Query psy1489
Match_columns 229
No_of_seqs 214 out of 1770
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 23:26:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1489.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1489hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 100.0 1E-41 3.5E-46 273.0 15.2 179 38-228 2-183 (191)
2 2px2_A Genome polyprotein [con 100.0 2.4E-37 8.3E-42 252.7 9.6 162 39-226 52-226 (269)
3 3gcz_A Polyprotein; flavivirus 100.0 2.5E-35 8.6E-40 244.5 12.3 163 39-226 69-244 (282)
4 3evf_A RNA-directed RNA polyme 100.0 7.4E-35 2.5E-39 241.4 14.4 162 40-226 54-227 (277)
5 2plw_A Ribosomal RNA methyltra 100.0 1.8E-33 6.1E-38 225.2 17.8 181 40-229 1-199 (201)
6 3eld_A Methyltransferase; flav 100.0 1.7E-33 5.9E-38 234.8 14.6 161 39-226 60-234 (300)
7 2nyu_A Putative ribosomal RNA 100.0 1.5E-31 5.1E-36 213.0 17.4 190 40-229 1-190 (196)
8 3p8z_A Mtase, non-structural p 100.0 3E-29 1E-33 201.8 14.8 158 39-224 57-227 (267)
9 1ej0_A FTSJ; methyltransferase 100.0 3.9E-27 1.3E-31 183.0 19.5 179 40-227 1-179 (180)
10 2oxt_A Nucleoside-2'-O-methylt 99.9 1.1E-27 3.8E-32 200.6 13.7 158 40-227 54-229 (265)
11 2p41_A Type II methyltransfera 99.9 1.2E-27 4.1E-32 204.2 13.6 160 39-228 61-236 (305)
12 3lkz_A Non-structural protein 99.9 6.3E-27 2.1E-31 194.1 13.1 158 40-224 74-245 (321)
13 3r24_A NSP16, 2'-O-methyl tran 99.9 2.2E-27 7.4E-32 196.5 7.7 147 59-229 107-260 (344)
14 2wa2_A Non-structural protein 99.9 1.6E-26 5.6E-31 194.5 12.6 157 40-226 62-236 (276)
15 2xyq_A Putative 2'-O-methyl tr 99.9 1E-22 3.6E-27 172.1 8.0 147 58-229 60-214 (290)
16 2hwk_A Helicase NSP2; rossman 99.8 1.2E-19 4.2E-24 149.0 9.0 137 69-228 149-299 (320)
17 3hp7_A Hemolysin, putative; st 99.6 1.1E-15 3.7E-20 129.0 11.6 157 40-225 64-249 (291)
18 3lpm_A Putative methyltransfer 99.6 8.6E-16 2.9E-20 127.4 9.8 152 59-228 46-219 (259)
19 3id6_C Fibrillarin-like rRNA/T 99.6 1.2E-15 4.1E-20 124.9 10.4 155 41-225 57-230 (232)
20 4auk_A Ribosomal RNA large sub 99.6 2.2E-15 7.6E-20 130.1 12.0 88 39-146 182-280 (375)
21 2ozv_A Hypothetical protein AT 99.6 5.4E-15 1.9E-19 122.9 11.5 155 59-225 34-210 (260)
22 4df3_A Fibrillarin-like rRNA/T 99.6 5.9E-15 2E-19 120.7 9.8 99 59-184 75-182 (233)
23 4gek_A TRNA (CMO5U34)-methyltr 99.6 5E-15 1.7E-19 123.4 8.8 102 59-187 68-181 (261)
24 3mti_A RRNA methylase; SAM-dep 99.5 9.8E-15 3.4E-19 114.5 7.7 145 59-224 20-183 (185)
25 4hg2_A Methyltransferase type 99.5 1.3E-14 4.5E-19 120.6 8.9 97 60-188 38-139 (257)
26 1nt2_A Fibrillarin-like PRE-rR 99.5 1.5E-13 5.2E-18 110.7 12.6 138 59-226 55-210 (210)
27 4dzr_A Protein-(glutamine-N5) 99.5 1.4E-13 4.6E-18 109.7 11.7 149 60-227 29-206 (215)
28 3e05_A Precorrin-6Y C5,15-meth 99.5 8E-14 2.7E-18 111.1 7.9 117 59-208 38-166 (204)
29 3dh0_A SAM dependent methyltra 99.5 2.6E-13 8.8E-18 109.0 10.7 122 59-208 35-180 (219)
30 3m4x_A NOL1/NOP2/SUN family pr 99.5 4.6E-13 1.6E-17 119.6 12.3 126 59-200 103-253 (456)
31 3eey_A Putative rRNA methylase 99.5 1.1E-13 3.6E-18 109.7 7.3 150 59-227 20-189 (197)
32 3h2b_A SAM-dependent methyltra 99.4 2.8E-13 9.4E-18 107.6 9.3 132 62-226 42-195 (203)
33 1dus_A MJ0882; hypothetical pr 99.4 2.5E-13 8.6E-18 106.3 8.9 119 59-208 50-181 (194)
34 3ujc_A Phosphoethanolamine N-m 99.4 9.3E-13 3.2E-17 108.4 12.7 99 59-185 53-160 (266)
35 1ixk_A Methyltransferase; open 99.4 2.7E-13 9.3E-18 115.8 9.7 124 59-199 116-264 (315)
36 2b3t_A Protein methyltransfera 99.4 1.5E-12 5.2E-17 108.7 13.7 142 60-225 108-275 (276)
37 1yzh_A TRNA (guanine-N(7)-)-me 99.4 2.2E-13 7.4E-18 109.6 8.2 130 60-208 40-181 (214)
38 2frx_A Hypothetical protein YE 99.4 1.1E-12 3.7E-17 118.1 13.4 124 61-200 117-265 (479)
39 3e8s_A Putative SAM dependent 99.4 1.1E-12 3.7E-17 105.3 12.0 168 29-225 21-226 (227)
40 3evz_A Methyltransferase; NYSG 99.4 1.3E-12 4.6E-17 105.7 12.5 132 59-209 53-205 (230)
41 1sqg_A SUN protein, FMU protei 99.4 9.2E-13 3.1E-17 117.0 12.6 125 59-200 244-393 (429)
42 3grz_A L11 mtase, ribosomal pr 99.4 2.3E-13 7.9E-18 108.4 7.8 114 59-207 58-183 (205)
43 3a27_A TYW2, uncharacterized p 99.4 5.1E-14 1.7E-18 117.9 4.0 135 59-227 117-268 (272)
44 2fca_A TRNA (guanine-N(7)-)-me 99.4 3.5E-13 1.2E-17 108.6 8.7 128 60-206 37-176 (213)
45 3opn_A Putative hemolysin; str 99.4 3.7E-13 1.3E-17 110.2 8.8 157 40-225 16-201 (232)
46 3mb5_A SAM-dependent methyltra 99.4 3.7E-13 1.3E-17 110.8 9.0 115 59-207 91-220 (255)
47 3ajd_A Putative methyltransfer 99.4 7.4E-13 2.5E-17 110.8 10.8 135 59-207 81-236 (274)
48 3njr_A Precorrin-6Y methylase; 99.4 8.2E-13 2.8E-17 105.8 10.4 106 59-200 53-170 (204)
49 2bm8_A Cephalosporin hydroxyla 99.4 4.1E-13 1.4E-17 110.0 8.7 138 61-225 81-233 (236)
50 3m6w_A RRNA methylase; rRNA me 99.4 5.4E-13 1.8E-17 119.3 10.1 131 59-207 99-254 (464)
51 2yxl_A PH0851 protein, 450AA l 99.4 4.9E-13 1.7E-17 119.5 9.8 127 59-200 257-408 (450)
52 2ipx_A RRNA 2'-O-methyltransfe 99.4 2.5E-13 8.5E-18 110.6 7.1 116 42-185 59-183 (233)
53 3cgg_A SAM-dependent methyltra 99.4 1.3E-12 4.3E-17 102.4 10.8 139 59-225 44-194 (195)
54 3hm2_A Precorrin-6Y C5,15-meth 99.4 6.3E-13 2.2E-17 103.1 8.5 108 59-201 23-144 (178)
55 4fsd_A Arsenic methyltransfera 99.4 4.3E-13 1.5E-17 117.4 8.4 128 59-208 81-250 (383)
56 3e23_A Uncharacterized protein 99.4 2.5E-13 8.4E-18 108.6 6.2 138 59-226 41-200 (211)
57 3fpf_A Mtnas, putative unchara 99.4 5.5E-13 1.9E-17 112.5 8.3 119 59-211 120-252 (298)
58 3dli_A Methyltransferase; PSI- 99.4 3.5E-13 1.2E-17 110.0 6.8 124 57-207 37-182 (240)
59 1yb2_A Hypothetical protein TA 99.4 7.1E-13 2.4E-17 110.8 8.8 116 59-208 108-236 (275)
60 2a14_A Indolethylamine N-methy 99.4 2.7E-13 9.1E-18 112.7 6.1 147 60-229 54-263 (263)
61 3q87_B N6 adenine specific DNA 99.4 5.8E-13 2E-17 103.6 7.6 124 60-208 22-148 (170)
62 1jsx_A Glucose-inhibited divis 99.4 1.2E-12 4.2E-17 104.1 9.7 129 61-225 65-204 (207)
63 3dtn_A Putative methyltransfer 99.4 1.1E-12 3.8E-17 106.4 9.5 102 59-188 42-152 (234)
64 3p9n_A Possible methyltransfer 99.4 6.6E-13 2.2E-17 104.6 7.6 101 60-187 43-156 (189)
65 3pfg_A N-methyltransferase; N, 99.4 1.7E-12 5.8E-17 107.2 9.9 96 59-183 48-150 (263)
66 1pjz_A Thiopurine S-methyltran 99.4 3E-13 1E-17 108.1 5.1 96 59-182 20-138 (203)
67 3sso_A Methyltransferase; macr 99.4 1.9E-12 6.4E-17 113.2 10.4 102 60-184 215-324 (419)
68 3g5l_A Putative S-adenosylmeth 99.4 9E-13 3.1E-17 108.2 8.0 94 61-184 44-145 (253)
69 3dxy_A TRNA (guanine-N(7)-)-me 99.4 2.2E-13 7.6E-18 110.4 4.3 122 60-199 33-165 (218)
70 2gb4_A Thiopurine S-methyltran 99.4 7.9E-13 2.7E-17 109.5 7.6 118 60-206 67-224 (252)
71 3ou2_A SAM-dependent methyltra 99.4 9.2E-13 3.1E-17 105.3 7.8 102 55-186 40-148 (218)
72 1g8a_A Fibrillarin-like PRE-rR 99.4 4.8E-12 1.7E-16 102.4 11.8 98 59-183 71-177 (227)
73 1xtp_A LMAJ004091AAA; SGPP, st 99.4 8.2E-12 2.8E-16 102.2 12.8 122 60-209 92-238 (254)
74 3hnr_A Probable methyltransfer 99.4 1.5E-12 5.3E-17 104.4 8.2 95 60-184 44-145 (220)
75 2frn_A Hypothetical protein PH 99.4 1.7E-12 5.7E-17 108.9 8.7 113 59-206 123-253 (278)
76 3f4k_A Putative methyltransfer 99.4 5.2E-12 1.8E-16 103.7 11.5 95 59-184 44-150 (257)
77 1vl5_A Unknown conserved prote 99.4 6.4E-13 2.2E-17 109.7 6.0 95 59-184 35-140 (260)
78 1xdz_A Methyltransferase GIDB; 99.4 2.5E-12 8.4E-17 105.2 9.4 94 60-183 69-173 (240)
79 3hem_A Cyclopropane-fatty-acyl 99.4 2.4E-12 8.3E-17 108.7 9.6 106 59-188 70-187 (302)
80 3orh_A Guanidinoacetate N-meth 99.3 1.7E-13 5.7E-18 112.3 1.9 102 59-183 58-169 (236)
81 3ofk_A Nodulation protein S; N 99.3 3.9E-12 1.3E-16 101.9 9.7 121 59-208 49-187 (216)
82 3adn_A Spermidine synthase; am 99.3 9.5E-12 3.2E-16 105.2 12.1 141 60-224 82-243 (294)
83 3ckk_A TRNA (guanine-N(7)-)-me 99.3 8.3E-13 2.8E-17 108.2 5.4 122 60-199 45-183 (235)
84 3tma_A Methyltransferase; thum 99.3 1.6E-11 5.4E-16 106.2 13.7 107 59-185 201-318 (354)
85 3dlc_A Putative S-adenosyl-L-m 99.3 2.5E-12 8.5E-17 102.6 7.8 94 60-184 43-148 (219)
86 1nkv_A Hypothetical protein YJ 99.3 1.7E-12 5.8E-17 106.5 6.8 95 59-184 34-140 (256)
87 3u81_A Catechol O-methyltransf 99.3 3.1E-12 1.1E-16 103.3 8.0 114 60-200 57-186 (221)
88 2b9e_A NOL1/NOP2/SUN domain fa 99.3 7.3E-12 2.5E-16 106.6 10.6 126 59-200 100-253 (309)
89 3ege_A Putative methyltransfer 99.3 3.1E-12 1.1E-16 105.8 8.0 96 59-186 32-132 (261)
90 3sm3_A SAM-dependent methyltra 99.3 6E-12 2E-16 101.6 9.5 139 59-225 28-226 (235)
91 3ggd_A SAM-dependent methyltra 99.3 6.4E-12 2.2E-16 102.6 9.8 105 59-187 54-166 (245)
92 2ex4_A Adrenal gland protein A 99.3 2.8E-12 9.5E-17 104.7 7.5 121 61-209 79-225 (241)
93 3kkz_A Uncharacterized protein 99.3 6.3E-13 2.2E-17 110.2 3.5 95 59-184 44-150 (267)
94 3ccf_A Cyclopropane-fatty-acyl 99.3 2E-12 6.7E-17 108.0 6.5 98 59-188 55-158 (279)
95 4dcm_A Ribosomal RNA large sub 99.3 9.7E-12 3.3E-16 108.6 11.1 120 60-207 221-354 (375)
96 2p7i_A Hypothetical protein; p 99.3 5.9E-13 2E-17 108.3 3.1 94 60-185 41-142 (250)
97 1y8c_A S-adenosylmethionine-de 99.3 4.8E-12 1.7E-16 102.8 8.4 138 60-226 36-245 (246)
98 2g72_A Phenylethanolamine N-me 99.3 2.8E-12 9.5E-17 107.6 6.9 143 61-228 71-281 (289)
99 3d2l_A SAM-dependent methyltra 99.3 7.3E-12 2.5E-16 101.8 9.3 95 59-183 31-136 (243)
100 2xvm_A Tellurite resistance pr 99.3 3.4E-12 1.2E-16 100.6 6.9 117 60-207 31-171 (199)
101 3mgg_A Methyltransferase; NYSG 99.3 1.6E-12 5.5E-17 108.1 5.3 101 55-184 31-142 (276)
102 2nxc_A L11 mtase, ribosomal pr 99.3 1.2E-11 4.2E-16 102.3 10.5 113 59-207 118-242 (254)
103 2p35_A Trans-aconitate 2-methy 99.3 6.3E-13 2.1E-17 109.3 2.7 98 59-186 31-134 (259)
104 1l3i_A Precorrin-6Y methyltran 99.3 6.2E-12 2.1E-16 98.1 7.9 115 59-209 31-159 (192)
105 2b25_A Hypothetical protein; s 99.3 2.9E-12 9.9E-17 110.0 6.3 110 59-199 103-234 (336)
106 3r3h_A O-methyltransferase, SA 99.3 2.7E-11 9.4E-16 99.5 11.9 99 60-183 59-169 (242)
107 2pxx_A Uncharacterized protein 99.3 7.4E-12 2.5E-16 99.7 8.2 109 59-187 40-162 (215)
108 3mq2_A 16S rRNA methyltransfer 99.3 1.3E-11 4.4E-16 99.1 9.6 101 59-184 25-140 (218)
109 1o54_A SAM-dependent O-methylt 99.3 4.5E-12 1.5E-16 105.9 7.1 116 59-208 110-238 (277)
110 3g5t_A Trans-aconitate 3-methy 99.3 3E-12 1E-16 107.9 6.1 101 60-183 35-148 (299)
111 2pwy_A TRNA (adenine-N(1)-)-me 99.3 2.7E-12 9.3E-17 105.4 5.7 113 59-204 94-219 (258)
112 3g89_A Ribosomal RNA small sub 99.3 9.8E-12 3.3E-16 102.7 9.0 94 60-183 79-183 (249)
113 3l8d_A Methyltransferase; stru 99.3 7.3E-12 2.5E-16 101.8 8.0 96 59-185 51-154 (242)
114 1xxl_A YCGJ protein; structura 99.3 2.1E-12 7.1E-17 105.5 4.6 97 59-186 19-126 (239)
115 3iv6_A Putative Zn-dependent a 99.3 2E-12 6.9E-17 107.5 4.5 137 18-187 9-151 (261)
116 3gjy_A Spermidine synthase; AP 99.3 1.5E-11 5E-16 104.9 9.9 138 64-224 92-245 (317)
117 3g07_A 7SK snRNA methylphospha 99.3 7.5E-12 2.6E-16 105.5 7.9 103 61-184 46-220 (292)
118 3vc1_A Geranyl diphosphate 2-C 99.3 8.5E-12 2.9E-16 105.9 8.3 96 59-185 115-222 (312)
119 3bkw_A MLL3908 protein, S-aden 99.3 3.9E-12 1.3E-16 103.4 5.9 95 60-184 42-144 (243)
120 3dr5_A Putative O-methyltransf 99.3 3.2E-12 1.1E-16 103.8 5.1 94 61-183 56-162 (221)
121 1i9g_A Hypothetical protein RV 99.3 6.5E-12 2.2E-16 104.7 6.9 117 59-208 97-229 (280)
122 3dmg_A Probable ribosomal RNA 99.3 2.3E-11 7.8E-16 106.5 10.5 118 61-207 233-360 (381)
123 1fbn_A MJ fibrillarin homologu 99.3 1.6E-11 5.4E-16 99.8 8.9 97 59-183 72-177 (230)
124 3uwp_A Histone-lysine N-methyl 99.3 2.5E-11 8.5E-16 106.4 10.5 97 59-183 171-287 (438)
125 1ve3_A Hypothetical protein PH 99.3 3.3E-12 1.1E-16 102.8 4.6 98 59-185 36-143 (227)
126 1kpg_A CFA synthase;, cyclopro 99.3 1.7E-11 6E-16 102.4 9.2 97 59-186 62-170 (287)
127 3p2e_A 16S rRNA methylase; met 99.3 1.1E-11 3.8E-16 100.8 7.7 100 60-182 23-137 (225)
128 3jwg_A HEN1, methyltransferase 99.3 6.9E-12 2.3E-16 100.7 6.4 98 60-184 28-141 (219)
129 3jwh_A HEN1; methyltransferase 99.2 1.8E-11 6E-16 98.3 8.7 98 60-184 28-141 (217)
130 2yxd_A Probable cobalt-precorr 99.2 1E-11 3.5E-16 96.2 7.1 117 59-213 33-160 (183)
131 3i9f_A Putative type 11 methyl 99.2 6.4E-12 2.2E-16 96.9 5.8 115 59-208 15-147 (170)
132 2p8j_A S-adenosylmethionine-de 99.2 4.5E-12 1.5E-16 100.8 5.0 100 59-186 21-130 (209)
133 2yvl_A TRMI protein, hypotheti 99.2 1.8E-11 6.1E-16 100.0 8.5 112 59-206 89-212 (248)
134 3bxo_A N,N-dimethyltransferase 99.2 1.2E-11 4E-16 100.3 7.3 99 60-186 39-143 (239)
135 1ri5_A MRNA capping enzyme; me 99.2 1.7E-11 5.9E-16 102.5 8.5 102 59-186 62-176 (298)
136 3tfw_A Putative O-methyltransf 99.2 9.6E-12 3.3E-16 102.4 6.7 96 60-183 62-169 (248)
137 3m33_A Uncharacterized protein 99.2 5.8E-12 2E-16 102.0 5.3 109 59-204 46-162 (226)
138 2vdv_E TRNA (guanine-N(7)-)-me 99.2 8.6E-12 2.9E-16 102.4 6.3 106 60-184 48-173 (246)
139 2o57_A Putative sarcosine dime 99.2 3.2E-12 1.1E-16 107.4 3.8 97 59-185 80-188 (297)
140 2zfu_A Nucleomethylin, cerebra 99.2 7.7E-11 2.6E-15 94.3 11.8 107 60-205 66-175 (215)
141 2vdw_A Vaccinia virus capping 99.2 4.4E-12 1.5E-16 107.7 4.6 108 60-186 47-171 (302)
142 2i62_A Nicotinamide N-methyltr 99.2 2E-11 6.7E-16 100.5 8.4 141 60-226 55-261 (265)
143 3bwc_A Spermidine synthase; SA 99.2 1.8E-11 6.2E-16 103.9 8.3 142 60-225 94-257 (304)
144 1zx0_A Guanidinoacetate N-meth 99.2 2.2E-12 7.7E-17 105.1 2.6 103 59-184 58-170 (236)
145 3bus_A REBM, methyltransferase 99.2 6.8E-12 2.3E-16 104.0 5.5 97 59-185 59-167 (273)
146 3ocj_A Putative exported prote 99.2 8E-12 2.8E-16 105.7 6.0 101 59-185 116-228 (305)
147 3duw_A OMT, O-methyltransferas 99.2 9.8E-12 3.4E-16 100.2 6.1 98 60-183 57-166 (223)
148 3lcc_A Putative methyl chlorid 99.2 2.1E-11 7.2E-16 99.0 8.1 135 62-226 67-226 (235)
149 3bgv_A MRNA CAP guanine-N7 met 99.2 1.3E-11 4.5E-16 104.7 7.1 114 60-198 33-166 (313)
150 2ift_A Putative methylase HI07 99.2 3.8E-12 1.3E-16 101.5 3.4 97 61-186 53-165 (201)
151 1p91_A Ribosomal RNA large sub 99.2 1E-11 3.5E-16 102.8 6.2 98 60-193 84-187 (269)
152 4htf_A S-adenosylmethionine-de 99.2 1.6E-11 5.5E-16 102.6 7.2 95 61-185 68-174 (285)
153 2pjd_A Ribosomal RNA small sub 99.2 2.4E-11 8.3E-16 104.7 8.4 119 60-207 195-323 (343)
154 2qe6_A Uncharacterized protein 99.2 6.2E-11 2.1E-15 99.2 10.6 108 61-187 77-199 (274)
155 3g2m_A PCZA361.24; SAM-depende 99.2 2.3E-11 8E-16 102.4 7.7 97 61-186 82-192 (299)
156 2ih2_A Modification methylase 99.2 3.9E-10 1.3E-14 99.2 15.9 123 60-200 38-184 (421)
157 2fk8_A Methoxy mycolic acid sy 99.2 4.5E-11 1.5E-15 101.5 9.4 99 59-188 88-198 (318)
158 3q7e_A Protein arginine N-meth 99.2 3.2E-11 1.1E-15 104.3 8.2 96 60-182 65-171 (349)
159 2yqz_A Hypothetical protein TT 99.2 1.1E-11 3.6E-16 102.0 4.9 94 59-183 37-140 (263)
160 3gu3_A Methyltransferase; alph 99.2 1.2E-11 4E-16 103.7 5.1 98 59-185 20-127 (284)
161 3tr6_A O-methyltransferase; ce 99.2 1.1E-11 3.7E-16 100.0 4.6 96 60-183 63-173 (225)
162 2fyt_A Protein arginine N-meth 99.2 6.7E-11 2.3E-15 101.9 9.8 96 59-181 62-168 (340)
163 3bkx_A SAM-dependent methyltra 99.2 1.1E-10 3.8E-15 96.8 10.8 102 59-186 41-161 (275)
164 4dmg_A Putative uncharacterize 99.2 6.3E-11 2.2E-15 104.0 9.5 120 59-200 212-343 (393)
165 2h00_A Methyltransferase 10 do 99.2 3.5E-10 1.2E-14 92.9 13.4 148 61-226 65-252 (254)
166 2esr_A Methyltransferase; stru 99.2 4.5E-11 1.6E-15 92.7 7.6 99 60-188 30-142 (177)
167 3ntv_A MW1564 protein; rossman 99.2 1.4E-11 4.9E-16 100.3 4.8 94 60-183 70-175 (232)
168 1wzn_A SAM-dependent methyltra 99.2 3.8E-11 1.3E-15 98.3 7.4 96 60-184 40-145 (252)
169 3m70_A Tellurite resistance pr 99.2 3.1E-11 1E-15 100.9 6.7 93 61-184 120-223 (286)
170 2igt_A SAM dependent methyltra 99.2 4.4E-11 1.5E-15 102.8 7.7 123 60-200 152-290 (332)
171 2kw5_A SLR1183 protein; struct 99.2 3.5E-11 1.2E-15 95.3 6.6 96 59-186 28-133 (202)
172 1nv8_A HEMK protein; class I a 99.2 5.2E-11 1.8E-15 100.2 7.9 137 61-227 123-283 (284)
173 3k6r_A Putative transferase PH 99.2 8.5E-11 2.9E-15 98.5 9.0 92 59-185 123-226 (278)
174 1i1n_A Protein-L-isoaspartate 99.1 1.4E-11 4.8E-16 99.5 3.5 94 59-186 75-184 (226)
175 1wxx_A TT1595, hypothetical pr 99.1 1.2E-10 4.2E-15 101.7 9.4 118 61-197 209-339 (382)
176 2gs9_A Hypothetical protein TT 99.1 2.3E-11 7.7E-16 97.0 4.2 96 60-188 35-136 (211)
177 2b78_A Hypothetical protein SM 99.1 1.6E-10 5.6E-15 101.1 9.9 123 60-200 211-348 (385)
178 2aot_A HMT, histamine N-methyl 99.1 3.4E-11 1.2E-15 101.2 5.4 108 60-185 51-173 (292)
179 1mjf_A Spermidine synthase; sp 99.1 5.4E-11 1.9E-15 99.8 6.6 139 60-225 74-238 (281)
180 1o9g_A RRNA methyltransferase; 99.1 4.2E-11 1.4E-15 98.4 5.7 108 61-182 51-212 (250)
181 1sui_A Caffeoyl-COA O-methyltr 99.1 6.1E-11 2.1E-15 97.7 6.6 96 60-183 78-189 (247)
182 2as0_A Hypothetical protein PH 99.1 1.6E-10 5.3E-15 101.5 9.3 131 60-208 216-364 (396)
183 1iy9_A Spermidine synthase; ro 99.1 4.5E-10 1.5E-14 94.0 11.7 141 61-225 75-235 (275)
184 3lbf_A Protein-L-isoaspartate 99.1 7.5E-11 2.6E-15 94.0 6.6 91 59-186 75-176 (210)
185 2avd_A Catechol-O-methyltransf 99.1 3.6E-11 1.2E-15 97.1 4.7 96 60-183 68-178 (229)
186 2fpo_A Methylase YHHF; structu 99.1 3.1E-11 1.1E-15 96.3 4.2 96 61-186 54-162 (202)
187 1inl_A Spermidine synthase; be 99.1 3.1E-10 1.1E-14 95.9 10.5 143 60-225 89-251 (296)
188 4fzv_A Putative methyltransfer 99.1 1.6E-10 5.4E-15 100.1 8.9 109 59-184 146-284 (359)
189 3cc8_A Putative methyltransfer 99.1 2E-11 6.8E-16 98.0 2.9 98 60-186 31-132 (230)
190 2fhp_A Methylase, putative; al 99.1 4.3E-11 1.5E-15 93.3 4.6 102 60-188 43-158 (187)
191 4hc4_A Protein arginine N-meth 99.1 9.2E-11 3.2E-15 102.2 7.1 93 61-181 83-186 (376)
192 3thr_A Glycine N-methyltransfe 99.1 2.4E-11 8.4E-16 101.7 3.3 105 60-185 56-176 (293)
193 2b2c_A Spermidine synthase; be 99.1 1.3E-10 4.3E-15 99.2 7.7 124 60-208 107-250 (314)
194 3r0q_C Probable protein argini 99.1 2.2E-10 7.5E-15 100.0 9.3 97 59-183 61-168 (376)
195 1dl5_A Protein-L-isoaspartate 99.1 9.1E-11 3.1E-15 100.0 6.6 92 59-184 73-175 (317)
196 2yx1_A Hypothetical protein MJ 99.1 5.4E-11 1.9E-15 102.3 5.1 103 59-201 193-307 (336)
197 2i7c_A Spermidine synthase; tr 99.1 8.6E-11 2.9E-15 98.8 6.1 124 60-207 77-219 (283)
198 1x19_A CRTF-related protein; m 99.1 1.3E-09 4.3E-14 94.2 13.5 100 54-184 184-295 (359)
199 1g6q_1 HnRNP arginine N-methyl 99.1 2.5E-10 8.6E-15 97.8 8.7 95 60-181 37-142 (328)
200 1fp1_D Isoliquiritigenin 2'-O- 99.1 2.7E-10 9.4E-15 99.0 9.0 103 52-184 200-306 (372)
201 2yxe_A Protein-L-isoaspartate 99.1 1.5E-10 5.1E-15 92.6 6.8 94 59-186 75-179 (215)
202 3kr9_A SAM-dependent methyltra 99.1 2.7E-10 9.3E-15 92.5 8.3 110 57-200 11-133 (225)
203 2pt6_A Spermidine synthase; tr 99.1 1.5E-10 5.3E-15 98.9 7.2 125 60-208 115-258 (321)
204 1qzz_A RDMB, aclacinomycin-10- 99.1 1.5E-09 5.2E-14 94.0 13.5 97 59-185 180-288 (374)
205 3i53_A O-methyltransferase; CO 99.1 9.3E-10 3.2E-14 94.0 11.9 119 60-208 168-320 (332)
206 1ws6_A Methyltransferase; stru 99.1 4.5E-11 1.6E-15 91.8 3.3 99 61-189 41-152 (171)
207 3reo_A (ISO)eugenol O-methyltr 99.1 5.7E-10 1.9E-14 97.0 10.6 96 59-184 201-300 (368)
208 2gpy_A O-methyltransferase; st 99.1 1.1E-10 3.8E-15 94.7 5.7 95 60-183 53-159 (233)
209 2avn_A Ubiquinone/menaquinone 99.1 7.2E-11 2.5E-15 97.5 4.3 96 60-186 53-154 (260)
210 3v97_A Ribosomal RNA large sub 99.1 1.2E-10 4.1E-15 109.2 6.2 109 60-186 538-659 (703)
211 1uir_A Polyamine aminopropyltr 99.1 1.7E-10 5.9E-15 98.3 6.6 127 60-208 76-224 (314)
212 2o07_A Spermidine synthase; st 99.1 2.5E-10 8.5E-15 96.9 7.4 124 60-207 94-236 (304)
213 2r3s_A Uncharacterized protein 99.1 1E-09 3.5E-14 93.6 11.3 98 60-185 164-272 (335)
214 2y1w_A Histone-arginine methyl 99.1 9E-11 3.1E-15 101.4 4.6 95 60-183 49-154 (348)
215 1xj5_A Spermidine synthase 1; 99.0 1.4E-10 4.9E-15 99.7 5.6 121 60-203 119-258 (334)
216 3gwz_A MMCR; methyltransferase 99.0 1E-09 3.5E-14 95.4 11.1 100 54-184 196-307 (369)
217 3c3y_A Pfomt, O-methyltransfer 99.0 1.3E-10 4.5E-15 95.0 5.0 96 60-183 69-180 (237)
218 3lst_A CALO1 methyltransferase 99.0 2.8E-10 9.4E-15 98.1 7.3 100 54-184 178-286 (348)
219 3fzg_A 16S rRNA methylase; met 99.0 7.5E-11 2.6E-15 93.1 3.4 94 59-182 47-150 (200)
220 3lec_A NADB-rossmann superfami 99.0 4.9E-10 1.7E-14 91.3 8.2 109 57-200 17-139 (230)
221 1r18_A Protein-L-isoaspartate( 99.0 5.4E-11 1.8E-15 96.3 2.2 98 59-186 82-196 (227)
222 3p9c_A Caffeic acid O-methyltr 99.0 9.9E-10 3.4E-14 95.4 10.3 96 59-184 199-298 (364)
223 2hnk_A SAM-dependent O-methylt 99.0 1.7E-10 6E-15 94.0 5.3 100 60-184 59-181 (239)
224 2qm3_A Predicted methyltransfe 99.0 2.7E-09 9.4E-14 92.9 13.0 109 61-198 172-296 (373)
225 3mcz_A O-methyltransferase; ad 99.0 6E-10 2E-14 95.9 8.5 108 51-184 169-287 (352)
226 1u2z_A Histone-lysine N-methyl 99.0 1.2E-09 4.3E-14 96.7 10.3 98 59-183 240-358 (433)
227 3bzb_A Uncharacterized protein 99.0 2E-09 7E-14 90.1 11.2 116 60-200 78-226 (281)
228 3gnl_A Uncharacterized protein 99.0 8.7E-10 3E-14 90.5 8.5 110 57-200 17-139 (244)
229 3c3p_A Methyltransferase; NP_9 99.0 6.6E-11 2.3E-15 94.6 1.6 93 60-183 55-159 (210)
230 3c0k_A UPF0064 protein YCCW; P 99.0 4.8E-10 1.7E-14 98.4 7.2 110 60-187 219-342 (396)
231 1fp2_A Isoflavone O-methyltran 99.0 8.2E-10 2.8E-14 95.2 8.4 95 59-184 186-288 (352)
232 2cmg_A Spermidine synthase; tr 99.0 3.1E-09 1E-13 88.3 11.5 126 60-225 71-215 (262)
233 3b3j_A Histone-arginine methyl 99.0 3.1E-10 1.1E-14 102.1 5.4 96 60-184 157-263 (480)
234 3gdh_A Trimethylguanosine synt 99.0 2E-11 6.8E-16 99.5 -2.4 91 61-183 78-180 (241)
235 3cbg_A O-methyltransferase; cy 99.0 2.4E-10 8.2E-15 93.0 4.0 96 60-183 71-181 (232)
236 1vbf_A 231AA long hypothetical 99.0 2.7E-10 9.4E-15 92.0 3.8 91 59-186 68-167 (231)
237 1jg1_A PIMT;, protein-L-isoasp 99.0 2.9E-10 9.8E-15 92.5 3.7 92 59-187 89-192 (235)
238 3htx_A HEN1; HEN1, small RNA m 99.0 4.6E-10 1.6E-14 105.5 5.6 98 60-184 720-834 (950)
239 2ip2_A Probable phenazine-spec 99.0 3.3E-09 1.1E-13 90.5 10.3 92 63-184 169-272 (334)
240 3giw_A Protein of unknown func 99.0 3.1E-09 1.1E-13 88.6 9.8 107 63-188 80-204 (277)
241 4e2x_A TCAB9; kijanose, tetron 99.0 3.6E-10 1.2E-14 99.5 4.4 124 59-208 105-252 (416)
242 3dp7_A SAM-dependent methyltra 99.0 1.5E-09 5.2E-14 94.0 8.3 99 60-184 178-287 (363)
243 2pbf_A Protein-L-isoaspartate 98.9 1.8E-10 6.3E-15 92.9 2.0 102 59-186 78-195 (227)
244 1ne2_A Hypothetical protein TA 98.9 1.7E-09 5.9E-14 85.5 7.4 106 60-200 50-161 (200)
245 1wy7_A Hypothetical protein PH 98.9 5.6E-09 1.9E-13 82.8 10.1 108 60-200 48-165 (207)
246 3tm4_A TRNA (guanine N2-)-meth 98.9 1.1E-09 3.6E-14 95.5 6.2 115 59-199 215-341 (373)
247 4a6d_A Hydroxyindole O-methylt 98.9 9.5E-09 3.2E-13 88.8 12.0 97 59-184 177-283 (353)
248 1vlm_A SAM-dependent methyltra 98.9 9.9E-10 3.4E-14 88.2 5.0 113 61-208 47-187 (219)
249 1tw3_A COMT, carminomycin 4-O- 98.9 3.4E-09 1.2E-13 91.4 8.5 98 59-185 181-289 (360)
250 2f8l_A Hypothetical protein LM 98.9 4.5E-09 1.5E-13 90.4 8.6 123 60-200 129-276 (344)
251 1af7_A Chemotaxis receptor met 98.9 1.6E-09 5.5E-14 90.6 5.3 100 61-183 105-251 (274)
252 1zg3_A Isoflavanone 4'-O-methy 98.9 3.6E-09 1.2E-13 91.4 7.3 96 59-184 191-293 (358)
253 2qfm_A Spermine synthase; sper 98.9 3.9E-09 1.4E-13 91.1 7.4 128 61-206 188-339 (364)
254 1yub_A Ermam, rRNA methyltrans 98.8 1.9E-09 6.6E-14 88.4 3.3 98 59-183 27-144 (245)
255 1zq9_A Probable dimethyladenos 98.8 8.6E-09 2.9E-13 86.6 6.1 66 59-146 26-103 (285)
256 2h1r_A Dimethyladenosine trans 98.8 1E-08 3.5E-13 86.7 6.5 66 59-146 40-116 (299)
257 2dul_A N(2),N(2)-dimethylguano 98.7 1.6E-08 5.4E-13 88.3 5.8 91 61-183 47-163 (378)
258 3axs_A Probable N(2),N(2)-dime 98.7 6.4E-09 2.2E-13 91.1 3.1 95 60-184 51-158 (392)
259 4azs_A Methyltransferase WBDD; 98.7 1.7E-08 6E-13 92.5 5.3 98 60-184 65-173 (569)
260 2jjq_A Uncharacterized RNA met 98.7 5.9E-08 2E-12 86.0 8.5 89 59-184 288-387 (425)
261 2okc_A Type I restriction enzy 98.6 4.6E-07 1.6E-11 80.6 12.8 129 59-197 169-325 (445)
262 3lcv_B Sisomicin-gentamicin re 98.6 7.9E-08 2.7E-12 79.3 7.1 104 48-182 115-234 (281)
263 3bt7_A TRNA (uracil-5-)-methyl 98.6 6.8E-08 2.3E-12 83.9 6.5 90 62-186 214-328 (369)
264 1qam_A ERMC' methyltransferase 98.6 9.8E-08 3.4E-12 78.2 7.0 67 59-146 28-104 (244)
265 3gru_A Dimethyladenosine trans 98.6 5.4E-08 1.9E-12 82.1 5.5 68 59-146 48-124 (295)
266 1m6y_A S-adenosyl-methyltransf 98.5 7.3E-08 2.5E-12 81.6 5.1 74 59-145 24-107 (301)
267 2ar0_A M.ecoki, type I restric 98.5 6.6E-07 2.3E-11 81.5 11.7 134 59-200 167-333 (541)
268 1uwv_A 23S rRNA (uracil-5-)-me 98.5 4.7E-07 1.6E-11 80.3 9.9 70 60-146 285-366 (433)
269 2r6z_A UPF0341 protein in RSP 98.5 9.6E-08 3.3E-12 79.1 4.4 70 59-146 81-171 (258)
270 3k0b_A Predicted N6-adenine-sp 98.4 6.9E-07 2.4E-11 78.3 9.5 108 60-184 200-350 (393)
271 3tqs_A Ribosomal RNA small sub 98.4 1E-07 3.6E-12 78.7 3.8 70 59-145 27-105 (255)
272 3ldu_A Putative methylase; str 98.4 5.3E-07 1.8E-11 78.8 7.9 108 60-184 194-344 (385)
273 3s1s_A Restriction endonucleas 98.4 2.4E-06 8.1E-11 80.4 11.5 135 60-208 320-495 (878)
274 3ldg_A Putative uncharacterize 98.3 2.9E-06 1E-10 74.1 10.5 108 60-184 193-343 (384)
275 4gqb_A Protein arginine N-meth 98.3 1E-07 3.5E-12 87.9 1.2 93 62-181 358-464 (637)
276 3trk_A Nonstructural polyprote 98.3 1.5E-06 5E-11 71.0 7.7 88 135-227 210-303 (324)
277 3fut_A Dimethyladenosine trans 98.3 4.5E-07 1.5E-11 75.6 4.7 68 59-147 45-121 (271)
278 3ll7_A Putative methyltransfer 98.3 1.4E-07 4.8E-12 82.9 1.6 117 59-197 91-222 (410)
279 3ua3_A Protein arginine N-meth 98.3 1.7E-07 5.9E-12 86.8 1.6 107 62-181 410-531 (745)
280 2oyr_A UPF0341 protein YHIQ; a 98.3 4.1E-07 1.4E-11 75.3 3.2 69 59-146 84-174 (258)
281 2k4m_A TR8_protein, UPF0146 pr 98.2 4.5E-06 1.5E-10 62.7 8.0 92 60-189 34-126 (153)
282 3lkd_A Type I restriction-modi 98.2 9.6E-06 3.3E-10 73.8 10.3 130 60-201 220-380 (542)
283 2qy6_A UPF0209 protein YFCK; s 98.1 2.2E-06 7.4E-11 70.9 5.3 115 61-202 60-228 (257)
284 3frh_A 16S rRNA methylase; met 98.1 6.9E-06 2.3E-10 67.1 8.2 90 60-182 104-204 (253)
285 3v97_A Ribosomal RNA large sub 98.1 4E-06 1.4E-10 78.6 7.4 112 60-184 189-347 (703)
286 3o4f_A Spermidine synthase; am 98.1 7.1E-06 2.4E-10 68.9 8.2 125 60-208 82-226 (294)
287 4gua_A Non-structural polyprot 98.0 1.5E-05 5.3E-10 71.3 9.0 89 134-227 219-313 (670)
288 3b5i_A S-adenosyl-L-methionine 98.0 4E-05 1.4E-09 66.6 11.3 118 62-187 53-228 (374)
289 2ld4_A Anamorsin; methyltransf 98.0 3.2E-06 1.1E-10 65.1 3.4 107 59-201 10-128 (176)
290 1qyr_A KSGA, high level kasuga 98.0 6.8E-06 2.3E-10 67.7 5.4 73 59-146 19-100 (252)
291 3khk_A Type I restriction-modi 97.9 1.2E-05 4.1E-10 73.3 6.5 129 63-201 246-418 (544)
292 3ftd_A Dimethyladenosine trans 97.9 8.7E-06 3E-10 66.9 4.4 70 59-146 29-105 (249)
293 3c6k_A Spermine synthase; sper 97.8 2.5E-05 8.5E-10 67.7 6.5 130 61-208 205-358 (381)
294 3cvo_A Methyltransferase-like 97.8 5.8E-05 2E-09 60.0 8.1 110 60-198 29-169 (202)
295 3uzu_A Ribosomal RNA small sub 97.8 1.3E-05 4.6E-10 66.9 4.2 74 59-145 40-123 (279)
296 1wg8_A Predicted S-adenosylmet 97.8 5E-05 1.7E-09 63.2 7.3 72 59-145 20-98 (285)
297 3ufb_A Type I restriction-modi 97.8 7.6E-05 2.6E-09 67.7 9.2 142 59-207 215-390 (530)
298 2efj_A 3,7-dimethylxanthine me 97.8 0.00013 4.4E-09 63.5 9.7 120 62-187 53-228 (384)
299 3tka_A Ribosomal RNA small sub 97.7 3.6E-05 1.2E-09 65.5 4.8 83 51-145 48-137 (347)
300 1m6e_X S-adenosyl-L-methionnin 97.7 9.3E-05 3.2E-09 63.9 7.2 117 61-186 51-211 (359)
301 2wk1_A NOVP; transferase, O-me 97.4 0.0002 6.7E-09 59.8 5.7 100 62-185 107-245 (282)
302 1pqw_A Polyketide synthase; ro 96.8 0.002 6.9E-08 50.1 5.9 95 59-183 36-136 (198)
303 2dph_A Formaldehyde dismutase; 96.8 0.0012 4.1E-08 57.4 5.0 106 59-183 183-298 (398)
304 1f8f_A Benzyl alcohol dehydrog 96.7 0.0014 4.9E-08 56.3 4.9 95 59-183 188-288 (371)
305 1pl8_A Human sorbitol dehydrog 96.7 0.0033 1.1E-07 53.7 7.0 96 59-184 169-273 (356)
306 3g7u_A Cytosine-specific methy 96.7 0.0041 1.4E-07 53.9 7.4 73 63-146 3-81 (376)
307 3m6i_A L-arabinitol 4-dehydrog 96.6 0.0097 3.3E-07 50.8 9.3 99 59-184 177-283 (363)
308 1e3j_A NADP(H)-dependent ketos 96.6 0.0039 1.3E-07 53.1 6.5 95 59-183 166-270 (352)
309 4eez_A Alcohol dehydrogenase 1 96.5 0.003 1E-07 53.6 5.5 97 59-184 161-263 (348)
310 3uko_A Alcohol dehydrogenase c 96.5 0.012 3.9E-07 50.7 9.3 96 59-184 191-295 (378)
311 1boo_A Protein (N-4 cytosine-s 96.5 0.0093 3.2E-07 50.5 8.1 70 110-186 14-86 (323)
312 1i4w_A Mitochondrial replicati 96.5 0.01 3.5E-07 51.0 8.3 53 61-123 58-118 (353)
313 3fpc_A NADP-dependent alcohol 96.4 0.0015 5.3E-08 55.7 3.2 96 59-183 164-265 (352)
314 3s2e_A Zinc-containing alcohol 96.4 0.0059 2E-07 51.7 6.4 93 59-183 164-262 (340)
315 2zig_A TTHA0409, putative modi 96.4 0.0017 5.9E-08 54.3 3.0 34 60-104 234-267 (297)
316 1kol_A Formaldehyde dehydrogen 96.3 0.0039 1.3E-07 54.1 5.2 106 59-183 183-299 (398)
317 3uog_A Alcohol dehydrogenase; 96.3 0.002 6.7E-08 55.3 2.8 94 59-183 187-286 (363)
318 1e3i_A Alcohol dehydrogenase, 96.2 0.01 3.5E-07 51.0 7.2 95 59-183 193-296 (376)
319 1p0f_A NADP-dependent alcohol 96.2 0.018 6.3E-07 49.3 8.8 95 59-183 189-292 (373)
320 3tos_A CALS11; methyltransfera 96.2 0.025 8.4E-07 46.4 9.1 122 62-201 70-234 (257)
321 3gms_A Putative NADPH:quinone 96.2 0.0077 2.6E-07 51.0 6.2 95 59-184 142-243 (340)
322 3jv7_A ADH-A; dehydrogenase, n 96.2 0.0058 2E-07 51.9 5.4 95 59-183 169-269 (345)
323 3jyn_A Quinone oxidoreductase; 96.2 0.0041 1.4E-07 52.4 4.4 96 59-184 138-239 (325)
324 2dq4_A L-threonine 3-dehydroge 96.2 0.012 4.3E-07 49.8 7.5 92 61-183 164-261 (343)
325 1g55_A DNA cytosine methyltran 96.2 0.013 4.4E-07 50.0 7.4 70 63-146 3-78 (343)
326 1cdo_A Alcohol dehydrogenase; 96.1 0.012 4.2E-07 50.5 7.2 95 59-183 190-293 (374)
327 3ip1_A Alcohol dehydrogenase, 96.1 0.017 5.7E-07 50.2 8.2 103 59-184 211-318 (404)
328 2fzw_A Alcohol dehydrogenase c 96.1 0.016 5.5E-07 49.6 7.9 95 59-183 188-291 (373)
329 1vj0_A Alcohol dehydrogenase, 96.1 0.0039 1.3E-07 53.9 3.9 97 59-184 193-298 (380)
330 4ej6_A Putative zinc-binding d 96.1 0.0043 1.5E-07 53.4 4.0 97 59-184 180-284 (370)
331 2zig_A TTHA0409, putative modi 96.0 0.0051 1.8E-07 51.3 4.3 69 110-185 21-98 (297)
332 3qwb_A Probable quinone oxidor 96.0 0.0051 1.8E-07 51.9 4.3 95 59-183 146-246 (334)
333 1g60_A Adenine-specific methyl 96.0 0.03 1E-06 45.7 8.7 65 112-184 6-74 (260)
334 1rjw_A ADH-HT, alcohol dehydro 96.0 0.012 4E-07 49.9 6.3 94 59-183 162-260 (339)
335 2jhf_A Alcohol dehydrogenase E 95.9 0.016 5.4E-07 49.7 7.1 95 59-183 189-292 (374)
336 3vyw_A MNMC2; tRNA wobble urid 95.9 0.02 6.9E-07 48.1 7.2 120 62-208 97-246 (308)
337 4e4y_A Short chain dehydrogena 95.9 0.15 5.3E-06 40.6 12.2 114 61-182 3-124 (244)
338 4b7c_A Probable oxidoreductase 95.8 0.012 4E-07 49.7 5.7 94 59-183 147-247 (336)
339 2d8a_A PH0655, probable L-thre 95.8 0.01 3.6E-07 50.4 5.4 95 61-183 167-266 (348)
340 1eg2_A Modification methylase 95.8 0.021 7.2E-07 48.2 7.2 80 130-210 52-144 (319)
341 4eye_A Probable oxidoreductase 95.8 0.01 3.4E-07 50.4 5.0 92 59-183 157-256 (342)
342 3iyl_W VP1; non-enveloped viru 95.8 0.21 7.2E-06 48.5 14.2 93 131-227 569-663 (1299)
343 4a2c_A Galactitol-1-phosphate 95.7 0.035 1.2E-06 46.8 8.1 98 59-185 158-261 (346)
344 1yb5_A Quinone oxidoreductase; 95.5 0.017 5.7E-07 49.3 5.5 95 59-183 168-268 (351)
345 2h6e_A ADH-4, D-arabinose 1-de 95.3 0.0053 1.8E-07 52.1 1.7 93 61-183 170-268 (344)
346 2eih_A Alcohol dehydrogenase; 95.3 0.018 6.3E-07 48.7 5.1 95 59-183 164-264 (343)
347 3iht_A S-adenosyl-L-methionine 95.3 0.091 3.1E-06 39.6 8.0 101 62-182 41-145 (174)
348 1qor_A Quinone oxidoreductase; 95.2 0.018 6E-07 48.4 4.4 95 59-183 138-238 (327)
349 4dvj_A Putative zinc-dependent 95.1 0.058 2E-06 46.1 7.7 93 61-183 171-269 (363)
350 2hcy_A Alcohol dehydrogenase 1 95.1 0.022 7.6E-07 48.3 4.8 95 59-183 167-268 (347)
351 4dup_A Quinone oxidoreductase; 95.0 0.019 6.4E-07 48.9 4.3 95 59-184 165-265 (353)
352 3slk_A Polyketide synthase ext 95.0 0.042 1.4E-06 52.1 6.9 94 59-183 343-441 (795)
353 2c0c_A Zinc binding alcohol de 95.0 0.026 8.8E-07 48.3 5.0 94 59-183 161-260 (362)
354 2j8z_A Quinone oxidoreductase; 94.8 0.015 5E-07 49.6 3.0 96 59-184 160-261 (354)
355 3gaz_A Alcohol dehydrogenase s 94.8 0.024 8E-07 48.1 4.3 92 59-183 148-245 (343)
356 2oo3_A Protein involved in cat 94.6 0.034 1.2E-06 46.1 4.6 111 62-198 92-214 (283)
357 1v3u_A Leukotriene B4 12- hydr 94.6 0.02 6.8E-07 48.2 3.3 94 59-183 143-243 (333)
358 1g60_A Adenine-specific methyl 94.6 0.02 6.7E-07 46.8 3.1 34 60-104 211-244 (260)
359 1dhr_A Dihydropteridine reduct 94.6 0.4 1.4E-05 38.0 10.9 113 61-182 6-131 (241)
360 1uuf_A YAHK, zinc-type alcohol 94.6 0.014 4.7E-07 50.2 2.3 90 59-183 192-287 (369)
361 2b5w_A Glucose dehydrogenase; 94.5 0.026 8.7E-07 48.1 3.7 94 59-184 164-273 (357)
362 2j3h_A NADP-dependent oxidored 94.4 0.048 1.6E-06 46.0 5.3 93 59-183 153-254 (345)
363 1jvb_A NAD(H)-dependent alcoho 94.4 0.038 1.3E-06 46.8 4.6 96 59-183 168-270 (347)
364 3fbg_A Putative arginate lyase 94.3 0.082 2.8E-06 44.7 6.5 90 61-182 150-246 (346)
365 3two_A Mannitol dehydrogenase; 94.3 0.031 1.1E-06 47.4 3.7 86 59-184 174-265 (348)
366 1ooe_A Dihydropteridine reduct 94.2 0.41 1.4E-05 37.8 10.2 76 62-146 3-82 (236)
367 3krt_A Crotonyl COA reductase; 94.2 0.02 6.8E-07 50.6 2.5 97 59-183 226-343 (456)
368 1wly_A CAAR, 2-haloacrylate re 94.1 0.057 2E-06 45.4 5.1 96 59-184 143-244 (333)
369 2zb4_A Prostaglandin reductase 94.1 0.046 1.6E-06 46.4 4.5 95 59-183 156-259 (357)
370 3qv2_A 5-cytosine DNA methyltr 94.0 0.14 4.9E-06 43.3 7.3 72 61-148 9-88 (327)
371 3gqv_A Enoyl reductase; medium 94.0 0.21 7.2E-06 42.6 8.5 91 60-183 163-262 (371)
372 2h7i_A Enoyl-[acyl-carrier-pro 93.8 0.4 1.4E-05 38.7 9.6 78 61-146 6-97 (269)
373 1iz0_A Quinone oxidoreductase; 93.6 0.043 1.5E-06 45.5 3.3 87 59-183 123-217 (302)
374 1piw_A Hypothetical zinc-type 93.5 0.039 1.3E-06 47.0 3.0 91 59-183 177-275 (360)
375 1ej6_A Lambda2; icosahedral, n 93.4 0.081 2.8E-06 51.0 5.1 93 131-227 565-659 (1289)
376 2py6_A Methyltransferase FKBM; 93.4 0.066 2.3E-06 46.7 4.3 38 59-104 224-262 (409)
377 3pi7_A NADH oxidoreductase; gr 93.3 0.11 3.6E-06 44.1 5.3 91 61-183 163-262 (349)
378 3oig_A Enoyl-[acyl-carrier-pro 93.2 2.1 7E-05 34.2 12.9 115 61-183 6-146 (266)
379 2pzm_A Putative nucleotide sug 93.2 1.8 6.1E-05 35.8 12.7 74 61-146 19-98 (330)
380 3goh_A Alcohol dehydrogenase, 93.1 0.065 2.2E-06 44.7 3.7 83 59-183 140-228 (315)
381 3ek2_A Enoyl-(acyl-carrier-pro 93.1 0.95 3.3E-05 36.2 10.6 116 60-183 12-152 (271)
382 4a0s_A Octenoyl-COA reductase/ 93.1 0.084 2.9E-06 46.3 4.5 96 59-183 218-335 (447)
383 3k31_A Enoyl-(acyl-carrier-pro 92.7 1.1 3.7E-05 36.8 10.6 115 61-183 29-167 (296)
384 1xa0_A Putative NADPH dependen 92.7 0.07 2.4E-06 44.7 3.3 91 59-183 146-245 (328)
385 1h2b_A Alcohol dehydrogenase; 92.6 0.14 4.8E-06 43.5 5.2 94 59-183 184-284 (359)
386 3d7l_A LIN1944 protein; APC893 92.5 1.3 4.4E-05 33.7 10.3 64 64-146 5-68 (202)
387 4h0n_A DNMT2; SAH binding, tra 92.4 0.095 3.2E-06 44.5 3.7 69 63-146 4-79 (333)
388 2pd4_A Enoyl-[acyl-carrier-pro 92.3 1.3 4.5E-05 35.7 10.5 78 61-146 5-94 (275)
389 1qsg_A Enoyl-[acyl-carrier-pro 92.2 1.1 3.9E-05 35.8 9.9 78 61-146 8-97 (265)
390 1wma_A Carbonyl reductase [NAD 92.1 0.59 2E-05 37.3 8.0 114 61-182 3-136 (276)
391 4egb_A DTDP-glucose 4,6-dehydr 92.0 1.7 5.7E-05 36.0 11.1 76 61-146 23-108 (346)
392 4id9_A Short-chain dehydrogena 92.0 1.5 5.1E-05 36.4 10.7 70 61-146 18-87 (347)
393 3enk_A UDP-glucose 4-epimerase 91.9 1.8 6.1E-05 35.7 11.2 74 61-146 4-88 (341)
394 1rpn_A GDP-mannose 4,6-dehydra 91.9 1.1 3.8E-05 36.9 9.8 75 60-146 12-96 (335)
395 3dqp_A Oxidoreductase YLBE; al 91.8 1.5 5.1E-05 33.8 10.0 69 64-146 2-73 (219)
396 3grk_A Enoyl-(acyl-carrier-pro 91.8 1.3 4.4E-05 36.3 10.0 115 61-183 30-168 (293)
397 3fwz_A Inner membrane protein 91.7 0.61 2.1E-05 33.8 7.1 96 63-186 8-107 (140)
398 1uay_A Type II 3-hydroxyacyl-C 91.6 1.6 5.6E-05 34.0 10.1 74 62-146 2-76 (242)
399 2cf5_A Atccad5, CAD, cinnamyl 91.6 0.024 8.2E-07 48.3 -0.9 90 59-183 177-274 (357)
400 2p91_A Enoyl-[acyl-carrier-pro 91.6 2.5 8.5E-05 34.2 11.5 78 61-146 20-109 (285)
401 3orf_A Dihydropteridine reduct 91.6 4.3 0.00015 32.1 12.9 110 62-182 22-142 (251)
402 1gu7_A Enoyl-[acyl-carrier-pro 91.5 0.29 9.8E-06 41.5 5.8 97 59-183 164-274 (364)
403 3ruf_A WBGU; rossmann fold, UD 91.4 0.89 3E-05 37.8 8.7 71 61-145 24-109 (351)
404 3rft_A Uronate dehydrogenase; 91.4 2.4 8.1E-05 33.9 11.1 70 63-146 4-74 (267)
405 2q1w_A Putative nucleotide sug 91.4 3.6 0.00012 33.9 12.5 74 61-146 20-99 (333)
406 2fwm_X 2,3-dihydro-2,3-dihydro 91.3 3.8 0.00013 32.4 12.1 77 61-146 6-84 (250)
407 3uce_A Dehydrogenase; rossmann 91.3 2.6 9E-05 32.7 11.0 102 61-183 5-115 (223)
408 3llv_A Exopolyphosphatase-rela 91.3 1.6 5.6E-05 31.2 9.1 69 62-144 6-78 (141)
409 3ijr_A Oxidoreductase, short c 91.2 4.1 0.00014 33.2 12.4 113 61-182 46-180 (291)
410 2qrv_A DNA (cytosine-5)-methyl 91.1 0.3 1E-05 40.7 5.3 73 60-146 14-93 (295)
411 2vn8_A Reticulon-4-interacting 91.0 0.22 7.5E-06 42.5 4.6 92 59-183 181-279 (375)
412 2g1u_A Hypothetical protein TM 90.9 3.5 0.00012 30.1 10.9 71 60-144 17-92 (155)
413 3vtz_A Glucose 1-dehydrogenase 90.9 2.9 0.0001 33.6 11.1 77 61-146 13-91 (269)
414 3un1_A Probable oxidoreductase 90.8 3.9 0.00013 32.7 11.8 77 61-146 27-106 (260)
415 2wyu_A Enoyl-[acyl carrier pro 90.7 1.4 4.8E-05 35.2 9.0 78 61-146 7-96 (261)
416 2dtx_A Glucose 1-dehydrogenase 90.6 5.5 0.00019 31.8 12.6 76 61-146 7-84 (264)
417 2z1m_A GDP-D-mannose dehydrata 90.6 4.7 0.00016 33.0 12.4 73 62-146 3-85 (345)
418 3is3_A 17BETA-hydroxysteroid d 90.4 2.1 7E-05 34.5 9.8 114 61-183 17-151 (270)
419 2cdc_A Glucose dehydrogenase g 90.3 0.12 3.9E-06 44.1 2.2 88 62-183 181-277 (366)
420 4a27_A Synaptic vesicle membra 89.9 0.14 4.7E-06 43.3 2.3 92 59-183 140-237 (349)
421 1yqd_A Sinapyl alcohol dehydro 89.6 0.23 8E-06 42.3 3.6 91 59-183 184-281 (366)
422 4eso_A Putative oxidoreductase 89.6 0.86 2.9E-05 36.5 6.8 113 61-182 7-136 (255)
423 1db3_A GDP-mannose 4,6-dehydra 89.4 5.9 0.0002 32.9 12.2 72 63-146 2-88 (372)
424 3uxy_A Short-chain dehydrogena 89.4 3 0.0001 33.6 10.0 76 61-146 27-104 (266)
425 3v2g_A 3-oxoacyl-[acyl-carrier 89.0 4.6 0.00016 32.5 10.9 114 61-183 30-164 (271)
426 1yo6_A Putative carbonyl reduc 89.0 4.7 0.00016 31.3 10.7 76 62-146 3-91 (250)
427 3e03_A Short chain dehydrogena 88.9 6.9 0.00024 31.4 11.9 77 61-146 5-100 (274)
428 3abi_A Putative uncharacterize 88.8 2.2 7.7E-05 36.1 9.2 70 61-146 15-87 (365)
429 3pxx_A Carveol dehydrogenase; 88.8 7.9 0.00027 31.0 12.2 113 61-182 9-151 (287)
430 1rjd_A PPM1P, carboxy methyl t 88.8 1.1 3.7E-05 37.9 7.0 102 61-182 97-230 (334)
431 1rkx_A CDP-glucose-4,6-dehydra 88.7 3 0.0001 34.6 9.8 72 62-145 9-89 (357)
432 1tt7_A YHFP; alcohol dehydroge 88.7 0.038 1.3E-06 46.3 -2.1 91 59-183 147-246 (330)
433 3sx2_A Putative 3-ketoacyl-(ac 88.6 5.1 0.00017 32.1 10.9 77 61-146 12-112 (278)
434 2vz8_A Fatty acid synthase; tr 88.6 0.54 1.8E-05 50.0 6.0 92 61-182 1240-1346(2512)
435 2hun_A 336AA long hypothetical 88.2 5.2 0.00018 32.7 10.9 73 62-146 3-85 (336)
436 3gem_A Short chain dehydrogena 88.1 3.4 0.00012 33.0 9.5 77 61-146 26-109 (260)
437 3r3s_A Oxidoreductase; structu 88.1 6.1 0.00021 32.1 11.2 113 61-182 48-183 (294)
438 4h15_A Short chain alcohol deh 87.9 8.5 0.00029 31.0 11.8 76 61-145 10-87 (261)
439 2pk3_A GDP-6-deoxy-D-LYXO-4-he 87.9 4.8 0.00016 32.7 10.4 76 59-146 9-84 (321)
440 4b79_A PA4098, probable short- 87.8 9.3 0.00032 30.6 12.3 75 61-146 10-88 (242)
441 3sxp_A ADP-L-glycero-D-mannohe 87.7 8 0.00027 32.1 11.9 75 61-146 9-100 (362)
442 2aef_A Calcium-gated potassium 87.7 7.6 0.00026 30.3 11.2 94 62-185 9-106 (234)
443 1xu9_A Corticosteroid 11-beta- 87.6 2.5 8.5E-05 34.2 8.4 74 61-143 27-113 (286)
444 2dkn_A 3-alpha-hydroxysteroid 87.5 2.2 7.4E-05 33.4 7.9 70 64-146 3-72 (255)
445 3tqh_A Quinone oxidoreductase; 87.5 0.21 7.1E-06 41.7 1.7 89 59-183 150-244 (321)
446 3p19_A BFPVVD8, putative blue 87.3 7.6 0.00026 31.1 11.1 76 62-146 16-97 (266)
447 3sc4_A Short chain dehydrogena 86.9 11 0.00037 30.4 12.7 77 61-146 8-103 (285)
448 1uzm_A 3-oxoacyl-[acyl-carrier 86.9 9.8 0.00034 29.9 11.8 76 61-146 14-91 (247)
449 3l9w_A Glutathione-regulated p 86.9 2.3 7.7E-05 37.0 8.1 97 62-186 4-104 (413)
450 2c7p_A Modification methylase 86.8 0.45 1.6E-05 40.1 3.5 66 62-147 11-82 (327)
451 1ek6_A UDP-galactose 4-epimera 86.7 4.3 0.00015 33.5 9.6 72 63-146 3-91 (348)
452 2c5a_A GDP-mannose-3', 5'-epim 86.6 9.3 0.00032 32.0 11.8 72 61-146 28-103 (379)
453 1sb8_A WBPP; epimerase, 4-epim 86.6 3.8 0.00013 34.0 9.2 71 62-146 27-112 (352)
454 3c85_A Putative glutathione-re 86.5 2.7 9.4E-05 31.5 7.6 95 62-184 39-139 (183)
455 2gdz_A NAD+-dependent 15-hydro 86.5 2.8 9.6E-05 33.4 8.0 77 61-146 6-96 (267)
456 1sny_A Sniffer CG10964-PA; alp 86.4 5.1 0.00017 31.7 9.5 77 61-146 20-112 (267)
457 1gy8_A UDP-galactose 4-epimera 86.3 8.1 0.00028 32.4 11.3 74 62-146 2-103 (397)
458 3ehe_A UDP-glucose 4-epimerase 86.3 5.8 0.0002 32.2 10.0 67 64-146 3-73 (313)
459 3me5_A Cytosine-specific methy 86.3 1.2 4.1E-05 39.7 6.1 72 62-146 88-179 (482)
460 3kvo_A Hydroxysteroid dehydrog 86.3 14 0.00046 31.0 12.5 77 61-146 44-139 (346)
461 1yb1_A 17-beta-hydroxysteroid 86.2 5.7 0.00019 31.8 9.8 77 61-146 30-118 (272)
462 3dii_A Short-chain dehydrogena 86.1 4.6 0.00016 31.8 9.1 76 62-146 2-85 (247)
463 3nrc_A Enoyl-[acyl-carrier-pro 86.0 11 0.00036 30.3 11.4 78 61-146 25-113 (280)
464 1id1_A Putative potassium chan 86.0 7.9 0.00027 28.0 10.4 97 62-186 3-107 (153)
465 3pvc_A TRNA 5-methylaminomethy 86.0 0.94 3.2E-05 42.0 5.5 45 61-105 58-105 (689)
466 3m2p_A UDP-N-acetylglucosamine 85.9 12 0.00042 30.2 11.9 69 63-146 3-72 (311)
467 3l4b_C TRKA K+ channel protien 85.9 5 0.00017 31.0 9.0 94 64-185 2-100 (218)
468 1g0o_A Trihydroxynaphthalene r 85.7 7.9 0.00027 31.1 10.5 113 61-182 28-161 (283)
469 1sby_A Alcohol dehydrogenase; 85.7 4.4 0.00015 32.0 8.8 77 61-146 4-94 (254)
470 3r1i_A Short-chain type dehydr 85.6 4.9 0.00017 32.4 9.2 77 61-146 31-119 (276)
471 3ioy_A Short-chain dehydrogena 85.6 2.8 9.5E-05 34.7 7.8 77 61-146 7-97 (319)
472 3ksu_A 3-oxoacyl-acyl carrier 85.5 5.6 0.00019 31.7 9.4 113 61-182 10-145 (262)
473 1ja9_A 4HNR, 1,3,6,8-tetrahydr 85.4 3.8 0.00013 32.5 8.3 77 61-146 20-109 (274)
474 3gpi_A NAD-dependent epimerase 85.3 1.3 4.6E-05 35.6 5.6 70 62-145 3-72 (286)
475 1cyd_A Carbonyl reductase; sho 85.2 10 0.00036 29.3 10.8 75 61-146 6-86 (244)
476 1fmc_A 7 alpha-hydroxysteroid 85.0 8.2 0.00028 30.1 10.1 77 61-146 10-98 (255)
477 1t2a_A GDP-mannose 4,6 dehydra 85.0 6.1 0.00021 33.0 9.8 72 63-146 25-112 (375)
478 3tzq_B Short-chain type dehydr 85.0 13 0.00045 29.6 12.2 77 61-146 10-95 (271)
479 4fs3_A Enoyl-[acyl-carrier-pro 84.9 13 0.00044 29.5 12.4 77 61-145 5-95 (256)
480 3tjr_A Short chain dehydrogena 84.8 5.3 0.00018 32.6 9.1 77 61-146 30-118 (301)
481 2o23_A HADH2 protein; HSD17B10 84.8 8.4 0.00029 30.3 10.1 77 61-146 11-96 (265)
482 3nx4_A Putative oxidoreductase 84.7 0.41 1.4E-05 39.7 2.2 84 64-183 149-240 (324)
483 2nm0_A Probable 3-oxacyl-(acyl 84.7 13 0.00045 29.4 11.9 75 62-146 21-97 (253)
484 3nzo_A UDP-N-acetylglucosamine 84.6 5.3 0.00018 34.2 9.3 75 61-146 34-122 (399)
485 1yde_A Retinal dehydrogenase/r 84.5 6.2 0.00021 31.6 9.2 77 61-146 8-92 (270)
486 3nyw_A Putative oxidoreductase 84.5 8.7 0.0003 30.3 10.0 77 61-146 6-97 (250)
487 2c20_A UDP-glucose 4-epimerase 84.3 8.4 0.00029 31.3 10.2 71 64-146 3-77 (330)
488 4e6p_A Probable sorbitol dehyd 84.3 4.6 0.00016 32.0 8.3 77 61-146 7-92 (259)
489 1n7h_A GDP-D-mannose-4,6-dehyd 84.2 4.7 0.00016 33.8 8.7 72 63-146 29-116 (381)
490 3f1l_A Uncharacterized oxidore 84.2 10 0.00036 29.8 10.4 77 61-146 11-102 (252)
491 3tpc_A Short chain alcohol deh 84.2 14 0.00047 29.1 12.7 77 61-146 6-91 (257)
492 2q1s_A Putative nucleotide sug 83.8 5.6 0.00019 33.4 9.0 72 61-146 31-109 (377)
493 3gdg_A Probable NADP-dependent 83.6 8.9 0.0003 30.3 9.8 78 61-146 19-111 (267)
494 1h5q_A NADP-dependent mannitol 83.2 12 0.0004 29.4 10.4 77 61-146 13-102 (265)
495 3h7a_A Short chain dehydrogena 83.2 10 0.00035 29.9 10.0 77 61-146 6-93 (252)
496 4imr_A 3-oxoacyl-(acyl-carrier 83.1 13 0.00046 29.7 10.7 77 61-146 32-119 (275)
497 3e9n_A Putative short-chain de 82.9 2.2 7.4E-05 33.7 5.7 75 62-146 5-85 (245)
498 1jtv_A 17 beta-hydroxysteroid 82.8 10 0.00034 31.4 10.1 76 62-146 2-93 (327)
499 3o38_A Short chain dehydrogena 82.8 16 0.00054 28.8 11.0 77 61-146 21-111 (266)
500 2bgk_A Rhizome secoisolaricire 82.6 8.7 0.0003 30.5 9.4 77 61-146 15-102 (278)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=100.00 E-value=1e-41 Score=272.95 Aligned_cols=179 Identities=31% Similarity=0.522 Sum_probs=157.5
Q ss_pred hcCccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecC
Q psy1489 38 KENYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKC 117 (229)
Q Consensus 38 ~~~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~ 117 (229)
.++|++|++|||.++++++.+++++.+|||||||||+|+++++++ + ++|+|+|++++.+++++.++ ++
T Consensus 2 ~~~yr~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~----------~~V~gvD~~~~~~~~~v~~~-~~ 69 (191)
T 3dou_A 2 SLQLRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-A----------RKIISIDLQEMEEIAGVRFI-RC 69 (191)
T ss_dssp --CTTSHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-C----------SEEEEEESSCCCCCTTCEEE-EC
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-C----------CcEEEEeccccccCCCeEEE-Ec
Confidence 468999999999999999999999999999999999999999876 3 69999999998888899999 99
Q ss_pred CCCChhHHHHHHHHhC---CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHH
Q psy1489 118 DFTQPDIQDRLVTILK---DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLE 194 (229)
Q Consensus 118 D~~~~~~~~~i~~~~~---~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~ 194 (229)
|+++......+...+. .++||+|+||++|+.+|.+..++...+.++..++..+.++|||||+|++++|.+.....+.
T Consensus 70 D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~ 149 (191)
T 3dou_A 70 DIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFI 149 (191)
T ss_dssp CTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHH
T ss_pred cccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHH
Confidence 9999877666665554 1389999999999999998888888888999999999999999999999999999888999
Q ss_pred HHHHhhCCeeEEEcCCCCCCCCceEEEEeccCCC
Q psy1489 195 ESITRFYSQVKILKPPSSRSHSAELFLLGRGFKG 228 (229)
Q Consensus 195 ~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~~~ 228 (229)
..++.+|..|+++||.+||++|+|+|+||+|||+
T Consensus 150 ~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~~~ 183 (191)
T 3dou_A 150 AIWRKNFSSYKISKPPASRGSSSEIYIMFFGFKA 183 (191)
T ss_dssp HHHGGGEEEEEEECC------CCEEEEEEEEECC
T ss_pred HHHHHhcCEEEEECCCCccCCCceEEEEEeeecc
Confidence 9999999999999999999999999999999995
No 2
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=100.00 E-value=2.4e-37 Score=252.65 Aligned_cols=162 Identities=20% Similarity=0.275 Sum_probs=136.9
Q ss_pred cCccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHH--HhccCCCCCCC-CcEEEEEe--CCCCCCC-CCC-
Q psy1489 39 ENYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKL--VNSHGYDSKQP-KGLVLSVD--KLPIYPI-DGA- 111 (229)
Q Consensus 39 ~~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~--~~~~~~~~~~~-~~~v~gvD--~~~~~~~-~~~- 111 (229)
.+|++|++|||.||++++ ++++|++||||||+||+|+++++++ ++ . .|.++|+| +.||.++ +++
T Consensus 52 g~yRSRAayKL~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg--------~V~G~vig~D~~~~P~~~~~~Gv~ 122 (269)
T 2px2_A 52 GHPVSRGTAKLRWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQ--------EVRGYTKGGPGHEEPMLMQSYGWN 122 (269)
T ss_dssp SCCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEE--------EEEEECCCSTTSCCCCCCCSTTGG
T ss_pred CCcccHHHHHHHHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCC--------CceeEEEccccccCCCcccCCCce
Confidence 379999999999999998 9999999999999999999999987 43 2 36788999 5555554 566
Q ss_pred --eEEecC-CCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCC-EEEEeecCC
Q psy1489 112 --VVLSKC-DFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGA-DCLIKIWDG 187 (229)
Q Consensus 112 --~~~~~~-D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG-~~v~~~~~~ 187 (229)
.++ ++ |+++ +++.++|+|+|||+|+ +|.+..|+...+. +|..|.++|+||| .|++|+|++
T Consensus 123 ~i~~~-~G~Df~~----------~~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 123 IVTMK-SGVDVFY----------KPSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp GEEEE-CSCCGGG----------SCCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEESCT
T ss_pred EEEee-ccCCccC----------CCCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEECCC
Confidence 444 47 9886 4466899999999998 9999999887766 8899999999999 999999996
Q ss_pred --CChHHHHHHHHhhCCeeEEEcCCCCCCCCceEEEEeccC
Q psy1489 188 --RNRPQLEESITRFYSQVKILKPPSSRSHSAELFLLGRGF 226 (229)
Q Consensus 188 --~~~~~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~ 226 (229)
+++.++++.++..|..|.+ ||++||++|+|+|+||+..
T Consensus 187 ~~~~~~~~l~~lk~~F~~vkv-k~paSR~~S~E~YlVa~~~ 226 (269)
T 2px2_A 187 YMPKVIEKLESLQRRFGGGLV-RVPLSRNSNHEMYWVSGAS 226 (269)
T ss_dssp TSHHHHHHHHHHHHHHCCEEE-CCTTSCTTCCCEEEETTCC
T ss_pred CchHHHHHHHHHHHHcCCEEE-ECCCCCCCCccEEEEeccc
Confidence 4456667799999999996 5669999999999999754
No 3
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=100.00 E-value=2.5e-35 Score=244.50 Aligned_cols=163 Identities=17% Similarity=0.145 Sum_probs=137.4
Q ss_pred cCccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC---CCCCC------
Q psy1489 39 ENYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP---IYPID------ 109 (229)
Q Consensus 39 ~~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~---~~~~~------ 109 (229)
..|++|++|||++|++++ +++++.+|||||||||+|+++++++. +...|+|+|+.. +.+++
T Consensus 69 g~YrSRAAfKL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~---------gv~sV~GvdvG~d~~~~pi~~~~~g~ 138 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLK---------NVKKVMAFTLGVQGHEKPIMRTTLGW 138 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTST---------TEEEEEEECCCCTTSCCCCCCCBTTG
T ss_pred CCEecHHHHHHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhc---------CCCeeeeEEeccCccccccccccCCC
Confidence 468999999999999998 78899999999999999999998765 345789999974 23332
Q ss_pred CCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC--CEEEEeecC-
Q psy1489 110 GAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG--ADCLIKIWD- 186 (229)
Q Consensus 110 ~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg--G~~v~~~~~- 186 (229)
++..+ ..++.. ..++..++|+|+|||+|+ +|.+..|++..+.+ |..|.++|+|| |.|++|+|+
T Consensus 139 ~ii~~-~~~~dv--------~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 139 NLIRF-KDKTDV--------FNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp GGEEE-ECSCCG--------GGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEEESCC
T ss_pred ceEEe-eCCcch--------hhcCCCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEEEecC
Confidence 22233 322221 125678999999999999 99999999887765 88899999999 999999999
Q ss_pred -CCChHHHHHHHHhhCCeeEEEcCCCCCCCCceEEEEeccC
Q psy1489 187 -GRNRPQLEESITRFYSQVKILKPPSSRSHSAELFLLGRGF 226 (229)
Q Consensus 187 -~~~~~~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~ 226 (229)
+.+..++++.|+++|..|.++|| +||++|+|+|+||++.
T Consensus 205 yg~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r 244 (282)
T 3gcz_A 205 YTPLIMEELSRLQLKHGGGLVRVP-LSRNSTHEMYWVSGTR 244 (282)
T ss_dssp CSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCC
T ss_pred CCccHHHHHHHHHHhcCCEEEEcC-CCcccCcceeEEEecC
Confidence 88899999999999999999999 9999999999999875
No 4
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=100.00 E-value=7.4e-35 Score=241.43 Aligned_cols=162 Identities=16% Similarity=0.194 Sum_probs=136.5
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCC---CCCCCC------C
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKL---PIYPID------G 110 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~---~~~~~~------~ 110 (229)
+|++|++|||++++++ .+++++.+|||||||||+|+++++++. +...|+|+|+. ++.+++ +
T Consensus 54 ~YrSRaA~KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~---------~~~~v~g~dVGvDl~~~pi~~~~~g~~ 123 (277)
T 3evf_A 54 VAVSRGTAKLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQK---------EVSGVKGFTLGRDGHEKPMNVQSLGWN 123 (277)
T ss_dssp BCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTST---------TEEEEEEECCCCTTCCCCCCCCBTTGG
T ss_pred CccccHHHHHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhc---------CCCcceeEEEeccCcccccccCcCCCC
Confidence 5999999999999999 678899999999999999999988764 23466677666 233333 3
Q ss_pred CeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEeecC--C
Q psy1489 111 AVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIKIWD--G 187 (229)
Q Consensus 111 ~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~~~~--~ 187 (229)
+..+ ++++... .+++.+||+|+||++|+ +|.+..|+...+.+ |..|.++|+|| |.|++|+|+ +
T Consensus 124 ii~~-~~~~dv~--------~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf~pyg 189 (277)
T 3evf_A 124 IITF-KDKTDIH--------RLEPVKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVLAPYM 189 (277)
T ss_dssp GEEE-ECSCCTT--------TSCCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEESCTTS
T ss_pred eEEE-eccceeh--------hcCCCCccEEEecCccC-cCchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEecCCCC
Confidence 4445 5554321 25678899999999999 99999888877665 88899999999 999999999 8
Q ss_pred CChHHHHHHHHhhCCeeEEEcCCCCCCCCceEEEEeccC
Q psy1489 188 RNRPQLEESITRFYSQVKILKPPSSRSHSAELFLLGRGF 226 (229)
Q Consensus 188 ~~~~~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~ 226 (229)
.+..++++.++++|..|.++|| +||++|+|+|+||++.
T Consensus 190 ~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r 227 (277)
T 3evf_A 190 PDVLEKLELLQRRFGGTVIRNP-LSRNSTHEMYYVSGAR 227 (277)
T ss_dssp HHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCC
T ss_pred ccHHHHHHHHHHhcCCEEEEeC-CCCCCCCceEEEEecC
Confidence 8899999999999999999999 9999999999999875
No 5
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=100.00 E-value=1.8e-33 Score=225.15 Aligned_cols=181 Identities=31% Similarity=0.570 Sum_probs=151.3
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCC-CcEEEEEeCCCCCCCCCCeEEecCC
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQP-KGLVLSVDKLPIYPIDGAVVLSKCD 118 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~-~~~v~gvD~~~~~~~~~~~~~~~~D 118 (229)
+|++|+++||.++++++.+++++.+|||||||||.++..++++.+ + .++|+|+|++++...+++.++ ++|
T Consensus 1 ~~~~r~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~--------~~~~~v~gvD~s~~~~~~~v~~~-~~d 71 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTK--------NYKNKIIGIDKKIMDPIPNVYFI-QGE 71 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTT--------TSCEEEEEEESSCCCCCTTCEEE-ECC
T ss_pred CcchHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcC--------CCCceEEEEeCCccCCCCCceEE-Ecc
Confidence 589999999999999999889999999999999999999999863 2 579999999998777889999 999
Q ss_pred CCChh-----------------HHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEE
Q psy1489 119 FTQPD-----------------IQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCL 181 (229)
Q Consensus 119 ~~~~~-----------------~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v 181 (229)
+.+.. ....+...+++.+||+|++++++...|.+..++....++...++..+.++|+|||.|+
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv 151 (201)
T 2plw_A 72 IGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYI 151 (201)
T ss_dssp TTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 98754 3333444466779999999998776666666666666677789999999999999999
Q ss_pred EeecCCCChHHHHHHHHhhCCeeEEEcCCCCCCCCceEEEEeccCCCC
Q psy1489 182 IKIWDGRNRPQLEESITRFYSQVKILKPPSSRSHSAELFLLGRGFKGK 229 (229)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~~~~ 229 (229)
++++......++...++..|..+.+++|.++|..++|.|+||++|+|.
T Consensus 152 ~~~~~~~~~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~~~~~ 199 (201)
T 2plw_A 152 VKMYLGSQTNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKNFLGR 199 (201)
T ss_dssp EEEECSTTHHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEEECCC
T ss_pred EEEeCCCCHHHHHHHHHHHHheEEEECCcccCCcCceEEEEEecCccC
Confidence 999988888889999999999999999999999999999999999974
No 6
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=100.00 E-value=1.7e-33 Score=234.79 Aligned_cols=161 Identities=17% Similarity=0.190 Sum_probs=137.1
Q ss_pred cCccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---CCCC------
Q psy1489 39 ENYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---YPID------ 109 (229)
Q Consensus 39 ~~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---~~~~------ 109 (229)
.+|++|++|||.+++++ .+++++.+||||||+||+|+++++++. +...|+|+|+... .+..
T Consensus 60 g~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~---------gv~sV~Gvdlg~~~~~~P~~~~~~~~ 129 (300)
T 3eld_A 60 GISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQK---------EVMSVKGYTLGIEGHEKPIHMQTLGW 129 (300)
T ss_dssp CCCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTST---------TEEEEEEECCCCTTSCCCCCCCBTTG
T ss_pred CCccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhc---------CCceeeeEEeccccccccccccccCC
Confidence 37999999999999999 999999999999999999999999865 3457899999741 2221
Q ss_pred CCeEEecC--CCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEeecC
Q psy1489 110 GAVVLSKC--DFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIKIWD 186 (229)
Q Consensus 110 ~~~~~~~~--D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~~~~ 186 (229)
++... .. |+.. +.+..+|+|+||++|+ +|.+..|++..+.+ |..|.++|+|| |.|++|+|+
T Consensus 130 ~iv~~-~~~~di~~----------l~~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 130 NIVKF-KDKSNVFT----------MPTEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp GGEEE-ECSCCTTT----------SCCCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEEESS
T ss_pred ceEEe-ecCceeee----------cCCCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEEecc
Confidence 12222 22 3222 4567899999999999 99999999877766 88899999999 999999999
Q ss_pred --CCChHHHHHHHHhhCCeeEEEcCCCCCCCCceEEEEeccC
Q psy1489 187 --GRNRPQLEESITRFYSQVKILKPPSSRSHSAELFLLGRGF 226 (229)
Q Consensus 187 --~~~~~~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~ 226 (229)
+++..++++.|+++|..|.++|| +||++|+|+|+||.++
T Consensus 194 ~yG~~~~~ll~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r 234 (300)
T 3eld_A 194 PYHPDVIEKLERLQLRFGGGIVRVP-FSRNSTHEMYYISGAR 234 (300)
T ss_dssp TTSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCC
T ss_pred ccCccHHHHHHHHHHhCCcEEEEeC-CCCCCChHHeeeccCC
Confidence 88899999999999999999999 9999999999999885
No 7
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.98 E-value=1.5e-31 Score=212.96 Aligned_cols=190 Identities=45% Similarity=0.854 Sum_probs=149.2
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCC
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDF 119 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~ 119 (229)
+|++|+++++.+++.++.+++++.+|||+|||||.++..++++.+..+.....+.++|+|+|++++..++++.++..+|+
T Consensus 1 ~~~~r~~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~ 80 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADV 80 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCT
T ss_pred CchhHHHHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccC
Confidence 58999999999999999989999999999999999999999986410000001127999999999766677766436788
Q ss_pred CChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHh
Q psy1489 120 TQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITR 199 (229)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~ 199 (229)
.+......+...+++++||+|+++++++..+.+..++.....+...++.++.++|+|||.|++.++......++.+.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 160 (196)
T 2nyu_A 81 TDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTE 160 (196)
T ss_dssp TSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHH
Confidence 87665555555566678999999998887777766666666677789999999999999999999988777888898988
Q ss_pred hCCeeEEEcCCCCCCCCceEEEEeccCCCC
Q psy1489 200 FYSQVKILKPPSSRSHSAELFLLGRGFKGK 229 (229)
Q Consensus 200 ~F~~v~~~kp~~sr~~s~E~Y~v~~~~~~~ 229 (229)
.|..+.+++|.++|..+.|.|+||.||+++
T Consensus 161 ~f~~v~~~~~~~~~~~~~e~~~v~~g~~~~ 190 (196)
T 2nyu_A 161 EFQNVRIIKPEASRKESSEVYFLATQYHGR 190 (196)
T ss_dssp HEEEEEEECCC--------EEEEEEEECCC
T ss_pred HhcceEEECCcccCccCceEEEEeeecCCc
Confidence 999999999999999999999999999864
No 8
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.96 E-value=3e-29 Score=201.80 Aligned_cols=158 Identities=18% Similarity=0.205 Sum_probs=133.1
Q ss_pred cCccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC----------
Q psy1489 39 ENYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI---------- 108 (229)
Q Consensus 39 ~~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~---------- 108 (229)
.+|+||++|||.++++++ +++++++||||||+||+|+++++...+ ..+|+|+|+..+...
T Consensus 57 g~yrSRa~~KL~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g---------~~~V~avdvG~~ghe~P~~~~s~gw 126 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKK---------VTEVRGYTKGGPGHEEPVPMSTYGW 126 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTT---------EEEEEEECCCSTTSCCCCCCCCTTT
T ss_pred CCccchHHHHHHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcC---------CCEEEEEecCCCCccCcchhhhcCc
Confidence 379999999999999999 678999999999999999999888764 358999999874322
Q ss_pred CCCeEEecC-CCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC
Q psy1489 109 DGAVVLSKC-DFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 109 ~~~~~~~~~-D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
+.+++. ++ |+.. ++..++|.|+||+.+ .++.+..|+.+.+ .+|+.+.++|++ |.|++|+|++
T Consensus 127 n~v~fk-~gvDv~~----------~~~~~~DtllcDIge-Ss~~~~vE~~Rtl----rvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 127 NIVKLM-SGKDVFY----------LPPEKCDTLLCDIGE-SSPSPTVEESRTI----RVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp TSEEEE-CSCCGGG----------CCCCCCSEEEECCCC-CCSCHHHHHHHHH----HHHHHHGGGCSS-CEEEEEESCC
T ss_pred CceEEE-eccceee----------cCCccccEEEEecCC-CCCChhhhhhHHH----HHHHHHHHhccc-CCEEEEEccC
Confidence 467888 76 8643 445789999999998 5666666655443 488999999999 8999999998
Q ss_pred CC--hHHHHHHHHhhCCeeEEEcCCCCCCCCceEEEEec
Q psy1489 188 RN--RPQLEESITRFYSQVKILKPPSSRSHSAELFLLGR 224 (229)
Q Consensus 188 ~~--~~~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~ 224 (229)
.. ..+.++.++..|..+.+++|. ||++++|||+|.-
T Consensus 190 y~p~v~e~l~~lq~~fgg~lVR~P~-SRnsThEMY~Vsg 227 (267)
T 3p8z_A 190 YMPTVIEHLERLQRKHGGMLVRNPL-SRNSTHEMYWISN 227 (267)
T ss_dssp CSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEESS
T ss_pred CChhHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEec
Confidence 87 677888899999999999998 9999999999964
No 9
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.95 E-value=3.9e-27 Score=183.03 Aligned_cols=179 Identities=35% Similarity=0.583 Sum_probs=153.7
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCC
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDF 119 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~ 119 (229)
+|++|+.+++.++...+..+.++.+|||+|||+|.++..+++..+ +..+++|+|++++...+++.++ .+|+
T Consensus 1 ~y~~r~~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~--------~~~~v~~~D~~~~~~~~~~~~~-~~d~ 71 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIG--------GKGRIIACDLLPMDPIVGVDFL-QGDF 71 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHC--------TTCEEEEEESSCCCCCTTEEEE-ESCT
T ss_pred CcchhHHHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhC--------CCCeEEEEECccccccCcEEEE-Eccc
Confidence 578999999999999988788899999999999999999998864 4579999999997667888898 9999
Q ss_pred CChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHh
Q psy1489 120 TQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITR 199 (229)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~ 199 (229)
.+......+...+++++||+|+++.+....+....++.........++..+.++|+|||.+++..+.......+...++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~ 151 (180)
T 1ej0_A 72 RDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS 151 (180)
T ss_dssp TSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH
T ss_pred ccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH
Confidence 98765555555566789999999988766565555555555556788999999999999999988888888889999999
Q ss_pred hCCeeEEEcCCCCCCCCceEEEEeccCC
Q psy1489 200 FYSQVKILKPPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 200 ~F~~v~~~kp~~sr~~s~E~Y~v~~~~~ 227 (229)
.|..+.+.+|..+|..+.|.|+||++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (180)
T 1ej0_A 152 LFTKVKVRKPDSSRARSREVYIVATGRK 179 (180)
T ss_dssp HEEEEEEECCTTSCTTCCEEEEEEEEEC
T ss_pred hhhhEEeecCCcccccCceEEEEEccCC
Confidence 9999999999999999999999999997
No 10
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.95 E-value=1.1e-27 Score=200.60 Aligned_cols=158 Identities=18% Similarity=0.294 Sum_probs=127.0
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CCCC----
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YPID---- 109 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~~~---- 109 (229)
.|++|+++||.+++++ .+++++.+|||||||||+|+++++++ ++|+|||+++| .+.+
T Consensus 54 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~------------~~V~gvD~s~m~~~a~~~~~~~~~~ 120 (265)
T 2oxt_A 54 LSVSRGTAKLAWMEER-GYVELTGRVVDLGCGRGGWSYYAASR------------PHVMDVRAYTLGVGGHEVPRITESY 120 (265)
T ss_dssp BCSSTHHHHHHHHHHH-TSCCCCEEEEEESCTTSHHHHHHHTS------------TTEEEEEEECCCCSSCCCCCCCCBT
T ss_pred CccchHHHHHHHHHHc-CCCCCCCEEEEeCcCCCHHHHHHHHc------------CcEEEEECchhhhhhhhhhhhhhcc
Confidence 4899999999999888 66789999999999999999998875 38999999997 2333
Q ss_pred --CCeEE-ecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCC--EEEEee
Q psy1489 110 --GAVVL-SKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGA--DCLIKI 184 (229)
Q Consensus 110 --~~~~~-~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG--~~v~~~ 184 (229)
++.++ +++|+++ +++++||+|+||++ +..+.+..++... ..+|..+.++|+||| .|++++
T Consensus 121 ~~~v~~~~~~~D~~~----------l~~~~fD~V~sd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 121 GWNIVKFKSRVDIHT----------LPVERTDVIMCDVG-ESSPKWSVESERT----IKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp TGGGEEEECSCCTTT----------SCCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCeEEEecccCHhH----------CCCCCCcEEEEeCc-ccCCccchhHHHH----HHHHHHHHHHhccCCCeEEEEEe
Confidence 45543 2567766 45678999999987 5555544444322 137888999999999 999999
Q ss_pred cCCCChH---HHHHHHHhhCCeeEEEcCCCCCCCCceEEEEeccCC
Q psy1489 185 WDGRNRP---QLEESITRFYSQVKILKPPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 185 ~~~~~~~---~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~~ 227 (229)
|. +... +++..++..|..+.+.| .+||+.|+|+|+||.++.
T Consensus 186 ~~-~~~~~~~~~l~~l~~~f~~v~~~k-~~sR~~s~E~y~v~~~~~ 229 (265)
T 2oxt_A 186 LC-PYSVEVMERLSVMQRKWGGGLVRN-PYSRNSTHEMYFTSRAGG 229 (265)
T ss_dssp SC-TTSHHHHHHHHHHHHHHCCEEECC-TTSCTTCCCEEEESSCCS
T ss_pred CC-CCChhHHHHHHHHHHHcCCEEEEE-ecccCCCccEEEEecCCC
Confidence 98 5555 77778888899999999 799999999999998764
No 11
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.95 E-value=1.2e-27 Score=204.16 Aligned_cols=160 Identities=18% Similarity=0.227 Sum_probs=129.8
Q ss_pred cCccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeC----CC--CCC-----
Q psy1489 39 ENYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDK----LP--IYP----- 107 (229)
Q Consensus 39 ~~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~----~~--~~~----- 107 (229)
.++++|+++||.+++++ .++++|.+|||||||||+|+++++++ ++|+|||+ ++ |..
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcG~G~~s~~la~~------------~~V~gvD~~~~~~~~~~~~~~~~~ 127 (305)
T 2p41_A 61 HHAVSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGL------------KNVREVKGLTKGGPGHEEPIPMST 127 (305)
T ss_dssp SCCSSTHHHHHHHHHHT-TSSCCCEEEEEETCTTSHHHHHHHTS------------TTEEEEEEECCCSTTSCCCCCCCS
T ss_pred CCccccHHHHHHHHHHc-CCCCCCCEEEEEcCCCCHHHHHHHhc------------CCEEEEeccccCchhHHHHHHhhh
Confidence 36799999999999888 77888999999999999999998875 37999999 33 221
Q ss_pred C--CCCeEEecC-CCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 108 I--DGAVVLSKC-DFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 108 ~--~~~~~~~~~-D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
. +++.++ ++ |+.+ ++..+||+|+||+++. .+.+..++... ..+|..+.++|||||.|++++
T Consensus 128 ~~~~~v~~~-~~~D~~~----------l~~~~fD~V~sd~~~~-~g~~~~d~~~~----l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 128 YGWNLVRLQ-SGVDVFF----------IPPERCDTLLCDIGES-SPNPTVEAGRT----LRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp TTGGGEEEE-CSCCTTT----------SCCCCCSEEEECCCCC-CSSHHHHHHHH----HHHHHHHHHHCCTTCEEEEEE
T ss_pred cCCCCeEEE-ecccccc----------CCcCCCCEEEECCccc-cCcchhhHHHH----HHHHHHHHHHhCCCCEEEEEe
Confidence 1 357777 77 7776 3456899999999875 55544444322 157888999999999999999
Q ss_pred cCCCC--hHHHHHHHHhhCCeeEEEcCCCCCCCCceEEEEeccCCC
Q psy1489 185 WDGRN--RPQLEESITRFYSQVKILKPPSSRSHSAELFLLGRGFKG 228 (229)
Q Consensus 185 ~~~~~--~~~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~~~ 228 (229)
+.... ..+++..++..|..+.+.|| +||..++|+|+||.+|+.
