FESFKKADIYALGLVL 341
SIN E ++ D+ +LG VL
Sbjct: 182 -ASINTHLGIEQSRRDDLESLGYVL 205
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 82
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 141
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 142 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 186
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 187 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 35/219 (15%)
Query: 144 IGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWS---RETEIYSTVLLRHENI------ 192
+G G G V+ V + + VA+K D S RE +I L H+NI
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR--LDHDNIVKVFEI 76
Query: 193 LGYIGSDMT----SRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH 248
LG GS +T S +++V Y L + L + L ++ GL +
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKY 135
Query: 249 LHTEIFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLA-VSYSQLSNKMDIPPNPRV 306
+H+ + HRD+K N+ + T + I DFGLA + S+K + + +
Sbjct: 136 IHSA--------NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHL--SEGL 185
Query: 307 GTKRYMSPEILDESINMDCFESFKKADIYALGLVLWEVC 345
TK Y SP +L N K D++A G + E+
Sbjct: 186 VTKWYRSPRLLLSPNNYT-----KAIDMWAAGCIFAEML 219
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 81
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 141 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 185
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 186 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 81
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 141 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 185
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 186 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 216
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 81
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 141 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 185
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 186 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 216
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 16/85 (18%)
Query: 262 IAHRDIKSKNILV---KTNGTCVIADFGLAVSYSQLSNKMDIPPNPRVGTKRYMSPEILD 318
IAHRD+K +N+L + N + DFG A + N + P T Y++PE+L
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS-HNSLTTP----CYTPYYVAPEVLG 236
Query: 319 -ESINMDCFESFKKADIYALGLVLW 342
E + C D ++LG++ +
Sbjct: 237 PEKYDKSC-------DXWSLGVIXY 254
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 93
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 152
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 153 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 197
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 198 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 94
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 153
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 154 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 198
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 199 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 93
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 152
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 153 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 197
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 198 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 100
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 159
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 160 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 204
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 205 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 89
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 148
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 149 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 193
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 194 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 224
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 85
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 144
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 145 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 189
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 190 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 14/155 (9%)
Query: 140 LSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSRETEIYSTVLLRHENILGYIG 197
+ IG+G YG V+ +NVA+K + + E I +LR IL +
Sbjct: 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIK------KVNRMFEDLIDCKRILREITILNRLK 83
Query: 198 SDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICLSIVNGLVH--LHTEIFG 255
SD R L + F LY L + ++ K + + + L+ + G
Sbjct: 84 SDYIIR--LYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 256 TQ--GKPAIAHRDIKSKNILVKTNGTCVIADFGLA 288
+ I HRD+K N L+ + + + DFGLA
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 86
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 145
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 146 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 190
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 191 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 221
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 109
