RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14891
(359 letters)
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 129 bits (325), Expect = 2e-36
Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 26/209 (12%)
Query: 162 MERICDLKYVPNATDVLRARVRTNGIIETNFRLGESIVNMVDVGGQRSQRRKWIYCFDDV 221
++++ L V T+GI ET F++ + +M DVGGQR +RRKWI CF+DV
Sbjct: 23 VKQMRILHVVL-----------TSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDV 71
Query: 222 KAVLYVVALSGYDMTLLEDSSVNRLDESLNLFEQVVNNRYFREASFILFLNKFDLFREKI 281
A+++VVA S Y+M + ED+ NRL E+LNLF+ + NNR+ R S ILFLNK DL EK+
Sbjct: 72 TAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKV 131
Query: 282 LYSGRHLRYYLSDFKGP------------DFDVDSGALFIQHKF---ALRNHNSAKVIYP 326
L + Y +F D V FI+ +F + + + YP
Sbjct: 132 LAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYP 191
Query: 327 HFTTATDTSNVQTVFHAVMDLVIKINLQQ 355
HFT A DT N++ VF+ D++ +++L+Q
Sbjct: 192 HFTCAVDTENIRRVFNDCRDIIQRMHLRQ 220
Score = 36.7 bits (84), Expect = 0.002
Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 16/148 (10%)
Query: 33 KHVIKILLLGAGESGKSTLVKQMKIIHND---GFTREELESFKPTVMDNLLSSMKYVLGG 89
+ ++LLLGAGESGKST+VKQM+I+H G + + +
Sbjct: 4 RATHRLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQ-VDKVNFHMFDVGGQRDERR 62
Query: 90 MGILRINLQSAKNKNYAKTILSTMCCFDEEFQMLPDVSTAMLALWQDRGVRLAVARGYEY 149
I N +A A + + + D + L + ++W +R
Sbjct: 63 KWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNR------------ 110
Query: 150 ELNDSALYLFENMERICDLKYVPNATDV 177
L ++ LF N + + K + + +
Sbjct: 111 WLRTISVILFLNKQDLLAEKVLAGKSKI 138
>d1cipa1 a.66.1.1 (A:61-181) Transducin (alpha subunit), insertion
domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 121
Score = 116 bits (291), Expect = 1e-32
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 63 FTREELESFKPTVMDNLLSSMKYVLGGMGILRINLQSAKNKNYAKTILSTMCCFDEEFQM 122
++ EE + +K V N + S+ ++ MG L+I+ A + A+ + +E F M
Sbjct: 1 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAARADDARQLFVLAGAAEEGF-M 59
Query: 123 LPDVSTAMLALWQDRGVRLAVARGYEYELNDSALYLFENMERICDLKYVPNATDVLRARV 182
+++ + LW+D GV+ R EY+LNDSA Y +++RI Y+P DVLR RV
Sbjct: 60 TAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRV 119
Query: 183 RT 184
+T
Sbjct: 120 KT 121
>d1tada1 a.66.1.1 (A:57-177) Transducin (alpha subunit), insertion
domain {Cow (Bos taurus) [TaxId: 9913]}
Length = 121
Score = 115 bits (288), Expect = 4e-32
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 63 FTREELESFKPTVMDNLLSSMKYVLGGMGILRINLQSAKNKNYAKTILSTMCCFDEEFQM 122
++ EE F + N L S+ ++ M L I + ++ A+ ++ M EE M
Sbjct: 1 YSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMH-MADTIEEGTM 59
Query: 123 LPDVSTAMLALWQDRGVRLAVARGYEYELNDSALYLFENMERICDLKYVPNATDVLRARV 182
++S + LW+D G++ R EY+LNDSA Y ++ER+ YVP DVLR+RV
Sbjct: 60 PKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRV 119
Query: 183 RT 184
+T
Sbjct: 120 KT 121
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 112 bits (280), Expect = 4e-30
Identities = 72/178 (40%), Positives = 103/178 (57%), Gaps = 3/178 (1%)
Query: 178 LRARVRTNGIIETNFRLGESIVNMVDVGGQRSQRRKWIYCFDDVKAVLYVVALSGYDMTL 237
+ + T GI E +F + MVDVGGQRS+R++W CFD V ++L++V+ S +D L
Sbjct: 25 IHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVL 84
Query: 238 LEDSSVNRLDESLNLFEQVVNNRYFREASFILFLNKFDLFREKILYSGRHLRYYLSDFKG 297
+ED NRL ESLN+FE +VNNR F S ILFLNK DL EK+ ++ Y +F+G
Sbjct: 85 MEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVV--SIKDYFLEFEG 142
Query: 298 PDFDVDSGALFIQHKF-ALRNHNSAKVIYPHFTTATDTSNVQTVFHAVMDLVIKINLQ 354
+ F+ F R + +Y HFTTA +T N++ VF V D ++ NL+
Sbjct: 143 DPHCLRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTILHDNLK 200
Score = 38.0 bits (87), Expect = 7e-04