T Consensus 192 ~~~~~~~~~~~l~~l~~~f~~v~~~kP-~sR~~s~E~y~v~~~~~~ 236 (305)
T 2p41_A 192 LNPYMSSVIEKMEALQRKHGGALVRNP-LSRNSTHEMYWVSNASGN 236 (305)
T ss_dssp SCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCC
T ss_pred CCCCCchHHHHHHHHHHHcCCEEEecC-CCCCccHHHHHHHhccCC
Confidence 98743 45788888889999999999 999999999999999874
No 12
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.94 E-value=6.3e-27 Score=194.14 Aligned_cols=158 Identities=19% Similarity=0.208 Sum_probs=129.8
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---CCC-------C
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---YPI-------D 109 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---~~~-------~ 109 (229)
.|++|++|||.++++++. ++++.+||||||+||+|+++++...+ ...|+|+|+... .|. +
T Consensus 74 ~y~SR~~~KL~ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~g---------v~~V~avdvG~~~he~P~~~~ql~w~ 143 (321)
T 3lkz_A 74 HPVSRGTAKLRWLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKR---------VQEVRGYTKGGPGHEEPQLVQSYGWN 143 (321)
T ss_dssp CCSSTHHHHHHHHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTT---------EEEEEEECCCSTTSCCCCCCCBTTGG
T ss_pred CccchHHHHHHHHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcC---------CCEEEEEEcCCCCccCcchhhhcCCc
Confidence 599999999999999965 67889999999999999999887753 348999999864 121 2
Q ss_pred CCeEEecC-CCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEeecCC
Q psy1489 110 GAVVLSKC-DFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIKIWDG 187 (229)
Q Consensus 110 ~~~~~~~~-D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~~~~~ 187 (229)
.+.++ .+ |+.. ++..++|+|+||+. ..++.+..|....+ .+|..+.++|++| |.|++|+|++
T Consensus 144 lV~~~-~~~Dv~~----------l~~~~~D~ivcDig-eSs~~~~ve~~Rtl----~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 144 IVTMK-SGVDVFY----------RPSECCDTLLCDIG-ESSSSAEVEEHRTI----RVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp GEEEE-CSCCTTS----------SCCCCCSEEEECCC-CCCSCHHHHHHHHH----HHHHHHHHHHTTCCCEEEEEESCT
T ss_pred ceEEE-eccCHhh----------CCCCCCCEEEEECc-cCCCChhhhhhHHH----HHHHHHHHHhccCCCcEEEEEcCC
Confidence 36677 54 7765 44577999999998 56666665655443 4889999999999 9999999998
Q ss_pred --CChHHHHHHHHhhCCeeEEEcCCCCCCCCceEEEEec
Q psy1489 188 --RNRPQLEESITRFYSQVKILKPPSSRSHSAELFLLGR 224 (229)
Q Consensus 188 --~~~~~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~ 224 (229)
++..+.++.|+..|..+.+++|. ||++++|||||.-
T Consensus 208 Y~~~v~e~l~~lq~~fgg~lvr~P~-SRnst~EmY~vsG 245 (321)
T 3lkz_A 208 YMPKVIEKMELLQRRYGGGLVRNPL-SRNSTHEMYWVSR 245 (321)
T ss_dssp TSHHHHHHHHHHHHHHCCEEECCTT-SCTTCCCEEEETT
T ss_pred CChHHHHHHHHHHHHhCCEeEeCCC-CCCCcceEEEEec
Confidence 56678889999999999999998 9999999999964
No 13
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.94 E-value=2.2e-27 Score=196.48 Aligned_cols=147 Identities=21% Similarity=0.234 Sum_probs=123.4
Q ss_pred cCCCCeeEeecC------CCCchHHHHHHHHhccCCCCCCCC-cEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGA------APGSWSQVAVKLVNSHGYDSKQPK-GLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGc------GpG~~s~~la~~~~~~~~~~~~~~-~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
.+.|++|||||+ .||.+ ++.+. + |. +.|+++|+.++....++ ++ ++|+...
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~-~--------p~g~~VVavDL~~~~sda~~-~I-qGD~~~~--------- 164 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQW-L--------PTGTLLVDSDLNDFVSDADS-TL-IGDCATV--------- 164 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHH-S--------CTTCEEEEEESSCCBCSSSE-EE-ESCGGGE---------
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHh-C--------CCCcEEEEeeCcccccCCCe-EE-Ecccccc---------
Confidence 356899999995 99984 44444 4 55 59999999998766664 47 8996552
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhCCeeEEEcCCC
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFYSQVKILKPPS 211 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F~~v~~~kp~~ 211 (229)
..+.+||+|+|||+|+.+|+.+.++.+.+.+++.++..|.++|+|||.|++|+|++... +++..+++.|..|+++| ++
T Consensus 165 ~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~-~~L~~lrk~F~~VK~fK-~A 242 (344)
T 3r24_A 165 HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN-ADLYKLMGHFSWWTAFV-TN 242 (344)
T ss_dssp EESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC-HHHHHHHTTEEEEEEEE-EG
T ss_pred ccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH-HHHHHHHhhCCeEEEEC-CC
Confidence 23578999999999999999888776777899999999999999999999999999984 55655667999999997 69
Q ss_pred CCCCCceEEEEeccCCCC
Q psy1489 212 SRSHSAELFLLGRGFKGK 229 (229)
Q Consensus 212 sr~~s~E~Y~v~~~~~~~ 229 (229)
||.+|+|+|+||+||||.
T Consensus 243 SRa~SsEvYLVG~gfKg~ 260 (344)
T 3r24_A 243 VNASSSEAFLIGANYLGK 260 (344)
T ss_dssp GGTTSSCEEEEEEEECSS
T ss_pred CCCCCeeEEEEeeeccCC
Confidence 999999999999999974
No 14
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.94 E-value=1.6e-26 Score=194.52 Aligned_cols=157 Identities=20% Similarity=0.229 Sum_probs=121.6
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CCCC----
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YPID---- 109 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~~~---- 109 (229)
.|++|+++||.++.++ ..+++|.+|||||||||+|+.+++++ ++|+|||+++| .+..
T Consensus 62 ~~~sR~a~KL~~i~~~-~~~~~g~~VLDlGcGtG~~s~~la~~------------~~V~gVD~s~m~~~a~~~~~~~~~~ 128 (276)
T 2wa2_A 62 HAVSRGTAKLAWIDER-GGVELKGTVVDLGCGRGSWSYYAASQ------------PNVREVKAYTLGTSGHEKPRLVETF 128 (276)
T ss_dssp ---CHHHHHHHHHHHT-TSCCCCEEEEEESCTTCHHHHHHHTS------------TTEEEEEEECCCCTTSCCCCCCCCT
T ss_pred CcCchHHHHHHHHHHc-CCCCCCCEEEEeccCCCHHHHHHHHc------------CCEEEEECchhhhhhhhchhhhhhc
Confidence 4899999999999888 66788999999999999999998875 38999999997 2222
Q ss_pred --CCeEE-ecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCC--EEEEee
Q psy1489 110 --GAVVL-SKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGA--DCLIKI 184 (229)
Q Consensus 110 --~~~~~-~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG--~~v~~~ 184 (229)
++.++ +++|+.+ +++++||+|+||++ ...+.+..++... ..+|.++.++|+||| .|++++
T Consensus 129 ~~~v~~~~~~~D~~~----------l~~~~fD~Vvsd~~-~~~~~~~~d~~~~----l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 129 GWNLITFKSKVDVTK----------MEPFQADTVLCDIG-ESNPTAAVEASRT----LTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp TGGGEEEECSCCGGG----------CCCCCCSEEEECCC-CCCSCHHHHHHHH----HHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CCCeEEEeccCcHhh----------CCCCCcCEEEECCC-cCCCchhhhHHHH----HHHHHHHHHHhccCCCcEEEEEe
Confidence 34443 1455554 45678999999987 5555544443322 237888999999999 999999
Q ss_pred cCCCChH---HHHHHHHhhCCeeEEEcCCCCCCCCceEEEEeccC
Q psy1489 185 WDGRNRP---QLEESITRFYSQVKILKPPSSRSHSAELFLLGRGF 226 (229)
Q Consensus 185 ~~~~~~~---~~~~~l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~ 226 (229)
|. +... +++..++..|..+.+. |.+||+.++|+|+||.++
T Consensus 194 ~~-~~~~~~~~~l~~l~~~f~~v~v~-P~~sR~~s~E~y~v~~~~ 236 (276)
T 2wa2_A 194 LN-PYSCDVLEALMKMQARFGGGLIR-VPLSRNSTHEMYFVSGIK 236 (276)
T ss_dssp SC-CCSHHHHHHHHHHHHHHCCEEEC-CTTSCTTCCCEEEESSCC
T ss_pred CC-CCchhHHHHHHHHHHHcCCEEEE-cCCCCCcchheEEecccC
Confidence 98 4445 6677788889999998 999999999999999765
No 15
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.87 E-value=1e-22 Score=172.06 Aligned_cols=147 Identities=22% Similarity=0.279 Sum_probs=117.4
Q ss_pred ccCCCCeeEeecC------CCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeE-EecCCCCChhHHHHHHH
Q psy1489 58 FLRPGLKVLDCGA------APGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVV-LSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 58 ~~~~g~~VLDlGc------GpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~-~~~~D~~~~~~~~~i~~ 130 (229)
.+++|.+|||||| |||. ..++++.+ +.++|+|+|+++. ++++++ + ++|+.+..
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~--------~~~~V~gvDis~~--v~~v~~~i-~gD~~~~~------- 119 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP--------TGTLLVDSDLNDF--VSDADSTL-IGDCATVH------- 119 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSC--------TTCEEEEEESSCC--BCSSSEEE-ESCGGGCC-------
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC--------CCCEEEEEECCCC--CCCCEEEE-ECccccCC-------
Confidence 3578999999999 6677 66677664 4689999999996 678899 9 99987632
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeEEEcC
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVKILKP 209 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~~~kp 209 (229)
+ .++||+|+||+.+...|.+..++.....+...+++++.++|||||+|+++++......++.+.++.+ |..+.+.
T Consensus 120 -~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~-- 195 (290)
T 2xyq_A 120 -T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVT-- 195 (290)
T ss_dssp -C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEE--
T ss_pred -c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEE--
Confidence 1 3679999999987666666555443344566889999999999999999999888888999999988 8877776
Q ss_pred CCCCCCCceEEEEeccCCCC
Q psy1489 210 PSSRSHSAELFLLGRGFKGK 229 (229)
Q Consensus 210 ~~sr~~s~E~Y~v~~~~~~~ 229 (229)
++|..++|.|+||++|+|+
T Consensus 196 -asr~~s~e~~lv~~~~~~~ 214 (290)
T 2xyq_A 196 -NVNASSSEAFLIGANYLGK 214 (290)
T ss_dssp -GGGTTSSCEEEEEEEECSS
T ss_pred -EcCCCchheEEecCCccCC
Confidence 7999999999999999863
No 16
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.80 E-value=1.2e-19 Score=149.00 Aligned_cols=137 Identities=18% Similarity=0.238 Sum_probs=113.8
Q ss_pred cCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC---------CCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccE
Q psy1489 69 GAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP---------IYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDV 139 (229)
Q Consensus 69 GcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~---------~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~ 139 (229)
.+++|-+...+.+.. ..+|+-||-.- |.+++++.++.+.|++++.. .+++|+
T Consensus 149 ~~~~~~~~~~~~k~~----------g~~vl~v~~~~~~p~k~v~wi~Pi~GAt~~~~lDfg~p~~---------~~k~Dv 209 (320)
T 2hwk_A 149 EHPQSDFSSFVSKLK----------GRTVLVVGEKLSVPGKMVDWLSDRPEATFRARLDLGIPGD---------VPKYDI 209 (320)
T ss_dssp CCCCCCCHHHHHTSS----------CSEEEEEESCCCCTTSEEEEEESSTTCSEECCGGGCSCTT---------SCCEEE
T ss_pred ccCCCCHHHHHhhCC----------CcEEEEEecccccCCceeEeeccCCCceeecccccCCccc---------cCcCCE
Confidence 567777877777653 35777776321 24567777776788887542 157999
Q ss_pred EEeCCCCCCCCCC-c--ccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC--ChHHHHHHHHhhCCeeEEEcCCCCCC
Q psy1489 140 VLSDMAPNATGMR-E--MDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR--NRPQLEESITRFYSQVKILKPPSSRS 214 (229)
Q Consensus 140 V~sd~~~~~~g~~-~--~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~--~~~~~~~~l~~~F~~v~~~kp~~sr~ 214 (229)
|+|||+++.+|++ . .||...+.+ +++.|.++|+|||+|++|+|.+. ..+.++..+.+.|..|.++||.+||+
T Consensus 210 V~SDMApn~sGh~yqQC~DHarii~L---al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ASR~ 286 (320)
T 2hwk_A 210 IFVNVRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPKSSLE 286 (320)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCTTCCS
T ss_pred EEEcCCCCCCCccccccchHHHHHHH---HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCCCccc
Confidence 9999999999998 6 688877776 88999999999999999999998 68899999999999999999999999
Q ss_pred CCceEEEEeccCCC
Q psy1489 215 HSAELFLLGRGFKG 228 (229)
Q Consensus 215 ~s~E~Y~v~~~~~~ 228 (229)
|+|+|+|++||+|
T Consensus 287 -StEvf~La~gf~g 299 (320)
T 2hwk_A 287 -ETEVLFVFIGYDR 299 (320)
T ss_dssp -TTCEEEEEEEECC
T ss_pred -cceEEEEEEeecC
Confidence 9999999999996
No 17
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.64 E-value=1.1e-15 Score=128.97 Aligned_cols=157 Identities=13% Similarity=0.153 Sum_probs=106.5
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCCC-----CCCeE
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYPI-----DGAVV 113 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~~-----~~~~~ 113 (229)
.|.+|+++||..+.+.+.+..+|.+|||+|||||.++..++++ +.++|+|||+++ |... +.+..
T Consensus 64 ~yvsrg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~----------ga~~V~aVDvs~~mL~~a~r~~~rv~~ 133 (291)
T 3hp7_A 64 RYVSRGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN----------GAKLVYAVDVGTNQLVWKLRQDDRVRS 133 (291)
T ss_dssp CSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT----------TCSEEEEECSSSSCSCHHHHTCTTEEE
T ss_pred ccccchHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhC----------CCCEEEEEECCHHHHHHHHHhCcccce
Confidence 5899999999999999987667899999999999999998876 346999999998 4321 33333
Q ss_pred EecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee---cCCC--
Q psy1489 114 LSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI---WDGR-- 188 (229)
Q Consensus 114 ~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~---~~~~-- 188 (229)
....|+..... +.++...||+|++|.++. + ...+|.++.++|+|||.+++-+ |...
T Consensus 134 ~~~~ni~~l~~-----~~l~~~~fD~v~~d~sf~-----s---------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~ 194 (291)
T 3hp7_A 134 MEQYNFRYAEP-----VDFTEGLPSFASIDVSFI-----S---------LNLILPALAKILVDGGQVVALVKPQFEAGRE 194 (291)
T ss_dssp ECSCCGGGCCG-----GGCTTCCCSEEEECCSSS-----C---------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGG
T ss_pred ecccCceecch-----hhCCCCCCCEEEEEeeHh-----h---------HHHHHHHHHHHcCcCCEEEEEECcccccChh
Confidence 31334432111 124445699999988652 1 1467889999999999998852 3211
Q ss_pred ----------------ChHHHHHHHHhh-CCeeEE-EcCCCCCCCCceEEEEecc
Q psy1489 189 ----------------NRPQLEESITRF-YSQVKI-LKPPSSRSHSAELFLLGRG 225 (229)
Q Consensus 189 ----------------~~~~~~~~l~~~-F~~v~~-~kp~~sr~~s~E~Y~v~~~ 225 (229)
...++...+... |....+ .-|.....+|.|..+-++.
T Consensus 195 ~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 195 QIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp GCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred hcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 023344455444 543333 3366667789998776643
No 18
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.63 E-value=8.6e-16 Score=127.45 Aligned_cols=152 Identities=14% Similarity=0.200 Sum_probs=104.3
Q ss_pred cC-CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHH
Q psy1489 59 LR-PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQ 125 (229)
Q Consensus 59 ~~-~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~ 125 (229)
++ ++.+|||+|||+|.++..++++. .++|+|+|+++ + ..+. ++.++ ++|+.+..
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~----------~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~-~~D~~~~~-- 112 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRT----------KAKIVGVEIQERLADMAKRSVAYNQLEDQIEII-EYDLKKIT-- 112 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTC----------CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEE-CSCGGGGG--
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhc----------CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEE-ECcHHHhh--
Confidence 55 78999999999999999998873 24999999996 2 1233 48888 99987732
Q ss_pred HHHHHHhCCCCccEEEeCCCCCCC---CCCcccH------HHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHH
Q psy1489 126 DRLVTILKDDKLDVVLSDMAPNAT---GMREMDH------DLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEES 196 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~~~~~---g~~~~d~------~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~ 196 (229)
..+++++||+|++|++.... +....+. .........++..+.++|+|||.|++ ++......++...
T Consensus 113 ----~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~~~~~~~~~~ 187 (259)
T 3lpm_A 113 ----DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-VHRPERLLDIIDI 187 (259)
T ss_dssp ----GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-EECTTTHHHHHHH
T ss_pred ----hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-EEcHHHHHHHHHH
Confidence 22446789999998764322 2211111 11112345788999999999999998 5566677888888
Q ss_pred HHhhCCeeEEEcCCCCCCCCceEEEEeccCCC
Q psy1489 197 ITRFYSQVKILKPPSSRSHSAELFLLGRGFKG 228 (229)
Q Consensus 197 l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~~~ 228 (229)
++...-.+...++..+++.....+++....|+
T Consensus 188 l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 188 MRKYRLEPKRIQFVHPRSDREANTVLVEGIKD 219 (259)
T ss_dssp HHHTTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred HHHCCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence 88764445555666777777777777766653
No 19
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.63 E-value=1.2e-15 Score=124.94 Aligned_cols=155 Identities=21% Similarity=0.218 Sum_probs=102.6
Q ss_pred ccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CCCCC
Q psy1489 41 YRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PIDGA 111 (229)
Q Consensus 41 ~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~~~~ 111 (229)
++++.+..++...+.+. +++|.+|||+|||||+++.++++.++ +.|+|+|+|+++ |. ...++
T Consensus 57 ~~skla~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~--------~~G~V~avD~s~~~l~~l~~~a~~r~nv 127 (232)
T 3id6_C 57 FRSKLAGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIE--------LNGKAYGVEFSPRVVRELLLVAQRRPNI 127 (232)
T ss_dssp TTCHHHHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHT--------TTSEEEEEECCHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhC--------CCCEEEEEECcHHHHHHHHHHhhhcCCe
Confidence 46666666665433333 57899999999999999999999987 788999999998 31 13678
Q ss_pred eEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC----
Q psy1489 112 VVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG---- 187 (229)
Q Consensus 112 ~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~---- 187 (229)
.++ .+|++.+.... .+ .++||+|++|+++ .+. ...++..+.++|||||+|++.+...
T Consensus 128 ~~i-~~Da~~~~~~~----~~-~~~~D~I~~d~a~-------~~~------~~il~~~~~~~LkpGG~lvisik~~~~d~ 188 (232)
T 3id6_C 128 FPL-LADARFPQSYK----SV-VENVDVLYVDIAQ-------PDQ------TDIAIYNAKFFLKVNGDMLLVIKARSIDV 188 (232)
T ss_dssp EEE-ECCTTCGGGTT----TT-CCCEEEEEECCCC-------TTH------HHHHHHHHHHHEEEEEEEEEEEC------
T ss_pred EEE-Ecccccchhhh----cc-ccceEEEEecCCC-------hhH------HHHHHHHHHHhCCCCeEEEEEEccCCccc
Confidence 888 99988753211 11 4589999999864 111 1223445666999999999865221
Q ss_pred -----CChHHHHHHHHhh-CCeeEEEcCCCCCCCCceEEEEecc
Q psy1489 188 -----RNRPQLEESITRF-YSQVKILKPPSSRSHSAELFLLGRG 225 (229)
Q Consensus 188 -----~~~~~~~~~l~~~-F~~v~~~kp~~sr~~s~E~Y~v~~~ 225 (229)
.......+.|+.. |+-++.... ..-+...+++||+.
T Consensus 189 t~~~~e~~~~~~~~L~~~gf~~~~~~~l--~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 189 TKDPKEIYKTEVEKLENSNFETIQIINL--DPYDKDHAIVLSKY 230 (232)
T ss_dssp -CCSSSSTTHHHHHHHHTTEEEEEEEEC--TTTCSSCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEecc--CCCcCceEEEEEEe
Confidence 1234555666654 655554432 11234566777764
No 20
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.62 E-value=2.2e-15 Score=130.14 Aligned_cols=88 Identities=27% Similarity=0.302 Sum_probs=72.9
Q ss_pred cCccchhhhhhHhhhhhc-------CccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC----
Q psy1489 39 ENYRCRSAFKLLEIDSKI-------KFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP---- 107 (229)
Q Consensus 39 ~~~~~r~~~kl~~i~~~~-------~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~---- 107 (229)
.+..||+.+||.|+...| ..+++|++||||||+||+|++.++++. ++|+|||+.+|.+
T Consensus 182 ~~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg-----------~~V~aVD~~~l~~~l~~ 250 (375)
T 4auk_A 182 ADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRN-----------MWVYSVDNGPMAQSLMD 250 (375)
T ss_dssp TTSSCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTT-----------CEEEEECSSCCCHHHHT
T ss_pred CCCCCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCC-----------CEEEEEEhhhcChhhcc
Confidence 357899999999987666 346789999999999999999998763 6999999998764
Q ss_pred CCCCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCC
Q psy1489 108 IDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 108 ~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~ 146 (229)
.+++.++ ++|..... .+...||+|+|||.+
T Consensus 251 ~~~V~~~-~~d~~~~~--------~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 251 TGQVTWL-REDGFKFR--------PTRSNISWMVCDMVE 280 (375)
T ss_dssp TTCEEEE-CSCTTTCC--------CCSSCEEEEEECCSS
T ss_pred CCCeEEE-eCcccccc--------CCCCCcCEEEEcCCC
Confidence 5789999 99977632 335689999999976
No 21
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=5.4e-15 Score=122.94 Aligned_cols=155 Identities=16% Similarity=0.099 Sum_probs=100.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------------CCCC-CCeEEecCCCCChh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------------YPID-GAVVLSKCDFTQPD 123 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------------~~~~-~~~~~~~~D~~~~~ 123 (229)
..++.+|||+|||+|.++..++++. +..+|+|+|+++ + ..+. ++.++ ++|+.+..
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~---------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~-~~D~~~~~ 103 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL---------EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVL-EADVTLRA 103 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC---------TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEE-ECCTTCCH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEE-eCCHHHHh
Confidence 4578899999999999999999885 557999999996 1 1122 37888 99998742
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCC-CCCcccHHHHH------HHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHH
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNAT-GMREMDHDLIT------QLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEES 196 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~-g~~~~d~~~~~------~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~ 196 (229)
. ......+++++||+|++|++.... +....+..... .....++..+.++|+|||.|++. +......++.+.
T Consensus 104 ~-~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~ 181 (260)
T 2ozv_A 104 K-ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI-SRPQSVAEIIAA 181 (260)
T ss_dssp H-HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE-ECGGGHHHHHHH
T ss_pred h-hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE-EcHHHHHHHHHH
Confidence 1 111122456789999999764322 11111111111 11457889999999999999984 455567778888
Q ss_pred HHhhCCeeEEEcCCCCCCCCceEEEEecc
Q psy1489 197 ITRFYSQVKILKPPSSRSHSAELFLLGRG 225 (229)
Q Consensus 197 l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~ 225 (229)
++..|..+.+.............++|.-.
T Consensus 182 l~~~~~~~~i~~v~~~~~~~~~~~lv~~~ 210 (260)
T 2ozv_A 182 CGSRFGGLEITLIHPRPGEDAVRMLVTAI 210 (260)
T ss_dssp HTTTEEEEEEEEEESSTTSCCCEEEEEEE
T ss_pred HHhcCCceEEEEEcCCCCCCceEEEEEEE
Confidence 87777766666543333445556666543
No 22
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.58 E-value=5.9e-15 Score=120.72 Aligned_cols=99 Identities=21% Similarity=0.306 Sum_probs=79.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
++||++|||+|||+|.++.++|+.+| +.|+|+|+|+++ | ....++..+ .+|..++...
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG--------~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V-~~d~~~p~~~---- 141 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIG--------PRGRIYGVEFAPRVMRDLLTVVRDRRNIFPI-LGDARFPEKY---- 141 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--------TTCEEEEEECCHHHHHHHHHHSTTCTTEEEE-ESCTTCGGGG----
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhC--------CCceEEEEeCCHHHHHHHHHhhHhhcCeeEE-EEeccCcccc----
Confidence 68999999999999999999999998 889999999997 2 234678888 8888875421
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
......+|+|++|.+. + + ....++.++.++|||||.+++.+
T Consensus 142 -~~~~~~vDvVf~d~~~-----~--~------~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 142 -RHLVEGVDGLYADVAQ-----P--E------QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp -TTTCCCEEEEEECCCC-----T--T------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -ccccceEEEEEEeccC-----C--h------hHHHHHHHHHHhccCCCEEEEEE
Confidence 1345689999998753 1 1 23467889999999999999865
No 23
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.57 E-value=5e-15 Score=123.37 Aligned_cols=102 Identities=14% Similarity=0.223 Sum_probs=76.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----------CCCCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----------PIDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----------~~~~~~~~~~~D~~~~~~~~ 126 (229)
+++|.+|||||||+|.++..++++.+. +..+|+|||+|+ |. ...+++++ ++|+.+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~-------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~-~~D~~~----- 134 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHH-------DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVI-EGDIRD----- 134 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCS-------SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEE-ESCTTT-----
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCC-------CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEe-eccccc-----
Confidence 678999999999999999999987531 346999999997 31 12367888 999887
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
++.+.||+|++.... +.... .....+|+++.++|||||.|++.....
T Consensus 135 -----~~~~~~d~v~~~~~l-----~~~~~----~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 135 -----IAIENASMVVLNFTL-----QFLEP----SERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp -----CCCCSEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -----ccccccccceeeeee-----eecCc----hhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 445679999996643 11111 223467899999999999999865433
No 24
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.54 E-value=9.8e-15 Score=114.52 Aligned_cols=145 Identities=12% Similarity=0.117 Sum_probs=88.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
++++.+|||+|||+|.++..++++ + ++|+|+|+++ |. .+++++++ ..|..+.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~-~----------~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~-~~~~~~l----- 82 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL-S----------KKVYAFDVQEQALGKTSQRLSDLGIENTELI-LDGHENL----- 82 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT-S----------SEEEEEESCHHHHHHHHHHHHHHTCCCEEEE-ESCGGGG-----
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-C----------CEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCcHHHH-----
Confidence 567899999999999999999876 3 6999999997 21 23567888 7665442
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCC-----hHHHHHHHHhh--
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRN-----RPQLEESITRF-- 200 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~-----~~~~~~~l~~~-- 200 (229)
.. +.+++||+|++++.....+.+ ...........++..+.++|||||.+++..+.+.. ...+.+.+...
T Consensus 83 -~~-~~~~~fD~v~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (185)
T 3mti_A 83 -DH-YVREPIRAAIFNLGYLPSADK--SVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQ 158 (185)
T ss_dssp -GG-TCCSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCT
T ss_pred -Hh-hccCCcCEEEEeCCCCCCcch--hcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCC
Confidence 11 336789999997532110000 01111233457789999999999999998876431 12333333322
Q ss_pred -CCeeEEEcCCCCCCCCceEEEEec
Q psy1489 201 -YSQVKILKPPSSRSHSAELFLLGR 224 (229)
Q Consensus 201 -F~~v~~~kp~~sr~~s~E~Y~v~~ 224 (229)
...+....+...+......|+|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~i~~ 183 (185)
T 3mti_A 159 RVFTAMLYQPLNQINTPPFLVMLEK 183 (185)
T ss_dssp TTEEEEEEEESSCSSCCCEEEEEEE
T ss_pred ceEEEEEehhhccCCCCCeEEEEEe
Confidence 123334445444456666776654
No 25
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.54 E-value=1.3e-14 Score=120.56 Aligned_cols=97 Identities=18% Similarity=0.100 Sum_probs=75.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----CCCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----YPIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----~~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
..+.+|||||||+|.++..++++. .+|+|+|+|+ | ...+++.++ ++|+.+.. +++
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~-----------~~v~gvD~s~~ml~~a~~~~~v~~~-~~~~e~~~--------~~~ 97 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF-----------ERVHAVDPGEAQIRQALRHPRVTYA-VAPAEDTG--------LPP 97 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC-----------SEEEEEESCHHHHHTCCCCTTEEEE-ECCTTCCC--------CCS
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC-----------CEEEEEeCcHHhhhhhhhcCCceee-hhhhhhhc--------ccC
Confidence 456799999999999999988753 5899999997 3 234688898 99988732 668
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR 188 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~ 188 (229)
++||+|++..+. +..+. ..++.++.++|||||.|++..+...
T Consensus 98 ~sfD~v~~~~~~-----h~~~~-------~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 98 ASVDVAIAAQAM-----HWFDL-------DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp SCEEEEEECSCC-----TTCCH-------HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CcccEEEEeeeh-----hHhhH-------HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 899999996643 33332 3578899999999999988665543
No 26
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.51 E-value=1.5e-13 Score=110.68 Aligned_cols=138 Identities=19% Similarity=0.212 Sum_probs=89.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----C----CCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----Y----PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----~----~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+++|.+|||+|||||.++..+++.. +.++|+|+|+++ | . ...++.++ .+|+.++...
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~---------~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~-~~d~~~~~~~---- 120 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIV---------DEGIIYAVEYSAKPFEKLLELVRERNNIIPL-LFDASKPWKY---- 120 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHT---------TTSEEEEECCCHHHHHHHHHHHHHCSSEEEE-CSCTTCGGGT----
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHc---------CCCEEEEEECCHHHHHHHHHHHhcCCCeEEE-EcCCCCchhh----
Confidence 4678999999999999999999886 347999999997 2 1 13467788 8888774210
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC-----CCChHHHH----HHHHhh
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD-----GRNRPQLE----ESITRF 200 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~-----~~~~~~~~----~~l~~~ 200 (229)
..+ .++||+|+++... .+ ....++.++.++|||||.|++.+.. .....++. +.++..
T Consensus 121 ~~~-~~~fD~V~~~~~~-------~~------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (210)
T 1nt2_A 121 SGI-VEKVDLIYQDIAQ-------KN------QIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD 186 (210)
T ss_dssp TTT-CCCEEEEEECCCS-------TT------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT
T ss_pred ccc-ccceeEEEEeccC-------hh------HHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh
Confidence 012 3689999998532 11 1234578899999999999986411 12234432 225544
Q ss_pred CCeeEEEcCCCCCCCCceEEEEeccC
Q psy1489 201 YSQVKILKPPSSRSHSAELFLLGRGF 226 (229)
Q Consensus 201 F~~v~~~kp~~sr~~s~E~Y~v~~~~ 226 (229)
|..++...... -+.....+|++.|
T Consensus 187 f~~~~~~~~~p--~~~~h~~~~~~~~ 210 (210)
T 1nt2_A 187 FKIVKHGSLMP--YHRDHIFIHAYRF 210 (210)
T ss_dssp SEEEEEEECTT--TCTTEEEEEEEEC
T ss_pred cEEeeeecCCC--CCCCcEEEEEEcC
Confidence 76555554311 1223456777765
No 27
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.51 E-value=1.4e-13 Score=109.72 Aligned_cols=149 Identities=13% Similarity=0.061 Sum_probs=87.3
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCCC--C-------CCeEEecCCCCChhHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYPI--D-------GAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~~--~-------~~~~~~~~D~~~~~~~~~i~ 129 (229)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++ +... . +++++ ++|+.+ .+.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~d~~~-----~~~ 93 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC---------PGVSVTAVDLSMDALAVARRNAERFGAVVDWA-AADGIE-----WLI 93 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC---------TTEEEEEEECC-------------------CC-HHHHHH-----HHH
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHHhCCceEEE-EcchHh-----hhh
Confidence 678999999999999999999875 557999999998 2211 1 12333 333222 111
Q ss_pred H-HhCCCCccEEEeCCCCCCCCCCc-ccHHH--------------HHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHH
Q psy1489 130 T-ILKDDKLDVVLSDMAPNATGMRE-MDHDL--------------ITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQL 193 (229)
Q Consensus 130 ~-~~~~~~~D~V~sd~~~~~~g~~~-~d~~~--------------~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~ 193 (229)
. ....++||+|++|.+........ ..... .+.....++..+.++|+|||.+++-.........+
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 173 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEV 173 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHH
T ss_pred hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHH
Confidence 1 01237899999987642221100 00000 01112577888999999999944334445556667
Q ss_pred HHHHH--h-hCCeeEEEcCCCCCCCCceEEEEeccCC
Q psy1489 194 EESIT--R-FYSQVKILKPPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 194 ~~~l~--~-~F~~v~~~kp~~sr~~s~E~Y~v~~~~~ 227 (229)
.+.+. . -|..+.+.+....+ +.+++++...
T Consensus 174 ~~~l~~~~~gf~~~~~~~~~~~~----~r~~~~~~~~ 206 (215)
T 4dzr_A 174 ARLFAPWRERGFRVRKVKDLRGI----DRVIAVTREP 206 (215)
T ss_dssp HHHTGGGGGGTEECCEEECTTSC----EEEEEEEECC
T ss_pred HHHHHHhhcCCceEEEEEecCCC----EEEEEEEEcC
Confidence 77666 3 37777777654333 6677766543
No 28
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.47 E-value=8e-14 Score=111.12 Aligned_cols=117 Identities=16% Similarity=0.135 Sum_probs=87.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
++++.+|||+|||+|.++..+++.. +.++|+|+|+++ +. ..+++.++ .+|+.+..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~---- 103 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLM---------PNGRIFALERNPQYLGFIRDNLKKFVARNVTLV-EAFAPEGL---- 103 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHC---------TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEE-ECCTTTTC----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-eCChhhhh----
Confidence 4678999999999999999999874 568999999997 21 23568888 89886521
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeEE
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVKI 206 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~~ 206 (229)
.....||+|+++.... ....++..+.++|+|||.+++.........++.+.++.. | .+++
T Consensus 104 ----~~~~~~D~i~~~~~~~--------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 104 ----DDLPDPDRVFIGGSGG--------------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY-MVEV 164 (204)
T ss_dssp ----TTSCCCSEEEESCCTT--------------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC-EEEE
T ss_pred ----hcCCCCCEEEECCCCc--------------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC-ceeE
Confidence 1236799999987531 134678889999999999999766555566777777665 5 5444
Q ss_pred Ec
Q psy1489 207 LK 208 (229)
Q Consensus 207 ~k 208 (229)
..
T Consensus 165 ~~ 166 (204)
T 3e05_A 165 AC 166 (204)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 29
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.47 E-value=2.6e-13 Score=108.96 Aligned_cols=122 Identities=20% Similarity=0.302 Sum_probs=90.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++..+ +..+|+|+|+++ + ..++++.++ .+|+.+..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-~~d~~~~~---- 101 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVG--------EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVL-KSEENKIP---- 101 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHT--------TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEE-ECBTTBCS----
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-ecccccCC----
Confidence 46788999999999999999999875 567999999997 2 123568888 89987632
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC------------ChHHHHH
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR------------NRPQLEE 195 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~------------~~~~~~~ 195 (229)
+++++||+|++..... ..+ ....++.++.++|+|||.+++..+... ...++..
T Consensus 102 ----~~~~~fD~v~~~~~l~-----~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (219)
T 3dh0_A 102 ----LPDNTVDFIFMAFTFH-----ELS------EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGL 166 (219)
T ss_dssp ----SCSSCEEEEEEESCGG-----GCS------SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHH
T ss_pred ----CCCCCeeEEEeehhhh-----hcC------CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHH
Confidence 4567899999976431 111 135678899999999999998765422 3577788
Q ss_pred HHHhh-CCeeEEEc
Q psy1489 196 SITRF-YSQVKILK 208 (229)
Q Consensus 196 ~l~~~-F~~v~~~k 208 (229)
.++.. |..+.+..
T Consensus 167 ~l~~~Gf~~~~~~~ 180 (219)
T 3dh0_A 167 ILEDAGIRVGRVVE 180 (219)
T ss_dssp HHHHTTCEEEEEEE
T ss_pred HHHHCCCEEEEEEe
Confidence 88776 76666543
No 30
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.45 E-value=4.6e-13 Score=119.57 Aligned_cols=126 Identities=21% Similarity=0.286 Sum_probs=87.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.++|.+|||+|||||+.+..+++.++ +.++|+|+|+++ + ..+.++.++ .+|..+
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~--------~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~-~~Da~~------ 167 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMK--------GKGLLVTNEIFPKRAKILSENIERWGVSNAIVT-NHAPAE------ 167 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHT--------TCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEE-CCCHHH------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEE-eCCHHH------
Confidence 46799999999999999999999875 557999999997 1 124567777 777544
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccH-----------HHHHHHHHHHHHHHHHcccCCCEEEEeecC---CCChHHH
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDH-----------DLITQLAIAVIRFAVTYSKPGADCLIKIWD---GRNRPQL 193 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~-----------~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~---~~~~~~~ 193 (229)
+...+ ++.||+|++|+++...|....+. .....++..+|..+.++|||||.++..+.+ ..+...+
T Consensus 168 l~~~~-~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv 246 (456)
T 3m4x_A 168 LVPHF-SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEII 246 (456)
T ss_dssp HHHHH-TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHH
T ss_pred hhhhc-cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHH
Confidence 22222 56899999999866555432221 122345568899999999999999875533 2333334
Q ss_pred HHHHHhh
Q psy1489 194 EESITRF 200 (229)
Q Consensus 194 ~~~l~~~ 200 (229)
...+.++
T Consensus 247 ~~~l~~~ 253 (456)
T 3m4x_A 247 SWLVENY 253 (456)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 4555543
No 31
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.45 E-value=1.1e-13 Score=109.66 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=95.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
++++.+|||+|||+|.++..+++..+ +.++|+|+|+++ +. .+ +++.++ ++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~--- 87 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVG--------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLI-KDGHQNMD--- 87 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHC--------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEE-CSCGGGGG---
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEE-ECCHHHHh---
Confidence 46789999999999999999999875 567999999997 21 12 467888 89876631
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCC-----hHHHHHHHHhhC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRN-----RPQLEESITRFY 201 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~-----~~~~~~~l~~~F 201 (229)
. ..++.||+|+++.+....+.+... ........++..+.++|+|||.+++..+.+.. ...+.+.+...-
T Consensus 88 ---~-~~~~~fD~v~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (197)
T 3eey_A 88 ---K-YIDCPVKAVMFNLGYLPSGDHSIS--TRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVD 161 (197)
T ss_dssp ---G-TCCSCEEEEEEEESBCTTSCTTCB--CCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSC
T ss_pred ---h-hccCCceEEEEcCCcccCcccccc--cCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCC
Confidence 1 235789999998753111111110 01123346889999999999999988765421 223333333221
Q ss_pred -C--eeEEEcCCCCCCCCceEEEEeccCC
Q psy1489 202 -S--QVKILKPPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 202 -~--~v~~~kp~~sr~~s~E~Y~v~~~~~ 227 (229)
. .+..+.. ..+.+....++|.++.+
T Consensus 162 ~~~~~v~~~~~-~~~~~~pp~~~~~~~~~ 189 (197)
T 3eey_A 162 QKKFIVQRTDF-INQANCPPILVCIEKIS 189 (197)
T ss_dssp TTTEEEEEEEE-TTCCSCCCEEEEEEECC
T ss_pred CCcEEEEEEEe-ccCccCCCeEEEEEEcc
Confidence 1 2222322 34556666666666554
No 32
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=2.8e-13 Score=107.63 Aligned_cols=132 Identities=12% Similarity=0.152 Sum_probs=94.7
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHhCCC
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTILKDD 135 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~~~~ 135 (229)
+.+|||+|||+|.++..+++. + .+|+|+|+++ |. ..+++.++ .+|+.+.. ++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~----------~~v~gvD~s~~~~~~a~~~~~~~~~~-~~d~~~~~--------~~~~ 101 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-G----------HQIEGLEPATRLVELARQTHPSVTFH-HGTITDLS--------DSPK 101 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-T----------CCEEEECCCHHHHHHHHHHCTTSEEE-CCCGGGGG--------GSCC
T ss_pred CCeEEEecCCCCHHHHHHHhc-C----------CeEEEEeCCHHHHHHHHHhCCCCeEE-eCcccccc--------cCCC
Confidence 789999999999999998876 3 4899999997 21 24578898 99887632 5578
Q ss_pred CccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC---------------ChHHHHHHHHhh
Q psy1489 136 KLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR---------------NRPQLEESITRF 200 (229)
Q Consensus 136 ~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~---------------~~~~~~~~l~~~ 200 (229)
.||+|++........ . +....++..+.++|+|||.+++..+... ...++...++..
T Consensus 102 ~fD~v~~~~~l~~~~--~-------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 172 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMG--P-------GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETA 172 (203)
T ss_dssp CEEEEEEESSSTTCC--T-------TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHT
T ss_pred CeEEEEehhhHhcCC--H-------HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHC
Confidence 999999976542111 0 1235788899999999999998775432 257788888776
Q ss_pred -CCeeEEEcCCCCCCCCceEEEEeccC
Q psy1489 201 -YSQVKILKPPSSRSHSAELFLLGRGF 226 (229)
Q Consensus 201 -F~~v~~~kp~~sr~~s~E~Y~v~~~~ 226 (229)
|..+.+..-.. ....|++..+.
T Consensus 173 Gf~~~~~~~~~~----~p~~~l~~~~~ 195 (203)
T 3h2b_A 173 GFQVTSSHWDPR----FPHAYLTAEAS 195 (203)
T ss_dssp TEEEEEEEECTT----SSEEEEEEEEC
T ss_pred CCcEEEEEecCC----Ccchhhhhhhh
Confidence 76665554322 56666665544
No 33
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.45 E-value=2.5e-13 Score=106.33 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=91.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCC--CeEEecCCCCChhHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDG--AVVLSKCDFTQPDIQ 125 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~--~~~~~~~D~~~~~~~ 125 (229)
..++.+|||+|||+|.++..+++. + .+|+|+|+++ + ..+++ +.++ .+|+.+.
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~-~----------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~-~~d~~~~--- 114 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE-V----------KSTTMADINRRAIKLAKENIKLNNLDNYDIRVV-HSDLYEN--- 114 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG-S----------SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE-ECSTTTT---
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc-C----------CeEEEEECCHHHHHHHHHHHHHcCCCccceEEE-ECchhcc---
Confidence 357889999999999999998876 3 6999999996 2 12344 8888 8888763
Q ss_pred HHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhCCeeE
Q psy1489 126 DRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFYSQVK 205 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F~~v~ 205 (229)
++++.||+|+++.+.. +. ......++..+.++|+|||.+++.........++.+.+++.|..++
T Consensus 115 ------~~~~~~D~v~~~~~~~----~~------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~ 178 (194)
T 1dus_A 115 ------VKDRKYNKIITNPPIR----AG------KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVE 178 (194)
T ss_dssp ------CTTSCEEEEEECCCST----TC------HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCE
T ss_pred ------cccCCceEEEECCCcc----cc------hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceE
Confidence 3356899999976431 10 1234578889999999999999988776666668888888888887
Q ss_pred EEc
Q psy1489 206 ILK 208 (229)
Q Consensus 206 ~~k 208 (229)
+.+
T Consensus 179 ~~~ 181 (194)
T 1dus_A 179 TVT 181 (194)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 34
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.44 E-value=9.3e-13 Score=108.42 Aligned_cols=99 Identities=17% Similarity=0.189 Sum_probs=75.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----C---CCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----P---IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~---~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++ +. . .+++.++ .+|+.+..
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~d~~~~~------ 115 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYG----------AHTHGIDICSNIVNMANERVSGNNKIIFE-ANDILTKE------ 115 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC----------CEEEEEESCHHHHHHHHHTCCSCTTEEEE-ECCTTTCC------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHhhcCCCeEEE-ECccccCC------
Confidence 46788999999999999999998754 6999999996 21 1 1578888 99988732
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
+++++||+|++..... ... ......++.++.++|+|||.+++..+
T Consensus 116 --~~~~~fD~v~~~~~l~-----~~~----~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 116 --FPENNFDLIYSRDAIL-----ALS----LENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp --CCTTCEEEEEEESCGG-----GSC----HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CCCCcEEEEeHHHHHH-----hcC----hHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 4578999999965431 111 13346788999999999999998764
No 35
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.44 E-value=2.7e-13 Score=115.76 Aligned_cols=124 Identities=16% Similarity=0.214 Sum_probs=86.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+++|.+|||+|||||+++..+++.++ +.++|+|+|+++ +. .+.++.++ .+|+.+..
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~--------~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~-~~D~~~~~---- 182 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMR--------NDGVIYAFDVDENRLRETRLNLSRLGVLNVILF-HSSSLHIG---- 182 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTT--------TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEE-SSCGGGGG----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--------CCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEE-ECChhhcc----
Confidence 46789999999999999999999874 457999999997 21 24567888 88877632
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCccc-----------HHHHHHHHHHHHHHHHHcccCCCEEEEeecCC---CChHHH
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMD-----------HDLITQLAIAVIRFAVTYSKPGADCLIKIWDG---RNRPQL 193 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d-----------~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~---~~~~~~ 193 (229)
..++.||+|++|++....|....+ ......+...++..+.++|||||.+++.+... .+...+
T Consensus 183 ----~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v 258 (315)
T 1ixk_A 183 ----ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVI 258 (315)
T ss_dssp ----GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHH
T ss_pred ----cccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHH
Confidence 124689999999876544432111 11223455688999999999999999865432 233334
Q ss_pred HHHHHh
Q psy1489 194 EESITR 199 (229)
Q Consensus 194 ~~~l~~ 199 (229)
...++.
T Consensus 259 ~~~l~~ 264 (315)
T 1ixk_A 259 QWALDN 264 (315)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 455554
No 36
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.44 E-value=1.5e-12 Score=108.75 Aligned_cols=142 Identities=17% Similarity=0.210 Sum_probs=97.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++ +. .++++.++ ++|+.+.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~---------~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~-~~d~~~~------ 171 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASER---------PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHIL-QSDWFSA------ 171 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHC---------TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEE-CCSTTGG------
T ss_pred cCCCEEEEecCCccHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEE-Ecchhhh------
Confidence 467899999999999999999875 567999999996 21 23468888 9998763
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCC---------cc-----cHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHH
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMR---------EM-----DHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLE 194 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~---------~~-----d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~ 194 (229)
+++++||+|+++++....+.. .. .....+.....++..+.++|+|||.+++.+ ......++.
T Consensus 172 ---~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~ 247 (276)
T 2b3t_A 172 ---LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH-GWQQGEAVR 247 (276)
T ss_dssp ---GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC-CSSCHHHHH
T ss_pred ---cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE-CchHHHHHH
Confidence 335689999998754221110 00 001112345678899999999999999864 333456677
Q ss_pred HHHHhh-CCeeEEEcCCCCCCCCceEEEEecc
Q psy1489 195 ESITRF-YSQVKILKPPSSRSHSAELFLLGRG 225 (229)
Q Consensus 195 ~~l~~~-F~~v~~~kp~~sr~~s~E~Y~v~~~ 225 (229)
+.++.. |..+.+.+.. ...+.+++++.
T Consensus 248 ~~l~~~Gf~~v~~~~d~----~g~~r~~~~~~ 275 (276)
T 2b3t_A 248 QAFILAGYHDVETCRDY----GDNERVTLGRY 275 (276)
T ss_dssp HHHHHTTCTTCCEEECT----TSSEEEEEEEC
T ss_pred HHHHHCCCcEEEEEecC----CCCCcEEEEEE
Confidence 777665 8778777653 33455666654
No 37
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.44 E-value=2.2e-13 Score=109.57 Aligned_cols=130 Identities=9% Similarity=0.042 Sum_probs=87.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++.. |..+|+|+|+++ + ..+.++.++ ++|+.+.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~---------p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~-~~d~~~~------ 103 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN---------PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLL-WVDGSDL------ 103 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEE-ECCSSCG------
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC---------CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEE-eCCHHHH------
Confidence 457899999999999999999875 567999999996 2 124678899 9998872
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeEEE
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVKIL 207 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~~~ 207 (229)
...++++.||+|+++.+.... . ..+....-....++..+.++|+|||.+++..........+.+.+... |..+.+.
T Consensus 104 ~~~~~~~~~D~i~~~~~~~~~--~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 104 TDYFEDGEIDRLYLNFSDPWP--K-KRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp GGTSCTTCCSEEEEESCCCCC--S-GGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HhhcCCCCCCEEEEECCCCcc--c-cchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeecc
Confidence 223556789999998642110 0 00100000124678889999999999998764322234555556554 6555554
Q ss_pred c
Q psy1489 208 K 208 (229)
Q Consensus 208 k 208 (229)
+
T Consensus 181 ~ 181 (214)
T 1yzh_A 181 L 181 (214)
T ss_dssp S
T ss_pred c
Confidence 3
No 38
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.44 E-value=1.1e-12 Score=118.07 Aligned_cols=124 Identities=18% Similarity=0.170 Sum_probs=87.3
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+|.+|||+|||||+.+..+++.++ +.++|+|+|+++ +. .+.++.++ .+|..+..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~--------~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~-~~D~~~~~------ 181 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN--------NEGAILANEFSASRVKVLHANISRCGISNVALT-HFDGRVFG------ 181 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT--------TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEE-CCCSTTHH------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCCHHHhh------
Confidence 789999999999999999999875 458999999997 21 24578888 89988732
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCc--------c---cHHHHHHHHHHHHHHHHHcccCCCEEEEeecC--C-CChHHHHH
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMRE--------M---DHDLITQLAIAVIRFAVTYSKPGADCLIKIWD--G-RNRPQLEE 195 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~--------~---d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~--~-~~~~~~~~ 195 (229)
. ..++.||+|++|+++...|... + +......++..+|..+.++|||||+++..+.+ . .+...+..
T Consensus 182 ~-~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~ 260 (479)
T 2frx_A 182 A-AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLW 260 (479)
T ss_dssp H-HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHH
T ss_pred h-hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHH
Confidence 1 1356899999998764433311 1 11223345668899999999999999986543 2 33333444
Q ss_pred HHHhh
Q psy1489 196 SITRF 200 (229)
Q Consensus 196 ~l~~~ 200 (229)
.+..+
T Consensus 261 ~l~~~ 265 (479)
T 2frx_A 261 LKETY 265 (479)
T ss_dssp HHHHS
T ss_pred HHHHC
Confidence 55543
No 39
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.43 E-value=1.1e-12 Score=105.33 Aligned_cols=168 Identities=15% Similarity=0.175 Sum_probs=103.9
Q ss_pred CcHHHHHHHhcCccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-
Q psy1489 29 ADPYVQKAKKENYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY- 106 (229)
Q Consensus 29 ~d~y~~~~~~~~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~- 106 (229)
++.|........+..+.......+...+. ..++.+|||+|||+|.++..+++. + .+|+|+|+++ +.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~----------~~v~~vD~s~~~~~ 88 (227)
T 3e8s_A 21 AQAWIDAVRHGAIESRRQVTDQAILLAIL-GRQPERVLDLGCGEGWLLRALADR-G----------IEAVGVDGDRTLVD 88 (227)
T ss_dssp HHHHHHHHHHTCCHHHHHTHHHHHHHHHH-HTCCSEEEEETCTTCHHHHHHHTT-T----------CEEEEEESCHHHHH
T ss_pred HHHHHHHhcccccccccccccHHHHHHhh-cCCCCEEEEeCCCCCHHHHHHHHC-C----------CEEEEEcCCHHHHH
Confidence 45555444443343333222222222332 235689999999999999998876 3 5899999997 21
Q ss_pred ---CCCCCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 107 ---PIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 107 ---~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
...++.+. .+|+.+... .....+.+||+|++..... ..+ ...++..+.++|+|||.+++.
T Consensus 89 ~a~~~~~~~~~-~~~~~~~~~----~~~~~~~~fD~v~~~~~l~---~~~---------~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 89 AARAAGAGEVH-LASYAQLAE----AKVPVGKDYDLICANFALL---HQD---------IIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp HHHHTCSSCEE-ECCHHHHHT----TCSCCCCCEEEEEEESCCC---SSC---------CHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHhcccccc-hhhHHhhcc----cccccCCCccEEEECchhh---hhh---------HHHHHHHHHHHhCCCeEEEEE
Confidence 12455666 666443100 0012345699999976543 111 236788899999999999987
Q ss_pred ecCC-------------------------------CChHHHHHHHHhh-CCeeEEEcCCCCCCC-CceEEEEecc
Q psy1489 184 IWDG-------------------------------RNRPQLEESITRF-YSQVKILKPPSSRSH-SAELFLLGRG 225 (229)
Q Consensus 184 ~~~~-------------------------------~~~~~~~~~l~~~-F~~v~~~kp~~sr~~-s~E~Y~v~~~ 225 (229)
.+.. ....++...+++. |..+.+..|...... ....++|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~k 226 (227)
T 3e8s_A 152 TLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAER 226 (227)
T ss_dssp ECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEEE
T ss_pred ecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEeec
Confidence 6421 1357788888776 877777766544432 3467777764
No 40
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.43 E-value=1.3e-12 Score=105.71 Aligned_cols=132 Identities=16% Similarity=0.148 Sum_probs=88.4
Q ss_pred cCCCCeeEeecCC-CCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAA-PGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcG-pG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~ 126 (229)
++++.+|||+||| +|.++..+++..+ .+|+|+|+++ +. .+ ++.++ .+|+....
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~----------~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~-~~d~~~~~--- 117 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFN----------CKVTATEVDEEFFEYARRNIERNNS-NVRLV-KSNGGIIK--- 117 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHC----------CEEEEEECCHHHHHHHHHHHHHTTC-CCEEE-ECSSCSST---
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcC----------CEEEEEECCHHHHHHHHHHHHHhCC-CcEEE-eCCchhhh---
Confidence 5688999999999 9999999998743 6999999997 21 12 68888 89965421
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHH--------HHHHHHHHHHHHHHHcccCCCEEEEeecCC-CChHHHHHHH
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHD--------LITQLAIAVIRFAVTYSKPGADCLIKIWDG-RNRPQLEESI 197 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~--------~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~-~~~~~~~~~l 197 (229)
.++++.||+|++|++....+....... ........++..+.++|+|||.+++.+... ....++.+.+
T Consensus 118 ----~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l 193 (230)
T 3evz_A 118 ----GVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERG 193 (230)
T ss_dssp ----TTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHH
T ss_pred ----hcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHH
Confidence 144678999999876422211100000 001223678899999999999999865444 3456777777
Q ss_pred HhhCCeeEEEcC
Q psy1489 198 TRFYSQVKILKP 209 (229)
Q Consensus 198 ~~~F~~v~~~kp 209 (229)
++....++..+.
T Consensus 194 ~~~g~~~~~~~~ 205 (230)
T 3evz_A 194 IKLGYSVKDIKF 205 (230)
T ss_dssp HHTTCEEEEEEE
T ss_pred HHcCCceEEEEe
Confidence 776445555544
No 41
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.43 E-value=9.2e-13 Score=117.00 Aligned_cols=125 Identities=23% Similarity=0.246 Sum_probs=88.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.++|.+|||+|||||+++..+++.. +.++|+|+|+++.. .+ .+.++ .+|+.+..
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~---------~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~-~~D~~~~~---- 308 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVA---------PEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVK-QGDGRYPS---- 308 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHC---------TTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEE-ECCTTCTH----
T ss_pred CCCcCeEEEECCCchHHHHHHHHHc---------CCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEE-eCchhhch----
Confidence 3578999999999999999999986 45899999999721 11 36778 89988742
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcc-----------cHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC---CChHHH
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREM-----------DHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG---RNRPQL 193 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~-----------d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~---~~~~~~ 193 (229)
..++++.||+|++|++....|.... +......++..++..+.++|||||.+++.+.+- .+...+
T Consensus 309 --~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v 386 (429)
T 1sqg_A 309 --QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQI 386 (429)
T ss_dssp --HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHH
T ss_pred --hhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHH
Confidence 2245678999999987654443111 122233455688999999999999999866432 333445
Q ss_pred HHHHHhh
Q psy1489 194 EESITRF 200 (229)
Q Consensus 194 ~~~l~~~ 200 (229)
...+..+
T Consensus 387 ~~~l~~~ 393 (429)
T 1sqg_A 387 KAFLQRT 393 (429)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 5566553
No 42
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.43 E-value=2.3e-13 Score=108.44 Aligned_cols=114 Identities=18% Similarity=0.200 Sum_probs=85.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++. +..+|+|+|+++ + ....++.++ .+|+.+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~----------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~------ 120 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL----------GAKSVLATDISDESMTAAEENAALNGIYDIALQ-KTSLLA------ 120 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEE-ESSTTT------
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEE-eccccc------
Confidence 457899999999999999998764 346999999997 2 123358888 999876
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeEE
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVKI 206 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~~ 206 (229)
..++.||+|+++... +....++..+.++|+|||.+++..+.......+...++.. |..+.+
T Consensus 121 ----~~~~~fD~i~~~~~~--------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 121 ----DVDGKFDLIVANILA--------------EILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp ----TCCSCEEEEEEESCH--------------HHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred ----cCCCCceEEEECCcH--------------HHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 235789999997632 1235778889999999999998766656667777777765 554443
Q ss_pred E
Q psy1489 207 L 207 (229)
Q Consensus 207 ~ 207 (229)
.
T Consensus 183 ~ 183 (205)
T 3grz_A 183 M 183 (205)
T ss_dssp E
T ss_pred e
Confidence 3
No 43
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=5.1e-14 Score=117.86 Aligned_cols=135 Identities=12% Similarity=0.034 Sum_probs=98.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++.. +.++|+|+|+++ + ..+.++.++ .+|+.+..
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~---------~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~-~~d~~~~~---- 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYS---------KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPI-LADNRDVE---- 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT---------CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEE-ESCGGGCC----
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEE-ECChHHcC----
Confidence 5688999999999999999999875 457999999996 2 134567888 89877620
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC-----CChHHHHHHHHhh-C
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG-----RNRPQLEESITRF-Y 201 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~-----~~~~~~~~~l~~~-F 201 (229)
. ++.||+|++|++. + ....+..+.+.|+|||.+++..+.. ....+.++.+... .
T Consensus 183 ----~-~~~~D~Vi~d~p~---~------------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~ 242 (272)
T 3a27_A 183 ----L-KDVADRVIMGYVH---K------------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNG 242 (272)
T ss_dssp ----C-TTCEEEEEECCCS---S------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTT
T ss_pred ----c-cCCceEEEECCcc---c------------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhC
Confidence 1 4579999998753 1 1246677889999999999877654 2234555556554 3
Q ss_pred CeeEEEcCCCCCCCCceEEEEeccCC
Q psy1489 202 SQVKILKPPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 202 ~~v~~~kp~~sr~~s~E~Y~v~~~~~ 227 (229)
..+++......|.-+...|.+|..|+
T Consensus 243 ~~~~~~~~~~v~~~~p~~~~~~~d~~ 268 (272)
T 3a27_A 243 YKLIDYEVRKIKKYAPGVWHVVVDAK 268 (272)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CeeEEeEEEEEEEECCCCCEEEEEEE
Confidence 56666666667777777888887664
No 44
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.43 E-value=3.5e-13 Score=108.63 Aligned_cols=128 Identities=9% Similarity=0.072 Sum_probs=85.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++.. |...|+|+|+++ + ..++++.++ ++|+.+ +
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~---------p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~-~~d~~~------l 100 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN---------PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLL-NIDADT------L 100 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEE-CCCGGG------H
T ss_pred CCCceEEEEecCCCHHHHHHHHHC---------CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEE-eCCHHH------H
Confidence 357899999999999999999875 568999999996 2 134678899 999876 3
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeEE
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVKI 206 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~~ 206 (229)
...++++.||.|+++.+..... . .+....-....++..+.++|+|||.|++.+........+.+.+... |..+.+
T Consensus 101 ~~~~~~~~~d~v~~~~~~p~~~--~-~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 101 TDVFEPGEVKRVYLNFSDPWPK--K-RHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp HHHCCTTSCCEEEEESCCCCCS--G-GGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HhhcCcCCcCEEEEECCCCCcC--c-cccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccccc
Confidence 3346678899999865321100 0 0000000124678889999999999998764322234445555554 444443
No 45
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.42 E-value=3.7e-13 Score=110.18 Aligned_cols=157 Identities=14% Similarity=0.205 Sum_probs=97.8
Q ss_pred CccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCCC-----CCCeE
Q psy1489 40 NYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYPI-----DGAVV 113 (229)
Q Consensus 40 ~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~~-----~~~~~ 113 (229)
.|.+|+.+|+..+...+....++.+|||+|||||.++..+++. + ..+|+|+|+++ |... +.+..
T Consensus 16 ~yvsrg~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g---------~~~V~gvDis~~ml~~a~~~~~~~~~ 85 (232)
T 3opn_A 16 RYVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-G---------AKLVYALDVGTNQLAWKIRSDERVVV 85 (232)
T ss_dssp CSSSTTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T---------CSEEEEECSSCCCCCHHHHTCTTEEE
T ss_pred CccCCcHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-C---------CCEEEEEcCCHHHHHHHHHhCccccc
Confidence 6999999999998888876667889999999999999999876 2 35999999998 4221 22222
Q ss_pred EecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee---cCCC--
Q psy1489 114 LSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI---WDGR-- 188 (229)
Q Consensus 114 ~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~---~~~~-- 188 (229)
....++.... ...++...||.+.+|..... . ..++.++.++|||||.|++.+ |...
T Consensus 86 ~~~~~~~~~~-----~~~~~~~~~d~~~~D~v~~~-----l---------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~ 146 (232)
T 3opn_A 86 MEQFNFRNAV-----LADFEQGRPSFTSIDVSFIS-----L---------DLILPPLYEILEKNGEVAALIKPQFEAGRE 146 (232)
T ss_dssp ECSCCGGGCC-----GGGCCSCCCSEEEECCSSSC-----G---------GGTHHHHHHHSCTTCEEEEEECHHHHSCHH
T ss_pred cccceEEEeC-----HhHcCcCCCCEEEEEEEhhh-----H---------HHHHHHHHHhccCCCEEEEEECcccccCHH
Confidence 1012221100 01122223677777664311 1 467889999999999998853 1100
Q ss_pred ----------------ChHHHHHHHHhh-CCeeEEE-cCCCCCCCCceEEEEecc
Q psy1489 189 ----------------NRPQLEESITRF-YSQVKIL-KPPSSRSHSAELFLLGRG 225 (229)
Q Consensus 189 ----------------~~~~~~~~l~~~-F~~v~~~-kp~~sr~~s~E~Y~v~~~ 225 (229)
...++...+.+. |..+.+. .|......+.|..+-+++
T Consensus 147 ~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g~~gn~e~l~~~~~ 201 (232)
T 3opn_A 147 QVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAGNVEFLVHLLK 201 (232)
T ss_dssp HHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCBTTTBCCEEEEEEE
T ss_pred HhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCCCCCCHHHHHHHhh
Confidence 123444555554 6544443 244455567776665544
No 46
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.42 E-value=3.7e-13 Score=110.76 Aligned_cols=115 Identities=19% Similarity=0.335 Sum_probs=87.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCC-CeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDG-AVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~-~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++.++ +.++|+++|+++ +. .+++ +.++ .+|+.+.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~---- 157 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVG--------PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIK-LKDIYEG---- 157 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEE-CSCGGGC----
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhC--------CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEE-ECchhhc----
Confidence 46789999999999999999999865 678999999996 21 2344 7888 8887652
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh---CCe
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF---YSQ 203 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~---F~~ 203 (229)
++++.||+|++|.+. ...++..+.++|+|||.+++.........++.+.++.. |..
T Consensus 158 -----~~~~~~D~v~~~~~~----------------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~ 216 (255)
T 3mb5_A 158 -----IEEENVDHVILDLPQ----------------PERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMK 216 (255)
T ss_dssp -----CCCCSEEEEEECSSC----------------GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSC
T ss_pred -----cCCCCcCEEEECCCC----------------HHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 556789999997642 12467789999999999998665544556677777665 777
Q ss_pred eEEE
Q psy1489 204 VKIL 207 (229)
Q Consensus 204 v~~~ 207 (229)
+.++
T Consensus 217 ~~~~ 220 (255)
T 3mb5_A 217 PRTI 220 (255)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 7665
No 47
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.42 E-value=7.4e-13 Score=110.81 Aligned_cols=135 Identities=14% Similarity=0.207 Sum_probs=84.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.++|.+|||+|||||+++..+++.++ ..++|+|+|+++ + ..+.++.++ .+|+.+....
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~--------~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~-~~D~~~~~~~-- 149 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMK--------NKGTIVAVEISKTRTKALKSNINRMGVLNTIII-NADMRKYKDY-- 149 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTT--------TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE-ESCHHHHHHH--
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcC--------CCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEE-eCChHhcchh--
Confidence 46789999999999999999999864 347999999996 1 123467888 8876542110
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHH-------HHHHHHHHHHHHHHHcccCCCEEEEeecCC--CChHHHH-HHH
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHD-------LITQLAIAVIRFAVTYSKPGADCLIKIWDG--RNRPQLE-ESI 197 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~-------~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~--~~~~~~~-~~l 197 (229)
+. ..++.||+|++|++....|....+.. ........++..+.++|||||.+++.+... .+..+.+ +.+
T Consensus 150 ~~--~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l 227 (274)
T 3ajd_A 150 LL--KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYIL 227 (274)
T ss_dssp HH--HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHH
T ss_pred hh--hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHH
Confidence 00 12568999999987654443211100 011234578899999999999999865432 2333444 444
Q ss_pred HhhCCeeEEE
Q psy1489 198 TRFYSQVKIL 207 (229)
Q Consensus 198 ~~~F~~v~~~ 207 (229)
+. +..+++.
T Consensus 228 ~~-~~~~~~~ 236 (274)
T 3ajd_A 228 QK-RNDVELI 236 (274)
T ss_dssp HH-CSSEEEE
T ss_pred Hh-CCCcEEe
Confidence 44 3344444
No 48
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.42 E-value=8.2e-13 Score=105.81 Aligned_cols=106 Identities=13% Similarity=0.106 Sum_probs=81.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++. + ++|+|+|+++ + ..++ ++.++ .+|+.+.
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~-~----------~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~-~~d~~~~---- 116 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA-G----------GRAITIEPRADRIENIQKNIDTYGLSPRMRAV-QGTAPAA---- 116 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ESCTTGG----
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-C----------CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEE-eCchhhh----
Confidence 467899999999999999999886 4 6999999997 2 1234 68888 9998762
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF 200 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~ 200 (229)
......||+|+++... + .. ++..+.++|+|||.+++.........++.+.++..
T Consensus 117 ----~~~~~~~D~v~~~~~~--------~-------~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 117 ----LADLPLPEAVFIGGGG--------S-------QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp ----GTTSCCCSEEEECSCC--------C-------HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred ----cccCCCCCEEEECCcc--------c-------HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 1123479999997632 1 23 67889999999999999877666667777777776
No 49
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.42 E-value=4.1e-13 Score=110.03 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=87.9
Q ss_pred CCCeeEeecCCCCchHHHHHHH---HhccCCCCCCCCcEEEEEeCCC-CCC-----CCCCeEEecCCCCChhHHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKL---VNSHGYDSKQPKGLVLSVDKLP-IYP-----IDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~---~~~~~~~~~~~~~~v~gvD~~~-~~~-----~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
++.+|||||||+|.++..+++. ++ +.++|+|||+++ |.. ..+++++ ++|+.+... ...
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~--------~~~~V~gvD~s~~~l~~a~~~~~~v~~~-~gD~~~~~~----l~~ 147 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMG--------IDCQVIGIDRDLSRCQIPASDMENITLH-QGDCSDLTT----FEH 147 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTT--------CCCEEEEEESCCTTCCCCGGGCTTEEEE-ECCSSCSGG----GGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcC--------CCCEEEEEeCChHHHHHHhccCCceEEE-ECcchhHHH----HHh
Confidence 4689999999999999999987 34 568999999998 322 2468899 999887421 012
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHH-cccCCCEEEEeec----CCCChHHHHHHHHhhCCeeEE
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVT-YSKPGADCLIKIW----DGRNRPQLEESITRFYSQVKI 206 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~-~LkpgG~~v~~~~----~~~~~~~~~~~l~~~F~~v~~ 206 (229)
+.+.+||+|++|+.. . + ...++.++.+ +|+|||.|++..+ ...+...+.+.++..=..+.+
T Consensus 148 ~~~~~fD~I~~d~~~------~-~-------~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 148 LREMAHPLIFIDNAH------A-N-------TFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp GSSSCSSEEEEESSC------S-S-------HHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred hccCCCCEEEECCch------H-h-------HHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 334479999998742 1 1 2357788887 9999999998532 122233455555543113444
Q ss_pred EcCCCCC-CCCceEEEEecc
Q psy1489 207 LKPPSSR-SHSAELFLLGRG 225 (229)
Q Consensus 207 ~kp~~sr-~~s~E~Y~v~~~ 225 (229)
.+....+ ....+.|+....
T Consensus 214 ~~~~~~~~~~~~~g~~~~~~ 233 (236)
T 2bm8_A 214 DMLYANASSQLDRGVLRRVA 233 (236)
T ss_dssp ETTTTTSCTTTTTCEEEECC
T ss_pred cchhhcccccccchHhhhcc
Confidence 3322111 233455665544
No 50
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.42 E-value=5.4e-13 Score=119.29 Aligned_cols=131 Identities=19% Similarity=0.201 Sum_probs=88.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.++|.+|||+|||||+++..++++++ +.++|+|+|+++ +. .+. +.++ .+|..+
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~--------~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~-~~Da~~------ 162 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMG--------GKGLLLANEVDGKRVRGLLENVERWGAP-LAVT-QAPPRA------ 162 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTT--------TCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEE-CSCHHH------
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEE-ECCHHH------
Confidence 46789999999999999999999875 457999999997 21 234 7777 777554
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCc----------c-cHHHHHHHHHHHHHHHHHcccCCCEEEEeecC---CCChHHH
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMRE----------M-DHDLITQLAIAVIRFAVTYSKPGADCLIKIWD---GRNRPQL 193 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~----------~-d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~---~~~~~~~ 193 (229)
+...+ ++.||+|++|+++...|... . +......++..+|..+.++|||||.|+..+.+ ..+...+
T Consensus 163 l~~~~-~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv 241 (464)
T 3m6w_A 163 LAEAF-GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVV 241 (464)
T ss_dssp HHHHH-CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHH
T ss_pred hhhhc-cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHH
Confidence 22222 56899999999865444311 1 12233445678999999999999999975533 2333334
Q ss_pred HHHHHhhCCeeEEE
Q psy1489 194 EESITRFYSQVKIL 207 (229)
Q Consensus 194 ~~~l~~~F~~v~~~ 207 (229)
...++. +..+++.
T Consensus 242 ~~~l~~-~~~~~l~ 254 (464)
T 3m6w_A 242 AHFLKA-HPEFRLE 254 (464)
T ss_dssp HHHHHH-CTTEEEE
T ss_pred HHHHHH-CCCcEEE
Confidence 444544 3334443
No 51
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.42 E-value=4.9e-13 Score=119.47 Aligned_cols=127 Identities=23% Similarity=0.246 Sum_probs=89.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+++|.+|||+|||||+++..+++.++ ..++|+|+|+++ + ..+.++.++ .+|+.+..
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~--------~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~-~~D~~~~~---- 323 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMK--------NKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPL-VKDARKAP---- 323 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTT--------TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEE-CSCTTCCS----
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcC--------CCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEE-EcChhhcc----
Confidence 46789999999999999999999874 347999999996 1 134578888 89987631
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCc-----------ccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC---CChHHH
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMRE-----------MDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG---RNRPQL 193 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~-----------~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~---~~~~~~ 193 (229)
..++++.||+|++|+++...|... .+......++..++..+.++|||||.+++.+... .+...+
T Consensus 324 --~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v 401 (450)
T 2yxl_A 324 --EIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNI 401 (450)
T ss_dssp --SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHH
T ss_pred --hhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHH
Confidence 113346899999998865554311 1222333455688999999999999999765443 233444
Q ss_pred HHHHHhh
Q psy1489 194 EESITRF 200 (229)
Q Consensus 194 ~~~l~~~ 200 (229)
...+..+
T Consensus 402 ~~~l~~~ 408 (450)
T 2yxl_A 402 RWFLNVH 408 (450)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 5556654
No 52
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.41 E-value=2.5e-13 Score=110.61 Aligned_cols=116 Identities=28% Similarity=0.328 Sum_probs=81.7
Q ss_pred cchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----C----CCCCCe
Q psy1489 42 RCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----Y----PIDGAV 112 (229)
Q Consensus 42 ~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----~----~~~~~~ 112 (229)
+++....+....+.+. ++++.+|||+|||+|.++..+++..+ +.++|+|+|+++ + . ..+++.
T Consensus 59 ~~~~~~~~~~~l~~~~-~~~~~~vLDlG~G~G~~~~~la~~~g--------~~~~v~gvD~s~~~i~~~~~~a~~~~~v~ 129 (233)
T 2ipx_A 59 RSKLAAAILGGVDQIH-IKPGAKVLYLGAASGTTVSHVSDIVG--------PDGLVYAVEFSHRSGRDLINLAKKRTNII 129 (233)
T ss_dssp TCHHHHHHHTTCSCCC-CCTTCEEEEECCTTSHHHHHHHHHHC--------TTCEEEEECCCHHHHHHHHHHHHHCTTEE
T ss_pred chhHHHHHHhHHheec-CCCCCEEEEEcccCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHhhccCCeE
Confidence 4444444443223333 46789999999999999999999875 567999999995 1 1 126788
Q ss_pred EEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 113 VLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 113 ~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
++ .+|+.+.... ...++.||+|++|++. .+. ...++..+.++|+|||.+++.+.
T Consensus 130 ~~-~~d~~~~~~~-----~~~~~~~D~V~~~~~~-------~~~------~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 130 PV-IEDARHPHKY-----RMLIAMVDVIFADVAQ-------PDQ------TRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp EE-CSCTTCGGGG-----GGGCCCEEEEEECCCC-------TTH------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EE-EcccCChhhh-----cccCCcEEEEEEcCCC-------ccH------HHHHHHHHHHHcCCCeEEEEEEc
Confidence 88 9999874211 1235689999997641 111 23456779999999999998654
No 53
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=1.3e-12 Score=102.37 Aligned_cols=139 Identities=16% Similarity=0.099 Sum_probs=96.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-----CCCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-----YPIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-----~~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
++++.+|||+|||+|.++..+++. + .+|+|+|+++ + ...+++.++ .+|+.+.. +
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~----------~~v~~~D~~~~~~~~a~~~~~~~~~~-~~d~~~~~--------~ 103 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-G----------HDVLGTDLDPILIDYAKQDFPEARWV-VGDLSVDQ--------I 103 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHCTTSEEE-ECCTTTSC--------C
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-C----------CcEEEEcCCHHHHHHHHHhCCCCcEE-EcccccCC--------C
Confidence 467899999999999999998875 3 5899999997 2 124568888 89987632 4
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC--CChHHHHHHHHhh-CCeeEEEcC
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG--RNRPQLEESITRF-YSQVKILKP 209 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~--~~~~~~~~~l~~~-F~~v~~~kp 209 (229)
+++.||+|++++.. .+... ......++..+.++|+|||.+++..... ....++...+... |..+.....
T Consensus 104 ~~~~~D~i~~~~~~----~~~~~----~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 104 SETDFDLIVSAGNV----MGFLA----EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp CCCCEEEEEECCCC----GGGSC----HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred CCCceeEEEECCcH----HhhcC----hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 46789999996321 11111 1224578888999999999999876554 3567788888776 776666655
Q ss_pred CCCCC---CCceEEEEecc
Q psy1489 210 PSSRS---HSAELFLLGRG 225 (229)
Q Consensus 210 ~~sr~---~s~E~Y~v~~~ 225 (229)
...++ .+.-.++|+++
T Consensus 176 ~~~~~~~~~~~~~~~v~~k 194 (195)
T 3cgg_A 176 WDLKPFVQGSEFLVAVFTK 194 (195)
T ss_dssp TTCCBCCTTCSEEEEEEEE
T ss_pred cccCcCCCCCcEEEEEEec
Confidence 33332 34445555543
No 54
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.40 E-value=6.3e-13 Score=103.05 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=80.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++.. +..+|+|+|+++ + ...+ ++ ++ .+|..+.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~-~~d~~~~---- 87 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRST---------PQTTAVCFEISEERRERILSNAINLGVSDRI-AV-QQGAPRA---- 87 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTS---------SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EE-ECCTTGG----
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHC---------CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EE-ecchHhh----
Confidence 4678899999999999999998875 457999999997 2 1233 56 67 7776542
Q ss_pred HHHHHhCC--CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhC
Q psy1489 127 RLVTILKD--DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFY 201 (229)
Q Consensus 127 ~i~~~~~~--~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F 201 (229)
++. +.||+|+++..... ..++..+.++|+|||.+++..+.......+...++...
T Consensus 88 -----~~~~~~~~D~i~~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 88 -----FDDVPDNPDVIFIGGGLTA---------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFG 144 (178)
T ss_dssp -----GGGCCSCCSEEEECC-TTC---------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred -----hhccCCCCCEEEECCcccH---------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcC
Confidence 223 78999999765311 35678899999999999987776655666777776664
No 55
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.40 E-value=4.3e-13 Score=117.39 Aligned_cols=128 Identities=20% Similarity=0.222 Sum_probs=90.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----C-----------C--CCCeEEecCCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----P-----------I--DGAVVLSKCDF 119 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~-----------~--~~~~~~~~~D~ 119 (229)
..++.+|||+|||+|.++..+++..+ +.++|+|+|+++ +. . . +++.++ .+|+
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~--------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~-~~d~ 151 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVG--------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFL-KGFI 151 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHT--------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEE-ESCT
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEE-EccH
Confidence 35789999999999999999999875 567999999996 21 1 1 578899 9999
Q ss_pred CChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC------------
Q psy1489 120 TQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG------------ 187 (229)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~------------ 187 (229)
.+..... ...+++++||+|+++...... .+ ...++.++.++|||||.|++..+..
T Consensus 152 ~~l~~~~--~~~~~~~~fD~V~~~~~l~~~----~d-------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 218 (383)
T 4fsd_A 152 ENLATAE--PEGVPDSSVDIVISNCVCNLS----TN-------KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDP 218 (383)
T ss_dssp TCGGGCB--SCCCCTTCEEEEEEESCGGGC----SC-------HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCH
T ss_pred HHhhhcc--cCCCCCCCEEEEEEccchhcC----CC-------HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhH
Confidence 8731000 002557899999997754211 11 2478899999999999999864321
Q ss_pred ----------CChHHHHHHHHhh-CCeeEEEc
Q psy1489 188 ----------RNRPQLEESITRF-YSQVKILK 208 (229)
Q Consensus 188 ----------~~~~~~~~~l~~~-F~~v~~~k 208 (229)
....++...+++. |..+.+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 219 ILYGECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred HHhhcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 1236677777776 77665544
No 56
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.40 E-value=2.5e-13 Score=108.64 Aligned_cols=138 Identities=18% Similarity=0.130 Sum_probs=93.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC----CCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP----IDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~----~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++ +.. ..++.+. .+|+.+. -.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~-~~d~~~~---------~~ 99 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA-G----------FDVDATDGSPELAAEASRRLGRPVR-TMLFHQL---------DA 99 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHTSCCE-ECCGGGC---------CC
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc-C----------CeEEEECCCHHHHHHHHHhcCCceE-EeeeccC---------CC
Confidence 567899999999999999998875 2 5999999997 211 1155666 7776652 14
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC--------------CChHHHHHHHHh
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG--------------RNRPQLEESITR 199 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~--------------~~~~~~~~~l~~ 199 (229)
++.||+|++..... ... .+....++..+.++|+|||.+++..... ....++...+++
T Consensus 100 ~~~fD~v~~~~~l~-----~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (211)
T 3e23_A 100 IDAYDAVWAHACLL-----HVP----RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAE 170 (211)
T ss_dssp CSCEEEEEECSCGG-----GSC----HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHH
T ss_pred CCcEEEEEecCchh-----hcC----HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHh
Confidence 67899999966431 111 1234578899999999999999876432 246778888877
Q ss_pred h--CCeeEEEcCCCCCC-CCceEEEEeccC
Q psy1489 200 F--YSQVKILKPPSSRS-HSAELFLLGRGF 226 (229)
Q Consensus 200 ~--F~~v~~~kp~~sr~-~s~E~Y~v~~~~ 226 (229)
. |..+.+........ ...+.++.+.+.
T Consensus 171 aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~ 200 (211)
T 3e23_A 171 AGTWASVAVESSEGKGFDQELAQFLHVSVR 200 (211)
T ss_dssp HCCCSEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCCcEEEEEEeccCCCCCCCCceEEEEEEe
Confidence 5 87777665333222 334445544443
No 57
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.40 E-value=5.5e-13 Score=112.49 Aligned_cols=119 Identities=18% Similarity=0.228 Sum_probs=82.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
++++++|||+|||||+++..++.+. +.++|+|+|+++ |. .+.+++++ ++|+.+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~---------~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v-~gDa~~------ 183 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHV---------YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVI-TGDETV------ 183 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHT---------TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEE-ESCGGG------
T ss_pred CCCcCEEEEECCCccHHHHHHHHHc---------cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEE-ECchhh------
Confidence 6789999999999999886655443 457999999997 21 23578888 998776
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCC---hHHHHHHHHhhCCee
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRN---RPQLEESITRFYSQV 204 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~---~~~~~~~l~~~F~~v 204 (229)
++++.||+|+++... .+ ...+++++.++|||||+|++....+.. ...+......-|...
T Consensus 184 ----l~d~~FDvV~~~a~~-------~d-------~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~gf~~~ 245 (298)
T 3fpf_A 184 ----IDGLEFDVLMVAALA-------EP-------KRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDITGFRRA 245 (298)
T ss_dssp ----GGGCCCSEEEECTTC-------SC-------HHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGTTEEEE
T ss_pred ----CCCCCcCEEEECCCc-------cC-------HHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhhhhhhe
Confidence 336789999986531 11 346889999999999999987643211 001111233358777
Q ss_pred EEEcCCC
Q psy1489 205 KILKPPS 211 (229)
Q Consensus 205 ~~~kp~~ 211 (229)
..+-|..
T Consensus 246 ~~~~p~~ 252 (298)
T 3fpf_A 246 GVVLPSG 252 (298)
T ss_dssp EEECCCT
T ss_pred eEECCCC
Confidence 7777744
No 58
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.40 E-value=3.5e-13 Score=110.03 Aligned_cols=124 Identities=18% Similarity=0.185 Sum_probs=84.2
Q ss_pred CccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--CCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 57 KFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--PIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 57 ~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
..++++.+|||+|||+|.++..+++. + .+|+|+|+++ +. ....+.++ .+|+.+ ....++
T Consensus 37 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~gvD~s~~~~~~a~~~~~~~-~~d~~~------~~~~~~ 98 (240)
T 3dli_A 37 PYFKGCRRVLDIGCGRGEFLELCKEE-G----------IESIGVDINEDMIKFCEGKFNVV-KSDAIE------YLKSLP 98 (240)
T ss_dssp GGTTTCSCEEEETCTTTHHHHHHHHH-T----------CCEEEECSCHHHHHHHHTTSEEE-CSCHHH------HHHTSC
T ss_pred hhhcCCCeEEEEeCCCCHHHHHHHhC-C----------CcEEEEECCHHHHHHHHhhccee-eccHHH------HhhhcC
Confidence 34567899999999999999998876 3 4799999997 21 11237777 777544 222356
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC------------------ChHHHHH
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR------------------NRPQLEE 195 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~------------------~~~~~~~ 195 (229)
+++||+|++...... ... .....++.++.++|||||.+++.+.... ...++..
T Consensus 99 ~~~fD~i~~~~~l~~-----~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 169 (240)
T 3dli_A 99 DKYLDGVMISHFVEH-----LDP----ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKF 169 (240)
T ss_dssp TTCBSEEEEESCGGG-----SCG----GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHH
T ss_pred CCCeeEEEECCchhh-----CCc----HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHH
Confidence 789999999654311 110 1235788899999999999998775432 2345666
Q ss_pred HHHhh-CCeeEEE
Q psy1489 196 SITRF-YSQVKIL 207 (229)
Q Consensus 196 ~l~~~-F~~v~~~ 207 (229)
.++.. |..+.+.
T Consensus 170 ~l~~aGf~~~~~~ 182 (240)
T 3dli_A 170 ILEYLGFRDVKIE 182 (240)
T ss_dssp HHHHHTCEEEEEE
T ss_pred HHHHCCCeEEEEE
Confidence 66665 6555444
No 59
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.40 E-value=7.1e-13 Score=110.75 Aligned_cols=116 Identities=19% Similarity=0.316 Sum_probs=85.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------C-CCCCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------Y-PIDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~-~~~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++.++ +.++|+|+|+++ + . ..+++.+. .+|+.+.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~-~~d~~~~---- 174 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALN--------GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTS-RSDIADF---- 174 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHT--------TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEE-CSCTTTC----
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE-ECchhcc----
Confidence 46789999999999999999998854 567999999986 1 1 23568888 8988762
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeE
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVK 205 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~ 205 (229)
++++.||+|+++++. ...++..+.++|+|||.+++..........+.+.++.. |..+.
T Consensus 175 -----~~~~~fD~Vi~~~~~----------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 175 -----ISDQMYDAVIADIPD----------------PWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp -----CCSCCEEEEEECCSC----------------GGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEE
T ss_pred -----CcCCCccEEEEcCcC----------------HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 456789999996531 12567889999999999998765433445566666554 65555
Q ss_pred EEc
Q psy1489 206 ILK 208 (229)
Q Consensus 206 ~~k 208 (229)
+..
T Consensus 234 ~~~ 236 (275)
T 1yb2_A 234 TVE 236 (275)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 60
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.39 E-value=2.7e-13 Score=112.66 Aligned_cols=147 Identities=17% Similarity=0.148 Sum_probs=90.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC--------CC---------------------
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP--------ID--------------------- 109 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~--------~~--------------------- 109 (229)
.+|.+|||||||+|.++..++.. ...+|+|+|+|+ |.. .+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~----------~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~ 123 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACD----------SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGR 123 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGG----------TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGG
T ss_pred CCCceEEEeCCCccHHHHHHHHh----------hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcc
Confidence 46889999999999888776643 224799999996 211 00
Q ss_pred ----------CCe-EEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHH-HHHHHHHHHHHHHHHcccCC
Q psy1489 110 ----------GAV-VLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHD-LITQLAIAVIRFAVTYSKPG 177 (229)
Q Consensus 110 ----------~~~-~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~-~~~~~~~~~l~~~~~~Lkpg 177 (229)
++. ++ ++|+.+.... ......+||+|++.... .+. ........++.++.++||||
T Consensus 124 ~~~~~~~~~~~i~~~~-~~D~~~~~~~----~~~~~~~fD~V~~~~~l--------~~i~~~~~~~~~~l~~i~r~LKPG 190 (263)
T 2a14_A 124 WEEKEEKLRAAVKRVL-KCDVHLGNPL----APAVLPLADCVLTLLAM--------ECACCSLDAYRAALCNLASLLKPG 190 (263)
T ss_dssp HHHHHHHHHHHEEEEE-ECCTTSSSTT----TTCCCCCEEEEEEESCH--------HHHCSSHHHHHHHHHHHHTTEEEE
T ss_pred hhhHHHHHHhhhheEE-eccccCCCCC----CccccCCCCEeeehHHH--------HHhcCCHHHHHHHHHHHHHHcCCC
Confidence 111 56 7777762100 00124689999997643 110 01233457899999999999
Q ss_pred CEEEEeecCC---------------CChHHHHHHHHhh-CCeeEEEcCCCCC----C-CCceEEEEeccCCCC
Q psy1489 178 ADCLIKIWDG---------------RNRPQLEESITRF-YSQVKILKPPSSR----S-HSAELFLLGRGFKGK 229 (229)
Q Consensus 178 G~~v~~~~~~---------------~~~~~~~~~l~~~-F~~v~~~kp~~sr----~-~s~E~Y~v~~~~~~~ 229 (229)
|.|++..... ....++...+... |..+.+..+...- . ...-.|++|++.+++
T Consensus 191 G~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~ 263 (263)
T 2a14_A 191 GHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKPGP 263 (263)
T ss_dssp EEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC--
T ss_pred cEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEecCCC
Confidence 9999875221 1356778888776 7766665542111 1 124457788876653
No 61
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.39 E-value=5.8e-13 Score=103.58 Aligned_cols=124 Identities=15% Similarity=0.069 Sum_probs=84.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-CCCCCCeEEecCCCCChhHHHHHHHHhCCCCc
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-YPIDGAVVLSKCDFTQPDIQDRLVTILKDDKL 137 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~ 137 (229)
.++.+|||+|||+|.++..++++ . +|+|+|+++ | ...+++.++ ++|+.+. +++++|
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~----------~--~v~gvD~s~~~~~~~~~~~~~-~~d~~~~---------~~~~~f 79 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR----------N--TVVSTDLNIRALESHRGGNLV-RADLLCS---------INQESV 79 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT----------S--EEEEEESCHHHHHTCSSSCEE-ECSTTTT---------BCGGGC
T ss_pred CCCCeEEEeccCccHHHHHHHhc----------C--cEEEEECCHHHHhcccCCeEE-ECChhhh---------cccCCC
Confidence 35779999999999999998764 2 999999998 2 225578888 9998763 345789
Q ss_pred cEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeEEEc
Q psy1489 138 DVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVKILK 208 (229)
Q Consensus 138 D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~~~k 208 (229)
|+|+++++......... ...-......+..+.+.| |||.+++.........++...++.. |..+.+.+
T Consensus 80 D~i~~n~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 80 DVVVFNPPYVPDTDDPI--IGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp SEEEECCCCBTTCCCTT--TBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEECCCCccCCcccc--ccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEe
Confidence 99999876422111100 000000123455666677 9999998776666778888888775 65555554
No 62
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.39 E-value=1.2e-12 Score=104.12 Aligned_cols=129 Identities=10% Similarity=0.088 Sum_probs=85.3
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
++.+|||+|||+|.++..++... +..+|+|+|+++ + ..++++.++ .+|+.+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~------- 127 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR---------PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPV-QSRVEEF------- 127 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEE-ECCTTTS-------
T ss_pred CCCeEEEECCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEE-ecchhhC-------
Confidence 47899999999999999999875 567999999997 2 123458888 8998763
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhCCeeEEEcC
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFYSQVKILKP 209 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F~~v~~~kp 209 (229)
.+.++||+|+++... + ...++..+.++|+|||.+++.... ....++.+.+. -|..+.+...
T Consensus 128 --~~~~~~D~i~~~~~~---------~------~~~~l~~~~~~L~~gG~l~~~~~~-~~~~~~~~~~~-g~~~~~~~~~ 188 (207)
T 1jsx_A 128 --PSEPPFDGVISRAFA---------S------LNDMVSWCHHLPGEQGRFYALKGQ-MPEDEIALLPE-EYQVESVVKL 188 (207)
T ss_dssp --CCCSCEEEEECSCSS---------S------HHHHHHHHTTSEEEEEEEEEEESS-CCHHHHHTSCT-TEEEEEEEEE
T ss_pred --CccCCcCEEEEeccC---------C------HHHHHHHHHHhcCCCcEEEEEeCC-CchHHHHHHhc-CCceeeeeee
Confidence 234689999985421 1 246788899999999999986432 23334433333 3544443222
Q ss_pred CCCCCCCceEEEEecc
Q psy1489 210 PSSRSHSAELFLLGRG 225 (229)
Q Consensus 210 ~~sr~~s~E~Y~v~~~ 225 (229)
.....+....++++++
T Consensus 189 ~~~~~~~~~~~~~~~k 204 (207)
T 1jsx_A 189 QVPALDGERHLVVIKA 204 (207)
T ss_dssp ECC--CCEEEEEEEEE
T ss_pred ccCCCCCceEEEEEEe
Confidence 2233344555566554
No 63
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.39 E-value=1.1e-12 Score=106.38 Aligned_cols=102 Identities=16% Similarity=0.165 Sum_probs=75.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
..++.+|||+|||+|.++..+++.. +..+|+|+|+++ + ....++.++ .+|+.+..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~d~~~~~------ 105 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY---------PEATFTLVDMSEKMLEIAKNRFRGNLKVKYI-EADYSKYD------ 105 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHTCSCTTEEEE-ESCTTTCC------
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHhhccCCCEEEE-eCchhccC------
Confidence 4578999999999999999999875 567999999997 2 112368888 99988732
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR 188 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~ 188 (229)
+ .+.||+|++.... +..+. .....+++++.++|+|||.+++..+...
T Consensus 106 --~-~~~fD~v~~~~~l-----~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 106 --F-EEKYDMVVSALSI-----HHLED----EDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp --C-CSCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred --C-CCCceEEEEeCcc-----ccCCH----HHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 2 3789999997643 11111 1224678999999999999998765543
No 64
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.39 E-value=6.6e-13 Score=104.62 Aligned_cols=101 Identities=22% Similarity=0.202 Sum_probs=73.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..++.. +..+|+|+|+++ +. .+.+++++ ++|+.+.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~------ 105 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR----------GAASVLFVESDQRSAAVIARNIEALGLSGATLR-RGAVAAV------ 105 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT----------TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEE-ESCHHHH------
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC----------CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEE-EccHHHH------
Confidence 46889999999999999987764 346899999997 21 23568888 8886552
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHH--cccCCCEEEEeecCC
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVT--YSKPGADCLIKIWDG 187 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~--~LkpgG~~v~~~~~~ 187 (229)
...+++++||+|++|.+.. +. ......++..+.+ +|+|||.+++.....
T Consensus 106 ~~~~~~~~fD~i~~~~p~~----~~------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 106 VAAGTTSPVDLVLADPPYN----VD------SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp HHHCCSSCCSEEEECCCTT----SC------HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred HhhccCCCccEEEECCCCC----cc------hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 2224467899999987531 10 1234567777888 999999999976543
No 65
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.38 E-value=1.7e-12 Score=107.25 Aligned_cols=96 Identities=14% Similarity=0.086 Sum_probs=72.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
++++.+|||+|||+|.++..+++.. .+|+|+|+++ +. ..+++.++ .+|+.+.. +
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~-~~d~~~~~--------~ 107 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSF-----------GTVEGLELSADMLAIARRRNPDAVLH-HGDMRDFS--------L 107 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTS-----------SEEEEEESCHHHHHHHHHHCTTSEEE-ECCTTTCC--------C
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcC-----------CeEEEEECCHHHHHHHHhhCCCCEEE-ECChHHCC--------c
Confidence 3567899999999999999988652 4899999997 21 24578899 99988732 2
Q ss_pred CCCCccEEEeCC-CCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDM-APNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~-~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
++.||+|++.. .. .+....+....++..+.++|+|||.|++.
T Consensus 108 -~~~fD~v~~~~~~l--------~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 108 -GRRFSAVTCMFSSI--------GHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp -SCCEEEEEECTTGG--------GGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred -cCCcCEEEEcCchh--------hhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 57899999965 22 12212234567889999999999999985
No 66
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.37 E-value=3e-13 Score=108.14 Aligned_cols=96 Identities=11% Similarity=0.019 Sum_probs=69.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-------C---------------CCCCeEEe
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-------P---------------IDGAVVLS 115 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-------~---------------~~~~~~~~ 115 (229)
+.++.+|||+|||+|..+..++++ + .+|+|+|+|+ |. . ..+++++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~-g----------~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~- 87 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ-G----------YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW- 87 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH-C----------CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE-
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC-C----------CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE-
Confidence 357889999999999999999986 3 5999999997 31 1 2468888
Q ss_pred cCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 116 KCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 116 ~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
++|+.+..... .++||+|++..... .... .....++.++.++|||||.+++
T Consensus 88 ~~d~~~l~~~~-------~~~fD~v~~~~~l~-----~l~~----~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 88 CGDFFALTARD-------IGHCAAFYDRAAMI-----ALPA----DMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp EECCSSSTHHH-------HHSEEEEEEESCGG-----GSCH----HHHHHHHHHHHHHSCSEEEEEE
T ss_pred ECccccCCccc-------CCCEEEEEECcchh-----hCCH----HHHHHHHHHHHHHcCCCcEEEE
Confidence 99998853110 15799999865431 1111 2345678999999999998443
No 67
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.37 E-value=1.9e-12 Score=113.17 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=78.2
Q ss_pred CCCCeeEeecCC------CCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-CCCCCeEEecCCCCChhHHHHHHHH
Q psy1489 60 RPGLKVLDCGAA------PGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-PIDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 60 ~~g~~VLDlGcG------pG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-~~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
.++.+||||||| +|+.+..+++... |.++|+|+|+++ |. ..++++++ ++|+.+......+...
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f--------P~a~V~GVDiSp~m~~~~~rI~fv-~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFF--------PRGQIYGLDIMDKSHVDELRIRTI-QGDQNDAEFLDRIARR 285 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHC--------TTCEEEEEESSCCGGGCBTTEEEE-ECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhC--------CCCEEEEEECCHHHhhcCCCcEEE-Eecccccchhhhhhcc
Confidence 356899999999 8888888887654 678999999998 32 23578999 9999997654433321
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+++||+|++|+.. .. ......|.++.++|||||.|++..
T Consensus 286 --d~sFDlVisdgsH------~~------~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 286 --YGPFDIVIDDGSH------IN------AHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp --HCCEEEEEECSCC------CH------HHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred --cCCccEEEECCcc------cc------hhHHHHHHHHHHhcCCCeEEEEEe
Confidence 4689999998642 11 224578999999999999999864
No 68
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.37 E-value=9e-13 Score=108.23 Aligned_cols=94 Identities=17% Similarity=0.111 Sum_probs=71.2
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------CCCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------YPIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------~~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
++.+|||+|||+|.++..+++.. ..+|+|+|+++ + ....++.++ .+|+.+.. +
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~d~~~~~--------~ 104 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG----------AKKVLGIDLSERMLTEAKRKTTSPVVCYE-QKAIEDIA--------I 104 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT----------CSEEEEEESCHHHHHHHHHHCCCTTEEEE-ECCGGGCC--------C
T ss_pred CCCEEEEECCCCCHHHHHHHHcC----------CCEEEEEECCHHHHHHHHHhhccCCeEEE-EcchhhCC--------C
Confidence 68899999999999999988763 23999999996 2 123567888 88876521 4
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
++++||+|++...... . .....+++.+.++|+|||.+++.+
T Consensus 105 ~~~~fD~v~~~~~l~~-----~------~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 105 EPDAYNVVLSSLALHY-----I------ASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp CTTCEEEEEEESCGGG-----C------SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCeEEEEEchhhhh-----h------hhHHHHHHHHHHHcCCCcEEEEEe
Confidence 4689999999664311 1 123578899999999999999864
No 69
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.37 E-value=2.2e-13 Score=110.39 Aligned_cols=122 Identities=13% Similarity=0.060 Sum_probs=81.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||||||+|.++..+++.. +...|+|||+++ + ..+.++.++ .+|+.+. +
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~---------p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~-~~Da~~~-----l 97 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR---------PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVM-CHDAVEV-----L 97 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEE-CSCHHHH-----H
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC---------CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEE-ECCHHHH-----H
Confidence 367899999999999999999875 667999999996 2 134678888 8886542 3
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHh
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITR 199 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~ 199 (229)
...++++.||.|++..+..... ..+..........+..+.++|||||.|++.+........+.+.+..