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 168
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 169 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 213
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 214 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 244
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CVIADFGLAVSYSQLSNKMDIP 301
+ GL +LH+ I H D+K+ N+L+ ++G+ + DFG AV D+
Sbjct: 176 LEGLEYLHSR--------RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 302 PNPRV-GTKRYMSPEIL 317
+ GT+ +M+PE++
Sbjct: 228 TGDYIPGTETHMAPEVV 244
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K + +A +RE +I L H NI L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QGKAFKNRELQIMRK--LDHCNIVRLRYF 81
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 141 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 185
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 186 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 216
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 115
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 174
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 175 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 219
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 220 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K + +A +RE +I L H NI L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QGKAFKNRELQIMRK--LDHCNIVRLRYF 81
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 141 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 185
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 186 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 216
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 115
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 174
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 175 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 219
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 220 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 250
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 119
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 178
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 179 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 223
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 224 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 117
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 176
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 177 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 221
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 222 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 252
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 46/224 (20%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL--- 193
L E IGKG + V R + G+ AVKI D A ++ + + L R +I
Sbjct: 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIV---DVAKFTSSPGLSTEDLKREASICHML 83
Query: 194 --GYIGSDMTSRNSCTQLWLVTHYHSFGSL-YDHLNRT--------TLNHHQMMKICLSI 242
+I + + +S L++V + L ++ + R + H M +I
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 139
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMD 299
+ L + H I HRD+K +L+ K N V + FG+A+ +
Sbjct: 140 LEALRYCHDN--------NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---- 187
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLW 342
+ RVGT +M+PE++ E + K D++ G++L+
Sbjct: 188 LVAGGRVGTPHFMAPEVVKR-------EPYGKPVDVWGCGVILF 224
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 46/224 (20%)
Query: 139 SLSECIGKGRYGEVWRGVWH--GENVAVKIFFSRDEASWSRETEIYSTVLLRHENIL--- 193
L E IGKG + V R + G+ AVKI D A ++ + + L R +I
Sbjct: 29 ELCEVIGKGPFSVVRRCINRETGQQFAVKIV---DVAKFTSSPGLSTEDLKREASICHML 85
Query: 194 --GYIGSDMTSRNSCTQLWLVTHYHSFGSL-YDHLNRT--------TLNHHQMMKICLSI 242
+I + + +S L++V + L ++ + R + H M +I
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 141
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILV--KTNGTCV-IADFGLAVSYSQLSNKMD 299
+ L + H I HRD+K +L+ K N V + FG+A+ +
Sbjct: 142 LEALRYCHDN--------NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---- 189
Query: 300 IPPNPRVGTKRYMSPEILDESINMDCFESF-KKADIYALGLVLW 342
+ RVGT +M+PE++ E + K D++ G++L+
Sbjct: 190 LVAGGRVGTPHFMAPEVVKR-------EPYGKPVDVWGCGVILF 226
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K +D+ +RE +I L H NI L Y
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIMRK--LDHCNIVRLRYF 160
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 219
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 220 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSYICS 264
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + D+++ G VL E+
Sbjct: 265 RYYRAPELI-----FGATDYTSSIDVWSAGCVLAEL 295
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSR---------ETE 180
+ L + +S+ +G G GEV + VA+KI R A S ETE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL 240
I L H I+ + + ++V G L+D + K+
Sbjct: 66 IEILKKLNHPCII-----KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 241 -SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CV--IADFGLAVSYSQLSN 296
++ + +LH I HRD+K +N+L+ + C+ I DFG + + S
Sbjct: 121 YQMLLAVQYLHEN--------GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