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 35 VIKILLLGAGESGKSTLVKQMKIIHNDGFT 64
++KILLLGAGESGKST +KQM+IIH T
Sbjct: 2 LVKILLLGAGESGKSTFLKQMRIIHGQDPT 31
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 111 bits (278), Expect = 8e-30
Identities = 83/171 (48%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 184 TNGIIETNFRLGESIVNMVDVGGQRSQRRKWIYCFDDVKAVLYVVALSGYDMTLLEDSSV 243
T GIIE F L I MVDVGGQRS+RRKWI+CF++V +++++VALS YD L+E +
Sbjct: 32 TTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNE 91
Query: 244 NRLDESLNLFEQVVNNRYFREASFILFLNKFDLFREKILYSGRHLRYYLSDFKGPDFDVD 303
NR++ES LF ++ +F+ +S ILFLNK DL EKI+YS HL Y ++ GP D
Sbjct: 92 NRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYS--HLVDYFPEYDGPQRDAQ 149
Query: 304 SGALFIQHKFALRNHNSAKVIYPHFTTATDTSNVQTVFHAVMDLVIKINLQ 354
+ FI F N +S K+IY HFT ATDT N++ VF AV D ++++NL+
Sbjct: 150 AAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLK 200
Score = 37.2 bits (85), Expect = 0.001
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFT 64
+K+LLLG GESGKST +KQM+IIH G
Sbjct: 3 LKLLLLGTGESGKSTFIKQMRIIHGSGVP 31
>d1zcba1 a.66.1.1 (A:76-201) Transducin (alpha subunit), insertion
domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 126
Score = 105 bits (264), Expect = 1e-28
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 63 FTREELESFKPTVMDNLLSSMKYVLGGMGILRINLQSAKNKNYAKTILS------TMCCF 116
F + E F+PT+ N++ M+ ++ L I KN+ + +++
Sbjct: 1 FDQRAREEFRPTIYSNVIKGMRVLVDAREKLHIPWGDNKNQLHGDKLMAFDTRAPMAAQG 60
Query: 117 DEEFQMLPDVSTAMLALWQDRGVRLAVARGYEYELNDSALYLFENMERICDLKYVPNATD 176
E ++ A+ ALW+D G++ A R E++L +S Y +N++++ Y+P+ D
Sbjct: 61 MVETRVFLQYLPAIRALWEDSGIQNAYDRRREFQLGESVKYFLDNLDKLGVPDYIPSQQD 120
Query: 177 VLRAR 181
+L AR
Sbjct: 121 ILLAR 125
>d1zcaa1 a.66.1.1 (A:83-204) Transducin (alpha subunit), insertion
domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 104 bits (261), Expect = 3e-28
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 63 FTREELESFKPTVMDNLLSSMKYVLGGMGILRINLQSAKNKNYAKTILS--TMCCFDEEF 120
F ++ L F+ T+ DN+L + ++ L I Q ++N+ + +++ E
Sbjct: 1 FDQKALLEFRDTIFDNILKGSRVLVDARDKLGIPWQHSENEKHGMFLMAFENKAGLPVEP 60
Query: 121 QMLPDVSTAMLALWQDRGVRLAVARGYEYELNDSALYLFENMERICDLKYVPNATDVLRA 180
A+ ALW+D G+R A +R E++L +S Y +N++RI L Y P+ D+L A
Sbjct: 61 ATFQLYVPALSALWRDSGIREAFSRRSEFQLGESVKYFLDNLDRIGQLNYFPSKQDILLA 120
Query: 181 R 181
R
Sbjct: 121 R 121
>d2bcjq1 a.66.1.1 (Q:67-183) Transducin (alpha subunit), insertion
domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 117
Score = 103 bits (258), Expect = 7e-28
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 63 FTREELESFKPTVMDNLLSSMKYVLGGMGILRINLQSAKNKNYAKTILSTMCCFDEEFQM 122
++ E+ F V N+ ++M+ ++ M L+I + NK +A+ + F+
Sbjct: 1 YSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEKVSAFE- 59
Query: 123 LPDVSTAMLALWQDRGVRLAVARGYEYELNDSALYLFENMERICDLKYVPNATDVLRAR 181
A+ +LW D G++ R EY+L+DS Y +++R+ D Y+P DVLR R
Sbjct: 60 -NPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPSYLPTQQDVLRVR 117
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 95.8 bits (237), Expect = 5e-24
Identities = 78/169 (46%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
Query: 184 TNGIIETNFRLGESIVNMVDVGGQRSQRRKWIYCFDDVKAVLYVVALSGYDMTLLEDSSV 243
GI+ET+F + M DVGGQRS+R+KWI+CF+ V A+++ VALS YD+ L ED +
Sbjct: 29 GTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEM 88
Query: 244 NRLDESLNLFEQVVNNRYFREASFILFLNKFDLFREKILYSGRHLRYYLSDFKGPDFDVD 303
NR+ ES+ LF+ + NN++F + S ILFLNK DLF EKI S L ++ G + +
Sbjct: 89 NRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKS--PLTICYPEYAGSNTYEE 146
Query: 304 SGALFIQHKFALRNHNSAKVIYPHFTTATDTSNVQTVFHAVMDLVIKIN 352
+ A L K IY HFT ATDT NVQ VF AV D++IK N
Sbjct: 147 AAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNN 195