T Consensus 98 ~~~~~~~~~d~v~~~~~~p~~~---~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 98 HKMIPDNSLRMVQLFFPDPWHK---ARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp HHHSCTTCEEEEEEESCCCCCS---GGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHcCCCChheEEEeCCCCccc---hhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 3346788999999975421111 0010000001247888999999999999876433223444555544
No 70
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.37 E-value=7.9e-13 Score=109.48 Aligned_cols=118 Identities=12% Similarity=0.017 Sum_probs=82.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------CC--------------------CCCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------YP--------------------IDGA 111 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------~~--------------------~~~~ 111 (229)
.++.+|||+|||+|..+..|++. | .+|+|||+|+ | .. ..++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G----------~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-G----------HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI 135 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-T----------CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-C----------CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCce
Confidence 47889999999999999999875 3 5999999997 2 11 1457
Q ss_pred eEEecCCCCChhHHHHHHHHhC-CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC----
Q psy1489 112 VVLSKCDFTQPDIQDRLVTILK-DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD---- 186 (229)
Q Consensus 112 ~~~~~~D~~~~~~~~~i~~~~~-~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~---- 186 (229)
.++ ++|+.+.. .. .++||+|++.+.... ++. ......+..+.++|||||.|++..+.
T Consensus 136 ~~~-~~D~~~l~--------~~~~~~FD~V~~~~~l~~--l~~-------~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~ 197 (252)
T 2gb4_A 136 SLY-CCSIFDLP--------RANIGKFDRIWDRGALVA--INP-------GDHDRYADIILSLLRKEFQYLVAVLSYDPT 197 (252)
T ss_dssp EEE-ESCTTTGG--------GGCCCCEEEEEESSSTTT--SCG-------GGHHHHHHHHHHTEEEEEEEEEEEEECCTT
T ss_pred EEE-ECccccCC--------cccCCCEEEEEEhhhhhh--CCH-------HHHHHHHHHHHHHcCCCeEEEEEEEecCCc
Confidence 888 99998842 22 278999998765422 111 12346788899999999999643321
Q ss_pred ---C----CChHHHHHHHHhhCCeeEE
Q psy1489 187 ---G----RNRPQLEESITRFYSQVKI 206 (229)
Q Consensus 187 ---~----~~~~~~~~~l~~~F~~v~~ 206 (229)
+ ....++...+...|..+.+
T Consensus 198 ~~~g~~~~~~~~el~~~l~~~f~v~~~ 224 (252)
T 2gb4_A 198 KHAGPPFYVPSAELKRLFGTKCSMQCL 224 (252)
T ss_dssp SCCCSSCCCCHHHHHHHHTTTEEEEEE
T ss_pred cCCCCCCCCCHHHHHHHhhCCeEEEEE
Confidence 1 1346777777665654433
No 71
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.37 E-value=9.2e-13 Score=105.32 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=76.5
Q ss_pred hcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C------CCCCCCeEEecCCCCChhHHHH
Q psy1489 55 KIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 55 ~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.+..+.++.+|||+|||+|.++..+++. + .+|+|+|+++ + ...+++.++ .+|+.+.
T Consensus 40 ~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~----------~~v~~~D~s~~~~~~a~~~~~~~~~~~-~~d~~~~----- 102 (218)
T 3ou2_A 40 RLRAGNIRGDVLELASGTGYWTRHLSGL-A----------DRVTALDGSAEMIAEAGRHGLDNVEFR-QQDLFDW----- 102 (218)
T ss_dssp HHTTTTSCSEEEEESCTTSHHHHHHHHH-S----------SEEEEEESCHHHHHHHGGGCCTTEEEE-ECCTTSC-----
T ss_pred HHhcCCCCCeEEEECCCCCHHHHHHHhc-C----------CeEEEEeCCHHHHHHHHhcCCCCeEEE-ecccccC-----
Confidence 3333567789999999999999999887 3 5999999997 2 123578888 9998772
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
+++++||+|++.... +.... .....++..+.++|+|||.+++..+.
T Consensus 103 ----~~~~~~D~v~~~~~l-----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 103 ----TPDRQWDAVFFAHWL-----AHVPD----DRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp ----CCSSCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCCceeEEEEechh-----hcCCH----HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 457899999996643 11111 22457889999999999999987553
No 72
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.37 E-value=4.8e-12 Score=102.36 Aligned_cols=98 Identities=28% Similarity=0.366 Sum_probs=73.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++..+++..+ +.++|+|+|+++ + ...+++.++ .+|+.+....
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~-~~d~~~~~~~---- 137 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVG--------WEGKIFGIEFSPRVLRELVPIVEERRNIVPI-LGDATKPEEY---- 137 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHSSCTTEEEE-ECCTTCGGGG----
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhC--------CCeEEEEEECCHHHHHHHHHHHhccCCCEEE-EccCCCcchh----
Confidence 45789999999999999999999875 557999999997 1 123578888 9998874211
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+ ++.||+|++|.+. .+. ....+..+.++|+|||.+++.
T Consensus 138 ~~~-~~~~D~v~~~~~~-------~~~------~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 138 RAL-VPKVDVIFEDVAQ-------PTQ------AKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp TTT-CCCEEEEEECCCS-------TTH------HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcc-cCCceEEEECCCC-------HhH------HHHHHHHHHHhcCCCCEEEEE
Confidence 012 3589999998741 111 224478899999999999886
No 73
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.36 E-value=8.2e-12 Score=102.22 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=86.9
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.++.+|||+|||+|.++..+++... .+|+|+|+++ +. ...++.++ .+|+.+..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~d~~~~~------- 153 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY----------ATTDLLEPVKHMLEEAKRELAGMPVGKFI-LASMETAT------- 153 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC----------SEEEEEESCHHHHHHHHHHTTTSSEEEEE-ESCGGGCC-------
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc----------CEEEEEeCCHHHHHHHHHHhccCCceEEE-EccHHHCC-------
Confidence 4688999999999999999988742 5899999986 21 11457788 88876521
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC---------------CChHHHHH
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG---------------RNRPQLEE 195 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~---------------~~~~~~~~ 195 (229)
++++.||+|++.... +.... .....++..+.++|+|||.+++..... ....++..
T Consensus 154 -~~~~~fD~v~~~~~l-----~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (254)
T 1xtp_A 154 -LPPNTYDLIVIQWTA-----IYLTD----ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKR 223 (254)
T ss_dssp -CCSSCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHH
T ss_pred -CCCCCeEEEEEcchh-----hhCCH----HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHH
Confidence 456789999996542 11111 234678899999999999999876311 12467777
Q ss_pred HHHhh-CCeeEEEcC
Q psy1489 196 SITRF-YSQVKILKP 209 (229)
Q Consensus 196 ~l~~~-F~~v~~~kp 209 (229)
.+++. |..+.+...
T Consensus 224 ~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 224 LFNESGVRVVKEAFQ 238 (254)
T ss_dssp HHHHHTCCEEEEEEC
T ss_pred HHHHCCCEEEEeeec
Confidence 78766 887776654
No 74
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.36 E-value=1.5e-12 Score=104.44 Aligned_cols=95 Identities=13% Similarity=0.153 Sum_probs=71.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CC-CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PI-DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~-~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
.++.+|||+|||+|.++..+++. + .+|+|+|+++ +. .. .++.++ .+|+.+.. +
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~d~~~~~--------~ 103 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA-G----------RTVYGIEPSREMRMIAKEKLPKEFSIT-EGDFLSFE--------V 103 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT-T----------CEEEEECSCHHHHHHHHHHSCTTCCEE-SCCSSSCC--------C
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC-C----------CeEEEEeCCHHHHHHHHHhCCCceEEE-eCChhhcC--------C
Confidence 47889999999999999998876 2 5999999997 21 12 378888 99988732 3
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+ ++||+|++.... +.... .....++.++.++|||||.+++..
T Consensus 104 ~-~~fD~v~~~~~l-----~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 104 P-TSIDTIVSTYAF-----HHLTD----DEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp C-SCCSEEEEESCG-----GGSCH----HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred C-CCeEEEEECcch-----hcCCh----HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3 789999997643 11111 112357889999999999999875
No 75
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.36 E-value=1.7e-12 Score=108.90 Aligned_cols=113 Identities=16% Similarity=0.083 Sum_probs=82.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~~ 126 (229)
+++|.+|||+|||+|.++..+++.. . .+|+|+|+++ + ..+. .++++ .+|+.+.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~---------~-~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~-~~D~~~~---- 187 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG---------K-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAY-NMDNRDF---- 187 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT---------C-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE-CSCTTTC----
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC---------C-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEE-ECCHHHh----
Confidence 4678999999999999999999874 2 2799999997 2 1233 37788 9998873
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC------CChHHHHHHHHhh
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG------RNRPQLEESITRF 200 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~------~~~~~~~~~l~~~ 200 (229)
..++.||+|++|.+... ...+..+.++|+|||.+++..+.. .....+.+.+...
T Consensus 188 -----~~~~~fD~Vi~~~p~~~---------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 188 -----PGENIADRILMGYVVRT---------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp -----CCCSCEEEEEECCCSSG---------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred -----cccCCccEEEECCchhH---------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 22678999999875311 246677899999999999866542 3356666666665
Q ss_pred CCeeEE
Q psy1489 201 YSQVKI 206 (229)
Q Consensus 201 F~~v~~ 206 (229)
...+..
T Consensus 248 G~~~~~ 253 (278)
T 2frn_A 248 GYDVEK 253 (278)
T ss_dssp TCEEEE
T ss_pred CCeeEE
Confidence 444554
No 76
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.36 E-value=5.2e-12 Score=103.71 Aligned_cols=95 Identities=17% Similarity=0.215 Sum_probs=73.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC-CCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~-~~~~~~~~D~~~~~~~~ 126 (229)
++++.+|||+|||+|.++..+++..+ ++|+|+|+++ +. .+. ++.++ .+|+.+..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~--- 109 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVK----------GQITGIDLFPDFIEIFNENAVKANCADRVKGI-TGSMDNLP--- 109 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCC----------SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ECCTTSCS---
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCC----------CeEEEEECCHHHHHHHHHHHHHcCCCCceEEE-ECChhhCC---
Confidence 56788999999999999999998752 4999999997 21 122 38888 99987632
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+++++||+|++...... .+ ...++..+.++|+|||.+++..
T Consensus 110 -----~~~~~fD~v~~~~~l~~-----~~-------~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 110 -----FQNEELDLIWSEGAIYN-----IG-------FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp -----SCTTCEEEEEEESCSCC-----CC-------HHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CCCCCEEEEEecChHhh-----cC-------HHHHHHHHHHHcCCCcEEEEEE
Confidence 45689999999765421 12 2467889999999999999875
No 77
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.35 E-value=6.4e-13 Score=109.66 Aligned_cols=95 Identities=19% Similarity=0.210 Sum_probs=72.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
..++.+|||+|||+|.++..+++.. ++|+|+|+++ |. ..+++.+. .+|+.+..
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~-----------~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~-~~d~~~l~---- 98 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFV-----------KKVVAFDLTEDILKVARAFIEGNGHQQVEYV-QGDAEQMP---- 98 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGS-----------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEE-ECCC-CCC----
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-----------CEEEEEeCCHHHHHHHHHHHHhcCCCceEEE-EecHHhCC----
Confidence 3578999999999999999988763 4999999997 31 23568888 99987732
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
++++.||+|++..... +..+ ...++.++.++|||||.|++..
T Consensus 99 ----~~~~~fD~V~~~~~l~----~~~d-------~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 99 ----FTDERFHIVTCRIAAH----HFPN-------PASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp ----SCTTCEEEEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCCCEEEEEEhhhhH----hcCC-------HHHHHHHHHHHcCCCCEEEEEE
Confidence 5568999999976431 1112 2467889999999999999854
No 78
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.35 E-value=2.5e-12 Score=105.25 Aligned_cols=94 Identities=14% Similarity=0.035 Sum_probs=69.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..++... +.++|+|+|+++ |. .+++++++ ++|+.+...
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~~---- 134 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF---------PHLHVTIVDSLNKRITFLEKLSEALQLENTTFC-HDRAETFGQ---- 134 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEE-ESCHHHHTT----
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEE-eccHHHhcc----
Confidence 467899999999999999999754 567999999997 21 24568888 887644110
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
....+++||+|+++... + ...++..+.++|+|||.|++.
T Consensus 135 -~~~~~~~fD~V~~~~~~--------~-------~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 135 -RKDVRESYDIVTARAVA--------R-------LSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp -CTTTTTCEEEEEEECCS--------C-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred -cccccCCccEEEEeccC--------C-------HHHHHHHHHHhcCCCCEEEEE
Confidence 00014689999996521 1 346788899999999999874
No 79
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.35 E-value=2.4e-12 Score=108.67 Aligned_cols=106 Identities=18% Similarity=0.095 Sum_probs=75.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC-CCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~-~~~~~~~~D~~~~~~~~ 126 (229)
++++.+|||+|||+|.++..+++..+ .+|+|+|+++ +. .++ ++.+. .+|+.+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~----- 133 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD----------VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVR-IQGWEE----- 133 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC----------CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEE-ECCGGG-----
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC----------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE-ECCHHH-----
Confidence 46889999999999999999998863 6999999997 21 222 57788 888765
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR 188 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~ 188 (229)
+ ++.||+|++.........+.. .........++..+.++|||||.+++..+...
T Consensus 134 -----~-~~~fD~v~~~~~~~~~~d~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 134 -----F-DEPVDRIVSLGAFEHFADGAG--DAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp -----C-CCCCSEEEEESCGGGTTCCSS--CCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred -----c-CCCccEEEEcchHHhcCcccc--ccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 3 678999999765321100000 00001235788899999999999998776433
No 80
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=1.7e-13 Score=112.30 Aligned_cols=102 Identities=17% Similarity=0.125 Sum_probs=72.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------CCCCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
..+|.+|||||||+|..+..+++..+ .+|+|||+++ |. .-.++.++ .+|+.+ +
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~----------~~v~~id~~~~~~~~a~~~~~~~~~~~~~~-~~~a~~------~ 120 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI----------DEHWIIECNDGVFQRLRDWAPRQTHKVIPL-KGLWED------V 120 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE----------EEEEEEECCHHHHHHHHHHGGGCSSEEEEE-ESCHHH------H
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC----------cEEEEEeCCHHHHHHHHHHHhhCCCceEEE-eehHHh------h
Confidence 36799999999999999998876532 5899999997 21 12245566 666443 2
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
...+++++||.|+.|..+... ..........++.++.++|||||.|++.
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~------~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSE------ETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBG------GGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccccccCCceEEEeeeeccc------chhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 234677899999998754221 1122234567889999999999999763
No 81
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.34 E-value=3.9e-12 Score=101.85 Aligned_cols=121 Identities=12% Similarity=0.057 Sum_probs=84.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
..++.+|||+|||+|.++..+++.. .+|+|+|+++ + ....++.++ .+|+.+.
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~d~~~~------- 109 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC-----------KRLTVIDVMPRAIGRACQRTKRWSHISWA-ATDILQF------- 109 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE-----------EEEEEEESCHHHHHHHHHHTTTCSSEEEE-ECCTTTC-------
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC-----------CEEEEEECCHHHHHHHHHhcccCCCeEEE-EcchhhC-------
Confidence 3567899999999999999988763 4899999996 2 123468888 9998873
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec--------C-CCChHHHHHHHHhh
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW--------D-GRNRPQLEESITRF 200 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~--------~-~~~~~~~~~~l~~~ 200 (229)
.++++||+|++..... +.........++..+.++|+|||.+++... . ......+...+...
T Consensus 110 --~~~~~fD~v~~~~~l~--------~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (216)
T 3ofk_A 110 --STAELFDLIVVAEVLY--------YLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEA 179 (216)
T ss_dssp --CCSCCEEEEEEESCGG--------GSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHH
T ss_pred --CCCCCccEEEEccHHH--------hCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhh
Confidence 1467899999965431 111112345778999999999999998642 2 22344555666666
Q ss_pred CCeeEEEc
Q psy1489 201 YSQVKILK 208 (229)
Q Consensus 201 F~~v~~~k 208 (229)
+..++.+.
T Consensus 180 ~~~~e~~~ 187 (216)
T 3ofk_A 180 LTEVERVQ 187 (216)
T ss_dssp SEEEEEEE
T ss_pred ccceEEEe
Confidence 66655443
No 82
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.33 E-value=9.5e-12 Score=105.25 Aligned_cols=141 Identities=12% Similarity=0.052 Sum_probs=92.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-C---------------CCCCCeEEecCCCCChh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-Y---------------PIDGAVVLSKCDFTQPD 123 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~---------------~~~~~~~~~~~D~~~~~ 123 (229)
++..+|||||||+|+++..+++.. +..+|++||+++. . ..++++++ .+|..+.
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~-~~D~~~~- 150 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK---------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV-IDDGVNF- 150 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT---------TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEE-CSCSCC--
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEE-EChHHHH-
Confidence 356899999999999999988763 4579999999982 0 12468888 9998762
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC----CCChHHHHHHHHh
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD----GRNRPQLEESITR 199 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~----~~~~~~~~~~l~~ 199 (229)
+. ..+++||+|++|.+... +.. .. -.....++.+.+.|+|||.|++.... ......+...++.
T Consensus 151 ----l~--~~~~~fDvIi~D~~~p~-~~~--~~----l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~ 217 (294)
T 3adn_A 151 ----VN--QTSQTFDVIISDCTDPI-GPG--ES----LFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSH 217 (294)
T ss_dssp --------CCCCCEEEEEECC-----------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHH
T ss_pred ----Hh--hcCCCccEEEECCCCcc-Ccc--hh----ccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHH
Confidence 11 13578999999875311 100 00 00146788899999999999987522 2235667788888
Q ss_pred hCCeeEEEcC-CCCCCCCceEEEEec
Q psy1489 200 FYSQVKILKP-PSSRSHSAELFLLGR 224 (229)
Q Consensus 200 ~F~~v~~~kp-~~sr~~s~E~Y~v~~ 224 (229)
.|..+..+.. ..+-++..-.|++|-
T Consensus 218 ~F~~v~~~~~~vp~~p~g~~~f~~as 243 (294)
T 3adn_A 218 YFSDVGFYQAAIPTYYGGIMTFAWAT 243 (294)
T ss_dssp HCSEEEEEEEECTTSSSSEEEEEEEE
T ss_pred HCCCeEEEEEEecccCCCceEEEEEe
Confidence 8988876542 222233344566654
No 83
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.33 E-value=8.3e-13 Score=108.23 Aligned_cols=122 Identities=9% Similarity=0.025 Sum_probs=79.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------------CCCCCCeEEecCCCCCh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------------YPIDGAVVLSKCDFTQP 122 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------------~~~~~~~~~~~~D~~~~ 122 (229)
.++.+|||||||+|.++..+++.. +...|+|+|+++ | ....++.++ ++|+.+.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~---------p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~-~~d~~~~ 114 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF---------PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACL-RSNAMKH 114 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS---------TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEE-ECCTTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC---------CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEE-ECcHHHh
Confidence 467899999999999999998865 567999999996 2 124578899 9998762
Q ss_pred hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHh
Q psy1489 123 DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITR 199 (229)
Q Consensus 123 ~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~ 199 (229)
+...++++.||.|++..+..... ..+.........++..+.++|+|||.|++.+........+.+.+..
T Consensus 115 -----l~~~~~~~~~D~v~~~~~dp~~k---~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~ 183 (235)
T 3ckk_A 115 -----LPNFFYKGQLTKMFFLFPDPHFK---RTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEE 183 (235)
T ss_dssp -----HHHHCCTTCEEEEEEESCC--------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred -----hhhhCCCcCeeEEEEeCCCchhh---hhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 23346678999999865321000 0010000011367889999999999999866432222334444444
No 84
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.33 E-value=1.6e-11 Score=106.22 Aligned_cols=107 Identities=21% Similarity=0.209 Sum_probs=79.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.+++.+|||+|||+|.++..++...+ +..+|+|+|+++ + ..+.++++. ++|+.+..
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~--------~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~-~~D~~~~~---- 267 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLG--------PTSPVYAGDLDEKRLGLAREAALASGLSWIRFL-RADARHLP---- 267 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHC--------TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEE-ECCGGGGG----
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhC--------CCceEEEEECCHHHHHHHHHHHHHcCCCceEEE-eCChhhCc----
Confidence 45788999999999999999998864 457999999997 2 123368888 99987732
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
.+...||+|++|++. |.+..+......+...++..+.++|+|||.+++...
T Consensus 268 ----~~~~~~D~Ii~npPy---g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 268 ----RFFPEVDRILANPPH---GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp ----GTCCCCSEEEECCCS---CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ----cccCCCCEEEECCCC---cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 234568999999875 333222233445567889999999999999998654
No 85
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.33 E-value=2.5e-12 Score=102.62 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=70.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
+++ +|||+|||+|.++..+++.. ..+|+|+|+++ +. .+ .++.++ .+|+.+..
T Consensus 43 ~~~-~vLdiG~G~G~~~~~l~~~~----------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~---- 106 (219)
T 3dlc_A 43 TAG-TCIDIGSGPGALSIALAKQS----------DFSIRALDFSKHMNEIALKNIADANLNDRIQIV-QGDVHNIP---- 106 (219)
T ss_dssp CEE-EEEEETCTTSHHHHHHHHHS----------EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ECBTTBCS----
T ss_pred CCC-EEEEECCCCCHHHHHHHHcC----------CCeEEEEECCHHHHHHHHHHHHhccccCceEEE-EcCHHHCC----
Confidence 344 99999999999999999872 36999999986 21 12 367888 89987732
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+++++||+|++...... . .....++.++.++|+|||.+++..
T Consensus 107 ----~~~~~~D~v~~~~~l~~-----~------~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 107 ----IEDNYADLIVSRGSVFF-----W------EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp ----SCTTCEEEEEEESCGGG-----C------SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCcccccEEEECchHhh-----c------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 45678999999764311 1 123468889999999999998853
No 86
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.32 E-value=1.7e-12 Score=106.55 Aligned_cols=95 Identities=18% Similarity=0.126 Sum_probs=72.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++ |. .+ .++.+. .+|+.+..
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~----------~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~-~~d~~~~~--- 99 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHG----------ITGTGIDMSSLFTAQAKRRAEELGVSERVHFI-HNDAAGYV--- 99 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTC----------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ESCCTTCC---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcC----------CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEE-ECChHhCC---
Confidence 56889999999999999999998753 5899999997 21 12 368888 99988731
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+ ++.||+|++...... . .....++.++.++|||||.+++..
T Consensus 100 -----~-~~~fD~V~~~~~~~~-----~------~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 100 -----A-NEKCDVAACVGATWI-----A------GGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp -----C-SSCEEEEEEESCGGG-----T------SSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred -----c-CCCCCEEEECCChHh-----c------CCHHHHHHHHHHHcCCCeEEEEec
Confidence 2 578999999554311 1 013567899999999999999854
No 87
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.32 E-value=3.1e-12 Score=103.28 Aligned_cols=114 Identities=19% Similarity=0.158 Sum_probs=79.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++ +. .+ .+++++ .+|+.+.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~----- 122 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQ--------PGARLLTMEINPDCAAITQQMLNFAGLQDKVTIL-NGASQDL----- 122 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSC--------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE-ESCHHHH-----
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC--------CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEE-ECCHHHH-----
Confidence 4678999999999999999998653 467999999997 21 12 247888 8885431
Q ss_pred HHHHhC----CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh
Q psy1489 128 LVTILK----DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF 200 (229)
Q Consensus 128 i~~~~~----~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~ 200 (229)
+ ..+. .++||+|++|... .+. ......+..+ ++|+|||.+++.........++.+.++..
T Consensus 123 l-~~~~~~~~~~~fD~V~~d~~~--------~~~---~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 186 (221)
T 3u81_A 123 I-PQLKKKYDVDTLDMVFLDHWK--------DRY---LPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGS 186 (221)
T ss_dssp G-GGTTTTSCCCCCSEEEECSCG--------GGH---HHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHC
T ss_pred H-HHHHHhcCCCceEEEEEcCCc--------ccc---hHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhC
Confidence 1 1122 2689999998742 111 1122445555 99999999998765555667777777664
No 88
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.32 E-value=7.3e-12 Score=106.63 Aligned_cols=126 Identities=16% Similarity=0.197 Sum_probs=83.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+++|.+|||+|||||+++.++++.++ +.++|+|+|+++ + ..+.+++++ .+|+.+...
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~--------~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~-~~D~~~~~~--- 167 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLK--------NQGKIFAFDLDAKRLASMATLLARAGVSCCELA-EEDFLAVSP--- 167 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHT--------TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE-ECCGGGSCT---
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEE-eCChHhcCc---
Confidence 46789999999999999999999875 568999999996 1 134568888 888765210
Q ss_pred HHHHhC-CCCccEEEeCCCCCCCCCCcc-------------cHHHHHHHHHHHHHHHHHcccCCCEEEEeecC---CCCh
Q psy1489 128 LVTILK-DDKLDVVLSDMAPNATGMREM-------------DHDLITQLAIAVIRFAVTYSKPGADCLIKIWD---GRNR 190 (229)
Q Consensus 128 i~~~~~-~~~~D~V~sd~~~~~~g~~~~-------------d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~---~~~~ 190 (229)
... ...||.|++|++....|.... +......++..+|..+.++|+ ||.++..+.+ .++.
T Consensus 168 ---~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene 243 (309)
T 2b9e_A 168 ---SDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENE 243 (309)
T ss_dssp ---TCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTH
T ss_pred ---cccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhH
Confidence 000 146999999998766555211 112233455678889999887 9988865433 2344
Q ss_pred HHHHHHHHhh
Q psy1489 191 PQLEESITRF 200 (229)
Q Consensus 191 ~~~~~~l~~~ 200 (229)
..+.+.+.++
T Consensus 244 ~~v~~~l~~~ 253 (309)
T 2b9e_A 244 DVVRDALQQN 253 (309)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHHhC
Confidence 4455556554
No 89
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=3.1e-12 Score=105.84 Aligned_cols=96 Identities=17% Similarity=0.134 Sum_probs=72.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----CCCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----YPIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----~~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
..++.+|||+|||+|.++..+++. ..+|+|+|+++ | ....++.++ .+|+.+.. ++
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~-~~d~~~~~--------~~ 91 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQ-----------GLFVYAVEPSIVMRQQAVVHPQVEWF-TGYAENLA--------LP 91 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTT-----------TCEEEEECSCHHHHHSSCCCTTEEEE-CCCTTSCC--------SC
T ss_pred CCCCCEEEEEcCcccHHHHHHHhC-----------CCEEEEEeCCHHHHHHHHhccCCEEE-ECchhhCC--------CC
Confidence 357899999999999999998862 36999999997 2 122378888 99987732 45
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
+++||+|++..... .. .....++.++.++|| ||.+++..+.
T Consensus 92 ~~~fD~v~~~~~l~-----~~------~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 92 DKSVDGVISILAIH-----HF------SHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TTCBSEEEEESCGG-----GC------SSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCEeEEEEcchHh-----hc------cCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 68999999976431 11 123578899999999 9988776544
No 90
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.32 E-value=6e-12 Score=101.57 Aligned_cols=139 Identities=14% Similarity=0.099 Sum_probs=93.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-------C---C-----CCCeEEecCCCCCh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-------P---I-----DGAVVLSKCDFTQP 122 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-------~---~-----~~~~~~~~~D~~~~ 122 (229)
++++.+|||+|||+|.++..+++. + .+|+|+|+++ +. . + .++.+. .+|+.+.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~d~~~~ 95 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-G----------YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFK-VENASSL 95 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEE-ECCTTSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-C----------CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEE-Eeccccc
Confidence 457899999999999999998876 3 5999999986 21 1 1 135777 8888763
Q ss_pred hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC---------------
Q psy1489 123 DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG--------------- 187 (229)
Q Consensus 123 ~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~--------------- 187 (229)
. ++++.||+|++..... +..+. .....+++.+.++|+|||.+++..+..
T Consensus 96 ~--------~~~~~~D~v~~~~~l~----~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~ 159 (235)
T 3sm3_A 96 S--------FHDSSFDFAVMQAFLT----SVPDP----KERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDF 159 (235)
T ss_dssp C--------SCTTCEEEEEEESCGG----GCCCH----HHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHH
T ss_pred C--------CCCCceeEEEEcchhh----cCCCH----HHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhc
Confidence 2 4567899999965431 11111 223468889999999999999865421
Q ss_pred -------------------------CChHHHHHHHHhh-CCeeEEEcC---CCCCCCCceEEEEecc
Q psy1489 188 -------------------------RNRPQLEESITRF-YSQVKILKP---PSSRSHSAELFLLGRG 225 (229)
Q Consensus 188 -------------------------~~~~~~~~~l~~~-F~~v~~~kp---~~sr~~s~E~Y~v~~~ 225 (229)
....++.+.+++. |..+.+..+ ........++|+.+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~g~~~~~~~i~~~~ 226 (235)
T 3sm3_A 160 PITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKILGFVIIAQK 226 (235)
T ss_dssp HHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred cchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEecceeeccCCccceEEEeeHH
Confidence 2356677777665 665555442 2333456666776644
No 91
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=6.4e-12 Score=102.63 Aligned_cols=105 Identities=8% Similarity=-0.006 Sum_probs=76.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------CCCCCCeEEecCCCCChhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------YPIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------~~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++ + ....++.++ ++|+.+......+..
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~d~~~~~~~~~~~~ 121 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF-----------PRVIGLDVSKSALEIAAKENTAANISYR-LLDGLVPEQAAQIHS 121 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS-----------SCEEEEESCHHHHHHHHHHSCCTTEEEE-ECCTTCHHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC-----------CCEEEEECCHHHHHHHHHhCcccCceEE-ECccccccccccccc
Confidence 5678999999999999999999874 3899999997 2 123478899 999998654332221
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
+..||+|+++...... +. .....++..+.++|+|||.+++..+..
T Consensus 122 ---~~~~d~v~~~~~~~~~-----~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 122 ---EIGDANIYMRTGFHHI-----PV----EKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp ---HHCSCEEEEESSSTTS-----CG----GGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred ---ccCccEEEEcchhhcC-----CH----HHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 2359999997654211 10 123578889999999999988766543
No 92
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.32 E-value=2.8e-12 Score=104.71 Aligned_cols=121 Identities=17% Similarity=0.091 Sum_probs=84.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-------C---CCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-------P---IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-------~---~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
++.+|||+|||+|.++..+++.. ..+|+|+|+++ +. . ..++.++ .+|+.+..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-~~d~~~~~------ 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL----------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYF-CCGLQDFT------ 141 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT----------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEE-ECCGGGCC------
T ss_pred CCCEEEEECCCCCHHHHHHHHhc----------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEE-EcChhhcC------
Confidence 58899999999999999887653 25999999996 21 0 1236677 88866521
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC--------------ChHHHHH
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR--------------NRPQLEE 195 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~--------------~~~~~~~ 195 (229)
++++.||+|+++... +.... .....++..+.++|+|||.+++..+... ...++.+
T Consensus 142 --~~~~~fD~v~~~~~l-----~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (241)
T 2ex4_A 142 --PEPDSYDVIWIQWVI-----GHLTD----QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRR 210 (241)
T ss_dssp --CCSSCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHH
T ss_pred --CCCCCEEEEEEcchh-----hhCCH----HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHH
Confidence 345689999997643 11111 1235788999999999999998553211 3577888
Q ss_pred HHHhh-CCeeEEEcC
Q psy1489 196 SITRF-YSQVKILKP 209 (229)
Q Consensus 196 ~l~~~-F~~v~~~kp 209 (229)
.+++. |..+.+...
T Consensus 211 ~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 211 IICSAGLSLLAEERQ 225 (241)
T ss_dssp HHHHTTCCEEEEEEC
T ss_pred HHHHcCCeEEEeeec
Confidence 88776 877776653
No 93
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.31 E-value=6.3e-13 Score=110.19 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=73.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
++++.+|||+|||+|.++..+++. +.++|+|+|+++ +. .+ +++.++ .+|+.+..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~--- 109 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH----------VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGI-VGSMDDLP--- 109 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT----------CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ECCTTSCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc----------cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEE-EcChhhCC---
Confidence 567899999999999999998876 346999999997 21 12 358888 99987732
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+++++||+|++...... .+ ...++..+.++|+|||.+++..
T Consensus 110 -----~~~~~fD~i~~~~~~~~-----~~-------~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 110 -----FRNEELDLIWSEGAIYN-----IG-------FERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp -----CCTTCEEEEEESSCGGG-----TC-------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred -----CCCCCEEEEEEcCCcee-----cC-------HHHHHHHHHHHcCCCCEEEEEE
Confidence 45678999999765311 11 2467889999999999999865
No 94
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=2e-12 Score=107.96 Aligned_cols=98 Identities=19% Similarity=0.165 Sum_probs=73.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
..++.+|||+|||+|.++..+++. .++|+|+|+++ |. ..+++.+. .+|+.+.. +
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~d~~~~~--------~ 114 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQS-----------GAEVLGTDNAATMIEKARQNYPHLHFD-VADARNFR--------V 114 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-----------TCEEEEEESCHHHHHHHHHHCTTSCEE-ECCTTTCC--------C
T ss_pred CCCCCEEEEecCCCCHHHHHHHhC-----------CCeEEEEECCHHHHHHHHhhCCCCEEE-ECChhhCC--------c
Confidence 357889999999999999998872 26999999997 21 23578888 89987632 2
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR 188 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~ 188 (229)
+++||+|++...... ..+ ...++.++.++|+|||.+++..+...
T Consensus 115 -~~~fD~v~~~~~l~~----~~d-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 115 -DKPLDAVFSNAMLHW----VKE-------PEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp -SSCEEEEEEESCGGG----CSC-------HHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred -CCCcCEEEEcchhhh----CcC-------HHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 468999999765311 111 24678899999999999998766543
No 95
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.31 E-value=9.7e-12 Score=108.60 Aligned_cols=120 Identities=13% Similarity=0.124 Sum_probs=83.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC---CCeEEecCCCCChhHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID---GAVVLSKCDFTQPDIQ 125 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~---~~~~~~~~D~~~~~~~ 125 (229)
.++.+|||+|||+|.++..+++.. |..+|+|+|+++ +. .+. ++.++ .+|+.+.
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~---------p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~-~~D~~~~--- 287 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKN---------PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFM-INNALSG--- 287 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEE-ECSTTTT---
T ss_pred cCCCeEEEEeCcchHHHHHHHHHC---------CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEE-echhhcc---
Confidence 356899999999999999999875 567999999997 21 111 36678 8888762
Q ss_pred HHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhCCeeE
Q psy1489 126 DRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFYSQVK 205 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F~~v~ 205 (229)
+++++||+|++|++..... ...+ .....++..+.++|+|||.+++........ ...+.+.|..++
T Consensus 288 ------~~~~~fD~Ii~nppfh~~~-~~~~-----~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~---~~~l~~~fg~~~ 352 (375)
T 4dcm_A 288 ------VEPFRFNAVLCNPPFHQQH-ALTD-----NVAWEMFHHARRCLKINGELYIVANRHLDY---FHKLKKIFGNCT 352 (375)
T ss_dssp ------CCTTCEEEEEECCCC--------C-----CHHHHHHHHHHHHEEEEEEEEEEEETTSCH---HHHHHHHHSCCE
T ss_pred ------CCCCCeeEEEECCCcccCc-ccCH-----HHHHHHHHHHHHhCCCCcEEEEEEECCcCH---HHHHHHhcCCEE
Confidence 4567899999987652110 0001 123467889999999999999966554444 344556676665
Q ss_pred EE
Q psy1489 206 IL 207 (229)
Q Consensus 206 ~~ 207 (229)
+.
T Consensus 353 ~~ 354 (375)
T 4dcm_A 353 TI 354 (375)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 96
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.31 E-value=5.9e-13 Score=108.28 Aligned_cols=94 Identities=10% Similarity=0.139 Sum_probs=70.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCC-CCeEEecCCCCChhHHHHHHHHh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PID-GAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~-~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
.++.+|||+|||+|.++..+++.. .+|+|+|+++ +. ..+ ++.++ .+|+.+. .
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~v~~~-~~d~~~~---------~ 99 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF-----------NDITCVEASEEAISHAQGRLKDGITYI-HSRFEDA---------Q 99 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC-----------SCEEEEESCHHHHHHHHHHSCSCEEEE-ESCGGGC---------C
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC-----------CcEEEEeCCHHHHHHHHHhhhCCeEEE-EccHHHc---------C
Confidence 367899999999999999988753 3899999997 21 122 78888 8887652 3
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHH-HcccCCCEEEEeec
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAV-TYSKPGADCLIKIW 185 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~-~~LkpgG~~v~~~~ 185 (229)
++++||+|++..... .. .....+++++. ++|||||.+++...
T Consensus 100 ~~~~fD~v~~~~~l~-----~~------~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 100 LPRRYDNIVLTHVLE-----HI------DDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp CSSCEEEEEEESCGG-----GC------SSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCcccEEEEhhHHH-----hh------cCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 467899999965431 11 11247889999 99999999998764
No 97
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.31 E-value=4.8e-12 Score=102.80 Aligned_cols=138 Identities=10% Similarity=0.022 Sum_probs=94.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC-----C----CCCeEEecCCCCChhHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP-----I----DGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~-----~----~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.++.+|||+|||+|.++..+++. + .+|+|+|+++ |.. . .++.++ .+|+.+..
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~-~----------~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~-~~d~~~~~------ 97 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK-F----------KNTWAVDLSQEMLSEAENKFRSQGLKPRLA-CQDISNLN------ 97 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG-S----------SEEEEECSCHHHHHHHHHHHHHTTCCCEEE-CCCGGGCC------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC-C----------CcEEEEECCHHHHHHHHHHHhhcCCCeEEE-ecccccCC------
Confidence 36789999999999999998875 2 5899999997 210 0 167888 88876521
Q ss_pred HHhCCCCccEEEeCC-CCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC----------------------
Q psy1489 130 TILKDDKLDVVLSDM-APNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD---------------------- 186 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~-~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~---------------------- 186 (229)
++ +.||+|++.. .. .+.........++..+.++|+|||.+++.+..
T Consensus 98 --~~-~~fD~v~~~~~~l--------~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (246)
T 1y8c_A 98 --IN-RKFDLITCCLDST--------NYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFY 166 (246)
T ss_dssp --CS-CCEEEEEECTTGG--------GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEE
T ss_pred --cc-CCceEEEEcCccc--------cccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEE
Confidence 22 6899999954 32 11101123467889999999999999984321
Q ss_pred -----------------------------------CCChHHHHHHHHhh-CCeeEEEcCCC---CCCCCceEEEEeccC
Q psy1489 187 -----------------------------------GRNRPQLEESITRF-YSQVKILKPPS---SRSHSAELFLLGRGF 226 (229)
Q Consensus 187 -----------------------------------~~~~~~~~~~l~~~-F~~v~~~kp~~---sr~~s~E~Y~v~~~~ 226 (229)
.....++...+++. |..+.+..... ....+..+++||++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~ 245 (246)
T 1y8c_A 167 YWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLG 245 (246)
T ss_dssp EEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEEC
T ss_pred EEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEec
Confidence 11457778888776 87777764421 123567788888863
No 98
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.30 E-value=2.8e-12 Score=107.64 Aligned_cols=143 Identities=16% Similarity=0.136 Sum_probs=86.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC-----CC-------------------C-----
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP-----ID-------------------G----- 110 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~-----~~-------------------~----- 110 (229)
++.+|||||||+|.++..++.. +..+|+|+|+++ |.. .. +
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS----------HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECW 140 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG----------GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCH
T ss_pred CCCeEEEECCCcChHHHHhhcc----------CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccch
Confidence 6789999999999965544432 235999999997 311 00 0
Q ss_pred -----------CeEEecCCCCCh-hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHH----HHHHHHHHHHHHHcc
Q psy1489 111 -----------AVVLSKCDFTQP-DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLI----TQLAIAVIRFAVTYS 174 (229)
Q Consensus 111 -----------~~~~~~~D~~~~-~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~----~~~~~~~l~~~~~~L 174 (229)
+.++ .+|+.+. ... ...+++++||+|++.... .. ......++.++.++|
T Consensus 141 ~~~~~~~~~~~~~~~-~~D~~~~~~~~---~~~~~~~~fD~V~~~~~l-----------~~~~~~~~~~~~~l~~~~r~L 205 (289)
T 2g72_A 141 QDKERQLRARVKRVL-PIDVHQPQPLG---AGSPAPLPADALVSAFCL-----------EAVSPDLASFQRALDHITTLL 205 (289)
T ss_dssp HHHHHHHHHHEEEEE-CCCTTSSSTTC---SSCSSCSSEEEEEEESCH-----------HHHCSSHHHHHHHHHHHHTTE
T ss_pred hhhHHHHHhhhceEE-ecccCCCCCcc---ccccCCCCCCEEEehhhh-----------hhhcCCHHHHHHHHHHHHHhc
Confidence 2234 4466541 100 001334679999996532 22 334568899999999
Q ss_pred cCCCEEEEeec---------------CCCChHHHHHHHHhh-CCeeEEEcCC----CC--CCCCceEEEEeccCCC
Q psy1489 175 KPGADCLIKIW---------------DGRNRPQLEESITRF-YSQVKILKPP----SS--RSHSAELFLLGRGFKG 228 (229)
Q Consensus 175 kpgG~~v~~~~---------------~~~~~~~~~~~l~~~-F~~v~~~kp~----~s--r~~s~E~Y~v~~~~~~ 228 (229)
||||.|++... ......++...+... |..+.+..-. .. .....-+++|+.+.++
T Consensus 206 kpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (289)
T 2g72_A 206 RPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVG 281 (289)
T ss_dssp EEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEECCGGGCCTTBCCCEEEEEEEEECC
T ss_pred CCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEeeccccccccccCcceEEEEEEeccc
Confidence 99999987521 112457778888776 7655544322 11 1344457777766543
No 99
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.30 E-value=7.3e-12 Score=101.76 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=67.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------CCCCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
++++.+|||+|||+|.++..+++. .+|+|+|+++ +. .-.++.++ .+|+.+..
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-~~d~~~~~----- 92 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH------------YEVTGVDLSEEMLEIAQEKAMETNRHVDFW-VQDMRELE----- 92 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT------------SEEEEEESCHHHHHHHHHHHHHTTCCCEEE-ECCGGGCC-----
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC------------CeEEEEECCHHHHHHHHHhhhhcCCceEEE-EcChhhcC-----
Confidence 456789999999999998887654 4899999997 21 11357888 88876521
Q ss_pred HHHhCCCCccEEEeCC-CCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 129 VTILKDDKLDVVLSDM-APNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~-~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+ +++||+|++.. .. .+.........+++.+.++|+|||.+++.
T Consensus 93 ---~-~~~fD~v~~~~~~~--------~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 93 ---L-PEPVDAITILCDSL--------NYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ---C-SSCEEEEEECTTGG--------GGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---C-CCCcCEEEEeCCch--------hhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 2 36899999854 21 11111133457889999999999999874
No 100
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.30 E-value=3.4e-12 Score=100.57 Aligned_cols=117 Identities=21% Similarity=0.156 Sum_probs=80.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++. + .+|+|+|+++ +. ..+++.++ .+|+.+..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-~~d~~~~~----- 93 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN-G----------YDVDAWDKNAMSIANVERIKSIENLDNLHTR-VVDLNNLT----- 93 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHHHTCTTEEEE-ECCGGGCC-----
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC-C----------CeEEEEECCHHHHHHHHHHHHhCCCCCcEEE-EcchhhCC-----
Confidence 35679999999999999998876 3 5999999997 21 23467888 88876631
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec-C------------CCChHHHHH
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW-D------------GRNRPQLEE 195 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~-~------------~~~~~~~~~ 195 (229)
+ ++.||+|++...... .+ .+....++..+.++|+|||.+++..+ . .....++.+
T Consensus 94 ---~-~~~~D~v~~~~~l~~-----~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 160 (199)
T 2xvm_A 94 ---F-DRQYDFILSTVVLMF-----LE----AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRR 160 (199)
T ss_dssp ---C-CCCEEEEEEESCGGG-----SC----GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHH
T ss_pred ---C-CCCceEEEEcchhhh-----CC----HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHH
Confidence 2 578999999764311 11 01235678899999999999876432 1 113456666
Q ss_pred HHHhhCCeeEEE
Q psy1489 196 SITRFYSQVKIL 207 (229)
Q Consensus 196 ~l~~~F~~v~~~ 207 (229)
.+.. |..+...
T Consensus 161 ~~~~-f~~~~~~ 171 (199)
T 2xvm_A 161 YYEG-WERVKYN 171 (199)
T ss_dssp HTTT-SEEEEEE
T ss_pred HhcC-CeEEEec
Confidence 6666 6655544
No 101
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.30 E-value=1.6e-12 Score=108.05 Aligned_cols=101 Identities=19% Similarity=0.250 Sum_probs=76.0
Q ss_pred hcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChh
Q psy1489 55 KIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPD 123 (229)
Q Consensus 55 ~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~ 123 (229)
....+.++.+|||+|||+|.++..+++.. |..+|+|+|+++ + ..++++.++ .+|+.+..
T Consensus 31 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~-~~d~~~~~ 100 (276)
T 3mgg_A 31 HDTVYPPGAKVLEAGCGIGAQTVILAKNN---------PDAEITSIDISPESLEKARENTEKNGIKNVKFL-QANIFSLP 100 (276)
T ss_dssp TTCCCCTTCEEEETTCTTSHHHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEE-ECCGGGCC
T ss_pred hcccCCCCCeEEEecCCCCHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE-EcccccCC
Confidence 33345788999999999999999999874 567999999996 2 124578888 88877532
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+++++||+|++...... ..+ ...++..+.++|+|||.+++..
T Consensus 101 --------~~~~~fD~v~~~~~l~~----~~~-------~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 101 --------FEDSSFDHIFVCFVLEH----LQS-------PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp --------SCTTCEEEEEEESCGGG----CSC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCCeeEEEEechhhh----cCC-------HHHHHHHHHHHcCCCcEEEEEE
Confidence 45678999999764311 111 2367888999999999999854
No 102
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.30 E-value=1.2e-11 Score=102.25 Aligned_cols=113 Identities=25% Similarity=0.333 Sum_probs=83.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-C----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-Y----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++. . .+. +.+. .+|+.+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g----------~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~-~~d~~~------ 178 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G----------GKALGVDIDPMVLPQAEANAKRNGVR-PRFL-EGSLEA------ 178 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T----------CEEEEEESCGGGHHHHHHHHHHTTCC-CEEE-ESCHHH------
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C----------CeEEEEECCHHHHHHHHHHHHHcCCc-EEEE-ECChhh------
Confidence 467899999999999999987764 3 29999999972 1 122 6777 776443
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeEE
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVKI 206 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~~ 206 (229)
.+++++||+|+++... +.....+..+.++|+|||.+++..+......++.+.+++. |..+.+
T Consensus 179 ---~~~~~~fD~Vv~n~~~--------------~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 179 ---ALPFGPFDLLVANLYA--------------ELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp ---HGGGCCEEEEEEECCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred ---cCcCCCCCEEEECCcH--------------HHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 2445789999996531 1235678889999999999998766556677888888776 765554
Q ss_pred E
Q psy1489 207 L 207 (229)
Q Consensus 207 ~ 207 (229)
.
T Consensus 242 ~ 242 (254)
T 2nxc_A 242 A 242 (254)
T ss_dssp E
T ss_pred e
Confidence 3
No 103
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.30 E-value=6.3e-13 Score=109.25 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=75.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
..++.+|||+|||+|.++..+++.. +.++|+|+|+++ |. ..+++.++ .+|+.+. .
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~---------~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~d~~~~---------~ 91 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRY---------GVNVITGIDSDDDMLEKAADRLPNTNFG-KADLATW---------K 91 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHH---------CTTSEEEEESCHHHHHHHHHHSTTSEEE-ECCTTTC---------C
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHhCCCcEEE-ECChhhc---------C
Confidence 3577899999999999999999886 457999999997 21 14678888 9998762 1
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
++++||+|++..... .. .....++.++.++|+|||.+++..+.
T Consensus 92 ~~~~fD~v~~~~~l~-----~~------~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 92 PAQKADLLYANAVFQ-----WV------PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp CSSCEEEEEEESCGG-----GS------TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred ccCCcCEEEEeCchh-----hC------CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 357899999966431 11 12346888999999999999987654
No 104
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.29 E-value=6.2e-12 Score=98.15 Aligned_cols=115 Identities=16% Similarity=0.215 Sum_probs=83.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++ + ... .++.+. .+|+.+
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~-----------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~----- 93 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV-----------RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLM-EGDAPE----- 93 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS-----------SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEE-ESCHHH-----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc-----------CEEEEEECCHHHHHHHHHHHHHcCCCcceEEE-ecCHHH-----
Confidence 4678899999999999999988752 5999999986 1 122 466777 776443
Q ss_pred HHHHHhCC-CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCee
Q psy1489 127 RLVTILKD-DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQV 204 (229)
Q Consensus 127 ~i~~~~~~-~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v 204 (229)
.++. ..||+|+++... + + ....+..+.++|+|||.+++..+......++.+.++.. | .+
T Consensus 94 ----~~~~~~~~D~v~~~~~~-----~---~------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~-~~ 154 (192)
T 1l3i_A 94 ----ALCKIPDIDIAVVGGSG-----G---E------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF-DV 154 (192)
T ss_dssp ----HHTTSCCEEEEEESCCT-----T---C------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC-CC
T ss_pred ----hcccCCCCCEEEECCch-----H---H------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC-ce
Confidence 1333 589999997642 1 1 24678889999999999998776655667777777776 6 55
Q ss_pred EEEcC
Q psy1489 205 KILKP 209 (229)
Q Consensus 205 ~~~kp 209 (229)
+....
T Consensus 155 ~~~~~ 159 (192)
T 1l3i_A 155 NITEL 159 (192)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55443
No 105
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.28 E-value=2.9e-12 Score=110.02 Aligned_cols=110 Identities=22% Similarity=0.240 Sum_probs=78.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------------------CCCCCeEEec
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------------------PIDGAVVLSK 116 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------------------~~~~~~~~~~ 116 (229)
+.++.+|||+|||+|.++..+++..+ +.++|+|+|+++ +. ...+++++ .
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~-~ 173 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVG--------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI-H 173 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC--------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE-E
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhC--------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE-E
Confidence 46789999999999999999998875 568999999986 10 02468888 8
Q ss_pred CCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHH
Q psy1489 117 CDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEES 196 (229)
Q Consensus 117 ~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~ 196 (229)
+|+.+.. ..++++.||+|++|+... ...+..+.++|+|||.+++.........++++.
T Consensus 174 ~d~~~~~------~~~~~~~fD~V~~~~~~~----------------~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 231 (336)
T 2b25_A 174 KDISGAT------EDIKSLTFDAVALDMLNP----------------HVTLPVFYPHLKHGGVCAVYVVNITQVIELLDG 231 (336)
T ss_dssp SCTTCCC-------------EEEEEECSSST----------------TTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHH
T ss_pred CChHHcc------cccCCCCeeEEEECCCCH----------------HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHH
Confidence 9987731 013456799999987421 125677999999999999876654445555665
Q ss_pred HHh
Q psy1489 197 ITR 199 (229)
Q Consensus 197 l~~ 199 (229)
++.
T Consensus 232 l~~ 234 (336)
T 2b25_A 232 IRT 234 (336)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 106
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.28 E-value=2.7e-11 Score=99.49 Aligned_cols=99 Identities=14% Similarity=0.091 Sum_probs=70.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC----------C-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP----------I-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~----------~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|..+..+++.++ +.++|+++|+++ +.. + .+++++ .+|..+. ...
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~--------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~-~gda~~~--l~~ 127 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALP--------DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLR-LGPALDT--LHS 127 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSC--------TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEE-ESCHHHH--HHH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-EcCHHHH--HHH
Confidence 4578999999999999999998764 468999999998 321 2 357788 8875542 111
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.....+++||+|++|... . .....+..+.++|+|||.+++.
T Consensus 128 ~~~~~~~~~fD~V~~d~~~--------~------~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 128 LLNEGGEHQFDFIFIDADK--------T------NYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHHHHCSSCEEEEEEESCG--------G------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhhccCCCCEeEEEEcCCh--------H------HhHHHHHHHHHhcCCCeEEEEE
Confidence 1111124689999998742 1 1234678899999999999984
No 107
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.28 E-value=7.4e-12 Score=99.66 Aligned_cols=109 Identities=18% Similarity=0.074 Sum_probs=77.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++..+++.. . .+|+|+|+++ + ...+++.++ .+|+.+..
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~---------~-~~v~~~D~s~~~~~~a~~~~~~~~~i~~~-~~d~~~~~------ 102 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGG---------F-PNVTSVDYSSVVVAAMQACYAHVPQLRWE-TMDVRKLD------ 102 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTT---------C-CCEEEEESCHHHHHHHHHHTTTCTTCEEE-ECCTTSCC------
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcC---------C-CcEEEEeCCHHHHHHHHHhcccCCCcEEE-EcchhcCC------
Confidence 4678999999999999999988762 2 3899999996 2 122578888 89987731
Q ss_pred HHhCCCCccEEEeCCCCCC----CC-CCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC
Q psy1489 130 TILKDDKLDVVLSDMAPNA----TG-MREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~----~g-~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
++++.||+|+++++... .+ .+... .........++.++.++|+|||.+++..+..
T Consensus 103 --~~~~~fD~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 103 --FPSASFDVVLEKGTLDALLAGERDPWTVS-SEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp --SCSSCEEEEEEESHHHHHTTTCSCTTSCC-HHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred --CCCCcccEEEECcchhhhccccccccccc-cchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 45678999998653210 00 01111 1223455788999999999999999877654
No 108
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.28 E-value=1.3e-11 Score=99.14 Aligned_cols=101 Identities=16% Similarity=0.095 Sum_probs=71.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------------CCCCCeEEecCCCCChh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------------PIDGAVVLSKCDFTQPD 123 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------------~~~~~~~~~~~D~~~~~ 123 (229)
..++.+|||+|||+|.++..+++.. |.++|+|+|+++ |. ..+++.++ ++|+.+..
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~---------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~-~~d~~~l~ 94 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQN---------PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYL-WATAERLP 94 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHC---------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEE-ECCSTTCC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEE-ecchhhCC
Confidence 4578999999999999999999875 568999999998 21 13467888 99988732
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
++++. |.|+..++. ...+.........++.++.++|||||.+++..
T Consensus 95 --------~~~~~-d~v~~~~~~------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 95 --------PLSGV-GELHVLMPW------GSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp --------SCCCE-EEEEEESCC------HHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred --------CCCCC-CEEEEEccc------hhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 33444 777754321 00010122222578899999999999999854
No 109
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.28 E-value=4.5e-12 Score=105.86 Aligned_cols=116 Identities=13% Similarity=0.246 Sum_probs=85.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++.++ +.++|+++|+++ +. .+ +++.++ .+|+.+.
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~---- 176 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVG--------SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIK-VRDISEG---- 176 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTT--------TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEE-CCCGGGC----
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEE-ECCHHHc----
Confidence 46789999999999999999998865 668999999986 10 12 357777 8887652
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCeeE
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQVK 205 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v~ 205 (229)
++++.||+|++|++. ...++..+.++|+|||.+++.........++.+.++.. |..+.
T Consensus 177 -----~~~~~~D~V~~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 177 -----FDEKDVDALFLDVPD----------------PWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp -----CSCCSEEEEEECCSC----------------GGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEE
T ss_pred -----ccCCccCEEEECCcC----------------HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeE
Confidence 455789999997632 12467778999999999998765444455666666654 66555
Q ss_pred EEc
Q psy1489 206 ILK 208 (229)
Q Consensus 206 ~~k 208 (229)
+.+
T Consensus 236 ~~~ 238 (277)
T 1o54_A 236 VWE 238 (277)
T ss_dssp EEC
T ss_pred EEE
Confidence 554
No 110
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.28 E-value=3e-12 Score=107.90 Aligned_cols=101 Identities=11% Similarity=0.075 Sum_probs=73.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC------------CCCCCeEEecCCCCChhHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY------------PIDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~------------~~~~~~~~~~~D~~~~~~~~ 126 (229)
.++.+|||+|||+|.++..+++... +..+|+|+|+++ +. ...++.++ ++|+.+.....
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~-~~d~~~~~~~~ 105 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELK--------PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFK-ISSSDDFKFLG 105 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSS--------CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEE-ECCTTCCGGGC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC--------CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEE-EcCHHhCCccc
Confidence 4789999999999999999998653 457999999997 21 14578899 99998743100
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
...+..++||+|++..... .. ....++.++.++|+|||.|++.
T Consensus 106 --~~~~~~~~fD~V~~~~~l~-----~~-------~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 106 --ADSVDKQKIDMITAVECAH-----WF-------DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp --TTTTTSSCEEEEEEESCGG-----GS-------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred --cccccCCCeeEEeHhhHHH-----Hh-------CHHHHHHHHHHhcCCCcEEEEE
Confidence 0001127899999976431 11 2357888999999999999873
No 111
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=2.7e-12 Score=105.44 Aligned_cols=113 Identities=20% Similarity=0.255 Sum_probs=83.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----------CCCCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----------PIDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----------~~~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++.++ +.++|+++|+++ +. ..+++.+. .+|+.+.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~-~~d~~~~---- 160 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVG--------EKGLVESYEARPHHLAQAERNVRAFWQVENVRFH-LGKLEEA---- 160 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEE-ESCGGGC----
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEE-ECchhhc----
Confidence 46789999999999999999999865 568999999986 10 23567788 8887652
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCee
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQV 204 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v 204 (229)
.++++.||+|+++++. ...++..+.++|+|||.+++.........++.+.++.. |..+
T Consensus 161 ----~~~~~~~D~v~~~~~~----------------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~ 219 (258)
T 2pwy_A 161 ----ELEEAAYDGVALDLME----------------PWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLE 219 (258)
T ss_dssp ----CCCTTCEEEEEEESSC----------------GGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEE
T ss_pred ----CCCCCCcCEEEECCcC----------------HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceE
Confidence 1455789999997531 12567789999999999998765544455666666543 5433
No 112
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.28 E-value=9.8e-12 Score=102.67 Aligned_cols=94 Identities=14% Similarity=0.095 Sum_probs=69.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|..+..++... +..+|+|+|+++ + ..+.+++++ ++|+.+..
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~-~~d~~~~~----- 143 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR---------PELELVLVDATRKKVAFVERAIEVLGLKGARAL-WGRAEVLA----- 143 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEE-ECCHHHHT-----
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEE-ECcHHHhh-----
Confidence 467899999999999999999875 568999999996 2 134568888 88765411
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.....+++||+|+|.... + ...++..+.++|+|||.|++-
T Consensus 144 ~~~~~~~~fD~I~s~a~~--------~-------~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 144 REAGHREAYARAVARAVA--------P-------LCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp TSTTTTTCEEEEEEESSC--------C-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred cccccCCCceEEEECCcC--------C-------HHHHHHHHHHHcCCCeEEEEE
Confidence 000113689999996531 1 235778899999999998863
No 113
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.28 E-value=7.3e-12 Score=101.79 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=73.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------CCCCCCeEEecCCCCChhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------YPIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------~~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
++++.+|||+|||+|.++..+++. + .+|+|+|+++ + ....++.++ .+|+.+..
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~d~~~~~------- 111 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT-G----------YKAVGVDISEVMIQKGKERGEGPDLSFI-KGDLSSLP------- 111 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT-T----------CEEEEEESCHHHHHHHHTTTCBTTEEEE-ECBTTBCS-------
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc-C----------CeEEEEECCHHHHHHHHhhcccCCceEE-EcchhcCC-------
Confidence 457899999999999999998876 3 5999999996 2 123568888 89988732
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
+++++||+|++...... ..+ ...++..+.++|+|||.+++..+
T Consensus 112 -~~~~~fD~v~~~~~l~~----~~~-------~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 112 -FENEQFEAIMAINSLEW----TEE-------PLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp -SCTTCEEEEEEESCTTS----SSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCCCccEEEEcChHhh----ccC-------HHHHHHHHHHHhCCCeEEEEEEc
Confidence 45789999999664321 111 24678889999999999998764
No 114
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.28 E-value=2.1e-12 Score=105.51 Aligned_cols=97 Identities=19% Similarity=0.183 Sum_probs=73.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
++++.+|||+|||+|.++..+++.. .+|+|+|+++ +. .++++.+. .+|+.+..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~---- 82 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV-----------QECIGVDATKEMVEVASSFAQEKGVENVRFQ-QGTAESLP---- 82 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS-----------SEEEEEESCHHHHHHHHHHHHHHTCCSEEEE-ECBTTBCC----
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC-----------CEEEEEECCHHHHHHHHHHHHHcCCCCeEEE-ecccccCC----
Confidence 5678999999999999999988753 4999999997 21 23568888 88887632
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
++++.||+|++..... +..+ ...++.++.++|+|||.+++..+.
T Consensus 83 ----~~~~~fD~v~~~~~l~----~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 83 ----FPDDSFDIITCRYAAH----HFSD-------VRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp ----SCTTCEEEEEEESCGG----GCSC-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----CCCCcEEEEEECCchh----hccC-------HHHHHHHHHHHcCCCcEEEEEEcC
Confidence 4567899999975431 1111 346788999999999999986543
No 115
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.27 E-value=2e-12 Score=107.52 Aligned_cols=137 Identities=13% Similarity=0.068 Sum_probs=80.2
Q ss_pred CCchhHhhhccCcHHHHHHHhcCccchhhhhhHhhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEE
Q psy1489 18 HSSHLWLKRQFADPYVQKAKKENYRCRSAFKLLEIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLV 97 (229)
Q Consensus 18 ~~~~~w~~~~~~d~y~~~~~~~~~~~r~~~kl~~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v 97 (229)
+....|.. .+..|........+..+. ..+.+... +.++.+|||||||+|.++..++++. ++|
T Consensus 9 s~a~~wd~--~a~~f~~~~~~~~~~~~~----~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~g-----------~~V 70 (261)
T 3iv6_A 9 SKAEAWEL--IGNQFWTIGRVAARPSDR----ENDIFLEN-IVPGSTVAVIGASTRFLIEKALERG-----------ASV 70 (261)
T ss_dssp TTHHHHHT--TTTHHHHTSCGGGSCCHH----HHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHTT-----------CEE
T ss_pred hhhhHHHH--HHHHHHHHhhccccHHHH----HHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhcC-----------CEE
Confidence 34567864 466776543332212111 11222223 4678999999999999999998763 599
Q ss_pred EEEeCCC-CCC-----CCCCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHH
Q psy1489 98 LSVDKLP-IYP-----IDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAV 171 (229)
Q Consensus 98 ~gvD~~~-~~~-----~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~ 171 (229)
+|+|+|+ |.. .... .+ +.++.+.... +.. ..+++||+|+++.... ... ......++..+.
T Consensus 71 ~gvD~S~~ml~~Ar~~~~~~-~v-~~~~~~~~~~--~~~-~~~~~fD~Vv~~~~l~-----~~~----~~~~~~~l~~l~ 136 (261)
T 3iv6_A 71 TVFDFSQRMCDDLAEALADR-CV-TIDLLDITAE--IPK-ELAGHFDFVLNDRLIN-----RFT----TEEARRACLGML 136 (261)
T ss_dssp EEEESCHHHHHHHHHHTSSS-CC-EEEECCTTSC--CCG-GGTTCCSEEEEESCGG-----GSC----HHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHhc-cc-eeeeeecccc--ccc-ccCCCccEEEEhhhhH-----hCC----HHHHHHHHHHHH
Confidence 9999997 311 1111 12 3333332100 000 1146899999976431 111 123456788899
Q ss_pred HcccCCCEEEEeecCC
Q psy1489 172 TYSKPGADCLIKIWDG 187 (229)
Q Consensus 172 ~~LkpgG~~v~~~~~~ 187 (229)
++| |||.+++....+
T Consensus 137 ~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 137 SLV-GSGTVRASVKLG 151 (261)
T ss_dssp HHH-TTSEEEEEEEBS
T ss_pred HhC-cCcEEEEEeccC
Confidence 999 999999876443
No 116
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.27 E-value=1.5e-11 Score=104.85 Aligned_cols=138 Identities=12% Similarity=0.168 Sum_probs=93.8
Q ss_pred eeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-------C---CCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 64 KVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-------P---IDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 64 ~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-------~---~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+|||||||+|.++..++++. +..+|++||+++ +. . .++++++ .+|..+ ....+
T Consensus 92 rVLdIG~G~G~la~~la~~~---------p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~-~~Da~~------~l~~~ 155 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVY---------PQSRNTVVELDAELARLSREWFDIPRAPRVKIR-VDDARM------VAESF 155 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHS---------TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEE-ESCHHH------HHHTC
T ss_pred EEEEEECCcCHHHHHHHHHC---------CCcEEEEEECCHHHHHHHHHhccccCCCceEEE-ECcHHH------HHhhc
Confidence 99999999999999999875 557999999997 21 1 2467888 887554 11223
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCC---hHHHHHHHHhhCCeeEEEc-
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRN---RPQLEESITRFYSQVKILK- 208 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~---~~~~~~~l~~~F~~v~~~k- 208 (229)
++++||+|++|..... +.. .+. .....++.+.++|+|||.|++....... ...++..++..|..+.++.
T Consensus 156 ~~~~fDvIi~D~~~~~-~~~--~~L----~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~~ 228 (317)
T 3gjy_A 156 TPASRDVIIRDVFAGA-ITP--QNF----TTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIAD 228 (317)
T ss_dssp CTTCEEEEEECCSTTS-CCC--GGG----SBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEEC
T ss_pred cCCCCCEEEECCCCcc-ccc--hhh----hHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEEe
Confidence 4678999999875321 111 111 0136788899999999999987765443 3467788888999998875
Q ss_pred CCCCCC-CCceEEEEec
Q psy1489 209 PPSSRS-HSAELFLLGR 224 (229)
Q Consensus 209 p~~sr~-~s~E~Y~v~~ 224 (229)
|..++. ...-+.++|.
T Consensus 229 ~~~~~g~~~gN~Vl~As 245 (317)
T 3gjy_A 229 PPMLKGRRYGNIILMGS 245 (317)
T ss_dssp HHHHTTSSCEEEEEEEE
T ss_pred cCCCCCCcCceEEEEEE
Confidence 222232 2334445553
No 117
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.27 E-value=7.5e-12 Score=105.51 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=74.9
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CC--------------------------
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PI-------------------------- 108 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~-------------------------- 108 (229)
++.+|||+|||+|.++..+++.. +..+|+|+|+++ |. .+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~---------~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW---------GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEG 116 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT---------CCSEEEEEESCHHHHHHHHHTC--------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc---------CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccc
Confidence 57899999999999999999986 456999999986 10 00
Q ss_pred -------------------------------------CCCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCC
Q psy1489 109 -------------------------------------DGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGM 151 (229)
Q Consensus 109 -------------------------------------~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~ 151 (229)
.++.+. ++|+.+.... +. .+.++.||+|+|....
T Consensus 117 ~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~-~~d~~~~~~~--~~-~~~~~~fD~I~~~~vl----- 187 (292)
T 3g07_A 117 TTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFV-TGNYVLDRDD--LV-EAQTPEYDVVLCLSLT----- 187 (292)
T ss_dssp -------------------------CCSSTTCCSSTTTTEEEE-ECCCCCSSHH--HH-TTCCCCEEEEEEESCH-----
T ss_pred cccccccccccchhhhccCccccccccccccccccccccceEE-ecccccCccc--cc-cccCCCcCEEEEChHH-----
Confidence 367888 8988763210 11 1356789999995431
Q ss_pred CcccHHH---HHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 152 REMDHDL---ITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 152 ~~~d~~~---~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.+.. .......+++.+.++|+|||.|++..
T Consensus 188 ---~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 188 ---KWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ---HHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 1211 22356788999999999999999853
No 118
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.27 E-value=8.5e-12 Score=105.90 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=74.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++ +. .+ .++.++ .+|+.+..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~--- 180 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG----------SRVEGVTLSAAQADFGNRRARELRIDDHVRSR-VCNMLDTP--- 180 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC----------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ECCTTSCC---
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEE-ECChhcCC---
Confidence 46789999999999999999998753 6999999997 21 12 258888 99988732
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
++++.||+|++..... ..+ ...++.++.++|||||.+++..+
T Consensus 181 -----~~~~~fD~V~~~~~l~-----~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 181 -----FDKGAVTASWNNESTM-----YVD-------LHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp -----CCTTCEEEEEEESCGG-----GSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CCCCCEeEEEECCchh-----hCC-------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 4568999999965431 112 45788999999999999998664
No 119
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.27 E-value=3.9e-12 Score=103.41 Aligned_cols=95 Identities=21% Similarity=0.308 Sum_probs=70.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------CCCCCCeEEecCCCCChhHHHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------YPIDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------~~~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++ + ....++.++ .+|+.+..
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~-~~d~~~~~-------- 102 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-G---------ASYVLGLDLSEKMLARARAAGPDTGITYE-RADLDKLH-------- 102 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T---------CSEEEEEESCHHHHHHHHHTSCSSSEEEE-ECCGGGCC--------
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-C---------CCeEEEEcCCHHHHHHHHHhcccCCceEE-EcChhhcc--------
Confidence 46789999999999999998875 2 23899999996 2 112357788 88876521
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
++++.||+|++..... ..+ ....++..+.++|+|||.+++.+
T Consensus 103 ~~~~~fD~v~~~~~l~-----~~~------~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 103 LPQDSFDLAYSSLALH-----YVE------DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CCTTCEEEEEEESCGG-----GCS------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCceEEEEecccc-----ccc------hHHHHHHHHHHhcCcCcEEEEEe
Confidence 4467899999966431 111 13467888999999999999865
No 120
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.26 E-value=3.2e-12 Score=103.76 Aligned_cols=94 Identities=12% Similarity=0.114 Sum_probs=69.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCC--CCCeEEecCCCCChhHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPI--DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~--~~~~~~~~~D~~~~~~~~~ 127 (229)
++.+|||+|||+|..+..+++.++ +.++|+++|+++ + ..+ .+++++ .+|..+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~-~gda~~------ 120 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLA--------DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFL-LSRPLD------ 120 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSC--------TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE-CSCHHH------
T ss_pred CCCCEEEEcCCchHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEE-EcCHHH------
Confidence 345999999999999999999874 568999999997 2 122 257788 887544
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+...+.+++||+|++|.... . ....+..+.++|+|||.+++.
T Consensus 121 ~l~~~~~~~fD~V~~d~~~~--------~------~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVSPM--------D------LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp HGGGSCTTCEEEEEECCCTT--------T------HHHHHHHHHHHEEEEEEEEET
T ss_pred HHHHhcCCCcCeEEEcCcHH--------H------HHHHHHHHHHHcCCCcEEEEe
Confidence 11223357899999987431 1 234678899999999999974
No 121
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.26 E-value=6.5e-12 Score=104.67 Aligned_cols=117 Identities=19% Similarity=0.298 Sum_probs=86.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----------C--CCCCeEEecCCCCChhH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----------P--IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----------~--~~~~~~~~~~D~~~~~~ 124 (229)
+.++.+|||+|||+|.++..+++.++ +.++|+++|+++ +. . ..++.++ .+|+.+.
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~-~~d~~~~-- 165 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVG--------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV-VSDLADS-- 165 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE-CSCGGGC--
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEE-ECchHhc--
Confidence 46789999999999999999998775 568999999986 20 1 3467888 8887652
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHh--hCC
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITR--FYS 202 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~--~F~ 202 (229)
.++++.||+|+++++. ...++..+.++|+|||.+++.........++...++. .|.
T Consensus 166 ------~~~~~~~D~v~~~~~~----------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 166 ------ELPDGSVDRAVLDMLA----------------PWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp ------CCCTTCEEEEEEESSC----------------GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred ------CCCCCceeEEEECCcC----------------HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 1346789999997631 1246778999999999999877655555666666664 365
Q ss_pred eeEEEc
Q psy1489 203 QVKILK 208 (229)
Q Consensus 203 ~v~~~k 208 (229)
.+.++.
T Consensus 224 ~~~~~~ 229 (280)
T 1i9g_A 224 EPRAWE 229 (280)
T ss_dssp CCEEEC
T ss_pred CcEEEE
Confidence 555543
No 122
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.26 E-value=2.3e-11 Score=106.47 Aligned_cols=118 Identities=18% Similarity=0.224 Sum_probs=83.7
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-C---------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-Y---------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~---------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
++.+|||+|||+|.++..++++ + .+|+|+|+++. . .-..++++ .+|+.+..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-g----------~~V~gvDis~~al~~A~~n~~~~~~~v~~~-~~D~~~~~------- 293 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-G----------AEVVGVEDDLASVLSLQKGLEANALKAQAL-HSDVDEAL------- 293 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-T----------CEEEEEESBHHHHHHHHHHHHHTTCCCEEE-ECSTTTTS-------
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-C----------CEEEEEECCHHHHHHHHHHHHHcCCCeEEE-Ecchhhcc-------
Confidence 6789999999999999999876 3 59999999972 1 11137888 89988731
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhCCeeEEE
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFYSQVKIL 207 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F~~v~~~ 207 (229)
.++++||+|++|.+....+.... ......+..+.++|+|||.+++........ ...+...|..++..
T Consensus 294 -~~~~~fD~Ii~npp~~~~~~~~~------~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~---~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 294 -TEEARFDIIVTNPPFHVGGAVIL------DVAQAFVNVAAARLRPGGVFFLVSNPFLKY---EPLLEEKFGAFQTL 360 (381)
T ss_dssp -CTTCCEEEEEECCCCCTTCSSCC------HHHHHHHHHHHHHEEEEEEEEEEECTTSCH---HHHHHHHHSCCEEE
T ss_pred -ccCCCeEEEEECCchhhcccccH------HHHHHHHHHHHHhcCcCcEEEEEEcCCCCh---HHHHHHhhccEEEE
Confidence 22478999999876533221111 234578889999999999999976554433 34455557666655
No 123
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.26 E-value=1.6e-11 Score=99.76 Aligned_cols=97 Identities=24% Similarity=0.354 Sum_probs=72.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++..+++.. +.++|+|+|+++ + ...+++.++ .+|+.++...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~-~~d~~~~~~~---- 137 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIA---------DKGIVYAIEYAPRIMRELLDACAERENIIPI-LGDANKPQEY---- 137 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHT---------TTSEEEEEESCHHHHHHHHHHTTTCTTEEEE-ECCTTCGGGG----
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHc---------CCcEEEEEECCHHHHHHHHHHhhcCCCeEEE-ECCCCCcccc----
Confidence 4578999999999999999999886 457999999996 2 123578888 8998873210
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+. +.||+|+.+... .+ ....++..+.++|+|||.+++.
T Consensus 138 ~~~~-~~~D~v~~~~~~-------~~------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 138 ANIV-EKVDVIYEDVAQ-------PN------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TTTS-CCEEEEEECCCS-------TT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccC-ccEEEEEEecCC-------hh------HHHHHHHHHHHhCCCCcEEEEE
Confidence 0123 689999976421 11 1245688899999999999985
No 124
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.25 E-value=2.5e-11 Score=106.43 Aligned_cols=97 Identities=11% Similarity=0.075 Sum_probs=71.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----------------CC--CCCeEEecCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----------------PI--DGAVVLSKCD 118 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----------------~~--~~~~~~~~~D 118 (229)
+.++++|||||||+|.++..++... +..+|+|||+++ +. .+ .++.++ ++|
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~---------g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi-~GD 240 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAAT---------NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE-RGD 240 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHC---------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE-ECC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE-ECc
Confidence 5689999999999999999998875 345799999995 10 11 468899 999
Q ss_pred CCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 119 FTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 119 ~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.+...... + ..||+|+++... . . ......|.+++++|||||+||+.
T Consensus 241 ~~~lp~~d~----~--~~aDVVf~Nn~~----F---~-----pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 241 FLSEEWRER----I--ANTSVIFVNNFA----F---G-----PEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp TTSHHHHHH----H--HTCSEEEECCTT----C---C-----HHHHHHHHHHHTTSCTTCEEEES
T ss_pred ccCCccccc----c--CCccEEEEcccc----c---C-----chHHHHHHHHHHcCCCCcEEEEe
Confidence 999653221 1 269999996532 1 1 12345677889999999999875
No 125
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.25 E-value=3.3e-12 Score=102.78 Aligned_cols=98 Identities=16% Similarity=0.070 Sum_probs=72.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------CCCCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++ +. .-.++.++ .+|+.+..
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-~~d~~~~~----- 98 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYG-----------FEVVGVDISEDMIRKAREYAKSRESNVEFI-VGDARKLS----- 98 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTT-----------CEEEEEESCHHHHHHHHHHHHHTTCCCEEE-ECCTTSCC-----
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcC-----------CEEEEEECCHHHHHHHHHHHHhcCCCceEE-ECchhcCC-----
Confidence 3458899999999999999888763 3999999997 21 11568888 99987732
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
+++++||+|+++.... .. .......++..+.++|+|||.+++...
T Consensus 99 ---~~~~~~D~v~~~~~~~---~~------~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 99 ---FEDKTFDYVIFIDSIV---HF------EPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp ---SCTTCEEEEEEESCGG---GC------CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CCCCcEEEEEEcCchH---hC------CHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 4467899999975410 11 112345788999999999999988654
No 126
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.25 E-value=1.7e-11 Score=102.40 Aligned_cols=97 Identities=21% Similarity=0.191 Sum_probs=71.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------C-CCCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------P-IDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~-~~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++ +. . ..++.+. .+|+.+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~----------~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~----- 125 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD----------VNVVGLTLSKNQANHVQQLVANSENLRSKRVL-LAGWEQ----- 125 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC----------CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEE-ESCGGG-----
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC----------CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEE-ECChhh-----
Confidence 46789999999999999999997764 4999999996 21 1 1367788 888754
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
++ ++||+|++.......+. .....++.++.++|||||.+++..+.
T Consensus 126 -----~~-~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 126 -----FD-EPVDRIVSIGAFEHFGH---------ERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp -----CC-CCCSEEEEESCGGGTCT---------TTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred -----CC-CCeeEEEEeCchhhcCh---------HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 33 78999999654311110 12356788999999999999987644
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.25 E-value=1.1e-11 Score=100.80 Aligned_cols=100 Identities=9% Similarity=0.033 Sum_probs=68.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--C-------C------CCCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--I-------Y------PIDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~-------~------~~~~~~~~~~~D~~~~~~ 124 (229)
+++.+|||||||+|.++..++++. +..+|+|+|+|+ | . .++++.+. ++|+.+..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~---------~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~-~~d~~~l~- 91 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND---------QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFV-IAAAESLP- 91 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC---------TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEE-CCBTTBCC-
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEE-EcCHHHhh-
Confidence 578899999999999999998753 567999999994 4 1 23467888 88887631
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
..+ ...+|.|.++++. ... ..........++.++.++|||||.|++
T Consensus 92 -----~~~-~d~v~~i~~~~~~-----~~~-~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 92 -----FEL-KNIADSISILFPW-----GTL-LEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp -----GGG-TTCEEEEEEESCC-----HHH-HHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred -----hhc-cCeEEEEEEeCCC-----cHH-hhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 111 1457777775531 000 001111123678999999999999988
No 128
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.25 E-value=6.9e-12 Score=100.73 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=70.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC-----CCeEEecCCCCChh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID-----GAVVLSKCDFTQPD 123 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~-----~~~~~~~~D~~~~~ 123 (229)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++ +. .+. ++.++ .+|+....
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~~ 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDK---------SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLF-QSSLVYRD 97 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTST---------TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEE-ECCSSSCC
T ss_pred cCCCEEEEecCCCCHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEE-eCcccccc
Confidence 467899999999999999988764 457999999996 21 011 68888 89986532
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
..+++||+|++..... ..+. .....+++.+.++|+|||.++...
T Consensus 98 --------~~~~~fD~V~~~~~l~-----~~~~----~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 98 --------KRFSGYDAATVIEVIE-----HLDE----NRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp --------GGGTTCSEEEEESCGG-----GCCH----HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred --------cccCCCCEEEEHHHHH-----hCCH----HHHHHHHHHHHHhhCCCEEEEEcc
Confidence 3356899999865431 1111 123578899999999999776543
No 129
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.25 E-value=1.8e-11 Score=98.26 Aligned_cols=98 Identities=14% Similarity=0.090 Sum_probs=71.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC-----CCeEEecCCCCChh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID-----GAVVLSKCDFTQPD 123 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~-----~~~~~~~~D~~~~~ 123 (229)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++ +. .++ ++.++ .+|+....
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~~ 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDS---------FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLI-QGALTYQD 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCT---------TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEE-ECCTTSCC
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhC---------CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEE-eCCccccc
Confidence 467899999999999999998864 456999999996 21 111 68888 89876532
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
...++||+|++..... ..+. .....+++.+.++|+|||.+++..
T Consensus 98 --------~~~~~fD~v~~~~~l~-----~~~~----~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 98 --------KRFHGYDAATVIEVIE-----HLDL----SRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp --------GGGCSCSEEEEESCGG-----GCCH----HHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred --------ccCCCcCEEeeHHHHH-----cCCH----HHHHHHHHHHHHHcCCCEEEEEcc
Confidence 2346899999966431 1111 223578889999999999877654
No 130
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=1e-11 Score=96.24 Aligned_cols=117 Identities=14% Similarity=0.081 Sum_probs=84.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
..++.+|||+|||+|.++..+++ . ..+|+|+|+++ + ..++++.++ .+|+.+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~-~----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-~~d~~~------ 94 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK-R----------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQII-KGRAED------ 94 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT-T----------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEE-ESCHHH------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-c----------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEE-ECCccc------
Confidence 35788999999999999999887 2 36999999996 2 123567788 787543
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhCCeeEEE
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFYSQVKIL 207 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F~~v~~~ 207 (229)
.++++.||+|+++.. . ....++..+.++ |||.+++.........++.+.++.....++..
T Consensus 95 ---~~~~~~~D~i~~~~~--------~-------~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 95 ---VLDKLEFNKAFIGGT--------K-------NIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ---HGGGCCCSEEEECSC--------S-------CHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ---cccCCCCcEEEECCc--------c-------cHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 244578999999764 1 123566667777 99999997766566677888888875566666
Q ss_pred cCCCCC
Q psy1489 208 KPPSSR 213 (229)
Q Consensus 208 kp~~sr 213 (229)
.+..++
T Consensus 155 ~~~~~~ 160 (183)
T 2yxd_A 155 NVFISY 160 (183)
T ss_dssp EEEEEE
T ss_pred Eeeeeh
Confidence 544433
No 131
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.25 E-value=6.4e-12 Score=96.87 Aligned_cols=115 Identities=14% Similarity=0.151 Sum_probs=82.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++ +. ..+++.+. .+| . .+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~-----------~~v~~vD~s~~~~~~a~~~~~~v~~~-~~d-~----------~~ 71 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA-----------TKLYCIDINVIALKEVKEKFDSVITL-SDP-K----------EI 71 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE-----------EEEEEECSCHHHHHHHHHHCTTSEEE-SSG-G----------GS
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc-----------CeEEEEeCCHHHHHHHHHhCCCcEEE-eCC-C----------CC
Confidence 4678899999999999999988763 3999999997 21 14578888 777 1 15
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC------------ChHHHHHHHHhh
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR------------NRPQLEESITRF 200 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~------------~~~~~~~~l~~~ 200 (229)
+++.||+|++....... .+ ...+++++.++|+|||.+++..+... ...++...++ -
T Consensus 72 ~~~~~D~v~~~~~l~~~----~~-------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-G 139 (170)
T 3i9f_A 72 PDNSVDFILFANSFHDM----DD-------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-N 139 (170)
T ss_dssp CTTCEEEEEEESCSTTC----SC-------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-T
T ss_pred CCCceEEEEEccchhcc----cC-------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-C
Confidence 57889999997654211 11 24678889999999999998765432 2456666666 5
Q ss_pred CCeeEEEc
Q psy1489 201 YSQVKILK 208 (229)
Q Consensus 201 F~~v~~~k 208 (229)
|..+.+..
T Consensus 140 f~~~~~~~ 147 (170)
T 3i9f_A 140 FVVEKRFN 147 (170)
T ss_dssp EEEEEEEC
T ss_pred cEEEEccC
Confidence 66555543
No 132
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.25 E-value=4.5e-12 Score=100.80 Aligned_cols=100 Identities=18% Similarity=0.054 Sum_probs=71.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------CCCCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
..++.+|||+|||+|.++..++... ..+|+|+|+++ +. .-.++.++ .+|+.+..
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-~~d~~~~~----- 84 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVED----------GYKTYGIEISDLQLKKAENFSRENNFKLNIS-KGDIRKLP----- 84 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHT----------TCEEEEEECCHHHHHHHHHHHHHHTCCCCEE-ECCTTSCC-----
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhC----------CCEEEEEECCHHHHHHHHHHHHhcCCceEEE-ECchhhCC-----
Confidence 4568899999999999865544443 36999999997 21 11357788 88887632
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
+++++||+|++..... ... ......++..+.++|+|||.+++..+.
T Consensus 85 ---~~~~~fD~v~~~~~l~-----~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 85 ---FKDESMSFVYSYGTIF-----HMR----KNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp ---SCTTCEEEEEECSCGG-----GSC----HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---CCCCceeEEEEcChHH-----hCC----HHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 4567899999965321 111 133567889999999999999987754
No 133
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.24 E-value=1.8e-11 Score=99.95 Aligned_cols=112 Identities=15% Similarity=0.282 Sum_probs=80.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++. + .+|+++|+++ + ..+ +++.+. .+|+.+..
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~----------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~--- 153 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-A----------GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFF-NVDFKDAE--- 153 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-S----------SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEE-CSCTTTSC---
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-C----------CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEE-EcChhhcc---
Confidence 457899999999999999999887 4 6999999996 1 122 467788 88887621
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhCCeeEE
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFYSQVKI 206 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F~~v~~ 206 (229)
++++.||+|+++.+. ...++..+.++|+|||.+++.........++...++..|..+..
T Consensus 154 -----~~~~~~D~v~~~~~~----------------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~f~~~~~ 212 (248)
T 2yvl_A 154 -----VPEGIFHAAFVDVRE----------------PWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENYFGNLEV 212 (248)
T ss_dssp -----CCTTCBSEEEECSSC----------------GGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTTEEEEEE
T ss_pred -----cCCCcccEEEECCcC----------------HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhhCCcceE
Confidence 145689999996531 12457778999999999998765443445555555444554443
No 134
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.24 E-value=1.2e-11 Score=100.28 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=72.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.++.+|||+|||+|.++..+++.. .+|+|+|+++ |. ..+++.++ .+|+.+.. +
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~-----------~~v~~~D~s~~~~~~a~~~~~~~~~~-~~d~~~~~--------~- 97 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF-----------GDTAGLELSEDMLTHARKRLPDATLH-QGDMRDFR--------L- 97 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH-----------SEEEEEESCHHHHHHHHHHCTTCEEE-ECCTTTCC--------C-
T ss_pred CCCCeEEEecccCCHHHHHHHHhC-----------CcEEEEeCCHHHHHHHHHhCCCCEEE-ECCHHHcc--------c-
Confidence 577899999999999999999875 3899999997 21 23568888 89987632 2
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
++.||+|+|.... ..+.........++..+.++|+|||.+++..+.
T Consensus 98 ~~~~D~v~~~~~~-------~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 98 GRKFSAVVSMFSS-------VGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp SSCEEEEEECTTG-------GGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred CCCCcEEEEcCch-------HhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 5689999963311 111111133467889999999999999997654
No 135
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.24 E-value=1.7e-11 Score=102.49 Aligned_cols=102 Identities=16% Similarity=0.051 Sum_probs=74.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++. +..+|+|+|+++ +. .. .++.++ .+|+.+..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~----------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~--- 127 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA----------GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFR-AQDSYGRH--- 127 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH----------TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEE-ESCTTTSC---
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEE-ECCccccc---
Confidence 467899999999999999998775 345999999996 21 11 246788 89988732
Q ss_pred HHHHHh-CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 127 RLVTIL-KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 127 ~i~~~~-~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
+ +++.||+|+++.... .. +........++.++.++|+|||.+++.+..
T Consensus 128 -----~~~~~~fD~v~~~~~l~-----~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 128 -----MDLGKEFDVISSQFSFH-----YA--FSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp -----CCCSSCEEEEEEESCGG-----GG--GSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -----cCCCCCcCEEEECchhh-----hh--cCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3 467899999976431 00 011234567899999999999999987644
No 136
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.24 E-value=9.6e-12 Score=102.44 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=70.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++ +. .+ .++.++ .+|+.+.
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~-~~d~~~~----- 127 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELP--------ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLR-EGPALQS----- 127 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSC--------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEE-ESCHHHH-----
T ss_pred cCCCEEEEecCCchHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-EcCHHHH-----
Confidence 4678999999999999999998763 368999999997 21 22 257888 8875441
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+......++||+|++|... . .....+..+.++|+|||.+++.
T Consensus 128 l~~~~~~~~fD~V~~d~~~-------~-------~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 128 LESLGECPAFDLIFIDADK-------P-------NNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp HHTCCSCCCCSEEEECSCG-------G-------GHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHhcCCCCCeEEEEECCch-------H-------HHHHHHHHHHHhcCCCeEEEEe
Confidence 2221123589999997742 1 1235678899999999999875
No 137
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.24 E-value=5.8e-12 Score=102.03 Aligned_cols=109 Identities=20% Similarity=0.209 Sum_probs=78.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
++++.+|||+|||+|.++..+++. + .+|+|+|+++ +. ..+++.++ .+|+.+. + .+
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~~-~~d~~~~-----~--~~ 106 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ-A----------ARWAAYDFSPELLKLARANAPHADVY-EWNGKGE-----L--PA 106 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG-S----------SEEEEEESCHHHHHHHHHHCTTSEEE-ECCSCSS-----C--CT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc-C----------CEEEEEECCHHHHHHHHHhCCCceEE-Ecchhhc-----c--CC
Confidence 467899999999999999998876 3 5999999997 21 24578999 9998542 1 13
Q ss_pred C-CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CCee
Q psy1489 133 K-DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YSQV 204 (229)
Q Consensus 133 ~-~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~~v 204 (229)
+ +++||+|+++..+ ..++..+.++|||||.++ ..........+...+... |..+
T Consensus 107 ~~~~~fD~v~~~~~~-----------------~~~l~~~~~~LkpgG~l~-~~~~~~~~~~~~~~l~~~Gf~~~ 162 (226)
T 3m33_A 107 GLGAPFGLIVSRRGP-----------------TSVILRLPELAAPDAHFL-YVGPRLNVPEVPERLAAVGWDIV 162 (226)
T ss_dssp TCCCCEEEEEEESCC-----------------SGGGGGHHHHEEEEEEEE-EEESSSCCTHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEEeCCCH-----------------HHHHHHHHHHcCCCcEEE-EeCCcCCHHHHHHHHHHCCCeEE
Confidence 4 6789999996321 245677999999999998 233334456677777664 4433
No 138
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.24 E-value=8.6e-12 Score=102.44 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=73.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC------------------CCCCCeEEecCCCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY------------------PIDGAVVLSKCDFT 120 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~------------------~~~~~~~~~~~D~~ 120 (229)
+++.+|||+|||+|.++..+++.. +...|+|+|+++ +. .+.++.++ .+|+.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~-~~D~~ 117 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF---------PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVL-RGNAM 117 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS---------TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEE-ECCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC---------CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEE-eccHH
Confidence 467899999999999999999875 567999999996 21 34678898 99987
Q ss_pred ChhHHHHHHHHhCCCCccEEEeCCCCCCCCC-CcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 121 QPDIQDRLVTILKDDKLDVVLSDMAPNATGM-REMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 121 ~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~-~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+. +...++.+.+|.|+...+...... +..... ....++..+.++|+|||.|++.+
T Consensus 118 ~~-----l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~----~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 118 KF-----LPNFFEKGQLSKMFFCFPDPHFKQRKHKARI----ITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp SC-----GGGTSCTTCEEEEEEESCCCC------CSSC----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HH-----HHHhccccccCEEEEECCCcccccchhHHhh----ccHHHHHHHHHHcCCCCEEEEEe
Confidence 62 223355778999987553211000 000000 01367888999999999999854
No 139
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.23 E-value=3.2e-12 Score=107.44 Aligned_cols=97 Identities=22% Similarity=0.155 Sum_probs=74.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++ +. .+ +++.++ .+|+.+..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~--- 145 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFG----------VSIDCLNIAPVQNKRNEEYNNQAGLADNITVK-YGSFLEIP--- 145 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC----------CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEE-ECCTTSCS---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC----------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEE-EcCcccCC---
Confidence 46789999999999999999998764 5999999997 21 12 468888 89988732
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
+++++||+|++...... ..+ ...++.++.++|||||.+++..+
T Consensus 146 -----~~~~~fD~v~~~~~l~~----~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 -----CEDNSYDFIWSQDAFLH----SPD-------KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp -----SCTTCEEEEEEESCGGG----CSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----CCCCCEeEEEecchhhh----cCC-------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 45678999999654311 111 35788999999999999998753
No 140
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.23 E-value=7.7e-11 Score=94.25 Aligned_cols=107 Identities=19% Similarity=0.217 Sum_probs=79.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccE
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDV 139 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~ 139 (229)
.++.+|||+|||+|.++..++ .+|+|+|+++. ++.+. .+|+.+.. ++++.||+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~--------------~~v~~~D~s~~----~~~~~-~~d~~~~~--------~~~~~fD~ 118 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR--------------NPVHCFDLASL----DPRVT-VCDMAQVP--------LEDESVDV 118 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC--------------SCEEEEESSCS----STTEE-ESCTTSCS--------CCTTCEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh--------------ccEEEEeCCCC----CceEE-EeccccCC--------CCCCCEeE
Confidence 567899999999999877652 48999999984 66777 88887732 45678999
Q ss_pred EEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC--CChHHHHHHHHhh-CCeeE
Q psy1489 140 VLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG--RNRPQLEESITRF-YSQVK 205 (229)
Q Consensus 140 V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~--~~~~~~~~~l~~~-F~~v~ 205 (229)
|++..... ..+ ...++.++.++|+|||.+++..+.. ....++...++.. |..+.
T Consensus 119 v~~~~~l~-----~~~-------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 119 AVFCLSLM-----GTN-------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp EEEESCCC-----SSC-------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEE
T ss_pred EEEehhcc-----ccC-------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEE
Confidence 99966542 112 3467888999999999999866543 3567788888776 65444
No 141
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.23 E-value=4.4e-12 Score=107.66 Aligned_cols=108 Identities=13% Similarity=0.051 Sum_probs=70.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC----------CC------CCeEEecCCCCCh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP----------ID------GAVVLSKCDFTQP 122 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~----------~~------~~~~~~~~D~~~~ 122 (229)
+++.+|||||||+|..+..++.. ..++|+|+|+|+ |.. .. .+.+. ..|+...
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~----------~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~-~~d~~~d 115 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG----------EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYI-QETIRSD 115 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEE-ECCTTSS
T ss_pred CCCCeEEEEecCCcHhHHHHHhc----------CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchh-hhhcccc
Confidence 45789999999999877665543 236899999997 311 11 14566 6776543
Q ss_pred hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 123 DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 123 ~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
.....+...+++++||+|+|..+... ..+.++ ...+++++.++|||||.|++.+..
T Consensus 116 ~~~~~l~~~~~~~~FD~V~~~~~lhy--~~~~~~------~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 116 TFVSSVREVFYFGKFNIIDWQFAIHY--SFHPRH------YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SHHHHHHTTCCSSCEEEEEEESCGGG--TCSTTT------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhhhhccccCCCeeEEEECchHHH--hCCHHH------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 22233443456789999998654310 001111 247899999999999999987653
No 142
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.23 E-value=2e-11 Score=100.48 Aligned_cols=141 Identities=18% Similarity=0.156 Sum_probs=91.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-------CCCC---------------------
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-------PIDG--------------------- 110 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-------~~~~--------------------- 110 (229)
.++.+|||+|||+|.++..++... ..+|+|+|+++ |. ....
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES----------FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMK 124 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT----------EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSC
T ss_pred cCCCEEEEECCCccHHHHHHhhcc----------cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccc
Confidence 467899999999999998887642 14899999996 21 1111
Q ss_pred -----------C-eEEecCCCCChhHHHHHHHHhCC---CCccEEEeCCCCCCCCCCcccHH-HHHHHHHHHHHHHHHcc
Q psy1489 111 -----------A-VVLSKCDFTQPDIQDRLVTILKD---DKLDVVLSDMAPNATGMREMDHD-LITQLAIAVIRFAVTYS 174 (229)
Q Consensus 111 -----------~-~~~~~~D~~~~~~~~~i~~~~~~---~~~D~V~sd~~~~~~g~~~~d~~-~~~~~~~~~l~~~~~~L 174 (229)
+ .++ .+|+.+... +++ ++||+|++.... .+. ........++..+.++|
T Consensus 125 ~~~~~~~l~~~v~~~~-~~d~~~~~~-------~~~~~~~~fD~v~~~~~l--------~~~~~~~~~~~~~l~~~~~~L 188 (265)
T 2i62_A 125 GPEKEEKLRRAIKQVL-KCDVTQSQP-------LGGVSLPPADCLLSTLCL--------DAACPDLPAYRTALRNLGSLL 188 (265)
T ss_dssp HHHHHHHHHHHEEEEE-ECCTTSSST-------TTTCCCCCEEEEEEESCH--------HHHCSSHHHHHHHHHHHHTTE
T ss_pred hHHHHHHhhhhheeEE-EeeeccCCC-------CCccccCCccEEEEhhhh--------hhhcCChHHHHHHHHHHHhhC
Confidence 5 777 888877421 223 789999996532 000 01234567899999999
Q ss_pred cCCCEEEEeecCC---------------CChHHHHHHHHhh-CCeeEEEcCCC--CC---CCCceEEEEeccC
Q psy1489 175 KPGADCLIKIWDG---------------RNRPQLEESITRF-YSQVKILKPPS--SR---SHSAELFLLGRGF 226 (229)
Q Consensus 175 kpgG~~v~~~~~~---------------~~~~~~~~~l~~~-F~~v~~~kp~~--sr---~~s~E~Y~v~~~~ 226 (229)
+|||.|++..... ....++...+... |..+.+..... .. ....-+|++|++.