+ GT Y++PE+L +++ + D ++LG++L+
Sbjct: 173 MRTL-----CGTPTYLAPEVL---VSVGTAGYNRAVDCWSLGVILF 210
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 32/187 (17%)
Query: 144 IGKGRYGEVWRGV--WHGENVAVKIFFSRDEASWSRETEIYSTVLLR---HENILGYIGS 198
+G+G YGEV++ + E VA+K E T I LL+ H NI+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL--K 99
Query: 199 DMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL-SIVNGLVHLHTEIFGTQ 257
+ N +L L+ Y + L ++++ +++K L ++NG+ H+
Sbjct: 100 SVIHHNH--RLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR----- 151
Query: 258 GKPAIAHRDIKSKNILVKTNGTC-----VIADFGLAVSYS----QLSNKMDI----PPNP 304
HRD+K +N+L+ + I DFGLA ++ Q ++++ PP
Sbjct: 152 ---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI 208
Query: 305 RVGTKRY 311
+G++ Y
Sbjct: 209 LLGSRHY 215
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 141 SECIGKGRYGEVWRGVW--HGENVAVKIFFSRDEASWSRETEIYSTVLLRHENI--LGYI 196
++ IG G +G V++ GE VA+K + +A +RE +I L H NI L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QGKAFKNRELQIMRK--LDHCNIVRLRYF 81
Query: 197 GSDMTSRNSCTQLWLVTHY--HSFGSLYDHLNRT--TLNHHQMMKICLSIVNGLVHLHTE 252
+ L LV Y + + H +R TL + + L ++H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS- 140
Query: 253 IFGTQGKPAIAHRDIKSKNILVKTNGTCV-IADFGLAVSYSQLSNKMDIPPNPRVG---T 308
FG I HRDIK +N+L+ + + + DFG S K + P V +
Sbjct: 141 -FG------ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQLVRGEPNVSXICS 185
Query: 309 KRYMSPEILDESINMDCFESFKKADIYALGLVLWEV 344
+ Y +PE++ + + D+++ G VL E+
Sbjct: 186 RYYRAPELIFGATDYT-----SSIDVWSAGCVLAEL 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSR---------ETE 180
+ L + +S+ +G G GEV + VA+KI R A S ETE
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL 240
I L H I+ + + ++V G L+D + K+
Sbjct: 65 IEILKKLNHPCII-----KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 241 -SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CV--IADFGLAVSYSQLSN 296
++ + +LH I HRD+K +N+L+ + C+ I DFG + + S
Sbjct: 120 YQMLLAVQYLHEN--------GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 171
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
+ GT Y++PE+L +++ + D ++LG++L+
Sbjct: 172 MRTL-----CGTPTYLAPEVL---VSVGTAGYNRAVDCWSLGVILF 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSR---------ETE 180
+ L + +S+ +G G GEV + VA+KI R A S ETE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL 240
I L H I+ + + ++V G L+D + K+
Sbjct: 66 IEILKKLNHPCII-----KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 241 -SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CV--IADFGLAVSYSQLSN 296
++ + +LH I HRD+K +N+L+ + C+ I DFG + + S
Sbjct: 121 YQMLLAVQYLHEN--------GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
+ GT Y++PE+L +++ + D ++LG++L+
Sbjct: 173 MRTL-----CGTPTYLAPEVL---VSVGTAGYNRAVDCWSLGVILF 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSR---------ETE 180
+ L + +S+ +G G GEV + VA+KI R A S ETE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL 240
I L H I+ + + ++V G L+D + K+
Sbjct: 66 IEILKKLNHPCII-----KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 241 -SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CV--IADFGLAVSYSQLSN 296
++ + +LH I HRD+K +N+L+ + C+ I DFG + + S
Sbjct: 121 YQMLLAVQYLHEN--------GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
+ GT Y++PE+L +++ + D ++LG++L+
Sbjct: 173 MRTL-----CGTPTYLAPEVL---VSVGTAGYNRAVDCWSLGVILF 210
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 36/226 (15%)
Query: 132 RTLAKQISLSECIGKGRYGEVWRGVWHG--ENVAVKIFFSRDEASWSR---------ETE 180
+ L + +S+ +G G GEV + VA+KI R A S ETE
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 181 IYSTVLLRHENILGYIGSDMTSRNSCTQLWLVTHYHSFGSLYDHLNRTTLNHHQMMKICL 240
I L H I+ + + ++V G L+D + K+
Sbjct: 72 IEILKKLNHPCII-----KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 241 -SIVNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CV--IADFGLAVSYSQLSN 296
++ + +LH I HRD+K +N+L+ + C+ I DFG + + S
Sbjct: 127 YQMLLAVQYLHEN--------GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
Query: 297 KMDIPPNPRVGTKRYMSPEILDESINMDCFESFKKADIYALGLVLW 342
+ GT Y++PE+L +++ + D ++LG++L+
Sbjct: 179 MRTL-----CGTPTYLAPEVL---VSVGTAGYNRAVDCWSLGVILF 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 243 VNGLVHLHTEIFGTQGKPAIAHRDIKSKNILVKTNGT-CVIADFGLAVSYSQLS-NKMDI 300
+ GL +LHT I H D+K+ N+L+ ++G+ + DFG A+ K +
Sbjct: 174 LEGLEYLHTR--------RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 225
Query: 301 PPNPRVGTKRYMSPEIL 317
+ GT+ +M+PE++
Sbjct: 226 TGDYIPGTETHMAPEVV 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.137 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,612,668
Number of Sequences: 62578
Number of extensions: 494311
Number of successful extensions: 3139
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 450
Number of HSP's that attempted gapping in prelim test: 1692
Number of HSP's gapped (non-prelim): 1114
length of query: 443
length of database: 14,973,337
effective HSP length: 102
effective length of query: 341
effective length of database: 8,590,381
effective search space: 2929319921
effective search space used: 2929319921
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (25.0 bits)