Score = 36.5 bits (83), Expect = 0.002
Identities = 32/137 (23%), Positives = 45/137 (32%), Gaps = 11/137 (8%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLGGMGILRI 95
+K+LLLGAGESGKST+VKQMKIIH G T K G
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTG------IVETHFTFKDLHFKMFDVGGQRSER 56
Query: 96 NLQSAKNKNYAKTILSTMCCFDEEFQMLPDVSTAMLALWQDRGVRLAVARGYEYELNDSA 155
+ I + + M + D++
Sbjct: 57 KKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICN-----NKWFTDTS 111
Query: 156 LYLFENMERICDLKYVP 172
+ LF N + + + K
Sbjct: 112 IILFLNKKDLFEEKIKK 128
>d1azta1 a.66.1.1 (A:88-201) Transducin (alpha subunit), insertion
domain {Cow (Bos taurus) [TaxId: 9913]}
Length = 114
Score = 92.2 bits (229), Expect = 1e-23
Identities = 30/112 (26%), Positives = 51/112 (45%)
Query: 70 SFKPTVMDNLLSSMKYVLGGMGILRINLQSAKNKNYAKTILSTMCCFDEEFQMLPDVSTA 129
+ + +NL +++ ++ M L ++ A +N + +F P+
Sbjct: 3 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEH 62
Query: 130 MLALWQDRGVRLAVARGYEYELNDSALYLFENMERICDLKYVPNATDVLRAR 181
ALW+D GVR R EY+L D A Y + ++ I YVP+ D+LR R
Sbjct: 63 AKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQDDYVPSDQDLLRCR 114
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 33.5 bits (75), Expect = 0.019
Identities = 18/168 (10%), Positives = 55/168 (32%), Gaps = 9/168 (5%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLGGMGILRI 95
+K+++LG GK++L+ Q ++ +K T+ + L+ V + ++I
Sbjct: 3 LKVIILGDSGVGKTSLMNQYV-------NKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 55
Query: 96 NLQSAKNKNYAKTILSTMCCFDEEFQMLPDVSTAMLALWQDRGVRLAVARGYEYELNDSA 155
+ + + + + + ++ DV+ D + + + +
Sbjct: 56 WDTAGQERFQSLGV--AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 113
Query: 156 LYLFENMERICDLKYVPNATDVLRARVRTNGIIETNFRLGESIVNMVD 203
+ N + + + ET+ + ++
Sbjct: 114 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQ 161
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 33.1 bits (74), Expect = 0.023
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 8/43 (18%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
+++L+LG +GK+T++K+ F E++++ PT+ N
Sbjct: 3 LRLLMLGLDNAGKTTILKK--------FNGEDVDTISPTLGFN 37
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 33.4 bits (75), Expect = 0.024
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 25 LTQLSLQEKHVIKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
L +L ++ILLLG +GK+TL+KQ+ T + + K
Sbjct: 6 LRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQG 59
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 32.3 bits (72), Expect = 0.058
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 9/44 (20%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREE-LESFKPTVMDN 78
IK +++G G GK+ L+ +T + + PTV DN
Sbjct: 4 IKCVVVGDGAVGKTCLLIS--------YTTNKFPSEYVPTVFDN 39
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 32.1 bits (72), Expect = 0.061
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 35 VIKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLGGMGILR 94
++KILL+G GKS L+ + + SF T+ + + G L+
Sbjct: 2 IMKILLIGDSGVGKSCLLVRFV-------EDKFNPSFITTIGIDFKIKTVDINGKKVKLQ 54
Query: 95 I 95
I
Sbjct: 55 I 55
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 31.5 bits (70), Expect = 0.078
Identities = 7/21 (33%), Positives = 17/21 (80%)
Query: 36 IKILLLGAGESGKSTLVKQMK 56
++IL++G +GK+T++ ++K
Sbjct: 1 MRILMVGLDAAGKTTILYKLK 21
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 31.5 bits (70), Expect = 0.081
Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 29 SLQEKHVIKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLG 88
+ ++IL+LG +GK+T++ ++K+ + + + N+ ++ V G
Sbjct: 6 KIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGG 65