T Consensus 189 kpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 189 KPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp EEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred CCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 9999999865321 1345777888776 76665553221 11 1234567777764
No 143
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.23 E-value=1.8e-11 Score=103.92 Aligned_cols=142 Identities=18% Similarity=0.067 Sum_probs=92.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------------CCCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------------PIDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------------~~~~~~~~~~~D~~~~~~ 124 (229)
+++.+|||||||+|.++..+++.. +..+|+++|+++ +. ..++++++ .+|+.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~-~~D~~~--- 160 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG---------TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR-VGDGLA--- 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-ESCHHH---
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE-ECcHHH---
Confidence 467899999999999999988753 456999999996 10 12457777 787543
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHH-HHHHHHHHHHcccCCCEEEEeecCC----CChHHHHHHHHh
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQL-AIAVIRFAVTYSKPGADCLIKIWDG----RNRPQLEESITR 199 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~-~~~~l~~~~~~LkpgG~~v~~~~~~----~~~~~~~~~l~~ 199 (229)
+.....+++||+|++|..... + . ...+ ....++.+.++|+|||.|++..... .....+...++.
T Consensus 161 ---~~~~~~~~~fDvIi~d~~~~~-~----~---~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 229 (304)
T 3bwc_A 161 ---FVRQTPDNTYDVVIIDTTDPA-G----P---ASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRE 229 (304)
T ss_dssp ---HHHSSCTTCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHH
T ss_pred ---HHHhccCCceeEEEECCCCcc-c----c---chhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHh
Confidence 111113678999999875310 0 0 0011 1467889999999999999865332 134667788888
Q ss_pred h-CCeeEEEcC-CCCCCCCceEEEEecc
Q psy1489 200 F-YSQVKILKP-PSSRSHSAELFLLGRG 225 (229)
Q Consensus 200 ~-F~~v~~~kp-~~sr~~s~E~Y~v~~~ 225 (229)
. |..+.+... ..+-+...-.|++|.+
T Consensus 230 ~GF~~v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 230 TGFASVQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp HTCSEEEEEECCCTTSTTSCCEEEEEES
T ss_pred CCCCcEEEEEeecccccCcceEEEEEeC
Confidence 8 988877643 2333333345666654
No 144
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.23 E-value=2.2e-12 Score=105.09 Aligned_cols=103 Identities=17% Similarity=0.107 Sum_probs=70.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------CCCCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
..++.+|||+|||+|.++..+++.. ..+|+|+|+++ |. .-.++.++ .+|+.+ +
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~-~~d~~~------~ 120 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP----------IDEHWIIECNDGVFQRLRDWAPRQTHKVIPL-KGLWED------V 120 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC----------EEEEEEEECCHHHHHHHHHHGGGCSSEEEEE-ESCHHH------H
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC----------CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEE-ecCHHH------h
Confidence 4578999999999999999986542 24899999997 31 11356777 787654 2
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
...+++++||+|++|.... ..... .......++.++.++|||||.|++..
T Consensus 121 ~~~~~~~~fD~V~~d~~~~--~~~~~----~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 121 APTLPDGHFDGILYDTYPL--SEETW----HTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp GGGSCTTCEEEEEECCCCC--BGGGT----TTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hcccCCCceEEEEECCccc--chhhh----hhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1235678999999953211 11111 12234567899999999999998653
No 145
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.23 E-value=6.8e-12 Score=104.01 Aligned_cols=97 Identities=18% Similarity=0.150 Sum_probs=73.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++ +. .+ .++.+. .+|+.+..
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~--- 124 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARD----------VRVTGISISRPQVNQANARATAAGLANRVTFS-YADAMDLP--- 124 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSC----------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ECCTTSCC---
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC----------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEE-ECccccCC---
Confidence 46789999999999999999998743 6999999996 21 12 357888 89987732
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
+++++||+|++...... ..+ ...++.++.++|+|||.+++..+
T Consensus 125 -----~~~~~fD~v~~~~~l~~----~~~-------~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 125 -----FEDASFDAVWALESLHH----MPD-------RGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp -----SCTTCEEEEEEESCTTT----SSC-------HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -----CCCCCccEEEEechhhh----CCC-------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 45678999998665421 112 24678899999999999998654
No 146
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.23 E-value=8e-12 Score=105.72 Aligned_cols=101 Identities=19% Similarity=0.116 Sum_probs=72.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC-CCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~-~~~~~~~~D~~~~~~~~ 126 (229)
++++.+|||+|||+|.++..++.... +..+|+|+|+++ +. ... ++.++ .+|+.+..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~--- 183 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSAC--------PGVQLVGIDYDPEALDGATRLAAGHALAGQITLH-RQDAWKLD--- 183 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTC--------TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE-ECCGGGCC---
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC--------CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEE-ECchhcCC---
Confidence 46789999999999999998853222 567999999996 21 111 37788 89877631
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
++ +.||+|+++.... +..+. .....++.++.++|+|||.+++..+
T Consensus 184 -----~~-~~fD~v~~~~~~~----~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 184 -----TR-EGYDLLTSNGLNI----YEPDD----ARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp -----CC-SCEEEEECCSSGG----GCCCH----HHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred -----cc-CCeEEEEECChhh----hcCCH----HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 33 7899999966421 11122 2234578899999999999998663
No 147
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.23 E-value=9.8e-12 Score=100.18 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=70.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++ + ..+. ++.++ .+|+.+. ...
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~--~~~ 125 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLS--------SGGRVVTLEASEKHADIARSNIERANLNDRVEVR-TGLALDS--LQQ 125 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC--------SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ESCHHHH--HHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-EcCHHHH--HHH
Confidence 4678999999999999999998763 367999999997 2 1233 47888 8886542 111
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.. ...+.||+|++|+.. . .....+..+.++|+|||.+++.
T Consensus 126 ~~~-~~~~~fD~v~~d~~~--------~------~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 126 IEN-EKYEPFDFIFIDADK--------Q------NNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HHH-TTCCCCSEEEECSCG--------G------GHHHHHHHHHHTCCTTCEEEEE
T ss_pred HHh-cCCCCcCEEEEcCCc--------H------HHHHHHHHHHHhcCCCcEEEEe
Confidence 111 112579999998752 1 1236778899999999998875
No 148
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.22 E-value=2.1e-11 Score=99.00 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=91.4
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------C---CCCCeEEecCCCCChhHHHHHH
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------P---IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~---~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.+|||+|||+|.++..+++. ..+|+|+|+++ +. . ..++.++ .+|+.+.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~-----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~------- 127 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP-----------ERFVVGLDISESALAKANETYGSSPKAEYFSFV-KEDVFTW------- 127 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT-----------TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEE-CCCTTTC-------
T ss_pred CCCEEEeCCCCCHHHHHHHhC-----------CCeEEEEECCHHHHHHHHHHhhccCCCcceEEE-ECchhcC-------
Confidence 459999999999999988653 36899999997 21 1 1247888 9998873
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC----------CChHHHHHHHHh
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG----------RNRPQLEESITR 199 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~----------~~~~~~~~~l~~ 199 (229)
.++..||+|++....... .. +....++..+.++|+|||.+++..+.. ....++...+..
T Consensus 128 --~~~~~fD~v~~~~~l~~~--~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 196 (235)
T 3lcc_A 128 --RPTELFDLIFDYVFFCAI--EP-------EMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVP 196 (235)
T ss_dssp --CCSSCEEEEEEESSTTTS--CG-------GGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGG
T ss_pred --CCCCCeeEEEEChhhhcC--CH-------HHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHH
Confidence 235689999996654211 10 123567889999999999999866542 135677788877
Q ss_pred h-CCeeEEEcCCCCC--CCCceEEEEeccC
Q psy1489 200 F-YSQVKILKPPSSR--SHSAELFLLGRGF 226 (229)
Q Consensus 200 ~-F~~v~~~kp~~sr--~~s~E~Y~v~~~~ 226 (229)
. |..+.+.....+- ....|.+...++.
T Consensus 197 ~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~~ 226 (235)
T 3lcc_A 197 IGFKAVSVEENPHAIPTRKGKEKLGRWKKI 226 (235)
T ss_dssp GTEEEEEEEECTTCCTTTTTSCEEEEEEES
T ss_pred cCCeEEEEEecCCccccccCHHHHhhhhhc
Confidence 6 7766655432222 2345666665543
No 149
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.22 E-value=1.3e-11 Score=104.69 Aligned_cols=114 Identities=15% Similarity=0.030 Sum_probs=76.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----------------CCCCCeEEecCCCCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----------------PIDGAVVLSKCDFTQ 121 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----------------~~~~~~~~~~~D~~~ 121 (229)
+++.+|||+|||+|.++..+++. +..+|+|+|+++ |. ...++.++ .+|+.+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~----------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~-~~D~~~ 101 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG----------RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFI-TADSSK 101 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEE-ECCTTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhc----------CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEE-Eecccc
Confidence 46789999999999999998874 346999999996 21 12257788 899877
Q ss_pred hhHHHHHHHHh--CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHH
Q psy1489 122 PDIQDRLVTIL--KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESIT 198 (229)
Q Consensus 122 ~~~~~~i~~~~--~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~ 198 (229)
.... ..+ ++++||+|++.... +.. +........++.++.++|+|||.|++.++.. ..+.+.+.
T Consensus 102 ~~~~----~~~~~~~~~fD~V~~~~~l-----~~~--~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~---~~l~~~~~ 166 (313)
T 3bgv_A 102 ELLI----DKFRDPQMCFDICSCQFVC-----HYS--FESYEQADMMLRNACERLSPGGYFIGTTPNS---FELIRRLE 166 (313)
T ss_dssp SCST----TTCSSTTCCEEEEEEETCG-----GGG--GGSHHHHHHHHHHHHTTEEEEEEEEEEEECH---HHHHHHHT
T ss_pred cchh----hhcccCCCCEEEEEEecch-----hhc--cCCHHHHHHHHHHHHHHhCCCcEEEEecCCh---HHHHHHHH
Confidence 3200 012 23589999996643 111 0112334578999999999999999877643 34444443
No 150
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.22 E-value=3.8e-12 Score=101.53 Aligned_cols=97 Identities=19% Similarity=0.110 Sum_probs=67.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCC--CCCeEEecCCCCChhHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPI--DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~--~~~~~~~~~D~~~~~~~~~ 127 (229)
++.+|||+|||+|.++..++.+. ..+|+|+|+++ | ..+ ++++++ .+|+.+.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~-~~d~~~~----- 116 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ----------AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVI-NQSSLDF----- 116 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT----------CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEE-CSCHHHH-----
T ss_pred CCCeEEEcCCccCHHHHHHHHcc----------CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEE-ECCHHHH-----
Confidence 57899999999999999877652 35899999996 2 123 467888 8875431
Q ss_pred HHHHhCCCC-ccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHH--HHcccCCCEEEEeecC
Q psy1489 128 LVTILKDDK-LDVVLSDMAPNATGMREMDHDLITQLAIAVIRFA--VTYSKPGADCLIKIWD 186 (229)
Q Consensus 128 i~~~~~~~~-~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~--~~~LkpgG~~v~~~~~ 186 (229)
...+.++. ||+|++|.+.. .+. ...++..+ .++|+|||.+++....
T Consensus 117 -~~~~~~~~~fD~I~~~~~~~------~~~------~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 117 -LKQPQNQPHFDVVFLDPPFH------FNL------AEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp -TTSCCSSCCEEEEEECCCSS------SCH------HHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred -HHhhccCCCCCEEEECCCCC------Ccc------HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 11122467 99999987631 111 23445555 6789999999986644
No 151
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.22 E-value=1e-11 Score=102.84 Aligned_cols=98 Identities=16% Similarity=0.187 Sum_probs=74.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++ +. ..+++.+. .+|+.+.. ++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~d~~~~~--------~~ 145 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL---------PEITTFGLDVSKVAIKAAAKRYPQVTFC-VASSHRLP--------FS 145 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC---------TTSEEEEEESCHHHHHHHHHHCTTSEEE-ECCTTSCS--------BC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC---------CCCeEEEEeCCHHHHHHHHHhCCCcEEE-EcchhhCC--------CC
Confidence 578899999999999999998875 346999999997 21 23567888 88887632 45
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHH
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQL 193 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~ 193 (229)
+++||+|++...+ ..+.++.++|+|||.+++.........++
T Consensus 146 ~~~fD~v~~~~~~------------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~ 187 (269)
T 1p91_A 146 DTSMDAIIRIYAP------------------CKAEELARVVKPGGWVITATPGPRHLMEL 187 (269)
T ss_dssp TTCEEEEEEESCC------------------CCHHHHHHHEEEEEEEEEEEECTTTTHHH
T ss_pred CCceeEEEEeCCh------------------hhHHHHHHhcCCCcEEEEEEcCHHHHHHH
Confidence 6789999986542 13677899999999999977665554443
No 152
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.22 E-value=1.6e-11 Score=102.58 Aligned_cols=95 Identities=17% Similarity=0.234 Sum_probs=71.2
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
++.+|||+|||+|.++..+++. + .+|+|+|+++ +. .+ +++.++ .+|+.+..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~----- 130 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER-G----------HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFI-HCAAQDVA----- 130 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEE-ESCGGGTG-----
T ss_pred CCCEEEEeCCcchHHHHHHHHC-C----------CEEEEEECCHHHHHHHHHHHHhcCCCcceEEE-EcCHHHhh-----
Confidence 4689999999999999998876 3 5999999997 21 12 467788 89887632
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
.+.+++||+|++...... ..+ ...++.++.++|+|||.+++..+
T Consensus 131 --~~~~~~fD~v~~~~~l~~----~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 131 --SHLETPVDLILFHAVLEW----VAD-------PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp --GGCSSCEEEEEEESCGGG----CSC-------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred --hhcCCCceEEEECchhhc----ccC-------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 135689999999764311 111 24688999999999999998664
No 153
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.21 E-value=2.4e-11 Score=104.70 Aligned_cols=119 Identities=19% Similarity=0.166 Sum_probs=83.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.++.+|||+|||+|.++..+++.. +..+|+|+|+++ +. .-....++ .+|+.+
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~---------~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~-~~d~~~-------- 256 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHS---------PKIRLTLCDVSAPAVEASRATLAANGVEGEVF-ASNVFS-------- 256 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHC---------TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEE-ECSTTT--------
T ss_pred CCCCeEEEecCccCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEE-Eccccc--------
Confidence 356799999999999999999874 556999999997 21 11125667 788765
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhCCeeEEE
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFYSQVKIL 207 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F~~v~~~ 207 (229)
..+++||+|+++.+... +. .........++..+.++|+|||.+++......... ..+...|..+...
T Consensus 257 --~~~~~fD~Iv~~~~~~~-g~-----~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~l~~~f~~~~~~ 323 (343)
T 2pjd_A 257 --EVKGRFDMIISNPPFHD-GM-----QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYP---DVLDETFGFHEVI 323 (343)
T ss_dssp --TCCSCEEEEEECCCCCS-SS-----HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHH---HHHHHHHSCCEEE
T ss_pred --cccCCeeEEEECCCccc-Cc-----cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcH---HHHHHhcCceEEE
Confidence 22568999999876421 11 12234456889999999999999998765544333 4455556666544
No 154
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.21 E-value=6.2e-11 Score=99.18 Aligned_cols=108 Identities=15% Similarity=0.140 Sum_probs=76.0
Q ss_pred CCCeeEeecCCC---CchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CCCCCeEEecCCCCChhHH---
Q psy1489 61 PGLKVLDCGAAP---GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PIDGAVVLSKCDFTQPDIQ--- 125 (229)
Q Consensus 61 ~g~~VLDlGcGp---G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~~~~~~~~~~D~~~~~~~--- 125 (229)
...+|||||||+ |.++..+.+.. +..+|+++|+++ |. ...++.++ .+|+.+....
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~---------p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~-~~D~~~~~~~~~~ 146 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN---------PDARVVYVDIDPMVLTHGRALLAKDPNTAVF-TADVRDPEYILNH 146 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC---------TTCEEEEEESSHHHHHHHHHHHTTCTTEEEE-ECCTTCHHHHHHS
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC---------CCCEEEEEECChHHHHHHHHhcCCCCCeEEE-EeeCCCchhhhcc
Confidence 347999999999 99887766553 568999999997 31 22568899 9999986422
Q ss_pred HHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC
Q psy1489 126 DRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
..+.+.++...||+|++..... ..+. +....+++++.++|+|||.|++..+..
T Consensus 147 ~~~~~~~d~~~~d~v~~~~vlh-----~~~d----~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 147 PDVRRMIDFSRPAAIMLVGMLH-----YLSP----DVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHCCTTSCCEEEETTTGG-----GSCT----TTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred chhhccCCCCCCEEEEEechhh-----hCCc----HHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 1111335446899999976431 1111 113578899999999999999887654
No 155
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.21 E-value=2.3e-11 Score=102.44 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=70.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CC-----CCCeEEecCCCCChhHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PI-----DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~-----~~~~~~~~~D~~~~~~~~ 126 (229)
++.+|||||||+|.++..+++. + .+|+|+|+++ +. .. .++.++ ++|+.+..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~-~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~-~~d~~~~~--- 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL-G----------WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLV-QGDMSAFA--- 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT-T----------CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEE-ECBTTBCC---
T ss_pred CCCcEEEEeccCCHHHHHHHHc-C----------CeEEEEECCHHHHHHHHHHHhhcccccccceEEE-eCchhcCC---
Confidence 3459999999999999998875 2 5899999997 21 11 457888 99988732
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
+ ++.||+|++.... .+..+. +....++..+.++|+|||.|++.++.
T Consensus 147 -----~-~~~fD~v~~~~~~----~~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 147 -----L-DKRFGTVVISSGS----INELDE----ADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp -----C-SCCEEEEEECHHH----HTTSCH----HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----c-CCCcCEEEECCcc----cccCCH----HHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 2 5789999973210 011111 23467889999999999999987654
No 156
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.20 E-value=3.9e-10 Score=99.18 Aligned_cols=123 Identities=19% Similarity=0.103 Sum_probs=83.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC-CCCCeEEecCCCCChhHHHHHHHHhCCCCc
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP-IDGAVVLSKCDFTQPDIQDRLVTILKDDKL 137 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~-~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~ 137 (229)
.++.+|||+|||+|.++..++++.+ +..+++|+|+++ +.. ..++.++ ++|+.+. ...+.|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~--------~~~~i~gvDi~~~~~~~a~~~~~~-~~D~~~~---------~~~~~f 99 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHG--------TAYRFVGVEIDPKALDLPPWAEGI-LADFLLW---------EPGEAF 99 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHC--------SCSEEEEEESCTTTCCCCTTEEEE-ESCGGGC---------CCSSCE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhC--------CCCeEEEEECCHHHHHhCCCCcEE-eCChhhc---------CccCCC
Confidence 3567999999999999999998864 346999999998 222 2467888 8887652 234689
Q ss_pred cEEEeCCCCCCCCCC------cccHHHH-H-----------HHHHHHHHHHHHcccCCCEEEEeecC----CCChHHHHH
Q psy1489 138 DVVLSDMAPNATGMR------EMDHDLI-T-----------QLAIAVIRFAVTYSKPGADCLIKIWD----GRNRPQLEE 195 (229)
Q Consensus 138 D~V~sd~~~~~~g~~------~~d~~~~-~-----------~~~~~~l~~~~~~LkpgG~~v~~~~~----~~~~~~~~~ 195 (229)
|+|++|++....+.. ..+.... . .+....+..+.++|+|||.+++.+.. ......+.+
T Consensus 100 D~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~ 179 (421)
T 2ih2_A 100 DLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLRE 179 (421)
T ss_dssp EEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHH
T ss_pred CEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHH
Confidence 999999875332220 0111111 0 02236688899999999999886643 234566776
Q ss_pred HHHhh
Q psy1489 196 SITRF 200 (229)
Q Consensus 196 ~l~~~ 200 (229)
.+...
T Consensus 180 ~l~~~ 184 (421)
T 2ih2_A 180 FLARE 184 (421)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66554
No 157
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.20 E-value=4.5e-11 Score=101.49 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=73.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++..+ .+|+|+|+++ +. .+ +++.+. .+|+.+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~----- 151 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFD----------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVL-LQGWED----- 151 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC----------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEE-ESCGGG-----
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCC----------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE-ECChHH-----
Confidence 45789999999999999999998764 5999999996 21 12 347788 888755
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR 188 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~ 188 (229)
++ +.||+|++.......+. .....++.++.++|+|||.+++..+...
T Consensus 152 -----~~-~~fD~v~~~~~l~~~~~---------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 152 -----FA-EPVDRIVSIEAFEHFGH---------ENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp -----CC-CCCSEEEEESCGGGTCG---------GGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred -----CC-CCcCEEEEeChHHhcCH---------HHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 33 68999999654311110 1245788899999999999998776543
No 158
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.20 E-value=3.2e-11 Score=104.31 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=70.3
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CCC-CCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PID-GAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~~-~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++. +..+|+|+|+++|. .+. .+.++ .+|+.+..
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~----------g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~-~~d~~~~~----- 128 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA----------GARKVIGIECSSISDYAVKIVKANKLDHVVTII-KGKVEEVE----- 128 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT----------TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEE-ESCTTTCC-----
T ss_pred CCCCEEEEEeccchHHHHHHHHC----------CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEE-ECcHHHcc-----
Confidence 46889999999999999998876 34699999999731 122 37888 99988732
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
+++++||+|+++...... ... .....++..+.++|||||.++.
T Consensus 129 ---~~~~~fD~Iis~~~~~~l-~~~-------~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 129 ---LPVEKVDIIISEWMGYCL-FYE-------SMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ---CSSSCEEEEEECCCBBTB-TBT-------CCHHHHHHHHHHHEEEEEEEES
T ss_pred ---CCCCceEEEEEccccccc-cCc-------hhHHHHHHHHHHhCCCCCEEcc
Confidence 456899999997532110 011 1234677888999999999873
No 159
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.19 E-value=1.1e-11 Score=101.97 Aligned_cols=94 Identities=16% Similarity=0.068 Sum_probs=71.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------CCCCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++ |. ..+++.+. .+|+.+..
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-~~d~~~~~----- 99 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR-G----------YRYIALDADAAMLEVFRQKIAGVDRKVQVV-QADARAIP----- 99 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT-T----------CEEEEEESCHHHHHHHHHHTTTSCTTEEEE-ESCTTSCC-----
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC-C----------CEEEEEECCHHHHHHHHHHhhccCCceEEE-EcccccCC-----
Confidence 467899999999999999998875 2 5899999996 21 13578888 89987632
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+++++||+|++..... ..+ ....++.++.++|+|||.+++.
T Consensus 100 ---~~~~~fD~v~~~~~l~-----~~~------~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 ---LPDESVHGVIVVHLWH-----LVP------DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ---SCTTCEEEEEEESCGG-----GCT------THHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCCeeEEEECCchh-----hcC------CHHHHHHHHHHHCCCCcEEEEE
Confidence 4567899999965431 111 1346788899999999999886
No 160
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.19 E-value=1.2e-11 Score=103.70 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=73.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
+.++.+|||+|||+|.++..+++..+ +..+|+|+|+++ +. .. .++.+. .+|+.+..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~-~~d~~~~~----- 85 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLP--------EGSKYTGIDSGETLLAEARELFRLLPYDSEFL-EGDATEIE----- 85 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSC--------TTCEEEEEESCHHHHHHHHHHHHSSSSEEEEE-ESCTTTCC-----
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEE-EcchhhcC-----
Confidence 45789999999999999999988762 247999999997 21 11 268888 99988732
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
+ +++||+|++...... ..+ ...++.++.++|+|||.+++...
T Consensus 86 ---~-~~~fD~v~~~~~l~~----~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 86 ---L-NDKYDIAICHAFLLH----MTT-------PETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp ---C-SSCEEEEEEESCGGG----CSS-------HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ---c-CCCeeEEEECChhhc----CCC-------HHHHHHHHHHHcCCCCEEEEEec
Confidence 2 468999999764311 111 24788899999999999997654
No 161
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.19 E-value=1.1e-11 Score=100.00 Aligned_cols=96 Identities=11% Similarity=0.067 Sum_probs=69.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++ + ..+. .++++ .+|+.+.
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~----- 128 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALP--------KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLR-LSPAKDT----- 128 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC--------TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ESCHHHH-----
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCC--------CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEE-eCCHHHH-----
Confidence 4678999999999999999998763 368999999996 2 1222 47888 8875431
Q ss_pred HHHHhCC---CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKD---DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~---~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+...... ++||+|++|... ......+..+.++|+|||.+++.
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~~--------------~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDADK--------------ANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSCG--------------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhhhccCCCCccEEEECCCH--------------HHHHHHHHHHHHhcCCCcEEEEe
Confidence 2221111 689999997642 11235778899999999999885
No 162
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.19 E-value=6.7e-11 Score=101.93 Aligned_cols=96 Identities=24% Similarity=0.269 Sum_probs=70.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++. +..+|+|+|+++|. .. +++.++ .+|+.+..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~----------g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~---- 126 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA----------GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLI-KGKIEEVH---- 126 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT----------TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEE-ESCTTTSC----
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc----------CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEE-EeeHHHhc----
Confidence 356889999999999999998875 23599999999741 12 467888 99988732
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEE
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCL 181 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v 181 (229)
+++++||+|+++..+.. .... .....++..+.++|||||.++
T Consensus 127 ----~~~~~~D~Ivs~~~~~~--l~~~------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 ----LPVEKVDVIISEWMGYF--LLFE------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ----CSCSCEEEEEECCCBTT--BTTT------CHHHHHHHHHHHHEEEEEEEE
T ss_pred ----CCCCcEEEEEEcCchhh--ccCH------HHHHHHHHHHHhhcCCCcEEE
Confidence 45578999999763211 1111 123467888899999999987
No 163
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.19 E-value=1.1e-10 Score=96.75 Aligned_cols=102 Identities=20% Similarity=0.234 Sum_probs=70.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-------C----------CC-CCCeEEecCC-C
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-------Y----------PI-DGAVVLSKCD-F 119 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-------~----------~~-~~~~~~~~~D-~ 119 (229)
+.++.+|||+|||+|.++..++++.+ +.++|+|+|+++. . .+ +++.++ .+| +
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g--------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~ 111 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVG--------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVH-FNTNL 111 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC--------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEE-CSCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEE-ECChh
Confidence 46789999999999999999999875 5579999999972 1 11 357788 887 3
Q ss_pred CChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 120 TQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
.... ..+++++||+|++...... ..+. ..++..+..+++|||.+++..+.
T Consensus 112 ~~~~------~~~~~~~fD~v~~~~~l~~----~~~~-------~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 112 SDDL------GPIADQHFDRVVLAHSLWY----FASA-------NALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp TTCC------GGGTTCCCSEEEEESCGGG----SSCH-------HHHHHHHHHHTTTCSEEEEEEEC
T ss_pred hhcc------CCCCCCCEEEEEEccchhh----CCCH-------HHHHHHHHHHhCCCCEEEEEEec
Confidence 3211 1145678999999764311 1111 23455566677779999986544
No 164
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.18 E-value=6.3e-11 Score=104.03 Aligned_cols=120 Identities=19% Similarity=0.158 Sum_probs=78.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.++|.+|||+|||+|+++..++.. + ..|+|+|+++ +. .+. ..+. ++|+.+.
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~-g----------a~V~avDis~~al~~a~~n~~~ng~~-~~~~-~~D~~~~----- 273 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARK-G----------AYALAVDKDLEALGVLDQAALRLGLR-VDIR-HGEALPT----- 273 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHHHTCC-CEEE-ESCHHHH-----
T ss_pred hcCCCeEEEcccchhHHHHHHHHc-C----------CeEEEEECCHHHHHHHHHHHHHhCCC-CcEE-EccHHHH-----
Confidence 456999999999999999999875 3 3599999997 21 112 2455 6665431
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC-CChHHHHHHHHhh
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG-RNRPQLEESITRF 200 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~-~~~~~~~~~l~~~ 200 (229)
+ ..+.+. ||+|++|++.... ...+..........++..+.++|+|||.+++..... ...+.+.+.+...
T Consensus 274 l-~~~~~~-fD~Ii~dpP~f~~--~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a 343 (393)
T 4dmg_A 274 L-RGLEGP-FHHVLLDPPTLVK--RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRA 343 (393)
T ss_dssp H-HTCCCC-EEEEEECCCCCCS--SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred H-HHhcCC-CCEEEECCCcCCC--CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 2 223344 9999999753221 122344444556688999999999999998655443 3445555555443
No 165
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.18 E-value=3.5e-10 Score=92.95 Aligned_cols=148 Identities=11% Similarity=0.006 Sum_probs=90.1
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~~~i 128 (229)
++.+|||+|||+|.++..++.+. +..+|+|+|+++ | ..+. +++++ ++|+.+. +
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~-----~ 129 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL---------NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVV-KVPQKTL-----L 129 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH---------HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ECCTTCS-----S
T ss_pred CCCEEEEeCCChhHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEE-Ecchhhh-----h
Confidence 57899999999999999999876 347999999997 2 1233 37888 8886651 0
Q ss_pred HHHhC---CCCccEEEeCCCCCCCCC--Ccc--------c---HH-----------HHHHHHHHHHHHHHHcccCCCEEE
Q psy1489 129 VTILK---DDKLDVVLSDMAPNATGM--REM--------D---HD-----------LITQLAIAVIRFAVTYSKPGADCL 181 (229)
Q Consensus 129 ~~~~~---~~~~D~V~sd~~~~~~g~--~~~--------d---~~-----------~~~~~~~~~l~~~~~~LkpgG~~v 181 (229)
...++ +++||+|++|++....+. ... + .. ..+......+..+.++|+++|.+.
T Consensus 130 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~ 209 (254)
T 2h00_A 130 MDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYS 209 (254)
T ss_dssp TTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEE
T ss_pred hhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEE
Confidence 01133 258999999976432220 000 0 00 111223345555667788888877
Q ss_pred EeecCCCChHHHHHHHHhh-CCeeEEEcCCCCCCCCceEEEEeccC
Q psy1489 182 IKIWDGRNRPQLEESITRF-YSQVKILKPPSSRSHSAELFLLGRGF 226 (229)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~-F~~v~~~kp~~sr~~s~E~Y~v~~~~ 226 (229)
+.+-......++.+.++.. |..+++..... +..-.++|+-.|
T Consensus 210 ~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~---g~~~~~~~~w~~ 252 (254)
T 2h00_A 210 CMLGKKCSLAPLKEELRIQGVPKVTYTEFCQ---GRTMRWALAWSF 252 (254)
T ss_dssp EEESSTTSHHHHHHHHHHTTCSEEEEEEEEE---TTEEEEEEEEES
T ss_pred ECCCChhHHHHHHHHHHHcCCCceEEEEEec---CCceEEEEEeec
Confidence 6554444456777778776 88877664322 234444555443
No 166
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.18 E-value=4.5e-11 Score=92.74 Aligned_cols=99 Identities=17% Similarity=0.088 Sum_probs=67.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++. +..+|+|+|+++ +. .+ .++.++ .+|+.+.
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~----- 93 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR----------GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLL-KMEAERA----- 93 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT----------TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEE-CSCHHHH-----
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc----------CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE-ECcHHHh-----
Confidence 46789999999999999998875 246999999996 21 12 247787 7876541
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHH--HcccCCCEEEEeecCCC
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAV--TYSKPGADCLIKIWDGR 188 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~--~~LkpgG~~v~~~~~~~ 188 (229)
+ . ..++.||+|++|.+. +.. .....+..+. ++|+|||.+++......
T Consensus 94 ~-~-~~~~~fD~i~~~~~~---------~~~---~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 94 I-D-CLTGRFDLVFLDPPY---------AKE---TIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp H-H-HBCSCEEEEEECCSS---------HHH---HHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred H-H-hhcCCCCEEEECCCC---------Ccc---hHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 1 1 124579999998642 111 1233444444 99999999998775544
No 167
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.18 E-value=1.4e-11 Score=100.30 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=70.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++.. +.++|+++|+++ + ..+ +++.++ .+|+.+.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~----- 134 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASIS---------DDIHVTTIERNETMIQYAKQNLATYHFENQVRII-EGNALEQ----- 134 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTC---------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEE-ESCGGGC-----
T ss_pred cCCCEEEEEeCchhHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-ECCHHHH-----
Confidence 467899999999999999999843 568999999996 2 122 368888 8988662
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+...+ +++||+|++|.... . ....+..+.++|+|||.+++.
T Consensus 135 ~~~~~-~~~fD~V~~~~~~~--------~------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 135 FENVN-DKVYDMIFIDAAKA--------Q------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp HHHHT-TSCEEEEEEETTSS--------S------HHHHHHHHGGGEEEEEEEEEE
T ss_pred HHhhc-cCCccEEEEcCcHH--------H------HHHHHHHHHHhcCCCeEEEEe
Confidence 11012 57899999986431 1 235778899999999999873
No 168
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.18 E-value=3.8e-11 Score=98.30 Aligned_cols=96 Identities=16% Similarity=0.107 Sum_probs=68.9
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+++.+|||+|||+|.++..+++. + .+|+|+|+++ |. .-.++.++ ++|+.+..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~-~----------~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~-~~d~~~~~------ 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER-G----------YEVVGLDLHEEMLRVARRKAKERNLKIEFL-QGDVLEIA------ 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHHTTCCCEEE-ESCGGGCC------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC-C----------CeEEEEECCHHHHHHHHHHHHhcCCceEEE-ECChhhcc------
Confidence 56789999999999999998875 3 5899999997 21 01257888 88877621
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+ +++||+|++.... ....+ ......++..+.++|+|||.+++.+
T Consensus 102 --~-~~~fD~v~~~~~~----~~~~~----~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 --F-KNEFDAVTMFFST----IMYFD----EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp --C-CSCEEEEEECSSG----GGGSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --c-CCCccEEEEcCCc----hhcCC----HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 2 3579999985321 01111 1235678899999999999998753
No 169
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.17 E-value=3.1e-11 Score=100.93 Aligned_cols=93 Identities=19% Similarity=0.166 Sum_probs=69.2
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
++.+|||+|||+|.++..+++. + .+|+|+|+++ +. .+ ++.++ .+|+.+..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g----------~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~-~~d~~~~~------ 180 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-G----------YDVTSWDHNENSIAFLNETKEKENL-NISTA-LYDINAAN------ 180 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHHTTC-CEEEE-ECCGGGCC------
T ss_pred CCCcEEEECCCCCHHHHHHHHC-C----------CeEEEEECCHHHHHHHHHHHHHcCC-ceEEE-Eecccccc------
Confidence 6789999999999999998876 3 5999999997 21 12 67888 88877631
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
. ++.||+|+++..... .+. .....++..+.++|+|||.+++..
T Consensus 181 --~-~~~fD~i~~~~~~~~-----~~~----~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 181 --I-QENYDFIVSTVVFMF-----LNR----ERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp --C-CSCEEEEEECSSGGG-----SCG----GGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --c-cCCccEEEEccchhh-----CCH----HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 678999999764311 111 223468889999999999977654
No 170
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.17 E-value=4.4e-11 Score=102.78 Aligned_cols=123 Identities=16% Similarity=0.042 Sum_probs=79.3
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC--CCeEEecCCCCChhHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID--GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~--~~~~~~~~D~~~~~~~~ 126 (229)
.++.+|||+|||+|.++..++.. + .+|+|||+++ + ..+. ++.++ ++|+.+.
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-g----------a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i-~~D~~~~---- 215 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-G----------AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWI-CEDAMKF---- 215 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-T----------CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEE-CSCHHHH----
T ss_pred CCCCcEEEcccccCHHHHHHHHc-C----------CEEEEEECCHHHHHHHHHHHHHcCCCccceEEE-ECcHHHH----
Confidence 36789999999999999999874 2 3999999997 2 1233 37888 8886552
Q ss_pred HHHHH-hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC--ChHHHHHHHHhh
Q psy1489 127 RLVTI-LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR--NRPQLEESITRF 200 (229)
Q Consensus 127 ~i~~~-~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~--~~~~~~~~l~~~ 200 (229)
+... ..+++||+|++|++....+.. .+.+........++..+.++|+|||.|++...... ....+.+.++..
T Consensus 216 -l~~~~~~~~~fD~Ii~dPP~~~~~~~-~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a 290 (332)
T 2igt_A 216 -IQREERRGSTYDIILTDPPKFGRGTH-GEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRET 290 (332)
T ss_dssp -HHHHHHHTCCBSEEEECCCSEEECTT-CCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHH
T ss_pred -HHHHHhcCCCceEEEECCccccCCch-HHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHH
Confidence 1111 114689999999863111100 00011223445788889999999999776554332 345566666644
No 171
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.17 E-value=3.5e-11 Score=95.25 Aligned_cols=96 Identities=16% Similarity=0.123 Sum_probs=70.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----C----CCCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----P----IDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~----~~~~~~~~~~D~~~~~~~~~i 128 (229)
++++ +|||+|||+|.++..+++. + .+|+|+|+++ +. . -.++.+. .+|+.+..
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-~~d~~~~~----- 89 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL-G----------YEVTAVDQSSVGLAKAKQLAQEKGVKITTV-QSNLADFD----- 89 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT-T----------CEEEEECSSHHHHHHHHHHHHHHTCCEEEE-CCBTTTBS-----
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC-C----------CeEEEEECCHHHHHHHHHHHHhcCCceEEE-EcChhhcC-----
Confidence 4567 9999999999999888865 2 5999999997 21 0 1267788 88887732
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
++++.||+|++.... . . ......++..+.++|+|||.+++..+.
T Consensus 90 ---~~~~~fD~v~~~~~~------~-~----~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 90 ---IVADAWEGIVSIFCH------L-P----SSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp ---CCTTTCSEEEEECCC------C-C----HHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred ---CCcCCccEEEEEhhc------C-C----HHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 446789999995321 1 1 123457889999999999999987643
No 172
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.17 E-value=5.2e-11 Score=100.16 Aligned_cols=137 Identities=19% Similarity=0.268 Sum_probs=84.9
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~~~i 128 (229)
++.+|||+|||+|.++..++.. + ..+|+|+|+++ + ..+. ++.++ ++|+.+.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~---------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~-~~D~~~~------ 185 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S---------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVR-KGEFLEP------ 185 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S---------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEE-ESSTTGG------
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C---------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE-ECcchhh------
Confidence 5679999999999999999987 3 46999999996 2 1233 38888 9998873
Q ss_pred HHHhCCCCc---cEEEeCCCCCCCCC---Cc--ccHHHHH---HHHHHHHHHHH-HcccCCCEEEEeecCCCChHHHHHH
Q psy1489 129 VTILKDDKL---DVVLSDMAPNATGM---RE--MDHDLIT---QLAIAVIRFAV-TYSKPGADCLIKIWDGRNRPQLEES 196 (229)
Q Consensus 129 ~~~~~~~~~---D~V~sd~~~~~~g~---~~--~d~~~~~---~~~~~~l~~~~-~~LkpgG~~v~~~~~~~~~~~~~~~ 196 (229)
++ ++| |+|++|++....+. .+ .+....+ ......++.+. +.|+|||.+++.+.. .....+.+.
T Consensus 186 ---~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~-~q~~~v~~~ 260 (284)
T 1nv8_A 186 ---FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE-DQVEELKKI 260 (284)
T ss_dssp ---GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT-TCHHHHTTT
T ss_pred ---cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc-hHHHHHHHH
Confidence 21 368 99999865321110 00 1110000 00115678888 999999999986543 333344443
Q ss_pred HHhhCCeeEEEcCCCCCCCCceEEEEeccCC
Q psy1489 197 ITRFYSQVKILKPPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 197 l~~~F~~v~~~kp~~sr~~s~E~Y~v~~~~~ 227 (229)
+.. ..+.++-+.+ +.++++...+
T Consensus 261 ~~~----~~~~~D~~g~----~R~~~~~~k~ 283 (284)
T 1nv8_A 261 VSD----TVFLKDSAGK----YRFLLLNRRS 283 (284)
T ss_dssp STT----CEEEECTTSS----EEEEEEECCC
T ss_pred HHh----CCeecccCCC----ceEEEEEEcc
Confidence 333 2666664333 4555555443
No 173
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.16 E-value=8.5e-11 Score=98.51 Aligned_cols=92 Identities=20% Similarity=0.137 Sum_probs=70.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CCCC-CCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YPID-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~~~-~~~~~~~~D~~~~~~~~ 126 (229)
+++|.+|||+|||+|.++..+|.+ +.++|+|+|++|. ..+. .+.++ ++|..+.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~----------g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~-~~D~~~~---- 187 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY----------GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAY-NMDNRDF---- 187 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH----------TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE-CSCTTTC----
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh----------cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-eCcHHHh----
Confidence 578999999999999999999876 3469999999972 1233 47788 8998762
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
...+.||.|+++.++.. ...+..+.++|++||.+.+..+
T Consensus 188 -----~~~~~~D~Vi~~~p~~~---------------~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 188 -----PGENIADRILMGYVVRT---------------HEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp -----CCCSCEEEEEECCCSSG---------------GGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----ccccCCCEEEECCCCcH---------------HHHHHHHHHHcCCCCEEEEEee
Confidence 34678999999876521 1345668889999999876554
No 174
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.15 E-value=1.4e-11 Score=99.47 Aligned_cols=94 Identities=19% Similarity=0.277 Sum_probs=70.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------C-------CCCCeEEecCCCCCh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------P-------IDGAVVLSKCDFTQP 122 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~-------~~~~~~~~~~D~~~~ 122 (229)
++++.+|||+|||+|.++..+++..+ +.++|+|+|+++ +. . ..++.++ .+|+.+.
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~ 145 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVG--------CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLV-VGDGRMG 145 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEE-ESCGGGC
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhC--------CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEE-ECCcccC
Confidence 56789999999999999999998875 557999999996 21 0 2467788 8887642
Q ss_pred hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 123 DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 123 ~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
. ..+..||+|+++.... .++..+.++|+|||.+++.+..
T Consensus 146 ~--------~~~~~fD~i~~~~~~~-----------------~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 146 Y--------AEEAPYDAIHVGAAAP-----------------VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp C--------GGGCCEEEEEECSBBS-----------------SCCHHHHHTEEEEEEEEEEESC
T ss_pred c--------ccCCCcCEEEECCchH-----------------HHHHHHHHhcCCCcEEEEEEec
Confidence 1 2246799999977531 1234578999999999987654
No 175
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.14 E-value=1.2e-10 Score=101.74 Aligned_cols=118 Identities=17% Similarity=0.120 Sum_probs=81.7
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
++.+|||+|||+|.++..++.. . .+|+|+|+++ + ..+.++.++ .+|+.+. +.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~----------~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~-~~d~~~~-----~~ 271 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-F----------REVVAVDSSAEALRRAEENARLNGLGNVRVL-EANAFDL-----LR 271 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-E----------EEEEEEESCHHHHHHHHHHHHHTTCTTEEEE-ESCHHHH-----HH
T ss_pred CCCeEEEeeeccCHHHHHHHHh-C----------CEEEEEECCHHHHHHHHHHHHHcCCCCceEE-ECCHHHH-----HH
Confidence 6789999999999999999987 3 5899999996 1 124457888 8886552 11
Q ss_pred HH-hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC-ChHHHHHHH
Q psy1489 130 TI-LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR-NRPQLEESI 197 (229)
Q Consensus 130 ~~-~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~-~~~~~~~~l 197 (229)
.. -.+.+||+|++|++.... ...+..........++..+.++|+|||.+++...... ....+...+
T Consensus 272 ~~~~~~~~fD~Ii~dpP~~~~--~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i 339 (382)
T 1wxx_A 272 RLEKEGERFDLVVLDPPAFAK--GKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMV 339 (382)
T ss_dssp HHHHTTCCEEEEEECCCCSCC--STTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred HHHhcCCCeeEEEECCCCCCC--ChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHH
Confidence 11 125689999999764221 1123344445667788999999999999998765543 333344433
No 176
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.14 E-value=2.3e-11 Score=97.04 Aligned_cols=96 Identities=18% Similarity=0.210 Sum_probs=71.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.++.+|||+|||+|.++..+ + ..+|+|+|+++ +. ..+++.++ .+|+.+.. ++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~d~~~~~--------~~ 92 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----P---------YPQKVGVEPSEAMLAVGRRRAPEATWV-RAWGEALP--------FP 92 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----C---------CSEEEEECCCHHHHHHHHHHCTTSEEE-CCCTTSCC--------SC
T ss_pred CCCCeEEEECCCCCHhHHhC----C---------CCeEEEEeCCHHHHHHHHHhCCCcEEE-EcccccCC--------CC
Confidence 37889999999999988776 3 12899999997 21 12578888 89887632 45
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR 188 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~ 188 (229)
+++||+|++...... .+ ....++.++.++|+|||.+++..+...
T Consensus 93 ~~~fD~v~~~~~l~~-----~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 93 GESFDVVLLFTTLEF-----VE------DVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp SSCEEEEEEESCTTT-----CS------CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCcEEEEEEcChhhh-----cC------CHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 678999999764321 11 134678899999999999999876544
No 177
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.14 E-value=1.6e-10 Score=101.12 Aligned_cols=123 Identities=15% Similarity=0.062 Sum_probs=81.3
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CCCC--CCeEEecCCCCChhHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YPID--GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~~~--~~~~~~~~D~~~~~~~~ 126 (229)
.++.+|||+|||+|.++..++.. ...+|+|+|+++. ..+. +++++ .+|+.+.
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~----------ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~-~~D~~~~---- 275 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG----------GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLV-VMDVFDY---- 275 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT----------TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEE-ESCHHHH----
T ss_pred cCCCeEEEEeeccCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEE-ECCHHHH----
Confidence 56889999999999999999874 2358999999982 1233 67888 8886542
Q ss_pred HHHHH-hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC-ChHHHHHHHHhh
Q psy1489 127 RLVTI-LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR-NRPQLEESITRF 200 (229)
Q Consensus 127 ~i~~~-~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~-~~~~~~~~l~~~ 200 (229)
+... ..+.+||+|++|++....+.... .........++..+.++|+|||.+++...... ....+.+.+...
T Consensus 276 -l~~~~~~~~~fD~Ii~DPP~~~~~~~~~--~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~ 348 (385)
T 2b78_A 276 -FKYARRHHLTYDIIIIDPPSFARNKKEV--FSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKG 348 (385)
T ss_dssp -HHHHHHTTCCEEEEEECCCCC-----CC--CCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred -HHHHHHhCCCccEEEECCCCCCCChhhH--HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHH
Confidence 1111 12458999999976421110111 11223445678889999999999998765543 345566655544
No 178
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.14 E-value=3.4e-11 Score=101.20 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=64.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEE--EEEeCCC-CC-----------CCCCCeEE-ecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLV--LSVDKLP-IY-----------PIDGAVVL-SKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v--~gvD~~~-~~-----------~~~~~~~~-~~~D~~~~~~ 124 (229)
.++.+|||+|||+|.++..++..+.... +...| +|+|+|+ |. .++++.+. ..+++.+ .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~-----~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~--~ 123 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY-----PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSE--Y 123 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS-----TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHH--H
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC-----CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhh--h
Confidence 4678999999999988765554332100 33444 9999997 31 12333332 0332211 1
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
.......+++++||+|++.... +.. .....+|+++.++|||||.|++...
T Consensus 124 ~~~~~~~~~~~~fD~V~~~~~l-----~~~------~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 124 QSRMLEKKELQKWDFIHMIQML-----YYV------KDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp HHHHHTTTCCCCEEEEEEESCG-----GGC------SCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhccccCCCceeEEEEeeee-----eec------CCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 0000011357889999996643 111 1235689999999999999998653
No 179
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.13 E-value=5.4e-11 Score=99.84 Aligned_cols=139 Identities=13% Similarity=0.078 Sum_probs=88.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------C-------------CCCCCeEEecCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------Y-------------PIDGAVVLSKCD 118 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------~-------------~~~~~~~~~~~D 118 (229)
.++.+|||||||+|.++..++++ + ..+|++||+++ + . ..++++++ .+|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~---------~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~-~~D 142 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D---------VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT-IGD 142 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C---------CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE-ESC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C---------CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE-ECc
Confidence 45689999999999999998875 3 46999999996 1 1 12456777 776
Q ss_pred CCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC----CChHHHH
Q psy1489 119 FTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG----RNRPQLE 194 (229)
Q Consensus 119 ~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~----~~~~~~~ 194 (229)
..+ .+.. +++||+|++|.+.. .+. .... .....++.+.++|+|||.+++..... .....+.
T Consensus 143 ~~~-----~l~~---~~~fD~Ii~d~~~~-~~~--~~~l----~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~ 207 (281)
T 1mjf_A 143 GFE-----FIKN---NRGFDVIIADSTDP-VGP--AKVL----FSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAY 207 (281)
T ss_dssp HHH-----HHHH---CCCEEEEEEECCCC-C-------T----TSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHH
T ss_pred hHH-----Hhcc---cCCeeEEEECCCCC-CCc--chhh----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHH
Confidence 533 1221 56899999987531 110 0000 02467888999999999999864321 1245566
Q ss_pred HHHHhhCCeeEEEcC-CCCCCCCceEEEEecc
Q psy1489 195 ESITRFYSQVKILKP-PSSRSHSAELFLLGRG 225 (229)
Q Consensus 195 ~~l~~~F~~v~~~kp-~~sr~~s~E~Y~v~~~ 225 (229)
..++..|..+..... ..+- ...-.+++|.+
T Consensus 208 ~~l~~~f~~v~~~~~~vP~~-~g~~~~~~as~ 238 (281)
T 1mjf_A 208 KEMKKVFDRVYYYSFPVIGY-ASPWAFLVGVK 238 (281)
T ss_dssp HHHHHHCSEEEEEEECCTTS-SSSEEEEEEEE
T ss_pred HHHHHHCCceEEEEEecCCC-CceEEEEEeeC
Confidence 677777988776542 1222 33345555543
No 180
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.13 E-value=4.2e-11 Score=98.38 Aligned_cols=108 Identities=17% Similarity=0.125 Sum_probs=71.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHH-hccCCCCCCCCcEEEEEeCCC-CC--------CC-----C-C--------------
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLV-NSHGYDSKQPKGLVLSVDKLP-IY--------PI-----D-G-------------- 110 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~-~~~~~~~~~~~~~v~gvD~~~-~~--------~~-----~-~-------------- 110 (229)
++.+|||+|||+|.++..+++.+ . +..+|+|+|+++ +. .. . .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~--------~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR--------SLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKP 122 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG--------GEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc--------CCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccc
Confidence 56899999999999999999872 1 346899999996 21 11 0 1
Q ss_pred -----------Ce-------------EEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHH
Q psy1489 111 -----------AV-------------VLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAV 166 (229)
Q Consensus 111 -----------~~-------------~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~ 166 (229)
+. +. ++|+.+..... ....+..||+|+++.+...... ..+.........+
T Consensus 123 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~D~~~~~~~~---~~~~~~~fD~Iv~npp~~~~~~--~~~~~~~~~~~~~ 196 (250)
T 1o9g_A 123 SYLEAAQAARRLRERLTAEGGALPCAIR-TADVFDPRALS---AVLAGSAPDVVLTDLPYGERTH--WEGQVPGQPVAGL 196 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSCCEEEE-ECCTTCGGGHH---HHHTTCCCSEEEEECCGGGSSS--SSSCCCHHHHHHH
T ss_pred cchhhhhhhhhhhhhcccccccccccee-ecccccccccc---cccCCCCceEEEeCCCeecccc--ccccccccHHHHH
Confidence 45 77 88887742110 0013458999999865321111 1100112345678
Q ss_pred HHHHHHcccCCCEEEE
Q psy1489 167 IRFAVTYSKPGADCLI 182 (229)
Q Consensus 167 l~~~~~~LkpgG~~v~ 182 (229)
+..+.++|+|||.+++
T Consensus 197 l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 197 LRSLASALPAHAVIAV 212 (250)
T ss_dssp HHHHHHHSCTTCEEEE
T ss_pred HHHHHHhcCCCcEEEE
Confidence 8899999999999998
No 181
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.13 E-value=6.1e-11 Score=97.69 Aligned_cols=96 Identities=11% Similarity=0.070 Sum_probs=69.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|..+..+++.++ +.++|+++|+++ +. .+ .+++++ .+|..+.
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~--------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~-~gda~~~----- 143 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIP--------EDGKILAMDINKENYELGLPVIKKAGVDHKIDFR-EGPALPV----- 143 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSC--------TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEE-ESCHHHH-----
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEE-ECCHHHH-----
Confidence 3568999999999999999999863 368999999997 21 12 246777 7875441
Q ss_pred HHHHh----CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTIL----KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~----~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.... .+++||+|++|... . .....+..+.++|+|||.+++.
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~~-------~-------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDADK-------D-------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSCS-------T-------THHHHHHHHHHHBCTTCCEEEE
T ss_pred HHHHHhccCCCCCEEEEEEcCch-------H-------HHHHHHHHHHHhCCCCeEEEEe
Confidence 11111 25689999998642 0 1235677889999999999874
No 182
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.13 E-value=1.6e-10 Score=101.51 Aligned_cols=131 Identities=18% Similarity=0.174 Sum_probs=86.3
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC-CCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID-GAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~-~~~~~~~~D~~~~~~~~~ 127 (229)
+++.+|||+|||+|.++..+++. +..+|+|+|+++ + ..+. +++++ .+|+.+.
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~----------g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~-~~d~~~~----- 279 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA----------GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFI-VGSAFEE----- 279 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE-ESCHHHH-----
T ss_pred hCCCeEEEecCCCCHHHHHHHHC----------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEE-ECCHHHH-----
Confidence 47899999999999999999875 246999999996 1 1233 67788 8886542
Q ss_pred HHHH-hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC-ChHHHHHHHHhhC----
Q psy1489 128 LVTI-LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR-NRPQLEESITRFY---- 201 (229)
Q Consensus 128 i~~~-~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~-~~~~~~~~l~~~F---- 201 (229)
+... ..+.+||+|++|++... ....+...........+..+.++|+|||.+++...... ....+...+...+
T Consensus 280 ~~~~~~~~~~fD~Vi~dpP~~~--~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~ 357 (396)
T 2as0_A 280 MEKLQKKGEKFDIVVLDPPAFV--QHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAG 357 (396)
T ss_dssp HHHHHHTTCCEEEEEECCCCSC--SSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhCCCCCEEEECCCCCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcC
Confidence 1111 12568999999975321 11223334445566788999999999999988765543 3334444443322
Q ss_pred CeeEEEc
Q psy1489 202 SQVKILK 208 (229)
Q Consensus 202 ~~v~~~k 208 (229)
..+.+..
T Consensus 358 ~~~~~i~ 364 (396)
T 2as0_A 358 KFLKMLE 364 (396)
T ss_dssp EEEEESS
T ss_pred CeEEEEe
Confidence 2455554
No 183
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.12 E-value=4.5e-10 Score=93.98 Aligned_cols=141 Identities=12% Similarity=0.032 Sum_probs=91.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------C-----C--CCCCeEEecCCCCChhHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------Y-----P--IDGAVVLSKCDFTQPDIQ 125 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------~-----~--~~~~~~~~~~D~~~~~~~ 125 (229)
.+.+|||||||+|..+..++++. +..+|++||+++ + . . .++++++ .+|..+.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~-~~D~~~~--- 141 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP---------SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ-VDDGFMH--- 141 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT---------TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE-ESCSHHH---
T ss_pred CCCEEEEECCchHHHHHHHHhCC---------CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEE-ECcHHHH---
Confidence 46899999999999999988753 457999999996 1 0 1 2467888 8886541
Q ss_pred HHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC----ChHHHHHHHHhhC
Q psy1489 126 DRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR----NRPQLEESITRFY 201 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~----~~~~~~~~l~~~F 201 (229)
+. ..+++||+|++|.... .+.. .+. .....++.+.++|+|||.+++...... ....+...+++.|
T Consensus 142 --l~--~~~~~fD~Ii~d~~~~-~~~~--~~l----~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 210 (275)
T 1iy9_A 142 --IA--KSENQYDVIMVDSTEP-VGPA--VNL----FTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIF 210 (275)
T ss_dssp --HH--TCCSCEEEEEESCSSC-CSCC--CCC----STTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTC
T ss_pred --Hh--hCCCCeeEEEECCCCC-CCcc--hhh----hHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhC
Confidence 21 1256899999987531 1110 000 013567789999999999998754321 2455667788889
Q ss_pred CeeEEEcC-CCCCCCCceEEEEecc
Q psy1489 202 SQVKILKP-PSSRSHSAELFLLGRG 225 (229)
Q Consensus 202 ~~v~~~kp-~~sr~~s~E~Y~v~~~ 225 (229)
..+..+.. ..+-++..-.+++|.+
T Consensus 211 ~~v~~~~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 211 PITKLYTANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp SEEEEEEECCTTSGGGCEEEEEEES
T ss_pred CCeEEEEEecCcccCcceEEEEeeC
Confidence 88876642 1222223345566643
No 184
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.12 E-value=7.5e-11 Score=94.00 Aligned_cols=91 Identities=19% Similarity=0.236 Sum_probs=68.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++. + ++|+|+|+++ + ..++++.++ .+|+.+..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~-~----------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~---- 138 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL-V----------QHVCSVERIKGLQWQARRRLKNLDLHNVSTR-HGDGWQGW---- 138 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-S----------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEE-ESCGGGCC----
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-C----------CEEEEEecCHHHHHHHHHHHHHcCCCceEEE-ECCcccCC----
Confidence 467899999999999999999887 3 6999999996 2 124568888 88876521
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
..+++||+|+++..+.. .. ..+.++|+|||.+++.+..
T Consensus 139 ----~~~~~~D~i~~~~~~~~-----~~------------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 ----QARAPFDAIIVTAAPPE-----IP------------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ----GGGCCEEEEEESSBCSS-----CC------------THHHHTEEEEEEEEEEECS
T ss_pred ----ccCCCccEEEEccchhh-----hh------------HHHHHhcccCcEEEEEEcC
Confidence 23568999999875421 11 1378899999999997655
No 185
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.12 E-value=3.6e-11 Score=97.14 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=69.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++.++ +.++|+++|+++ +. .. .+++++ .+|+.+.
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~-~~d~~~~----- 133 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALP--------ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLR-LKPALET----- 133 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSC--------TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEE-ESCHHHH-----
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEE-EcCHHHH-----
Confidence 4678999999999999999998753 357999999997 21 12 467788 8876431
Q ss_pred HHHHhCC---CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKD---DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~---~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+...... +.||+|++|... . .....+..+.++|+|||.+++.
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~~--------~------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDADK--------E------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSCS--------T------THHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhcCCCCCccEEEECCCH--------H------HHHHHHHHHHHHcCCCeEEEEE
Confidence 1111111 689999998742 0 1235678899999999999884
No 186
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.12 E-value=3.1e-11 Score=96.31 Aligned_cols=96 Identities=15% Similarity=0.046 Sum_probs=65.6
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
++.+|||+|||+|.++..++.+. ..+|+|+|+++ |. .+.+++++ ++|+.+. +
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~----------~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~-~~D~~~~-----~- 116 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY----------AAGATLIEMDRAVSQQLIKNLATLKAGNARVV-NSNAMSF-----L- 116 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT----------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEE-CSCHHHH-----H-
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC----------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-ECCHHHH-----H-
Confidence 57899999999999999877652 25999999997 21 23467888 8875441 1
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHH--HcccCCCEEEEeecC
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAV--TYSKPGADCLIKIWD 186 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~--~~LkpgG~~v~~~~~ 186 (229)
. ..++.||+|++|++.. ..+ ...++..+. ++|+|||.+++....
T Consensus 117 ~-~~~~~fD~V~~~~p~~-----~~~-------~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 A-QKGTPHNIVFVDPPFR-----RGL-------LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S-SCCCCEEEEEECCSSS-----TTT-------HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred h-hcCCCCCEEEECCCCC-----CCc-------HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1 2356899999987631 111 123344443 469999999987644
No 187
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.12 E-value=3.1e-10 Score=95.95 Aligned_cols=143 Identities=10% Similarity=0.007 Sum_probs=90.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----C---------CCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----P---------IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~---------~~~~~~~~~~D~~~~~~ 124 (229)
..+.+|||||||+|.++..++++. +..+|+++|+++ +. . .++++++ .+|..+.
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~-~~D~~~~-- 156 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD---------SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV-IANGAEY-- 156 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST---------TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-ESCHHHH--
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE-ECcHHHH--
Confidence 346899999999999999988764 457999999996 10 0 2467777 7875431
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC----ChHHHHHHHHhh
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR----NRPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~----~~~~~~~~l~~~ 200 (229)
+. ..+++||+|++|......+. ... ......+..+.++|+|||.+++...... ....+...++..
T Consensus 157 ---l~--~~~~~fD~Ii~d~~~~~~~~--~~~----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 225 (296)
T 1inl_A 157 ---VR--KFKNEFDVIIIDSTDPTAGQ--GGH----LFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV 225 (296)
T ss_dssp ---GG--GCSSCEEEEEEEC----------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH
T ss_pred ---Hh--hCCCCceEEEEcCCCcccCc--hhh----hhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH
Confidence 11 12568999999864210110 000 0124678889999999999998653321 245566778888
Q ss_pred CCeeEEEcC-CCCCCCCceEEEEecc
Q psy1489 201 YSQVKILKP-PSSRSHSAELFLLGRG 225 (229)
Q Consensus 201 F~~v~~~kp-~~sr~~s~E~Y~v~~~ 225 (229)
|..+..+.. ..+-++..-.+++|.+
T Consensus 226 F~~v~~~~~~vp~~p~g~~~f~~as~ 251 (296)
T 1inl_A 226 FPITRVYLGFMTTYPSGMWSYTFASK 251 (296)
T ss_dssp CSEEEEEEEECTTSTTSEEEEEEEES
T ss_pred CCceEEEEeecCccCCCceEEEEecC
Confidence 988876641 1111234455666653
No 188
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.12 E-value=1.6e-10 Score=100.15 Aligned_cols=109 Identities=25% Similarity=0.290 Sum_probs=75.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--CC------------CC---CCCeEEecCCCCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--IY------------PI---DGAVVLSKCDFTQ 121 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~~------------~~---~~~~~~~~~D~~~ 121 (229)
.++|++|||+|||||+.+.++++.. ..+.|+++|+++ +. .+ .++.+. ..|...
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~---------~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~-~~D~~~ 215 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTG---------CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVT-SWDGRK 215 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTT---------CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEE-CCCGGG
T ss_pred CCCCCEEEEecCCccHHHHHHHHhc---------CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEE-eCchhh
Confidence 4689999999999999999999864 457899999985 10 01 245566 666554
Q ss_pred hhHHHHHHHHhCCCCccEEEeCCCCCCC--CCC--c------cc---HHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 122 PDIQDRLVTILKDDKLDVVLSDMAPNAT--GMR--E------MD---HDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 122 ~~~~~~i~~~~~~~~~D~V~sd~~~~~~--g~~--~------~d---~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
. .. ...+.||.|+.|+++..+ |.. . .. ......++..+|..+.++|||||++|-.+
T Consensus 216 ~------~~-~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 216 W------GE-LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp H------HH-HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred c------ch-hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 2 11 346789999999986542 111 1 11 11223456789999999999999998544
No 189
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.11 E-value=2e-11 Score=98.05 Aligned_cols=98 Identities=20% Similarity=0.204 Sum_probs=69.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---CCCCCeEEecCCCCChhHHHHHHHHhCCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---PIDGAVVLSKCDFTQPDIQDRLVTILKDD 135 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---~~~~~~~~~~~D~~~~~~~~~i~~~~~~~ 135 (229)
.++.+|||+|||+|.++..+++. + .+++|+|+++ +. ......+. .+|+.+.. ..++++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~----------~~~~~~D~~~~~~~~~~~~~~~~~-~~d~~~~~------~~~~~~ 92 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G----------TRVSGIEAFPEAAEQAKEKLDHVV-LGDIETMD------MPYEEE 92 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T----------CEEEEEESSHHHHHHHHTTSSEEE-ESCTTTCC------CCSCTT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C----------CeEEEEeCCHHHHHHHHHhCCcEE-EcchhhcC------CCCCCC
Confidence 47889999999999999998875 3 6999999987 21 11123566 78876521 114467
Q ss_pred CccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 136 KLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 136 ~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
.||+|++..... +..+ ...++..+.++|+|||.+++.+..
T Consensus 93 ~fD~v~~~~~l~----~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 93 QFDCVIFGDVLE----HLFD-------PWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp CEEEEEEESCGG----GSSC-------HHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred ccCEEEECChhh----hcCC-------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 899999965431 1111 246788899999999999987643
No 190
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.11 E-value=4.3e-11 Score=93.35 Aligned_cols=102 Identities=15% Similarity=0.037 Sum_probs=68.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++. +..+|+|+|+++ +. .+ +++.++ .+|+.+.. ..
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~----------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~--~~ 109 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR----------GMDKSICIEKNFAALKVIKENIAITKEPEKFEVR-KMDANRAL--EQ 109 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE-ESCHHHHH--HH
T ss_pred cCCCCEEEeCCccCHHHHHHHHc----------CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEE-ECcHHHHH--HH
Confidence 46789999999999999988774 346999999997 21 11 357788 88865521 11
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHH--HHHcccCCCEEEEeecCCC
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRF--AVTYSKPGADCLIKIWDGR 188 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~--~~~~LkpgG~~v~~~~~~~ 188 (229)
+ ...++.||+|++|.+.. ..+. ...+.. +.++|+|||.+++......
T Consensus 110 ~--~~~~~~fD~i~~~~~~~-----~~~~-------~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 110 F--YEEKLQFDLVLLDPPYA-----KQEI-------VSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp H--HHTTCCEEEEEECCCGG-----GCCH-------HHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred H--HhcCCCCCEEEECCCCC-----chhH-------HHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 1 12357899999987521 1111 112222 3889999999998765543
No 191
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.11 E-value=9.2e-11 Score=102.25 Aligned_cols=93 Identities=24% Similarity=0.316 Sum_probs=66.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+|++|||||||+|.++..+|+. ++.+|+|||.++|. .+ ..+.++ ++|+.+..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a----------GA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i-~~~~~~~~------ 145 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA----------GARRVYAVEASAIWQQAREVVRFNGLEDRVHVL-PGPVETVE------ 145 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----------TCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEE-ESCTTTCC------
T ss_pred CCCEEEEeCCCccHHHHHHHHh----------CCCEEEEEeChHHHHHHHHHHHHcCCCceEEEE-eeeeeeec------
Confidence 6899999999999999887764 35699999999852 12 347888 99988742
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEE
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCL 181 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v 181 (229)
+ +++||+|+|...-.. ...+ ..+..++....++|+|||.++
T Consensus 146 --l-pe~~DvivsE~~~~~-l~~e-------~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 --L-PEQVDAIVSEWMGYG-LLHE-------SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp --C-SSCEEEEECCCCBTT-BTTT-------CSHHHHHHHHHHHEEEEEEEE
T ss_pred --C-CccccEEEeeccccc-cccc-------chhhhHHHHHHhhCCCCceEC
Confidence 3 468999999653211 1111 123456666789999999986
No 192
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.11 E-value=2.4e-11 Score=101.72 Aligned_cols=105 Identities=19% Similarity=0.129 Sum_probs=70.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC--------------CCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP--------------IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~--------------~~~~~~~~~~D~~~~~~ 124 (229)
.++.+|||+|||+|.++..+++. + .+|+|+|+++ |.. ..++.+. .+|+.+..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~-~~d~~~~~- 122 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE-G----------FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE-EANWLTLD- 122 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE-ECCGGGHH-
T ss_pred cCCCEEEEecCCCCHHHHHHHHC-C----------CeEEEEECCHHHHHHHHHhhhhcccccccceeeEe-ecChhhCc-
Confidence 46789999999999999998876 2 4999999997 210 1346667 77776521
Q ss_pred HHHHHHHhCCCCccEEEeC-CCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 125 QDRLVTILKDDKLDVVLSD-MAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd-~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
...+++++||+|++. .... +..+.....+....++.++.++|||||.|++.+.
T Consensus 123 ----~~~~~~~~fD~V~~~g~~l~----~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 123 ----KDVPAGDGFDAVICLGNSFA----HLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp ----HHSCCTTCEEEEEECTTCGG----GSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ----cccccCCCeEEEEEcChHHh----hcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 111457899999996 3221 0001000012245788999999999999998653
No 193
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.11 E-value=1.3e-10 Score=99.21 Aligned_cols=124 Identities=13% Similarity=0.004 Sum_probs=81.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CC------CCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YP------IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~------~~~~~~~~~~D~~~~~~ 124 (229)
.++.+|||||||+|..+..+++.. +..+|+++|+++ + .. .++++++ .+|+.+.
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~-~~D~~~~-- 174 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE---------SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF-CGDGFEF-- 174 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT---------TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE-CSCHHHH--
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE-EChHHHH--
Confidence 356899999999999999988753 457999999996 1 11 2457777 7775431
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHH-HHHHHHHHHcccCCCEEEEeecCC----CChHHHHHHHHh
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLA-IAVIRFAVTYSKPGADCLIKIWDG----RNRPQLEESITR 199 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~-~~~l~~~~~~LkpgG~~v~~~~~~----~~~~~~~~~l~~ 199 (229)
+.. .+++||+|++|.... .+ . . ..+. ...++.+.++|+|||.+++..-.. .....+...++.
T Consensus 175 ---l~~--~~~~fD~Ii~d~~~~-~~---~-~---~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 241 (314)
T 2b2c_A 175 ---LKN--HKNEFDVIITDSSDP-VG---P-A---ESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRK 241 (314)
T ss_dssp ---HHH--CTTCEEEEEECCC---------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHH
T ss_pred ---HHh--cCCCceEEEEcCCCC-CC---c-c---hhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHH
Confidence 221 357899999987421 01 0 0 0111 577888999999999999865221 124456677888
Q ss_pred hCCeeEEEc
Q psy1489 200 FYSQVKILK 208 (229)
Q Consensus 200 ~F~~v~~~k 208 (229)
.|..+.+..
T Consensus 242 vF~~v~~~~ 250 (314)
T 2b2c_A 242 IFPAVTYAQ 250 (314)
T ss_dssp HCSEEEEEE
T ss_pred HCCcceEEE
Confidence 898876553
No 194
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.10 E-value=2.2e-10 Score=99.97 Aligned_cols=97 Identities=21% Similarity=0.202 Sum_probs=69.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
..++.+|||||||+|.++..+++. + ..+|+|+|+++|. .+ ..++++ .+|+.+..
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g---------~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~---- 125 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-G---------ARKVYAVEATKMADHARALVKANNLDHIVEVI-EGSVEDIS---- 125 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-T---------CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEE-ESCGGGCC----
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-C---------CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEE-ECchhhcC----
Confidence 357899999999999999998876 2 3599999999642 12 237888 89887632
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+ +++||+|+++....... .. .....++..+.++|+|||.|++.
T Consensus 126 ----~-~~~~D~Iv~~~~~~~l~-~e-------~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 126 ----L-PEKVDVIISEWMGYFLL-RE-------SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp ----C-SSCEEEEEECCCBTTBT-TT-------CTHHHHHHHHHHHEEEEEEEESS
T ss_pred ----c-CCcceEEEEcChhhccc-ch-------HHHHHHHHHHHhhCCCCeEEEEe
Confidence 2 27899999976432111 00 11345778888999999999754
No 195
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.10 E-value=9.1e-11 Score=100.00 Aligned_cols=92 Identities=25% Similarity=0.324 Sum_probs=68.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
++++.+|||+|||+|.++..+++..+ ..++|+|+|+++ + ..++++.+. .+|+.+..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~--------~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~-~~d~~~~~---- 139 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVG--------EKGLVVSVEYSRKICEIAKRNVERLGIENVIFV-CGDGYYGV---- 139 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC--------TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEE-ESCGGGCC----
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEE-ECChhhcc----
Confidence 46789999999999999999998863 247899999996 2 123567888 88876521
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
..+++||+|+++.+... .. ..+.++|||||.+++.+
T Consensus 140 ----~~~~~fD~Iv~~~~~~~-----~~------------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 140 ----PEFSPYDVIFVTVGVDE-----VP------------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp ----GGGCCEEEEEECSBBSC-----CC------------HHHHHHEEEEEEEEEEB
T ss_pred ----ccCCCeEEEEEcCCHHH-----HH------------HHHHHhcCCCcEEEEEE
Confidence 12468999999875421 11 34678999999999864
No 196
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.10 E-value=5.4e-11 Score=102.32 Aligned_cols=103 Identities=15% Similarity=0.067 Sum_probs=77.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.+|.+|||+|||+|.++.. ++. ..+|+|+|+++ + ..+ .++.++ .+|+.+.
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~~-----------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~-~~D~~~~---- 255 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CKN-----------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPI-LSDVREV---- 255 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TTT-----------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE-ESCGGGC----
T ss_pred cCCCCEEEEccCccCHHHHh-ccC-----------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-ECChHHh----
Confidence 35789999999999999999 762 36999999996 1 123 367888 8987762
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhhC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRFY 201 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~F 201 (229)
. ..||+|++|++... ...+..+.++|+|||.+++..+... ...+.+.+...+
T Consensus 256 ------~-~~fD~Vi~dpP~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~~ 307 (336)
T 2yx1_A 256 ------D-VKGNRVIMNLPKFA---------------HKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKKC 307 (336)
T ss_dssp ------C-CCEEEEEECCTTTG---------------GGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHHS
T ss_pred ------c-CCCcEEEECCcHhH---------------HHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHhc
Confidence 1 68999999875311 1466778899999999998766655 567777777653
No 197
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.10 E-value=8.6e-11 Score=98.76 Aligned_cols=124 Identities=13% Similarity=0.086 Sum_probs=84.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CC------CCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YP------IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~------~~~~~~~~~~D~~~~~~ 124 (229)
.++.+|||||||+|.++..+++.. +..+|+++|+++ + .. .++++++ .+|..+.
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~-~~D~~~~-- 144 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK---------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF-IEDASKF-- 144 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE-ESCHHHH--
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE-ECChHHH--
Confidence 456899999999999999988653 457999999996 1 11 2467777 7875431
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC----CChHHHHHHHHhh
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG----RNRPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~----~~~~~~~~~l~~~ 200 (229)
+.. .+++||+|++|... ..+. .... .....++.+.++|+|||.+++..... .....+...++..
T Consensus 145 ---l~~--~~~~fD~Ii~d~~~-~~~~--~~~l----~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 212 (283)
T 2i7c_A 145 ---LEN--VTNTYDVIIVDSSD-PIGP--AETL----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL 212 (283)
T ss_dssp ---HHH--CCSCEEEEEEECCC-TTTG--GGGG----SSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred ---HHh--CCCCceEEEEcCCC-CCCc--chhh----hHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH
Confidence 211 25789999998742 1111 1110 01467888999999999999874321 1235566778888
Q ss_pred CCeeEEE
Q psy1489 201 YSQVKIL 207 (229)
Q Consensus 201 F~~v~~~ 207 (229)
|..+..+
T Consensus 213 F~~v~~~ 219 (283)
T 2i7c_A 213 FKKVEYA 219 (283)
T ss_dssp CSEEEEE
T ss_pred CCceEEE
Confidence 9887654
No 198
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.09 E-value=1.3e-09 Score=94.25 Aligned_cols=100 Identities=20% Similarity=0.171 Sum_probs=72.8
Q ss_pred hhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC-CCeEEecCCCCC
Q psy1489 54 SKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID-GAVVLSKCDFTQ 121 (229)
Q Consensus 54 ~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~-~~~~~~~~D~~~ 121 (229)
..+. +.++.+|||+|||+|.++..+++.. |..+++++|+ + +. .+. +++++ .+|+.+
T Consensus 184 ~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~ 251 (359)
T 1x19_A 184 EEAK-LDGVKKMIDVGGGIGDISAAMLKHF---------PELDSTILNL-PGAIDLVNENAAEKGVADRMRGI-AVDIYK 251 (359)
T ss_dssp HHCC-CTTCCEEEEESCTTCHHHHHHHHHC---------TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEE-ECCTTT
T ss_pred HhcC-CCCCCEEEEECCcccHHHHHHHHHC---------CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEE-eCcccc
Confidence 3444 4567899999999999999999886 5679999999 6 31 133 38888 999887
Q ss_pred hhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 122 PDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 122 ~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.. ++ .+|+|++.... +.++. +.+..+++.+.++|+|||.+++..
T Consensus 252 ~~--------~~--~~D~v~~~~vl-----h~~~d----~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 252 ES--------YP--EADAVLFCRIL-----YSANE----QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SC--------CC--CCSEEEEESCG-----GGSCH----HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CC--------CC--CCCEEEEechh-----ccCCH----HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 31 22 34999986543 22221 235678999999999999997654
No 199
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.09 E-value=2.5e-10 Score=97.79 Aligned_cols=95 Identities=23% Similarity=0.228 Sum_probs=68.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++. +..+|+|+|+++|. .+ .+++++ .+|+.+..
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~----------g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~----- 100 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH----------GAKHVIGVDMSSIIEMAKELVELNGFSDKITLL-RGKLEDVH----- 100 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT----------CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEE-ESCTTTSC-----
T ss_pred cCCCEEEEecCccHHHHHHHHHC----------CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEE-ECchhhcc-----
Confidence 46789999999999999988875 34699999999742 12 347888 99988732
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEE
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCL 181 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v 181 (229)
+++++||+|+++...... ... .....++..+.++|+|||.++
T Consensus 101 ---~~~~~~D~Ivs~~~~~~l-~~~-------~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 ---LPFPKVDIIISEWMGYFL-LYE-------SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ---CSSSCEEEEEECCCBTTB-STT-------CCHHHHHHHHHHHEEEEEEEE
T ss_pred ---CCCCcccEEEEeCchhhc-ccH-------HHHHHHHHHHHhhcCCCeEEE
Confidence 445789999997532110 011 113456777889999999997
No 200
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.08 E-value=2.7e-10 Score=99.00 Aligned_cols=103 Identities=12% Similarity=0.108 Sum_probs=74.9
Q ss_pred hhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC----CCCCCCeEEecCCCCChhHHHH
Q psy1489 52 IDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI----YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 52 i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~----~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+...+..+.++.+|||+|||+|.++..++++. +..+++++|+..+ ...++++++ .+|+.++
T Consensus 200 l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~---------~~~~~~~~D~~~~~~~a~~~~~v~~~-~~d~~~~----- 264 (372)
T 1fp1_D 200 MLEIYTGFEGISTLVDVGGGSGRNLELIISKY---------PLIKGINFDLPQVIENAPPLSGIEHV-GGDMFAS----- 264 (372)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEECHHHHTTCCCCTTEEEE-ECCTTTC-----
T ss_pred HHHHhhccCCCCEEEEeCCCCcHHHHHHHHHC---------CCCeEEEeChHHHHHhhhhcCCCEEE-eCCcccC-----
Confidence 33444434567899999999999999999886 5679999998322 124578888 9998762
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
++. ||+|++.... +.++. ..+..+|+.+.++|+|||.+++..
T Consensus 265 ----~~~--~D~v~~~~~l-----h~~~d----~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 265 ----VPQ--GDAMILKAVC-----HNWSD----EKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp ----CCC--EEEEEEESSG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCC--CCEEEEeccc-----ccCCH----HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 333 9999996542 22222 234578999999999999998763
No 201
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.08 E-value=1.5e-10 Score=92.56 Aligned_cols=94 Identities=26% Similarity=0.385 Sum_probs=69.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++..+ +.++|+++|+++ +. ..+++.+. .+|+....
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~~---- 141 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVG--------EDGLVVSIERIPELAEKAERTLRKLGYDNVIVI-VGDGTLGY---- 141 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEE-ESCGGGCC----
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEE-ECCcccCC----
Confidence 46789999999999999999999874 457999999996 21 23467788 88864310
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
..++.||+|+++.... ... ..+.++|+|||.+++.+..
T Consensus 142 ----~~~~~fD~v~~~~~~~-----~~~------------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 142 ----EPLAPYDRIYTTAAGP-----KIP------------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ----GGGCCEEEEEESSBBS-----SCC------------HHHHHTEEEEEEEEEEESS
T ss_pred ----CCCCCeeEEEECCchH-----HHH------------HHHHHHcCCCcEEEEEECC
Confidence 1246799999976531 111 3578899999999987654
No 202
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.08 E-value=2.7e-10 Score=92.53 Aligned_cols=110 Identities=10% Similarity=0.058 Sum_probs=79.8
Q ss_pred CccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CCCC-CCeEEecCCCCChhH
Q psy1489 57 KFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YPID-GAVVLSKCDFTQPDI 124 (229)
Q Consensus 57 ~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~~~-~~~~~~~~D~~~~~~ 124 (229)
.++++|.+|||+|||+|.++..+++.. +..+|+|+|+++- ..+. .+++. .+|..+.
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~---------~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~-~~d~l~~-- 78 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERG---------QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVR-LANGLAA-- 78 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT---------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEE-ECSGGGG--
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE-ECchhhh--
Confidence 346789999999999999999999863 5679999999961 1233 47788 8887542
Q ss_pred HHHHHHHhCCC-CccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh
Q psy1489 125 QDRLVTILKDD-KLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~~-~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~ 200 (229)
++.. .||+|+..++ | . .+...++..+...|+++|+||+.-. .....+.+.|...
T Consensus 79 -------l~~~~~~D~IviaG~----G-----g----~~i~~Il~~~~~~L~~~~~lVlq~~--~~~~~vr~~L~~~ 133 (225)
T 3kr9_A 79 -------FEETDQVSVITIAGM----G-----G----RLIARILEEGLGKLANVERLILQPN--NREDDLRIWLQDH 133 (225)
T ss_dssp -------CCGGGCCCEEEEEEE----C-----H----HHHHHHHHHTGGGCTTCCEEEEEES--SCHHHHHHHHHHT
T ss_pred -------cccCcCCCEEEEcCC----C-----h----HHHHHHHHHHHHHhCCCCEEEEECC--CCHHHHHHHHHHC
Confidence 3333 6998875321 1 1 2345678889999999999998554 3567777777665
No 203
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.08 E-value=1.5e-10 Score=98.93 Aligned_cols=125 Identities=13% Similarity=0.077 Sum_probs=85.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CC------CCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YP------IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~------~~~~~~~~~~D~~~~~~ 124 (229)
.++.+|||+|||+|.++..+++.. +..+|+++|+++ + .. .++++++ .+|+.+.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~-~~D~~~~-- 182 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK---------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF-IEDASKF-- 182 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE-ESCHHHH--
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE-EccHHHH--
Confidence 356899999999999999988753 457999999996 1 11 2457788 8875431
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC----ChHHHHHHHHhh
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR----NRPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~----~~~~~~~~l~~~ 200 (229)
+. ..+++||+|++|... ..+. .... .....+..+.++|+|||.+++...... ....+.+.++..
T Consensus 183 ---l~--~~~~~fDvIi~d~~~-p~~~--~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 183 ---LE--NVTNTYDVIIVDSSD-PIGP--AETL----FNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL 250 (321)
T ss_dssp ---HH--HCCSCEEEEEEECCC-SSSG--GGGG----SSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT
T ss_pred ---Hh--hcCCCceEEEECCcC-CCCc--chhh----hHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 11 125689999998742 1110 1100 014678889999999999998754321 245566777788
Q ss_pred CCeeEEEc
Q psy1489 201 YSQVKILK 208 (229)
Q Consensus 201 F~~v~~~k 208 (229)
|..+..+.
T Consensus 251 F~~v~~~~ 258 (321)
T 2pt6_A 251 FKKVEYAN 258 (321)
T ss_dssp CSEEEEEE
T ss_pred CCCeEEEE
Confidence 98887664
No 204
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.08 E-value=1.5e-09 Score=93.99 Aligned_cols=97 Identities=24% Similarity=0.225 Sum_probs=71.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++.. +..+++++|+ + +. .+ .+++++ .+|+.+.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~---------~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~---- 244 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRA---------PHLRGTLVEL-AGPAERARRRFADAGLADRVTVA-EGDFFKP---- 244 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEE-ECCTTSC----
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHC---------CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEE-eCCCCCc----
Confidence 3567899999999999999999875 5679999999 6 21 12 268888 9998752
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
++. .||+|++.... +.++. ..+..+++.+.++|+|||.+++..+
T Consensus 245 -----~~~-~~D~v~~~~vl-----~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 245 -----LPV-TADVVLLSFVL-----LNWSD----EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -----CSC-CEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -----CCC-CCCEEEEeccc-----cCCCH----HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 333 49999996543 12222 2235788999999999999987554
No 205
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.08 E-value=9.3e-10 Score=94.05 Aligned_cols=119 Identities=15% Similarity=0.071 Sum_probs=84.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++.. |..+++++|+ + +. .+ +++++. .+|+.++
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~----- 231 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH---------EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVV-VGSFFDP----- 231 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEE-ECCTTSC-----
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC---------CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEe-cCCCCCC-----
Confidence 456899999999999999999886 5679999999 5 21 12 468888 9998752
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC-------------------
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR------------------- 188 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~------------------- 188 (229)
++. .||+|++.... +.++. ..+..+++.+.++|+|||.+++..+..+
T Consensus 232 ----~p~-~~D~v~~~~vl-----h~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~ 297 (332)
T 3i53_A 232 ----LPA-GAGGYVLSAVL-----HDWDD----LSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGK 297 (332)
T ss_dssp ----CCC-SCSEEEEESCG-----GGSCH----HHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCC
T ss_pred ----CCC-CCcEEEEehhh-----ccCCH----HHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCC
Confidence 333 79999995532 22222 2356789999999999999987543211
Q ss_pred --ChHHHHHHHHhh-CCeeEEEc
Q psy1489 189 --NRPQLEESITRF-YSQVKILK 208 (229)
Q Consensus 189 --~~~~~~~~l~~~-F~~v~~~k 208 (229)
...++...+++. |..+.+..
T Consensus 298 ~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 298 ERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCEEEEEEE
Confidence 234555666655 77776663
No 206
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.08 E-value=4.5e-11 Score=91.75 Aligned_cols=99 Identities=14% Similarity=0.025 Sum_probs=67.1
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
++.+|||+|||+|.++..+++.. ..|+|+|+++ +. .. +++++ .+|+.+.. ..+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~-~~d~~~~~--~~~~ 105 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG-----------WEAVLVEKDPEAVRLLKENVRRTGL-GARVV-ALPVEVFL--PEAK 105 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT-----------CEEEEECCCHHHHHHHHHHHHHHTC-CCEEE-CSCHHHHH--HHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC-----------CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEE-eccHHHHH--Hhhh
Confidence 67899999999999999988763 2499999997 21 12 67888 88765421 1111
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHH--HHcccCCCEEEEeecCCCC
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFA--VTYSKPGADCLIKIWDGRN 189 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~--~~~LkpgG~~v~~~~~~~~ 189 (229)
-.+++||+|+++.+.. ...+ ..+..+ .++|+|||.+++.......
T Consensus 106 --~~~~~~D~i~~~~~~~----~~~~---------~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 106 --AQGERFTVAFMAPPYA----MDLA---------ALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp --HTTCCEEEEEECCCTT----SCTT---------HHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred --ccCCceEEEEECCCCc----hhHH---------HHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 1234799999987542 1111 223333 4999999999987765443
No 207
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.07 E-value=5.7e-10 Score=97.00 Aligned_cols=96 Identities=10% Similarity=0.155 Sum_probs=72.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC----CCCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI----YPIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~----~~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
+.++.+|||+|||+|.++..+++.. |..+++++|+..+ ...++++++ .+|+.++ +++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~~~~~~a~~~~~v~~~-~~d~~~~---------~p~ 261 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY---------PSINAINFDLPHVIQDAPAFSGVEHL-GGDMFDG---------VPK 261 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEECHHHHTTCCCCTTEEEE-ECCTTTC---------CCC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC---------CCCEEEEEehHHHHHhhhhcCCCEEE-ecCCCCC---------CCC
Confidence 4567899999999999999999886 6679999999332 223578899 9998762 343
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
. |+|++.... +.+.. ..+..+|+.+.++|+|||++++..
T Consensus 262 ~--D~v~~~~vl-----h~~~~----~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 262 G--DAIFIKWIC-----HDWSD----EHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp C--SEEEEESCG-----GGBCH----HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred C--CEEEEechh-----hcCCH----HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 999985532 22222 335678999999999999998754
No 208
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.07 E-value=1.1e-10 Score=94.68 Aligned_cols=95 Identities=18% Similarity=0.179 Sum_probs=70.9
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++.. +.++|+++|+++ +. .+ .++.++ .+|+.+.
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~----- 117 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQAL---------PEATIVSIERDERRYEEAHKHVKALGLESRIELL-FGDALQL----- 117 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHC---------TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE-CSCGGGS-----
T ss_pred cCCCEEEEecCCCcHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-ECCHHHH-----
Confidence 467899999999999999999876 457999999996 21 22 357888 8887652
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.....++.||+|+++.... .....+..+.++|+|||.+++.
T Consensus 118 ~~~~~~~~~fD~I~~~~~~~--------------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 118 GEKLELYPLFDVLFIDAAKG--------------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HHHHTTSCCEEEEEEEGGGS--------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHhcccCCCccEEEECCCHH--------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 11111246899999976421 1346788899999999999986
No 209
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.06 E-value=7.2e-11 Score=97.45 Aligned_cols=96 Identities=15% Similarity=0.073 Sum_probs=69.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.++.+|||+|||+|.++..+++. + .+|+|+|+++ |. .... .++ .+|+.+.. ++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~-~----------~~v~gvD~s~~~l~~a~~~~~~-~~~-~~d~~~~~--------~~ 111 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER-G----------FEVVLVDPSKEMLEVAREKGVK-NVV-EAKAEDLP--------FP 111 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT-T----------CEEEEEESCHHHHHHHHHHTCS-CEE-ECCTTSCC--------SC
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc-C----------CeEEEEeCCHHHHHHHHhhcCC-CEE-ECcHHHCC--------CC
Confidence 37889999999999999998875 2 5899999997 21 1112 266 78887632 45
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
++.||+|++.... .+ .......++.++.++|+|||.+++.++.
T Consensus 112 ~~~fD~v~~~~~~--------~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 112 SGAFEAVLALGDV--------LS--YVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp TTCEEEEEECSSH--------HH--HCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CCCEEEEEEcchh--------hh--ccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6789999995321 01 1012457889999999999999987654
No 210
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.06 E-value=1.2e-10 Score=109.24 Aligned_cols=109 Identities=14% Similarity=0.066 Sum_probs=74.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCC--CCeEEecCCCCChhHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPID--GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~--~~~~~~~~D~~~~~~~~ 126 (229)
.+|.+|||+|||+|+++..++.. ...+|++||+|+ + ..+. +++++ ++|+.+.
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~----------ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i-~~D~~~~---- 602 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG----------GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLI-QADCLAW---- 602 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEE-ESCHHHH----
T ss_pred cCCCcEEEeeechhHHHHHHHHC----------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEE-ecCHHHH----
Confidence 36899999999999999998874 346899999996 1 1233 57888 8886551
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
+. ..+++||+|++|++....+-...+.+........++..+.++|+|||.+++..-.
T Consensus 603 -l~--~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 603 -LR--EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp -HH--HCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -HH--hcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 21 2357899999998642211111111122344567888999999999999986644
No 211
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.06 E-value=1.7e-10 Score=98.32 Aligned_cols=127 Identities=18% Similarity=0.169 Sum_probs=85.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------C-------CCCCeEEecCCCCChh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------P-------IDGAVVLSKCDFTQPD 123 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~-------~~~~~~~~~~D~~~~~ 123 (229)
.++.+|||||||+|.++..++++. +..+|++||+++ +. . .++++++ .+|+.+.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~-~~D~~~~- 144 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP---------TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV-IDDARAY- 144 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST---------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE-ESCHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEE-EchHHHH-
Confidence 456899999999999999988763 456999999996 20 0 2467787 7875431
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCCCCCc-ccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC-----CCChHHHHHHH
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNATGMRE-MDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD-----GRNRPQLEESI 197 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~-~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~-----~~~~~~~~~~l 197 (229)
+. ..+++||+|++|..... +... .... .....+..+.++|+|||.|++.... ......+...+
T Consensus 145 ----l~--~~~~~fD~Ii~d~~~~~-~~~~~~~~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l 213 (314)
T 1uir_A 145 ----LE--RTEERYDVVIIDLTDPV-GEDNPARLL----YTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTV 213 (314)
T ss_dssp ----HH--HCCCCEEEEEEECCCCB-STTCGGGGG----SSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHH
T ss_pred ----HH--hcCCCccEEEECCCCcc-cccCcchhc----cHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHH
Confidence 11 13678999999875311 0000 0000 0246788899999999999986532 22356677788
Q ss_pred HhhCCeeEEEc
Q psy1489 198 TRFYSQVKILK 208 (229)
Q Consensus 198 ~~~F~~v~~~k 208 (229)
+..|..+....
T Consensus 214 ~~~F~~v~~~~ 224 (314)
T 1uir_A 214 REAFRYVRSYK 224 (314)
T ss_dssp HTTCSEEEEEE
T ss_pred HHHCCceEEEE
Confidence 88898876553
No 212
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.06 E-value=2.5e-10 Score=96.94 Aligned_cols=124 Identities=14% Similarity=0.041 Sum_probs=82.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------------CCCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------------PIDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------------~~~~~~~~~~~D~~~~~~ 124 (229)
.++.+|||||||+|.++..++++. +..+|++||+++ +. ..++++++ .+|..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~---------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~-~~Da~~--- 160 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP---------SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH-VGDGFE--- 160 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-ESCHHH---
T ss_pred CCCCEEEEECCCchHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE-ECcHHH---
Confidence 456899999999999999988763 457999999996 21 12457777 777543
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC----ChHHHHHHHHhh
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR----NRPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~----~~~~~~~~l~~~ 200 (229)
.+. ..+++||+|++|..... +. ..+ ......++.+.++|+|||.+++...... ....+.+.++..
T Consensus 161 --~l~--~~~~~fD~Ii~d~~~~~-~~--~~~----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 229 (304)
T 2o07_A 161 --FMK--QNQDAFDVIITDSSDPM-GP--AES----LFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSL 229 (304)
T ss_dssp --HHH--TCSSCEEEEEEECC------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHH
T ss_pred --HHh--hCCCCceEEEECCCCCC-Cc--chh----hhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHh
Confidence 121 13578999999875211 10 000 0124678889999999999998653321 135566777888
Q ss_pred CCeeEEE
Q psy1489 201 YSQVKIL 207 (229)
Q Consensus 201 F~~v~~~ 207 (229)
|..+...
T Consensus 230 f~~v~~~ 236 (304)
T 2o07_A 230 FPVVAYA 236 (304)
T ss_dssp CSEEEEE
T ss_pred CCCceeE
Confidence 9877665
No 213
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.06 E-value=1e-09 Score=93.57 Aligned_cols=98 Identities=17% Similarity=0.160 Sum_probs=71.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++.. |..+++++|++.+. .+ .++.+. .+|+.+..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~----- 228 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN---------PNAEIFGVDWASVLEVAKENARIQGVASRYHTI-AGSAFEVD----- 228 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC---------TTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEE-ESCTTTSC-----
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC---------CCCeEEEEecHHHHHHHHHHHHhcCCCcceEEE-ecccccCC-----
Confidence 567899999999999999999886 56799999998421 12 248888 99987631
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
++ ..||+|++.... +..+. ..+..+++.+.++|+|||.+++..+
T Consensus 229 ---~~-~~~D~v~~~~~l-----~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 229 ---YG-NDYDLVLLPNFL-----HHFDV----ATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp ---CC-SCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ---CC-CCCcEEEEcchh-----ccCCH----HHHHHHHHHHHHhCCCCcEEEEEee
Confidence 33 349999995432 11211 2345788999999999999887543
No 214
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.05 E-value=9e-11 Score=101.39 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=68.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++. +..+|+|+|+++|. .+ .+++++ .+|+.+..
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~----------g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~-~~d~~~~~----- 112 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA----------GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVI-PGKVEEVS----- 112 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT----------TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEE-ESCTTTCC-----
T ss_pred CCcCEEEEcCCCccHHHHHHHhC----------CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-EcchhhCC-----
Confidence 46889999999999999998875 34699999999742 22 467888 99988731
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+ +++||+|+++....... . +.....+..+.++|+|||.+++.
T Consensus 113 ---~-~~~~D~Ivs~~~~~~~~----~-----~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 113 ---L-PEQVDIIISEPMGYMLF----N-----ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ---C-SSCEEEEEECCCBTTBT----T-----TSHHHHHHHGGGGEEEEEEEESC
T ss_pred ---C-CCceeEEEEeCchhcCC----h-----HHHHHHHHHHHhhcCCCeEEEEe
Confidence 2 35799999975421111 0 11234566788999999999854
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.05 E-value=1.4e-10 Score=99.67 Aligned_cols=121 Identities=10% Similarity=0.044 Sum_probs=80.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC------------C--CCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY------------P--IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~------------~--~~~~~~~~~~D~~~~~~ 124 (229)
.++.+|||||||+|.++..++++. +..+|++||+++ +. . .++++++ .+|+.+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~---------~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~-~~D~~~--- 185 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA---------SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV-IGDGVA--- 185 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE-ESCHHH---
T ss_pred CCCCEEEEECCCccHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE-ECCHHH---
Confidence 456899999999999999988763 457999999996 21 0 2467888 887543
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC---CC-ChHHHHHHHHhh
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD---GR-NRPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~---~~-~~~~~~~~l~~~ 200 (229)
....+++++||+|++|.... .+ ..+. ......+..+.++|+|||.|++..-. .. ....+...++..
T Consensus 186 ---~l~~~~~~~fDlIi~d~~~p-~~--~~~~----l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 255 (334)
T 1xj5_A 186 ---FLKNAAEGSYDAVIVDSSDP-IG--PAKE----LFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREI 255 (334)
T ss_dssp ---HHHTSCTTCEEEEEECCCCT-TS--GGGG----GGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH
T ss_pred ---HHHhccCCCccEEEECCCCc-cC--cchh----hhHHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHh
Confidence 11113357899999987521 11 1111 01246788899999999999986322 11 134456667777
Q ss_pred CCe
Q psy1489 201 YSQ 203 (229)
Q Consensus 201 F~~ 203 (229)
|..
T Consensus 256 F~~ 258 (334)
T 1xj5_A 256 FKG 258 (334)
T ss_dssp CSS
T ss_pred Ccc
Confidence 874
No 216
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.05 E-value=1e-09 Score=95.36 Aligned_cols=100 Identities=20% Similarity=0.267 Sum_probs=73.9
Q ss_pred hhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------C-CCCCeEEecCCCCC
Q psy1489 54 SKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------P-IDGAVVLSKCDFTQ 121 (229)
Q Consensus 54 ~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~-~~~~~~~~~~D~~~ 121 (229)
..+. +.++.+|||+|||+|.++..+++.. |..+++++|+ + +. . ..++++. .+|+.+
T Consensus 196 ~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~-~~d~~~ 263 (369)
T 3gwz_A 196 AAYD-FSGAATAVDIGGGRGSLMAAVLDAF---------PGLRGTLLER-PPVAEEARELLTGRGLADRCEIL-PGDFFE 263 (369)
T ss_dssp HHSC-CTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEE-ECCTTT
T ss_pred HhCC-CccCcEEEEeCCCccHHHHHHHHHC---------CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEe-ccCCCC
Confidence 3443 3567899999999999999999886 6679999999 5 21 1 2468888 999875
Q ss_pred hhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 122 PDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 122 ~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+ ++. .||+|++.... +.++. ..+..+++.+.+.|+|||.+++..
T Consensus 264 ~---------~p~-~~D~v~~~~vl-----h~~~d----~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 264 T---------IPD-GADVYLIKHVL-----HDWDD----DDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp C---------CCS-SCSEEEEESCG-----GGSCH----HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred C---------CCC-CceEEEhhhhh-----ccCCH----HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 2 334 79999985532 22222 234578899999999999998754
No 217
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.05 E-value=1.3e-10 Score=95.00 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=69.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC-CCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID-GAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~-~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|..+..+++.++ +.++|+++|+++ +. .+. +++++ .+|..+.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~--------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~-~gda~~~----- 134 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIP--------DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFI-ESDAMLA----- 134 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSC--------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE-ESCHHHH-----
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-EcCHHHH-----
Confidence 3568999999999999999999864 468999999996 21 222 47777 7875441
Q ss_pred HHHHh----CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTIL----KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~----~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.... +.++||+|++|... . .....++.+.++|+|||.+++.
T Consensus 135 l~~l~~~~~~~~~fD~I~~d~~~--------~------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 135 LDNLLQGQESEGSYDFGFVDADK--------P------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HHHHHHSTTCTTCEEEEEECSCG--------G------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhccCCCCCcCEEEECCch--------H------HHHHHHHHHHHhcCCCeEEEEe
Confidence 11111 24689999998642 1 1245678889999999999885
No 218
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.05 E-value=2.8e-10 Score=98.13 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=73.5
Q ss_pred hhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-C--C------CCCCeEEecCCCCChhH
Q psy1489 54 SKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-Y--P------IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 54 ~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~--~------~~~~~~~~~~D~~~~~~ 124 (229)
+.+. +.++.+|||+|||+|.++..+++.. |..+++++|++++ . . .+++++. .+|+.++
T Consensus 178 ~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~-~~d~~~~-- 244 (348)
T 3lst_A 178 RAGD-FPATGTVADVGGGRGGFLLTVLREH---------PGLQGVLLDRAEVVARHRLDAPDVAGRWKVV-EGDFLRE-- 244 (348)
T ss_dssp HHSC-CCSSEEEEEETCTTSHHHHHHHHHC---------TTEEEEEEECHHHHTTCCCCCGGGTTSEEEE-ECCTTTC--
T ss_pred HhCC-ccCCceEEEECCccCHHHHHHHHHC---------CCCEEEEecCHHHhhcccccccCCCCCeEEE-ecCCCCC--
Confidence 3444 4567899999999999999999886 5678999998642 1 1 1247888 8998642
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
++ .||+|++.... +.++. ..+..+|+++.++|||||++++..
T Consensus 245 -------~p--~~D~v~~~~vl-----h~~~d----~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 245 -------VP--HADVHVLKRIL-----HNWGD----EDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp -------CC--CCSEEEEESCG-----GGSCH----HHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred -------CC--CCcEEEEehhc-----cCCCH----HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 33 89999985532 22222 234578999999999999998754
No 219
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.05 E-value=7.5e-11 Score=93.13 Aligned_cols=94 Identities=10% Similarity=-0.135 Sum_probs=65.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC-------CCCC--eEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP-------IDGA--VVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~-------~~~~--~~~~~~D~~~~~~~~~i 128 (229)
+.+.++|||||||+|.++..++... |..+|+|+|+++ |.. ..++ .+. ..|...
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~---------p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~-~~d~~~------- 109 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNEN---------EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYR-FLNKES------- 109 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSS---------CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEE-EECCHH-------
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcC---------CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEE-Eecccc-------
Confidence 5678899999999999999987654 667999999997 311 1122 222 333321
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
..++++||+|++.- .+..++....++..+.+.|+|||.||-
T Consensus 110 --~~~~~~~DvVLa~k-----------~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 110 --DVYKGTYDVVFLLK-----------MLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp --HHTTSEEEEEEEET-----------CHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred --cCCCCCcChhhHhh-----------HHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 24578899999933 233334455667789999999999885
No 220
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.04 E-value=4.9e-10 Score=91.28 Aligned_cols=109 Identities=9% Similarity=0.135 Sum_probs=79.6
Q ss_pred CccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CCCC-CCeEEecCCCCChhH
Q psy1489 57 KFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YPID-GAVVLSKCDFTQPDI 124 (229)
Q Consensus 57 ~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~~~-~~~~~~~~D~~~~~~ 124 (229)
.++++|.+|+|+|||+|.++..+++.. +..+|+|+|+++- ..+. .+++. .+|..+.
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~---------~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~-~gD~l~~-- 84 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMG---------YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVR-LANGLSA-- 84 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTT---------CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEE-ECSGGGG--
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-ECchhhc--
Confidence 446789999999999999999999863 5679999999971 1233 47888 8987663
Q ss_pred HHHHHHHhCC-CCccEEE-eCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh
Q psy1489 125 QDRLVTILKD-DKLDVVL-SDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~-~~~D~V~-sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~ 200 (229)
+.+ ..||+|+ +.|. . ++...++..+...|+++|+||+.-.. ....+.+.|...
T Consensus 85 -------~~~~~~~D~IviaGmG----------g----~lI~~IL~~~~~~l~~~~~lIlqp~~--~~~~lr~~L~~~ 139 (230)
T 3lec_A 85 -------FEEADNIDTITICGMG----------G----RLIADILNNDIDKLQHVKTLVLQPNN--REDDLRKWLAAN 139 (230)
T ss_dssp -------CCGGGCCCEEEEEEEC----------H----HHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHT
T ss_pred -------cccccccCEEEEeCCc----------h----HHHHHHHHHHHHHhCcCCEEEEECCC--ChHHHHHHHHHC
Confidence 222 3699876 4331 1 23456778888999999999986543 467777777665
No 221
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.03 E-value=5.4e-11 Score=96.29 Aligned_cols=98 Identities=11% Similarity=0.263 Sum_probs=69.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------C-----CCCCeEEecCCCCCh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------P-----IDGAVVLSKCDFTQP 122 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~-----~~~~~~~~~~D~~~~ 122 (229)
++++.+|||+|||+|.++..+++..+..+ ..+.++|+++|+++ +. . ..++.+. .+|+.+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~---~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~ 157 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKG---VDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV-EGDGRKG 157 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSC---CCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE-ESCGGGC
T ss_pred CCCCCEEEEECCCccHHHHHHHHhccccc---CCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE-ECCcccC
Confidence 56789999999999999999998764000 00035999999997 21 0 3467788 8887652
Q ss_pred hHHHHHHHHhC-CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 123 DIQDRLVTILK-DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 123 ~~~~~i~~~~~-~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
++ .+.||+|+++.... . +...+.++|+|||.+++.+..
T Consensus 158 ---------~~~~~~fD~I~~~~~~~-----~------------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 158 ---------YPPNAPYNAIHVGAAAP-----D------------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp ---------CGGGCSEEEEEECSCBS-----S------------CCHHHHHTEEEEEEEEEEESC
T ss_pred ---------CCcCCCccEEEECCchH-----H------------HHHHHHHHhcCCCEEEEEEec
Confidence 22 36899999977531 1 124578899999999997764
No 222
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.03 E-value=9.9e-10 Score=95.39 Aligned_cols=96 Identities=10% Similarity=0.093 Sum_probs=72.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC----CCCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI----YPIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~----~~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
+.++.+|||+|||+|.++..+++.. |..+++++|+..+ ...++++++ .+|+.++ ++.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~~~~~~a~~~~~v~~~-~~D~~~~---------~p~ 259 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY---------PTIKGVNFDLPHVISEAPQFPGVTHV-GGDMFKE---------VPS 259 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEECHHHHTTCCCCTTEEEE-ECCTTTC---------CCC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC---------CCCeEEEecCHHHHHhhhhcCCeEEE-eCCcCCC---------CCC
Confidence 4567899999999999999999886 6679999999432 223578999 9998762 343
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
. |+|++.... +.+.. +.+..+|+.+.+.|+|||++++..
T Consensus 260 ~--D~v~~~~vl-----h~~~d----~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 260 G--DTILMKWIL-----HDWSD----QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp C--SEEEEESCG-----GGSCH----HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred C--CEEEehHHh-----ccCCH----HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 999985532 22222 345678999999999999998754
No 223
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.03 E-value=1.7e-10 Score=94.03 Aligned_cols=100 Identities=12% Similarity=0.108 Sum_probs=69.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCC-CCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PID-GAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~-~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|.++..+++..+ +.++|+++|+++ +. ... .+.++ .+|+.+. ...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~-~~d~~~~--~~~ 127 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALP--------EDGKILCCDVSEEWTNVARKYWKENGLENKIFLK-LGSALET--LQV 127 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSC--------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE-ESCHHHH--HHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEE-ECCHHHH--HHH
Confidence 4678999999999999999998863 357999999997 21 122 37777 7775431 111
Q ss_pred HHH---------HhCC--CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 128 LVT---------ILKD--DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 128 i~~---------~~~~--~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+.. .+++ +.||+|+++... + .....+..+.++|+|||.+++..
T Consensus 128 ~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~--------~------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 128 LIDSKSAPSWASDFAFGPSSIDLFFLDADK--------E------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHCSSCCGGGTTTCCSTTCEEEEEECSCG--------G------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHhhcccccccccccCCCCCcCEEEEeCCH--------H------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 110 0222 689999997531 1 12356788999999999999854
No 224
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.03 E-value=2.7e-09 Score=92.87 Aligned_cols=109 Identities=11% Similarity=0.064 Sum_probs=74.9
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
++.+|||+| |+|.++..++... +.++|+|+|+++ |. .+.+++++ ++|+.+. +.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~---------~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~-~~D~~~~-----l~ 235 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG---------LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIF-TFDLRKP-----LP 235 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT---------CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEE-CCCTTSC-----CC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEE-EChhhhh-----ch
Confidence 578999999 9999999988763 457999999996 21 23368899 9998762 00
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEE-EEeecC-CCCh---HHHHHHHH
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADC-LIKIWD-GRNR---PQLEESIT 198 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~-v~~~~~-~~~~---~~~~~~l~ 198 (229)
. ..++.||+|++|++.. .. . ...++..+.++|+|||++ ++.+.. .... ..+.+.+.
T Consensus 236 ~-~~~~~fD~Vi~~~p~~--------~~---~-~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (373)
T 2qm3_A 236 D-YALHKFDTFITDPPET--------LE---A-IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLL 296 (373)
T ss_dssp T-TTSSCBSEEEECCCSS--------HH---H-HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred h-hccCCccEEEECCCCc--------hH---H-HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHH
Confidence 0 0135899999987531 11 1 267889999999999955 554443 1333 34445554
No 225
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.02 E-value=6e-10 Score=95.87 Aligned_cols=108 Identities=18% Similarity=0.188 Sum_probs=76.8
Q ss_pred hhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCC
Q psy1489 51 EIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDF 119 (229)
Q Consensus 51 ~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~ 119 (229)
++...+.+.+.+.+|||+|||+|.++..+++.. |..+++++|+..+. .+ .+++++ .+|+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~-~~d~ 238 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRH---------PQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFF-EKNL 238 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHC---------TTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEE-ECCT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhC---------CCCeEEEEECHHHHHHHHHHHHhcCCCCceEEE-eCCc
Confidence 344455533337899999999999999999886 56799999994331 11 248888 9998
Q ss_pred CChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 120 TQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.+... +.++.||+|++.... +.++. ..+..+++.+.++|+|||.+++..
T Consensus 239 ~~~~~-------~~~~~~D~v~~~~vl-----h~~~~----~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 239 LDARN-------FEGGAADVVMLNDCL-----HYFDA----REAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp TCGGG-------GTTCCEEEEEEESCG-----GGSCH----HHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCcc-------cCCCCccEEEEeccc-----ccCCH----HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 87420 135679999995532 22222 235678999999999999998754
No 226
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.01 E-value=1.2e-09 Score=96.69 Aligned_cols=98 Identities=13% Similarity=0.065 Sum_probs=68.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C---C--------------C--CCCCeEEecCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I---Y--------------P--IDGAVVLSKCD 118 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~---~--------------~--~~~~~~~~~~D 118 (229)
+.++.+|||||||+|.++..+++.. +..+|+|+|+++ + . . ..+++++ .+|
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~---------g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i-~gD 309 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALEC---------GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS-LKK 309 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH---------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE-ESS
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE-EcC
Confidence 4678999999999999999999876 345899999986 2 1 1 3467777 765
Q ss_pred CC-ChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 119 FT-QPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 119 ~~-~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.. +... +.. ....||+|+++... . . .....+|.++.++|||||.+++.
T Consensus 310 ~~~~~~~---~~~--~~~~FDvIvvn~~l-----~--~-----~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 310 SFVDNNR---VAE--LIPQCDVILVNNFL-----F--D-----EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CSTTCHH---HHH--HGGGCSEEEECCTT-----C--C-----HHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccccc---ccc--ccCCCCEEEEeCcc-----c--c-----ccHHHHHHHHHHhCCCCeEEEEe
Confidence 43 2111 111 13579999986432 0 0 11235678899999999999875
No 227
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.01 E-value=2e-09 Score=90.08 Aligned_cols=116 Identities=21% Similarity=0.146 Sum_probs=72.3
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeC-CC-CC------------C---C-----CCCeEEecC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDK-LP-IY------------P---I-----DGAVVLSKC 117 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~-~~-~~------------~---~-----~~~~~~~~~ 117 (229)
.++.+|||||||+|.++..+++. +..+|+|+|+ ++ +. . + .++.+. ..
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~----------~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~-~~ 146 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA----------GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVV-PY 146 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT----------TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEE-EC
T ss_pred cCCCeEEEecccccHHHHHHHHc----------CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEE-Ee
Confidence 46789999999999999988764 2359999999 65 20 1 1 245565 56
Q ss_pred CCCChhHHHHHHHHhCCCCccEEEe-CCCCCCCCCCcccHHHHHHHHHHHHHHHHHccc---C--CCEEEEeecCC----
Q psy1489 118 DFTQPDIQDRLVTILKDDKLDVVLS-DMAPNATGMREMDHDLITQLAIAVIRFAVTYSK---P--GADCLIKIWDG---- 187 (229)
Q Consensus 118 D~~~~~~~~~i~~~~~~~~~D~V~s-d~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lk---p--gG~~v~~~~~~---- 187 (229)
|+.+.. ..+...+.++.||+|++ |... +. .....++..+.++|+ | ||.+++..-..
T Consensus 147 ~~~~~~--~~~~~~~~~~~fD~Ii~~dvl~-----~~-------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~ 212 (281)
T 3bzb_A 147 RWGDSP--DSLQRCTGLQRFQVVLLADLLS-----FH-------QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHL 212 (281)
T ss_dssp CTTSCT--HHHHHHHSCSSBSEEEEESCCS-----CG-------GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----
T ss_pred cCCCcc--HHHHhhccCCCCCEEEEeCccc-----Ch-------HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeeccc
Confidence 655421 11222224678999997 4321 11 113467788899999 9 99877632221
Q ss_pred -CChHHHHHHHHhh
Q psy1489 188 -RNRPQLEESITRF 200 (229)
Q Consensus 188 -~~~~~~~~~l~~~ 200 (229)
.....+++.++..
T Consensus 213 ~~~~~~~~~~l~~~ 226 (281)
T 3bzb_A 213 AERDLAFFRLVNAD 226 (281)
T ss_dssp ---CTHHHHHHHHS
T ss_pred chhHHHHHHHHHhc
Confidence 1245677767664
No 228
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.01 E-value=8.7e-10 Score=90.52 Aligned_cols=110 Identities=12% Similarity=0.054 Sum_probs=79.3
Q ss_pred CccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CCCC-CCeEEecCCCCChhH
Q psy1489 57 KFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YPID-GAVVLSKCDFTQPDI 124 (229)
Q Consensus 57 ~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~~~-~~~~~~~~D~~~~~~ 124 (229)
.++++|.+|||+|||+|.++..+++.. +..+|+|+|+++- ..+. .+++. .+|..+.
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~---------~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~-~gD~l~~-- 84 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQ---------TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVR-KGNGLAV-- 84 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTT---------SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEE-ECSGGGG--
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE-ecchhhc--
Confidence 446789999999999999999999863 5679999999971 1233 37788 8887652
Q ss_pred HHHHHHHhCCC-CccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh
Q psy1489 125 QDRLVTILKDD-KLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~~-~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~ 200 (229)
+.+. .||+|++.+. | . .+...++..+...|+++|+||+.-.. ....+.+.|...
T Consensus 85 -------~~~~~~~D~Iviagm----G-----g----~lI~~IL~~~~~~L~~~~~lIlq~~~--~~~~lr~~L~~~ 139 (244)
T 3gnl_A 85 -------IEKKDAIDTIVIAGM----G-----G----TLIRTILEEGAAKLAGVTKLILQPNI--AAWQLREWSEQN 139 (244)
T ss_dssp -------CCGGGCCCEEEEEEE----C-----H----HHHHHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHH
T ss_pred -------cCccccccEEEEeCC----c-----h----HHHHHHHHHHHHHhCCCCEEEEEcCC--ChHHHHHHHHHC
Confidence 2233 5998875221 1 1 23456788899999999999986543 467777777665
No 229
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.00 E-value=6.6e-11 Score=94.56 Aligned_cols=93 Identities=14% Similarity=0.054 Sum_probs=66.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|..+..+++..+ +.++|+++|+++ +. .+ ..++++ .+|..+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~------ 119 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAIS--------ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQ-VGDPLG------ 119 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSC--------TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEE-ESCHHH------
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEE-EecHHH------
Confidence 3568999999999999999998753 367999999997 21 11 246777 777543
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
....+ ++ ||+|++|... .+ ....+..+.++|+|||.+++.
T Consensus 120 ~~~~~-~~-fD~v~~~~~~-------~~-------~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 120 IAAGQ-RD-IDILFMDCDV-------FN-------GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp HHTTC-CS-EEEEEEETTT-------SC-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred HhccC-CC-CCEEEEcCCh-------hh-------hHHHHHHHHHhcCCCeEEEEE
Confidence 11112 35 9999998532 11 235788899999999999874
No 230
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.00 E-value=4.8e-10 Score=98.39 Aligned_cols=110 Identities=19% Similarity=0.141 Sum_probs=73.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCC-C-CCeEEecCCCCChhHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPI-D-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~-~-~~~~~~~~D~~~~~~~~ 126 (229)
.++.+|||+|||+|+++..++.. ...+|+|+|+++ + ..+ . +++++ .+|+.+.
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~----------g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~-~~D~~~~---- 283 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG----------GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV-RDDVFKL---- 283 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT----------TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE-ESCHHHH----
T ss_pred hCCCeEEEeeccCCHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEE-ECCHHHH----
Confidence 46889999999999999999875 236999999996 1 123 3 67788 8886552
Q ss_pred HHHHH-hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC
Q psy1489 127 RLVTI-LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 127 ~i~~~-~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
+... ..+..||+|++|++......... ..........+..+.++|+|||.+++.....
T Consensus 284 -~~~~~~~~~~fD~Ii~dpP~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 284 -LRTYRDRGEKFDVIVMDPPKFVENKSQL--MGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp -HHHHHHTTCCEEEEEECCSSTTTCSSSS--SCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -HHHHHhcCCCCCEEEECCCCCCCChhHH--HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 1111 12468999999976321111000 0001123467788999999999999876543
No 231
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.00 E-value=8.2e-10 Score=95.23 Aligned_cols=95 Identities=13% Similarity=0.175 Sum_probs=71.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----CCCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----YPIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----~~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
+.++.+|||+|||+|.++..+++.. |..+++++|+ + + ...++++++ .+|+.+. ++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~v~~~-~~d~~~~---------~p 245 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF---------PKLKCIVFDR-PQVVENLSGSNNLTYV-GGDMFTS---------IP 245 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEEC-HHHHTTCCCBTTEEEE-ECCTTTC---------CC
T ss_pred cccCceEEEeCCCccHHHHHHHHHC---------CCCeEEEeeC-HHHHhhcccCCCcEEE-eccccCC---------CC
Confidence 4567899999999999999999876 5679999999 5 2 123568888 8998652 33
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccC---CCEEEEee
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKP---GADCLIKI 184 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp---gG~~v~~~ 184 (229)
.||+|++.... +.++. ..+..+++.+.++|+| ||++++..
T Consensus 246 --~~D~v~~~~~l-----h~~~d----~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 246 --NADAVLLKYIL-----HNWTD----KDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp --CCSEEEEESCG-----GGSCH----HHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred --CccEEEeehhh-----ccCCH----HHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 39999996543 22222 2345789999999999 99998764
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.00 E-value=3.1e-09 Score=88.34 Aligned_cols=126 Identities=11% Similarity=-0.051 Sum_probs=83.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----C---------CCCCeEEecCCCCChhH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----P---------IDGAVVLSKCDFTQPDI 124 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~---------~~~~~~~~~~D~~~~~~ 124 (229)
..+.+|||+|||+|..+..+++. + .+|+++|+++ +. . .++++++ .+|..+.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~----------~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~-~~D~~~~-- 136 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY----------D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHA-KQLLDLD-- 136 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS----------S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEE-SSGGGSC--
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC----------C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEE-echHHHH--
Confidence 34689999999999998887765 3 6999999996 21 1 1346677 7765541
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC-C---hHHHHHHHHhh
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR-N---RPQLEESITRF 200 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~-~---~~~~~~~l~~~ 200 (229)
+ ++||+|++|... .. ..++.+.+.|+|||.+++...... . ...+...++..
T Consensus 137 -------~--~~fD~Ii~d~~d---------p~-------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 191 (262)
T 2cmg_A 137 -------I--KKYDLIFCLQEP---------DI-------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGV 191 (262)
T ss_dssp -------C--CCEEEEEESSCC---------CH-------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTT
T ss_pred -------H--hhCCEEEECCCC---------hH-------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHh
Confidence 1 679999998531 11 167789999999999998653321 2 34455667777
Q ss_pred CCeeEEEcCCCCCCCCceEEEEecc
Q psy1489 201 YSQVKILKPPSSRSHSAELFLLGRG 225 (229)
Q Consensus 201 F~~v~~~kp~~sr~~s~E~Y~v~~~ 225 (229)
|..+..+.....- ...-.|++|.+
T Consensus 192 F~~~~~~~~~vP~-~g~~~~~~as~ 215 (262)
T 2cmg_A 192 FSVAMPFVAPLRI-LSNKGYIYASF 215 (262)
T ss_dssp CSEEEEECCTTCT-TCCEEEEEEES
T ss_pred CCceEEEEEccCC-CcccEEEEeeC
Confidence 9887766532111 33344556653
No 233
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.99 E-value=3.1e-10 Score=102.07 Aligned_cols=96 Identities=21% Similarity=0.275 Sum_probs=68.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++. +..+|+|+|++++. .+ .+++++ .+|+.+..
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~----------~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~-~~d~~~~~----- 220 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA----------GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVI-PGKVEEVS----- 220 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT----------TCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEE-ESCTTTCC-----
T ss_pred cCCCEEEEecCcccHHHHHHHHc----------CCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEE-ECchhhCc-----
Confidence 36789999999999999988874 45699999999731 22 468888 99988731
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+ .++||+|+++.+. .....+.....+..+.++|+|||.+++.+
T Consensus 221 ---~-~~~fD~Ivs~~~~---------~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 221 ---L-PEQVDIIISEPMG---------YMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp ---C-SSCEEEEECCCCH---------HHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred ---c-CCCeEEEEEeCch---------HhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 3579999996531 11111223445667889999999998543
No 234
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.98 E-value=2e-11 Score=99.49 Aligned_cols=91 Identities=19% Similarity=-0.001 Sum_probs=62.3
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
++.+|||+|||+|.++..+++.. .+|+|+|+++ +. .+ +++.++ .+|+.+.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~------ 139 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-----------MRVIAIDIDPVKIALARNNAEVYGIADKIEFI-CGDFLLL------ 139 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-----------CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE-ESCHHHH------
T ss_pred CCCEEEECccccCHHHHHHHHcC-----------CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEE-ECChHHh------
Confidence 78999999999999999998752 6999999997 21 12 367888 8886542
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+++.||+|+++.+...... . ...+..+.++|+|||.+++.
T Consensus 140 ---~~~~~~D~v~~~~~~~~~~~--~---------~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 140 ---ASFLKADVVFLSPPWGGPDY--A---------TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ---GGGCCCSEEEECCCCSSGGG--G---------GSSSBCTTTSCSSCHHHHHH
T ss_pred ---cccCCCCEEEECCCcCCcch--h---------hhHHHHHHhhcCCcceeHHH
Confidence 24578999999876422111 0 11233456667777765543
No 235
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.98 E-value=2.4e-10 Score=93.02 Aligned_cols=96 Identities=14% Similarity=0.175 Sum_probs=68.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
.++.+|||+|||+|..+..+++.++ +.++|+++|+++ +. .+ ..+.++ .+|+.+.
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~--------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~-~~d~~~~----- 136 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLP--------PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLR-LGPALAT----- 136 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSC--------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE-ESCHHHH-----
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE-EcCHHHH-----
Confidence 3578999999999999999998763 357999999997 21 12 246777 7775431
Q ss_pred HHHHh-CC--CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 128 LVTIL-KD--DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 128 i~~~~-~~--~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.... .+ +.||+|++|... ......+..+.++|+|||.+++.
T Consensus 137 l~~l~~~~~~~~fD~V~~d~~~--------------~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 137 LEQLTQGKPLPEFDLIFIDADK--------------RNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp HHHHHTSSSCCCEEEEEECSCG--------------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHhcCCCCCcCEEEECCCH--------------HHHHHHHHHHHHHcCCCeEEEEe
Confidence 22221 12 689999998642 11245678899999999999985
No 236
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.96 E-value=2.7e-10 Score=92.02 Aligned_cols=91 Identities=21% Similarity=0.216 Sum_probs=66.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++ +. ...++.++ .+|+.+..
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~-~~d~~~~~------ 129 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV-----------DKVVSVEINEKMYNYASKLLSYYNNIKLI-LGDGTLGY------ 129 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-----------SEEEEEESCHHHHHHHHHHHTTCSSEEEE-ESCGGGCC------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc-----------CEEEEEeCCHHHHHHHHHHHhhcCCeEEE-ECCccccc------
Confidence 4678899999999999999998863 5999999996 21 11167888 88876511
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
..+++||+|+++.... .. ...+.++|+|||.+++.+..
T Consensus 130 --~~~~~fD~v~~~~~~~-----~~------------~~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 130 --EEEKPYDRVVVWATAP-----TL------------LCKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp --GGGCCEEEEEESSBBS-----SC------------CHHHHHTEEEEEEEEEEECS
T ss_pred --ccCCCccEEEECCcHH-----HH------------HHHHHHHcCCCcEEEEEEcC
Confidence 1246899999976531 11 12478899999999987644
No 237
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.96 E-value=2.9e-10 Score=92.52 Aligned_cols=92 Identities=17% Similarity=0.327 Sum_probs=67.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++.. + ++|+++|+++ + ..+.++.+. .+|+...
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~---------~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~-~~d~~~~----- 152 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIV---------K-TDVYTIERIPELVEFAKRNLERAGVKNVHVI-LGDGSKG----- 152 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHH---------C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEE-ESCGGGC-----
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHh---------C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEE-ECCcccC-----
Confidence 4578899999999999999999886 4 6999999996 1 123467788 8886221
Q ss_pred HHHHhC-CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC
Q psy1489 128 LVTILK-DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 128 i~~~~~-~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
++ ...||+|+++.... .. ...+.+.|+|||.+++.+...
T Consensus 153 ----~~~~~~fD~Ii~~~~~~-----~~------------~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 153 ----FPPKAPYDVIIVTAGAP-----KI------------PEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp ----CGGGCCEEEEEECSBBS-----SC------------CHHHHHTEEEEEEEEEEECSS
T ss_pred ----CCCCCCccEEEECCcHH-----HH------------HHHHHHhcCCCcEEEEEEecC
Confidence 22 23599999976531 11 124788999999999977543
No 238
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.96 E-value=4.6e-10 Score=105.51 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=71.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-----C-----------CCCCCeEEecCCCCCh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-----Y-----------PIDGAVVLSKCDFTQP 122 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-----~-----------~~~~~~~~~~~D~~~~ 122 (229)
.++.+|||||||+|.++..+++..+ +..+|+|+|+++ | . ..+++.++ ++|+.+.
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~--------p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefi-qGDa~dL 790 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPT--------SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLY-DGSILEF 790 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCC--------CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEE-ESCTTSC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC--------CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEE-ECchHhC
Confidence 3688999999999999999887642 346999999996 2 1 23468888 9999874
Q ss_pred hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 123 DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 123 ~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
. +.++.||+|++.... +..+. .....++.++.++|||| .+++.+
T Consensus 791 p--------~~d~sFDlVV~~eVL-----eHL~d----p~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 791 D--------SRLHDVDIGTCLEVI-----EHMEE----DQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp C--------TTSCSCCEEEEESCG-----GGSCH----HHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred C--------cccCCeeEEEEeCch-----hhCCh----HHHHHHHHHHHHHcCCC-EEEEEe
Confidence 2 346789999996543 11111 22346788999999999 776654
No 239
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.95 E-value=3.3e-09 Score=90.55 Aligned_cols=92 Identities=11% Similarity=0.150 Sum_probs=69.7
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC-----------CCCCeEEecCCCCChhHHHHHHH
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP-----------IDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~-----------~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+|||+|||+|.++..+++.. |..+++++|+ + +.. ..+++++ .+|+.++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~-------- 229 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE---------PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLV-GGDMLQE-------- 229 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC---------TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEE-ESCTTTC--------
T ss_pred CEEEEeCCCchHHHHHHHHHC---------CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEe-cCCCCCC--------
Confidence 899999999999999999886 5679999999 6 321 1358888 8998762
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
++ +.||+|++.... +.++. ..+..+++.+.+.|+|||.+++..
T Consensus 230 -~~-~~~D~v~~~~vl-----~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 230 -VP-SNGDIYLLSRII-----GDLDE----AASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp -CC-SSCSEEEEESCG-----GGCCH----HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred -CC-CCCCEEEEchhc-----cCCCH----HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 33 579999986532 22222 234578899999999999998764
No 240
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.95 E-value=3.1e-09 Score=88.64 Aligned_cols=107 Identities=19% Similarity=0.188 Sum_probs=68.5
Q ss_pred CeeEeecCCC--CchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------C--CCCCeEEecCCCCChhHHHHHH
Q psy1489 63 LKVLDCGAAP--GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------P--IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 63 ~~VLDlGcGp--G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~--~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.+|||||||+ ++.+..++++.. |.++|++||.++ |. . ..++.++ ++|+.+.... +.
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~--------P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v-~aD~~~~~~~--l~ 148 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVA--------PESRVVYVDNDPIVLTLSQGLLASTPEGRTAYV-EADMLDPASI--LD 148 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHC--------TTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEE-ECCTTCHHHH--HT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHC--------CCCEEEEEeCChHHHHHHHHHhccCCCCcEEEE-EecccChhhh--hc
Confidence 6899999997 555666666654 778999999997 31 1 1247889 9999986421 00
Q ss_pred HHhCCCCcc-----EEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC
Q psy1489 130 TILKDDKLD-----VVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR 188 (229)
Q Consensus 130 ~~~~~~~~D-----~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~ 188 (229)
.......|| .|++++.... ..++ +....++..+.+.|+|||.|++..+...
T Consensus 149 ~~~~~~~~D~~~p~av~~~avLH~----l~d~----~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 149 APELRDTLDLTRPVALTVIAIVHF----VLDE----DDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CHHHHTTCCTTSCCEEEEESCGGG----SCGG----GCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred ccccccccCcCCcchHHhhhhHhc----CCch----hhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 000012344 5667654311 1111 1134678889999999999999876643
No 241
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.95 E-value=3.6e-10 Score=99.49 Aligned_cols=124 Identities=10% Similarity=0.043 Sum_probs=80.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---CCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---PIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
+.++.+|||+|||+|.++..+++. + .+|+|+|+++ |. .-.++... ... ........+. +++
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~-g----------~~v~gvD~s~~~~~~a~~~~~~~~-~~~-~~~~~~~~l~--~~~ 169 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEA-G----------VRHLGFEPSSGVAAKAREKGIRVR-TDF-FEKATADDVR--RTE 169 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHT-T----------CEEEEECCCHHHHHHHHTTTCCEE-CSC-CSHHHHHHHH--HHH
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc-C----------CcEEEECCCHHHHHHHHHcCCCcc-eee-echhhHhhcc--cCC
Confidence 457889999999999999998875 2 4999999997 21 11234333 222 2222222222 346
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC-------------------CCChHHHHH
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD-------------------GRNRPQLEE 195 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~-------------------~~~~~~~~~ 195 (229)
++||+|++..... +. .....+++++.++|||||.+++.... .....++..
T Consensus 170 ~~fD~I~~~~vl~--------h~---~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 238 (416)
T 4e2x_A 170 GPANVIYAANTLC--------HI---PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQG 238 (416)
T ss_dssp CCEEEEEEESCGG--------GC---TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHH
T ss_pred CCEEEEEECChHH--------hc---CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHH
Confidence 7899999966431 11 12457889999999999999986532 012456777
Q ss_pred HHHhh-CCeeEEEc
Q psy1489 196 SITRF-YSQVKILK 208 (229)
Q Consensus 196 ~l~~~-F~~v~~~k 208 (229)
.++.. |..+.+..
T Consensus 239 ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 239 MAQRCGFELVDVQR 252 (416)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHcCCEEEEEEE
Confidence 77665 65555443
No 242
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.95 E-value=1.5e-09 Score=94.04 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=72.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
....+|||+|||+|.++..+++.. |..+++++|+..+. .+ .+++++ .+|+.+..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~~----- 242 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN---------KEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGH-GANLLDRD----- 242 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS---------TTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEE-ECCCCSSS-----
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC---------CCCEEEEEeCHHHHHHHHHHHHhcCcccceEEE-EccccccC-----
Confidence 356899999999999999999886 66799999983221 11 358888 99988731
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
..++ +.||+|++.... +.++. ..+..+|+.+.++|+|||++++..
T Consensus 243 -~~~p-~~~D~v~~~~vl-----h~~~~----~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 243 -VPFP-TGFDAVWMSQFL-----DCFSE----EEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp -CCCC-CCCSEEEEESCS-----TTSCH----HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred -CCCC-CCcCEEEEechh-----hhCCH----HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 0033 679999986543 22222 234578899999999999998744
No 243
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.94 E-value=1.8e-10 Score=92.88 Aligned_cols=102 Identities=15% Similarity=0.258 Sum_probs=70.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------C-----CCCCeEEecCCCCCh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------P-----IDGAVVLSKCDFTQP 122 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~-----~~~~~~~~~~D~~~~ 122 (229)
++++.+|||+|||+|.++..+++..+. ...+.++|+|+|+++ +. . ..++.++ .+|+.+.
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~----~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~ 152 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNV----LENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKII-HKNIYQV 152 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTT----TTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEE-ECCGGGC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcc----cCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEE-ECChHhc
Confidence 567899999999999999999987520 000236999999996 21 1 3468888 8887652
Q ss_pred hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 123 DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 123 ~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
... .. ...++||+|+++.... .++..+.++|+|||.+++.+..
T Consensus 153 ~~~-~~---~~~~~fD~I~~~~~~~-----------------~~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 153 NEE-EK---KELGLFDAIHVGASAS-----------------ELPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CHH-HH---HHHCCEEEEEECSBBS-----------------SCCHHHHHHEEEEEEEEEEEEE
T ss_pred ccc-cC---ccCCCcCEEEECCchH-----------------HHHHHHHHhcCCCcEEEEEEcc
Confidence 100 00 1246799999977531 1235578899999999987654
No 244
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.94 E-value=1.7e-09 Score=85.49 Aligned_cols=106 Identities=19% Similarity=0.129 Sum_probs=67.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++ +. ...+++++ ++|+.+ ++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~---------~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~d~~~----------~~ 108 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G---------AESVTAFDIDPDAIETAKRNCGGVNFM-VADVSE----------IS 108 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T---------BSEEEEEESCHHHHHHHHHHCTTSEEE-ECCGGG----------CC
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C---------CCEEEEEECCHHHHHHHHHhcCCCEEE-ECcHHH----------CC
Confidence 46789999999999999998875 2 35899999997 21 12378888 898776 22
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF 200 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~ 200 (229)
+.||+|++|++..... . ......+..+.+.| |+.+++ . .......+.+.+...
T Consensus 109 -~~~D~v~~~~p~~~~~-----~----~~~~~~l~~~~~~~--g~~~~~-~-~~~~~~~~~~~~~~~ 161 (200)
T 1ne2_A 109 -GKYDTWIMNPPFGSVV-----K----HSDRAFIDKAFETS--MWIYSI-G-NAKARDFLRREFSAR 161 (200)
T ss_dssp -CCEEEEEECCCC----------------CHHHHHHHHHHE--EEEEEE-E-EGGGHHHHHHHHHHH
T ss_pred -CCeeEEEECCCchhcc-----C----chhHHHHHHHHHhc--CcEEEE-E-cCchHHHHHHHHHHC
Confidence 6899999987642111 0 11235677777777 443333 2 223334445555543
No 245
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.92 E-value=5.6e-09 Score=82.80 Aligned_cols=108 Identities=19% Similarity=0.133 Sum_probs=68.0
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CC---C-CCeEEecCCCCChhHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PI---D-GAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~---~-~~~~~~~~D~~~~~~~~~i~ 129 (229)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++ +. .. . ++.++ .+|+.+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~---------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~d~~~-------- 108 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-G---------AKEVICVEVDKEAVDVLIENLGEFKGKFKVF-IGDVSE-------- 108 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-T---------CSEEEEEESCHHHHHHHHHHTGGGTTSEEEE-ESCGGG--------
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-C---------CCEEEEEECCHHHHHHHHHHHHHcCCCEEEE-ECchHH--------
Confidence 46789999999999999998875 2 35899999996 21 01 1 57888 888765
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHhh
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITRF 200 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~ 200 (229)
+ +..||+|++|++...... .. ....+..+.++| ||.+++.+........+.+.+...
T Consensus 109 --~-~~~~D~v~~~~p~~~~~~-~~--------~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~ 165 (207)
T 1wy7_A 109 --F-NSRVDIVIMNPPFGSQRK-HA--------DRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEH 165 (207)
T ss_dssp --C-CCCCSEEEECCCCSSSST-TT--------THHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHT
T ss_pred --c-CCCCCEEEEcCCCccccC-Cc--------hHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHC
Confidence 2 248999999987532211 11 124566677777 554444321222233344555544
No 246
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.92 E-value=1.1e-09 Score=95.55 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=75.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
..++.+|||+|||+|.++..++... +.++|+|+|+++ |. .+ .++++. ++|+.+..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~---------~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~-~~D~~~~~--- 281 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR---------YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFI-QGDATQLS--- 281 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT---------CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEE-ECCGGGGG---
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC---------CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEE-ECChhhCC---
Confidence 4678999999999999999988763 445899999997 21 22 357888 99987732
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHHHHHHh
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLEESITR 199 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~ 199 (229)
.+++.||+|++|++.. .+..+......+...++..+.++| ||.+++... +...+.+.+..
T Consensus 282 -----~~~~~fD~Ii~npPyg---~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~---~~~~~~~~~~~ 341 (373)
T 3tm4_A 282 -----QYVDSVDFAISNLPYG---LKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT---EKKAIEEAIAE 341 (373)
T ss_dssp -----GTCSCEEEEEEECCCC---------CCHHHHHHHHHHHHHHHE--EEEEEEEES---CHHHHHHHHHH
T ss_pred -----cccCCcCEEEECCCCC---cccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---CHHHHHHHHHH
Confidence 3457899999998752 211111112233467788888888 555555333 23444455544
No 247
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.92 E-value=9.5e-09 Score=88.80 Aligned_cols=97 Identities=14% Similarity=0.140 Sum_probs=72.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CCCCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
+.+..+|||+|||+|.++..++++. |..+++..|+-++. ..++++++ .+|+.+.
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~---------p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~-~gD~~~~------ 240 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLY---------PGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQ-EGDFFKD------ 240 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHC---------SSCEEEEEECHHHHHHHHHHSCC--CCSEEEE-ESCTTTS------
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhC---------CCceeEeccCHHHHHHHHHhhhhcccCceeee-cCccccC------
Confidence 3556899999999999999999987 67789999974321 13578899 9998762
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+...+|+|++... .++++. +.+..+|+.+.+.|+|||++++..
T Consensus 241 ----~~~~~D~~~~~~v-----lh~~~d----~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 241 ----PLPEADLYILARV-----LHDWAD----GKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp ----CCCCCSEEEEESS-----GGGSCH----HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ----CCCCceEEEeeee-----cccCCH----HHHHHHHHHHHhhCCCCCEEEEEE
Confidence 1235799998443 233332 346678999999999999988754
No 248
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.90 E-value=9.9e-10 Score=88.21 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=78.3
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC---CCCCCeEEecCCCCChhHHHHHHHHhCCCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---PIDGAVVLSKCDFTQPDIQDRLVTILKDDK 136 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~ 136 (229)
++.+|||+|||+|.++..++. . +|+|+++ +. ...++.++ .+|+.+.. ++++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~--------------~-~~vD~s~~~~~~a~~~~~~~~-~~d~~~~~--------~~~~~ 102 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKI--------------K-IGVEPSERMAEIARKRGVFVL-KGTAENLP--------LKDES 102 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTC--------------C-EEEESCHHHHHHHHHTTCEEE-ECBTTBCC--------SCTTC
T ss_pred CCCcEEEeCCCCCHHHHHHHH--------------H-hccCCCHHHHHHHHhcCCEEE-EcccccCC--------CCCCC
Confidence 388999999999999877532 2 8999987 21 11267888 88877632 44678
Q ss_pred ccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC-----------------------CChHHH
Q psy1489 137 LDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG-----------------------RNRPQL 193 (229)
Q Consensus 137 ~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~-----------------------~~~~~~ 193 (229)
||+|++...... . .....++..+.++|+|||.+++..+.. ....++
T Consensus 103 fD~v~~~~~l~~-----~------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (219)
T 1vlm_A 103 FDFALMVTTICF-----V------DDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEEL 171 (219)
T ss_dssp EEEEEEESCGGG-----S------SCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHH
T ss_pred eeEEEEcchHhh-----c------cCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHH
Confidence 999999654311 1 113467888999999999999875432 134667
Q ss_pred HHHHHhh-CCeeEEEc
Q psy1489 194 EESITRF-YSQVKILK 208 (229)
Q Consensus 194 ~~~l~~~-F~~v~~~k 208 (229)
.+.+++. |..+.+..
T Consensus 172 ~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 172 MDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHCCCeEEEEec
Confidence 7777776 76666554
No 249
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.90 E-value=3.4e-09 Score=91.40 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=71.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++.. +..+++++|+..+. .+ .+++++ .+|+.+.
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~---------~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~-~~d~~~~----- 245 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRA---------PHVSATVLEMAGTVDTARSYLKDEGLSDRVDVV-EGDFFEP----- 245 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHC---------TTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEE-ECCTTSC-----
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhC---------CCCEEEEecCHHHHHHHHHHHHhcCCCCceEEE-eCCCCCC-----
Confidence 3567899999999999999999875 56799999982221 12 268888 9998762
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
++. .||+|++.... +..+. ..+..+++.+.++|+|||.+++..+
T Consensus 246 ----~~~-~~D~v~~~~vl-----~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 246 ----LPR-KADAIILSFVL-----LNWPD----HDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp ----CSS-CEEEEEEESCG-----GGSCH----HHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ----CCC-CccEEEEcccc-----cCCCH----HHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 333 49999986542 12221 2245788999999999999987543
No 250
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.88 E-value=4.5e-09 Score=90.41 Aligned_cols=123 Identities=17% Similarity=0.213 Sum_probs=80.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|+++..+++...... +...+++|+|+++ +. .+ .+.+. .+|....
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~----~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~-~~D~l~~------ 196 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKG----DVDVHASGVDVDDLLISLALVGADLQRQ-KMTLL-HQDGLAN------ 196 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTS----SCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEE-ESCTTSC------
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhc----CCCceEEEEECCHHHHHHHHHHHHhCCC-CceEE-ECCCCCc------
Confidence 3578999999999999999998874100 0116899999997 11 12 46777 8887653
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHH----------HHHHHHHHHHHHHHcccCCCEEEEee----cCCCChHHHH
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDL----------ITQLAIAVIRFAVTYSKPGADCLIKI----WDGRNRPQLE 194 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~----------~~~~~~~~l~~~~~~LkpgG~~v~~~----~~~~~~~~~~ 194 (229)
.....||+|++|++... ...+... ........+..+.+.|+|||.+++.+ +.+.....+.
T Consensus 197 ---~~~~~fD~Ii~NPPfg~---~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir 270 (344)
T 2f8l_A 197 ---LLVDPVDVVISDLPVGY---YPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVD 270 (344)
T ss_dssp ---CCCCCEEEEEEECCCSE---ESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHH
T ss_pred ---cccCCccEEEECCCCCC---cCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHH
Confidence 23568999999987421 1100000 00011246788999999999998866 3455566777
Q ss_pred HHHHhh
Q psy1489 195 ESITRF 200 (229)
Q Consensus 195 ~~l~~~ 200 (229)
+.+...
T Consensus 271 ~~l~~~ 276 (344)
T 2f8l_A 271 KFIKKN 276 (344)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 766554
No 251
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.87 E-value=1.6e-09 Score=90.60 Aligned_cols=100 Identities=12% Similarity=0.105 Sum_probs=66.3
Q ss_pred CCCeeEeecCCCCc----hHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-----CC----------------------
Q psy1489 61 PGLKVLDCGAAPGS----WSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-----PI---------------------- 108 (229)
Q Consensus 61 ~g~~VLDlGcGpG~----~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-----~~---------------------- 108 (229)
++.+|+|+|||+|. ++..+++..+.. ....+|+|+|+|+ |. ..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~-----~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~ 179 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMA-----PGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGT 179 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSC-----TTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECC
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccC-----CCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccc
Confidence 35799999999998 566666665300 0035899999996 20 10
Q ss_pred --------------CCCeEEecCCCCChhHHHHHHHHhC-CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHc
Q psy1489 109 --------------DGAVVLSKCDFTQPDIQDRLVTILK-DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTY 173 (229)
Q Consensus 109 --------------~~~~~~~~~D~~~~~~~~~i~~~~~-~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~ 173 (229)
..+.|. +.|+.+.. ++ .+.||+|+|.... ...+. +....++..+.+.
T Consensus 180 ~~~~~~~~v~~~lr~~V~F~-~~dl~~~~--------~~~~~~fDlI~crnvl-----iyf~~----~~~~~vl~~~~~~ 241 (274)
T 1af7_A 180 GPHEGLVRVRQELANYVEFS-SVNLLEKQ--------YNVPGPFDAIFCRNVM-----IYFDK----TTQEDILRRFVPL 241 (274)
T ss_dssp TTSCSEEEECHHHHTTEEEE-ECCTTCSS--------CCCCCCEEEEEECSSG-----GGSCH----HHHHHHHHHHGGG
T ss_pred cCCCCceeechhhcccCeEE-ecccCCCC--------CCcCCCeeEEEECCch-----HhCCH----HHHHHHHHHHHHH
Confidence 135667 78877621 22 4689999994321 11122 3356889999999
Q ss_pred ccCCCEEEEe
Q psy1489 174 SKPGADCLIK 183 (229)
Q Consensus 174 LkpgG~~v~~ 183 (229)
|+|||.|++.
T Consensus 242 L~pgG~L~lg 251 (274)
T 1af7_A 242 LKPDGLLFAG 251 (274)
T ss_dssp EEEEEEEEEC
T ss_pred hCCCcEEEEE
Confidence 9999999874
No 252
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.86 E-value=3.6e-09 Score=91.42 Aligned_cols=96 Identities=10% Similarity=0.153 Sum_probs=71.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC----CCCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI----YPIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~----~~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
+.++.+|||+|||+|.++..++++. |..+++++|+..+ ...+++.++ .+|+.++ ++
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~---------p~~~~~~~D~~~~~~~a~~~~~v~~~-~~d~~~~---------~~- 250 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF---------PHLKCTVFDQPQVVGNLTGNENLNFV-GGDMFKS---------IP- 250 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC---------TTSEEEEEECHHHHSSCCCCSSEEEE-ECCTTTC---------CC-
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC---------CCCeEEEeccHHHHhhcccCCCcEEE-eCccCCC---------CC-
Confidence 3467899999999999999999886 5679999999532 123568888 8998762 33
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccC---CCEEEEee
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKP---GADCLIKI 184 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp---gG~~v~~~ 184 (229)
.||+|++.... +.++. ..+..+|+.+.++|+| ||++++..
T Consensus 251 -~~D~v~~~~vl-----h~~~d----~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 251 -SADAVLLKWVL-----HDWND----EQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp -CCSEEEEESCG-----GGSCH----HHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred -CceEEEEcccc-----cCCCH----HHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 49999996543 22222 2345789999999999 99998754
No 253
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.86 E-value=3.9e-09 Score=91.10 Aligned_cols=128 Identities=19% Similarity=0.181 Sum_probs=79.9
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--------CC------C-----CCCeEEecCCCCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--------YP------I-----DGAVVLSKCDFTQ 121 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--------~~------~-----~~~~~~~~~D~~~ 121 (229)
++.+|||||||.|+.+..++++ +..+|++||+++. .+ + ++++++ .+|..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~----------~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi-~~Da~~ 256 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL----------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVL-IEDCIP 256 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT----------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEE-ESCHHH
T ss_pred CCCEEEEEECChhHHHHHHHHC----------CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEE-ECcHHH
Confidence 5689999999999999988765 2378999999961 01 1 146777 777554
Q ss_pred hhHHHHHHHH-hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChHHHH---H-H
Q psy1489 122 PDIQDRLVTI-LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRPQLE---E-S 196 (229)
Q Consensus 122 ~~~~~~i~~~-~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~~~~---~-~ 196 (229)
.+... -.+++||+|++|.+..+.+.. ..+....+....++..+.++|+|||.+++..-+.. ..++. + .
T Consensus 257 -----~L~~~~~~~~~fDvII~D~~d~P~~~~-p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~-~~e~~~~~~~~ 329 (364)
T 2qfm_A 257 -----VLKRYAKEGREFDYVINDLTAVPISTS-PEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN-LTEALSLYEEQ 329 (364)
T ss_dssp -----HHHHHHHHTCCEEEEEEECCSSCCCCC-----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT-CHHHHHHHHHH
T ss_pred -----HHHhhhccCCCceEEEECCCCcccCcC-chhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcc-hHHHHHHHHHH
Confidence 12221 135789999999752011110 11122223344555667999999999998654332 23333 3 3
Q ss_pred HHhhCCeeEE
Q psy1489 197 ITRFYSQVKI 206 (229)
Q Consensus 197 l~~~F~~v~~ 206 (229)
+++.|..|..
T Consensus 330 l~~~F~~v~~ 339 (364)
T 2qfm_A 330 LGRLYCPVEF 339 (364)
T ss_dssp HTTSSSCEEE
T ss_pred HHHhCCceEE
Confidence 6668988876
No 254
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.80 E-value=1.9e-09 Score=88.40 Aligned_cols=98 Identities=11% Similarity=0.165 Sum_probs=66.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC--------CCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP--------IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~--------~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++..++++. ++|+|+|+++ +.. .++++++ .+|+.+..
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~-----------~~v~~id~~~~~~~~a~~~~~~~~~v~~~-~~D~~~~~------ 88 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS-----------KQVTSIELDSHLFNLSSEKLKLNTRVTLI-HQDILQFQ------ 88 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS-----------SEEEESSSSCSSSSSSSCTTTTCSEEEEC-CSCCTTTT------
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC-----------CeEEEEECCHHHHHHHHHHhccCCceEEE-ECChhhcC------
Confidence 4578899999999999999999873 5999999997 321 1357788 89988732
Q ss_pred HHhC-CCCccEEEeCCCCCCCCCCcccHHHHHHHHH------HHH----HHHHHcccCCCEEEEe
Q psy1489 130 TILK-DDKLDVVLSDMAPNATGMREMDHDLITQLAI------AVI----RFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~-~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~------~~l----~~~~~~LkpgG~~v~~ 183 (229)
++ +++| .|++|.+...+. ........ ..+ +.+.++|+|||.+.+.
T Consensus 89 --~~~~~~f-~vv~n~Py~~~~------~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 89 --FPNKQRY-KIVGNIPYHLST------QIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp --CCCSSEE-EEEEECCSSSCH------HHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred --cccCCCc-EEEEeCCccccH------HHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 23 2578 788887643221 11111111 223 6689999999987653
No 255
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.76 E-value=8.6e-09 Score=86.56 Aligned_cols=66 Identities=21% Similarity=0.311 Sum_probs=51.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+.++.+|||+|||+|.++..+++.. ++|+|+|+++ |. .. ++++++ .+|+.+.
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~-~~D~~~~---- 89 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKA-----------KKVVACELDPRLVAELHKRVQGTPVASKLQVL-VGDVLKT---- 89 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHS-----------SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE-ESCTTTS----
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhC-----------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE-Ecceecc----
Confidence 3578899999999999999999873 5999999996 21 11 367888 9998863
Q ss_pred HHHHHhCCCCccEEEeCCCC
Q psy1489 127 RLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~ 146 (229)
+-..||+|+++.+.
T Consensus 90 ------~~~~fD~vv~nlpy 103 (285)
T 1zq9_A 90 ------DLPFFDTCVANLPY 103 (285)
T ss_dssp ------CCCCCSEEEEECCG
T ss_pred ------cchhhcEEEEecCc
Confidence 22379999998764
No 256
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.76 E-value=1e-08 Score=86.69 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=48.3
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..++++. ++|+|+|+++ + ...++++++ .+|+.+.
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~-----------~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~-~~D~~~~----- 102 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLA-----------KKVITIDIDSRMISEVKKRCLYEGYNNLEVY-EGDAIKT----- 102 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTS-----------SEEEEECSCHHHHHHHHHHHHHTTCCCEEC-----CCSS-----
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcC-----------CEEEEEECCHHHHHHHHHHHHHcCCCceEEE-ECchhhC-----
Confidence 3578899999999999999988752 5999999996 2 123567888 8888772
Q ss_pred HHHHhCCCCccEEEeCCCC
Q psy1489 128 LVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~ 146 (229)
+...||+|++|.+.
T Consensus 103 -----~~~~~D~Vv~n~py 116 (299)
T 2h1r_A 103 -----VFPKFDVCTANIPY 116 (299)
T ss_dssp -----CCCCCSEEEEECCG
T ss_pred -----CcccCCEEEEcCCc
Confidence 23479999998754
No 257
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.69 E-value=1.6e-08 Score=88.29 Aligned_cols=91 Identities=14% Similarity=-0.047 Sum_probs=65.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------C---------------CCCCCeEE
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------Y---------------PIDGAVVL 114 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~---------------~~~~~~~~ 114 (229)
++.+|||+|||+|.++..++.+. +..+|+++|+++- . .+.+++++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~---------~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~ 117 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALET---------PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVIN 117 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHS---------SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEE
T ss_pred CCCEEEECCCchhHHHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEE
Confidence 57899999999999999999886 3468999999961 1 22336677
Q ss_pred ecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 115 SKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 115 ~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
++|+.+. + ... .+.||+|+.|+.. . ....+..+.+.|++||.+++.
T Consensus 118 -~~Da~~~-----~-~~~-~~~fD~I~lDP~~----~-----------~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 118 -HDDANRL-----M-AER-HRYFHFIDLDPFG----S-----------PMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp -ESCHHHH-----H-HHS-TTCEEEEEECCSS----C-----------CHHHHHHHHHHEEEEEEEEEE
T ss_pred -cCcHHHH-----H-Hhc-cCCCCEEEeCCCC----C-----------HHHHHHHHHHhcCCCCEEEEE
Confidence 7775542 1 112 4579999998632 1 124667788999999988764
No 258
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.68 E-value=6.4e-09 Score=91.10 Aligned_cols=95 Identities=16% Similarity=-0.040 Sum_probs=67.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CCCCC--CeEEecCCCCChhHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YPIDG--AVVLSKCDFTQPDIQD 126 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~~~~--~~~~~~~D~~~~~~~~ 126 (229)
++|.+|||++||+|.++..++.+.+ +..+|+++|+++. ..+.+ ++++ .+|+.+.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~--------ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~-~~Da~~~---- 117 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETS--------CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIH-GMEANFF---- 117 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCS--------CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE-CSCHHHH----
T ss_pred CCCCEEEECCCcccHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEE-eCCHHHH----
Confidence 4689999999999999999998753 2368999999961 13344 7777 7875441
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+...+ .+.||+|+.|+. +. ....+..+.+.|+|||.+++..
T Consensus 118 -l~~~~-~~~fD~V~lDP~----g~-----------~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 118 -LRKEW-GFGFDYVDLDPF----GT-----------PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp -HHSCC-SSCEEEEEECCS----SC-----------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred -HHHhh-CCCCcEEEECCC----cC-----------HHHHHHHHHHHhCCCCEEEEEe
Confidence 21012 457999999872 11 1235677888999999887754
No 259
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.66 E-value=1.7e-08 Score=92.49 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=62.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||.|.++..+|++ | +.|+|||+++ +. ..-++.+. ++++.+ +
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-g----------a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~-~~~~~~------~ 126 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-G----------ATIVGIDFQQENINVCRALAEENPDFAAEFR-VGRIEE------V 126 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHTSTTSEEEEE-ECCHHH------H
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-C----------CEEEEECCCHHHHHHHHHHHHhcCCCceEEE-ECCHHH------H
Confidence 45679999999999999999975 3 6999999997 11 11246666 676544 3
Q ss_pred HHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 129 VTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.....+++||+|+|-.. .+|......+ ..+....+.|+++|...+-.
T Consensus 127 ~~~~~~~~fD~v~~~e~--------~ehv~~~~~~-~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 127 IAALEEGEFDLAIGLSV--------FHHIVHLHGI-DEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHCCTTSCSEEEEESC--------HHHHHHHHCH-HHHHHHHHHHHHHSSEEEEE
T ss_pred hhhccCCCccEEEECcc--------hhcCCCHHHH-HHHHHHHHHhccccceeeEE
Confidence 33355778999999332 3333222222 22333556677777654433
No 260
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.65 E-value=5.9e-08 Score=85.96 Aligned_cols=89 Identities=20% Similarity=0.203 Sum_probs=62.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------CCCCCeEEecCCCCChhHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
+.++.+|||+|||+|.++..+++.. .+|+|+|+++ +. .+. +.++ .+|+.+.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~-----------~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~-~~d~~~~----- 349 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG-----------FNVKGFDSNEFAIEMARRNVEINNVD-AEFE-VASDREV----- 349 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT-----------CEEEEEESCHHHHHHHHHHHHHHTCC-EEEE-ECCTTTC-----
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC-----------CEEEEEECCHHHHHHHHHHHHHcCCc-EEEE-ECChHHc-----
Confidence 4578899999999999999998752 5999999996 21 233 7888 9998772
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+ ...||+|++|++- .|. +. .++. ..+.|+|+|.+++..
T Consensus 350 ----~-~~~fD~Vv~dPPr--~g~---~~--------~~~~-~l~~l~p~givyvsc 387 (425)
T 2jjq_A 350 ----S-VKGFDTVIVDPPR--AGL---HP--------RLVK-RLNREKPGVIVYVSC 387 (425)
T ss_dssp ----C-CTTCSEEEECCCT--TCS---CH--------HHHH-HHHHHCCSEEEEEES
T ss_pred ----C-ccCCCEEEEcCCc--cch---HH--------HHHH-HHHhcCCCcEEEEEC
Confidence 2 2279999998752 121 11 1222 223489999988753
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.60 E-value=4.6e-07 Score=80.55 Aligned_cols=129 Identities=12% Similarity=0.190 Sum_probs=76.2
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCC----CCCcEEEEEeCCC-C----------CCCC--CCeEEecCCCCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSK----QPKGLVLSVDKLP-I----------YPID--GAVVLSKCDFTQ 121 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~----~~~~~v~gvD~~~-~----------~~~~--~~~~~~~~D~~~ 121 (229)
..++.+|||.|||+|++...+++++......++ .+..+++|+|+++ + ..+. .+.+. ++|...
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~-~gD~l~ 247 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIV-CEDSLE 247 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEE-ECCTTT
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEe-eCCCCC
Confidence 356789999999999999998887521000000 0124799999996 1 1222 45677 888765
Q ss_pred hhHHHHHHHHhCCCCccEEEeCCCCCCCCCCccc----HHH--HHHHHHHHHHHHHHcccCCCEEEEee-----cCCCCh
Q psy1489 122 PDIQDRLVTILKDDKLDVVLSDMAPNATGMREMD----HDL--ITQLAIAVIRFAVTYSKPGADCLIKI-----WDGRNR 190 (229)
Q Consensus 122 ~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d----~~~--~~~~~~~~l~~~~~~LkpgG~~v~~~-----~~~~~~ 190 (229)
.. ....||+|++|++.......... .+. ........+..+.++|+|||++++.+ +.+...
T Consensus 248 ~~---------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~ 318 (445)
T 2okc_A 248 KE---------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAG 318 (445)
T ss_dssp SC---------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHH
T ss_pred Cc---------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHH
Confidence 31 12489999999875322111000 000 00011256777889999999998765 233333
Q ss_pred HHHHHHH
Q psy1489 191 PQLEESI 197 (229)
Q Consensus 191 ~~~~~~l 197 (229)
..+.+.+
T Consensus 319 ~~iR~~L 325 (445)
T 2okc_A 319 ETIRKRL 325 (445)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4566544
No 262
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.60 E-value=7.9e-08 Score=79.33 Aligned_cols=104 Identities=11% Similarity=-0.029 Sum_probs=68.5
Q ss_pred hhHhhhhhcC----ccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC-------C--CCCeE
Q psy1489 48 KLLEIDSKIK----FLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP-------I--DGAVV 113 (229)
Q Consensus 48 kl~~i~~~~~----~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~-------~--~~~~~ 113 (229)
.|..++..|. .+.+..+|||||||+|-++..++... +..+|+|+|+++ |.. . ....+
T Consensus 115 RLp~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~---------p~a~y~a~DId~~~le~a~~~l~~~g~~~~~ 185 (281)
T 3lcv_B 115 RLPHLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLP---------AETVYIASDIDARLVGFVDEALTRLNVPHRT 185 (281)
T ss_dssp HGGGHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCC---------TTCEEEEEESBHHHHHHHHHHHHHTTCCEEE
T ss_pred HhHhHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhC---------CCCEEEEEeCCHHHHHHHHHHHHhcCCCceE
Confidence 3444444433 34556899999999999998877653 678999999997 210 1 12345
Q ss_pred EecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHH--HHHHHHHHHcccCCCEEEE
Q psy1489 114 LSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLA--IAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 114 ~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~--~~~l~~~~~~LkpgG~~v~ 182 (229)
. ..|.... .+.+.+|+|++.... ..++.. ...+ ...+.|+++|.||-
T Consensus 186 ~-v~D~~~~---------~p~~~~DvaL~lkti-----------~~Le~q~kg~g~-~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 186 N-VADLLED---------RLDEPADVTLLLKTL-----------PCLETQQRGSGW-EVIDIVNSPNIVVT 234 (281)
T ss_dssp E-ECCTTTS---------CCCSCCSEEEETTCH-----------HHHHHHSTTHHH-HHHHHSSCSEEEEE
T ss_pred E-Eeeeccc---------CCCCCcchHHHHHHH-----------HHhhhhhhHHHH-HHHHHhCCCCEEEe
Confidence 5 6776542 457789999995532 122211 1334 78889999998875
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.58 E-value=6.8e-08 Score=83.93 Aligned_cols=90 Identities=11% Similarity=0.093 Sum_probs=62.4
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHHHHH
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
+.+|||+|||+|.++..+++.. .+|+|+|+++ + ..+.+++++ .+|+.+. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~-----------~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~-~~d~~~~-----~~~ 276 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF-----------DRVLATEIAKPSVAAAQYNIAANHIDNVQII-RMAAEEF-----TQA 276 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS-----------SEEEEECCCHHHHHHHHHHHHHTTCCSEEEE-CCCSHHH-----HHH
T ss_pred CCEEEEccCCCCHHHHHHHhcC-----------CEEEEEECCHHHHHHHHHHHHHcCCCceEEE-ECCHHHH-----HHH
Confidence 6789999999999999988632 5999999997 2 134578888 8887652 111
Q ss_pred HhCC--------------CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 131 ILKD--------------DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 131 ~~~~--------------~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
+.+ ..||+|+.|++-. |. ...+.+.|+++|.++.....
T Consensus 277 -~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~--g~---------------~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 277 -MNGVREFNRLQGIDLKSYQCETIFVDPPRS--GL---------------DSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp -HSSCCCCTTGGGSCGGGCCEEEEEECCCTT--CC---------------CHHHHHHHTTSSEEEEEESC
T ss_pred -HhhccccccccccccccCCCCEEEECcCcc--cc---------------HHHHHHHHhCCCEEEEEECC
Confidence 222 3799999987531 21 12355667789988765443
No 264
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.57 E-value=9.8e-08 Score=78.24 Aligned_cols=67 Identities=15% Similarity=0.226 Sum_probs=49.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C--------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I--------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~--------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++..++++. ++|+|+|+++ | ...++++++ .+|+.+.+
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~-~~D~~~~~------ 89 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRC-----------NFVTAIEIDHKLCKTTENKLVDHDNFQVL-NKDILQFK------ 89 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-----------SEEEEECSCHHHHHHHHHHTTTCCSEEEE-CCCGGGCC------
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcC-----------CeEEEEECCHHHHHHHHHhhccCCCeEEE-EChHHhCC------
Confidence 3578899999999999999999873 5999999996 2 123578888 99887632
Q ss_pred HHhCC-CCccEEEeCCCC
Q psy1489 130 TILKD-DKLDVVLSDMAP 146 (229)
Q Consensus 130 ~~~~~-~~~D~V~sd~~~ 146 (229)
+++ ..| .|++|.+.
T Consensus 90 --~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 90 --FPKNQSY-KIFGNIPY 104 (244)
T ss_dssp --CCSSCCC-EEEEECCG
T ss_pred --cccCCCe-EEEEeCCc
Confidence 222 345 67887653
No 265
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.57 E-value=5.4e-08 Score=82.11 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=54.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++++|||+|||+|.++..++++. .+|+|||+++ |. ..++++++ .+|+.+.+
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~-----------~~V~aVEid~~li~~a~~~~~~~~~v~vi-~gD~l~~~------ 109 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA-----------KKVYVIEIDKSLEPYANKLKELYNNIEII-WGDALKVD------ 109 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS-----------SEEEEEESCGGGHHHHHHHHHHCSSEEEE-ESCTTTSC------
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC-----------CEEEEEECCHHHHHHHHHHhccCCCeEEE-ECchhhCC------
Confidence 4578999999999999999999873 5999999997 31 13578899 99998743
Q ss_pred HHhCCCCccEEEeCCCC
Q psy1489 130 TILKDDKLDVVLSDMAP 146 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~ 146 (229)
+++..||.|+++++.
T Consensus 110 --~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 110 --LNKLDFNKVVANLPY 124 (295)
T ss_dssp --GGGSCCSEEEEECCG
T ss_pred --cccCCccEEEEeCcc
Confidence 334579999998764
No 266
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.52 E-value=7.3e-08 Score=81.58 Aligned_cols=74 Identities=23% Similarity=0.394 Sum_probs=54.1
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CC-CCCeEEecCCCCChhHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PI-DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~-~~~~~~~~~D~~~~~~~~~i 128 (229)
++++.+|||+|||+|+++..++++. +.++|+|+|+++ +. .. .++.++ ++|+.+... .+
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~---------~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v-~~d~~~l~~--~l 91 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHC---------PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLF-KVSYREADF--LL 91 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEE-ECCGGGHHH--HH
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-ECCHHHHHH--HH
Confidence 4578999999999999999999886 457999999997 21 11 468888 999876321 11
Q ss_pred HHHhCCCCccEEEeCCC
Q psy1489 129 VTILKDDKLDVVLSDMA 145 (229)
Q Consensus 129 ~~~~~~~~~D~V~sd~~ 145 (229)
.. .....||.|++|.+
T Consensus 92 ~~-~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 92 KT-LGIEKVDGILMDLG 107 (301)
T ss_dssp HH-TTCSCEEEEEEECS
T ss_pred Hh-cCCCCCCEEEEcCc
Confidence 11 22257999998863
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.52 E-value=6.6e-07 Score=81.53 Aligned_cols=134 Identities=13% Similarity=0.145 Sum_probs=79.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCC---------CCcEEEEEeCCC-C----------CCCCC-----CeE
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQ---------PKGLVLSVDKLP-I----------YPIDG-----AVV 113 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~---------~~~~v~gvD~~~-~----------~~~~~-----~~~ 113 (229)
..++.+|+|.|||+|++...+++++......... ....++|+|+++ + ..+.. +.+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I 246 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAI 246 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSE
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCe
Confidence 3567899999999999999988876411100000 013799999996 1 12333 567
Q ss_pred EecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCc-ccHH--HHHHHHHHHHHHHHHcccCCCEEEEeecC----
Q psy1489 114 LSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMRE-MDHD--LITQLAIAVIRFAVTYSKPGADCLIKIWD---- 186 (229)
Q Consensus 114 ~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~-~d~~--~~~~~~~~~l~~~~~~LkpgG~~v~~~~~---- 186 (229)
. ++|..... ......||+|++|++........ ...+ .....-...+..+.++|+|||++++.+..
T Consensus 247 ~-~gDtL~~~-------~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~ 318 (541)
T 2ar0_A 247 R-LGNTLGSD-------GENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLF 318 (541)
T ss_dssp E-ESCTTSHH-------HHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHH
T ss_pred E-eCCCcccc-------cccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCccee
Confidence 7 88877632 12346899999998753321100 0000 00000124677789999999998876532
Q ss_pred -CCChHHHHHHHHhh
Q psy1489 187 -GRNRPQLEESITRF 200 (229)
Q Consensus 187 -~~~~~~~~~~l~~~ 200 (229)
+.....+++.|...
T Consensus 319 ~~~~~~~iR~~L~~~ 333 (541)
T 2ar0_A 319 EGGKGTDIRRDLMDK 333 (541)
T ss_dssp CCTHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHhhc
Confidence 22234566555443
No 268
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.50 E-value=4.7e-07 Score=80.26 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=52.9
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------CCCCCCeEEecCCCCChhHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------YPIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.++.+|||+|||+|.++..+++.. .+|+|+|+++ + ..+.++.++ .+|+.+.-
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~-----------~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~-~~d~~~~l----- 347 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQA-----------ASVVGVEGVPALVEKGQQNARLNGLQNVTFY-HENLEEDV----- 347 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTS-----------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEE-ECCTTSCC-----
T ss_pred CCCCEEEECCCCCCHHHHHHHhhC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCceEEE-ECCHHHHh-----
Confidence 467899999999999999998752 6999999996 2 134578899 99987621
Q ss_pred HH-HhCCCCccEEEeCCCC
Q psy1489 129 VT-ILKDDKLDVVLSDMAP 146 (229)
Q Consensus 129 ~~-~~~~~~~D~V~sd~~~ 146 (229)
.. .+.++.||+|++|++-
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr 366 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPAR 366 (433)
T ss_dssp SSSGGGTTCCSEEEECCCT
T ss_pred hhhhhhcCCCCEEEECCCC
Confidence 00 1335689999998753
No 269
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.47 E-value=9.6e-08 Score=79.08 Aligned_cols=70 Identities=20% Similarity=0.068 Sum_probs=50.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-------CC-----------CC-CCCeEEecCCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-------IY-----------PI-DGAVVLSKCDF 119 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-------~~-----------~~-~~~~~~~~~D~ 119 (229)
..++.+|||+|||+|.++..++.. + ++|+|+|+++ -. .+ .+++++ ++|+
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~-g----------~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~-~~d~ 148 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL-G----------LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLH-FGNA 148 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT-T----------CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEE-ESCH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh-C----------CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEE-ECCH
Confidence 346789999999999999999885 3 5899999998 10 11 237888 8886
Q ss_pred CChhHHHHHHHHhCC--CCccEEEeCCCC
Q psy1489 120 TQPDIQDRLVTILKD--DKLDVVLSDMAP 146 (229)
Q Consensus 120 ~~~~~~~~i~~~~~~--~~~D~V~sd~~~ 146 (229)
.+. + ..+++ +.||+|++|++.
T Consensus 149 ~~~-----l-~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 149 AEQ-----M-PALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHH-----H-HHHHHHHCCCSEEEECCCC
T ss_pred HHH-----H-HhhhccCCCccEEEECCCC
Confidence 542 1 11223 689999999764
No 270
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.45 E-value=6.9e-07 Score=78.28 Aligned_cols=108 Identities=13% Similarity=0.043 Sum_probs=65.4
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccC-C----------------------------CCCCCCcEEEEEeCCC-C----
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHG-Y----------------------------DSKQPKGLVLSVDKLP-I---- 105 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~-~----------------------------~~~~~~~~v~gvD~~~-~---- 105 (229)
.++..|||.+||+|.+++.++....... + .......+|+|+|+++ |
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 5678999999999999999887642000 0 0001225799999997 2
Q ss_pred ------CCCC-CCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHccc--C
Q psy1489 106 ------YPID-GAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSK--P 176 (229)
Q Consensus 106 ------~~~~-~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lk--p 176 (229)
..+. .+++. ++|+.+. .....||+|++|++. |.+..+. ...........+.|+ +
T Consensus 280 r~Na~~~gl~~~I~~~-~~D~~~~---------~~~~~fD~Iv~NPPY---g~rl~~~----~~l~~ly~~lg~~lk~~~ 342 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFR-QLQVADF---------QTEDEYGVVVANPPY---GERLEDE----EAVRQLYREMGIVYKRMP 342 (393)
T ss_dssp HHHHHHTTCTTCSEEE-ECCGGGC---------CCCCCSCEEEECCCC---CCSHHHH----HHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHcCCCCceEEE-ECChHhC---------CCCCCCCEEEECCCC---ccccCCc----hhHHHHHHHHHHHHhcCC
Confidence 1233 47888 8988763 124589999999865 3332221 112223333333443 4
Q ss_pred CCEEEEee
Q psy1489 177 GADCLIKI 184 (229)
Q Consensus 177 gG~~v~~~ 184 (229)
||.+.+-+
T Consensus 343 g~~~~iit 350 (393)
T 3k0b_A 343 TWSVYVLT 350 (393)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEEE
Confidence 88887643
No 271
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.44 E-value=1e-07 Score=78.75 Aligned_cols=70 Identities=13% Similarity=0.170 Sum_probs=52.0
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC--------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY--------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~--------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++..++++. ++|+|+|+++ |. ..++++++ ++|+.+.+. .
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~-----------~~V~avEid~~~~~~~~~~~~~~~~v~~i-~~D~~~~~~----~ 90 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTEC-----------DNLALVEIDRDLVAFLQKKYNQQKNITIY-QNDALQFDF----S 90 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTS-----------SEEEEEECCHHHHHHHHHHHTTCTTEEEE-ESCTTTCCG----G
T ss_pred CCCcCEEEEEcccccHHHHHHHHhC-----------CEEEEEECCHHHHHHHHHHHhhCCCcEEE-EcchHhCCH----H
Confidence 4578999999999999999998753 5999999997 21 23578899 999987542 1
Q ss_pred HHhCCCCccEEEeCCC
Q psy1489 130 TILKDDKLDVVLSDMA 145 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~ 145 (229)
....+..|| |++|.+
T Consensus 91 ~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 91 SVKTDKPLR-VVGNLP 105 (255)
T ss_dssp GSCCSSCEE-EEEECC
T ss_pred HhccCCCeE-EEecCC
Confidence 112245688 888764
No 272
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.41 E-value=5.3e-07 Score=78.82 Aligned_cols=108 Identities=13% Similarity=0.004 Sum_probs=65.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccC-C----------------------------CCCCCCcEEEEEeCCC-CC---
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHG-Y----------------------------DSKQPKGLVLSVDKLP-IY--- 106 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~-~----------------------------~~~~~~~~v~gvD~~~-~~--- 106 (229)
.++.+|||.|||+|.+++.++....... + ....+..+|+|+|+++ +.
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 4678999999999999999887642000 0 0001225799999997 21
Q ss_pred -------CCC-CCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccC--
Q psy1489 107 -------PID-GAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKP-- 176 (229)
Q Consensus 107 -------~~~-~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp-- 176 (229)
.+. .+++. ++|+.+. ..+..||+|++|++. |.+..+. ......+....+.|++
T Consensus 274 r~Na~~~gl~~~i~~~-~~D~~~l---------~~~~~~D~Iv~NPPy---g~rl~~~----~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFN-VGDATQF---------KSEDEFGFIITNPPY---GERLEDK----DSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp HHHHHHHTCGGGEEEE-ECCGGGC---------CCSCBSCEEEECCCC---CCSHHHH----HHHHHHHHHHHHHHHTSB
T ss_pred HHHHHHcCCCCceEEE-ECChhhc---------CcCCCCcEEEECCCC---cCccCCH----HHHHHHHHHHHHHHhhCC
Confidence 122 46788 8887762 224589999999875 3222111 2223344444445544
Q ss_pred CCEEEEee
Q psy1489 177 GADCLIKI 184 (229)
Q Consensus 177 gG~~v~~~ 184 (229)
||.+.+-+
T Consensus 337 g~~~~iit 344 (385)
T 3ldu_A 337 NWSYYLIT 344 (385)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 88877643
No 273
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.37 E-value=2.4e-06 Score=80.42 Aligned_cols=135 Identities=8% Similarity=-0.009 Sum_probs=78.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC----C------C-------CCCCeEEecCCCCCh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI----Y------P-------IDGAVVLSKCDFTQP 122 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~----~------~-------~~~~~~~~~~D~~~~ 122 (229)
+++.+|||.|||+|++...++++.+. ....+++|+|+++. . . +....+. ..|+.+.
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~e------i~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~-~dD~L~~ 392 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNN------VMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTIT-GEDVCSL 392 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTT------CCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEE-CCCGGGC
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcc------cCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEE-ecchhcc
Confidence 45789999999999999998876520 01257999999972 1 0 0112333 4444331
Q ss_pred hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHH------------------HHHHHHHHHHHHcccCCCEEEEee
Q psy1489 123 DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLIT------------------QLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 123 ~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~------------------~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
. ......||+|++|++.........+..... .+....+..+.++|+|||++++.+
T Consensus 393 ~-------~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 393 N-------PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp C-------GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred c-------ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 1 122468999999987632111111100000 012346788999999999998865
Q ss_pred cCC------CChHHHHHHHHhhCCeeEEEc
Q psy1489 185 WDG------RNRPQLEESITRFYSQVKILK 208 (229)
Q Consensus 185 ~~~------~~~~~~~~~l~~~F~~v~~~k 208 (229)
..+ .....+++.|...+.-..++.
T Consensus 466 P~s~Lf~sg~~~kkLRk~LLe~~~I~aIId 495 (878)
T 3s1s_A 466 PKQYLTAQGNESKAFREFLVGNFGLEHIFL 495 (878)
T ss_dssp ETHHHHCCSHHHHHHHHHHTTTTCEEEEEE
T ss_pred ChHHhccCChHHHHHHHHHHhCCCeEEEEE
Confidence 332 124566666655444334443
No 274
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.33 E-value=2.9e-06 Score=74.06 Aligned_cols=108 Identities=10% Similarity=-0.019 Sum_probs=65.7
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccC-C----------------------------CCCCCCcEEEEEeCCC-C----
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHG-Y----------------------------DSKQPKGLVLSVDKLP-I---- 105 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~-~----------------------------~~~~~~~~v~gvD~~~-~---- 105 (229)
.++..|||.+||+|.+.+.++....... + .......+|+|+|+++ |
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 5678999999999999999887642100 0 0001225799999997 2
Q ss_pred ------CCCC-CCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHccc--C
Q psy1489 106 ------YPID-GAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSK--P 176 (229)
Q Consensus 106 ------~~~~-~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lk--p 176 (229)
..+. .+++. ++|+.+. .....||+|++|++. |.+..+.... ...+..+.+.|| +
T Consensus 273 r~Na~~~gl~~~I~~~-~~D~~~l---------~~~~~fD~Iv~NPPY---G~rl~~~~~l----~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLK-QMRLQDF---------KTNKINGVLISNPPY---GERLLDDKAV----DILYNEMGETFAPLK 335 (384)
T ss_dssp HHHHHHTTCTTTEEEE-ECCGGGC---------CCCCCSCEEEECCCC---TTTTSCHHHH----HHHHHHHHHHHTTCT
T ss_pred HHHHHHcCCCCceEEE-ECChHHC---------CccCCcCEEEECCch---hhccCCHHHH----HHHHHHHHHHHhhCC
Confidence 1233 37788 8988763 123589999999875 3332222222 223333344444 4
Q ss_pred CCEEEEee
Q psy1489 177 GADCLIKI 184 (229)
Q Consensus 177 gG~~v~~~ 184 (229)
||.+.+-+
T Consensus 336 g~~~~iit 343 (384)
T 3ldg_A 336 TWSQFILT 343 (384)
T ss_dssp TSEEEEEE
T ss_pred CcEEEEEE
Confidence 88887644
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.32 E-value=1e-07 Score=87.91 Aligned_cols=93 Identities=19% Similarity=0.214 Sum_probs=62.7
Q ss_pred CCeeEeecCCCCchHH---HHHHHHhccCCCCCCCCcEEEEEeCCCCCC----------C-CCCeEEecCCCCChhHHHH
Q psy1489 62 GLKVLDCGAAPGSWSQ---VAVKLVNSHGYDSKQPKGLVLSVDKLPIYP----------I-DGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~---~la~~~~~~~~~~~~~~~~v~gvD~~~~~~----------~-~~~~~~~~~D~~~~~~~~~ 127 (229)
+..|||+|||+|-++. .++++.+ ...+|+|||-++|.. . ..++++ ++|+++..
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~--------~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI-~gd~eev~---- 424 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQAD--------RRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVV-SSDMREWV---- 424 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTT--------CEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEE-ESCTTTCC----
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcC--------CCcEEEEEECCHHHHHHHHHHHhccCCCeEEEE-eCcceecc----
Confidence 4579999999998844 4444432 223799999998531 1 248899 99998842
Q ss_pred HHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEE
Q psy1489 128 LVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCL 181 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v 181 (229)
+ ++++|+|+|-.. |.- ..... ...++....++|||||.++
T Consensus 425 ----L-PEKVDIIVSEwM----G~f-Ll~E~----mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 425 ----A-PEKADIIVSELL----GSF-ADNEL----SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ----C-SSCEEEEECCCC----BTT-BGGGC----HHHHHHHHGGGEEEEEEEE
T ss_pred ----C-CcccCEEEEEcC----ccc-ccccC----CHHHHHHHHHhcCCCcEEc
Confidence 3 468999999543 221 11212 2246677889999999875
No 276
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=98.32 E-value=1.5e-06 Score=70.98 Aligned_cols=88 Identities=19% Similarity=0.272 Sum_probs=65.3
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHH----HHHHHHHHHHHcccCCCEEEEeecCCCC--hHHHHHHHHhhCCeeEEEc
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQ----LAIAVIRFAVTYSKPGADCLIKIWDGRN--RPQLEESITRFYSQVKILK 208 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~----~~~~~l~~~~~~LkpgG~~v~~~~~~~~--~~~~~~~l~~~F~~v~~~k 208 (229)
+.||+|+.|+.-.... .|+...+ ....+-..+.+.|+|||+++++.+...+ .+.++..+-+.|..+.++|
T Consensus 210 grYDlVfvNv~TpyR~----HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~ 285 (324)
T 3trk_A 210 GRYDLVVINIHTPFRI----HHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALK 285 (324)
T ss_dssp CCEEEEEEECCCCCCS----SHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC
T ss_pred CceeEEEEecCCcccc----chHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeec
Confidence 6899999998632222 1333322 2234556788999999999999876543 6778888888999999999
Q ss_pred CCCCCCCCceEEEEeccCC
Q psy1489 209 PPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 209 p~~sr~~s~E~Y~v~~~~~ 227 (229)
|...- ++.|+++|+.+|-
T Consensus 286 P~cv~-snTEv~~vF~~~D 303 (324)
T 3trk_A 286 PPCVT-SNTEMFFLFSNFD 303 (324)
T ss_dssp CTTCC-BTTCEEEEEEEEC
T ss_pred Ccccc-ccceEEEEEEecc
Confidence 95544 4999999999874
No 277
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.31 E-value=4.5e-07 Score=75.57 Aligned_cols=68 Identities=10% Similarity=0.089 Sum_probs=51.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC-------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY-------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~-------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
+.++ +|||+|||+|.++..++++. ++|+|+|+++ |. .-.+++++ ++|+.+.+
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~-----------~~V~avEid~~~~~~l~~~~~~~~v~vi-~~D~l~~~------- 104 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAG-----------AEVTAIEKDLRLRPVLEETLSGLPVRLV-FQDALLYP------- 104 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTT-----------CCEEEEESCGGGHHHHHHHTTTSSEEEE-ESCGGGSC-------
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcC-----------CEEEEEECCHHHHHHHHHhcCCCCEEEE-ECChhhCC-------
Confidence 4567 99999999999999999863 5899999997 31 12468888 99987643
Q ss_pred HhCC-CCccEEEeCCCCC
Q psy1489 131 ILKD-DKLDVVLSDMAPN 147 (229)
Q Consensus 131 ~~~~-~~~D~V~sd~~~~ 147 (229)
+++ ..+|.|++|.+.+
T Consensus 105 -~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 105 -WEEVPQGSLLVANLPYH 121 (271)
T ss_dssp -GGGSCTTEEEEEEECSS
T ss_pred -hhhccCccEEEecCccc
Confidence 111 2689999988653
No 278
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.30 E-value=1.4e-07 Score=82.90 Aligned_cols=117 Identities=16% Similarity=0.037 Sum_probs=70.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C----------C--CCCCCeEEecCCCCChhHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I----------Y--PIDGAVVLSKCDFTQPDIQ 125 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~----------~--~~~~~~~~~~~D~~~~~~~ 125 (229)
+.+|.+|||||||+|..+..+++. ..+|+|||+++ + . .+.+++++ ++|+.+.
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~-----------g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i-~~Da~~~--- 155 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSK-----------ASQGIYIERNDETAVAARHNIPLLLNEGKDVNIL-TGDFKEY--- 155 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTT-----------CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEE-ESCGGGS---
T ss_pred cCCCCEEEEeCCCchHHHHHHHhc-----------CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEE-ECcHHHh---
Confidence 445899999999999999988764 25999999997 2 1 23457888 9998762
Q ss_pred HHHHHHhCCCCccEEEeCCCCCCC-CCCcccHHHHHHHHHHHHHHHHH-cccCCCEEEEeecCCCChHHHHHHH
Q psy1489 126 DRLVTILKDDKLDVVLSDMAPNAT-GMREMDHDLITQLAIAVIRFAVT-YSKPGADCLIKIWDGRNRPQLEESI 197 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~~~~~-g~~~~d~~~~~~~~~~~l~~~~~-~LkpgG~~v~~~~~~~~~~~~~~~l 197 (229)
+.. +.+..||+|++|++-... +.+..+. +.+.--+....+ ++..+..+++|.-.+-+....+..+
T Consensus 156 --L~~-~~~~~fDvV~lDPPrr~~~~grv~~l----ed~~P~l~~~~~~l~~~~~~~~vK~sP~ld~~~~~~~l 222 (410)
T 3ll7_A 156 --LPL-IKTFHPDYIYVDPARRSGADKRVYAI----ADCEPDLIPLATELLPFCSSILAKLSPMIDLWDTLQSL 222 (410)
T ss_dssp --HHH-HHHHCCSEEEECCEEC-----CCCCG----GGEESCHHHHHHHHGGGSSEEEEEECTTSCHHHHHHHC
T ss_pred --hhh-ccCCCceEEEECCCCcCCCCceEEeh----hhcCCCHHHHHHHHHhhCCcEEEEcCCCCChHHHHhhC
Confidence 111 123479999999864221 1111111 001112223333 3345567888886666655444443
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.28 E-value=1.7e-07 Score=86.76 Aligned_cols=107 Identities=15% Similarity=0.141 Sum_probs=63.4
Q ss_pred CCeeEeecCCCCchHHHHHHH---Hh-ccCCCCCCCCcEEEEEeCCCCC----------CC-CCCeEEecCCCCChhHHH
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKL---VN-SHGYDSKQPKGLVLSVDKLPIY----------PI-DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~---~~-~~~~~~~~~~~~v~gvD~~~~~----------~~-~~~~~~~~~D~~~~~~~~ 126 (229)
+..|||+|||+|-++..++.. .+ ...+.....+.+|+|||.+++. .. ..++++ ++|+++.....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI-~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTII-ESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEE-ESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEE-eCchhhccccc
Confidence 457999999999997543221 11 0000000012499999999731 12 348999 99998854210
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEE
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCL 181 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v 181 (229)
..-..+++|+|+|-.. |.- .+. ++....|..+.++|||||.++
T Consensus 489 ---~~~~~ekVDIIVSElm----Gsf-l~n----EL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 ---KDRGFEQPDIIVSELL----GSF-GDN----ELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp ---HHTTCCCCSEEEECCC----BTT-BGG----GSHHHHHHTTGGGSCTTCEEE
T ss_pred ---ccCCCCcccEEEEecc----ccc-cch----hccHHHHHHHHHhCCCCcEEE
Confidence 0112578999999553 211 112 223345666689999999876
No 280
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.25 E-value=4.1e-07 Score=75.25 Aligned_cols=69 Identities=16% Similarity=0.155 Sum_probs=49.5
Q ss_pred cCCC--CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CC-------------C-CCCeEEec
Q psy1489 59 LRPG--LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YP-------------I-DGAVVLSK 116 (229)
Q Consensus 59 ~~~g--~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~-------------~-~~~~~~~~ 116 (229)
++++ .+|||+|||+|..+..++.+ + ++|+++|+++. .. + .+++++ .
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~-g----------~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~-~ 151 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV-G----------CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI-H 151 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH-T----------CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE-E
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc-C----------CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE-E
Confidence 3566 89999999999999999987 3 58999999971 00 1 346677 7
Q ss_pred CCCCChhHHHHHHHHhCCCCccEEEeCCCC
Q psy1489 117 CDFTQPDIQDRLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 117 ~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~ 146 (229)
+|..+ +...++ ..||+|++|++.
T Consensus 152 ~D~~~------~L~~~~-~~fDvV~lDP~y 174 (258)
T 2oyr_A 152 ASSLT------ALTDIT-PRPQVVYLDPMF 174 (258)
T ss_dssp SCHHH------HSTTCS-SCCSEEEECCCC
T ss_pred CCHHH------HHHhCc-ccCCEEEEcCCC
Confidence 77443 111122 369999999765
No 281
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.22 E-value=4.5e-06 Score=62.70 Aligned_cols=92 Identities=24% Similarity=0.308 Sum_probs=60.6
Q ss_pred CCCCeeEeecCCCC-chHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCcc
Q psy1489 60 RPGLKVLDCGAAPG-SWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLD 138 (229)
Q Consensus 60 ~~g~~VLDlGcGpG-~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D 138 (229)
.++.+|||+|||+| ..+.+|++..+ ..|+++|+++. .++ ++ +.|++++... .. +.||
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g----------~~V~atDInp~-Av~---~v-~dDiF~P~~~-----~Y--~~~D 91 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK----------VDLVLTDIKPS-HGG---IV-RDDITSPRME-----IY--RGAA 91 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC----------CEEEEECSSCS-STT---EE-CCCSSSCCHH-----HH--TTEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC----------CeEEEEECCcc-ccc---eE-EccCCCCccc-----cc--CCcC
Confidence 45679999999999 49999887543 57999999982 333 78 9999986421 11 3799
Q ss_pred EEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCC
Q psy1489 139 VVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRN 189 (229)
Q Consensus 139 ~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~ 189 (229)
+|.+--+| . ++...+++.|.+ -|..++++.+.+..
T Consensus 92 LIYsirPP-----~--------El~~~i~~lA~~---v~adliI~pL~~E~ 126 (153)
T 2k4m_A 92 LIYSIRPP-----A--------EIHSSLMRVADA---VGARLIIKPLTGED 126 (153)
T ss_dssp EEEEESCC-----T--------TTHHHHHHHHHH---HTCEEEEECBTTBC
T ss_pred EEEEcCCC-----H--------HHHHHHHHHHHH---cCCCEEEEcCCCCc
Confidence 99663333 1 112233333332 36778888776543
No 282
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.15 E-value=9.6e-06 Score=73.81 Aligned_cols=130 Identities=12% Similarity=0.056 Sum_probs=79.5
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CCC--CCCeEEecCCCCChhHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YPI--DGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~~--~~~~~~~~~D~~~~~~~~ 126 (229)
.++.+|+|.|||+|++...+++++.. .....++|+|+++. ..+ .++.+. ++|....+.
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~------~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~-~gDtL~~d~-- 290 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQ------PQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLH-NADTLDEDW-- 290 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSC------TTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE-ESCTTTSCS--
T ss_pred CCCCEEeecccchhHHHHHHHHHHHh------ccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceE-ecceecccc--
Confidence 46789999999999999998887521 02468999999961 122 234567 888765310
Q ss_pred HHHHHhCCCCccEEEeCCCCCCCCCCcc----c-HHHHH-------HHHHHHHHHHHHccc-CCCEEEEeecC-----CC
Q psy1489 127 RLVTILKDDKLDVVLSDMAPNATGMREM----D-HDLIT-------QLAIAVIRFAVTYSK-PGADCLIKIWD-----GR 188 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~~~~g~~~~----d-~~~~~-------~~~~~~l~~~~~~Lk-pgG~~v~~~~~-----~~ 188 (229)
.......||+|++|++......... + .+... ..-...+..+.+.|+ |||++++.+.. +.
T Consensus 291 ---p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~ 367 (542)
T 3lkd_A 291 ---PTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGN 367 (542)
T ss_dssp ---CCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCT
T ss_pred ---cccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCc
Confidence 0023568999999988642110000 0 00000 001146778999999 99999876533 22
Q ss_pred ChHHHHHHHHhhC
Q psy1489 189 NRPQLEESITRFY 201 (229)
Q Consensus 189 ~~~~~~~~l~~~F 201 (229)
....+++.|-..+
T Consensus 368 ~~~~iRk~Lle~~ 380 (542)
T 3lkd_A 368 AEGTIRKALLEEG 380 (542)
T ss_dssp HHHHHHHHHHHTT
T ss_pred hhHHHHHHHHhCC
Confidence 2456776665444
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.14 E-value=2.2e-06 Score=70.88 Aligned_cols=115 Identities=15% Similarity=0.199 Sum_probs=71.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHH------hccCCCCCCCC-----cEEEEEeCCCCC-----------------------
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLV------NSHGYDSKQPK-----GLVLSVDKLPIY----------------------- 106 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~------~~~~~~~~~~~-----~~v~gvD~~~~~----------------------- 106 (229)
++.+|||+|+|+|..+..+++.. . |. .+++++|..|+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~--------p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~ 131 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAH--------PQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQA 131 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHC--------TTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhC--------CCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHH
Confidence 45799999999999887776643 3 42 489999987721
Q ss_pred C------------C----CCCeEEecCCCCChhHHHHHHHHhCC---CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHH
Q psy1489 107 P------------I----DGAVVLSKCDFTQPDIQDRLVTILKD---DKLDVVLSDMAPNATGMREMDHDLITQLAIAVI 167 (229)
Q Consensus 107 ~------------~----~~~~~~~~~D~~~~~~~~~i~~~~~~---~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l 167 (229)
. . .+++++ .+|+.+ .+.. +++ ..||+|+.|+.. ....+.+- ....+
T Consensus 132 ~w~~~~~g~~r~~~~~~~~~l~l~-~GDa~~-----~l~~-~~~~~~~~~D~iflD~fs-p~~~p~lw-------~~~~l 196 (257)
T 2qy6_A 132 QWPMPLPGCHRLLLDEGRVTLDLW-FGDINE-----LISQ-LDDSLNQKVDAWFLDGFA-PAKNPDMW-------TQNLF 196 (257)
T ss_dssp TCCCSCSEEEEEEEC--CEEEEEE-ESCHHH-----HGGG-SCGGGTTCEEEEEECSSC-TTTCGGGC-------CHHHH
T ss_pred hccccccchhheeccCCceEEEEE-ECcHHH-----HHhh-cccccCCeEEEEEECCCC-cccChhhc-------CHHHH
Confidence 0 0 123345 565443 1221 222 279999999732 11111110 13577
Q ss_pred HHHHHcccCCCEEEEeecCCCChHHHHHHHHhh-CC
Q psy1489 168 RFAVTYSKPGADCLIKIWDGRNRPQLEESITRF-YS 202 (229)
Q Consensus 168 ~~~~~~LkpgG~~v~~~~~~~~~~~~~~~l~~~-F~ 202 (229)
..+.+.|+|||+|+. |... ..+...|... |.