Query: 89 GMGILRINLQSAKNKNYAKTILSTMCCFD 117
I + ++Y + D
Sbjct: 66 QDKIRPL------WRHYYTGTQGLIFVVD 88
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 31.5 bits (70), Expect = 0.089
Identities = 18/170 (10%), Positives = 46/170 (27%), Gaps = 11/170 (6%)
Query: 35 VIKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLGGMGILR 94
+ KI+++G GK+ L + + + T+ + + G ++
Sbjct: 2 IFKIIVIGDSNVGKTCLTYRFC-------AGRFPDRTEATIGVDFRERAVDIDGERIKIQ 54
Query: 95 INLQSAKNKNYAKTILSTMCCFDEEFQMLPDVSTAMLALWQDRGVRLAVARGYEYELNDS 154
+ + + + + + + A ND
Sbjct: 55 LWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEE----CKQHLLANDI 110
Query: 155 ALYLFENMERICDLKYVPNATDVLRARVRTNGIIETNFRLGESIVNMVDV 204
L N + VP A + + ET+ + ++ +
Sbjct: 111 PRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAI 160
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 31.2 bits (69), Expect = 0.10
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
KI+++G + GK+ L+ D F E++ PTV +N
Sbjct: 3 CKIVVVGDSQCGKTALLHVFA---KDCFP----ENYVPTVFEN 38
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 31.2 bits (69), Expect = 0.12
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 8/42 (19%)
Query: 37 KILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
K+L LG +GK+TL+ + L + +PT
Sbjct: 2 KLLFLGLDNAGKTTLLHM--------LKNDRLATLQPTWHPT 35
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 31.2 bits (69), Expect = 0.13
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 25 LTQLSLQEKHVIKILLLGAGESGKSTLVKQMK 56
L L L +K K++ LG +GK+TL+ +K
Sbjct: 4 LQFLGLYKKT-GKLVFLGLDNAGKTTLLHMLK 34
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 31.1 bits (69), Expect = 0.14
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
+K +++G G GK+ L+ ND F E + PTV D+
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYA---NDAFP----EEYVPTVFDH 45
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 30.8 bits (68), Expect = 0.15
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 33 KHVIKILLLGAGESGKSTLVKQ 54
K++++G G GKS L Q
Sbjct: 4 SETHKLVVVGGGGVGKSALTIQ 25
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 30.6 bits (68), Expect = 0.17
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 34 HVIKILLLGAGESGKSTLVKQ 54
++IK+L LG GK+T + +
Sbjct: 4 YLIKLLALGDSGVGKTTFLYR 24
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 30.4 bits (67), Expect = 0.18
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 36 IKILLLGAGESGKSTLVKQMK 56
+++ L+G SGK+T V +
Sbjct: 3 MELTLVGLQYSGKTTFVNVIA 23
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 30.4 bits (67), Expect = 0.19
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 35 VIKILLLGAGESGKSTLVKQ 54
++K+++LG GK++L+ +
Sbjct: 2 ILKVIILGDSGVGKTSLMHR 21
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 30.4 bits (67), Expect = 0.22
Identities = 7/21 (33%), Positives = 17/21 (80%)
Query: 36 IKILLLGAGESGKSTLVKQMK 56
++IL+LG +GK+T++ +++
Sbjct: 6 MRILILGLDGAGKTTILYRLQ 26
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 30.4 bits (67), Expect = 0.22
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 29 SLQEKHVIKILLLGAGESGKSTLVKQ 54
S+QEK +++++G G GKS L Q
Sbjct: 1 SMQEK--YRLVVVGGGGVGKSALTIQ 24
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 30.1 bits (66), Expect = 0.23
Identities = 13/44 (29%), Positives = 15/44 (34%), Gaps = 8/44 (18%)
Query: 35 VIKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
V K+LLLGA GKS L + F E
Sbjct: 1 VYKVLLLGAPGVGKSALARI--------FGGVEDGPEAEAAGHT 36
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 30.1 bits (66), Expect = 0.23
Identities = 7/19 (36%), Positives = 16/19 (84%)
Query: 36 IKILLLGAGESGKSTLVKQ 54
IK++++G G GKS+++++
Sbjct: 3 IKMVVVGNGAVGKSSMIQR 21