T Consensus 197 ~~l~~~L~pGG~l~t--ysaa--~~vrr~L~~aGF~ 228 (257)
T 2qy6_A 197 NAMARLARPGGTLAT--FTSA--GFVRRGLQEAGFT 228 (257)
T ss_dssp HHHHHHEEEEEEEEE--SCCB--HHHHHHHHHHTEE
T ss_pred HHHHHHcCCCcEEEE--EeCC--HHHHHHHHHCCCE
Confidence 889999999999985 4433 4566667665 54
No 284
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.14 E-value=6.9e-06 Score=67.06 Aligned_cols=90 Identities=9% Similarity=-0.109 Sum_probs=59.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-C------CC--CCCeEEecCCCCChhHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-Y------PI--DGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-~------~~--~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.+..+|||||||.|-++..+. + ..+++|+|+++ | . .. ....+. .+|....
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~---------~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~-v~D~~~~------- 163 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---G---------IASVWGCDIHQGLGDVITPFAREKDWDFTFA-LQDVLCA------- 163 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---T---------CSEEEEEESBHHHHHHHHHHHHHTTCEEEEE-ECCTTTS-------
T ss_pred CCCCeEEEecCCccHHHHHhc---c---------CCeEEEEeCCHHHHHHHHHHHHhcCCCceEE-EeecccC-------
Confidence 467899999999999888765 2 46999999997 2 1 01 234455 6776653
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHH-HHHHHHHHHHHcccCCCEEEE
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQ-LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~-~~~~~l~~~~~~LkpgG~~v~ 182 (229)
.+.+.+|+|++.... ..++ .....+..+.+.|+++|.+|-
T Consensus 164 --~~~~~~DvvLllk~l-----------h~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 164 --PPAEAGDLALIFKLL-----------PLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp --CCCCBCSEEEEESCH-----------HHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred --CCCCCcchHHHHHHH-----------HHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 335689999984421 1121 112233367778999987764
No 285
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.13 E-value=4e-06 Score=78.65 Aligned_cols=112 Identities=16% Similarity=0.069 Sum_probs=68.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCC-----------------------------------CCCcEEEEEeCCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSK-----------------------------------QPKGLVLSVDKLP 104 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~-----------------------------------~~~~~v~gvD~~~ 104 (229)
.++..|||.+||+|.+.+.++..... ..|. .+..+|+|+|+++
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~--~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~ 266 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATD--RAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA 266 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTT--CCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhh--cCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCH
Confidence 46789999999999999988875310 0000 1235899999997
Q ss_pred -CC----------CCCC-CeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q psy1489 105 -IY----------PIDG-AVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVT 172 (229)
Q Consensus 105 -~~----------~~~~-~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~ 172 (229)
+. .+.+ +++. ++|+.+.. .....+.||+|++|++. |.+..+.. .+......+....+
T Consensus 267 ~av~~A~~N~~~agv~~~i~~~-~~D~~~~~------~~~~~~~~d~Iv~NPPY---G~Rlg~~~-~l~~ly~~l~~~lk 335 (703)
T 3v97_A 267 RVIQRARTNARLAGIGELITFE-VKDVAQLT------NPLPKGPYGTVLSNPPY---GERLDSEP-ALIALHSLLGRIMK 335 (703)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEE-ECCGGGCC------CSCTTCCCCEEEECCCC---CC---CCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCceEEE-ECChhhCc------cccccCCCCEEEeCCCc---cccccchh-HHHHHHHHHHHHHH
Confidence 21 2232 6777 88877621 01112379999999875 33322211 11222344566677
Q ss_pred cccCCCEEEEee
Q psy1489 173 YSKPGADCLIKI 184 (229)
Q Consensus 173 ~LkpgG~~v~~~ 184 (229)
.+.|||.+.+-+
T Consensus 336 ~~~~g~~~~ilt 347 (703)
T 3v97_A 336 NQFGGWNLSLFS 347 (703)
T ss_dssp HHCTTCEEEEEE
T ss_pred hhCCCCeEEEEe
Confidence 777999988743
No 286
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.12 E-value=7.1e-06 Score=68.89 Aligned_cols=125 Identities=14% Similarity=0.069 Sum_probs=85.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-C---------------CCCCCeEEecCCCCChh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-Y---------------PIDGAVVLSKCDFTQPD 123 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~---------------~~~~~~~~~~~D~~~~~ 123 (229)
+...+||-||-|-|+.+..+++.. +..+|+.||+++. . .-++++++ .+|....
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~---------~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~-~~Dg~~~- 150 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK---------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV-IDDGVNF- 150 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE-ESCTTTT-
T ss_pred CCCCeEEEECCCchHHHHHHHHcC---------CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEE-echHHHH-
Confidence 345799999999999999888763 4568999999962 0 12568888 8887762
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC----CCChHHHHHHHHh
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD----GRNRPQLEESITR 199 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~----~~~~~~~~~~l~~ 199 (229)
+. -..++||+|+.|... ..+... .+ .....++.+.+.|+|||.+++..-. ......+...++.
T Consensus 151 ----l~--~~~~~yDvIi~D~~d-p~~~~~--~L----~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~ 217 (294)
T 3o4f_A 151 ----VN--QTSQTFDVIISDCTD-PIGPGE--SL----FTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSH 217 (294)
T ss_dssp ----TS--CSSCCEEEEEESCCC-CCCTTC--CS----SCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHH
T ss_pred ----Hh--hccccCCEEEEeCCC-cCCCch--hh----cCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHh
Confidence 11 235689999999863 112111 00 0125677899999999999975422 2234556677788
Q ss_pred hCCeeEEEc
Q psy1489 200 FYSQVKILK 208 (229)
Q Consensus 200 ~F~~v~~~k 208 (229)
.|..|....
T Consensus 218 ~F~~v~~~~ 226 (294)
T 3o4f_A 218 YFSDVGFYQ 226 (294)
T ss_dssp HCSEEEEEE
T ss_pred hCCceeeee
Confidence 898887664
No 287
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=98.05 E-value=1.5e-05 Score=71.28 Aligned_cols=89 Identities=17% Similarity=0.315 Sum_probs=65.2
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHH----HHHHHHHHHHHcccCCCEEEEeecCCCC--hHHHHHHHHhhCCeeEEE
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQ----LAIAVIRFAVTYSKPGADCLIKIWDGRN--RPQLEESITRFYSQVKIL 207 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~----~~~~~l~~~~~~LkpgG~~v~~~~~~~~--~~~~~~~l~~~F~~v~~~ 207 (229)
..+||+|+.|+.-.... .|+...+ ....+-..+.++|+|||+++++.+...+ .+.++..+.+.|..+.+.
T Consensus 219 ~~ryDlvfvn~~t~yr~----HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~ 294 (670)
T 4gua_A 219 QARYDLVFINIGTKYRN----HHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAA 294 (670)
T ss_dssp CCCEEEEEECCCCCCCS----CHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEE
T ss_pred CCcccEEEEecCCCccc----chHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeee
Confidence 45899999988532222 2333322 2234556789999999999999876543 577888888889999999
Q ss_pred cCCCCCCCCceEEEEeccCC
Q psy1489 208 KPPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 208 kp~~sr~~s~E~Y~v~~~~~ 227 (229)
||...-+ +.|+++|+.+|-
T Consensus 295 ~p~~~~s-nTEv~~~f~~~D 313 (670)
T 4gua_A 295 RPDCVSS-NTEMYLIFRQLD 313 (670)
T ss_dssp CCTTCSB-TTCEEEEEEEEC
T ss_pred CCCcccc-CceEEEEEEecC
Confidence 9965544 499999998874
No 288
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.03 E-value=4e-05 Score=66.57 Aligned_cols=118 Identities=10% Similarity=0.100 Sum_probs=68.4
Q ss_pred CCeeEeecCCCCchHHHHHHHHhc------cCCCCCCCCcEEEEEeCCCCC------CCCCC-----------------e
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNS------HGYDSKQPKGLVLSVDKLPIY------PIDGA-----------------V 112 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~------~~~~~~~~~~~v~gvD~~~~~------~~~~~-----------------~ 112 (229)
+.+|+|||||+|..+..+...+-. .......|.-+|+..|+-.-. .++.. -
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 589999999999999887433311 000112345688898875411 01110 1
Q ss_pred EE-e-cCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCC-CCc-c----------c-------------H--HHHHHHH
Q psy1489 113 VL-S-KCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATG-MRE-M----------D-------------H--DLITQLA 163 (229)
Q Consensus 113 ~~-~-~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g-~~~-~----------d-------------~--~~~~~~~ 163 (229)
++ + .+.+.. ..+++++||+|+|+.+..+.. .+. . + . .+.....
T Consensus 133 f~~gvpgSFy~--------rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~ 204 (374)
T 3b5i_A 133 FVAGVPGSFYR--------RLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADL 204 (374)
T ss_dssp EEEEEESCTTS--------CCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhc--------ccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHH
Confidence 11 0 222222 236789999999998754321 110 0 0 0 0111234
Q ss_pred HHHHHHHHHcccCCCEEEEeecCC
Q psy1489 164 IAVIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 164 ~~~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
..+|+...+.|+|||+|++.+...
T Consensus 205 ~~fL~~ra~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 205 AEFLRARAAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCCEEEEEEecC
Confidence 567888999999999999977644
No 289
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.00 E-value=3.2e-06 Score=65.07 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=64.3
Q ss_pred cCCCCeeEeecCCCCch--HHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCC
Q psy1489 59 LRPGLKVLDCGAAPGSW--SQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDK 136 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~--s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~ 136 (229)
+++|.+|||+|||.... +..+.+... +. ...++.+. .+|+.+... ..+++++
T Consensus 10 ~~~g~~vL~~~~g~v~vD~s~~ml~~a~----------------~~----~~~~~~~~-~~d~~~~~~-----~~~~~~~ 63 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSPVEALKGLVDKLQ----------------AL----TGNEGRVS-VENIKQLLQ-----SAHKESS 63 (176)
T ss_dssp CCTTSEEEEEECTTSCHHHHHHHHHHHH----------------HH----TTTTSEEE-EEEGGGGGG-----GCCCSSC
T ss_pred CCCCCEEEEecCCceeeeCCHHHHHHHH----------------Hh----cccCcEEE-EechhcCcc-----ccCCCCC
Confidence 57899999999998541 111111111 00 00136777 787766320 0025778
Q ss_pred ccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC---------CCChHHHHHHHHhh-C
Q psy1489 137 LDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD---------GRNRPQLEESITRF-Y 201 (229)
Q Consensus 137 ~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~---------~~~~~~~~~~l~~~-F 201 (229)
||+|++....... ..+ ...++.++.++|||||.|++.... .....++...++.. |
T Consensus 64 fD~V~~~~~l~~~---~~~-------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 64 FDIILSGLVPGST---TLH-------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp EEEEEECCSTTCC---CCC-------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred EeEEEECChhhhc---ccC-------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 9999996654211 011 146889999999999999985321 11256777888765 6
No 290
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.99 E-value=6.8e-06 Score=67.67 Aligned_cols=73 Identities=7% Similarity=-0.002 Sum_probs=49.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-----CC---CCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-----YP---IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-----~~---~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+.++.+|||+|||+|.++. ++ +. ...+|+|+|+++ | .. .++++++ ++|+.+.+......
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~~---------~~~~v~avEid~~~~~~a~~~~~~~~~v~~i-~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-GE---------RLDQLTVIELDRDLAARLQTHPFLGPKLTIY-QQDAMTFNFGELAE 86 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-HT---------TCSCEEEECCCHHHHHHHHTCTTTGGGEEEE-CSCGGGCCHHHHHH
T ss_pred CCCcCEEEEECCCCcHHHH-hh-hC---------CCCeEEEEECCHHHHHHHHHHhccCCceEEE-ECchhhCCHHHhhc
Confidence 4578899999999999999 54 32 222399999996 2 11 2368899 99988754332111
Q ss_pred HHhCCCCccEEEeCCCC
Q psy1489 130 TILKDDKLDVVLSDMAP 146 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~ 146 (229)
. ....|.|++|.+.
T Consensus 87 ~---~~~~~~vvsNlPY 100 (252)
T 1qyr_A 87 K---MGQPLRVFGNLPY 100 (252)
T ss_dssp H---HTSCEEEEEECCT
T ss_pred c---cCCceEEEECCCC
Confidence 0 1246899998865
No 291
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.93 E-value=1.2e-05 Score=73.26 Aligned_cols=129 Identities=14% Similarity=0.087 Sum_probs=73.4
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCC------CCCcEEEEEeCCCC-----------CCCC-CCeEEecCCCCChhH
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSK------QPKGLVLSVDKLPI-----------YPID-GAVVLSKCDFTQPDI 124 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~------~~~~~v~gvD~~~~-----------~~~~-~~~~~~~~D~~~~~~ 124 (229)
.+|||.|||+|++...+++++........ .....++|+|+++. ..+. .+.+. ++|.....
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~-~gDtL~~~- 323 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKK-NADSFLDD- 323 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSS-SCCTTTSC-
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCccccee-ccchhcCc-
Confidence 39999999999998887765420000000 00247999999961 1111 12224 67754421
Q ss_pred HHHHHHHhCCCCccEEEeCCCCCCCCCCc--------------------ccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 125 QDRLVTILKDDKLDVVLSDMAPNATGMRE--------------------MDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 125 ~~~i~~~~~~~~~D~V~sd~~~~~~g~~~--------------------~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
...+.+||+|++|++........ ...... .-...+..+.+.|+|||++++.+
T Consensus 324 ------~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~--~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 324 ------QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGN--ANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp ------SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTC--THHHHHHHHHHTEEEEEEEEEEE
T ss_pred ------ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcc--hhHHHHHHHHHHhccCceEEEEe
Confidence 12356899999998864321000 000000 01146777999999999988765
Q ss_pred cC-----C-CChHHHHHHHHhhC
Q psy1489 185 WD-----G-RNRPQLEESITRFY 201 (229)
Q Consensus 185 ~~-----~-~~~~~~~~~l~~~F 201 (229)
.. . .....+++.|...+
T Consensus 396 P~g~L~~~~~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 396 ANGSMSSNTNNEGEIRKTLVEQD 418 (544)
T ss_dssp ETHHHHCCGGGHHHHHHHHHHTT
T ss_pred cchhhhcCcchHHHHHHHHHhCC
Confidence 32 2 23466776665544
No 292
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.89 E-value=8.7e-06 Score=66.87 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=49.9
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C------CCCCCCeEEecCCCCChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I------YPIDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~------~~~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
+.++.+|||+|||+|.++..++++ +.++|+|+|+++ | ....+++++ ++|+.+.+.. .
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~----------~~~~v~avEid~~~~~~~~~~~~~~v~~i-~~D~~~~~~~----~- 92 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQH----------PLKKLYVIELDREMVENLKSIGDERLEVI-NEDASKFPFC----S- 92 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTS----------CCSEEEEECCCHHHHHHHTTSCCTTEEEE-CSCTTTCCGG----G-
T ss_pred CCCcCEEEEEcCchHHHHHHHHHc----------CCCeEEEEECCHHHHHHHHhccCCCeEEE-EcchhhCChh----H-
Confidence 356889999999999999998875 246999999996 2 122367888 9999874321 1
Q ss_pred hCCCCccEEEeCCCC
Q psy1489 132 LKDDKLDVVLSDMAP 146 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~ 146 (229)
+.+ . ..|++|.+.
T Consensus 93 ~~~-~-~~vv~NlPy 105 (249)
T 3ftd_A 93 LGK-E-LKVVGNLPY 105 (249)
T ss_dssp SCS-S-EEEEEECCT
T ss_pred ccC-C-cEEEEECch
Confidence 111 3 378887764
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.84 E-value=2.5e-05 Score=67.72 Aligned_cols=130 Identities=21% Similarity=0.172 Sum_probs=79.6
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-C-------C-----------CCCCeEEecCCCCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-Y-------P-----------IDGAVVLSKCDFTQ 121 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~-------~-----------~~~~~~~~~~D~~~ 121 (229)
+..+||-||-|-|+.+..+++. +..+|+.||+++. . + .++++++ .+|...
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh----------~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vi-i~Da~~ 273 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL----------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVL-IEDCIP 273 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT----------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEE-ESCHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc----------CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeee-hHHHHH
Confidence 4589999999999999888764 3368999999961 0 1 0235555 555433
Q ss_pred hhHHHHHHHH-hCCCCccEEEeCCCCCC-CCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCC---CChHHHHHH
Q psy1489 122 PDIQDRLVTI-LKDDKLDVVLSDMAPNA-TGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDG---RNRPQLEES 196 (229)
Q Consensus 122 ~~~~~~i~~~-~~~~~~D~V~sd~~~~~-~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~---~~~~~~~~~ 196 (229)
.+.+. -..++||+|+.|..... ...... ..........++.+.+.|+|||.+++..-.. .....+...
T Consensus 274 -----fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g--~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~t 346 (381)
T 3c6k_A 274 -----VLKRYAKEGREFDYVINDLTAVPISTSPEE--DSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQ 346 (381)
T ss_dssp -----HHHHHHHHTCCEEEEEEECCSSCCCCC------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHH
T ss_pred -----HHHhhhhccCceeEEEECCCCCcccCcccC--cchHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHH
Confidence 12221 12468999999975211 111111 0111123467888999999999998753221 123445677
Q ss_pred HHhhCCeeEEEc
Q psy1489 197 ITRFYSQVKILK 208 (229)
Q Consensus 197 l~~~F~~v~~~k 208 (229)
+++.|..|....
T Consensus 347 l~~vF~~v~~~~ 358 (381)
T 3c6k_A 347 LGRLYCPVEFSK 358 (381)
T ss_dssp HTTSSSCEEEEE
T ss_pred HHHhCCcceEee
Confidence 777788776543
No 294
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.83 E-value=5.8e-05 Score=59.96 Aligned_cols=110 Identities=19% Similarity=0.117 Sum_probs=67.6
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CC---CCCCeEEecCCCCCh---
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YP---IDGAVVLSKCDFTQP--- 122 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~---~~~~~~~~~~D~~~~--- 122 (229)
.+..+||++|| |.-+..+|+ . ++++|+.+|.++. .. ..+++++ .+|+.+.
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~-~---------~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~-~gda~~~~~w 95 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAE-L---------PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIV-WTDIGPTGDW 95 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHT-S---------TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEE-ECCCSSBCGG
T ss_pred hCCCEEEEECc--hHHHHHHHH-c---------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEE-EeCchhhhcc
Confidence 45689999998 455555554 2 3589999999861 12 2357788 8886542
Q ss_pred ---------hHHHHHH-HH--h-CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee-cCCC
Q psy1489 123 ---------DIQDRLV-TI--L-KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI-WDGR 188 (229)
Q Consensus 123 ---------~~~~~i~-~~--~-~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~-~~~~ 188 (229)
+....+. .. + ..++||+|+.|+.. . ...+..+.+.|+|||.+++.- ...+
T Consensus 96 g~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~-------~~~~~~~l~~l~~GG~Iv~DNv~~r~ 159 (202)
T 3cvo_A 96 GHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF---------R-------VGCALATAFSITRPVTLLFDDYSQRR 159 (202)
T ss_dssp GCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS---------H-------HHHHHHHHHHCSSCEEEEETTGGGCS
T ss_pred cccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC---------c-------hhHHHHHHHhcCCCeEEEEeCCcCCc
Confidence 1111111 11 1 23689999999843 1 123444778999999998743 3345
Q ss_pred ChHHHHHHHH
Q psy1489 189 NRPQLEESIT 198 (229)
Q Consensus 189 ~~~~~~~~l~ 198 (229)
....+.+.+.
T Consensus 160 ~y~~v~~~~~ 169 (202)
T 3cvo_A 160 WQHQVEEFLG 169 (202)
T ss_dssp SGGGGHHHHC
T ss_pred chHHHHHHHh
Confidence 5566655554
No 295
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.81 E-value=1.3e-05 Score=66.86 Aligned_cols=74 Identities=9% Similarity=0.087 Sum_probs=51.6
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCC-CcEEEEEeCCC-CCC------CCCCeEEecCCCCChhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQP-KGLVLSVDKLP-IYP------IDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~-~~~v~gvD~~~-~~~------~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
+.++.+|||+|||+|.++..++++.. . .++|+|+|+++ |.. ..+++++ ++|+.+.+.. .
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~--------~~~~~V~avDid~~~l~~a~~~~~~~v~~i-~~D~~~~~~~----~ 106 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLA--------TPGSPLHAVELDRDLIGRLEQRFGELLELH-AGDALTFDFG----S 106 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHC--------BTTBCEEEEECCHHHHHHHHHHHGGGEEEE-ESCGGGCCGG----G
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCC--------CcCCeEEEEECCHHHHHHHHHhcCCCcEEE-ECChhcCChh----H
Confidence 45789999999999999999998863 1 24599999997 311 2468888 9998774321 1
Q ss_pred HhCCC--CccEEEeCCC
Q psy1489 131 ILKDD--KLDVVLSDMA 145 (229)
Q Consensus 131 ~~~~~--~~D~V~sd~~ 145 (229)
..++. ..+.|++|.+
T Consensus 107 ~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 107 IARPGDEPSLRIIGNLP 123 (279)
T ss_dssp GSCSSSSCCEEEEEECC
T ss_pred hcccccCCceEEEEccC
Confidence 12111 3457888775
No 296
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.79 E-value=5e-05 Score=63.22 Aligned_cols=72 Identities=22% Similarity=0.381 Sum_probs=53.7
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-C----CC--CCCeEEecCCCCChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-Y----PI--DGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~----~~--~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
++++..+||.+||.|+.+..++++ + ++|+|+|.++. . .+ +++.++ ++|+.+.... + ..
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~----------g~VigiD~Dp~Ai~~A~~L~~~rv~lv-~~~f~~l~~~--L-~~ 84 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-G----------GRVIGLDQDPEAVARAKGLHLPGLTVV-QGNFRHLKRH--L-AA 84 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-T----------CEEEEEESCHHHHHHHHHTCCTTEEEE-ESCGGGHHHH--H-HH
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-C----------CEEEEEeCCHHHHHHHHhhccCCEEEE-ECCcchHHHH--H-HH
Confidence 467899999999999999999986 3 69999999971 0 02 468888 9998874321 2 22
Q ss_pred hCCCCccEEEeCCC
Q psy1489 132 LKDDKLDVVLSDMA 145 (229)
Q Consensus 132 ~~~~~~D~V~sd~~ 145 (229)
....++|.|++|..
T Consensus 85 ~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 85 LGVERVDGILADLG 98 (285)
T ss_dssp TTCSCEEEEEEECS
T ss_pred cCCCCcCEEEeCCc
Confidence 33367999998764
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.79 E-value=7.6e-05 Score=67.75 Aligned_cols=142 Identities=11% Similarity=0.119 Sum_probs=75.8
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCC----CCCcEEEEEeCCCC-----------CCCCCCeEEecCCCCChh
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSK----QPKGLVLSVDKLPI-----------YPIDGAVVLSKCDFTQPD 123 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~----~~~~~v~gvD~~~~-----------~~~~~~~~~~~~D~~~~~ 123 (229)
..++.+|+|-+||+|+|...+.+++........ .....++|+|+++. ..+....+. .+|.....
T Consensus 215 p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~-~~dtL~~~ 293 (530)
T 3ufb_A 215 PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRID-PENSLRFP 293 (530)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEE-CSCTTCSC
T ss_pred cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccccc-ccccccCc
Confidence 456889999999999999888777642111000 01236999999861 122334455 67754321
Q ss_pred HHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHH-------HHHHHHHHHHHHHccc-------CCCEEEEeec----
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLI-------TQLAIAVIRFAVTYSK-------PGADCLIKIW---- 185 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~-------~~~~~~~l~~~~~~Lk-------pgG~~v~~~~---- 185 (229)
. ....+..+||+|++|++..... ..+.... .......+..+.+.|+ |||++.+.+.
T Consensus 294 ~----~~~~~~~~fD~Il~NPPf~~~~--~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~L 367 (530)
T 3ufb_A 294 L----REMGDKDRVDVILTNPPFGGEE--EKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTL 367 (530)
T ss_dssp G----GGCCGGGCBSEEEECCCSSCBC--CHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHH
T ss_pred h----hhhcccccceEEEecCCCCccc--cccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhh
Confidence 1 0112245799999998863211 1000000 0001123444555554 7999887653
Q ss_pred -CCCChHHHHHHHHhhCCeeEEE
Q psy1489 186 -DGRNRPQLEESITRFYSQVKIL 207 (229)
Q Consensus 186 -~~~~~~~~~~~l~~~F~~v~~~ 207 (229)
.+.....+++.|-..+.-..+.
T Consensus 368 f~~~~~~~iRk~Lle~~~l~aII 390 (530)
T 3ufb_A 368 FSDGISARIKEELLKNFNLHTIV 390 (530)
T ss_dssp HCCTHHHHHHHHHHHHSEEEEEE
T ss_pred hccchHHHHHHHHhhcCEEEEEE
Confidence 2333345666665544333333
No 298
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.75 E-value=0.00013 Score=63.54 Aligned_cols=120 Identities=12% Similarity=0.012 Sum_probs=65.6
Q ss_pred CCeeEeecCCCCchHHHHHHHHhc-c--CC-----CCCCCCcEEEEEeCCCCC------CC--------------CCCeE
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNS-H--GY-----DSKQPKGLVLSVDKLPIY------PI--------------DGAVV 113 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~-~--~~-----~~~~~~~~v~gvD~~~~~------~~--------------~~~~~ 113 (229)
..+|+||||++|..+..+...+=. . .. ....|.-+|+..|+-... .+ .+.-+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999999887765210 0 00 001234567777764200 00 01122
Q ss_pred EecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCC-CCCcc-c-------------------H-H------HHHHHHHH
Q psy1489 114 LSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNAT-GMREM-D-------------------H-D------LITQLAIA 165 (229)
Q Consensus 114 ~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~-g~~~~-d-------------------~-~------~~~~~~~~ 165 (229)
+ .+.-..- ....++++++|+|+|+.+..+. ..+.. . . . +.......
T Consensus 133 ~-~gvpgSF-----y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 133 I-GAMPGSF-----YSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp E-EECCSCT-----TSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred E-Eecchhh-----hhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 2 2221110 0124678899999999875431 11100 0 0 0 11123345
Q ss_pred HHHHHHHcccCCCEEEEeecCC
Q psy1489 166 VIRFAVTYSKPGADCLIKIWDG 187 (229)
Q Consensus 166 ~l~~~~~~LkpgG~~v~~~~~~ 187 (229)
.|+.-.+.|+|||+|++.+...
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHhccCCeEEEEEecC
Confidence 6788899999999999977544
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.67 E-value=3.6e-05 Score=65.55 Aligned_cols=83 Identities=18% Similarity=0.244 Sum_probs=58.5
Q ss_pred hhhhhcCccCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----CC--CCCCeEEecCCCCChh
Q psy1489 51 EIDSKIKFLRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----YP--IDGAVVLSKCDFTQPD 123 (229)
Q Consensus 51 ~i~~~~~~~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----~~--~~~~~~~~~~D~~~~~ 123 (229)
|+.+.+. +++|..++|..||.|+.+..++++++ +.++|+|+|.++. .. ..++.++ ++++.+..
T Consensus 48 Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg--------~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv-~~nF~~l~ 117 (347)
T 3tka_A 48 EAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLG--------EEGRLLAIDRDPQAIAVAKTIDDPRFSII-HGPFSALG 117 (347)
T ss_dssp HHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCC--------TTCEEEEEESCHHHHHHHTTCCCTTEEEE-ESCGGGHH
T ss_pred HHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCC--------CCCEEEEEECCHHHHHHHHhhcCCcEEEE-eCCHHHHH
Confidence 3334444 47899999999999999999999876 7899999999971 11 2457788 88877732
Q ss_pred HHHHHHHHhCCCCccEEEeCCC
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMA 145 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~ 145 (229)
..+...--.+++|.|+.|..
T Consensus 118 --~~L~~~g~~~~vDgILfDLG 137 (347)
T 3tka_A 118 --EYVAERDLIGKIDGILLDLG 137 (347)
T ss_dssp --HHHHHTTCTTCEEEEEEECS
T ss_pred --HHHHhcCCCCcccEEEECCc
Confidence 11221101136999999864
No 300
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.66 E-value=9.3e-05 Score=63.87 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=68.7
Q ss_pred CCCeeEeecCCCCchHHHHHHH--------HhccCCCCCCCCcEEEEEeCCCC------CCCC------CCeEE-e-cCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKL--------VNSHGYDSKQPKGLVLSVDKLPI------YPID------GAVVL-S-KCD 118 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~--------~~~~~~~~~~~~~~v~gvD~~~~------~~~~------~~~~~-~-~~D 118 (229)
...+|+||||++|..+..+... ....+ ....|.-+|+..|+-.- ..++ +..++ + .+.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~-~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMG-RENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSS-CSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcC-CCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 4478999999999877654322 11001 00135568999998641 1122 12233 0 233
Q ss_pred CCChhHHHHHHHHhCCCCccEEEeCCCCCCC-CCC----c-----------------ccHHHHHHHHHHHHHHHHHcccC
Q psy1489 119 FTQPDIQDRLVTILKDDKLDVVLSDMAPNAT-GMR----E-----------------MDHDLITQLAIAVIRFAVTYSKP 176 (229)
Q Consensus 119 ~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~-g~~----~-----------------~d~~~~~~~~~~~l~~~~~~Lkp 176 (229)
+.. ..++++++|+|+|+.+..+. ..+ + .-...........|+.-.+.|+|
T Consensus 130 Fy~--------rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p 201 (359)
T 1m6e_X 130 FYG--------RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP 201 (359)
T ss_dssp SSS--------CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT
T ss_pred hhh--------ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 332 34788999999999875321 111 0 11112233455778888999999
Q ss_pred CCEEEEeecC
Q psy1489 177 GADCLIKIWD 186 (229)
Q Consensus 177 gG~~v~~~~~ 186 (229)
||+|++.+..
T Consensus 202 GG~mvl~~~g 211 (359)
T 1m6e_X 202 GGRMVLTILG 211 (359)
T ss_dssp TCEEEEEEEE
T ss_pred CceEEEEEec
Confidence 9999997754
No 301
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.40 E-value=0.0002 Score=59.84 Aligned_cols=100 Identities=15% Similarity=0.088 Sum_probs=66.0
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CC----------------------------------
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IY---------------------------------- 106 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~---------------------------------- 106 (229)
...||++|+..|.-+..++..+...+ .+.++|+++|..+ +.
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g----~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~ 182 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHD----VRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFR 182 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTT----CCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHH
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcC----CCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHH
Confidence 46999999999999988887653100 0257899999753 10
Q ss_pred --C--CCCCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 107 --P--IDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 107 --~--~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
. ..+++++ .+|+.+. +.. +++++||+|+.|+.. . +.....|..+...|+|||.+++
T Consensus 183 ~~gl~~~~I~li-~Gda~et-----L~~-~~~~~~d~vfIDaD~----------y---~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 183 NYDLLDEQVRFL-PGWFKDT-----LPT-APIDTLAVLRMDGDL----------Y---ESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp HTTCCSTTEEEE-ESCHHHH-----STT-CCCCCEEEEEECCCS----------H---HHHHHHHHHHGGGEEEEEEEEE
T ss_pred HcCCCcCceEEE-EeCHHHH-----Hhh-CCCCCEEEEEEcCCc----------c---ccHHHHHHHHHhhcCCCEEEEE
Confidence 0 1346666 7765331 111 335689999998731 1 1234567889999999999987
Q ss_pred eec
Q psy1489 183 KIW 185 (229)
Q Consensus 183 ~~~ 185 (229)
.-+
T Consensus 243 DD~ 245 (282)
T 2wk1_A 243 DDY 245 (282)
T ss_dssp SSC
T ss_pred cCC
Confidence 554
No 302
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.80 E-value=0.002 Score=50.12 Aligned_cols=95 Identities=22% Similarity=0.252 Sum_probs=57.7
Q ss_pred cCCCCeeEeecCCC--CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CC--CCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP--GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YP--IDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp--G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~--~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||..|++. |.....++...| .+|+++|.++- .. -.++... .|..+.+..+.+.+..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G----------~~V~~~~~~~~~~~~~~~~g~~~~--~d~~~~~~~~~~~~~~ 103 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIG----------ARIYTTAGSDAKREMLSRLGVEYV--GDSRSVDFADEILELT 103 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT----------CEEEEEESSHHHHHHHHTTCCSEE--EETTCSTHHHHHHHHT
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHcCCCEE--eeCCcHHHHHHHHHHh
Confidence 56899999999532 444444444433 58999998751 00 1122222 2444444445555555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+..... ..+..+.+.|++||++++.
T Consensus 104 ~~~~~D~vi~~~g~------------------~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 104 DGYGVDVVLNSLAG------------------EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TTCCEEEEEECCCT------------------HHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEECCch------------------HHHHHHHHHhccCCEEEEE
Confidence 45579999985421 1345688899999999864
No 303
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.79 E-value=0.0012 Score=57.41 Aligned_cols=106 Identities=18% Similarity=0.293 Sum_probs=63.0
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhH-HHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDI-QDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~-~~~i~~~~ 132 (229)
+++|++||.+|||+ |.++..+++..+ ..+|+++|.++- . .--++..+ |..+.+. .+.+.+..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~~lGa~~i---~~~~~~~~~~~~~~~~ 250 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLG---------AACVIVGDQNPERLKLLSDAGFETI---DLRNSAPLRDQIDQIL 250 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT---------CSEEEEEESCHHHHHHHHTTTCEEE---ETTSSSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEEcCCHHHHHHHHHcCCcEE---cCCCcchHHHHHHHHh
Confidence 57899999999987 777777887764 348999998861 1 11234444 2223232 34455545
Q ss_pred CCCCccEEEeCCCCCCCCCCcc----cHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREM----DHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~----d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+-... .... +... ......+..+.+.|++||++++.
T Consensus 251 ~g~g~Dvvid~~g-----~~~~~~~~~~~~--~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 251 GKPEVDCGVDAVG-----FEAHGLGDEANT--ETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SSSCEEEEEECSC-----TTCBCSGGGTTS--BCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCCCCEEEECCC-----Cccccccccccc--cccHHHHHHHHHHHhcCCEEEEe
Confidence 5557999997432 1110 0000 00012456688899999998753
No 304
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.71 E-value=0.0014 Score=56.26 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=60.9
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCe-EEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAV-VLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~-~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++- ... -++. ++ |..+.+..+.+.+..
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G---------a~~Vi~~~~~~~~~~~a~~lGa~~vi---~~~~~~~~~~~~~~~ 255 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG---------ASIIIAVDIVESRLELAKQLGATHVI---NSKTQDPVAAIKEIT 255 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT---------CSEEEEEESCHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEECCCHHHHHHHHHcCCCEEe---cCCccCHHHHHHHhc
Confidence 56899999999887 777777777764 237999998761 100 1222 23 222333344455544
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+ .+|+|+..... ...+..+.+.|+++|++++.
T Consensus 256 ~g-g~D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 256 DG-GVNFALESTGS-----------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp TS-CEEEEEECSCC-----------------HHHHHHHHHTEEEEEEEEEC
T ss_pred CC-CCcEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEe
Confidence 44 89999974321 13466788999999999874
No 305
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.70 E-value=0.0033 Score=53.70 Aligned_cols=96 Identities=24% Similarity=0.302 Sum_probs=60.5
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCC-eEEecCCCC---ChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGA-VVLSKCDFT---QPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~-~~~~~~D~~---~~~~~~~i~ 129 (229)
+++|++||-+|+|+ |.++..+++..+ ..+|+++|.++- . .--++ .++ |.. +.+....+.
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~~lGa~~vi---~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMG---------AAQVVVTDLSATRLSKAKEIGADLVL---QISKESPQEIARKVE 236 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEEESCHHHHHHHHHTTCSEEE---ECSSCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHhCCCEEE---cCcccccchHHHHHH
Confidence 57899999999876 666677776653 238999998761 1 01123 222 222 133444455
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+... ..+|+|+..... ...+..+.+.|++||++++.-
T Consensus 237 ~~~~-~g~D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 237 GQLG-CKPEVTIECTGA-----------------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHT-SCCSEEEECSCC-----------------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHhC-CCCCEEEECCCC-----------------hHHHHHHHHHhcCCCEEEEEe
Confidence 5444 679999974321 124566888999999998743
No 306
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.67 E-value=0.0041 Score=53.91 Aligned_cols=73 Identities=14% Similarity=0.057 Sum_probs=51.5
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CCCCCCeEEecCCCCChhHHHHHHHHhCCCC
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YPIDGAVVLSKCDFTQPDIQDRLVTILKDDK 136 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~ 136 (229)
.+|+||.||.|+++.-+.+. | -..|.++|+++. ...++..++ .+|+.+..........+....
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G---------~~~v~avE~d~~a~~t~~~N~~~~~~~-~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G---------FDVKMAVEIDQHAINTHAINFPRSLHV-QEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T---------CEEEEEECSCHHHHHHHHHHCTTSEEE-CCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHHHHHHC-C---------CcEEEEEeCCHHHHHHHHHhCCCCceE-ecChhhcCHHHHHhhcccCCC
Confidence 58999999999999987764 2 246789999872 134567788 899887543221112234568
Q ss_pred ccEEEeCCCC
Q psy1489 137 LDVVLSDMAP 146 (229)
Q Consensus 137 ~D~V~sd~~~ 146 (229)
+|+|+.+.++
T Consensus 72 ~D~i~ggpPC 81 (376)
T 3g7u_A 72 IDGIIGGPPC 81 (376)
T ss_dssp CCEEEECCCC
T ss_pred eeEEEecCCC
Confidence 9999998764
No 307
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.60 E-value=0.0097 Score=50.81 Aligned_cols=99 Identities=21% Similarity=0.193 Sum_probs=62.9
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----CCC-CCCeEEecCC-CCChhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----YPI-DGAVVLSKCD-FTQPDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----~~~-~~~~~~~~~D-~~~~~~~~~i~~ 130 (229)
+++|++||-+|+|+ |.++..+++..| ...|+++|.++- ..+ ..+... ..| ....+..+.+.+
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~~l~~~~~~~-~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAG---------ACPLVITDIDEGRLKFAKEICPEVVTH-KVERLSAEESAKKIVE 246 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTT---------CCSEEEEESCHHHHHHHHHHCTTCEEE-ECCSCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHhchhcccc-cccccchHHHHHHHHH
Confidence 57899999999876 667777777654 234999998761 011 122112 222 122445555666
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
...+..+|+|+-.... ...+..+.+.|++||++++.-
T Consensus 247 ~t~g~g~Dvvid~~g~-----------------~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV-----------------ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSCC-----------------HHHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEECCCC-----------------hHHHHHHHHHhcCCCEEEEEc
Confidence 6666789999973321 124566888999999998743
No 308
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.55 E-value=0.0039 Score=53.12 Aligned_cols=95 Identities=20% Similarity=0.281 Sum_probs=58.5
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCe-EEecCCCCC-hhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAV-VLSKCDFTQ-PDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~-~~~~~D~~~-~~~~~~i~~~ 131 (229)
+++|++||-+|+|+ |.++..+++..+ .+|+++|.++- . .--++. ++ |..+ .+..+.+.+.
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~G----------a~Vi~~~~~~~~~~~~~~lGa~~~~---~~~~~~~~~~~i~~~ 232 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYG----------AFVVCTARSPRRLEVAKNCGADVTL---VVDPAKEEESSIIER 232 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT----------CEEEEEESCHHHHHHHHHTTCSEEE---ECCTTTSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC----------CEEEEEcCCHHHHHHHHHhCCCEEE---cCcccccHHHHHHHH
Confidence 57899999999865 556666666554 47999998751 0 011222 22 2222 2333344444
Q ss_pred hC---CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LK---DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~---~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.. +..+|+|+..... ...+..+.+.|+++|++++.
T Consensus 233 ~~~~~g~g~D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCSGN-----------------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHHSSSCCSEEEECSCC-----------------HHHHHHHHHHSCTTCEEEEC
T ss_pred hccccCCCCCEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 43 4579999974321 12456688899999999864
No 309
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.52 E-value=0.003 Score=53.59 Aligned_cols=97 Identities=19% Similarity=0.069 Sum_probs=63.2
Q ss_pred cCCCCeeEeecCCCC-chHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCC-eEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAPG-SWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGA-VVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG-~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~-~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+|+|++ +++..+++.. ...+|+++|.++- . ..-++ .++ |..+.+..+.+.+..
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~---------~g~~Vi~~~~~~~r~~~~~~~Ga~~~i---~~~~~~~~~~v~~~t 228 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNV---------FGAKVIAVDINQDKLNLAKKIGADVTI---NSGDVNPVDEIKKIT 228 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT---------SCCEEEEEESCHHHHHHHHHTTCSEEE---EC-CCCHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHh---------CCCEEEEEECcHHHhhhhhhcCCeEEE---eCCCCCHHHHhhhhc
Confidence 578999999999984 4555555554 3469999999861 0 11122 233 334444556676666
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.+..+|.++.+... ...+..+.+.|+++|++++.-
T Consensus 229 ~g~g~d~~~~~~~~-----------------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 229 GGLGVQSAIVCAVA-----------------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp TSSCEEEEEECCSC-----------------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEEeccC-----------------cchhheeheeecCCceEEEEe
Confidence 66778888875421 135667889999999988643
No 310
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.52 E-value=0.012 Score=50.72 Aligned_cols=96 Identities=19% Similarity=0.233 Sum_probs=62.0
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----CCCCCe-EEecCCCC--ChhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----PIDGAV-VLSKCDFT--QPDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----~~~~~~-~~~~~D~~--~~~~~~~i~~ 130 (229)
+++|++||-+|+|+ |.++..+++..+ ..+|+++|.++-. .--++. ++ |.. +.+..+.+.+
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~G---------a~~Vi~~~~~~~~~~~a~~lGa~~vi---~~~~~~~~~~~~i~~ 258 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAG---------ASRIIGIDIDSKKYETAKKFGVNEFV---NPKDHDKPIQEVIVD 258 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHT---------CSCEEEECSCTTHHHHHHTTTCCEEE---CGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHHHHcCCcEEE---ccccCchhHHHHHHH
Confidence 57899999999977 777777777764 3489999988611 111222 23 222 2334445555
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEee
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIKI 184 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~~ 184 (229)
...+ .+|+|+-.. |. ...+..+.+.|++| |++++.-
T Consensus 259 ~~~g-g~D~vid~~-----g~------------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 259 LTDG-GVDYSFECI-----GN------------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HTTS-CBSEEEECS-----CC------------HHHHHHHHHTBCTTTCEEEECS
T ss_pred hcCC-CCCEEEECC-----CC------------HHHHHHHHHHhhccCCEEEEEc
Confidence 5544 899999733 21 13566788999997 9988643
No 311
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.46 E-value=0.0093 Score=50.46 Aligned_cols=70 Identities=7% Similarity=0.145 Sum_probs=46.6
Q ss_pred CCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCC---CCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 110 GAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATG---MREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 110 ~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g---~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
...++ .+|..+ ....+++++||+|++|++..... .....+..........+.++.++|+|||.+++.+..
T Consensus 14 ~~~ii-~gD~~~------~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 14 NGSMY-IGDSLE------LLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SEEEE-ESCHHH------HGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEE-eCcHHH------HHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 34566 777543 22346678999999999864321 111223334455678899999999999999987644
No 312
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.45 E-value=0.01 Score=50.99 Aligned_cols=53 Identities=21% Similarity=0.064 Sum_probs=42.7
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-C-------CCCCCCeEEecCCCCChh
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-I-------YPIDGAVVLSKCDFTQPD 123 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~-------~~~~~~~~~~~~D~~~~~ 123 (229)
+++.|||+|.|+|.+|..|+++. ...+|+++|+++ + ...++++++ .+|+.+.+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~---------~~~~vvavE~D~~l~~~L~~~~~~~~l~ii-~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKY---------CPRQYSLLEKRSSLYKFLNAKFEGSPLQIL-KRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH---------CCSEEEEECCCHHHHHHHHHHTTTSSCEEE-CSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhC---------CCCEEEEEecCHHHHHHHHHhccCCCEEEE-ECCccchh
Confidence 46899999999999999999874 235899999985 1 123578999 99998755
No 313
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.44 E-value=0.0015 Score=55.68 Aligned_cols=96 Identities=22% Similarity=0.276 Sum_probs=61.5
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCe-EEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAV-VLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~-~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+|+|+ |.++..+++..+ ..+|+++|.++- ... -++. ++ |..+.+..+.+.+..
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G---------a~~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLG---------AGRIFAVGSRKHCCDIALEYGATDII---NYKNGDIVEQILKAT 231 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTT---------CSSEEEECCCHHHHHHHHHHTCCEEE---CGGGSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CcEEEEECCCHHHHHHHHHhCCceEE---cCCCcCHHHHHHHHc
Confidence 57899999999876 666666666543 237999998761 100 1222 23 333334455566666
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+... |.. ..+..+.+.|++||++++.
T Consensus 232 ~g~g~D~v~d~~-----g~~------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 232 DGKGVDKVVIAG-----GDV------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp TTCCEEEEEECS-----SCT------------THHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCEEEECC-----CCh------------HHHHHHHHHHhcCCEEEEe
Confidence 666899999633 111 2456688899999999864
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.36 E-value=0.0059 Score=51.68 Aligned_cols=93 Identities=18% Similarity=0.119 Sum_probs=59.9
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCe-EEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAV-VLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~-~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.|+|+ |.++..+++..+ .+|+++|.++- . .--++. ++ |..+.+..+.+.+..
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G----------a~Vi~~~~~~~~~~~~~~lGa~~~i---~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMG----------LRVAAVDIDDAKLNLARRLGAEVAV---NARDTDPAAWLQKEI 230 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTT----------CEEEEEESCHHHHHHHHHTTCSEEE---ETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC----------CeEEEEeCCHHHHHHHHHcCCCEEE---eCCCcCHHHHHHHhC
Confidence 57899999999987 777777777654 59999998861 1 011222 23 233333444444422
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.+|+|+..... ...+..+.+.|+++|++++.
T Consensus 231 --g~~d~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 231 --GGAHGVLVTAVS-----------------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp --SSEEEEEESSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred --CCCCEEEEeCCC-----------------HHHHHHHHHHhccCCEEEEe
Confidence 379999874321 13466788899999999864
No 315
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.35 E-value=0.0017 Score=54.25 Aligned_cols=34 Identities=29% Similarity=0.227 Sum_probs=29.2
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP 104 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~ 104 (229)
.+|+.|||++||+|..+..+++. + .+++|+|+++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~-g----------~~~~g~e~~~ 267 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW-G----------RRALGVELVP 267 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-T----------CEEEEEESCH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C----------CeEEEEeCCH
Confidence 57899999999999999887654 3 5899999987
No 316
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.34 E-value=0.0039 Score=54.08 Aligned_cols=106 Identities=18% Similarity=0.325 Sum_probs=62.7
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChh-HHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPD-IQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~-~~~~i~~~~ 132 (229)
+++|++||-+|+|+ |.++..+++..| ..+|+++|.++- . .--++..+ |..+.+ ..+.+.+..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~G---------a~~Vi~~~~~~~~~~~a~~lGa~~i---~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLG---------AAVVIVGDLNPARLAHAKAQGFEIA---DLSLDTPLHEQIAALL 250 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEEESCHHHHHHHHHTTCEEE---ETTSSSCHHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC---------CCeEEEEcCCHHHHHHHHHcCCcEE---ccCCcchHHHHHHHHh
Confidence 57899999999877 777777777654 337999998861 1 11234434 222222 334455555
Q ss_pred CCCCccEEEeCCCCCCCC-----CCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATG-----MREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g-----~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+-.......+ .+..+ ....+..+.+.|++||++++.
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEA-------PATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBC-------TTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCCEEEECCCCcccccccccccccc-------hHHHHHHHHHHHhcCCEEEEe
Confidence 556799999743211000 00000 012456688999999999864
No 317
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.26 E-value=0.002 Score=55.33 Aligned_cols=94 Identities=17% Similarity=0.128 Sum_probs=61.1
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCe-EEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAV-VLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~-~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+|+|+ |..+..+++..| .+|+++|.++- ... -++. ++ |-...+..+.+.+..
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~G----------a~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~v~~~~ 253 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATG----------AEVIVTSSSREKLDRAFALGADHGI---NRLEEDWVERVYALT 253 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTT----------CEEEEEESCHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC----------CEEEEEecCchhHHHHHHcCCCEEE---cCCcccHHHHHHHHh
Confidence 57899999999877 666677777654 59999998751 100 1222 33 222233445566666
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+..... ..+..+.+.|+++|++++.
T Consensus 254 ~g~g~D~vid~~g~------------------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 254 GDRGADHILEIAGG------------------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp TTCCEEEEEEETTS------------------SCHHHHHHHEEEEEEEEEE
T ss_pred CCCCceEEEECCCh------------------HHHHHHHHHhhcCCEEEEE
Confidence 66689999974321 1244577889999999864
No 318
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.22 E-value=0.01 Score=50.98 Aligned_cols=95 Identities=19% Similarity=0.268 Sum_probs=59.0
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----CCCCCe-EEecCCCCC--hhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----PIDGAV-VLSKCDFTQ--PDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----~~~~~~-~~~~~D~~~--~~~~~~i~~ 130 (229)
+++|++||-+|+|+ |.++..+++..+ ..+|+++|.++-. .--++. ++ |..+ .+..+.+.+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~~lGa~~vi---~~~~~~~~~~~~v~~ 260 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAG---------ASRIIAIDINGEKFPKAKALGATDCL---NPRELDKPVQDVITE 260 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCGGGHHHHHHTTCSEEE---CGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHHHHhCCcEEE---ccccccchHHHHHHH
Confidence 56899999999876 666666776653 2389999987621 001222 22 2221 223344544
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~ 183 (229)
...+ .+|+|+-.. |. ...+..+.+.|+++ |++++.
T Consensus 261 ~~~~-g~Dvvid~~-----G~------------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 261 LTAG-GVDYSLDCA-----GT------------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp HHTS-CBSEEEESS-----CC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhCC-CccEEEECC-----CC------------HHHHHHHHHHhhcCCCEEEEE
Confidence 4443 899999733 11 13456788999999 999864
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.22 E-value=0.018 Score=49.29 Aligned_cols=95 Identities=17% Similarity=0.135 Sum_probs=59.7
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----CCCCCe-EEecCCCCC--hhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----PIDGAV-VLSKCDFTQ--PDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----~~~~~~-~~~~~D~~~--~~~~~~i~~ 130 (229)
+++|++||-+|+|+ |.++..+++..+ ..+|+++|.++-. .--++. ++ |..+ .+..+.+.+
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~~lGa~~vi---~~~~~~~~~~~~i~~ 256 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG---------ASRIIGVGTHKDKFPKAIELGATECL---NPKDYDKPIYEVICE 256 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT---------CSEEEEECSCGGGHHHHHHTTCSEEE---CGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEECCCHHHHHHHHHcCCcEEE---ecccccchHHHHHHH
Confidence 56899999999877 666777777664 2389999987621 001222 22 2221 223344544
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~ 183 (229)
... +.+|+|+-.. |. ...+..+.+.|+++ |++++.
T Consensus 257 ~t~-gg~Dvvid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 257 KTN-GGVDYAVECA-----GR------------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HTT-SCBSEEEECS-----CC------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhC-CCCCEEEECC-----CC------------HHHHHHHHHHHhcCCCEEEEE
Confidence 443 4899999733 11 13456788999999 999864
No 320
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.21 E-value=0.025 Score=46.39 Aligned_cols=122 Identities=13% Similarity=0.161 Sum_probs=70.8
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC---------------------------------
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP--------------------------------- 107 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~--------------------------------- 107 (229)
...|+++|+-.|+-+..++..... -++.++..+|++.|.-+ +..
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~--l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGV--YEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHH--HCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCeEEEEecccCHHHHHHHHHHHH--hcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 358999999999988776653210 00111456899998543 100
Q ss_pred ---------CCCCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCC
Q psy1489 108 ---------IDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGA 178 (229)
Q Consensus 108 ---------~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG 178 (229)
..+++++ .+++.+ +...+....+..++|+|..|+-. . +.....+..+...|+|||
T Consensus 148 ~~~~~~g~~~~~i~li-~G~~~d--TL~~~l~~~~~~~~dlv~ID~D~----------Y---~~t~~~le~~~p~l~~GG 211 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLV-EGDVRE--TVPRYLAENPQTVIALAYFDLDL----------Y---EPTKAVLEAIRPYLTKGS 211 (257)
T ss_dssp HTTSTTTTSCCSEEEE-ESCHHH--HHHHHHHHCTTCCEEEEEECCCC----------H---HHHHHHHHHHGGGEEEEE
T ss_pred hhhhhcCCCCCcEEEE-EecHHH--HHHHHHHhCCCCceEEEEEcCcc----------c---chHHHHHHHHHHHhCCCc
Confidence 0234555 555433 22222222345579999998731 1 123456777889999999
Q ss_pred EEEEeecCCCChHHHHHHHHhhC
Q psy1489 179 DCLIKIWDGRNRPQLEESITRFY 201 (229)
Q Consensus 179 ~~v~~~~~~~~~~~~~~~l~~~F 201 (229)
.+++.-+..+......+.+..++
T Consensus 212 vIv~DD~~~~~w~G~~~A~~ef~ 234 (257)
T 3tos_A 212 IVAFDELDNPKWPGENIAMRKVL 234 (257)
T ss_dssp EEEESSTTCTTCTHHHHHHHHHT
T ss_pred EEEEcCCCCCCChHHHHHHHHHH
Confidence 99987664333334444444443
No 321
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.20 E-value=0.0077 Score=51.03 Aligned_cols=95 Identities=12% Similarity=0.093 Sum_probs=61.1
Q ss_pred cCCCCeeEeecCCC--CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCC-----CCeEEecCCCCChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP--GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPID-----GAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGcGp--G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~-----~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
+++|++||-.|+|. |..+..+++..| .+|+++|.++- ..+ ++... -|..+.+..+.+.+.
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G----------a~Vi~~~~~~~-~~~~~~~lga~~~--~~~~~~~~~~~~~~~ 208 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN----------FRLIAVTRNNK-HTEELLRLGAAYV--IDTSTAPLYETVMEL 208 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT----------CEEEEEESSST-THHHHHHHTCSEE--EETTTSCHHHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC----------CEEEEEeCCHH-HHHHHHhCCCcEE--EeCCcccHHHHHHHH
Confidence 57899999999974 667777777664 59999998762 111 22211 233344455556666
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
..+..+|+|+.... . ..+..+.+.|+++|++++.-
T Consensus 209 ~~~~g~Dvvid~~g----------~--------~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 209 TNGIGADAAIDSIG----------G--------PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp TTTSCEEEEEESSC----------H--------HHHHHHHHTEEEEEEEEECC
T ss_pred hCCCCCcEEEECCC----------C--------hhHHHHHHHhcCCCEEEEEe
Confidence 66668999997442 1 11123447899999998743
No 322
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.18 E-value=0.0058 Score=51.88 Aligned_cols=95 Identities=17% Similarity=0.120 Sum_probs=62.4
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCe-EEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAV-VLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~-~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++- . .--++. ++ .. .+ +..+.+.+..
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g---------~~~Vi~~~~~~~~~~~~~~lGa~~~i-~~--~~-~~~~~v~~~t 235 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS---------AARVIAVDLDDDRLALAREVGADAAV-KS--GA-GAADAIRELT 235 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC---------CCEEEEEESCHHHHHHHHHTTCSEEE-EC--ST-THHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEEcCCHHHHHHHHHcCCCEEE-cC--CC-cHHHHHHHHh
Confidence 57899999999977 667777777662 369999998861 0 011222 33 11 22 3444555555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+-.... ...+..+.+.|+++|++++.
T Consensus 236 ~g~g~d~v~d~~G~-----------------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 236 GGQGATAVFDFVGA-----------------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp GGGCEEEEEESSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCeEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 56689999973321 13566788999999999864
No 323
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.18 E-value=0.0041 Score=52.38 Aligned_cols=96 Identities=18% Similarity=0.172 Sum_probs=62.2
Q ss_pred cCCCCeeEeec-CCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCG-AAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlG-cGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.| +|+ |..+..+++..| .+|+++|.++- ... -++... .|..+.+..+.+.+..
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALG----------AKLIGTVSSPEKAAHAKALGAWET--IDYSHEDVAKRVLELT 205 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT----------CEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHHcCCCEE--EeCCCccHHHHHHHHh
Confidence 57899999999 555 666777777664 58999998751 100 122211 2333444555566666
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.+..+|+|+.... . ..+..+.+.|+++|++++.-
T Consensus 206 ~~~g~Dvvid~~g-----~-------------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 206 DGKKCPVVYDGVG-----Q-------------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TTCCEEEEEESSC-----G-------------GGHHHHHTTEEEEEEEEECC
T ss_pred CCCCceEEEECCC-----h-------------HHHHHHHHHhcCCCEEEEEe
Confidence 6678999997442 1 13455788999999998753
No 324
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.18 E-value=0.012 Score=49.77 Aligned_cols=92 Identities=23% Similarity=0.327 Sum_probs=58.1
Q ss_pred CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--C---CCCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 61 PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--I---YPIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 61 ~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~---~~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
+|++||-+|+|+ |..+..+++..+ ..+|+++|.++ . ..+ .-.++ |..+.+..+.+.+.. +
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~G---------a~~Vi~~~~~~~~~~~~~~l-a~~v~---~~~~~~~~~~~~~~~-~ 229 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASG---------AGPILVSDPNPYRLAFARPY-ADRLV---NPLEEDLLEVVRRVT-G 229 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTT---------CCSEEEECSCHHHHGGGTTT-CSEEE---CTTTSCHHHHHHHHH-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHh-HHhcc---CcCccCHHHHHHHhc-C
Confidence 899999999965 555566666543 22899999875 1 122 22233 333334444455444 5
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+|+|+.... . ...+..+.+.|+++|++++.
T Consensus 230 ~g~D~vid~~g-----~------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 230 SGVEVLLEFSG-----N------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SCEEEEEECSC-----C------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCC-----C------------HHHHHHHHHHHhcCCEEEEE
Confidence 67999997432 1 13456688899999998864
No 325
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.16 E-value=0.013 Score=50.03 Aligned_cols=70 Identities=16% Similarity=0.206 Sum_probs=47.4
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CCCCCCeEEecCCCCChhHHHHHHHHhCCCC
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YPIDGAVVLSKCDFTQPDIQDRLVTILKDDK 136 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~ 136 (229)
.+|+||.||.|+++..+..... ....|+++|+++. ...++..++ .+|+.+.... .+. ...
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~--------~~~~v~~~E~d~~a~~~~~~N~~~~~~~-~~Di~~~~~~-~~~----~~~ 68 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCI--------PAQVVAAIDVNTVANEVYKYNFPHTQLL-AKTIEGITLE-EFD----RLS 68 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTC--------SEEEEEEECCCHHHHHHHHHHCTTSCEE-CSCGGGCCHH-HHH----HHC
T ss_pred CeEEEeCcCccHHHHHHHHCCC--------CceEEEEEeCCHHHHHHHHHhccccccc-cCCHHHccHh-HcC----cCC
Confidence 5899999999999998876520 0137999999862 123455667 8898874321 122 126
Q ss_pred ccEEEeCCCC
Q psy1489 137 LDVVLSDMAP 146 (229)
Q Consensus 137 ~D~V~sd~~~ 146 (229)
+|+|+.+.++
T Consensus 69 ~D~l~~gpPC 78 (343)
T 1g55_A 69 FDMILMSPPC 78 (343)
T ss_dssp CSEEEECCC-
T ss_pred cCEEEEcCCC
Confidence 9999998874
No 326
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.14 E-value=0.012 Score=50.46 Aligned_cols=95 Identities=18% Similarity=0.232 Sum_probs=58.6
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----CCCCCe-EEecCCCCC--hhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----PIDGAV-VLSKCDFTQ--PDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----~~~~~~-~~~~~D~~~--~~~~~~i~~ 130 (229)
+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++-. .--++. ++ |..+ .+..+.+.+
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~G---------a~~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~~~ 257 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAG---------AKRIIAVDLNPDKFEKAKVFGATDFV---NPNDHSEPISQVLSK 257 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCGGGHHHHHHTTCCEEE---CGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEEcCCHHHHHHHHHhCCceEE---eccccchhHHHHHHH
Confidence 56899999999866 566666666653 2389999987611 001232 22 2221 123334444
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~ 183 (229)
... +.+|+|+..... ...+..+.+.|+++ |++++.
T Consensus 258 ~~~-~g~D~vid~~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 258 MTN-GGVDFSLECVGN-----------------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHT-SCBSEEEECSCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhC-CCCCEEEECCCC-----------------HHHHHHHHHHhhcCCcEEEEE
Confidence 443 479999974321 13456788999999 999864
No 327
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.12 E-value=0.017 Score=50.21 Aligned_cols=103 Identities=17% Similarity=0.139 Sum_probs=60.5
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
+++|++||-+|+|+ |.++..+++..+ ..+|+++|.++- . .--++..+ -|..+.+..+.+.+...
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~i~~~t~ 279 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAG---------ASKVILSEPSEVRRNLAKELGADHV--IDPTKENFVEAVLDYTN 279 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCHHHHHHHHHHTCSEE--ECTTTSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHcCCCEE--EcCCCCCHHHHHHHHhC
Confidence 57899999999876 666666776653 348999998761 0 00123221 23334445556666666
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+..+|+|+-... . ... .....+..+.+.++++|++++.-
T Consensus 280 g~g~D~vid~~g-----~----~~~---~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 280 GLGAKLFLEATG-----V----PQL---VWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp TCCCSEEEECSS-----C----HHH---HHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCCCCEEEECCC-----C----cHH---HHHHHHHHHHhccCCCcEEEEeC
Confidence 668999997332 1 100 11122222234559999998743
No 328
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.12 E-value=0.016 Score=49.62 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=58.8
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--CC--CCCe-EEecCCCCC--hhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--PI--DGAV-VLSKCDFTQ--PDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--~~--~~~~-~~~~~D~~~--~~~~~~i~~ 130 (229)
+++|++||-+|+|+ |.++..+++..+ ..+|+++|.++-. .. -++. ++ |..+ .+..+.+.+
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~G---------a~~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~v~~ 255 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAG---------ASRIIGVDINKDKFARAKEFGATECI---NPQDFSKPIQEVLIE 255 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT---------CSEEEEECSCGGGHHHHHHHTCSEEE---CGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHHHHcCCceEe---ccccccccHHHHHHH
Confidence 56899999999876 666666777654 2389999987621 00 1222 22 2221 123344544
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~ 183 (229)
... +.+|+|+.... . ...+..+.+.|+++ |++++.
T Consensus 256 ~~~-~g~D~vid~~g-----~------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 256 MTD-GGVDYSFECIG-----N------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HTT-SCBSEEEECSC-----C------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HhC-CCCCEEEECCC-----c------------HHHHHHHHHhhccCCcEEEEE
Confidence 443 48999997332 1 13456788999999 999864
No 329
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.09 E-value=0.0039 Score=53.85 Aligned_cols=97 Identities=16% Similarity=0.141 Sum_probs=60.2
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCe-EEecCCCC---ChhHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAV-VLSKCDFT---QPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~-~~~~~D~~---~~~~~~~i~ 129 (229)
+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++- . .--++. ++ |.. +.+..+.+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~v~ 260 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG---------AENVIVIAGSPNRLKLAEEIGADLTL---NRRETSVEERRKAIM 260 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT---------BSEEEEEESCHHHHHHHHHTTCSEEE---ETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC---------CceEEEEcCCHHHHHHHHHcCCcEEE---eccccCcchHHHHHH
Confidence 56899999999766 556666666542 248999998751 1 011222 22 222 334444555
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+...+..+|+|+-... .. ..+..+.+.|+++|++++.-
T Consensus 261 ~~~~g~g~Dvvid~~g-----~~------------~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 261 DITHGRGADFILEATG-----DS------------RALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHTTTSCEEEEEECSS-----CT------------THHHHHHHHEEEEEEEEECC
T ss_pred HHhCCCCCcEEEECCC-----CH------------HHHHHHHHHHhcCCEEEEEe
Confidence 5555557999997432 10 23556888999999998643
No 330
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.07 E-value=0.0043 Score=53.40 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=60.6
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHH---
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVT--- 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~--- 130 (229)
+++|++||-+|+|+ |.++..+++..| ..+|+++|.++- . .--++... -|..+.+..+.+.+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~G---------a~~Vi~~~~~~~~~~~a~~lGa~~v--i~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAG---------ATTVILSTRQATKRRLAEEVGATAT--VDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCHHHHHHHHHHTCSEE--ECTTSSCHHHHHHSTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHcCCCEE--ECCCCcCHHHHHHhhhh
Confidence 57899999999876 666777777653 348999998861 0 00123221 23334344444443
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.. ++.+|+|+-... . ...+..+.+.|++||++++.-
T Consensus 249 ~~-~gg~Dvvid~~G-----~------------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 249 LV-PGGVDVVIECAG-----V------------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp SS-TTCEEEEEECSC-----C------------HHHHHHHHHHEEEEEEEEECS
T ss_pred cc-CCCCCEEEECCC-----C------------HHHHHHHHHHhccCCEEEEEe
Confidence 22 347999997331 1 134667888999999998743
No 331
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.05 E-value=0.0051 Score=51.35 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=43.7
Q ss_pred CCeEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCC-Cc----c----cHHHHHHHHHHHHHHHHHcccCCCEE
Q psy1489 110 GAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGM-RE----M----DHDLITQLAIAVIRFAVTYSKPGADC 180 (229)
Q Consensus 110 ~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~-~~----~----d~~~~~~~~~~~l~~~~~~LkpgG~~ 180 (229)
...++ ++|..+ ....+++++||+|++|++...... .. . ++...+.....++.++.++|+|||.+
T Consensus 21 ~~~i~-~gD~~~------~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 21 VHRLH-VGDARE------VLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp CEEEE-ESCHHH------HHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred CCEEE-ECcHHH------HHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 45677 888654 223356789999999987532110 00 0 01112233457788999999999999
Q ss_pred EEeec
Q psy1489 181 LIKIW 185 (229)
Q Consensus 181 v~~~~ 185 (229)
++.+-
T Consensus 94 ~i~~~ 98 (297)
T 2zig_A 94 VIVVG 98 (297)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88764
No 332
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.04 E-value=0.0051 Score=51.94 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=60.0
Q ss_pred cCCCCeeEeec-CCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCG-AAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlG-cGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.| +|+ |..+..+++..| .+|+++|.++- . .--++... .|..+.+..+.+.+..
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~~~ga~~~--~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKG----------AHTIAVASTDEKLKIAKEYGAEYL--INASKEDILRQVLKFT 213 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHTTCSEE--EETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHHcCCcEE--EeCCCchHHHHHHHHh
Confidence 57899999999 444 556666666543 58999998751 0 00122211 2333444555566656
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+.... . ..+..+.+.|++||++++.
T Consensus 214 ~~~g~D~vid~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 214 NGKGVDASFDSVG-----K-------------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp TTSCEEEEEECCG-----G-------------GGHHHHHHHEEEEEEEEEC
T ss_pred CCCCceEEEECCC-----h-------------HHHHHHHHHhccCCEEEEE
Confidence 5668999998442 1 1345578899999999874
No 333
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.99 E-value=0.03 Score=45.65 Aligned_cols=65 Identities=8% Similarity=0.083 Sum_probs=43.4
Q ss_pred eEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcc----cHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 112 VVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREM----DHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 112 ~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~----d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.++ ++|..+ ....+++++||+|+.|++.+... ... .+..........+.++.++|+|||.+++.+
T Consensus 6 ~l~-~gD~~~------~l~~l~~~~vdlI~~DPPY~~~~-~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 6 KIH-QMNCFD------FLDQVENKSVQLAVIDPPYNLSK-ADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SEE-ECCHHH------HHHHSCTTCEEEEEECCCCSSCS-SGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEE-echHHH------HHHhccccccCEEEECCCCCCCc-ccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 455 676443 22346678999999999864321 111 233344556778888999999999998865
No 334
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.97 E-value=0.012 Score=49.89 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=58.0
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
+++|++||-+|+|+ |..+..+++..+ .+|+++|.++- . .--++... .|..+.+..+.+.+..
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~~lGa~~~--~d~~~~~~~~~~~~~~- 228 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMG----------LNVVAVDIGDEKLELAKELGADLV--VNPLKEDAAKFMKEKV- 228 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTT----------CEEEEECSCHHHHHHHHHTTCSEE--ECTTTSCHHHHHHHHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHCCCCEE--ecCCCccHHHHHHHHh-
Confidence 57899999999965 445555555543 59999998751 1 01123221 2444434444454443
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+|+|+..... ...+..+.+.|+++|++++.
T Consensus 229 -~~~d~vid~~g~-----------------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 229 -GGVHAAVVTAVS-----------------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp -SSEEEEEESSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred -CCCCEEEECCCC-----------------HHHHHHHHHHhhcCCEEEEe
Confidence 479999974421 12456688899999998864
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.95 E-value=0.016 Score=49.73 Aligned_cols=95 Identities=15% Similarity=0.138 Sum_probs=58.2
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----CCCCCe-EEecCCCCC--hhHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----PIDGAV-VLSKCDFTQ--PDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----~~~~~~-~~~~~D~~~--~~~~~~i~~ 130 (229)
+++|++||-+|+|+ |..+..+++..+ ..+|+++|.++-. .--++. ++ |..+ .+..+.+.+
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~G---------a~~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~~~ 256 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAG---------AARIIGVDINKDKFAKAKEVGATECV---NPQDYKKPIQEVLTE 256 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT---------CSEEEEECSCGGGHHHHHHTTCSEEE---CGGGCSSCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC---------CCeEEEEcCCHHHHHHHHHhCCceEe---cccccchhHHHHHHH
Confidence 56899999999876 566666666653 2389999987611 001222 22 2221 223334444
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCC-CEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPG-ADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkpg-G~~v~~ 183 (229)
... +.+|+|+.... . ...+..+.+.|+++ |++++.
T Consensus 257 ~~~-~g~D~vid~~g-----~------------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 257 MSN-GGVDFSFEVIG-----R------------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HTT-SCBSEEEECSC-----C------------HHHHHHHHHHBCTTTCEEEEC
T ss_pred HhC-CCCcEEEECCC-----C------------HHHHHHHHHHhhcCCcEEEEe
Confidence 333 48999997432 1 13456688899999 999864
No 336
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.90 E-value=0.02 Score=48.12 Aligned_cols=120 Identities=20% Similarity=0.189 Sum_probs=68.3
Q ss_pred CCeeEeecCCCCchHHHHHH---HHhccCCCCCCCCc--EEEEEeCCCCCCCC-----------------------C--C
Q psy1489 62 GLKVLDCGAAPGSWSQVAVK---LVNSHGYDSKQPKG--LVLSVDKLPIYPID-----------------------G--A 111 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~---~~~~~~~~~~~~~~--~v~gvD~~~~~~~~-----------------------~--~ 111 (229)
.-+|||+|-|+|.......+ ..+ +.. +.+++|..++...+ + +
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~--------~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L 168 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVN--------PKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSL 168 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHC--------TTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEE
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhC--------CCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEE
Confidence 36899999999986544332 222 344 56788865532110 0 1
Q ss_pred eEEecCCCCChhHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecCCCChH
Q psy1489 112 VVLSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWDGRNRP 191 (229)
Q Consensus 112 ~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~~~~ 191 (229)
.+. .+|+.+ .+.+ +++..||+|+.|+.. +...+++- ...++..+.++++|||+|+. |+.. .
T Consensus 169 ~l~-~GDa~~-----~l~~-l~~~~~Da~flDgFs-P~kNPeLW-------s~e~f~~l~~~~~pgg~laT--Ytaa--g 229 (308)
T 3vyw_A 169 KVL-LGDARK-----RIKE-VENFKADAVFHDAFS-PYKNPELW-------TLDFLSLIKERIDEKGYWVS--YSSS--L 229 (308)
T ss_dssp EEE-ESCHHH-----HGGG-CCSCCEEEEEECCSC-TTTSGGGG-------SHHHHHHHHTTEEEEEEEEE--SCCC--H
T ss_pred EEE-echHHH-----HHhh-hcccceeEEEeCCCC-cccCcccC-------CHHHHHHHHHHhCCCcEEEE--EeCc--H
Confidence 122 344322 2222 445579999999842 11222211 23678889999999999975 5443 4
Q ss_pred HHHHHHHhhCCeeEEEc
Q psy1489 192 QLEESITRFYSQVKILK 208 (229)
Q Consensus 192 ~~~~~l~~~F~~v~~~k 208 (229)
.+..-|+..=-.|.-.+
T Consensus 230 ~VRR~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 230 SVRKSLLTLGFKVGSSR 246 (308)
T ss_dssp HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHCCCEEEecC
Confidence 56666777633455443
No 337
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=95.85 E-value=0.15 Score=40.56 Aligned_cols=114 Identities=16% Similarity=0.192 Sum_probs=69.4
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccEE
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVV 140 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V 140 (229)
.+++||-.|++ |+++..+++.+... ....|+.+|.++......+.++ ..|+++.+....+.+.+.....|++
T Consensus 3 ~~k~vlITGas-~gIG~~~a~~l~~~------~g~~v~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~id~l 74 (244)
T 4e4y_A 3 AMANYLVTGGS-KGIGKAVVELLLQN------KNHTVINIDIQQSFSAENLKFI-KADLTKQQDITNVLDIIKNVSFDGI 74 (244)
T ss_dssp CCEEEEEETTT-SHHHHHHHHHHTTS------TTEEEEEEESSCCCCCTTEEEE-ECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred CCCeEEEeCCC-ChHHHHHHHHHHhc------CCcEEEEeccccccccccceEE-ecCcCCHHHHHHHHHHHHhCCCCEE
Confidence 35677877755 66778888776410 1247888898774345667888 9999998766555555555689999
Q ss_pred EeCCCCCCC-CCCcccH--HH-HHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 141 LSDMAPNAT-GMREMDH--DL-ITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 141 ~sd~~~~~~-g~~~~d~--~~-~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
+.++..... ...+.+. +. .++ -....++.+...++++|+++.
T Consensus 75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~ 124 (244)
T 4e4y_A 75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVF 124 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEE
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEE
Confidence 998764221 1222221 11 111 111344555566777788765
No 338
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.84 E-value=0.012 Score=49.73 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=60.1
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--CC---CCCCCeEEecCCCCChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--IY---PIDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~~---~~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
+++|++||-.|+ |+ |..+..+++..| .+|+++|.++ .. .--++... .|..+.+..+.+.+.
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~ 214 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKG----------CRVVGIAGGAEKCRFLVEELGFDGA--IDYKNEDLAAGLKRE 214 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHTTCCSEE--EETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHHHcCCCEE--EECCCHHHHHHHHHh
Confidence 578999999998 33 566666666543 5999999875 11 11122221 234444455555554
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
. ++.+|+|+.... . ..+..+.+.|+++|++++.
T Consensus 215 ~-~~~~d~vi~~~g----------~--------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 215 C-PKGIDVFFDNVG----------G--------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp C-TTCEEEEEESSC----------H--------HHHHHHHTTEEEEEEEEEC
T ss_pred c-CCCceEEEECCC----------c--------chHHHHHHHHhhCCEEEEE
Confidence 4 467999998442 1 2456688899999999864
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.84 E-value=0.01 Score=50.35 Aligned_cols=95 Identities=18% Similarity=0.175 Sum_probs=58.6
Q ss_pred CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHHhCCC
Q psy1489 61 PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTILKDD 135 (229)
Q Consensus 61 ~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~~~~~ 135 (229)
+|++||-+|+|+ |..+..+++..+ ..+|+++|.++- ... -++..+ .|..+.+..+.+.+...+.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G---------a~~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~~~~~v~~~~~g~ 235 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG---------AYPVIVSEPSDFRRELAKKVGADYV--INPFEEDVVKEVMDITDGN 235 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT---------CCSEEEECSCHHHHHHHHHHTCSEE--ECTTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHhCCCEE--ECCCCcCHHHHHHHHcCCC
Confidence 899999999965 555556666543 228999998751 100 122211 2333444445555555455
Q ss_pred CccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 136 KLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 136 ~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+|+|+..... ...+..+.+.|+++|++++.
T Consensus 236 g~D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 236 GVDVFLEFSGA-----------------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp CEEEEEECSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 79999974321 13456688899999998864
No 340
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.82 E-value=0.021 Score=48.25 Aligned_cols=80 Identities=15% Similarity=0.014 Sum_probs=48.3
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCccc-HHHHHHHHHHHHHHHHHcccCCCEEEEeecCCC-------ChHHHHHHHHhh-
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMD-HDLITQLAIAVIRFAVTYSKPGADCLIKIWDGR-------NRPQLEESITRF- 200 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d-~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~~~-------~~~~~~~~l~~~- 200 (229)
..+++++||+|+.|++.+... ...+ +..........+.++.++|+|||.+++.+.... ....+...+...
T Consensus 52 ~~l~~~svDlI~tDPPY~~~~-d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~~~l~~l~~~i~~~G 130 (319)
T 1eg2_A 52 AKLPDDSVQLIICDPPYNIML-ADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLISIISHMRQNS 130 (319)
T ss_dssp HTSCTTCEEEEEECCCSBCCG-GGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCCHHHHHHHHHHHC
T ss_pred HhCccCCcCEEEECCCCCCCC-CCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccccccccccHHHHHHHHhCcc
Confidence 346778999999999864320 0000 111233456778889999999999998764321 124455555433
Q ss_pred -C---CeeEEEcCC
Q psy1489 201 -Y---SQVKILKPP 210 (229)
Q Consensus 201 -F---~~v~~~kp~ 210 (229)
| ..+.+.|+.
T Consensus 131 ~~~~~~~IIW~K~~ 144 (319)
T 1eg2_A 131 KMLLANLIIWNYPN 144 (319)
T ss_dssp CCEEEEEEEEECSC
T ss_pred cceeEEEEEEECCC
Confidence 3 345566764
No 341
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.76 E-value=0.01 Score=50.40 Aligned_cols=92 Identities=22% Similarity=0.165 Sum_probs=59.6
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCe-EEecCCCCChhHHHHHHH
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAV-VLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~-~~~~~D~~~~~~~~~i~~ 130 (229)
+++|++||-.|+ |+ |..+..+++..| .+|++++.++- .. -++. ++ .. . .+..+.+.+
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~G----------a~Vi~~~~~~~-~~~~~~~~ga~~v~-~~--~-~~~~~~v~~ 221 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMG----------AKVIAVVNRTA-ATEFVKSVGADIVL-PL--E-EGWAKAVRE 221 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT----------CEEEEEESSGG-GHHHHHHHTCSEEE-ES--S-TTHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC----------CEEEEEeCCHH-HHHHHHhcCCcEEe-cC--c-hhHHHHHHH
Confidence 578999999998 44 666677777654 59999998761 11 1222 23 22 2 334455666
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
...+..+|+|+.... . ..+..+.+.|+++|++++.
T Consensus 222 ~~~~~g~Dvvid~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 222 ATGGAGVDMVVDPIG-----G-------------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp HTTTSCEEEEEESCC--------------------CHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCceEEEECCc-----h-------------hHHHHHHHhhcCCCEEEEE
Confidence 555668999997442 1 1245578899999999864
No 342
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=95.75 E-value=0.21 Score=48.50 Aligned_cols=93 Identities=19% Similarity=0.312 Sum_probs=65.8
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee-cCCCC-hHHHHHHHHhhCCeeEEEc
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI-WDGRN-RPQLEESITRFYSQVKILK 208 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~-~~~~~-~~~~~~~l~~~F~~v~~~k 208 (229)
.++.+.|.+|.||.---..|..+.+. .-+.....+..+..+..+||.+++|+ |.... +..+...+..+|..+.+.|
T Consensus 569 p~pTGtf~fVYSDVDQV~d~~~Dl~A--s~r~~~~~l~~~l~~ts~GG~~v~KiNFPT~~vw~~if~~~~~~~~~~~i~K 646 (1299)
T 3iyl_W 569 AVPTGTFGLVYADLDQVEDAGTDMPA--ANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHATTLHLVK 646 (1299)
T ss_dssp CCCCCCEEEEEECCCCC-----CCHH--HHHHHHHHHHHHHHHEEEEEEEEEEESCCCTTHHHHHHHHTTTTCSCEEEEE
T ss_pred cCCCCceEEEEecchhhccCCcchhh--hhHHHHHHHHHHHHhhcCCceEEEEEcCCchHHHHHHHHHhcchhheeeeec
Confidence 37789999999987432223233322 22345577888999999999999998 54443 3455566677799999999
Q ss_pred CCCCCCCCceEEEEeccCC
Q psy1489 209 PPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 209 p~~sr~~s~E~Y~v~~~~~ 227 (229)
|-- .+|.|.|+|+-++.
T Consensus 647 Pli--~NnvEvf~v~~~r~ 663 (1299)
T 3iyl_W 647 PTI--VNSSEVFLVFGGRQ 663 (1299)
T ss_dssp CCS--SSCCCEEEEESCCC
T ss_pred cee--ecceEEEEEEeeec
Confidence 844 68999999988764
No 343
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.69 E-value=0.035 Score=46.84 Aligned_cols=98 Identities=13% Similarity=0.044 Sum_probs=60.0
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCC-eEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGA-VVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~-~~~~~~D~~~~~~~~~i~~~~ 132 (229)
.++|++||-.|+|+ |.++..+++..+ ...++++|.++- . .--++ ..+ |..+.+..+.+...-
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G---------~~~vi~~~~~~~k~~~a~~lGa~~~i---~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG---------AKSVTAIDISSEKLALAKSFGAMQTF---NSSEMSAPQMQSVLR 225 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT---------CSEEEEEESCHHHHHHHHHTTCSEEE---ETTTSCHHHHHHHHG
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC---------CcEEEEEechHHHHHHHHHcCCeEEE---eCCCCCHHHHHHhhc
Confidence 56899999999987 455666666653 357789998861 1 11122 233 333333333343334
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
....+|+|+.... . ...+..+.+.|++||++++.-.
T Consensus 226 ~~~g~d~v~d~~G-----~------------~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 226 ELRFNQLILETAG-----V------------PQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp GGCSSEEEEECSC-----S------------HHHHHHHHHHCCTTCEEEECCC
T ss_pred ccCCccccccccc-----c------------cchhhhhhheecCCeEEEEEec
Confidence 4567898886331 1 1346668889999999987543
No 344
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.54 E-value=0.017 Score=49.26 Aligned_cols=95 Identities=14% Similarity=0.195 Sum_probs=58.5
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CC--CCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YP--IDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~--~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.|+ |+ |..+..+++..| .+|+++|.++- .. --++... .|..+.+..+.+.+..
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~~~ga~~~--~d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYG----------LKILGTAGTEEGQKIVLQNGAHEV--FNHREVNYIDKIKKYV 235 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHTTCSEE--EETTSTTHHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCC----------CEEEEEeCChhHHHHHHHcCCCEE--EeCCCchHHHHHHHHc
Confidence 568999999997 32 444555555443 58999998751 10 0122221 2444444455565555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+.... . ..+..+.+.|+++|++++.
T Consensus 236 ~~~~~D~vi~~~G----------~--------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 236 GEKGIDIIIEMLA----------N--------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CTTCEEEEEESCH----------H--------HHHHHHHHHEEEEEEEEEC
T ss_pred CCCCcEEEEECCC----------h--------HHHHHHHHhccCCCEEEEE
Confidence 5567999998441 0 2345678899999999864
No 345
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.33 E-value=0.0053 Score=52.13 Aligned_cols=93 Identities=6% Similarity=-0.007 Sum_probs=55.5
Q ss_pred CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCe-EEecCCCCChhHHHHHHHHhCC
Q psy1489 61 PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAV-VLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 61 ~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~-~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
+|++||-+|+|+ |.++..+++... +..+|+++|.++- ... -++. ++ |..+. .+.+.+...+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~--------~Ga~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~--~~~~~~~~~g 236 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALM--------KNITIVGISRSKKHRDFALELGADYVS---EMKDA--ESLINKLTDG 236 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHC--------TTCEEEEECSCHHHHHHHHHHTCSEEE---CHHHH--HHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhc--------CCCEEEEEeCCHHHHHHHHHhCCCEEe---ccccc--hHHHHHhhcC
Confidence 899999999976 666677777661 1268999998751 001 1222 22 21110 1112222334
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+|+|+..... ...+..+.+.|+++|++++.
T Consensus 237 ~g~D~vid~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 237 LGASIAIDLVGT-----------------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp CCEEEEEESSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCccEEEECCCC-----------------hHHHHHHHHHhhcCCEEEEe
Confidence 479999974321 12456688899999999864
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.33 E-value=0.018 Score=48.70 Aligned_cols=95 Identities=19% Similarity=0.177 Sum_probs=58.5
Q ss_pred cCCCCeeEeecC-C-CCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGA-A-PGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGc-G-pG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.|+ | -|..+..+++..+ .+|+++|.++- ... -++... .|..+.+..+.+.+..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G----------~~Vi~~~~~~~~~~~~~~~ga~~~--~d~~~~~~~~~~~~~~ 231 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFG----------ARVIATAGSEDKLRRAKALGADET--VNYTHPDWPKEVRRLT 231 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHHTCSEE--EETTSTTHHHHHHHHT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHhcCCCEE--EcCCcccHHHHHHHHh
Confidence 568999999998 3 3555555665543 58999998751 101 122221 2444444444555555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
....+|+|+..... ..+..+.+.|+++|++++.
T Consensus 232 ~~~~~d~vi~~~g~------------------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 232 GGKGADKVVDHTGA------------------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TTTCEEEEEESSCS------------------SSHHHHHHHEEEEEEEEES
T ss_pred CCCCceEEEECCCH------------------HHHHHHHHhhccCCEEEEE
Confidence 45579999985531 1234577889999998864
No 347
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=95.28 E-value=0.091 Score=39.61 Aligned_cols=101 Identities=13% Similarity=0.065 Sum_probs=67.0
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCC---CCCCeEEecCCCCChhHHHHHHHHhCCCCc
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYP---IDGAVVLSKCDFTQPDIQDRLVTILKDDKL 137 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~---~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~ 137 (229)
..-|||||-|.|.---++.+.+ |...|+.+|..- ..+ .+.-.++ ++|+.+. .......+ +...
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~---------P~R~I~vfDR~~~~hp~~~P~~e~~i-lGdi~~t--L~~~~~r~-g~~a 107 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHV---------QGREIYVFERAVASHPDSTPPEAQLI-LGDIRET--LPATLERF-GATA 107 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHC---------CSSCEEEEESSCCCCGGGCCCGGGEE-ESCHHHH--HHHHHHHH-CSCE
T ss_pred CCceEEecCCCChhHHHHHHhC---------CCCcEEEEEeeeccCCCCCCchHhee-cccHHHH--HHHHHHhc-CCce
Confidence 3579999999999999999988 678999999753 111 2334567 8987662 22222234 6678
Q ss_pred cEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 138 DVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 138 D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
-++.+|... |.++ ........+-..+..+|.|||.++-
T Consensus 108 ~LaHaD~G~---g~~~----~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 108 SLVHADLGG---HNRE----KNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp EEEEECCCC---SCHH----HHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEeecCC---CCcc----hhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 888898743 3322 2223333344567789999998875
No 348
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.16 E-value=0.018 Score=48.41 Aligned_cols=95 Identities=15% Similarity=0.140 Sum_probs=58.2
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.|+ |. |..+..+++..+ .+|+++|.++- ... -++... .|..+.+..+.+.+..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G----------~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALG----------AKLIGTVGTAQKAQSALKAGAWQV--INYREEDLVERLKEIT 205 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHT----------CEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHcCCCEE--EECCCccHHHHHHHHh
Confidence 568999999994 33 545555555543 58999998751 100 122221 2444444445555555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
....+|+|+..... ..+..+.+.|+++|++++.
T Consensus 206 ~~~~~D~vi~~~g~------------------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 206 GGKKVRVVYDSVGR------------------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp TTCCEEEEEECSCG------------------GGHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCch------------------HHHHHHHHHhcCCCEEEEE
Confidence 55679999985421 1345678899999999864
No 349
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.14 E-value=0.058 Score=46.10 Aligned_cols=93 Identities=14% Similarity=0.068 Sum_probs=58.8
Q ss_pred CCCeeEeec-CCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 61 PGLKVLDCG-AAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 61 ~g~~VLDlG-cGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
+|++||-.| +|+ |.++..+++..+ ..+|+++|.++- . .--++..+ -|..+ +..+.+.+. ..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~---------g~~Vi~~~~~~~~~~~~~~lGad~v--i~~~~-~~~~~v~~~-~~ 237 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT---------DLTVIATASRPETQEWVKSLGAHHV--IDHSK-PLAAEVAAL-GL 237 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC---------CSEEEEECSSHHHHHHHHHTTCSEE--ECTTS-CHHHHHHTT-CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc---------CCEEEEEeCCHHHHHHHHHcCCCEE--EeCCC-CHHHHHHHh-cC
Confidence 789999998 777 777777787642 369999998751 0 01123222 12222 233444443 55
Q ss_pred CCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 135 DKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 135 ~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.+|+|+.... . ...+..+.+.|+++|++++.
T Consensus 238 ~g~Dvvid~~g----------~-------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 238 GAPAFVFSTTH----------T-------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp CCEEEEEECSC----------H-------HHHHHHHHHHSCTTCEEEEC
T ss_pred CCceEEEECCC----------c-------hhhHHHHHHHhcCCCEEEEE
Confidence 68999997331 0 13566788899999999864
No 350
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.08 E-value=0.022 Score=48.28 Aligned_cols=95 Identities=24% Similarity=0.199 Sum_probs=57.8
Q ss_pred cCCCCeeEeecCC--CCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--C--CCCCeEEecCCCC-ChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGAA--PGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--P--IDGAVVLSKCDFT-QPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGcG--pG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--~--~~~~~~~~~~D~~-~~~~~~~i~~~ 131 (229)
+++|++||.+|++ -|..+..+++..+ .+|+++|.++-. . --++... .|.. +.+..+.+.+.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G----------a~V~~~~~~~~~~~~~~~~g~~~~--~d~~~~~~~~~~~~~~ 234 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMG----------YRVLGIDGGEGKEELFRSIGGEVF--IDFTKEKDIVGAVLKA 234 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT----------CEEEEEECSTTHHHHHHHTTCCEE--EETTTCSCHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC----------CcEEEEcCCHHHHHHHHHcCCceE--EecCccHhHHHHHHHH
Confidence 5689999999983 2444445555433 589999987611 0 0122222 2444 23334445544
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
... .+|+|+..... ...+..+.+.|+++|++++.
T Consensus 235 ~~~-~~D~vi~~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 235 TDG-GAHGVINVSVS-----------------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HTS-CEEEEEECSSC-----------------HHHHHHHTTSEEEEEEEEEC
T ss_pred hCC-CCCEEEECCCc-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 444 79999985421 13466788999999998864
No 351
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.04 E-value=0.019 Score=48.94 Aligned_cols=95 Identities=15% Similarity=0.083 Sum_probs=58.5
Q ss_pred cCCCCeeEeec-CCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCG-AAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlG-cGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.| +|+ |..+..+++..| .+|+++|.++- ... -++... .|..+.+....+.+..
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~~lGa~~~--~~~~~~~~~~~~~~~~ 232 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFG----------AEVYATAGSTGKCEACERLGAKRG--INYRSEDFAAVIKAET 232 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHhcCCCEE--EeCCchHHHHHHHHHh
Confidence 57899999994 454 666666666554 58999998751 000 122211 2333444444555555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
...+|+|+.... . ..+..+.+.|+++|++++.-
T Consensus 233 -~~g~Dvvid~~g-----~-------------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 233 -GQGVDIILDMIG-----A-------------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp -SSCEEEEEESCC-----G-------------GGHHHHHHTEEEEEEEEECC
T ss_pred -CCCceEEEECCC-----H-------------HHHHHHHHHhccCCEEEEEE
Confidence 668999998442 1 12455788999999988643
No 352
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=94.98 E-value=0.042 Score=52.14 Aligned_cols=94 Identities=17% Similarity=0.165 Sum_probs=62.0
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---CCCCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---YPIDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---~~~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
+++|++||-.|+ |+ |..+..+++..| .+|++++.++- ..+..-.++ |..+.+..+.+.+...
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~G----------a~V~~t~~~~k~~~l~lga~~v~---~~~~~~~~~~i~~~t~ 409 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLG----------AEVYATASEDKWQAVELSREHLA---SSRTCDFEQQFLGATG 409 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTT----------CCEEEECCGGGGGGSCSCGGGEE---CSSSSTHHHHHHHHSC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcC----------CEEEEEeChHHhhhhhcChhhee---ecCChhHHHHHHHHcC
Confidence 578999999995 55 777788888765 58999886541 111111222 3344455566666666
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+..+|+|+..... ..+..+.+.|+|+|+|+..
T Consensus 410 g~GvDvVld~~gg------------------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 410 GRGVDVVLNSLAG------------------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SSCCSEEEECCCT------------------TTTHHHHTSCTTCEEEEEC
T ss_pred CCCeEEEEECCCc------------------HHHHHHHHHhcCCCEEEEe
Confidence 7789999984321 1234588899999999863
No 353
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.97 E-value=0.026 Score=48.27 Aligned_cols=94 Identities=18% Similarity=0.144 Sum_probs=57.4
Q ss_pred cCCCCeeEeec-CCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCG-AAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlG-cGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.| +|+ |..+..+++..+ .+|+++|.++- ... -++..+ .|..+.+..+.+.+..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~G----------a~Vi~~~~~~~~~~~~~~~Ga~~~--~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAK----------CHVIGTCSSDEKSAFLKSLGCDRP--INYKTEPVGTVLKQEY 228 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHTTCSEE--EETTTSCHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCC----------CEEEEEECCHHHHHHHHHcCCcEE--EecCChhHHHHHHHhc
Confidence 57899999999 455 666666666654 58999998751 100 122221 1222333334444433
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+..+|+|+.... . ..+..+.+.|+++|++++.
T Consensus 229 -~~g~D~vid~~g-----~-------------~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 229 -PEGVDVVYESVG-----G-------------AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp -TTCEEEEEECSC-----T-------------HHHHHHHHHEEEEEEEEEC
T ss_pred -CCCCCEEEECCC-----H-------------HHHHHHHHHHhcCCEEEEE
Confidence 457999997432 1 2345678899999998864
No 354
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.85 E-value=0.015 Score=49.64 Aligned_cols=96 Identities=11% Similarity=0.102 Sum_probs=57.3
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.|+ |+ |..+..+++..+ .+|+++|.++- ... -++... .|..+.+..+.+.+..
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G----------a~Vi~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAG----------AIPLVTAGSQKKLQMAEKLGAAAG--FNYKKEDFSEATLKFT 227 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT----------CEEEEEESCHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHcCCcEE--EecCChHHHHHHHHHh
Confidence 568999999984 33 444444554433 58999998751 100 122221 2344444445555555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
....+|+|+..... ..+..+.+.|+++|++++.-
T Consensus 228 ~~~~~d~vi~~~G~------------------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 228 KGAGVNLILDCIGG------------------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TTSCEEEEEESSCG------------------GGHHHHHHHEEEEEEEEECC
T ss_pred cCCCceEEEECCCc------------------hHHHHHHHhccCCCEEEEEe
Confidence 55679999985421 12445778899999998743
No 355
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.82 E-value=0.024 Score=48.11 Aligned_cols=92 Identities=14% Similarity=0.078 Sum_probs=58.1
Q ss_pred cCCCCeeEeec-CCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCG-AAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlG-cGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+| +|+ |..+..+++..+ .+|+++ .++- . .--++..+ . .+.+..+.+.+..
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~G----------a~Vi~~-~~~~~~~~~~~lGa~~i-~---~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARG----------ARVFAT-ARGSDLEYVRDLGATPI-D---ASREPEDYAAEHT 212 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT----------CEEEEE-ECHHHHHHHHHHTSEEE-E---TTSCHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCC----------CEEEEE-eCHHHHHHHHHcCCCEe-c---cCCCHHHHHHHHh
Confidence 56899999999 455 666677776654 589988 5541 0 00133334 2 2333444455555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+..+|+|+..... ..+..+.+.|+++|++++.
T Consensus 213 ~~~g~D~vid~~g~------------------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 213 AGQGFDLVYDTLGG------------------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TTSCEEEEEESSCT------------------HHHHHHHHHEEEEEEEEES
T ss_pred cCCCceEEEECCCc------------------HHHHHHHHHHhcCCeEEEE
Confidence 66789999974321 1355678889999999864
No 356
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.64 E-value=0.034 Score=46.12 Aligned_cols=111 Identities=9% Similarity=-0.030 Sum_probs=64.5
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---------CCCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---------YPIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---------~~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+..+||+=+|+|.++..++.. ..+++.+|.++- ....+++++ +.|... .+....
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-----------~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~-~~D~~~-----~L~~l~ 154 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-----------QDRLYLCELHPTEYNFLLKLPHFNKKVYVN-HTDGVS-----KLNALL 154 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-----------TSEEEEECCSHHHHHHHTTSCCTTSCEEEE-CSCHHH-----HHHHHC
T ss_pred CCCceeEeCCcHHHHHHHcCC-----------CCeEEEEeCCHHHHHHHHHHhCcCCcEEEE-eCcHHH-----HHHHhc
Confidence 567999999999999887652 268999999861 122356677 666332 233333
Q ss_pred C-CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee--cCCCChHHHHHHHH
Q psy1489 133 K-DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI--WDGRNRPQLEESIT 198 (229)
Q Consensus 133 ~-~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~--~~~~~~~~~~~~l~ 198 (229)
+ ..+||+|+.|++.... +.+ ......+.. ...+.|+|.+++=- ........+.+.+.
T Consensus 155 ~~~~~fdLVfiDPPYe~k-----~~~---~~vl~~L~~-~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~ 214 (283)
T 2oo3_A 155 PPPEKRGLIFIDPSYERK-----EEY---KEIPYAIKN-AYSKFSTGLYCVWYPVVNKAWTEQFLRKMR 214 (283)
T ss_dssp SCTTSCEEEEECCCCCST-----THH---HHHHHHHHH-HHHHCTTSEEEEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCccEEEECCCCCCC-----cHH---HHHHHHHHH-hCccCCCeEEEEEEeccchHHHHHHHHHHH
Confidence 3 3479999999975211 111 111122222 23567899887521 11223455555554
No 357
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.64 E-value=0.02 Score=48.21 Aligned_cols=94 Identities=17% Similarity=0.127 Sum_probs=56.6
Q ss_pred cCCCCeeEeecCCC--CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCC-hhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP--GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQ-PDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGcGp--G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~-~~~~~~i~~~ 131 (229)
+++|++||..|++. |..+..++...| .+|+++|.++- ... -++.. ..|..+ .+....+.+.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G----------~~V~~~~~~~~~~~~~~~~g~~~--~~d~~~~~~~~~~~~~~ 210 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKG----------CKVVGAAGSDEKIAYLKQIGFDA--AFNYKTVNSLEEALKKA 210 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHTTCSE--EEETTSCSCHHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHhcCCcE--EEecCCHHHHHHHHHHH
Confidence 56899999999832 444444444433 58999998751 100 12222 124444 3344445444
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.. +.+|+|+.+.. . ..+..+.+.|++||++++.
T Consensus 211 ~~-~~~d~vi~~~g----------~--------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 211 SP-DGYDCYFDNVG----------G--------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CT-TCEEEEEESSC----------H--------HHHHHHHTTEEEEEEEEEC
T ss_pred hC-CCCeEEEECCC----------h--------HHHHHHHHHHhcCCEEEEE
Confidence 33 57999998552 1 1356688999999999864
No 358
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.59 E-value=0.02 Score=46.79 Aligned_cols=34 Identities=32% Similarity=0.356 Sum_probs=28.9
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP 104 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~ 104 (229)
.+|+.|||..||+|..+..+.+. + .+++|+|+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~-g----------r~~ig~e~~~ 244 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL-G----------RNFIGCDMNA 244 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT-T----------CEEEEEESCH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-C----------CeEEEEeCCH
Confidence 57899999999999998886654 3 5899999987
No 359
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=94.59 E-value=0.4 Score=37.99 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=63.6
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHH----HhCCCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVT----ILKDDK 136 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~----~~~~~~ 136 (229)
.+++||-.|+ +|+++..+++.+.. ...+|+.+|.++........++ ..|+++.+....+.+ .+..+.
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~~~~~~g~ 76 (241)
T 1dhr_A 6 EARRVLVYGG-RGALGSRCVQAFRA-------RNWWVASIDVVENEEASASVIV-KMTDSFTEQADQVTAEVGKLLGDQK 76 (241)
T ss_dssp CCCEEEEETT-TSHHHHHHHHHHHT-------TTCEEEEEESSCCTTSSEEEEC-CCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHh-------CCCEEEEEeCChhhccCCcEEE-EcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4677887774 56778888877642 2358999998762222234566 899998764433322 221147
Q ss_pred ccEEEeCCCCCCCC-C-Cccc--HH-HHHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 137 LDVVLSDMAPNATG-M-REMD--HD-LITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 137 ~D~V~sd~~~~~~g-~-~~~d--~~-~~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
+|+++.++.....+ . .+.+ .+ ..++ -....++.+...++++|+++.
T Consensus 77 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~ 131 (241)
T 1dhr_A 77 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTL 131 (241)
T ss_dssp EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEE
Confidence 99999987642211 1 1111 11 1111 112344555666666788775
No 360
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.57 E-value=0.014 Score=50.17 Aligned_cols=90 Identities=17% Similarity=0.119 Sum_probs=54.9
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+|+|+ |.++..+++..+ .+|+++|.++- .. -++..+ -|..+.+. +.. +
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~G----------a~Vi~~~~~~~-~~~~a~~lGa~~v--i~~~~~~~---~~~-~ 254 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMG----------AHVVAFTTSEA-KREAAKALGADEV--VNSRNADE---MAA-H 254 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT----------CEEEEEESSGG-GHHHHHHHTCSEE--EETTCHHH---HHT-T
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC----------CEEEEEeCCHH-HHHHHHHcCCcEE--eccccHHH---HHH-h
Confidence 57899999999876 666666676654 57999998761 11 122211 12333321 222 2
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
. ..+|+|+.... .. ..+..+.+.|+++|++++.
T Consensus 255 ~-~g~Dvvid~~g-----~~------------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 255 L-KSFDFILNTVA-----AP------------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp T-TCEEEEEECCS-----SC------------CCHHHHHTTEEEEEEEEEC
T ss_pred h-cCCCEEEECCC-----CH------------HHHHHHHHHhccCCEEEEe
Confidence 2 47999997432 11 1244578899999998864
No 361
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.49 E-value=0.026 Score=48.12 Aligned_cols=94 Identities=12% Similarity=0.060 Sum_probs=55.9
Q ss_pred cCCC------CeeEeecCCC-CchH-HHHH-HHHhccCCCCCCCCcEEEEEeCCCCC--CC-----CCCeEEecCCCCCh
Q psy1489 59 LRPG------LKVLDCGAAP-GSWS-QVAV-KLVNSHGYDSKQPKGLVLSVDKLPIY--PI-----DGAVVLSKCDFTQP 122 (229)
Q Consensus 59 ~~~g------~~VLDlGcGp-G~~s-~~la-~~~~~~~~~~~~~~~~v~gvD~~~~~--~~-----~~~~~~~~~D~~~~ 122 (229)
+++| ++||-+|+|+ |.++ ..++ +..+ ..+|+++|.++-. .. -++.. . |..+.
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~G---------a~~Vi~~~~~~~~~~~~~~~~~lGa~~--v-~~~~~ 231 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKG---------YENLYCLGRRDRPDPTIDIIEELDATY--V-DSRQT 231 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTC---------CCEEEEEECCCSSCHHHHHHHHTTCEE--E-ETTTS
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcC---------CcEEEEEeCCcccHHHHHHHHHcCCcc--c-CCCcc
Confidence 4578 9999999855 4444 4555 4432 2249999987620 11 13332 2 33333
Q ss_pred hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 123 DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 123 ~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
+..+ +.+. .+ .+|+|+-.. |. ...+..+.+.|+++|++++.-
T Consensus 232 ~~~~-i~~~-~g-g~Dvvid~~-----g~------------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 232 PVED-VPDV-YE-QMDFIYEAT-----GF------------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CGGG-HHHH-SC-CEEEEEECS-----CC------------HHHHHHHHHHEEEEEEEEECC
T ss_pred CHHH-HHHh-CC-CCCEEEECC-----CC------------hHHHHHHHHHHhcCCEEEEEe
Confidence 3333 4444 34 899999733 21 124566888999999998743
No 362
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.43 E-value=0.048 Score=46.03 Aligned_cols=93 Identities=11% Similarity=0.156 Sum_probs=56.6
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--C---C-CCCCCeEEecCCCCCh-hHHHHHH
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--I---Y-PIDGAVVLSKCDFTQP-DIQDRLV 129 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~---~-~~~~~~~~~~~D~~~~-~~~~~i~ 129 (229)
+++|++||-.|+ |+ |..+..+++..| .+|+++|.++ . . .+ ++... .|..+. +....+.
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G----------~~V~~~~~~~~~~~~~~~~~-g~~~~--~d~~~~~~~~~~~~ 219 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMG----------CYVVGSAGSKEKVDLLKTKF-GFDDA--FNYKEESDLTAALK 219 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHTS-CCSEE--EETTSCSCSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHHHc-CCceE--EecCCHHHHHHHHH
Confidence 568999999997 33 555555555543 5899999875 1 1 12 23221 233321 2333344
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
... ++.+|+|+.... . ..+..+.+.|++||++++.
T Consensus 220 ~~~-~~~~d~vi~~~g----------~--------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 220 RCF-PNGIDIYFENVG----------G--------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHC-TTCEEEEEESSC----------H--------HHHHHHHTTEEEEEEEEEC
T ss_pred HHh-CCCCcEEEECCC----------H--------HHHHHHHHHHhcCCEEEEE
Confidence 433 357999998542 1 2456688899999999863
No 363
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.40 E-value=0.038 Score=46.79 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=58.3
Q ss_pred cCCCCeeEeecCCC--CchHHHHHHHH-hccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP--GSWSQVAVKLV-NSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGcGp--G~~s~~la~~~-~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
+++|++||-.|+|. |..+..+++.. + .+|+++|.++- ... -++... .|..+.+..+.+.+.
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~G----------a~Vi~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSG----------ATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRI 235 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTC----------CEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCC----------CeEEEEcCCHHHHHHHHHhCCCEE--ecCCCccHHHHHHHH
Confidence 56899999999973 44555555554 4 58999998751 101 122211 233333333344444
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
...+.+|+|+..... ...+..+.+.|+++|++++.
T Consensus 236 ~~~~~~d~vi~~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS-----------------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TTTSCEEEEEESCCC-----------------HHHHTTGGGGEEEEEEEEEC
T ss_pred hcCCCceEEEECCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 332479999985431 12456688999999999874
No 364
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.31 E-value=0.082 Score=44.73 Aligned_cols=90 Identities=19% Similarity=0.125 Sum_probs=56.4
Q ss_pred CCCeeEee-cCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCe-EEecCCCCChhHHHHHHHHhC
Q psy1489 61 PGLKVLDC-GAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAV-VLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 61 ~g~~VLDl-GcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~-~~~~~D~~~~~~~~~i~~~~~ 133 (229)
+|++||-. |+|+ |.++..+++..| .+|+++|.++- ... -++. ++ |..+ +..+.+.+. .
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G----------a~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~-~~~~~~~~~-~ 214 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG----------LRVITTASRNETIEWTKKMGADIVL---NHKE-SLLNQFKTQ-G 214 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT----------CEEEEECCSHHHHHHHHHHTCSEEE---CTTS-CHHHHHHHH-T
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHhcCCcEEE---ECCc-cHHHHHHHh-C
Confidence 79999999 5666 666667776653 59999998751 000 1222 22 2222 234445544 5
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
...+|+|+.... . ...+..+.+.|+++|+++.
T Consensus 215 ~~g~Dvv~d~~g----------~-------~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 215 IELVDYVFCTFN----------T-------DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp CCCEEEEEESSC----------H-------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCccEEEECCC----------c-------hHHHHHHHHHhccCCEEEE
Confidence 668999997331 1 1345668889999999975
No 365
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.27 E-value=0.031 Score=47.38 Aligned_cols=86 Identities=17% Similarity=0.114 Sum_probs=55.1
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+|+|+ |.++..+++..+ .+|+++|.++- .. -++..+ . .+.+ .+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G----------a~Vi~~~~~~~-~~~~~~~lGa~~v-~---~~~~-------~~ 231 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG----------AEVSVFARNEH-KKQDALSMGVKHF-Y---TDPK-------QC 231 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT----------CEEEEECSSST-THHHHHHTTCSEE-E---SSGG-------GC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC----------CeEEEEeCCHH-HHHHHHhcCCCee-c---CCHH-------HH
Confidence 57899999999876 666777777654 58999998872 11 133333 2 1211 12
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.. .+|+|+.... .. ..+..+.+.|+++|++++.-
T Consensus 232 ~~-~~D~vid~~g-----~~------------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 232 KE-ELDFIISTIP-----TH------------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp CS-CEEEEEECCC-----SC------------CCHHHHHTTEEEEEEEEECC
T ss_pred hc-CCCEEEECCC-----cH------------HHHHHHHHHHhcCCEEEEEC
Confidence 22 7999996332 11 12455888999999998753
No 366
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.23 E-value=0.41 Score=37.77 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=47.8
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHH----HhCCCCc
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVT----ILKDDKL 137 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~----~~~~~~~ 137 (229)
+++||-.|+ +|+++..+++.+.. ...+|+.+|.++........++ ..|+++.+....+.+ .+..+.+
T Consensus 3 ~k~vlITGa-s~gIG~~~a~~l~~-------~G~~V~~~~r~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~g~i 73 (236)
T 1ooe_A 3 SGKVIVYGG-KGALGSAILEFFKK-------NGYTVLNIDLSANDQADSNILV-DGNKNWTEQEQSILEQTASSLQGSQV 73 (236)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHHH-------TTEEEEEEESSCCTTSSEEEEC-CTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECC-CcHHHHHHHHHHHH-------CCCEEEEEecCccccccccEEE-eCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 456777775 56677777776642 2358999998762222234566 899998764433322 2222579
Q ss_pred cEEEeCCCC
Q psy1489 138 DVVLSDMAP 146 (229)
Q Consensus 138 D~V~sd~~~ 146 (229)
|+|+.++..
T Consensus 74 d~lv~~Ag~ 82 (236)
T 1ooe_A 74 DGVFCVAGG 82 (236)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCcc
Confidence 999998764
No 367
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.21 E-value=0.02 Score=50.59 Aligned_cols=97 Identities=19% Similarity=0.259 Sum_probs=58.7
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCe-EEe--cCCC--------CC
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAV-VLS--KCDF--------TQ 121 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~-~~~--~~D~--------~~ 121 (229)
+++|++||-+|+ |+ |.++..+++..| .+|++++.++- ... -++. ++. ..|+ .+
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~G----------a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~ 295 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGG----------ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQD 295 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC----------CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccc
Confidence 578999999998 65 667777777654 58888887641 000 1222 220 1111 11
Q ss_pred h----hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 122 P----DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 122 ~----~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
. ...+.+.+...+..+|+|+-.. | . ..+..+.+.|++||++++.
T Consensus 296 ~~~~~~~~~~i~~~t~g~g~Dvvid~~-----G-----~--------~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 296 PKEWKRFGKRIRELTGGEDIDIVFEHP-----G-----R--------ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEEECS-----C-----H--------HHHHHHHHHEEEEEEEEES
T ss_pred hHHHHHHHHHHHHHhCCCCCcEEEEcC-----C-----c--------hhHHHHHHHhhCCcEEEEE
Confidence 1 1124455555567899999733 2 1 2456688899999999874
No 368
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.12 E-value=0.057 Score=45.38 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=57.9
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.|+ |+ |..+..+++..+ .+|+++|.++- ... -++... .|..+.+..+.+.+..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G----------~~Vi~~~~~~~~~~~~~~~g~~~~--~d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLG----------ATVIGTVSTEEKAETARKLGCHHT--INYSTQDFAEVVREIT 210 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHHcCCCEE--EECCCHHHHHHHHHHh
Confidence 568999999996 32 444445555443 58999998751 100 122221 2444444444555555
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
....+|+|+.... . ..+..+.+.|+++|++++.-
T Consensus 211 ~~~~~d~vi~~~g-----~-------------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSIG-----K-------------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECSC-----T-------------TTHHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEECCc-----H-------------HHHHHHHHhhccCCEEEEEe
Confidence 4567999997542 1 12455788999999988643
No 369
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.10 E-value=0.046 Score=46.43 Aligned_cols=95 Identities=11% Similarity=0.152 Sum_probs=57.4
Q ss_pred cCCC--CeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C---CCCCCeEEecCCCCChhHHHHHH
Q psy1489 59 LRPG--LKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y---PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g--~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~---~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
+++| ++||-.|+ |+ |..+..+++..| ..+|+++|.++- . ..-++... .|..+.+..+.+.
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~G---------a~~Vi~~~~~~~~~~~~~~~~g~~~~--~d~~~~~~~~~~~ 224 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLG---------CSRVVGICGTHEKCILLTSELGFDAA--INYKKDNVAEQLR 224 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTT---------CSEEEEEESCHHHHHHHHHTSCCSEE--EETTTSCHHHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCC---------CCeEEEEeCCHHHHHHHHHHcCCceE--EecCchHHHHHHH
Confidence 5678 99999998 32 444444555433 228999998751 1 10122221 2444444444555
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+...+ .+|+|+.... . ..+..+.+.|+++|++++.
T Consensus 225 ~~~~~-~~d~vi~~~G----------~--------~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 225 ESCPA-GVDVYFDNVG----------G--------NISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHCTT-CEEEEEESCC----------H--------HHHHHHHHTEEEEEEEEEC
T ss_pred HhcCC-CCCEEEECCC----------H--------HHHHHHHHHhccCcEEEEE
Confidence 54444 7999998542 1 2456688899999999864
No 370
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.00 E-value=0.14 Score=43.28 Aligned_cols=72 Identities=8% Similarity=0.021 Sum_probs=46.7
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCC-CcEE-EEEeCCCCC------CCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQP-KGLV-LSVDKLPIY------PIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~-~~~v-~gvD~~~~~------~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
...+|+||.||.|+++..+.+. | - ...| .++|+++.. ..+.. .+ .+|+.+.... .+.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~a-G--------~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~-~~DI~~~~~~-~i~--- 73 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERS-S--------ININATFIPFDINEIANKIYSKNFKEE-VQ-VKNLDSISIK-QIE--- 73 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHS-S--------CCCCEEEEEECCCHHHHHHHHHHHCCC-CB-CCCTTTCCHH-HHH---
T ss_pred CCCEEEEECCChhHHHHHHHHc-C--------CCceEEEEEEECCHHHHHHHHHHCCCC-cc-cCChhhcCHH-Hhc---
Confidence 3468999999999999886643 2 1 1256 799998721 12232 45 7898876432 222
Q ss_pred CCCCccEEEeCCCCCC
Q psy1489 133 KDDKLDVVLSDMAPNA 148 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~ 148 (229)
...+|+++...++..
T Consensus 74 -~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 74 -SLNCNTWFMSPPCQP 88 (327)
T ss_dssp -HTCCCEEEECCCCTT
T ss_pred -cCCCCEEEecCCccC
Confidence 236999999776543
No 371
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.00 E-value=0.21 Score=42.63 Aligned_cols=91 Identities=18% Similarity=0.281 Sum_probs=57.1
Q ss_pred CCCCeeEeecC-C-CCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCe-EEecCCCCChhHHHHHHHH
Q psy1489 60 RPGLKVLDCGA-A-PGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAV-VLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 60 ~~g~~VLDlGc-G-pG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~-~~~~~D~~~~~~~~~i~~~ 131 (229)
++|++||-+|+ | -|..+..+++..| .+|+++. ++ ... -++. ++ |..+.+..+.+.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G----------a~Vi~~~-~~-~~~~~~~~lGa~~vi---~~~~~~~~~~v~~~ 227 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG----------YIPIATC-SP-HNFDLAKSRGAEEVF---DYRAPNLAQTIRTY 227 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT----------CEEEEEE-CG-GGHHHHHHTTCSEEE---ETTSTTHHHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC----------CEEEEEe-CH-HHHHHHHHcCCcEEE---ECCCchHHHHHHHH
Confidence 78999999998 3 3777777777654 5888885 54 111 1232 33 33444455556655
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcc-cCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYS-KPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~L-kpgG~~v~~ 183 (229)
.++ .+|+|+-... . ...+..+.+.| ++||++++.
T Consensus 228 t~g-~~d~v~d~~g-----~------------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 228 TKN-NLRYALDCIT-----N------------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp TTT-CCCEEEESSC-----S------------HHHHHHHHHHSCTTCEEEEES
T ss_pred ccC-CccEEEECCC-----c------------hHHHHHHHHHhhcCCCEEEEE
Confidence 544 5999997332 1 13455677888 699998863
No 372
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=93.83 E-value=0.4 Score=38.71 Aligned_cols=78 Identities=15% Similarity=0.162 Sum_probs=52.1
Q ss_pred CCCeeEeecC-CCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-------CCC-CCCeEEecCCCCChhHHHHHHHH
Q psy1489 61 PGLKVLDCGA-APGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-------YPI-DGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 61 ~g~~VLDlGc-GpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-------~~~-~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
.++++|-.|+ |+|+++..+++.+.. ...+|+.+|.++. ..+ ..+.++ .+|+++.+....+.+.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~ 77 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQE-------QGAQLVLTGFDRLRLIQRITDRLPAKAPLL-ELDVQNEEHLASLAGR 77 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-------TTCEEEEEECSCHHHHHHHHTTSSSCCCEE-ECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHH-------CCCEEEEEecChHHHHHHHHHhcCCCceEE-EccCCCHHHHHHHHHH
Confidence 3678998998 588899888887642 2358988888751 111 246778 8999997654433322
Q ss_pred ----hC-CCCccEEEeCCCC
Q psy1489 132 ----LK-DDKLDVVLSDMAP 146 (229)
Q Consensus 132 ----~~-~~~~D~V~sd~~~ 146 (229)
+. ...+|+++.++..
T Consensus 78 ~~~~~g~~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 78 VTEAIGAGNKLDGVVHSIGF 97 (269)
T ss_dssp HHHHHCTTCCEEEEEECCCC
T ss_pred HHHHhCCCCCceEEEECCcc
Confidence 21 1279999998754
No 373
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.61 E-value=0.043 Score=45.47 Aligned_cols=87 Identities=22% Similarity=0.262 Sum_probs=53.5
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCeEEecCCCCC-hhHHHHHHH
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAVVLSKCDFTQ-PDIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~~~~~~D~~~-~~~~~~i~~ 130 (229)
+++|++||-+|+ |+ |..+..+++..+ .+|+++|.++- .. -++... .|..+ .+ +.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G----------a~Vi~~~~~~~-~~~~~~~~ga~~~--~~~~~~~~----~~~ 185 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG----------LRVLAAASRPE-KLALPLALGAEEA--ATYAEVPE----RAK 185 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT----------CEEEEEESSGG-GSHHHHHTTCSEE--EEGGGHHH----HHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC----------CEEEEEeCCHH-HHHHHHhcCCCEE--EECCcchh----HHH
Confidence 678999999997 44 556666666553 58999998761 11 122211 12222 22 222
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+ ..+|+|+. ... ..+..+.+.|+++|++++.
T Consensus 186 ~~--~~~d~vid-~g~------------------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 186 AW--GGLDLVLE-VRG------------------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp HT--TSEEEEEE-CSC------------------TTHHHHHTTEEEEEEEEEC
T ss_pred Hh--cCceEEEE-CCH------------------HHHHHHHHhhccCCEEEEE
Confidence 23 57999998 531 1235578899999998863
No 374
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.53 E-value=0.039 Score=47.05 Aligned_cols=91 Identities=16% Similarity=0.122 Sum_probs=53.6
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCC-----CCe-EEecCCCCCh-hHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPID-----GAV-VLSKCDFTQP-DIQDRLVT 130 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~-----~~~-~~~~~D~~~~-~~~~~i~~ 130 (229)
+++|++||-+|+|+ |.++..+++..+ .+|+++|.++- ..+ ++. ++ |..+. +.. +
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~G----------a~Vi~~~~~~~-~~~~~~~lGa~~v~---~~~~~~~~~----~ 238 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMG----------AETYVISRSSR-KREDAMKMGADHYI---ATLEEGDWG----E 238 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHT----------CEEEEEESSST-THHHHHHHTCSEEE---EGGGTSCHH----H
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC----------CEEEEEcCCHH-HHHHHHHcCCCEEE---cCcCchHHH----H
Confidence 57899999999966 666666776654 58999998762 111 222 22 11111 111 1
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+. +.+|+|+...... . . ..+..+.+.|++||++++.
T Consensus 239 ~~~-~~~D~vid~~g~~--~-~------------~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 239 KYF-DTFDLIVVCASSL--T-D------------IDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp HSC-SCEEEEEECCSCS--T-T------------CCTTTGGGGEEEEEEEEEC
T ss_pred Hhh-cCCCEEEECCCCC--c-H------------HHHHHHHHHhcCCCEEEEe
Confidence 122 4799999743210 0 0 1123477889999998763
No 375
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=93.41 E-value=0.081 Score=51.00 Aligned_cols=93 Identities=19% Similarity=0.334 Sum_probs=65.7
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee-cCCCC-hHHHHHHHHhhCCeeEEEc
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI-WDGRN-RPQLEESITRFYSQVKILK 208 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~-~~~~~-~~~~~~~l~~~F~~v~~~k 208 (229)
.++.+.|-+|.||.---.-|..+++. .-....+.+..+.....+||.+++|+ |.... +..+......+|....++|
T Consensus 565 p~pTGtf~fVYSDvDQV~dgg~Dl~A--asr~~~~~l~~~l~~tt~GG~~VvKiNFPT~~~W~~lf~~~~~~~~s~~lvK 642 (1289)
T 1ej6_A 565 PFPSGDYQFVYSDVDQVVDGHDDLSI--SSGLVESLLSSCMHATAPGGSFVVKINFPTRPVWHYIEQKILPNITSYMLIK 642 (1289)
T ss_dssp CCSCCCEEEEEECCCCCCSSSTTHHH--HHHHHHHHHHHHHHHEEEEEEEEEEESSCCHHHHHHHHHHTGGGEEEEEEEE
T ss_pred cCCCcceEEEEechhhhhcCCCcchh--hHHHHHHHHHHHHHhhccCceEEEEEcCCChHHHHHHHHhhccccceeeeec
Confidence 37788999999987543334444433 23455678889999999999999998 33221 2334444455688999999
Q ss_pred CCCCCCCCceEEEEeccCC
Q psy1489 209 PPSSRSHSAELFLLGRGFK 227 (229)
Q Consensus 209 p~~sr~~s~E~Y~v~~~~~ 227 (229)
|- -.+|.|.|+||-|+.
T Consensus 643 P~--IvNnvEvflv~~~r~ 659 (1289)
T 1ej6_A 643 PF--VTNNVELFFVAFGVH 659 (1289)
T ss_dssp EE--SSSSCCEEEEEEEES
T ss_pred ce--eecceEEEEEEEeee
Confidence 84 468999999998764
No 376
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=93.40 E-value=0.066 Score=46.73 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=31.5
Q ss_pred cCCCCeeEeecCCCCchHHHHHH-HHhccCCCCCCCCcEEEEEeCCC
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVK-LVNSHGYDSKQPKGLVLSVDKLP 104 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~-~~~~~~~~~~~~~~~v~gvD~~~ 104 (229)
++++..|+|+||+.|.++..++. ..+ +.++|+++|.+|
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~--------~~~~V~afEP~p 262 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKG--------KFERVWMIEPDR 262 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTS--------CCSEEEEECCCH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcC--------CCCEEEEEcCCH
Confidence 36889999999999999999884 432 237999999986
No 377
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=93.26 E-value=0.11 Score=44.06 Aligned_cols=91 Identities=18% Similarity=0.131 Sum_probs=52.7
Q ss_pred CC-CeeEee-cCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCe-EEecCCCCChhHHHHHHHH
Q psy1489 61 PG-LKVLDC-GAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAV-VLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 61 ~g-~~VLDl-GcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~-~~~~~D~~~~~~~~~i~~~ 131 (229)
+| .+||=. |+|+ |..+..+++..| .+|+++|.++- .. -++. ++ |..+.+..+.+.+.
T Consensus 163 ~g~~~vli~gg~g~vG~~a~qla~~~G----------a~Vi~~~~~~~-~~~~~~~~Ga~~~~---~~~~~~~~~~v~~~ 228 (349)
T 3pi7_A 163 EGEKAFVMTAGASQLCKLIIGLAKEEG----------FRPIVTVRRDE-QIALLKDIGAAHVL---NEKAPDFEATLREV 228 (349)
T ss_dssp HCCSEEEESSTTSHHHHHHHHHHHHHT----------CEEEEEESCGG-GHHHHHHHTCSEEE---ETTSTTHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC----------CEEEEEeCCHH-HHHHHHHcCCCEEE---ECCcHHHHHHHHHH
Confidence 45 556543 4444 555555666554 59999998761 11 1222 22 33344444555554
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+..+|+|+.... . ..+..+.+.|+++|++++.
T Consensus 229 ~~~~g~D~vid~~g----------~--------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 229 MKAEQPRIFLDAVT----------G--------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HHHHCCCEEEESSC----------H--------HHHHHHHHHSCTTCEEEEC
T ss_pred hcCCCCcEEEECCC----------C--------hhHHHHHhhhcCCCEEEEE
Confidence 44457999997432 1 1234577889999999874
No 378
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.23 E-value=2.1 Score=34.22 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=65.8
Q ss_pred CCCeeEeecCCCC-chHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-----------CCCCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPG-SWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-----------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG-~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-----------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.+.+||-.|++.+ +++..+++.+.. ...+|+.++.++-. .-..+.++ .+|+++.+....+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~ 77 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE-------AGARLIFTYAGERLEKSVHELAGTLDRNDSIIL-PCDVTNDAEIETC 77 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-------TTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEE-ECCCSSSHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-------CCCEEEEecCchHHHHHHHHHHHhcCCCCceEE-eCCCCCHHHHHHH
Confidence 4678898888743 566666665542 23588888876410 11257888 9999997654433
Q ss_pred HHHhCC--CCccEEEeCCCCCC-----CCCCcccHHHH---HH----HHHHHHHHHHHcccCCCEEEEe
Q psy1489 129 VTILKD--DKLDVVLSDMAPNA-----TGMREMDHDLI---TQ----LAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 129 ~~~~~~--~~~D~V~sd~~~~~-----~g~~~~d~~~~---~~----~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+.+.+ +.+|+++.++.... ....+.+.... +. -...+++.+...++++|++|.-
T Consensus 78 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 146 (266)
T 3oig_A 78 FASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTL 146 (266)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEE
Confidence 322211 36899999875421 11111221111 11 1123455667778888988753
No 379
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=93.16 E-value=1.8 Score=35.77 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=51.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CCCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YPIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
.+++||-.| |+|.++..+++.+.. ...+|++++.++. ..+.++.++ .+|+.+.+....+....
T Consensus 19 ~~~~vlVTG-asG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~l~~v~~~-~~Dl~d~~~~~~~~~~~-- 87 (330)
T 2pzm_A 19 SHMRILITG-GAGCLGSNLIEHWLP-------QGHEILVIDNFATGKREVLPPVAGLSVI-EGSVTDAGLLERAFDSF-- 87 (330)
T ss_dssp TCCEEEEET-TTSHHHHHHHHHHGG-------GTCEEEEEECCSSSCGGGSCSCTTEEEE-ECCTTCHHHHHHHHHHH--
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHH-------CCCEEEEEECCCccchhhhhccCCceEE-EeeCCCHHHHHHHHhhc--
Confidence 367898888 568888888877642 2258999998541 123567888 99999976544333222
Q ss_pred CCccEEEeCCCC
Q psy1489 135 DKLDVVLSDMAP 146 (229)
Q Consensus 135 ~~~D~V~sd~~~ 146 (229)
.+|+|+..+..
T Consensus 88 -~~D~vih~A~~ 98 (330)
T 2pzm_A 88 -KPTHVVHSAAA 98 (330)
T ss_dssp -CCSEEEECCCC
T ss_pred -CCCEEEECCcc
Confidence 68999987764
No 380
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.13 E-value=0.065 Score=44.66 Aligned_cols=83 Identities=14% Similarity=0.074 Sum_probs=52.7
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCeEEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+|+|+ |.++..+++..| .+|++++ ++ ... -++..+ ..| . +.+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~G----------a~Vi~~~-~~-~~~~~~~~lGa~~v-~~d---~-------~~v 196 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAG----------YVVDLVS-AS-LSQALAAKRGVRHL-YRE---P-------SQV 196 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHT----------CEEEEEC-SS-CCHHHHHHHTEEEE-ESS---G-------GGC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC----------CEEEEEE-Ch-hhHHHHHHcCCCEE-EcC---H-------HHh
Confidence 57899999999976 777777777764 5999999 76 221 133333 212 1 112
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+..+|+|+-.. |. ..+..+.+.|+++|++++.
T Consensus 197 -~~g~Dvv~d~~-----g~-------------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 197 -TQKYFAIFDAV-----NS-------------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp -CSCEEEEECC-------------------------TTGGGEEEEEEEEEE
T ss_pred -CCCccEEEECC-----Cc-------------hhHHHHHHHhcCCCEEEEE
Confidence 56899999632 11 1123477899999999864
No 381
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=93.08 E-value=0.95 Score=36.17 Aligned_cols=116 Identities=16% Similarity=0.088 Sum_probs=68.1
Q ss_pred CCCCeeEeecCC-CCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---------CCCCCCeEEecCCCCChhHHHHHH
Q psy1489 60 RPGLKVLDCGAA-PGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---------YPIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 60 ~~g~~VLDlGcG-pG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---------~~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.++++||-.|++ +|+++..+++.+.. ...+|+.++.+.- .....+.++ .+|+++.+....+.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~ 83 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKR-------EGAELAFTYVGDRFKDRITEFAAEFGSELVF-PCDVADDAQIDALF 83 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHH-------cCCCEEEEecchhhHHHHHHHHHHcCCcEEE-ECCCCCHHHHHHHH
Confidence 357899999984 57888888876642 2358999987641 012347788 99999976544333
Q ss_pred HHhC--CCCccEEEeCCCCCCC-----CCCc-ccH--HH-HHH----HHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILK--DDKLDVVLSDMAPNAT-----GMRE-MDH--DL-ITQ----LAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~--~~~~D~V~sd~~~~~~-----g~~~-~d~--~~-~~~----~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.+. -+..|+++.++..... ...+ .+. +. .++ -....++.+...++++|.++..
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 152 (271)
T 3ek2_A 84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTL 152 (271)
T ss_dssp HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEE
Confidence 2221 1478999998764221 1111 211 11 111 1123455566677778887753
No 382
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.07 E-value=0.084 Score=46.29 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=56.1
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC--CCCe-EEe--cCCCCCh-------
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI--DGAV-VLS--KCDFTQP------- 122 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~--~~~~-~~~--~~D~~~~------- 122 (229)
+++|++||-.|+ |+ |..+..+++..| .+|++++.++- ... -++. ++. ..|+.+.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~G----------a~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGG----------GIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRR 287 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT----------CEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccc
Confidence 578999999998 54 666666666653 58888887641 000 1111 110 1122110
Q ss_pred ------hHHHHHHHHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 123 ------DIQDRLVTILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 123 ------~~~~~i~~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
...+.+.+.. +..+|+|+... | . ..+..+.+.|++||++++.
T Consensus 288 ~~~~~~~~~~~v~~~~-g~g~Dvvid~~-----G-----~--------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKA-GREPDIVFEHT-----G-----R--------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHHH-SSCCSEEEECS-----C-----H--------HHHHHHHHHSCTTCEEEES
T ss_pred cchhhhHHHHHHHHHh-CCCceEEEECC-----C-----c--------hHHHHHHHHHhcCCEEEEE
Confidence 0123444444 56799999843 2 1 2345677889999999874
No 383
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=92.71 E-value=1.1 Score=36.79 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=67.0
Q ss_pred CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC---------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY---------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~---------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+++||-.|++. .+++..+++.+.. ...+|+.+|.++-. ....+.++ ++|+++.+....+.+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA-------QGAEVALTYLSETFKKRVDPLAESLGVKLTV-PCDVSDAESVDNMFK 100 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-------TTCEEEEEESSGGGHHHHHHHHHHHTCCEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH-------CCCEEEEEeCChHHHHHHHHHHHhcCCeEEE-EcCCCCHHHHHHHHH
Confidence 467899889764 5777777776642 23589999887510 11346778 999999865544333
Q ss_pred HhCC--CCccEEEeCCCCCC-----CCCCcccH--HH-HHH----HHHHHHHHHHHcccCCCEEEEe
Q psy1489 131 ILKD--DKLDVVLSDMAPNA-----TGMREMDH--DL-ITQ----LAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 131 ~~~~--~~~D~V~sd~~~~~-----~g~~~~d~--~~-~~~----~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+.+ +..|+++.++.... ....+.+. +. .++ -....++.+...++.+|++|.-
T Consensus 101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~i 167 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTL 167 (296)
T ss_dssp HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 2211 47999999875421 11111211 11 111 1123455566777788888753
No 384
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.67 E-value=0.07 Score=44.68 Aligned_cols=91 Identities=20% Similarity=0.189 Sum_probs=52.1
Q ss_pred cCCCC-eeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCe-EEecCCCCChhHHHHHH
Q psy1489 59 LRPGL-KVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAV-VLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~-~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~-~~~~~D~~~~~~~~~i~ 129 (229)
+++|+ +||-.|+ |+ |..+..+++..+ .+|++++.++- .. -++. ++ |..+.+ ...+.
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G----------a~vi~~~~~~~-~~~~~~~lGa~~~i---~~~~~~-~~~~~ 210 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRG----------YTVEASTGKAA-EHDYLRVLGAKEVL---AREDVM-AERIR 210 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTT----------CCEEEEESCTT-CHHHHHHTTCSEEE---ECC---------
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCC----------CEEEEEECCHH-HHHHHHHcCCcEEE---ecCCcH-HHHHH
Confidence 45675 8999997 54 666677776654 58999998751 11 1222 22 222211 11122
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
. +.+..+|+|+... |.. .+..+.+.|+++|++++.
T Consensus 211 ~-~~~~~~d~vid~~-----g~~-------------~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 211 P-LDKQRWAAAVDPV-----GGR-------------TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp --CCSCCEEEEEECS-----TTT-------------THHHHHHTEEEEEEEEEC
T ss_pred H-hcCCcccEEEECC-----cHH-------------HHHHHHHhhccCCEEEEE
Confidence 2 3345799999743 211 234578899999999864
No 385
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.64 E-value=0.14 Score=43.52 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=55.4
Q ss_pred cCCCCeeEeecCCC-CchHHHHHHHH-hccCCCCCCCCcEEEEEeCCCC--C--CCCCCe-EEecCCCCChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCGAAP-GSWSQVAVKLV-NSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAV-VLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlGcGp-G~~s~~la~~~-~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~-~~~~~D~~~~~~~~~i~~~ 131 (229)
+++|++||-+|+|+ |.++..+++.. + .+|+++|.++- . .--++. ++ |..+. ..+.+.+.
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~G----------a~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~-~~~~v~~~ 249 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTP----------ATVIALDVKEEKLKLAERLGADHVV---DARRD-PVKQVMEL 249 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCC----------CEEEEEESSHHHHHHHHHTTCSEEE---ETTSC-HHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC----------CeEEEEeCCHHHHHHHHHhCCCEEE---eccch-HHHHHHHH
Confidence 57899999999975 55666666665 4 58999998751 1 011332 23 23333 33445444
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+..+|+|+-... . .. ...+..+.+. ++|++++.
T Consensus 250 ~~g~g~Dvvid~~G-----~----~~------~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 250 TRGRGVNVAMDFVG-----S----QA------TVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp TTTCCEEEEEESSC-----C----HH------HHHHGGGGEE--EEEEEEEC
T ss_pred hCCCCCcEEEECCC-----C----ch------HHHHHHHhhc--CCCEEEEE
Confidence 44447999997332 1 10 0134445555 89998864
No 386
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=92.54 E-value=1.3 Score=33.67 Aligned_cols=64 Identities=20% Similarity=0.292 Sum_probs=45.5
Q ss_pred eeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccEEEeC
Q psy1489 64 KVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSD 143 (229)
Q Consensus 64 ~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd 143 (229)
+||-.|+ +|+++..+++.+. ...+|++++.++- .+ .+|+.+.+....+.+.+ +.+|+|+..
T Consensus 5 ~vlVtGa-sg~iG~~~~~~l~--------~g~~V~~~~r~~~-------~~-~~D~~~~~~~~~~~~~~--~~~d~vi~~ 65 (202)
T 3d7l_A 5 KILLIGA-SGTLGSAVKERLE--------KKAEVITAGRHSG-------DV-TVDITNIDSIKKMYEQV--GKVDAIVSA 65 (202)
T ss_dssp EEEEETT-TSHHHHHHHHHHT--------TTSEEEEEESSSS-------SE-ECCTTCHHHHHHHHHHH--CCEEEEEEC
T ss_pred EEEEEcC-CcHHHHHHHHHHH--------CCCeEEEEecCcc-------ce-eeecCCHHHHHHHHHHh--CCCCEEEEC
Confidence 6888885 6888888888774 2358999987651 35 78999977555444333 468999987
Q ss_pred CCC
Q psy1489 144 MAP 146 (229)
Q Consensus 144 ~~~ 146 (229)
+..
T Consensus 66 ag~ 68 (202)
T 3d7l_A 66 TGS 68 (202)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 387
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.40 E-value=0.095 Score=44.51 Aligned_cols=69 Identities=17% Similarity=0.111 Sum_probs=46.9
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCC-cEEEEEeCCCCC------CCCCCeEEecCCCCChhHHHHHHHHhCCC
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPK-GLVLSVDKLPIY------PIDGAVVLSKCDFTQPDIQDRLVTILKDD 135 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~-~~v~gvD~~~~~------~~~~~~~~~~~D~~~~~~~~~i~~~~~~~ 135 (229)
.+|+||.||.|+++..+.+. | -. ..|.++|+++.. ..++..++ .+|+.+.... .+ +..
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G--------~~~~~v~a~e~d~~a~~ty~~N~~~~~~~-~~DI~~~~~~-~~----~~~ 68 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-G--------LDGEIVAAVDINTVANSVYKHNFPETNLL-NRNIQQLTPQ-VI----KKW 68 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-T--------CSEEEEEEECCCHHHHHHHHHHCTTSCEE-CCCGGGCCHH-HH----HHT
T ss_pred CEEEEECcCccHHHHHHHHc-C--------CCceEEEEEeCCHHHHHHHHHhCCCCcee-ccccccCCHH-Hh----ccC
Confidence 47999999999999887654 2 11 357899998721 23455566 7888775422 12 223
Q ss_pred CccEEEeCCCC
Q psy1489 136 KLDVVLSDMAP 146 (229)
Q Consensus 136 ~~D~V~sd~~~ 146 (229)
.+|+++...++
T Consensus 69 ~~D~l~ggpPC 79 (333)
T 4h0n_A 69 NVDTILMSPPC 79 (333)
T ss_dssp TCCEEEECCCC
T ss_pred CCCEEEecCCC
Confidence 69999987764
No 388
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=92.33 E-value=1.3 Score=35.72 Aligned_cols=78 Identities=17% Similarity=0.085 Sum_probs=51.9
Q ss_pred CCCeeEeecCC-CCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC---------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAA-PGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY---------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcG-pG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~---------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+++||-.|++ +|+++..+++.+.. ...+|+.++.++-. ....+.++ .+|+.+.+....+.+
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~-------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~ 76 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFN-------QGATLAFTYLNESLEKRVRPIAQELNSPYVY-ELDVSKEEHFKSLYN 76 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHT-------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEE-EcCCCCHHHHHHHHH
Confidence 36788988986 48888888887752 23589999887520 01236778 899999765443332
Q ss_pred HhC--CCCccEEEeCCCC
Q psy1489 131 ILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~ 146 (229)
.+. -+..|+++.++..
T Consensus 77 ~~~~~~g~id~lv~nAg~ 94 (275)
T 2pd4_A 77 SVKKDLGSLDFIVHSVAF 94 (275)
T ss_dssp HHHHHTSCEEEEEECCCC
T ss_pred HHHHHcCCCCEEEECCcc
Confidence 211 1468999998754
No 389
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=92.15 E-value=1.1 Score=35.85 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=51.0
Q ss_pred CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----C----CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----Y----PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----~----~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+++||-.|++. |+++..+++.+.. ...+|+.+|.++- . ......++ .+|+++.+....+.+
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~ 79 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHR-------EGAELAFTYQNDKLKGRVEEFAAQLGSDIVL-QCDVAEDASIDTMFA 79 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHH-------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-------CCCEEEEEcCcHHHHHHHHHHHHhcCCcEEE-EccCCCHHHHHHHHH
Confidence 367888888863 8888888877642 2358999887651 0 01234677 899999765544333
Q ss_pred HhCC--CCccEEEeCCCC
Q psy1489 131 ILKD--DKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~~--~~~D~V~sd~~~ 146 (229)
...+ +.+|+++.++..
T Consensus 80 ~~~~~~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 80 ELGKVWPKFDGFVHSIGF 97 (265)
T ss_dssp HHHTTCSSEEEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 2211 368999998754
No 390
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=92.06 E-value=0.59 Score=37.29 Aligned_cols=114 Identities=12% Similarity=-0.039 Sum_probs=63.7
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
++.+||-.| |+|+++..+++.+... ...+|+.++.++- . .-..+.++ .+|+.+.+....+.+
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~------~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~~~~~~~ 74 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRL------FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH-QLDIDDLQSIRALRD 74 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHH------SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHh------cCCeEEEEeCChHHHHHHHHHHHhcCCeeEEE-ECCCCCHHHHHHHHH
Confidence 456788777 5678888888766410 1258888887641 0 01357788 999999764443322
Q ss_pred HhC--CCCccEEEeCCCCCCCCCCcc---cHHH-HHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 131 ILK--DDKLDVVLSDMAPNATGMREM---DHDL-ITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~~~~g~~~~---d~~~-~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
.+. -+.+|+|+.++.......... +.+. .+. -...+++.+...++++|++|.
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 136 (276)
T 1wma_A 75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVN 136 (276)
T ss_dssp HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEE
Confidence 111 136999998875432221111 1111 111 112345556666777788765
No 391
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=92.00 E-value=1.7 Score=36.00 Aligned_cols=76 Identities=12% Similarity=0.179 Sum_probs=50.1
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+++||-.| |+|.++..+++.+...+ ...+|+++|..... ..+++.++ .+|+.+.+....+..
T Consensus 23 ~~~~vlVtG-atG~iG~~l~~~L~~~g-----~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~Dl~d~~~~~~~~~ 95 (346)
T 4egb_A 23 NAMNILVTG-GAGFIGSNFVHYMLQSY-----ETYKIINFDALTYSGNLNNVKSIQDHPNYYFV-KGEIQNGELLEHVIK 95 (346)
T ss_dssp -CEEEEEET-TTSHHHHHHHHHHHHHC-----TTEEEEEEECCCTTCCGGGGTTTTTCTTEEEE-ECCTTCHHHHHHHHH
T ss_pred CCCeEEEEC-CccHHHHHHHHHHHhhC-----CCcEEEEEeccccccchhhhhhhccCCCeEEE-EcCCCCHHHHHHHHh
Confidence 467899888 56888888777653110 23589999876411 11478888 999999765544332
Q ss_pred HhCCCCccEEEeCCCC
Q psy1489 131 ILKDDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~ 146 (229)
+..+|+|+..+..
T Consensus 96 ---~~~~d~Vih~A~~ 108 (346)
T 4egb_A 96 ---ERDVQVIVNFAAE 108 (346)
T ss_dssp ---HHTCCEEEECCCC
T ss_pred ---hcCCCEEEECCcc
Confidence 3358999987654
No 392
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.98 E-value=1.5 Score=36.35 Aligned_cols=70 Identities=16% Similarity=0.099 Sum_probs=48.9
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccEE
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVV 140 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V 140 (229)
++++||-.| |+|.++..+++.+.. ...+|++++.++-. .++.++ .+|+.+......+ +. .+|+|
T Consensus 18 ~~~~vlVtG-atG~iG~~l~~~L~~-------~G~~V~~~~r~~~~--~~~~~~-~~Dl~d~~~~~~~---~~--~~d~v 81 (347)
T 4id9_A 18 GSHMILVTG-SAGRVGRAVVAALRT-------QGRTVRGFDLRPSG--TGGEEV-VGSLEDGQALSDA---IM--GVSAV 81 (347)
T ss_dssp ---CEEEET-TTSHHHHHHHHHHHH-------TTCCEEEEESSCCS--SCCSEE-ESCTTCHHHHHHH---HT--TCSEE
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHh-------CCCEEEEEeCCCCC--CCccEE-ecCcCCHHHHHHH---Hh--CCCEE
Confidence 467899888 578888888877642 23589999987622 678888 9999997654433 32 68999
Q ss_pred EeCCCC
Q psy1489 141 LSDMAP 146 (229)
Q Consensus 141 ~sd~~~ 146 (229)
+..++.
T Consensus 82 ih~A~~ 87 (347)
T 4id9_A 82 LHLGAF 87 (347)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 987654
No 393
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=91.93 E-value=1.8 Score=35.71 Aligned_cols=74 Identities=12% Similarity=0.023 Sum_probs=50.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC-----------CCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP-----------IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~-----------~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.+++||-.| |+|+++..+++.+.. ...+|+++|.++-.. -.++.++ .+|+.+.+....+.
T Consensus 4 ~~~~vlVTG-atG~iG~~l~~~L~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~ 74 (341)
T 3enk_A 4 TKGTILVTG-GAGYIGSHTAVELLA-------HGYDVVIADNLVNSKREAIARIEKITGKTPAFH-ETDVSDERALARIF 74 (341)
T ss_dssp SSCEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEE-CCCTTCHHHHHHHH
T ss_pred CCcEEEEec-CCcHHHHHHHHHHHH-------CCCcEEEEecCCcchHHHHHHHHhhcCCCceEE-EeecCCHHHHHHHH
Confidence 356788777 678888888877642 235899998865211 1367888 99999976554433
Q ss_pred HHhCCCCccEEEeCCCC
Q psy1489 130 TILKDDKLDVVLSDMAP 146 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~ 146 (229)
+ ...+|+|+..+..
T Consensus 75 ~---~~~~d~vih~A~~ 88 (341)
T 3enk_A 75 D---AHPITAAIHFAAL 88 (341)
T ss_dssp H---HSCCCEEEECCCC
T ss_pred h---ccCCcEEEECccc
Confidence 2 3479999987753
No 394
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=91.90 E-value=1.1 Score=36.86 Aligned_cols=75 Identities=15% Similarity=-0.048 Sum_probs=49.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.++++||-.| |+|.++..+++.+.. ...+|++++.++-. ...++.++ .+|+.+.+....+.
T Consensus 12 ~~~~~vlVTG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~ 82 (335)
T 1rpn_A 12 SMTRSALVTG-ITGQDGAYLAKLLLE-------KGYRVHGLVARRSSDTRWRLRELGIEGDIQYE-DGDMADACSVQRAV 82 (335)
T ss_dssp ---CEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEE-ECCTTCHHHHHHHH
T ss_pred ccCCeEEEEC-CCChHHHHHHHHHHH-------CCCeEEEEeCCCccccccchhhccccCceEEE-ECCCCCHHHHHHHH
Confidence 4688999887 578888888876642 23589999987521 11357788 89999976544332
Q ss_pred HHhCCCCccEEEeCCCC
Q psy1489 130 TILKDDKLDVVLSDMAP 146 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~ 146 (229)
. +..+|+|+..+..
T Consensus 83 ~---~~~~d~Vih~A~~ 96 (335)
T 1rpn_A 83 I---KAQPQEVYNLAAQ 96 (335)
T ss_dssp H---HHCCSEEEECCSC
T ss_pred H---HcCCCEEEECccc
Confidence 2 2258999987653
No 395
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=91.82 E-value=1.5 Score=33.85 Aligned_cols=69 Identities=12% Similarity=0.216 Sum_probs=49.4
Q ss_pred eeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--CCCCCCCeEEecCCCCC-hhHHHHHHHHhCCCCccEE
Q psy1489 64 KVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--IYPIDGAVVLSKCDFTQ-PDIQDRLVTILKDDKLDVV 140 (229)
Q Consensus 64 ~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~~~~~~~~~~~~~D~~~-~~~~~~i~~~~~~~~~D~V 140 (229)
+||-.| |+|.++..+++.+.. ...+|++++.++ .....++.++ .+|+.+ .+. +...+. .+|+|
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~-------~g~~V~~~~R~~~~~~~~~~~~~~-~~D~~d~~~~---~~~~~~--~~d~v 67 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLST-------TDYQIYAGARKVEQVPQYNNVKAV-HFDVDWTPEE---MAKQLH--GMDAI 67 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTT-------SSCEEEEEESSGGGSCCCTTEEEE-ECCTTSCHHH---HHTTTT--TCSEE
T ss_pred eEEEEC-CCCHHHHHHHHHHHH-------CCCEEEEEECCccchhhcCCceEE-EecccCCHHH---HHHHHc--CCCEE
Confidence 577677 568899999988752 235899999886 2334678899 999998 653 333343 59999
Q ss_pred EeCCCC
Q psy1489 141 LSDMAP 146 (229)
Q Consensus 141 ~sd~~~ 146 (229)
+..+..
T Consensus 68 i~~ag~ 73 (219)
T 3dqp_A 68 INVSGS 73 (219)
T ss_dssp EECCCC
T ss_pred EECCcC
Confidence 987764
No 396
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.79 E-value=1.3 Score=36.31 Aligned_cols=115 Identities=17% Similarity=0.075 Sum_probs=66.3
Q ss_pred CCCeeEeecCCCC-chHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---------CCCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPG-SWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---------YPIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG-~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---------~~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+++||-.|++.| +++..+++.+.. ...+|+.++.++- .....+.++ .+|+++.+....+.+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE-------AGAELAFTYQGDALKKRVEPLAEELGAFVAG-HCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH-------TTCEEEEEECSHHHHHHHHHHHHHHTCEEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-------CCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-ECCCCCHHHHHHHHH
Confidence 4678999998754 577777766542 2358888887741 012356778 999999865544333
Q ss_pred HhC--CCCccEEEeCCCCCC-----CCCCcccH--HH-HHH----HHHHHHHHHHHcccCCCEEEEe
Q psy1489 131 ILK--DDKLDVVLSDMAPNA-----TGMREMDH--DL-ITQ----LAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~~~-----~g~~~~d~--~~-~~~----~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+. -+..|+++.++.... ....+.+. +. .+. -....++.+...++.+|++|.-
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 221 147999999875421 11111111 11 111 1123455666777788888753
No 397
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.70 E-value=0.61 Score=33.77 Aligned_cols=96 Identities=7% Similarity=-0.010 Sum_probs=58.3
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHhCCCCcc
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTILKDDKLD 138 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D 138 (229)
.+|+=+|| |.++..+++.+.. ....|+++|.++- . .-.++.++ .+|.++++.... ..-..+|
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~-------~g~~v~vid~~~~~~~~~~~~g~~~i-~gd~~~~~~l~~----a~i~~ad 73 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLA-------SDIPLVVIETSRTRVDELRERGVRAV-LGNAANEEIMQL----AHLECAK 73 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHH-------TTCCEEEEESCHHHHHHHHHTTCEEE-ESCTTSHHHHHH----TTGGGCS
T ss_pred CCEEEECc--CHHHHHHHHHHHH-------CCCCEEEEECCHHHHHHHHHcCCCEE-ECCCCCHHHHHh----cCcccCC
Confidence 56887887 5566666665531 2358999999871 1 12467788 899999765432 2234689
Q ss_pred EEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 139 VVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 139 ~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
+|+..... ..... .+....+.+.|+..++.....
T Consensus 74 ~vi~~~~~---------~~~n~-----~~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 74 WLILTIPN---------GYEAG-----EIVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp EEEECCSC---------HHHHH-----HHHHHHHHHCSSSEEEEEESS
T ss_pred EEEEECCC---------hHHHH-----HHHHHHHHHCCCCeEEEEECC
Confidence 99974421 21111 122345567788888776643
No 398
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=91.63 E-value=1.6 Score=33.97 Aligned_cols=74 Identities=16% Similarity=0.102 Sum_probs=49.1
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhC-CCCccEE
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILK-DDKLDVV 140 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~-~~~~D~V 140 (229)
+++||-.|+ +|+++..+++.+.. ...+|+.+|.++- ...+.++ .+|+.+.+....+.+.+. ...+|++
T Consensus 2 ~k~vlVtGa-sggiG~~la~~l~~-------~G~~V~~~~r~~~--~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~d~l 70 (242)
T 1uay_A 2 ERSALVTGG-ASGLGRAAALALKA-------RGYRVVVLDLRRE--GEDLIYV-EGDVTREEDVRRAVARAQEEAPLFAV 70 (242)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-------HTCEEEEEESSCC--SSSSEEE-ECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred CCEEEEeCC-CChHHHHHHHHHHH-------CCCEEEEEccCcc--ccceEEE-eCCCCCHHHHHHHHHHHHhhCCceEE
Confidence 457887785 57777777766532 1258999998763 5567888 999999765444332221 1368999
Q ss_pred EeCCCC
Q psy1489 141 LSDMAP 146 (229)
Q Consensus 141 ~sd~~~ 146 (229)
+.++..
T Consensus 71 i~~ag~ 76 (242)
T 1uay_A 71 VSAAGV 76 (242)
T ss_dssp EECCCC
T ss_pred EEcccc
Confidence 987653
No 399
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.62 E-value=0.024 Score=48.33 Aligned_cols=90 Identities=17% Similarity=0.151 Sum_probs=54.0
Q ss_pred cC-CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----C-CCCC-eEEecCCCCChhHHHHHHH
Q psy1489 59 LR-PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----P-IDGA-VVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 59 ~~-~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----~-~~~~-~~~~~~D~~~~~~~~~i~~ 130 (229)
++ +|++||-+|+|+ |.++..+++..+ .+|+++|.++-. . --++ .++ |..+. +.+.+
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~G----------a~Vi~~~~~~~~~~~~~~~lGa~~vi---~~~~~---~~~~~ 240 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMG----------HHVTVISSSNKKREEALQDLGADDYV---IGSDQ---AKMSE 240 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHT----------CEEEEEESSTTHHHHHHTTSCCSCEE---ETTCH---HHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC----------CeEEEEeCChHHHHHHHHHcCCceee---ccccH---HHHHH
Confidence 45 899999999876 556666676654 589999988621 0 1122 222 22232 22333
Q ss_pred HhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 131 ILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 131 ~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.. +.+|+|+-... .. ..+..+.+.|+++|++++.
T Consensus 241 ~~--~g~D~vid~~g-----~~------------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 241 LA--DSLDYVIDTVP-----VH------------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp ST--TTEEEEEECCC-----SC------------CCSHHHHTTEEEEEEEEEC
T ss_pred hc--CCCCEEEECCC-----Ch------------HHHHHHHHHhccCCEEEEe
Confidence 22 36999997332 11 1134477899999999864
No 400
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=91.62 E-value=2.5 Score=34.21 Aligned_cols=78 Identities=21% Similarity=0.222 Sum_probs=51.3
Q ss_pred CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----C----CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----Y----PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----~----~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+++||-.|++. |+++..+++.+.. ...+|+.++.++- . ...++.++ .+|+++.+....+.+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~v~~~~~ 91 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHR-------EGAQLAFTYATPKLEKRVREIAKGFGSDLVV-KCDVSLDEDIKNLKK 91 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH-------TTCEEEEEESSGGGHHHHHHHHHHTTCCCEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-------cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEE-EcCCCCHHHHHHHHH
Confidence 467899889874 8888888876642 2358988887651 0 01246778 899999765443332
Q ss_pred HhC--CCCccEEEeCCCC
Q psy1489 131 ILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~ 146 (229)
.+. -+.+|+++.++..
T Consensus 92 ~~~~~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 92 FLEENWGSLDIIVHSIAY 109 (285)
T ss_dssp HHHHHTSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 211 1468999998754
No 401
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=91.56 E-value=4.3 Score=32.15 Aligned_cols=110 Identities=14% Similarity=0.125 Sum_probs=62.1
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhC--CCCccE
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILK--DDKLDV 139 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~~~D~ 139 (229)
+++||-.|++ |+++..+++.+.. ...+|+.+|.++. .... ..+ ..|+.+.+....+.+.+. -+.+|+
T Consensus 22 ~k~vlITGas-~gIG~~la~~l~~-------~G~~V~~~~r~~~-~~~~-~~~-~~d~~d~~~v~~~~~~~~~~~g~iD~ 90 (251)
T 3orf_A 22 SKNILVLGGS-GALGAEVVKFFKS-------KSWNTISIDFREN-PNAD-HSF-TIKDSGEEEIKSVIEKINSKSIKVDT 90 (251)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHH-------TTCEEEEEESSCC-TTSS-EEE-ECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-------CCCEEEEEeCCcc-cccc-cce-EEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence 5678877766 5677777766542 2358999998872 2222 344 678888765544433221 247899
Q ss_pred EEeCCCCCCCC--CCcc--cHHH-HH----HHHHHHHHHHHHcccCCCEEEE
Q psy1489 140 VLSDMAPNATG--MREM--DHDL-IT----QLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 140 V~sd~~~~~~g--~~~~--d~~~-~~----~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
++.++.....+ .... +.+. .+ .-...+++.+...++++|++|.
T Consensus 91 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 142 (251)
T 3orf_A 91 FVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVL 142 (251)
T ss_dssp EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEE
Confidence 99987642211 1111 1111 11 1112345556667777888775
No 402
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.50 E-value=0.29 Score=41.50 Aligned_cols=97 Identities=16% Similarity=0.142 Sum_probs=55.0
Q ss_pred cCCC-CeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-----C-C--CCCe-EEecCCCCChhHHH
Q psy1489 59 LRPG-LKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-----P-I--DGAV-VLSKCDFTQPDIQD 126 (229)
Q Consensus 59 ~~~g-~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-----~-~--~~~~-~~~~~D~~~~~~~~ 126 (229)
+++| ++||-.|+ |+ |.++..+++..| .+|+++..++-. . + -++. ++...+....+..+
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~G----------a~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 233 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLN----------FNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP 233 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHT----------CEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCC----------CEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHH
Confidence 5688 99999997 65 777777787764 577777654311 0 0 1222 22011000022333
Q ss_pred HHHHHh--CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 127 RLVTIL--KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 127 ~i~~~~--~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+.+.. .+..+|+|+-.. | . ... ..+.+.|+++|++++.
T Consensus 234 ~i~~~t~~~~~g~Dvvid~~-----G-----~-------~~~-~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 234 TIKEWIKQSGGEAKLALNCV-----G-----G-------KSS-TGIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHHHHHHTCCEEEEEESS-----C-----H-------HHH-HHHHHTSCTTCEEEEC
T ss_pred HHHHHhhccCCCceEEEECC-----C-----c-------hhH-HHHHHHhccCCEEEEe
Confidence 444433 345799999733 1 1 011 2567899999999864
No 403
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.41 E-value=0.89 Score=37.81 Aligned_cols=71 Identities=15% Similarity=0.158 Sum_probs=49.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC---------------CCCeEEecCCCCChhHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI---------------DGAVVLSKCDFTQPDIQ 125 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~---------------~~~~~~~~~D~~~~~~~ 125 (229)
.+++||-.| |+|.++..+++.+.. ...+|++++.++.... .++.++ .+|+.+.+..
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~ 94 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLK-------LNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFI-EGDIRDLTTC 94 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEE-ECCTTCHHHH
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHH-------CCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEE-EccCCCHHHH
Confidence 367899887 578888888876642 2358999998652110 578889 9999997643
Q ss_pred HHHHHHhCCCCccEEEeCCC
Q psy1489 126 DRLVTILKDDKLDVVLSDMA 145 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~ 145 (229)
. ..+. .+|+|+..+.
T Consensus 95 ~---~~~~--~~d~Vih~A~ 109 (351)
T 3ruf_A 95 E---QVMK--GVDHVLHQAA 109 (351)
T ss_dssp H---HHTT--TCSEEEECCC
T ss_pred H---HHhc--CCCEEEECCc
Confidence 3 3343 6999998664
No 404
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=91.40 E-value=2.4 Score=33.94 Aligned_cols=70 Identities=14% Similarity=0.208 Sum_probs=48.9
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-CCCCCeEEecCCCCChhHHHHHHHHhCCCCccEEE
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-PIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVL 141 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~ 141 (229)
++||-.|+ +|+++..+++.+.. ...+|+++|.++.. ...++.++ .+|+.+.+....+ +. .+|+|+
T Consensus 4 k~vlVTGa-sg~IG~~la~~L~~-------~G~~V~~~~r~~~~~~~~~~~~~-~~Dl~d~~~~~~~---~~--~~D~vi 69 (267)
T 3rft_A 4 KRLLVTGA-AGQLGRVMRERLAP-------MAEILRLADLSPLDPAGPNEECV-QCDLADANAVNAM---VA--GCDGIV 69 (267)
T ss_dssp EEEEEEST-TSHHHHHHHHHTGG-------GEEEEEEEESSCCCCCCTTEEEE-ECCTTCHHHHHHH---HT--TCSEEE
T ss_pred CEEEEECC-CCHHHHHHHHHHHh-------cCCEEEEEecCCccccCCCCEEE-EcCCCCHHHHHHH---Hc--CCCEEE
Confidence 46776664 68888888887742 12479999988732 23467888 9999997654433 32 689999
Q ss_pred eCCCC
Q psy1489 142 SDMAP 146 (229)
Q Consensus 142 sd~~~ 146 (229)
.++..
T Consensus 70 ~~Ag~ 74 (267)
T 3rft_A 70 HLGGI 74 (267)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 98764
No 405
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=91.40 E-value=3.6 Score=33.88 Aligned_cols=74 Identities=16% Similarity=0.166 Sum_probs=50.1
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC------CCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY------PIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~------~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
.+++||-.| |+|.++..+++.+.. ...+|++++.++-. .+.++.++ .+|+.+.+....+. .+
T Consensus 20 ~~~~vlVTG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~l~~~~~~~~~-~~Dl~d~~~~~~~~---~~ 87 (333)
T 2q1w_A 20 HMKKVFITG-ICGQIGSHIAELLLE-------RGDKVVGIDNFATGRREHLKDHPNLTFV-EGSIADHALVNQLI---GD 87 (333)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEECCSSCCGGGSCCCTTEEEE-ECCTTCHHHHHHHH---HH
T ss_pred CCCEEEEeC-CccHHHHHHHHHHHH-------CCCEEEEEECCCccchhhHhhcCCceEE-EEeCCCHHHHHHHH---hc
Confidence 357888887 578888888876642 23589999886411 12467888 99999976544332 22
Q ss_pred CCccEEEeCCCC
Q psy1489 135 DKLDVVLSDMAP 146 (229)
Q Consensus 135 ~~~D~V~sd~~~ 146 (229)
..+|+|+..+..
T Consensus 88 ~~~D~vih~A~~ 99 (333)
T 2q1w_A 88 LQPDAVVHTAAS 99 (333)
T ss_dssp HCCSEEEECCCC
T ss_pred cCCcEEEECcee
Confidence 358999987764
No 406
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=91.33 E-value=3.8 Score=32.37 Aligned_cols=77 Identities=13% Similarity=0.045 Sum_probs=49.3
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhC--CCCcc
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILK--DDKLD 138 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~~~D 138 (229)
.++++|-.|+ +|+++..+++.+.. ...+|+.++.++.....++.++ ..|+.+.+....+.+... -+.+|
T Consensus 6 ~~k~vlVTGa-s~giG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~~~~~g~id 76 (250)
T 2fwm_X 6 SGKNVWVTGA-GKGIGYATALAFVE-------AGAKVTGFDQAFTQEQYPFATE-VMDVADAAQVAQVCQRLLAETERLD 76 (250)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-------TTCEEEEEESCCCSSCCSSEEE-ECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-------CCCEEEEEeCchhhhcCCceEE-EcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3677888885 46777777766542 2358999988762111237778 899999765443322111 24699
Q ss_pred EEEeCCCC
Q psy1489 139 VVLSDMAP 146 (229)
Q Consensus 139 ~V~sd~~~ 146 (229)
+++.++..
T Consensus 77 ~lv~~Ag~ 84 (250)
T 2fwm_X 77 ALVNAAGI 84 (250)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998754
No 407
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=91.31 E-value=2.6 Score=32.65 Aligned_cols=102 Identities=10% Similarity=0.110 Sum_probs=60.9
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccEE
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVV 140 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V 140 (229)
.++++|-.|++ |+++..+++.+.. ...+|+.++.++ ..|+++.+....+.+.+ +..|++
T Consensus 5 ~~k~vlVTGas-~gIG~~~a~~l~~-------~G~~V~~~~r~~-----------~~D~~~~~~v~~~~~~~--g~id~l 63 (223)
T 3uce_A 5 DKTVYVVLGGT-SGIGAELAKQLES-------EHTIVHVASRQT-----------GLDISDEKSVYHYFETI--GAFDHL 63 (223)
T ss_dssp CCEEEEEETTT-SHHHHHHHHHHCS-------TTEEEEEESGGG-----------TCCTTCHHHHHHHHHHH--CSEEEE
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-------CCCEEEEecCCc-----------ccCCCCHHHHHHHHHHh--CCCCEE
Confidence 35677777755 6778888887742 234788888765 46888876555554444 579999
Q ss_pred EeCCCCC-C-CCCCcccHHHH---HH----HHHHHHHHHHHcccCCCEEEEe
Q psy1489 141 LSDMAPN-A-TGMREMDHDLI---TQ----LAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 141 ~sd~~~~-~-~g~~~~d~~~~---~~----~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+.++... . ....+.+.... ++ -....++.+...++++|+++..
T Consensus 64 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~ 115 (223)
T 3uce_A 64 IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLT 115 (223)
T ss_dssp EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEe
Confidence 9987642 1 11222221111 11 1123455666777888887753
No 408
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.28 E-value=1.6 Score=31.19 Aligned_cols=69 Identities=19% Similarity=0.103 Sum_probs=46.0
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHhCCCCc
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTILKDDKL 137 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~ 137 (229)
..+|+-+|| |.++..+++.+.. ....|+++|.++- . ...++.++ .+|.++++.... ..-..+
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~-------~g~~V~~id~~~~~~~~~~~~~~~~~-~gd~~~~~~l~~----~~~~~~ 71 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTA-------AGKKVLAVDKSKEKIELLEDEGFDAV-IADPTDESFYRS----LDLEGV 71 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-------TTCCEEEEESCHHHHHHHHHTTCEEE-ECCTTCHHHHHH----SCCTTC
T ss_pred CCEEEEECC--CHHHHHHHHHHHH-------CCCeEEEEECCHHHHHHHHHCCCcEE-ECCCCCHHHHHh----CCcccC
Confidence 457888888 5577777776642 2358999999861 1 12467778 899999765432 233578
Q ss_pred cEEEeCC
Q psy1489 138 DVVLSDM 144 (229)
Q Consensus 138 D~V~sd~ 144 (229)
|+|+...
T Consensus 72 d~vi~~~ 78 (141)
T 3llv_A 72 SAVLITG 78 (141)
T ss_dssp SEEEECC
T ss_pred CEEEEec
Confidence 9998843
No 409
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.18 E-value=4.1 Score=33.16 Aligned_cols=113 Identities=13% Similarity=0.056 Sum_probs=64.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.|++||-.|++ |+++..+++.+.. ...+|+.+|.++.. .-..+.++ .+|+.+.+....+.
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~ 116 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAK-------EGANIAIAYLDEEGDANETKQYVEKEGVKCVLL-PGDLSDEQHCKDIV 116 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-------TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE-ESCTTSHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-------CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHH
Confidence 46788888865 6677777766542 23588888887510 11356778 89999976544332
Q ss_pred HHhC--CCCccEEEeCCCCCCC--CCCccc--HHH-HHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 130 TILK--DDKLDVVLSDMAPNAT--GMREMD--HDL-ITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 130 ~~~~--~~~~D~V~sd~~~~~~--g~~~~d--~~~-~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
+.+. -+..|+++.++..... ...+.+ .+. .++ -...+++.+...++++|.+|.
T Consensus 117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~ 180 (291)
T 3ijr_A 117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIIN 180 (291)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEE
Confidence 2111 1468999998653211 111111 111 111 112455667777888898775
No 410
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=91.07 E-value=0.3 Score=40.68 Aligned_cols=73 Identities=12% Similarity=0.042 Sum_probs=48.8
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcE-EEEEeCCCC------CCCCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGL-VLSVDKLPI------YPIDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~-v~gvD~~~~------~~~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+...+|+||.||.|+++..+.+. | -... |.++|+++. ...++..++ .+|+.+.... .+.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G--------~~~~~v~a~E~d~~a~~ty~~N~~~~~~~-~~DI~~i~~~-~i~~-- 80 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-G--------IQVDRYIASEVCEDSITVGMVRHQGKIMY-VGDVRSVTQK-HIQE-- 80 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-T--------BCEEEEEEECCCHHHHHHHHHHTTTCEEE-ECCGGGCCHH-HHHH--
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-C--------CccceEEEEECCHHHHHHHHHhCCCCcee-CCChHHccHH-Hhcc--
Confidence 34679999999999999886653 3 1122 689999862 123455667 8998875432 2322
Q ss_pred CCCCccEEEeCCCC
Q psy1489 133 KDDKLDVVLSDMAP 146 (229)
Q Consensus 133 ~~~~~D~V~sd~~~ 146 (229)
...+|+++...++
T Consensus 81 -~~~~Dll~ggpPC 93 (295)
T 2qrv_A 81 -WGPFDLVIGGSPC 93 (295)
T ss_dssp -TCCCSEEEECCCC
T ss_pred -cCCcCEEEecCCC
Confidence 1469999998764
No 411
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.00 E-value=0.22 Score=42.51 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=54.2
Q ss_pred cCCCCeeEeec-CCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCC-----CCCeEEecCCCCChhHHHHHHHH
Q psy1489 59 LRPGLKVLDCG-AAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPI-----DGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~~g~~VLDlG-cGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~-----~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
+++|++||-.| +|+ |..+..+++..+ .+|++++ ++ ... -++..+ .|..+.+..+.+.+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G----------a~Vi~~~-~~-~~~~~~~~lGa~~v--~~~~~~~~~~~~~~- 245 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD----------AHVTAVC-SQ-DASELVRKLGADDV--IDYKSGSVEEQLKS- 245 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT----------CEEEEEE-CG-GGHHHHHHTTCSEE--EETTSSCHHHHHHT-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC----------CEEEEEe-Ch-HHHHHHHHcCCCEE--EECCchHHHHHHhh-
Confidence 56899999999 565 666666676653 5899988 44 111 123221 12333333333332
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
...+|+|+.... .. . ..+..+.+.|++||++++.
T Consensus 246 --~~g~D~vid~~g-----~~---~--------~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 246 --LKPFDFILDNVG-----GS---T--------ETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp --SCCBSEEEESSC-----TT---H--------HHHGGGGBCSSSCCEEEES
T ss_pred --cCCCCEEEECCC-----Ch---h--------hhhHHHHHhhcCCcEEEEe
Confidence 257999997432 11 0 1345577889999999864
No 412
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.95 E-value=3.5 Score=30.06 Aligned_cols=71 Identities=17% Similarity=0.114 Sum_probs=43.1
Q ss_pred CCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--CCC---CCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 60 RPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--IYP---IDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 60 ~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~~~---~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
.++.+|+-+|+ |.++..+++.+.. ....|+++|.++ ... ..++.++ .+|..+.+.. .. ..-
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~-------~g~~V~vid~~~~~~~~~~~~~g~~~~-~~d~~~~~~l---~~-~~~ 82 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASS-------SGHSVVVVDKNEYAFHRLNSEFSGFTV-VGDAAEFETL---KE-CGM 82 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHH-------TTCEEEEEESCGGGGGGSCTTCCSEEE-ESCTTSHHHH---HT-TTG
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHh-------CCCeEEEEECCHHHHHHHHhcCCCcEE-EecCCCHHHH---HH-cCc
Confidence 46789999987 5566665555431 124899999886 212 2356666 7887775432 21 112
Q ss_pred CCccEEEeCC
Q psy1489 135 DKLDVVLSDM 144 (229)
Q Consensus 135 ~~~D~V~sd~ 144 (229)
..+|+|+...
T Consensus 83 ~~ad~Vi~~~ 92 (155)
T 2g1u_A 83 EKADMVFAFT 92 (155)
T ss_dssp GGCSEEEECS
T ss_pred ccCCEEEEEe
Confidence 3689999843
No 413
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=90.87 E-value=2.9 Score=33.62 Aligned_cols=77 Identities=13% Similarity=0.093 Sum_probs=50.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhC--CCCcc
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILK--DDKLD 138 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~~~D 138 (229)
.+++||-.|++ |+++..+++.+.. ...+|+.+|.++......+..+ +.|+++.+....+.+.+. -+..|
T Consensus 13 ~~k~vlVTGas-~GIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~g~iD 83 (269)
T 3vtz_A 13 TDKVAIVTGGS-SGIGLAVVDALVR-------YGAKVVSVSLDEKSDVNVSDHF-KIDVTNEEEVKEAVEKTTKKYGRID 83 (269)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH-------TTCEEEEEESCC--CTTSSEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-------CCCEEEEEeCCchhccCceeEE-EecCCCHHHHHHHHHHHHHHcCCCC
Confidence 57888888865 5666666766542 2358999998873333456778 899999765443332211 14799
Q ss_pred EEEeCCCC
Q psy1489 139 VVLSDMAP 146 (229)
Q Consensus 139 ~V~sd~~~ 146 (229)
+++.++..
T Consensus 84 ~lv~nAg~ 91 (269)
T 3vtz_A 84 ILVNNAGI 91 (269)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998764
No 414
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=90.80 E-value=3.9 Score=32.66 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=49.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-CCCCCeEEecCCCCChhHHHHHHHHhC--CCCc
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-PIDGAVVLSKCDFTQPDIQDRLVTILK--DDKL 137 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~~~ 137 (229)
.+++||-.|+ +|+++..+++.+.. ...+|+.+|.++.. ....+.++ .+|+++.+....+.+... -+.+
T Consensus 27 ~~k~vlVTGa-s~gIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 27 QQKVVVITGA-SQGIGAGLVRAYRD-------RNYRVVATSRSIKPSADPDIHTV-AGDISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp TCCEEEESSC-SSHHHHHHHHHHHH-------TTCEEEEEESSCCCCSSTTEEEE-ESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHH-------CCCEEEEEeCChhhcccCceEEE-EccCCCHHHHHHHHHHHHHHCCCC
Confidence 4677887775 46677777766642 23589999987621 22357788 999999865443332111 1369
Q ss_pred cEEEeCCCC
Q psy1489 138 DVVLSDMAP 146 (229)
Q Consensus 138 D~V~sd~~~ 146 (229)
|+++.++..
T Consensus 98 D~lv~nAg~ 106 (260)
T 3un1_A 98 DSLVNNAGV 106 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999998754
No 415
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=90.71 E-value=1.4 Score=35.22 Aligned_cols=78 Identities=22% Similarity=0.197 Sum_probs=50.5
Q ss_pred CCCeeEeecCC-CCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----C----CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAA-PGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----Y----PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcG-pG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----~----~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+++||-.|++ +|+++..+++.+.. ...+|+.++.++- . ....+.++ .+|+++.+....+.+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~v~~~~~ 78 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKE-------AGAEVALSYQAERLRPEAEKLAEALGGALLF-RADVTQDEELDALFA 78 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHH-------HTCEEEEEESCGGGHHHHHHHHHHTTCCEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH-------CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEE-ECCCCCHHHHHHHHH
Confidence 36789999986 48888888776642 1258988887651 0 01246778 899999764443322
Q ss_pred HhC--CCCccEEEeCCCC
Q psy1489 131 ILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~ 146 (229)
... -+.+|+++.++..
T Consensus 79 ~~~~~~g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 79 GVKEAFGGLDYLVHAIAF 96 (261)
T ss_dssp HHHHHHSSEEEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 111 1368999998754
No 416
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=90.63 E-value=5.5 Score=31.80 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=49.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhC--CCCcc
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILK--DDKLD 138 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~~~D 138 (229)
.+++||-.|++ |+++..+++.+.. ...+|+.++.++- .-.++.++ .+|+.+.+....+.+.+. -+.+|
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~-------~G~~V~~~~r~~~-~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~g~iD 76 (264)
T 2dtx_A 7 RDKVVIVTGAS-MGIGRAIAERFVD-------EGSKVIDLSIHDP-GEAKYDHI-ECDVTNPDQVKASIDHIFKEYGSIS 76 (264)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHH-------TTCEEEEEESSCC-CSCSSEEE-ECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-------CCCEEEEEecCcc-cCCceEEE-EecCCCHHHHHHHHHHHHHHcCCCC
Confidence 35678877754 6677777766542 2358999988762 23457788 899999764443322111 13689
Q ss_pred EEEeCCCC
Q psy1489 139 VVLSDMAP 146 (229)
Q Consensus 139 ~V~sd~~~ 146 (229)
+++.++..
T Consensus 77 ~lv~~Ag~ 84 (264)
T 2dtx_A 77 VLVNNAGI 84 (264)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998764
No 417
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=90.60 E-value=4.7 Score=33.02 Aligned_cols=73 Identities=18% Similarity=0.068 Sum_probs=48.9
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC----------CCCCeEEecCCCCChhHHHHHHHH
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP----------IDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~----------~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
+++||-.| |+|.++..+++.+.. ...+|++++.++-.. ..++.++ .+|+.+.+....+.+
T Consensus 3 ~~~vlVtG-atG~iG~~l~~~L~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~- 72 (345)
T 2z1m_A 3 GKRALITG-IRGQDGAYLAKLLLE-------KGYEVYGADRRSGEFASWRLKELGIENDVKII-HMDLLEFSNIIRTIE- 72 (345)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEECSCCSTTTTHHHHHTTCTTTEEEC-CCCTTCHHHHHHHHH-
T ss_pred CCEEEEEC-CCChHHHHHHHHHHH-------CCCEEEEEECCCcccccccHhhccccCceeEE-ECCCCCHHHHHHHHH-
Confidence 56788777 468888888876642 235899999875211 1257788 899999765443332
Q ss_pred hCCCCccEEEeCCCC
Q psy1489 132 LKDDKLDVVLSDMAP 146 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~ 146 (229)
+..+|+|+..+..
T Consensus 73 --~~~~d~vih~A~~ 85 (345)
T 2z1m_A 73 --KVQPDEVYNLAAQ 85 (345)
T ss_dssp --HHCCSEEEECCCC
T ss_pred --hcCCCEEEECCCC
Confidence 2258999987754
No 418
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.43 E-value=2.1 Score=34.47 Aligned_cols=114 Identities=15% Similarity=0.073 Sum_probs=64.2
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.|+++|-.|++ |+++..+++++.. ...+|+.++..... .-..+.++ +.|+++.+....+.
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~-------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~ 87 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGR-------LGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI-KADIRQVPEIVKLF 87 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHH-------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTSHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-------CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE-EcCCCCHHHHHHHH
Confidence 46788888865 5667777766542 23578887765311 11356778 99999976444332
Q ss_pred HHhC--CCCccEEEeCCCCCCCC-CCcccH--HH-HHH----HHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILK--DDKLDVVLSDMAPNATG-MREMDH--DL-ITQ----LAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~--~~~~D~V~sd~~~~~~g-~~~~d~--~~-~~~----~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+... -+..|+++.++.....+ ..+.+. +. .++ -....++.+...++++|++|.-
T Consensus 88 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 151 (270)
T 3is3_A 88 DQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLT 151 (270)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 2111 13689999987643211 111121 11 111 1123456677778889988763
No 419
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=90.34 E-value=0.12 Score=44.15 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=53.1
Q ss_pred CCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCC---CCC--C--CCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 62 GLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP---IYP--I--DGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 62 g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~---~~~--~--~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
|++||-+|+|+ |..+..+++..| .+|+++|.++ -.. . -++..+ | .+ +..+.+.+ ..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G----------a~Vi~~~~~~~~~~~~~~~~~~ga~~v---~-~~-~~~~~~~~-~~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG----------LEVWMANRREPTEVEQTVIEETKTNYY---N-SS-NGYDKLKD-SV 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT----------CEEEEEESSCCCHHHHHHHHHHTCEEE---E-CT-TCSHHHHH-HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC----------CEEEEEeCCccchHHHHHHHHhCCcee---c-hH-HHHHHHHH-hC
Confidence 89999999844 444555555543 4999999875 210 0 133322 3 33 32233433 22
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHH-HHHHHcccCCCEEEEe
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVI-RFAVTYSKPGADCLIK 183 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l-~~~~~~LkpgG~~v~~ 183 (229)
..+|+|+..... . ..+ ..+.+.|+++|++++.
T Consensus 245 -~~~d~vid~~g~-----~------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 245 -GKFDVIIDATGA-----D------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp -CCEEEEEECCCC-----C------------THHHHHHGGGEEEEEEEEEC
T ss_pred -CCCCEEEECCCC-----h------------HHHHHHHHHHHhcCCEEEEE
Confidence 579999975421 1 134 6688999999998864
No 420
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.93 E-value=0.14 Score=43.34 Aligned_cols=92 Identities=21% Similarity=0.235 Sum_probs=51.7
Q ss_pred cCCCCeeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---CCCCCCe-EEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---YPIDGAV-VLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---~~~~~~~-~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-.|+ |+ |.++..+++.. ...+|++++...- .. .++. ++ | .+.+..+.+.+.
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~---------g~~~V~~~~~~~~~~~~~-~ga~~~~---~-~~~~~~~~~~~~- 204 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTV---------PNVTVFGTASTFKHEAIK-DSVTHLF---D-RNADYVQEVKRI- 204 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTS---------TTCEEEEEECGGGHHHHG-GGSSEEE---E-TTSCHHHHHHHH-
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHc---------CCcEEEEeCCHHHHHHHH-cCCcEEE---c-CCccHHHHHHHh-
Confidence 578999999998 43 44444555443 2358888884320 11 2232 23 2 333344445543
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.++.+|+|+-.. |. ..+..+.+.|+++|++++.
T Consensus 205 ~~~g~Dvv~d~~-----g~-------------~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 205 SAEGVDIVLDCL-----CG-------------DNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp CTTCEEEEEEEC-----C--------------------CTTEEEEEEEEEE
T ss_pred cCCCceEEEECC-----Cc-------------hhHHHHHHHhhcCCEEEEE
Confidence 356899999633 11 1124578899999999864
No 421
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.63 E-value=0.23 Score=42.27 Aligned_cols=91 Identities=14% Similarity=0.104 Sum_probs=52.7
Q ss_pred cC-CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--C---CCCCeEEecCCCCChhHHHHHHHH
Q psy1489 59 LR-PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--P---IDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 59 ~~-~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--~---~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
+. +|++||-+|+|+ |..+..+++..+ .+|+++|.++-. . --++..+ .|..+.+ .+.+.
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~G----------a~Vi~~~~~~~~~~~~~~~lGa~~v--~~~~~~~---~~~~~ 248 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFG----------SKVTVISTSPSKKEEALKNFGADSF--LVSRDQE---QMQAA 248 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT----------CEEEEEESCGGGHHHHHHTSCCSEE--EETTCHH---HHHHT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC----------CEEEEEeCCHHHHHHHHHhcCCceE--EeccCHH---HHHHh
Confidence 34 899999999765 555555555543 589999987611 0 1122221 2333322 23332
Q ss_pred hCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 132 LKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
. +.+|+|+.... ... .+..+.+.|+++|+++..
T Consensus 249 ~--~~~D~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 249 A--GTLDGIIDTVS-----AVH------------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp T--TCEEEEEECCS-----SCC------------CSHHHHHHEEEEEEEEEC
T ss_pred h--CCCCEEEECCC-----cHH------------HHHHHHHHHhcCCEEEEE
Confidence 2 36999997432 110 123467789999998864
No 422
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.60 E-value=0.86 Score=36.51 Aligned_cols=113 Identities=11% Similarity=0.033 Sum_probs=64.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CC-----CCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YP-----IDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~-----~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.|+++|-.|++ |+++..+++.+.. ...+|+.+|.++- .. -..+.++ ..|+.+.+....+.+...
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVE-------GGAEVLLTGRNESNIARIREEFGPRVHAL-RSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHGGGEEEE-ECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHHhCCcceEE-EccCCCHHHHHHHHHHHH
Confidence 46788888855 5677777766542 2358999998751 11 1246778 899999765443332211
Q ss_pred --CCCccEEEeCCCCCCCC-CCcccH--HH-HHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 134 --DDKLDVVLSDMAPNATG-MREMDH--DL-ITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 134 --~~~~D~V~sd~~~~~~g-~~~~d~--~~-~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
-+..|+++.++.....+ ..+.+. +. .++ -....++.+...++++|+++.
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 136 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVF 136 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEE
Confidence 14799999987542211 111111 11 111 111344556667777888775
No 423
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=89.41 E-value=5.9 Score=32.90 Aligned_cols=72 Identities=13% Similarity=-0.007 Sum_probs=44.9
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-------C--------CCCCeEEecCCCCChhHHHH
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-------P--------IDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-------~--------~~~~~~~~~~D~~~~~~~~~ 127 (229)
++||-.| |+|.++..+++.+.. ...+|++++.++-. . -.++.++ .+|+.+.+....
T Consensus 2 ~~vlVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~ 72 (372)
T 1db3_A 2 KVALITG-VTGQDGSYLAEFLLE-------KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH-YGDLSDTSNLTR 72 (372)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEECC---------------------CCEEEC-CCCSSCHHHHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHH-------CCCEEEEEECCCcccchHHHHHHhhccccCCCceEEE-ECCCCCHHHHHH
Confidence 4677666 468888888876642 22589999876411 1 1356778 899999765443
Q ss_pred HHHHhCCCCccEEEeCCCC
Q psy1489 128 LVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 128 i~~~~~~~~~D~V~sd~~~ 146 (229)
+.. +..+|+|+..+..
T Consensus 73 ~~~---~~~~d~vih~A~~ 88 (372)
T 1db3_A 73 ILR---EVQPDEVYNLGAM 88 (372)
T ss_dssp HHH---HHCCSEEEECCCC
T ss_pred HHH---hcCCCEEEECCcc
Confidence 332 2258999987764
No 424
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=89.40 E-value=3 Score=33.57 Aligned_cols=76 Identities=22% Similarity=0.260 Sum_probs=47.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhC--CCCcc
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILK--DDKLD 138 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~~~D 138 (229)
.|++||-.|++ |+++..+++.+.. ...+|+.+|.+. ........+ .+|+.+......+.+.+. -+..|
T Consensus 27 ~gk~vlVTGas-~gIG~aia~~la~-------~G~~V~~~~r~~-~~~~~~~~~-~~Dv~~~~~~~~~~~~~~~~~g~iD 96 (266)
T 3uxy_A 27 EGKVALVTGAA-GGIGGAVVTALRA-------AGARVAVADRAV-AGIAADLHL-PGDLREAAYADGLPGAVAAGLGRLD 96 (266)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH-------TTCEEEECSSCC-TTSCCSEEC-CCCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-------CCCEEEEEeCCH-HHHHhhhcc-CcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 46778877754 6677777766542 235899998876 333344555 789998764443322111 14699
Q ss_pred EEEeCCCC
Q psy1489 139 VVLSDMAP 146 (229)
Q Consensus 139 ~V~sd~~~ 146 (229)
+++.++..
T Consensus 97 ~lvnnAg~ 104 (266)
T 3uxy_A 97 IVVNNAGV 104 (266)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998764
No 425
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.02 E-value=4.6 Score=32.49 Aligned_cols=114 Identities=12% Similarity=0.061 Sum_probs=64.3
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-----------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-----------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-----------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.++++|-.|++ |+++..+++.+.. ...+|+.++..... .-..+.++ .+|+.+.+....+.
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~-------~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~ 100 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLAL-------EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI-RADNRDAEAIEQAI 100 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH-------CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHHHH
Confidence 46788888865 5667776766542 23578888665311 01346678 89999976444332
Q ss_pred HHhC--CCCccEEEeCCCCCCCC-CCccc--HHH-HHH----HHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILK--DDKLDVVLSDMAPNATG-MREMD--HDL-ITQ----LAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~--~~~~D~V~sd~~~~~~g-~~~~d--~~~-~~~----~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
+... -+..|+++.++.....+ ..+.+ .+. .++ -....++.+...++++|.+|.-
T Consensus 101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 101 RETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 2111 13699999987642211 11111 111 111 1123456677778888988753
No 426
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=88.98 E-value=4.7 Score=31.32 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=49.1
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCC--cEEEEEeCCCCC-----C--CCCCeEEecCCCCChhHHHHHHHH-
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPK--GLVLSVDKLPIY-----P--IDGAVVLSKCDFTQPDIQDRLVTI- 131 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~--~~v~gvD~~~~~-----~--~~~~~~~~~~D~~~~~~~~~i~~~- 131 (229)
+.+||-.|+ +|+++..+++.+.. .. .+|++++.++.. . -.++.++ .+|+++.+....+.+.
T Consensus 3 ~k~vlItGa-sggiG~~la~~l~~-------~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~-~~D~~~~~~~~~~~~~~ 73 (250)
T 1yo6_A 3 PGSVVVTGA-NRGIGLGLVQQLVK-------DKNIRHIIATARDVEKATELKSIKDSRVHVL-PLTVTCDKSLDTFVSKV 73 (250)
T ss_dssp CSEEEESSC-SSHHHHHHHHHHHT-------CTTCCEEEEEESSGGGCHHHHTCCCTTEEEE-ECCTTCHHHHHHHHHHH
T ss_pred CCEEEEecC-CchHHHHHHHHHHh-------cCCCcEEEEEecCHHHHHHHHhccCCceEEE-EeecCCHHHHHHHHHHH
Confidence 467787775 57888888887752 22 589999887511 1 2356788 9999997644433322
Q ss_pred ---hCCCCccEEEeCCCC
Q psy1489 132 ---LKDDKLDVVLSDMAP 146 (229)
Q Consensus 132 ---~~~~~~D~V~sd~~~ 146 (229)
+....+|+|+.++..
T Consensus 74 ~~~~g~~~id~li~~Ag~ 91 (250)
T 1yo6_A 74 GEIVGSDGLSLLINNAGV 91 (250)
T ss_dssp HHHHGGGCCCEEEECCCC
T ss_pred HHhcCCCCCcEEEECCcc
Confidence 211269999988753
No 427
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=88.93 E-value=6.9 Score=31.37 Aligned_cols=77 Identities=16% Similarity=0.196 Sum_probs=48.6
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--CC---------------CCCeEEecCCCCChh
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--PI---------------DGAVVLSKCDFTQPD 123 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--~~---------------~~~~~~~~~D~~~~~ 123 (229)
.++++|-.|++ |+++..+++.+.. ...+|+.++.+... .. ..+.++ +.|+++.+
T Consensus 5 ~~k~~lVTGas-~GIG~aia~~la~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~ 75 (274)
T 3e03_A 5 SGKTLFITGAS-RGIGLAIALRAAR-------DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL-KCDIREED 75 (274)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-------TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEE-ECCTTCHH
T ss_pred CCcEEEEECCC-ChHHHHHHHHHHH-------CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEE-eCCCCCHH
Confidence 46788888876 5666666665542 23589999887521 11 135677 89999976
Q ss_pred HHHHHHHHhC--CCCccEEEeCCCC
Q psy1489 124 IQDRLVTILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 124 ~~~~i~~~~~--~~~~D~V~sd~~~ 146 (229)
....+.+.+. -+..|+++.++..
T Consensus 76 ~v~~~~~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 76 QVRAAVAATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 5443332221 1479999998764
No 428
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.84 E-value=2.2 Score=36.10 Aligned_cols=70 Identities=21% Similarity=0.153 Sum_probs=47.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--CCC-CCCCeEEecCCCCChhHHHHHHHHhCCCCc
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--IYP-IDGAVVLSKCDFTQPDIQDRLVTILKDDKL 137 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~~~-~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~ 137 (229)
+.++||-||| |..+..+++.+. ....|+..|++. ... .+.+..+ ..|+.+.+... +.+. .+
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~--------~~~~v~~~~~~~~~~~~~~~~~~~~-~~d~~d~~~l~---~~~~--~~ 78 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLK--------DEFDVYIGDVNNENLEKVKEFATPL-KVDASNFDKLV---EVMK--EF 78 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHT--------TTSEEEEEESCHHHHHHHTTTSEEE-ECCTTCHHHHH---HHHT--TC
T ss_pred CccEEEEECC--CHHHHHHHHHHh--------cCCCeEEEEcCHHHHHHHhccCCcE-EEecCCHHHHH---HHHh--CC
Confidence 3478999998 788888888775 446788888875 111 2345666 78988865433 3332 58
Q ss_pred cEEEeCCCC
Q psy1489 138 DVVLSDMAP 146 (229)
Q Consensus 138 D~V~sd~~~ 146 (229)
|+|++-.++
T Consensus 79 DvVi~~~p~ 87 (365)
T 3abi_A 79 ELVIGALPG 87 (365)
T ss_dssp SEEEECCCG
T ss_pred CEEEEecCC
Confidence 999985543
No 429
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.81 E-value=7.9 Score=30.97 Aligned_cols=113 Identities=17% Similarity=0.088 Sum_probs=64.1
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-C---------------------CCCCCeEEecCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-Y---------------------PIDGAVVLSKCD 118 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~---------------------~~~~~~~~~~~D 118 (229)
.|++||--|++ |+++..+++.+.. ...+|+.+|.+.- . .-..+.++ ..|
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~-------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D 79 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAE-------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTA-EVD 79 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEE-ECC
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-------CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEE-Ecc
Confidence 46788888865 5666676766542 2358999988620 0 01246677 899
Q ss_pred CCChhHHHHHHHHhC--CCCccEEEeCCCCCCCCCC-cccHHH-HHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 119 FTQPDIQDRLVTILK--DDKLDVVLSDMAPNATGMR-EMDHDL-ITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 119 ~~~~~~~~~i~~~~~--~~~~D~V~sd~~~~~~g~~-~~d~~~-~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
+.+.+....+.+.+. -+..|+++.++.....+.. ..+.+. .++ -....++.+...++.+|.++.