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 30.4 bits (67), Expect = 0.23
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
K++++G G GK+ L+ + E + PTV +N
Sbjct: 3 KKLVIVGDGACGKTCLLIVNS-------KDQFPEVYVPTVFEN 38
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 30.2 bits (67), Expect = 0.26
Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 34 HVIKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
++ K+LL+G GKS L+ + + T+ +
Sbjct: 5 YLFKLLLIGNSGVGKSCLLLRFS-------DDTYTNDYISTIGVD 42
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 30.0 bits (66), Expect = 0.28
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 36 IKILLLGAGESGKSTLVKQ 54
IK++LLG GKS++V +
Sbjct: 4 IKLVLLGEAAVGKSSIVLR 22
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 30.0 bits (66), Expect = 0.28
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 8/80 (10%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLGGMGILRI 95
IK +++G G GK+ L+ +T + + S+ V G L +
Sbjct: 6 IKCVVVGDGAVGKTCLLIS--------YTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGL 57
Query: 96 NLQSAKNKNYAKTILSTMCC 115
+ + LS
Sbjct: 58 WDTAGQEDYDRLRPLSYPQT 77
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 29.8 bits (66), Expect = 0.29
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 34 HVIKILLLGAGESGKSTLVKQM 55
++ K +++G GKS L+ Q
Sbjct: 3 YIFKYIIIGDMGVGKSCLLHQF 24
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 30.0 bits (66), Expect = 0.29
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 7/43 (16%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
+K+ + G GKS LV + T+ + + PT+
Sbjct: 3 VKLAIFGRAGVGKSALVVRFL-------TKRFIWEYDPTLEST 38
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 29.7 bits (66), Expect = 0.30
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 34 HVIKILLLGAGESGKSTLVKQMK 56
++ K+LL+G GK+ ++ +
Sbjct: 5 YLFKLLLIGDSGVGKTCVLFRFS 27
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 29.9 bits (66), Expect = 0.31
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 34 HVIKILLLGAGESGKSTLVKQ 54
+ K L++G +GKS L+ Q
Sbjct: 4 FLFKFLVIGNAGTGKSCLLHQ 24
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 29.6 bits (65), Expect = 0.37
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 29 SLQEKHVIKILLLGAGESGKSTLVKQMK 56
L K++++G +GK+T++ Q
Sbjct: 9 RLFNHQEHKVIIVGLDNAGKTTILYQFS 36
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 29.8 bits (66), Expect = 0.38
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 19 DEIDKQLTQLSLQEKHVIKILLLGAGESGKSTLVKQM 55
++ + L L ++ + + IL++G G GKS+ V +
Sbjct: 16 TKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSI 52
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 29.6 bits (65), Expect = 0.40
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
++IL+LG +GK+T++ +++I + + N
Sbjct: 18 LRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKN 60
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.4 bits (65), Expect = 0.48
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 34 HVIKILLLGAGESGKSTLVKQ 54
+ KI+L+G GK+ LV++
Sbjct: 4 FLFKIVLIGNAGVGKTCLVRR 24
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 29.4 bits (65), Expect = 0.48
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 36 IKILLLGAGESGKSTLVKQ 54
+KIL++G GKS+L+ +
Sbjct: 8 LKILIIGESGVGKSSLLLR 26
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 29.1 bits (64), Expect = 0.49
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 34 HVIKILLLGAGESGKSTLVKQ 54
++ KIL++G GK++ + +
Sbjct: 4 YMFKILIIGNSSVGKTSFLFR 24
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 29.1 bits (64), Expect = 0.50
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 34 HVIKILLLGAGESGKSTLVKQM 55
++ K++L+G GKS L+ +
Sbjct: 3 YLFKVVLIGDSGVGKSNLLSRF 24