T Consensus 80 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 151 (287)
T 3pxx_A 80 VRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIIT 151 (287)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEE
Confidence 999765443322111 1379999998764322211 112221 111 112345566677788888775
No 430
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=88.76 E-value=1.1 Score=37.90 Aligned_cols=102 Identities=13% Similarity=0.131 Sum_probs=63.6
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--------C-----------------------CC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--------P-----------------------ID 109 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--------~-----------------------~~ 109 (229)
+...|+.||||.......+.... +..+++-||.-.+. . .+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~---------~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~ 167 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMF---------PHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQG 167 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHC---------TTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECS
T ss_pred CCcEEEEeCCCCccHHHHhcCcC---------CCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCC
Confidence 45789999999999998887653 34678888873210 0 14
Q ss_pred CCeEEecCCCCChhHHHHHHHHh-CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 110 GAVVLSKCDFTQPDIQDRLVTIL-KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 110 ~~~~~~~~D~~~~~~~~~i~~~~-~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
+...+ .+|+++.+....+.... +.....++++-+.. ...+. +....++..+.... |+|.+++
T Consensus 168 ~~~~v-~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL-----~YL~~----~~~~~ll~~ia~~~-~~~~~v~ 230 (334)
T 1rjd_A 168 RYKLA-ACDLNDITETTRLLDVCTKREIPTIVISECLL-----CYMHN----NESQLLINTIMSKF-SHGLWIS 230 (334)
T ss_dssp SEEEE-ECCTTCHHHHHHHHHTTCCTTSCEEEEEESCG-----GGSCH----HHHHHHHHHHHHHC-SSEEEEE
T ss_pred ceEEE-ecCCCCcHHHHHHHHhcCCCCCCEEEEEcchh-----hCCCH----HHHHHHHHHHHhhC-CCcEEEE
Confidence 56788 89999976544432223 23456788875532 11122 23445666666655 7888763
No 431
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=88.71 E-value=3 Score=34.64 Aligned_cols=72 Identities=14% Similarity=0.050 Sum_probs=49.5
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--C-------CCCCeEEecCCCCChhHHHHHHHHh
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--P-------IDGAVVLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--~-------~~~~~~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++||-.| |+|.++..+++.+.. ...+|++++.++-. . ..++.++ .+|+.+......+..
T Consensus 9 ~~~vlVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~-- 77 (357)
T 1rkx_A 9 GKRVFVTG-HTGFKGGWLSLWLQT-------MGATVKGYSLTAPTVPSLFETARVADGMQSE-IGDIRDQNKLLESIR-- 77 (357)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEESSCSSSSCHHHHTTTTTTSEEE-ECCTTCHHHHHHHHH--
T ss_pred CCEEEEEC-CCchHHHHHHHHHHh-------CCCeEEEEeCCCcccchhhHhhccCCceEEE-EccccCHHHHHHHHH--
Confidence 57888877 678888888876642 23589999987521 1 2367888 999999765443332
Q ss_pred CCCCccEEEeCCC
Q psy1489 133 KDDKLDVVLSDMA 145 (229)
Q Consensus 133 ~~~~~D~V~sd~~ 145 (229)
+..+|+|+..+.
T Consensus 78 -~~~~d~vih~A~ 89 (357)
T 1rkx_A 78 -EFQPEIVFHMAA 89 (357)
T ss_dssp -HHCCSEEEECCS
T ss_pred -hcCCCEEEECCC
Confidence 125899998765
No 432
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.67 E-value=0.038 Score=46.35 Aligned_cols=91 Identities=18% Similarity=0.156 Sum_probs=52.3
Q ss_pred cCCCC-eeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCC-----CCe-EEecCCCCChhHHHHHH
Q psy1489 59 LRPGL-KVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPID-----GAV-VLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 59 ~~~g~-~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~-----~~~-~~~~~D~~~~~~~~~i~ 129 (229)
+++|+ +||-.|+ |+ |..+..+++..+ .+|++++.++- ..+ ++. ++ |..+.+ ...+
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G----------a~vi~~~~~~~-~~~~~~~lGa~~v~---~~~~~~-~~~~- 210 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRG----------YDVVASTGNRE-AADYLKQLGASEVI---SREDVY-DGTL- 210 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHT----------CCEEEEESSSS-THHHHHHHTCSEEE---EHHHHC-SSCC-
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCC----------CEEEEEeCCHH-HHHHHHHcCCcEEE---ECCCch-HHHH-
Confidence 45675 8999998 55 666777777664 57999998751 111 121 11 100000 0000
Q ss_pred HHhCCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 130 TILKDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 130 ~~~~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+.+..+|+|+... |. ..+..+.+.|+++|++++.
T Consensus 211 ~~~~~~~~d~vid~~-----g~-------------~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 211 KALSKQQWQGAVDPV-----GG-------------KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CSSCCCCEEEEEESC-----CT-------------HHHHHHHTTEEEEEEEEEC
T ss_pred HHhhcCCccEEEECC-----cH-------------HHHHHHHHhhcCCCEEEEE
Confidence 012234699998743 21 1355688899999999864
No 433
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=88.56 E-value=5.1 Score=32.10 Aligned_cols=77 Identities=14% Similarity=0.080 Sum_probs=48.6
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------C-----------CCCCCeEEecCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------Y-----------PIDGAVVLSKCD 118 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~-----------~~~~~~~~~~~D 118 (229)
.|++||-.|++ |+++..+++.+.. ...+|+.+|.+.- . .-..+.++ ++|
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D 82 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAA-------DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVAR-QAD 82 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEE-ECC
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH-------CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEE-eCC
Confidence 46788888854 6677777766542 2358999987620 0 01246778 899
Q ss_pred CCChhHHHHHHHHhC--CCCccEEEeCCCC
Q psy1489 119 FTQPDIQDRLVTILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 119 ~~~~~~~~~i~~~~~--~~~~D~V~sd~~~ 146 (229)
+++.+....+.+... -+..|+++.++..
T Consensus 83 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 83 VRDRESLSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 999765443332111 1469999998864
No 434
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=88.56 E-value=0.54 Score=50.04 Aligned_cols=92 Identities=16% Similarity=0.086 Sum_probs=0.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCc----EEEEEeCCC--CCCCC------CCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKG----LVLSVDKLP--IYPID------GAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~----~v~gvD~~~--~~~~~------~~~~~~~~D~~~~~~~~~i 128 (229)
+..+||++|.|+|+.+..+.+.++ ... ..+-.|+++ ..... ++..- .-|..+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~--------~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~-~~d~~~------- 1303 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLN--------TQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQG-QWDPAN------- 1303 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTT--------TSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEE-CCCSSC-------
T ss_pred CCceEEEECCCccHHHHHHHHhhc--------ccCcccceEEEecCChHHHHHHHHHhhhcccccc-cccccc-------
Q ss_pred HHHh---CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEE
Q psy1489 129 VTIL---KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 129 ~~~~---~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~ 182 (229)
. ....||+|++ .+...........+..+.++|+|||.+++
T Consensus 1304 ---~~~~~~~~ydlvia-----------~~vl~~t~~~~~~l~~~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1304 ---PAPGSLGKADLLVC-----------NCALATLGDPAVAVGNMAATLKEGGFLLL 1346 (2512)
T ss_dssp ---CCC-----CCEEEE-----------ECC--------------------CCEEEE
T ss_pred ---cccCCCCceeEEEE-----------cccccccccHHHHHHHHHHhcCCCcEEEE
No 435
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=88.16 E-value=5.2 Score=32.72 Aligned_cols=73 Identities=22% Similarity=0.243 Sum_probs=47.2
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-------CC---CCCCeEEecCCCCChhHHHHHHHH
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-------YP---IDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-------~~---~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
+++||-.| |+|.++..+++.+...+ ...+|+++|.++. .. ..++.++ .+|+++......+
T Consensus 3 ~m~vlVTG-atG~iG~~l~~~L~~~g-----~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~--- 72 (336)
T 2hun_A 3 SMKLLVTG-GMGFIGSNFIRYILEKH-----PDWEVINIDKLGYGSNPANLKDLEDDPRYTFV-KGDVADYELVKEL--- 72 (336)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHHC-----TTCEEEEEECCCTTCCGGGGTTTTTCTTEEEE-ECCTTCHHHHHHH---
T ss_pred CCeEEEEC-CCchHHHHHHHHHHHhC-----CCCEEEEEecCcccCchhHHhhhccCCceEEE-EcCCCCHHHHHHH---
Confidence 45788777 56888888877663110 1258999987531 11 2357788 8999997644333
Q ss_pred hCCCCccEEEeCCCC
Q psy1489 132 LKDDKLDVVLSDMAP 146 (229)
Q Consensus 132 ~~~~~~D~V~sd~~~ 146 (229)
+ ..+|+|+..+..
T Consensus 73 ~--~~~d~vih~A~~ 85 (336)
T 2hun_A 73 V--RKVDGVVHLAAE 85 (336)
T ss_dssp H--HTCSEEEECCCC
T ss_pred h--hCCCEEEECCCC
Confidence 3 368999987754
No 436
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=88.12 E-value=3.4 Score=33.05 Aligned_cols=77 Identities=18% Similarity=0.124 Sum_probs=48.9
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC---C--CCCCeEEecCCCCChhHHHHHHHHhC--
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY---P--IDGAVVLSKCDFTQPDIQDRLVTILK-- 133 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~---~--~~~~~~~~~~D~~~~~~~~~i~~~~~-- 133 (229)
.+++||-.|++ |+++..+++.+.. ...+|+.+|.++-. . -.++.++ .+|+.+.+....+.+.+.
T Consensus 26 ~~k~vlVTGas-~gIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~ 96 (260)
T 3gem_A 26 SSAPILITGAS-QRVGLHCALRLLE-------HGHRVIISYRTEHASVTELRQAGAVAL-YGDFSCETGIMAFIDLLKTQ 96 (260)
T ss_dssp -CCCEEESSTT-SHHHHHHHHHHHH-------TTCCEEEEESSCCHHHHHHHHHTCEEE-ECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-------CCCEEEEEeCChHHHHHHHHhcCCeEE-ECCCCCHHHHHHHHHHHHHh
Confidence 35678877754 6677777776642 23589999987621 0 1247788 999999765443332211
Q ss_pred CCCccEEEeCCCC
Q psy1489 134 DDKLDVVLSDMAP 146 (229)
Q Consensus 134 ~~~~D~V~sd~~~ 146 (229)
-+..|+++.++..
T Consensus 97 ~g~iD~lv~nAg~ 109 (260)
T 3gem_A 97 TSSLRAVVHNASE 109 (260)
T ss_dssp CSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2479999998864
No 437
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.12 E-value=6.1 Score=32.15 Aligned_cols=113 Identities=14% Similarity=0.048 Sum_probs=64.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC----C--------CCCCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI----Y--------PIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~----~--------~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.+++||-.|+ +|+++..+++.+.. ...+|+.+|.+.- . .-..+.++ .+|+.+.+....+
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~-------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~ 118 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAR-------EGADVAINYLPAEEEDAQQVKALIEECGRKAVLL-PGDLSDESFARSL 118 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-------TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEEC-CCCTTSHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-------CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEE-EecCCCHHHHHHH
Confidence 4678888885 46677777776642 2358888887621 0 01356777 8999997644433
Q ss_pred HHHhC--CCCccEEEeCCCCCC--CCCCcccH--HH-HHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 129 VTILK--DDKLDVVLSDMAPNA--TGMREMDH--DL-ITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 129 ~~~~~--~~~~D~V~sd~~~~~--~g~~~~d~--~~-~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
.+.+. -+..|+++.++.... ....+.+. +. .++ -...+++.+...++++|++|.
T Consensus 119 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 119 VHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 22211 147899999876421 11112221 11 111 112455666777888898875
No 438
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=87.94 E-value=8.5 Score=30.98 Aligned_cols=76 Identities=13% Similarity=0.125 Sum_probs=50.2
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhC--CCCcc
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILK--DDKLD 138 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~~~D 138 (229)
+|+++|--|++. ++...+++.+.. ...+|+.+|.+.........++ ++|+++.+....+.+... -+..|
T Consensus 10 ~GK~alVTGas~-GIG~aia~~la~-------~Ga~V~~~~r~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~G~iD 80 (261)
T 4h15_A 10 RGKRALITAGTK-GAGAATVSLFLE-------LGAQVLTTARARPEGLPEELFV-EADLTTKEGCAIVAEATRQRLGGVD 80 (261)
T ss_dssp TTCEEEESCCSS-HHHHHHHHHHHH-------TTCEEEEEESSCCTTSCTTTEE-ECCTTSHHHHHHHHHHHHHHTSSCS
T ss_pred CCCEEEEeccCc-HHHHHHHHHHHH-------cCCEEEEEECCchhCCCcEEEE-EcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578888888665 456666655532 2368999998765555555677 899999875544332211 24799
Q ss_pred EEEeCCC
Q psy1489 139 VVLSDMA 145 (229)
Q Consensus 139 ~V~sd~~ 145 (229)
+++.++.
T Consensus 81 ilVnnAG 87 (261)
T 4h15_A 81 VIVHMLG 87 (261)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998865
No 439
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=87.85 E-value=4.8 Score=32.73 Aligned_cols=76 Identities=12% Similarity=0.128 Sum_probs=48.4
Q ss_pred cCCCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCcc
Q psy1489 59 LRPGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLD 138 (229)
Q Consensus 59 ~~~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D 138 (229)
.++..+||-.| |+|.++..+++.+.. ...+|++++.++-....++.++ .+|+++......+ +.+..+|
T Consensus 9 ~~~~~~vlVTG-atG~iG~~l~~~L~~-------~G~~V~~~~r~~~~~~l~~~~~-~~Dl~d~~~~~~~---~~~~~~d 76 (321)
T 2pk3_A 9 HHGSMRALITG-VAGFVGKYLANHLTE-------QNVEVFGTSRNNEAKLPNVEMI-SLDIMDSQRVKKV---ISDIKPD 76 (321)
T ss_dssp ----CEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEESCTTCCCTTEEEE-ECCTTCHHHHHHH---HHHHCCS
T ss_pred ccCcceEEEEC-CCChHHHHHHHHHHH-------CCCEEEEEecCCccccceeeEE-ECCCCCHHHHHHH---HHhcCCC
Confidence 44556777665 578888888876642 2358999998762110167788 8999997654433 2224689
Q ss_pred EEEeCCCC
Q psy1489 139 VVLSDMAP 146 (229)
Q Consensus 139 ~V~sd~~~ 146 (229)
+|+..+..
T Consensus 77 ~vih~A~~ 84 (321)
T 2pk3_A 77 YIFHLAAK 84 (321)
T ss_dssp EEEECCSC
T ss_pred EEEEcCcc
Confidence 99987754
No 440
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=87.80 E-value=9.3 Score=30.57 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=51.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHhCCCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTILKDDK 136 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~ 136 (229)
.|+.+|--|++.| +...+++++.. ...+|+.+|+++- . .-..+..+ +.|+++.+..+.+.+.+ ++
T Consensus 10 ~GK~alVTGas~G-IG~aia~~la~-------~Ga~Vv~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~--g~ 78 (242)
T 4b79_A 10 AGQQVLVTGGSSG-IGAAIAMQFAE-------LGAEVVALGLDADGVHAPRHPRIRRE-ELDITDSQRLQRLFEAL--PR 78 (242)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH-------TTCEEEEEESSTTSTTSCCCTTEEEE-ECCTTCHHHHHHHHHHC--SC
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHH-------CCCEEEEEeCCHHHHhhhhcCCeEEE-EecCCCHHHHHHHHHhc--CC
Confidence 4788888887765 55555555532 2368999998861 1 12356777 89999987666665555 47
Q ss_pred ccEEEeCCCC
Q psy1489 137 LDVVLSDMAP 146 (229)
Q Consensus 137 ~D~V~sd~~~ 146 (229)
.|+++.++..
T Consensus 79 iDiLVNNAGi 88 (242)
T 4b79_A 79 LDVLVNNAGI 88 (242)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998753
No 441
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=87.75 E-value=8 Score=32.12 Aligned_cols=75 Identities=20% Similarity=0.158 Sum_probs=50.3
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------------C-----CCCCCeEEecCCCCChh
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------------Y-----PIDGAVVLSKCDFTQPD 123 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------------~-----~~~~~~~~~~~D~~~~~ 123 (229)
.+++||-.| |+|.++..+++.+...+ ...+|+++|.++- . .-.++.++ .+|+++.+
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~ 81 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQENH-----PKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVI-AADINNPL 81 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHC-----TTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEE-ECCTTCHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHhhC-----CCCeEEEEECCCccccccccchhhhhhhhhccccCceEE-ECCCCCHH
Confidence 467888887 67888888887764100 1358999987541 1 11246788 99999976
Q ss_pred HHHHHHHHhCCCCccEEEeCCCC
Q psy1489 124 IQDRLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 124 ~~~~i~~~~~~~~~D~V~sd~~~ 146 (229)
....+ ....+|+|+..+..
T Consensus 82 ~~~~~----~~~~~D~vih~A~~ 100 (362)
T 3sxp_A 82 DLRRL----EKLHFDYLFHQAAV 100 (362)
T ss_dssp HHHHH----TTSCCSEEEECCCC
T ss_pred HHHHh----hccCCCEEEECCcc
Confidence 55443 23579999987753
No 442
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.73 E-value=7.6 Score=30.25 Aligned_cols=94 Identities=10% Similarity=0.086 Sum_probs=57.5
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC----CCCCCCeEEecCCCCChhHHHHHHHHhCCCCc
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI----YPIDGAVVLSKCDFTQPDIQDRLVTILKDDKL 137 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~----~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~ 137 (229)
..+|+=+|+ |.++..+++.+. ..+.|+++|.++- .. .++.++ .+|.++++.... ..-..+
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~--------~~g~v~vid~~~~~~~~~~-~~~~~i-~gd~~~~~~l~~----a~i~~a 72 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELR--------GSEVFVLAEDENVRKKVLR-SGANFV-HGDPTRVSDLEK----ANVRGA 72 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHST--------TSEEEEEESCGGGHHHHHH-TTCEEE-ESCTTCHHHHHH----TTCTTC
T ss_pred CCEEEEECC--ChHHHHHHHHHH--------hCCeEEEEECCHHHHHHHh-cCCeEE-EcCCCCHHHHHh----cCcchh
Confidence 457887877 678888888764 2233899998761 12 578888 999998764332 222468
Q ss_pred cEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 138 DVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 138 D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
|+|++.... .... ..+....+.+.|+..++..+.
T Consensus 73 d~vi~~~~~---------d~~n-----~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 73 RAVIVDLES---------DSET-----IHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp SEEEECCSC---------HHHH-----HHHHHHHHHHCSSSEEEEECS
T ss_pred cEEEEcCCC---------cHHH-----HHHHHHHHHHCCCCeEEEEEC
Confidence 999984421 1111 122334455677767776653
No 443
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=87.63 E-value=2.5 Score=34.19 Aligned_cols=74 Identities=14% Similarity=0.115 Sum_probs=47.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CC---------CCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YP---------IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~---------~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.+.+||-.|+ +|+++..+++.+.. ...+|++++.++- .. ...+.++ .+|+++.+....+.
T Consensus 27 ~~k~vlITGa-sggIG~~la~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~ 97 (286)
T 1xu9_A 27 QGKKVIVTGA-SKGIGREMAYHLAK-------MGAHVVVTARSKETLQKVVSHCLELGAASAHYI-AGTMEDMTFAEQFV 97 (286)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEE-ECCTTCHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-------CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEE-eCCCCCHHHHHHHH
Confidence 4678888885 46777777776542 2358999998751 10 1246778 89999976444332
Q ss_pred HHhC--CCCccEEEeC
Q psy1489 130 TILK--DDKLDVVLSD 143 (229)
Q Consensus 130 ~~~~--~~~~D~V~sd 143 (229)
+.+. -+.+|+++.+
T Consensus 98 ~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 98 AQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHTSCSEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 2111 1369999987
No 444
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=87.55 E-value=2.2 Score=33.44 Aligned_cols=70 Identities=11% Similarity=0.074 Sum_probs=42.6
Q ss_pred eeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccEEEeC
Q psy1489 64 KVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVLSD 143 (229)
Q Consensus 64 ~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd 143 (229)
+||-.|+ +|+++..+++.+.. ...+|+++|.++- .... .+ .+|+.+......+.+.+ .+.+|+|+.+
T Consensus 3 ~vlVtGa-sg~iG~~l~~~L~~-------~g~~V~~~~r~~~-~~~~--~~-~~D~~~~~~~~~~~~~~-~~~~d~vi~~ 69 (255)
T 2dkn_A 3 VIAITGS-ASGIGAALKELLAR-------AGHTVIGIDRGQA-DIEA--DL-STPGGRETAVAAVLDRC-GGVLDGLVCC 69 (255)
T ss_dssp EEEEETT-TSHHHHHHHHHHHH-------TTCEEEEEESSSS-SEEC--CT-TSHHHHHHHHHHHHHHH-TTCCSEEEEC
T ss_pred EEEEeCC-CcHHHHHHHHHHHh-------CCCEEEEEeCChh-Hccc--cc-cCCcccHHHHHHHHHHc-CCCccEEEEC
Confidence 4666664 57888888876642 2358999998762 1111 14 67776655443333323 2479999998
Q ss_pred CCC
Q psy1489 144 MAP 146 (229)
Q Consensus 144 ~~~ 146 (229)
+..
T Consensus 70 Ag~ 72 (255)
T 2dkn_A 70 AGV 72 (255)
T ss_dssp CCC
T ss_pred CCC
Confidence 754
No 445
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=87.46 E-value=0.21 Score=41.67 Aligned_cols=89 Identities=19% Similarity=0.163 Sum_probs=52.9
Q ss_pred cCCCCeeEeec-CCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-CCC--CCCe-EEecCCCCChhHHHHHHHHh
Q psy1489 59 LRPGLKVLDCG-AAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-YPI--DGAV-VLSKCDFTQPDIQDRLVTIL 132 (229)
Q Consensus 59 ~~~g~~VLDlG-cGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-~~~--~~~~-~~~~~D~~~~~~~~~i~~~~ 132 (229)
+++|++||-+| +|+ |.++..+++..+ .+|++++..+- ... -++. ++ |..+.+. +.+.+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~G----------a~vi~~~~~~~~~~~~~lGa~~~i---~~~~~~~---~~~~~ 213 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKG----------TTVITTASKRNHAFLKALGAEQCI---NYHEEDF---LLAIS 213 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT----------CEEEEEECHHHHHHHHHHTCSEEE---ETTTSCH---HHHCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcC----------CEEEEEeccchHHHHHHcCCCEEE---eCCCcch---hhhhc
Confidence 57899999996 777 777777777754 58888874321 000 1222 22 2222210 11112
Q ss_pred CCCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 133 KDDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 133 ~~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
..+|+|+-.. | . ..+..+.+.|+++|++++.
T Consensus 214 --~g~D~v~d~~-----g-----~--------~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 214 --TPVDAVIDLV-----G-----G--------DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp --SCEEEEEESS-----C-----H--------HHHHHHGGGEEEEEEEEEC
T ss_pred --cCCCEEEECC-----C-----c--------HHHHHHHHhccCCCEEEEe
Confidence 4699999733 2 1 1235688999999999863
No 446
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=87.27 E-value=7.6 Score=31.06 Aligned_cols=76 Identities=12% Similarity=0.122 Sum_probs=48.7
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--C--CCCCCCeEEecCCCCChhHHHHHHHHhC--CC
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--I--YPIDGAVVLSKCDFTQPDIQDRLVTILK--DD 135 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~--~~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~ 135 (229)
+++||--|++ |+++..+++.+.. ...+|+.++.++ . .....+.++ ..|+++.+....+.+... -+
T Consensus 16 ~k~vlVTGas-~gIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~~~g 86 (266)
T 3p19_A 16 KKLVVITGAS-SGIGEAIARRFSE-------EGHPLLLLARRVERLKALNLPNTLCA-QVDVTDKYTFDTAITRAEKIYG 86 (266)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHH-------TTCCEEEEESCHHHHHTTCCTTEEEE-ECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-------CCCEEEEEECCHHHHHHhhcCCceEE-EecCCCHHHHHHHHHHHHHHCC
Confidence 5678877765 6677777766542 235899998874 1 122356778 899999765443332211 13
Q ss_pred CccEEEeCCCC
Q psy1489 136 KLDVVLSDMAP 146 (229)
Q Consensus 136 ~~D~V~sd~~~ 146 (229)
..|+++.++..
T Consensus 87 ~iD~lvnnAg~ 97 (266)
T 3p19_A 87 PADAIVNNAGM 97 (266)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999998764
No 447
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=86.88 E-value=11 Score=30.40 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=49.1
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CCC---------------CCCeEEecCCCCChh
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YPI---------------DGAVVLSKCDFTQPD 123 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~~---------------~~~~~~~~~D~~~~~ 123 (229)
.++++|-.|++ |+++..+++.+.. ...+|+.++.++. ..+ ..+.++ ++|+++.+
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~ 78 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAA-------DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI-VGDIRDGD 78 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHT-------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEE-ECCTTSHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-------CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEE-ECCCCCHH
Confidence 46778888865 5677777776642 2358999988762 111 246677 89999976
Q ss_pred HHHHHHHHhC--CCCccEEEeCCCC
Q psy1489 124 IQDRLVTILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 124 ~~~~i~~~~~--~~~~D~V~sd~~~ 146 (229)
....+.+.+. -+..|+++.++..
T Consensus 79 ~v~~~~~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 79 AVAAAVAKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 5443332211 1379999998764
No 448
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=86.86 E-value=9.8 Score=29.87 Aligned_cols=76 Identities=17% Similarity=0.163 Sum_probs=47.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhC--CCCcc
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILK--DDKLD 138 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~--~~~~D 138 (229)
.+++||-.|+ +|+++..+++.+.. ...+|+.++.++ .....+..+ ..|+.+.+....+.+... -+..|
T Consensus 14 ~~k~vlVTGa-s~gIG~~ia~~l~~-------~G~~V~~~~r~~-~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~g~id 83 (247)
T 1uzm_A 14 VSRSVLVTGG-NRGIGLAIAQRLAA-------DGHKVAVTHRGS-GAPKGLFGV-EVDVTDSDAVDRAFTAVEEHQGPVE 83 (247)
T ss_dssp CCCEEEETTT-TSHHHHHHHHHHHH-------TTCEEEEEESSS-CCCTTSEEE-ECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHH-------CCCEEEEEeCCh-HHHHHhcCe-eccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3567887775 57777777776642 235899998876 233344446 899999765443322111 14689
Q ss_pred EEEeCCCC
Q psy1489 139 VVLSDMAP 146 (229)
Q Consensus 139 ~V~sd~~~ 146 (229)
+++.++..
T Consensus 84 ~lv~~Ag~ 91 (247)
T 1uzm_A 84 VLVSNAGL 91 (247)
T ss_dssp EEEEECSC
T ss_pred EEEECCCC
Confidence 99988754
No 449
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.86 E-value=2.3 Score=37.02 Aligned_cols=97 Identities=20% Similarity=0.220 Sum_probs=59.9
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHhCCCCc
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTILKDDKL 137 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~ 137 (229)
+..|+=+|+ |.++..+++.+.. ....|+++|.++- . ...++.++ .+|.+++++... ..-..+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~-------~g~~vvvId~d~~~v~~~~~~g~~vi-~GDat~~~~L~~----agi~~A 69 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLS-------SGVKMVVLDHDPDHIETLRKFGMKVF-YGDATRMDLLES----AGAAKA 69 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHH-------TTCCEEEEECCHHHHHHHHHTTCCCE-ESCTTCHHHHHH----TTTTTC
T ss_pred CCeEEEECC--CHHHHHHHHHHHH-------CCCCEEEEECCHHHHHHHHhCCCeEE-EcCCCCHHHHHh----cCCCcc
Confidence 356777776 5677777766542 2357999999871 1 12366677 899999875432 233578
Q ss_pred cEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 138 DVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 138 D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
|+|++.... .... ..+....+.+.|...++.....
T Consensus 70 ~~viv~~~~---------~~~n-----~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 70 EVLINAIDD---------PQTN-----LQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp SEEEECCSS---------HHHH-----HHHHHHHHHHCTTCEEEEEESS
T ss_pred CEEEECCCC---------hHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 999884421 2111 2234455667788888776643
No 450
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=86.81 E-value=0.45 Score=40.12 Aligned_cols=66 Identities=17% Similarity=0.131 Sum_probs=43.1
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC------CCCCCeEEecCCCCChhHHHHHHHHhCCC
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY------PIDGAVVLSKCDFTQPDIQDRLVTILKDD 135 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~------~~~~~~~~~~~D~~~~~~~~~i~~~~~~~ 135 (229)
+.+|+||.||.|+++..+... | ...|.++|+++.. ..+.. . .+|+.+... ..+ .
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G---------~~~v~~~e~d~~a~~t~~~N~~~~--~-~~Di~~~~~-----~~~--~ 70 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G---------AECVYSNEWDKYAQEVYEMNFGEK--P-EGDITQVNE-----KTI--P 70 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T---------CEEEEEECCCHHHHHHHHHHHSCC--C-BSCGGGSCG-----GGS--C
T ss_pred CCcEEEECCCcCHHHHHHHHC-C---------CeEEEEEeCCHHHHHHHHHHcCCC--C-cCCHHHcCH-----hhC--C
Confidence 578999999999999887654 2 3478899998611 11221 1 466665321 112 2
Q ss_pred CccEEEeCCCCC
Q psy1489 136 KLDVVLSDMAPN 147 (229)
Q Consensus 136 ~~D~V~sd~~~~ 147 (229)
.+|+|+.+.++.
T Consensus 71 ~~D~l~~gpPCQ 82 (327)
T 2c7p_A 71 DHDILCAGFPCQ 82 (327)
T ss_dssp CCSEEEEECCCT
T ss_pred CCCEEEECCCCC
Confidence 589999987753
No 451
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=86.72 E-value=4.3 Score=33.45 Aligned_cols=72 Identities=17% Similarity=0.057 Sum_probs=46.9
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC------C-----------CCCCeEEecCCCCChhHH
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY------P-----------IDGAVVLSKCDFTQPDIQ 125 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~------~-----------~~~~~~~~~~D~~~~~~~ 125 (229)
++||-.| |+|.++..+++.+.. ...+|+++|.+.-. . -.++.++ .+|+.+.+..
T Consensus 3 ~~vlVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D~~~~~~~ 73 (348)
T 1ek6_A 3 EKVLVTG-GAGYIGSHTVLELLE-------AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE-EMDILDQGAL 73 (348)
T ss_dssp SEEEEET-TTSHHHHHHHHHHHH-------TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEE-ECCTTCHHHH
T ss_pred CEEEEEC-CCCHHHHHHHHHHHH-------CCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEE-ECCCCCHHHH
Confidence 5677776 568888888876642 22579999865311 0 1357888 9999997654
Q ss_pred HHHHHHhCCCCccEEEeCCCC
Q psy1489 126 DRLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~~ 146 (229)
..+.. ...+|+|+..+..
T Consensus 74 ~~~~~---~~~~d~vih~A~~ 91 (348)
T 1ek6_A 74 QRLFK---KYSFMAVIHFAGL 91 (348)
T ss_dssp HHHHH---HCCEEEEEECCSC
T ss_pred HHHHH---hcCCCEEEECCCC
Confidence 43322 2268999987653
No 452
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=86.61 E-value=9.3 Score=32.05 Aligned_cols=72 Identities=15% Similarity=0.041 Sum_probs=49.6
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC----CCCCeEEecCCCCChhHHHHHHHHhCCCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP----IDGAVVLSKCDFTQPDIQDRLVTILKDDK 136 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~----~~~~~~~~~~D~~~~~~~~~i~~~~~~~~ 136 (229)
.+++||-.| |+|.++..+++.+.. ...+|++++.++-.. ..++.++ .+|+.+.+.... .+. .
T Consensus 28 ~~~~vlVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~v~~~-~~Dl~d~~~~~~---~~~--~ 93 (379)
T 2c5a_A 28 ENLKISITG-AGGFIASHIARRLKH-------EGHYVIASDWKKNEHMTEDMFCDEFH-LVDLRVMENCLK---VTE--G 93 (379)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEESSCCSSSCGGGTCSEEE-ECCTTSHHHHHH---HHT--T
T ss_pred cCCeEEEEC-CccHHHHHHHHHHHH-------CCCeEEEEECCCccchhhccCCceEE-ECCCCCHHHHHH---HhC--C
Confidence 457888888 468888888876642 235899999875211 2367888 999999764433 332 6
Q ss_pred ccEEEeCCCC
Q psy1489 137 LDVVLSDMAP 146 (229)
Q Consensus 137 ~D~V~sd~~~ 146 (229)
+|+|+..+..
T Consensus 94 ~d~Vih~A~~ 103 (379)
T 2c5a_A 94 VDHVFNLAAD 103 (379)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECcee
Confidence 8999987654
No 453
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=86.56 E-value=3.8 Score=33.99 Aligned_cols=71 Identities=15% Similarity=0.072 Sum_probs=48.9
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC---------------CCCCeEEecCCCCChhHHH
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP---------------IDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~---------------~~~~~~~~~~D~~~~~~~~ 126 (229)
+++||-.| |+|.++..+++.+.. ...+|++++.++... ..++.++ .+|+.+.....
T Consensus 27 ~~~vlVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~ 97 (352)
T 1sb8_A 27 PKVWLITG-VAGFIGSNLLETLLK-------LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFI-QGDIRNLDDCN 97 (352)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEE-ECCTTSHHHHH
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHH-------CCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEE-ECCCCCHHHHH
Confidence 57899888 578888888876642 235899998865210 1467888 99999975443
Q ss_pred HHHHHhCCCCccEEEeCCCC
Q psy1489 127 RLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~ 146 (229)
..+. .+|+|+..+..
T Consensus 98 ---~~~~--~~d~vih~A~~ 112 (352)
T 1sb8_A 98 ---NACA--GVDYVLHQAAL 112 (352)
T ss_dssp ---HHHT--TCSEEEECCSC
T ss_pred ---HHhc--CCCEEEECCcc
Confidence 3332 68999987653
No 454
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.55 E-value=2.7 Score=31.48 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=53.6
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCC-CcEEEEEeCCCC--C--CCCCCeEEecCCCCChhHHHHHHHHh-CCC
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQP-KGLVLSVDKLPI--Y--PIDGAVVLSKCDFTQPDIQDRLVTIL-KDD 135 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~-~~~v~gvD~~~~--~--~~~~~~~~~~~D~~~~~~~~~i~~~~-~~~ 135 (229)
+.+|+-+|+| ..+..+++.+.. . ...|+++|.++- . ...++.++ .+|..+.+... + . .-.
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~-------~~g~~V~vid~~~~~~~~~~~~g~~~~-~gd~~~~~~l~---~-~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRA-------RYGKISLGIEIREEAAQQHRSEGRNVI-SGDATDPDFWE---R-ILDTG 104 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHH-------HHCSCEEEEESCHHHHHHHHHTTCCEE-ECCTTCHHHHH---T-BCSCC
T ss_pred CCcEEEECCC--HHHHHHHHHHHh-------ccCCeEEEEECCHHHHHHHHHCCCCEE-EcCCCCHHHHH---h-ccCCC
Confidence 5688888875 555555554421 1 257999999861 1 11356667 78888765322 1 2 234
Q ss_pred CccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEee
Q psy1489 136 KLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKI 184 (229)
Q Consensus 136 ~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~ 184 (229)
.+|+|+...+. .... ..+ ....+.+.|++.++...
T Consensus 105 ~ad~vi~~~~~---------~~~~----~~~-~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 105 HVKLVLLAMPH---------HQGN----QTA-LEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CCCEEEECCSS---------HHHH----HHH-HHHHHHTTCCSEEEEEE
T ss_pred CCCEEEEeCCC---------hHHH----HHH-HHHHHHHCCCCEEEEEE
Confidence 68999983321 1111 112 22445567777877654
No 455
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.46 E-value=2.8 Score=33.44 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=48.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---------CC---CCCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---------YP---IDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---------~~---~~~~~~~~~~D~~~~~~~~~i 128 (229)
.+.+||-.|+ +|+++..+++.+.. ...+|+.+|.++- .. -.++.++ .+|+++.+....+
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~D~~~~~~v~~~ 76 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLL-------KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFI-QCDVADQQQLRDT 76 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEE-ECCTTSHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHH-------CCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEE-ecCCCCHHHHHHH
Confidence 3567888885 56777777766542 2358999987641 01 1246677 8999997644333
Q ss_pred HHHhC--CCCccEEEeCCCC
Q psy1489 129 VTILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 129 ~~~~~--~~~~D~V~sd~~~ 146 (229)
.+... -+.+|+++.++..
T Consensus 77 ~~~~~~~~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 77 FRKVVDHFGRLDILVNNAGV 96 (267)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 22110 1368999998753
No 456
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=86.36 E-value=5.1 Score=31.70 Aligned_cols=77 Identities=18% Similarity=0.166 Sum_probs=50.7
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCC---cEEEEEeCCCCCC---------CCCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPK---GLVLSVDKLPIYP---------IDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~---~~v~gvD~~~~~~---------~~~~~~~~~~D~~~~~~~~~i 128 (229)
.+.+||-.|+ +|+++..+++.+.. .. .+|+.++.++... -.++.++ .+|+.+.+....+
T Consensus 20 ~~k~vlITGa-sggIG~~la~~L~~-------~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~v~~~ 90 (267)
T 1sny_A 20 HMNSILITGC-NRGLGLGLVKALLN-------LPQPPQHLFTTCRNREQAKELEDLAKNHSNIHIL-EIDLRNFDAYDKL 90 (267)
T ss_dssp CCSEEEESCC-SSHHHHHHHHHHHT-------SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEE-ECCTTCGGGHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHh-------cCCCCcEEEEEecChhhhHHHHHhhccCCceEEE-EecCCChHHHHHH
Confidence 4567887775 57888888887752 12 5899999875210 1257788 8999997654433
Q ss_pred HH----HhCCCCccEEEeCCCC
Q psy1489 129 VT----ILKDDKLDVVLSDMAP 146 (229)
Q Consensus 129 ~~----~~~~~~~D~V~sd~~~ 146 (229)
.+ .+....+|+|+.++..
T Consensus 91 ~~~~~~~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 91 VADIEGVTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHHHHHHHGGGCCSEEEECCCC
T ss_pred HHHHHHhcCCCCccEEEECCCc
Confidence 32 2222269999998754
No 457
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=86.35 E-value=8.1 Score=32.40 Aligned_cols=74 Identities=23% Similarity=0.192 Sum_probs=48.1
Q ss_pred CCeeEeecCCCCchHHHHHHHHh-ccCCCCCCCCcEEEEEeCCCCCC------------------------CCC---CeE
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVN-SHGYDSKQPKGLVLSVDKLPIYP------------------------IDG---AVV 113 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~-~~~~~~~~~~~~v~gvD~~~~~~------------------------~~~---~~~ 113 (229)
+++||-.| |+|.++..+++.+. . ...+|+++|.++-.. ..+ +.+
T Consensus 2 ~m~vlVTG-atG~iG~~l~~~L~~~-------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (397)
T 1gy8_A 2 HMRVLVCG-GAGYIGSHFVRALLRD-------TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAAL 73 (397)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHH-------CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEE
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHh-------CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEE
Confidence 35777776 56888888887653 2 335899998764211 124 788
Q ss_pred EecCCCCChhHHHHHHHHhCCCCccEEEeCCCC
Q psy1489 114 LSKCDFTQPDIQDRLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 114 ~~~~D~~~~~~~~~i~~~~~~~~~D~V~sd~~~ 146 (229)
+ .+|+.+......+...+ +.+|+|+..+..
T Consensus 74 ~-~~Dl~d~~~~~~~~~~~--~~~d~vih~A~~ 103 (397)
T 1gy8_A 74 E-VGDVRNEDFLNGVFTRH--GPIDAVVHMCAF 103 (397)
T ss_dssp E-ESCTTCHHHHHHHHHHS--CCCCEEEECCCC
T ss_pred E-ECCCCCHHHHHHHHHhc--CCCCEEEECCCc
Confidence 8 99999976544333211 349999987754
No 458
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=86.29 E-value=5.8 Score=32.16 Aligned_cols=67 Identities=19% Similarity=0.190 Sum_probs=44.0
Q ss_pred eeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----CCCCCeEEecCCCCChhHHHHHHHHhCCCCccE
Q psy1489 64 KVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----PIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDV 139 (229)
Q Consensus 64 ~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~ 139 (229)
+||-.| |+|.++..+++.+. ..+.+++++...-. ...++.++ .+|+.+ .... ..+. .+|.
T Consensus 3 ~vlVTG-atG~iG~~l~~~L~--------~~g~~v~~~~~~~~~~~~~~~~~~~~-~~Dl~~-~~~~---~~~~--~~d~ 66 (313)
T 3ehe_A 3 LIVVTG-GAGFIGSHVVDKLS--------ESNEIVVIDNLSSGNEEFVNEAARLV-KADLAA-DDIK---DYLK--GAEE 66 (313)
T ss_dssp CEEEET-TTSHHHHHHHHHHT--------TTSCEEEECCCSSCCGGGSCTTEEEE-CCCTTT-SCCH---HHHT--TCSE
T ss_pred EEEEEC-CCchHHHHHHHHHH--------hCCCEEEEEcCCCCChhhcCCCcEEE-ECcCCh-HHHH---HHhc--CCCE
Confidence 566666 67999999998875 44577777654311 12457788 899987 3322 2232 6899
Q ss_pred EEeCCCC
Q psy1489 140 VLSDMAP 146 (229)
Q Consensus 140 V~sd~~~ 146 (229)
|+..+..
T Consensus 67 vih~a~~ 73 (313)
T 3ehe_A 67 VWHIAAN 73 (313)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9976653
No 459
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=86.29 E-value=1.2 Score=39.66 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=46.3
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC---------CCCCCeEEecCCCCChhH--------
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY---------PIDGAVVLSKCDFTQPDI-------- 124 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~---------~~~~~~~~~~~D~~~~~~-------- 124 (229)
..+|+||.||.|+++.-+.+. | --.|.++|+++.. ..++..++ .+|+.+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G---------~~~v~avE~d~~A~~ty~~N~~~~p~~~~~-~~DI~~i~~~~~~~~~~ 156 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-G---------GQCVFTSEWNKHAVRTYKANHYCDPATHHF-NEDIRDITLSHQEGVSD 156 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-T---------EEEEEEECCCHHHHHHHHHHSCCCTTTCEE-ESCTHHHHCTTCTTSCH
T ss_pred cceEEEecCCccHHHHHHHHC-C---------CEEEEEEeCCHHHHHHHHHhcccCCCccee-ccchhhhhhccccccch
Confidence 468999999999999886542 2 1358999998621 12455666 788876431
Q ss_pred ---HHHHHHHhCCCCccEEEeCCCC
Q psy1489 125 ---QDRLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 125 ---~~~i~~~~~~~~~D~V~sd~~~ 146 (229)
...+...+ ..+|+|+...++
T Consensus 157 ~~~~~~i~~~~--~~~Dvl~gGpPC 179 (482)
T 3me5_A 157 EAAAEHIRQHI--PEHDVLLAGFPC 179 (482)
T ss_dssp HHHHHHHHHHS--CCCSEEEEECCC
T ss_pred hhHHhhhhhcC--CCCCEEEecCCC
Confidence 11122222 358999987654
No 460
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=86.26 E-value=14 Score=31.03 Aligned_cols=77 Identities=12% Similarity=0.103 Sum_probs=48.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--CC---------------CCCeEEecCCCCChh
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--PI---------------DGAVVLSKCDFTQPD 123 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--~~---------------~~~~~~~~~D~~~~~ 123 (229)
.|++||-.|++ |+++..+++++.. ...+|+.++.++.. .+ ..+.++ ..|+++.+
T Consensus 44 ~gk~vlVTGas-~GIG~aia~~La~-------~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~-~~Dv~d~~ 114 (346)
T 3kvo_A 44 AGCTVFITGAS-RGIGKAIALKAAK-------DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC-IVDVRDEQ 114 (346)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHT-------TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEE-ECCTTCHH
T ss_pred CCCEEEEeCCC-hHHHHHHHHHHHH-------CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEE-EccCCCHH
Confidence 46788877766 5667777766642 23588888887621 11 135677 89999986
Q ss_pred HHHHHHHHhCC--CCccEEEeCCCC
Q psy1489 124 IQDRLVTILKD--DKLDVVLSDMAP 146 (229)
Q Consensus 124 ~~~~i~~~~~~--~~~D~V~sd~~~ 146 (229)
....+.+.+.+ +..|+++.++..
T Consensus 115 ~v~~~~~~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 115 QISAAVEKAIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 54433322211 379999998764
No 461
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=86.25 E-value=5.7 Score=31.78 Aligned_cols=77 Identities=12% Similarity=0.003 Sum_probs=49.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CC--------CCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YP--------IDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~--------~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+.+||-.|+ +|+++..+++.+.. ...+|+.+|.++- .. -..+.++ .+|+.+.+....+.+
T Consensus 30 ~~k~vlITGa-sggIG~~la~~L~~-------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~v~~~~~ 100 (272)
T 1yb1_A 30 TGEIVLITGA-GHGIGRLTAYEFAK-------LKSKLVLWDINKHGLEETAAKCKGLGAKVHTF-VVDCSNREDIYSSAK 100 (272)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHH-------CCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEE-EeeCCCHHHHHHHHH
Confidence 4678888775 57788887776642 2358999988751 10 1256778 899999764443322
Q ss_pred HhC--CCCccEEEeCCCC
Q psy1489 131 ILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~ 146 (229)
.+. -+.+|+|+.++..
T Consensus 101 ~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 101 KVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHHHTCCCSEEEECCCC
T ss_pred HHHHHCCCCcEEEECCCc
Confidence 111 1469999998764
No 462
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=86.12 E-value=4.6 Score=31.83 Aligned_cols=76 Identities=12% Similarity=0.089 Sum_probs=48.0
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CCCCCCeEEecCCCCChhHHHHHHHHhCC-
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YPIDGAVVLSKCDFTQPDIQDRLVTILKD- 134 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~~~~~~~~~~~D~~~~~~~~~i~~~~~~- 134 (229)
+++||-.|++ |+++..+++.+.. ...+|+.+|.++- ...+++.++ ++|+++.+....+.+.+.+
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 2 NRGVIVTGGG-HGIGKQICLDFLE-------AGDKVCFIDIDEKRSADFAKERPNLFYF-HGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CCEEEEESTT-SHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHTTCTTEEEE-ECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHhcccCCeE-EeeCCCHHHHHHHHHHHHHH
Confidence 3567777754 5677777766542 2358999998751 234566788 9999997654433322111
Q ss_pred -CCccEEEeCCCC
Q psy1489 135 -DKLDVVLSDMAP 146 (229)
Q Consensus 135 -~~~D~V~sd~~~ 146 (229)
+..|+++.++..
T Consensus 73 ~g~id~lv~nAg~ 85 (247)
T 3dii_A 73 LQRIDVLVNNACR 85 (247)
T ss_dssp HSCCCEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 479999998753
No 463
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=86.04 E-value=11 Score=30.32 Aligned_cols=78 Identities=22% Similarity=0.165 Sum_probs=50.6
Q ss_pred CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--------CCCCCCeEEecCCCCChhHHHHHHHH
Q psy1489 61 PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--------YPIDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 61 ~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--------~~~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
.+.+||-.|++. ++++..+++.+.. ...+|+.++.++. .....+.++ .+|+++.+....+.+.
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~-~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHR-------EGAELAFTYVGQFKDRVEKLCAEFNPAAVL-PCDVISDQEIKDLFVE 96 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHH-------TTCEEEEEECTTCHHHHHHHHGGGCCSEEE-ECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-------cCCEEEEeeCchHHHHHHHHHHhcCCceEE-EeecCCHHHHHHHHHH
Confidence 467888888643 5677777766542 2358999988751 122357888 9999997654443322
Q ss_pred hC--CCCccEEEeCCCC
Q psy1489 132 LK--DDKLDVVLSDMAP 146 (229)
Q Consensus 132 ~~--~~~~D~V~sd~~~ 146 (229)
+. -+..|+++.++..
T Consensus 97 ~~~~~g~id~li~nAg~ 113 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAF 113 (280)
T ss_dssp HHHHCSSCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 21 1478999998754
No 464
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.02 E-value=7.9 Score=27.96 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=57.7
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CC--CCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YP--IDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~--~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
..+|+=+|+ |.++..+++.+.. ....|+.+|.++. .. ..++.++ .+|.++++..... .
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~-------~g~~V~vid~~~~~~~~~~~~~~~~~~~~i-~gd~~~~~~l~~a----~ 68 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQ-------RGQNVTVISNLPEDDIKQLEQRLGDNADVI-PGDSNDSSVLKKA----G 68 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHH-------TTCCEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTTSHHHHHHH----T
T ss_pred CCcEEEECC--CHHHHHHHHHHHH-------CCCCEEEEECCChHHHHHHHHhhcCCCeEE-EcCCCCHHHHHHc----C
Confidence 346777765 7777777776631 2247999998741 11 2368888 9999987654321 1
Q ss_pred CCCccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeecC
Q psy1489 134 DDKLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIWD 186 (229)
Q Consensus 134 ~~~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~~ 186 (229)
-..+|+|++.... .... ..+....+.+.|...++.....
T Consensus 69 i~~ad~vi~~~~~---------d~~n-----~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 69 IDRCRAILALSDN---------DADN-----AFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp TTTCSEEEECSSC---------HHHH-----HHHHHHHHHHTSSSCEEEECSS
T ss_pred hhhCCEEEEecCC---------hHHH-----HHHHHHHHHHCCCCEEEEEECC
Confidence 2468999984421 1111 2233445556677777775543
No 465
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=86.02 E-value=0.94 Score=41.95 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=27.4
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhcc-CCCCCCC--CcEEEEEeCCCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSH-GYDSKQP--KGLVLSVDKLPI 105 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~-~~~~~~~--~~~v~gvD~~~~ 105 (229)
+..+|+|+|.|+|.....+.+..... ...|..+ ..+++++|..|+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~ 105 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPL 105 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCC
Confidence 44699999999998777666542100 0001111 247899998663
No 466
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=85.92 E-value=12 Score=30.16 Aligned_cols=69 Identities=19% Similarity=0.153 Sum_probs=45.8
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC-CCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccEEE
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP-IYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVL 141 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~-~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~ 141 (229)
++||-.| |+|.++..+++.+.. ...+|++++.++ ...++++.++ .+|+. .+... +.+. .+|+|+
T Consensus 3 ~~vlVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~~-~~Dl~-~~~~~---~~~~--~~d~Vi 67 (311)
T 3m2p_A 3 LKIAVTG-GTGFLGQYVVESIKN-------DGNTPIILTRSIGNKAINDYEYR-VSDYT-LEDLI---NQLN--DVDAVV 67 (311)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEESCCC-----CCEEE-ECCCC-HHHHH---HHTT--TCSEEE
T ss_pred CEEEEEC-CCcHHHHHHHHHHHh-------CCCEEEEEeCCCCcccCCceEEE-Ecccc-HHHHH---Hhhc--CCCEEE
Confidence 5677766 478888888876642 225899999874 1124478888 99999 65433 3343 799999
Q ss_pred eCCCC
Q psy1489 142 SDMAP 146 (229)
Q Consensus 142 sd~~~ 146 (229)
..+..
T Consensus 68 h~a~~ 72 (311)
T 3m2p_A 68 HLAAT 72 (311)
T ss_dssp ECCCC
T ss_pred Ecccc
Confidence 87654
No 467
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.87 E-value=5 Score=31.01 Aligned_cols=94 Identities=17% Similarity=0.017 Sum_probs=56.3
Q ss_pred eeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--CCC---CCCCeEEecCCCCChhHHHHHHHHhCCCCcc
Q psy1489 64 KVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--IYP---IDGAVVLSKCDFTQPDIQDRLVTILKDDKLD 138 (229)
Q Consensus 64 ~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~~~---~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D 138 (229)
+|+=+|+ |.++..+++.+.. ....|+.+|.++ ... ..+..++ .+|.++...... ..-..+|
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~-------~g~~v~vid~~~~~~~~l~~~~~~~~i-~gd~~~~~~l~~----a~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLS-------RKYGVVIINKDRELCEEFAKKLKATII-HGDGSHKEILRD----AEVSKND 67 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHH-------TTCCEEEEESCHHHHHHHHHHSSSEEE-ESCTTSHHHHHH----HTCCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHh-------CCCeEEEEECCHHHHHHHHHHcCCeEE-EcCCCCHHHHHh----cCcccCC
Confidence 4666665 7788887776642 235799999886 111 2367788 999999765432 2234789
Q ss_pred EEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEeec
Q psy1489 139 VVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIKIW 185 (229)
Q Consensus 139 ~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~~~ 185 (229)
+|++.... .... ..+....+.+.+...++..+.
T Consensus 68 ~vi~~~~~---------d~~n-----~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 68 VVVILTPR---------DEVN-----LFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp EEEECCSC---------HHHH-----HHHHHHHHHTSCCCEEEECCC
T ss_pred EEEEecCC---------cHHH-----HHHHHHHHHHcCCCeEEEEEe
Confidence 99984421 1111 223334455566777776553
No 468
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=85.73 E-value=7.9 Score=31.12 Aligned_cols=113 Identities=16% Similarity=0.042 Sum_probs=62.7
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC---C--------CCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY---P--------IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~---~--------~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.++++|-.|+ +|+++..+++.+.. ...+|+.++.++.. . -..+.++ ..|+.+.+....+.
T Consensus 28 ~~k~vlVTGa-s~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~ 98 (283)
T 1g0o_A 28 EGKVALVTGA-GRGIGREMAMELGR-------RGCKVIVNYANSTESAEEVVAAIKKNGSDAACV-KANVGVVEDIVRMF 98 (283)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHH-------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHH-------CCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEE-EcCCCCHHHHHHHH
Confidence 4677887776 46777777776642 23588888876511 0 1246777 89999976443332
Q ss_pred HHhC--CCCccEEEeCCCCCCCC-CCccc--HHH-HHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 130 TILK--DDKLDVVLSDMAPNATG-MREMD--HDL-ITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 130 ~~~~--~~~~D~V~sd~~~~~~g-~~~~d--~~~-~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
+... -+.+|+++.++.....+ ..+.+ .+. .++ -....++.+...|+.+|++|.
T Consensus 99 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~ 161 (283)
T 1g0o_A 99 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLIL 161 (283)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEE
Confidence 2111 13689999987642211 11111 111 111 111344556666677788875
No 469
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=85.70 E-value=4.4 Score=31.97 Aligned_cols=77 Identities=13% Similarity=0.131 Sum_probs=47.4
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcE-EEEEeCCCCC----------CCCCCeEEecCCCCCh-hHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGL-VLSVDKLPIY----------PIDGAVVLSKCDFTQP-DIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~-v~gvD~~~~~----------~~~~~~~~~~~D~~~~-~~~~~i 128 (229)
.+++||-.|+ +|+++..+++.+.. ...+ |+.++.++-. +-..+.++ .+|+.+. +....+
T Consensus 4 ~~k~vlVtGa-s~gIG~~~a~~l~~-------~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~-~~D~~~~~~~~~~~ 74 (254)
T 1sby_A 4 TNKNVIFVAA-LGGIGLDTSRELVK-------RNLKNFVILDRVENPTALAELKAINPKVNITFH-TYDVTVPVAESKKL 74 (254)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-------TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEE-ECCTTSCHHHHHHH
T ss_pred CCcEEEEECC-CChHHHHHHHHHHH-------CCCcEEEEEecCchHHHHHHHHHhCCCceEEEE-EEecCCChHHHHHH
Confidence 3678888886 58888888877642 1233 8888876510 01246677 8999986 433222
Q ss_pred HHHh-C-CCCccEEEeCCCC
Q psy1489 129 VTIL-K-DDKLDVVLSDMAP 146 (229)
Q Consensus 129 ~~~~-~-~~~~D~V~sd~~~ 146 (229)
.+.+ . -+.+|+++.++..
T Consensus 75 ~~~~~~~~g~id~lv~~Ag~ 94 (254)
T 1sby_A 75 LKKIFDQLKTVDILINGAGI 94 (254)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHhcCCCCEEEECCcc
Confidence 2211 0 1369999998753
No 470
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=85.59 E-value=4.9 Score=32.41 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=49.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+++||-.|++ |+++..+++.+.. ...+|+.+|.++-. .-..+.++ ++|+++.+....+.+
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~v~~~~~ 101 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAE-------AGAQVAVAARHSDALQVVADEIAGVGGKALPI-RCDVTQPDQVRGMLD 101 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-------TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-EcCCCCHHHHHHHHH
Confidence 46788887865 6677777766542 23589999887511 01257788 999999765443332
Q ss_pred HhC--CCCccEEEeCCCC
Q psy1489 131 ILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~ 146 (229)
.+. -+..|+++.++..
T Consensus 102 ~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 102 QMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 211 1369999998764
No 471
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=85.57 E-value=2.8 Score=34.75 Aligned_cols=77 Identities=9% Similarity=0.002 Sum_probs=49.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C----CC------CCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y----PI------DGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~----~~------~~~~~~~~~D~~~~~~~~~i 128 (229)
.+.+||-.|++ |+++..+++.+.. ...+|++++.++- . .+ ..+.++ ..|+++.+....+
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~-------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dl~~~~~v~~~ 77 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLN-------QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV-QLDVASREGFKMA 77 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE-ECCTTCHHHHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHH-------CCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEE-ECCCCCHHHHHHH
Confidence 36788888866 6677777766642 2358999998751 0 00 156778 8999998654433
Q ss_pred HHHhC--CCCccEEEeCCCC
Q psy1489 129 VTILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 129 ~~~~~--~~~~D~V~sd~~~ 146 (229)
.+.+. -+.+|+++.++..
T Consensus 78 ~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 78 ADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHhCCCCCEEEECCCc
Confidence 32221 1468999998864
No 472
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=85.49 E-value=5.6 Score=31.73 Aligned_cols=113 Identities=10% Similarity=0.075 Sum_probs=63.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-------------CCCCCeEEecCCCCChhHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-------------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-------------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.+++||-.|++ |+++..+++.+.. ...+|+.++.+... .-..+.++ ..|+++.+....
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~ 80 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFAL-------ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY-QSDLSNEEEVAK 80 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTT-------SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEE-ECCCCSHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-------CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEE-ECCCCCHHHHHH
Confidence 46788887865 6677888877742 23578887764210 01246677 899999765444
Q ss_pred HHHHhC--CCCccEEEeCCCCCCCC-CCcccH--HH-HHH----HHHHHHHHHHHcccCCCEEEE
Q psy1489 128 LVTILK--DDKLDVVLSDMAPNATG-MREMDH--DL-ITQ----LAIAVIRFAVTYSKPGADCLI 182 (229)
Q Consensus 128 i~~~~~--~~~~D~V~sd~~~~~~g-~~~~d~--~~-~~~----~~~~~l~~~~~~LkpgG~~v~ 182 (229)
+.+.+. -+..|+++.++.....+ ..+.+. +. .++ -....++.+...++++|.++.
T Consensus 81 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~ 145 (262)
T 3ksu_A 81 LFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIIT 145 (262)
T ss_dssp HHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEE
Confidence 332211 14799999987642211 111111 11 111 112345556666777888775
No 473
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=85.41 E-value=3.8 Score=32.51 Aligned_cols=77 Identities=17% Similarity=0.069 Sum_probs=48.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeC-CC--CC--------CCCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDK-LP--IY--------PIDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~-~~--~~--------~~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.+++||-.|+ +|+++..+++.+.. ...+|+.++. ++ .. .-..+.++ .+|+.+.+....+.
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~-------~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~-~~D~~~~~~~~~~~ 90 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGR-------RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI-QADISKPSEVVALF 90 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHH-------TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTTSHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHH-------CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEE-EecCCCHHHHHHHH
Confidence 4678887775 57788888876642 2358888887 32 10 01246677 89999976443332
Q ss_pred HHhC--CCCccEEEeCCCC
Q psy1489 130 TILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 130 ~~~~--~~~~D~V~sd~~~ 146 (229)
+.+. -+.+|+|+.++..
T Consensus 91 ~~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 91 DKAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHHHHSCEEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 2110 1368999987754
No 474
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=85.27 E-value=1.3 Score=35.62 Aligned_cols=70 Identities=19% Similarity=0.199 Sum_probs=49.0
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHhCCCCccEEE
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTILKDDKLDVVL 141 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~V~ 141 (229)
+++||-.| + |.++..+++.+.. ...+|++++.++-...+++.++ .+|+.+.+... ..+ .+.+|+|+
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~-~~Dl~d~~~~~---~~~-~~~~d~vi 68 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTA-------QGHEVTGLRRSAQPMPAGVQTL-IADVTRPDTLA---SIV-HLRPEILV 68 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHH-------TTCCEEEEECTTSCCCTTCCEE-ECCTTCGGGCT---TGG-GGCCSEEE
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHH-------CCCEEEEEeCCccccccCCceE-EccCCChHHHH---Hhh-cCCCCEEE
Confidence 46799899 4 8999998887642 2358999998763333578888 99999875432 223 23599999
Q ss_pred eCCC
Q psy1489 142 SDMA 145 (229)
Q Consensus 142 sd~~ 145 (229)
..++
T Consensus 69 h~a~ 72 (286)
T 3gpi_A 69 YCVA 72 (286)
T ss_dssp ECHH
T ss_pred EeCC
Confidence 8553
No 475
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=85.24 E-value=10 Score=29.30 Aligned_cols=75 Identities=19% Similarity=0.226 Sum_probs=50.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CCCCCCeEEecCCCCChhHHHHHHHHhCC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YPIDGAVVLSKCDFTQPDIQDRLVTILKD 134 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~~~~~~~~~~~D~~~~~~~~~i~~~~~~ 134 (229)
++++||-.|+ +|+++..+++.+.. ...+|+++|.++- ....+++++ .+|+.+.+....+.+ .-
T Consensus 6 ~~~~vlVTGa-sggiG~~~a~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~--~~ 74 (244)
T 1cyd_A 6 SGLRALVTGA-GKGIGRDTVKALHA-------SGAKVVAVTRTNSDLVSLAKECPGIEPV-CVDLGDWDATEKALG--GI 74 (244)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHSTTCEEE-ECCTTCHHHHHHHHT--TC
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHhccCCCcE-EecCCCHHHHHHHHH--Hc
Confidence 4678887775 57788887776642 2358999988741 013467788 899999765444332 12
Q ss_pred CCccEEEeCCCC
Q psy1489 135 DKLDVVLSDMAP 146 (229)
Q Consensus 135 ~~~D~V~sd~~~ 146 (229)
+.+|+|+.++..
T Consensus 75 ~~id~vi~~Ag~ 86 (244)
T 1cyd_A 75 GPVDLLVNNAAL 86 (244)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 468999998753
No 476
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=85.00 E-value=8.2 Score=30.13 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=49.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+.+||-.| |+|+++..+++.+.. ...+|+.+|.++- . .-..+.++ .+|+.+.+....+.+
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~ 80 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFAT-------AGASVVVSDINADAANHVVDEIQQLGGQAFAC-RCDITSEQELSALAD 80 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHT-------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHH-------CCCEEEEEcCCHHHHHHHHHHHHHhCCceEEE-EcCCCCHHHHHHHHH
Confidence 467788777 568888888887642 2358999988741 0 01356777 899999765443322
Q ss_pred HhC--CCCccEEEeCCCC
Q psy1489 131 ILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~ 146 (229)
.+. -+.+|+|+.++..
T Consensus 81 ~~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 81 FAISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHHHSSCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 111 1369999987754
No 477
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=84.97 E-value=6.1 Score=32.98 Aligned_cols=72 Identities=11% Similarity=-0.025 Sum_probs=46.2
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC----------------CCCCCeEEecCCCCChhHHH
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY----------------PIDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~----------------~~~~~~~~~~~D~~~~~~~~ 126 (229)
++||-.| |+|.++..+++.+.. ...+|++++.++.. ...++.++ .+|+.+.+...
T Consensus 25 ~~vlVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~Dl~d~~~~~ 95 (375)
T 1t2a_A 25 NVALITG-ITGQDGSYLAEFLLE-------KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH-YGDLTDSTCLV 95 (375)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEECCCSSCCCTTTGGGC---------CEEEE-ECCTTCHHHHH
T ss_pred cEEEEEC-CCchHHHHHHHHHHH-------CCCEEEEEECCccccchhhHHHHhhhhccccCCCceEE-EccCCCHHHHH
Confidence 4688776 468888888876642 23589999876421 11356788 89999976544
Q ss_pred HHHHHhCCCCccEEEeCCCC
Q psy1489 127 RLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~ 146 (229)
.+.. +..+|+|+..+..
T Consensus 96 ~~~~---~~~~d~vih~A~~ 112 (375)
T 1t2a_A 96 KIIN---EVKPTEIYNLGAQ 112 (375)
T ss_dssp HHHH---HHCCSEEEECCSC
T ss_pred HHHH---hcCCCEEEECCCc
Confidence 3322 2258999987653
No 478
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=84.95 E-value=13 Score=29.60 Aligned_cols=77 Identities=19% Similarity=0.138 Sum_probs=49.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC------C-CCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY------P-IDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~------~-~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.++++|-.|++ |+++..+++.+.. ...+|+.+|.++-. . -..+.++ ..|+++.+....+.+...
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 10 ENKVAIITGAC-GGIGLETSRVLAR-------AGARVVLADLPETDLAGAAASVGRGAVHH-VVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-------TTCEEEEEECTTSCHHHHHHHHCTTCEEE-ECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-------CCCEEEEEcCCHHHHHHHHHHhCCCeEEE-ECCCCCHHHHHHHHHHHH
Confidence 36778877765 5667776766542 23589999987621 0 1356778 899999765443332111
Q ss_pred --CCCccEEEeCCCC
Q psy1489 134 --DDKLDVVLSDMAP 146 (229)
Q Consensus 134 --~~~~D~V~sd~~~ 146 (229)
-+..|+++.++..
T Consensus 81 ~~~g~id~lv~nAg~ 95 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAH 95 (271)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1368999998764
No 479
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=84.92 E-value=13 Score=29.50 Aligned_cols=77 Identities=12% Similarity=-0.008 Sum_probs=49.2
Q ss_pred CCCeeEeecCCCC-chHHHHHHHHhccCCCCCCCCcEEEEEeCCCC---------CC--CCCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGAAPG-SWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI---------YP--IDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGcGpG-~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~---------~~--~~~~~~~~~~D~~~~~~~~~i 128 (229)
+|+.+|--|++.+ ++...+++.+.. ...+|+.+|.++- .. -..+.++ +.|+++.+....+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~-------~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~ 76 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ-------LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY-QIDVQSDEEVING 76 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH-------TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEE-ECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH-------CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEE-EccCCCHHHHHHH
Confidence 4788898897653 666666665542 2358999998751 11 1357788 8999997644333
Q ss_pred HHHhC--CCCccEEEeCCC
Q psy1489 129 VTILK--DDKLDVVLSDMA 145 (229)
Q Consensus 129 ~~~~~--~~~~D~V~sd~~ 145 (229)
.+... -+..|+++.+..
T Consensus 77 ~~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 77 FEQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHhCCCCEEEeccc
Confidence 22111 157999998875
No 480
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.83 E-value=5.3 Score=32.64 Aligned_cols=77 Identities=18% Similarity=0.054 Sum_probs=49.8
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C--------CCCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y--------PIDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~--------~~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.|.+||-.|++ |+++..+++.+.. ...+|+.+|.++- . .-..+.++ ..|+++.+....+.+
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~-------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dv~d~~~v~~~~~ 100 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFAR-------RGARLVLSDVDQPALEQAVNGLRGQGFDAHGV-VCDVRHLDEMVRLAD 100 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEE-EccCCCHHHHHHHHH
Confidence 46788888876 5677777766542 2358999998751 0 11256778 899999765443332
Q ss_pred HhC--CCCccEEEeCCCC
Q psy1489 131 ILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~~--~~~~D~V~sd~~~ 146 (229)
.+. -+.+|+++.++..
T Consensus 101 ~~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 101 EAFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHHSSCSEEEECCCC
T ss_pred HHHHhCCCCCEEEECCCc
Confidence 211 1379999998764
No 481
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=84.78 E-value=8.4 Score=30.30 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=49.6
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC-------CCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP-------IDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~-------~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.+.+||-.|+ +|+++..+++.+.. ...+|+.++.++-.. -..+.++ ..|+.+.+....+.+.+.
T Consensus 11 ~~k~vlVTGa-sggiG~~~a~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 11 KGLVAVITGG-ASGLGLATAERLVG-------QGASAVLLDLPNSGGEAQAKKLGNNCVFA-PADVTSEKDVQTALALAK 81 (265)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-------TTCEEEEEECTTSSHHHHHHHHCTTEEEE-ECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHH-------CCCEEEEEeCCcHhHHHHHHHhCCceEEE-EcCCCCHHHHHHHHHHHH
Confidence 4678888886 47778777776642 235899999875210 1256778 899999764433322111
Q ss_pred --CCCccEEEeCCCC
Q psy1489 134 --DDKLDVVLSDMAP 146 (229)
Q Consensus 134 --~~~~D~V~sd~~~ 146 (229)
-+.+|+|+.++..
T Consensus 82 ~~~g~id~li~~Ag~ 96 (265)
T 2o23_A 82 GKFGRVDVAVNCAGI 96 (265)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHCCCCCEEEECCcc
Confidence 1369999998754
No 482
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=84.71 E-value=0.41 Score=39.75 Aligned_cols=84 Identities=19% Similarity=0.177 Sum_probs=50.7
Q ss_pred eeEeecC-CC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCC-----CCe-EEecCCCCChhHHHHHHHHhCCC
Q psy1489 64 KVLDCGA-AP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPID-----GAV-VLSKCDFTQPDIQDRLVTILKDD 135 (229)
Q Consensus 64 ~VLDlGc-Gp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~-----~~~-~~~~~D~~~~~~~~~i~~~~~~~ 135 (229)
+||-.|+ |+ |..+..+++..| .+|+++|.++- ..+ ++. ++...+... + ..+..+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G----------a~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~------~-~~~~~~ 210 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG----------YQVAAVSGRES-THGYLKSLGANRILSRDEFAE------S-RPLEKQ 210 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT----------CCEEEEESCGG-GHHHHHHHTCSEEEEGGGSSC------C-CSSCCC
T ss_pred eEEEECCCcHHHHHHHHHHHHcC----------CEEEEEeCCHH-HHHHHHhcCCCEEEecCCHHH------H-HhhcCC
Confidence 4999997 55 777777887764 58999998761 110 221 220111111 0 112345
Q ss_pred CccEEEeCCCCCCCCCCcccHHHHHHHHHHHHHHHHHcccCCCEEEEe
Q psy1489 136 KLDVVLSDMAPNATGMREMDHDLITQLAIAVIRFAVTYSKPGADCLIK 183 (229)
Q Consensus 136 ~~D~V~sd~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~~v~~ 183 (229)
.+|+|+-.. | . ..+..+.+.|+++|++++.
T Consensus 211 ~~d~v~d~~-----g-----~--------~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 211 LWAGAIDTV-----G-----D--------KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp CEEEEEESS-----C-----H--------HHHHHHHHTEEEEEEEEEC
T ss_pred CccEEEECC-----C-----c--------HHHHHHHHHHhcCCEEEEE
Confidence 799988632 2 1 2456788999999999874
No 483
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=84.70 E-value=13 Score=29.37 Aligned_cols=75 Identities=15% Similarity=0.233 Sum_probs=49.6
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCCCCCCeEEecCCCCChhHHHHHHHHh--CCCCccE
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYPIDGAVVLSKCDFTQPDIQDRLVTIL--KDDKLDV 139 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~~~~~~~~~~~D~~~~~~~~~i~~~~--~~~~~D~ 139 (229)
+++||-.|+ +|+++..+++.+.. ...+|+.++.++ ...+.+.++ .+|+.+.+....+.+.. .-+.+|+
T Consensus 21 ~k~vlVTGa-s~gIG~aia~~l~~-------~G~~V~~~~r~~-~~~~~~~~~-~~Dl~d~~~v~~~~~~~~~~~g~iD~ 90 (253)
T 2nm0_A 21 SRSVLVTGG-NRGIGLAIARAFAD-------AGDKVAITYRSG-EPPEGFLAV-KCDITDTEQVEQAYKEIEETHGPVEV 90 (253)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHH-------TTCEEEEEESSS-CCCTTSEEE-ECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred CCEEEEeCC-CCHHHHHHHHHHHH-------CCCEEEEEeCCh-HhhccceEE-EecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 577888886 56677777766542 235888888876 344557888 99999976544332211 1246899
Q ss_pred EEeCCCC
Q psy1489 140 VLSDMAP 146 (229)
Q Consensus 140 V~sd~~~ 146 (229)
++.++..
T Consensus 91 lv~nAg~ 97 (253)
T 2nm0_A 91 LIANAGV 97 (253)
T ss_dssp EEEECSC
T ss_pred EEECCCC
Confidence 9987753
No 484
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=84.61 E-value=5.3 Score=34.15 Aligned_cols=75 Identities=19% Similarity=0.091 Sum_probs=51.3
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--C------------CCCCeEEecCCCCChhHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--P------------IDGAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--~------------~~~~~~~~~~D~~~~~~~~ 126 (229)
.+++||-.| |+|.++.++++.+... +..+|+++|.++-. . -.++.++ .+|+++.....
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~------g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~-~~Dl~d~~~~~ 105 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKR------NPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTF-ALDIGSIEYDA 105 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTT------CCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEE-CCCTTSHHHHH
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHC------CCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEE-EEeCCCHHHHH
Confidence 367888887 4588888888877521 11489999987510 0 1467888 99999976544
Q ss_pred HHHHHhCCCCccEEEeCCCC
Q psy1489 127 RLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~ 146 (229)
.+ +....+|+|+..++.
T Consensus 106 ~~---~~~~~~D~Vih~Aa~ 122 (399)
T 3nzo_A 106 FI---KADGQYDYVLNLSAL 122 (399)
T ss_dssp HH---HHCCCCSEEEECCCC
T ss_pred HH---HHhCCCCEEEECCCc
Confidence 33 334579999987654
No 485
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=84.51 E-value=6.2 Score=31.62 Aligned_cols=77 Identities=26% Similarity=0.275 Sum_probs=49.2
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC------CCCCCCeEEecCCCCChhHHHHHHHHhC-
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI------YPIDGAVVLSKCDFTQPDIQDRLVTILK- 133 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~------~~~~~~~~~~~~D~~~~~~~~~i~~~~~- 133 (229)
.++++|-.|++ |+++..+++.+.. ...+|+.+|.++- ..+.++.++ .+|+.+.+....+.+...
T Consensus 8 ~~k~vlVTGas-~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v~~~~~~~~~ 78 (270)
T 1yde_A 8 AGKVVVVTGGG-RGIGAGIVRAFVN-------SGARVVICDKDESGGRALEQELPGAVFI-LCDVTQEDDVKTLVSETIR 78 (270)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHCTTEEEE-ECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHHhcCCeEE-EcCCCCHHHHHHHHHHHHH
Confidence 36778877754 6777777776642 2358999988741 123457788 999999765443322110
Q ss_pred -CCCccEEEeCCCC
Q psy1489 134 -DDKLDVVLSDMAP 146 (229)
Q Consensus 134 -~~~~D~V~sd~~~ 146 (229)
-+.+|+++.++..
T Consensus 79 ~~g~iD~lv~nAg~ 92 (270)
T 1yde_A 79 RFGRLDCVVNNAGH 92 (270)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1368999998754
No 486
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=84.49 E-value=8.7 Score=30.34 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=48.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C-----------CCCCCeEEecCCCCChhHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y-----------PIDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~-----------~~~~~~~~~~~D~~~~~~~~~ 127 (229)
.++++|-.|++ |+++..+++.+.. ...+|+.++.++- . ....+.++ ..|+++.+....
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~ 76 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLAT-------DGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL-PLDITDCTKADT 76 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHH-------HTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEE-ECCTTCHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH-------CCCEEEEEECCHHHHHHHHHHHHHhccccCcceEE-eccCCCHHHHHH
Confidence 46678877866 5566666655531 1258999988741 0 11457788 899999764443
Q ss_pred HHHHhC--CCCccEEEeCCCC
Q psy1489 128 LVTILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 128 i~~~~~--~~~~D~V~sd~~~ 146 (229)
+.+.+. -+..|+++.++..
T Consensus 77 ~~~~~~~~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 77 EIKDIHQKYGAVDILVNAAAM 97 (250)
T ss_dssp HHHHHHHHHCCEEEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCc
Confidence 322111 1479999998864
No 487
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=84.32 E-value=8.4 Score=31.32 Aligned_cols=71 Identities=24% Similarity=0.321 Sum_probs=47.0
Q ss_pred eeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC---CC-CCCeEEecCCCCChhHHHHHHHHhCCCCccE
Q psy1489 64 KVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY---PI-DGAVVLSKCDFTQPDIQDRLVTILKDDKLDV 139 (229)
Q Consensus 64 ~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~---~~-~~~~~~~~~D~~~~~~~~~i~~~~~~~~~D~ 139 (229)
+||-.| |+|.++..+++.+.. ...+|++++.++-. .+ .++.++ .+|+.+.+....+. ....+|+
T Consensus 3 ~ilVtG-atG~iG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~---~~~~~d~ 70 (330)
T 2c20_A 3 SILICG-GAGYIGSHAVKKLVD-------EGLSVVVVDNLQTGHEDAITEGAKFY-NGDLRDKAFLRDVF---TQENIEA 70 (330)
T ss_dssp EEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEECCSSCCGGGSCTTSEEE-ECCTTCHHHHHHHH---HHSCEEE
T ss_pred EEEEEC-CCcHHHHHHHHHHHh-------CCCEEEEEeCCCcCchhhcCCCcEEE-ECCCCCHHHHHHHH---hhcCCCE
Confidence 567666 478888888876642 23589999876411 12 267888 99999976544332 2236999
Q ss_pred EEeCCCC
Q psy1489 140 VLSDMAP 146 (229)
Q Consensus 140 V~sd~~~ 146 (229)
|+..+..
T Consensus 71 vih~a~~ 77 (330)
T 2c20_A 71 VMHFAAD 77 (330)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9987653
No 488
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=84.31 E-value=4.6 Score=32.05 Aligned_cols=77 Identities=17% Similarity=0.112 Sum_probs=49.0
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C----C-CCCCeEEecCCCCChhHHHHHHHHh-
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y----P-IDGAVVLSKCDFTQPDIQDRLVTIL- 132 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~----~-~~~~~~~~~~D~~~~~~~~~i~~~~- 132 (229)
.+++||-.|+ +|+++..+++.+.. ...+|+.+|.++- . . -..+.++ ++|+++.+....+.+..
T Consensus 7 ~~k~vlVTGa-s~gIG~~ia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGS-ARGIGRAFAEAYVR-------EGATVAIADIDIERARQAAAEIGPAAYAV-QMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHHhCCCceEE-EeeCCCHHHHHHHHHHHH
Confidence 4678888885 46777777776642 2358999998741 0 1 1346778 89999976444332211
Q ss_pred -CCCCccEEEeCCCC
Q psy1489 133 -KDDKLDVVLSDMAP 146 (229)
Q Consensus 133 -~~~~~D~V~sd~~~ 146 (229)
.-+.+|+++.++..
T Consensus 78 ~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 78 EHAGGLDILVNNAAL 92 (259)
T ss_dssp HHSSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 12379999998764
No 489
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=84.24 E-value=4.7 Score=33.82 Aligned_cols=72 Identities=17% Similarity=0.007 Sum_probs=47.2
Q ss_pred CeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC-------CC--------C-CCeEEecCCCCChhHHH
Q psy1489 63 LKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY-------PI--------D-GAVVLSKCDFTQPDIQD 126 (229)
Q Consensus 63 ~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~-------~~--------~-~~~~~~~~D~~~~~~~~ 126 (229)
.+||-.| |+|.++..+++.+.. ...+|++++.++-. .+ + ++.++ .+|+.+.....
T Consensus 29 k~vlVtG-atG~IG~~l~~~L~~-------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~ 99 (381)
T 1n7h_A 29 KIALITG-ITGQDGSYLTEFLLG-------KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH-YADLTDASSLR 99 (381)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHH-------TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEE-ECCTTCHHHHH
T ss_pred CeEEEEc-CCchHHHHHHHHHHH-------CCCEEEEEecCCccccchhhhhhhhccccccccceEEE-ECCCCCHHHHH
Confidence 4788887 468888888876642 22589999876421 11 1 67788 89999976544
Q ss_pred HHHHHhCCCCccEEEeCCCC
Q psy1489 127 RLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 127 ~i~~~~~~~~~D~V~sd~~~ 146 (229)
.+.. +..+|+|+..+..
T Consensus 100 ~~~~---~~~~d~Vih~A~~ 116 (381)
T 1n7h_A 100 RWID---VIKPDEVYNLAAQ 116 (381)
T ss_dssp HHHH---HHCCSEEEECCSC
T ss_pred HHHH---hcCCCEEEECCcc
Confidence 3322 2258999987653
No 490
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=84.19 E-value=10 Score=29.81 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=47.9
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CC---------CCCCeEEecCCC--CChhHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YP---------IDGAVVLSKCDF--TQPDIQDR 127 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~---------~~~~~~~~~~D~--~~~~~~~~ 127 (229)
.+++||-.|++ |+++..+++.+.. ...+|+.+|.++- .. -..+.++ ..|+ .+.+....
T Consensus 11 ~~k~vlVTGas-~gIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~ 81 (252)
T 3f1l_A 11 NDRIILVTGAS-DGIGREAAMTYAR-------YGATVILLGRNEEKLRQVASHINEETGRQPQWF-ILDLLTCTSENCQQ 81 (252)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEE-ECCTTTCCHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEE-EEecccCCHHHHHH
Confidence 46788888854 6677777766542 2358999998751 10 1256778 8999 77654433
Q ss_pred HHHHh--CCCCccEEEeCCCC
Q psy1489 128 LVTIL--KDDKLDVVLSDMAP 146 (229)
Q Consensus 128 i~~~~--~~~~~D~V~sd~~~ 146 (229)
+.+.+ .-+..|+++.++..
T Consensus 82 ~~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 82 LAQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHHHHHCSCCSEEEECCCC
T ss_pred HHHHHHHhCCCCCEEEECCcc
Confidence 32221 12479999998764
No 491
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=84.18 E-value=14 Score=29.13 Aligned_cols=77 Identities=12% Similarity=0.115 Sum_probs=47.7
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--CC----C-CCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--YP----I-DGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~~----~-~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.++++|-.|++ |+++..+++.+.. ...+|+.+|.++- .. + ..+.++ ..|+++.+....+.+...
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~ 76 (257)
T 3tpc_A 6 KSRVFIVTGAS-SGLGAAVTRMLAQ-------EGATVLGLDLKPPAGEEPAAELGAAVRFR-NADVTNEADATAALAFAK 76 (257)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH-------TTCEEEEEESSCC------------CEEE-ECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH-------CCCEEEEEeCChHHHHHHHHHhCCceEEE-EccCCCHHHHHHHHHHHH
Confidence 46778887865 5667776766542 2358999988762 11 1 246778 899999765443332211
Q ss_pred --CCCccEEEeCCCC
Q psy1489 134 --DDKLDVVLSDMAP 146 (229)
Q Consensus 134 --~~~~D~V~sd~~~ 146 (229)
-+..|+++.++..
T Consensus 77 ~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 77 QEFGHVHGLVNCAGT 91 (257)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1369999998764
No 492
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=83.80 E-value=5.6 Score=33.37 Aligned_cols=72 Identities=18% Similarity=0.122 Sum_probs=49.1
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCC-cEEEEEeCCCCCC------CCCCeEEecCCCCChhHHHHHHHHhC
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPK-GLVLSVDKLPIYP------IDGAVVLSKCDFTQPDIQDRLVTILK 133 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~-~~v~gvD~~~~~~------~~~~~~~~~~D~~~~~~~~~i~~~~~ 133 (229)
.+++||-.|+ +|.++..+++.+.. .. .+|++++.++... .+++.++ .+|+.+.+. +...+.
T Consensus 31 ~~~~ilVtGa-tG~iG~~l~~~L~~-------~g~~~V~~~~r~~~~~~~~l~~~~~v~~~-~~Dl~d~~~---l~~~~~ 98 (377)
T 2q1s_A 31 ANTNVMVVGG-AGFVGSNLVKRLLE-------LGVNQVHVVDNLLSAEKINVPDHPAVRFS-ETSITDDAL---LASLQD 98 (377)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHH-------TTCSEEEEECCCTTCCGGGSCCCTTEEEE-CSCTTCHHH---HHHCCS
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHH-------cCCceEEEEECCCCCchhhccCCCceEEE-ECCCCCHHH---HHHHhh
Confidence 3578887774 68888888876642 23 5899998875211 2467888 999998653 333333
Q ss_pred CCCccEEEeCCCC
Q psy1489 134 DDKLDVVLSDMAP 146 (229)
Q Consensus 134 ~~~~D~V~sd~~~ 146 (229)
.+|+|+..+..
T Consensus 99 --~~d~Vih~A~~ 109 (377)
T 2q1s_A 99 --EYDYVFHLATY 109 (377)
T ss_dssp --CCSEEEECCCC
T ss_pred --CCCEEEECCCc
Confidence 68999987653
No 493
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=83.62 E-value=8.9 Score=30.33 Aligned_cols=78 Identities=15% Similarity=0.075 Sum_probs=50.7
Q ss_pred CCCeeEeecCCC-CchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC------------CCCCeEEecCCCCChhHHHH
Q psy1489 61 PGLKVLDCGAAP-GSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP------------IDGAVVLSKCDFTQPDIQDR 127 (229)
Q Consensus 61 ~g~~VLDlGcGp-G~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~------------~~~~~~~~~~D~~~~~~~~~ 127 (229)
.+++||-.|++. |+++..+++.+.. ...+|+.++.+.... -..+.++ +.|+.+.+....
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~-------~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~v~~ 90 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAE-------MGAAVAITYASRAQGAEENVKELEKTYGIKAKAY-KCQVDSYESCEK 90 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHH-------TSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECC-BCCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHH-------CCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEE-ecCCCCHHHHHH
Confidence 467888888864 7788887776642 235888888765211 1246677 899999765443
Q ss_pred HHHHhC--CCCccEEEeCCCC
Q psy1489 128 LVTILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 128 i~~~~~--~~~~D~V~sd~~~ 146 (229)
+.+.+. -+..|+++.++..
T Consensus 91 ~~~~~~~~~g~id~li~nAg~ 111 (267)
T 3gdg_A 91 LVKDVVADFGQIDAFIANAGA 111 (267)
T ss_dssp HHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCc
Confidence 332211 1478999998764
No 494
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=83.24 E-value=12 Score=29.37 Aligned_cols=77 Identities=9% Similarity=0.115 Sum_probs=49.4
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC-----------CCCCeEEecCCCCChhHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP-----------IDGAVVLSKCDFTQPDIQDRLV 129 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~-----------~~~~~~~~~~D~~~~~~~~~i~ 129 (229)
.+++||-.|+ +|+++..+++.+.. ...+|+.++.+.-.. -..+.++ .+|+.+.+....+.
T Consensus 13 ~~k~vlITGa-sggiG~~~a~~l~~-------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~~~~~~ 83 (265)
T 1h5q_A 13 VNKTIIVTGG-NRGIGLAFTRAVAA-------AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAY-QCDVSNTDIVTKTI 83 (265)
T ss_dssp TTEEEEEETT-TSHHHHHHHHHHHH-------TTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEE-ECCTTCHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHH-------CCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEE-EeeCCCHHHHHHHH
Confidence 3677888885 57788888776642 235899998754110 1246778 89999976544332
Q ss_pred HHhC--CCCccEEEeCCCC
Q psy1489 130 TILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 130 ~~~~--~~~~D~V~sd~~~ 146 (229)
+.+. -+.+|+|+.++..
T Consensus 84 ~~~~~~~~~id~li~~Ag~ 102 (265)
T 1h5q_A 84 QQIDADLGPISGLIANAGV 102 (265)
T ss_dssp HHHHHHSCSEEEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCc
Confidence 2211 2469999988754
No 495
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=83.20 E-value=10 Score=29.93 Aligned_cols=77 Identities=14% Similarity=0.045 Sum_probs=49.5
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCC--C--------CCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIY--P--------IDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~--~--------~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.+.+||-.|++ |+++..+++.+.. ...+|+.+|.++-. . -..+.++ .+|+++.+....+.+
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~ 76 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAA-------EGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR-SLDARNEDEVTAFLN 76 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHH-------TTCEEEEEESSGGGGHHHHHHHHHTTCEEEEE-ECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH-------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE-ECcCCCHHHHHHHHH
Confidence 46778888866 5567777766542 23589999987511 0 1246778 899999765444332
Q ss_pred Hh-CCCCccEEEeCCCC
Q psy1489 131 IL-KDDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~~-~~~~~D~V~sd~~~ 146 (229)
.+ ..+..|+++.++..
T Consensus 77 ~~~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 77 AADAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHHHSCEEEEEECCCC
T ss_pred HHHhhCCceEEEECCCc
Confidence 21 11579999998764
No 496
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=83.09 E-value=13 Score=29.73 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=49.4
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCCCC----------CCCCeEEecCCCCChhHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPIYP----------IDGAVVLSKCDFTQPDIQDRLVT 130 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~~~----------~~~~~~~~~~D~~~~~~~~~i~~ 130 (229)
.|+++|-.|++ |+++..+++.+.. ...+|+.+|.++-.. -..+.++ .+|+.+......+.+
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~~~~~~~ 102 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAG-------AGAHVILHGVKPGSTAAVQQRIIASGGTAQEL-AGDLSEAGAGTDLIE 102 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHH-------TTCEEEEEESSTTTTHHHHHHHHHTTCCEEEE-ECCTTSTTHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH-------CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEE-EecCCCHHHHHHHHH
Confidence 46788877754 6677777766542 235899999876210 1346778 899998764443332
Q ss_pred H-hCCCCccEEEeCCCC
Q psy1489 131 I-LKDDKLDVVLSDMAP 146 (229)
Q Consensus 131 ~-~~~~~~D~V~sd~~~ 146 (229)
. ...+..|+++.++..
T Consensus 103 ~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 103 RAEAIAPVDILVINASA 119 (275)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 1 112579999998764
No 497
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=82.87 E-value=2.2 Score=33.66 Aligned_cols=75 Identities=21% Similarity=0.257 Sum_probs=45.1
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----CCCCCCeEEecCCCCChhHHHHHHHHhC-CC
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----YPIDGAVVLSKCDFTQPDIQDRLVTILK-DD 135 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----~~~~~~~~~~~~D~~~~~~~~~i~~~~~-~~ 135 (229)
+++||-.|+ +|+++..+++.+. ..+.|+.++.++- ....++.++ ..|+.+......+...+. -+
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~--------~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~ 74 (245)
T 3e9n_A 5 KKIAVVTGA-TGGMGIEIVKDLS--------RDHIVYALGRNPEHLAALAEIEGVEPI-ESDIVKEVLEEGGVDKLKNLD 74 (245)
T ss_dssp -CEEEEEST-TSHHHHHHHHHHT--------TTSEEEEEESCHHHHHHHHTSTTEEEE-ECCHHHHHHTSSSCGGGTTCS
T ss_pred CCEEEEEcC-CCHHHHHHHHHHh--------CCCeEEEEeCCHHHHHHHHhhcCCcce-ecccchHHHHHHHHHHHHhcC
Confidence 567787775 5677888888775 3468999988751 124567777 788766432111111111 14
Q ss_pred CccEEEeCCCC
Q psy1489 136 KLDVVLSDMAP 146 (229)
Q Consensus 136 ~~D~V~sd~~~ 146 (229)
.+|+++.++..
T Consensus 75 ~id~lv~~Ag~ 85 (245)
T 3e9n_A 75 HVDTLVHAAAV 85 (245)
T ss_dssp CCSEEEECC--
T ss_pred CCCEEEECCCc
Confidence 68999998754
No 498
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=82.80 E-value=10 Score=31.43 Aligned_cols=76 Identities=12% Similarity=0.063 Sum_probs=47.2
Q ss_pred CCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCC--CCC--------------CCCCeEEecCCCCChhHH
Q psy1489 62 GLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLP--IYP--------------IDGAVVLSKCDFTQPDIQ 125 (229)
Q Consensus 62 g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~--~~~--------------~~~~~~~~~~D~~~~~~~ 125 (229)
+.+||-.|++ |+++..+++.+.. ...+|+.++.+. ... -..+.++ ..|+++.+..
T Consensus 2 ~k~vlVTGas-~GIG~ala~~L~~-------~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dv~d~~~v 72 (327)
T 1jtv_A 2 RTVVLITGCS-SGIGLHLAVRLAS-------DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL-QLDVRDSKSV 72 (327)
T ss_dssp CEEEEESCCS-SHHHHHHHHHHHT-------CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEE-ECCTTCHHHH
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH-------CCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEE-EecCCCHHHH
Confidence 4567777775 5678888877652 113455554332 110 1346778 8999998765
Q ss_pred HHHHHHhCCCCccEEEeCCCC
Q psy1489 126 DRLVTILKDDKLDVVLSDMAP 146 (229)
Q Consensus 126 ~~i~~~~~~~~~D~V~sd~~~ 146 (229)
..+.+.+..+.+|+++.++..
T Consensus 73 ~~~~~~~~~g~iD~lVnnAG~ 93 (327)
T 1jtv_A 73 AAARERVTEGRVDVLVCNAGL 93 (327)
T ss_dssp HHHHHTCTTSCCSEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCc
Confidence 555444444679999998854
No 499
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.76 E-value=16 Score=28.82 Aligned_cols=77 Identities=21% Similarity=0.228 Sum_probs=47.8
Q ss_pred CCCeeEeecC-CCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC-----------CCCCCCeEEecCCCCChhHHHHH
Q psy1489 61 PGLKVLDCGA-APGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI-----------YPIDGAVVLSKCDFTQPDIQDRL 128 (229)
Q Consensus 61 ~g~~VLDlGc-GpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~-----------~~~~~~~~~~~~D~~~~~~~~~i 128 (229)
.+++||-.|+ |.| ++..+++.+.. ...+|+.+|.++- ..-..+.++ .+|+.+.+....+
T Consensus 21 ~~k~vlITGasg~G-IG~~~a~~l~~-------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~v~~~ 91 (266)
T 3o38_A 21 KGKVVLVTAAAGTG-IGSTTARRALL-------EGADVVISDYHERRLGETRDQLADLGLGRVEAV-VCDVTSTEAVDAL 91 (266)
T ss_dssp TTCEEEESSCSSSS-HHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEE-ECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCc-hHHHHHHHHHH-------CCCEEEEecCCHHHHHHHHHHHHhcCCCceEEE-EeCCCCHHHHHHH
Confidence 4678888887 343 55555555431 2358999988741 011367888 9999997654433
Q ss_pred HHHhC--CCCccEEEeCCCC
Q psy1489 129 VTILK--DDKLDVVLSDMAP 146 (229)
Q Consensus 129 ~~~~~--~~~~D~V~sd~~~ 146 (229)
.+.+. -+.+|+++.++..
T Consensus 92 ~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 92 ITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhCCCcEEEECCCc
Confidence 32211 1368999998764
No 500
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=82.63 E-value=8.7 Score=30.45 Aligned_cols=77 Identities=19% Similarity=0.219 Sum_probs=49.1
Q ss_pred CCCeeEeecCCCCchHHHHHHHHhccCCCCCCCCcEEEEEeCCCC--C-------CCCCCeEEecCCCCChhHHHHHHHH
Q psy1489 61 PGLKVLDCGAAPGSWSQVAVKLVNSHGYDSKQPKGLVLSVDKLPI--Y-------PIDGAVVLSKCDFTQPDIQDRLVTI 131 (229)
Q Consensus 61 ~g~~VLDlGcGpG~~s~~la~~~~~~~~~~~~~~~~v~gvD~~~~--~-------~~~~~~~~~~~D~~~~~~~~~i~~~ 131 (229)
.+.+||-.|+ +|+++..+++.+.. ...+|+.++.++- . ...++.++ .+|+++.+....+.+.
T Consensus 15 ~~k~vlITGa-sggiG~~~a~~l~~-------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~ 85 (278)
T 2bgk_A 15 QDKVAIITGG-AGGIGETTAKLFVR-------YGAKVVIADIADDHGQKVCNNIGSPDVISFV-HCDVTKDEDVRNLVDT 85 (278)
T ss_dssp TTCEEEEEST-TSHHHHHHHHHHHH-------TTCEEEEEESCHHHHHHHHHHHCCTTTEEEE-ECCTTCHHHHHHHHHH
T ss_pred cCCEEEEECC-CCHHHHHHHHHHHH-------CCCEEEEEcCChhHHHHHHHHhCCCCceEEE-ECCCCCHHHHHHHHHH
Confidence 3678888885 57788887776642 2358999887641 0 11257788 9999997654433221
Q ss_pred hC--CCCccEEEeCCCC
Q psy1489 132 LK--DDKLDVVLSDMAP 146 (229)
Q Consensus 132 ~~--~~~~D~V~sd~~~ 146 (229)
+. -+.+|+|+.++..
T Consensus 86 ~~~~~~~id~li~~Ag~ 102 (278)
T 2bgk_A 86 TIAKHGKLDIMFGNVGV 102 (278)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 10 1368999987753
Done!