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 29.2 bits (64), Expect = 0.56
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 36 IKILLLGAGESGKSTLVKQ 54
+K+ LLG GKS+++ +
Sbjct: 5 LKVCLLGDTGVGKSSIMWR 23
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 29.2 bits (64), Expect = 0.60
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 32 EKHVIKILLLGAGESGKSTLVKQ 54
+ + K++LLG G GKS+L+ +
Sbjct: 3 KSSLFKVILLGDGGVGKSSLMNR 25
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 29.1 bits (64), Expect = 0.60
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 34 HVIKILLLGAGESGKSTLVKQMK 56
K++L+G GK+ L+ + K
Sbjct: 5 VAFKVMLVGDSGVGKTCLLVRFK 27
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 29.0 bits (63), Expect = 0.63
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 12 IKAQRRSDEIDKQLTQLSLQEKHVIKILLLGAGESGKSTLVKQMKIIHND 61
++ + R D + K + L+++ + + + G SGK+TL Q+ +
Sbjct: 1 MELRDRIDFLCKTI--LAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLRE 48
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 28.8 bits (63), Expect = 0.72
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 36 IKILLLGAGESGKSTLVKQ 54
+++ +LG SGKS+L+ +
Sbjct: 6 LRLGVLGDARSGKSSLIHR 24
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 28.5 bits (62), Expect = 0.76
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 32 EKHVIKILLLGAGESGKSTLVKQ 54
+ KI +LG GKS+L Q
Sbjct: 1 QSKSRKIAILGYRSVGKSSLTIQ 23
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 28.8 bits (63), Expect = 0.76
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 36 IKILLLGAGESGKSTLVKQM 55
+KI++ G GK+TLVK++
Sbjct: 1 MKIIITGEPGVGKTTLVKKI 20
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 28.4 bits (62), Expect = 0.81
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 36 IKILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
++ + GAG GKS+LV + ES+ PTV D
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFV-------KGTFRESYIPTVEDT 38
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 28.4 bits (62), Expect = 0.91
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 37 KILLLGAGESGKSTLVKQ 54
K++++G+G GKS L Q
Sbjct: 6 KVIMVGSGGVGKSALTLQ 23
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 28.4 bits (62), Expect = 0.94
Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 8/43 (18%)
Query: 37 KILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDNL 79
+L +G +SGK+ L + + + ++ D+
Sbjct: 2 AVLFVGLCDSGKTLLFVR--------LLTGQYRDTQTSITDSS 36
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 28.5 bits (62), Expect = 0.99
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 37 KILLLGAGESGKSTLVKQ 54
K++++G G GKS L Q
Sbjct: 6 KLVVVGDGGVGKSALTIQ 23
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 28.0 bits (61), Expect = 1.1
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 37 KILLLGAGESGKSTLVKQ 54
K++ LG GK++L+ +
Sbjct: 2 KLVFLGEQSVGKTSLITR 19
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 28.1 bits (61), Expect = 1.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 37 KILLLGAGESGKSTLVKQ 54
K++L+G G +GK+T VK+
Sbjct: 5 KLVLVGDGGTGKTTFVKR 22
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 28.1 bits (61), Expect = 1.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 37 KILLLGAGESGKSTLVKQ 54
K++LLG GKS+LV +
Sbjct: 8 KLVLLGESAVGKSSLVLR 25
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 27.8 bits (60), Expect = 1.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 37 KILLLGAGESGKSTLVKQMKIIHN 60
+++L+G GKSTL +H+
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHD 28
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 28.0 bits (61), Expect = 1.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 36 IKILLLGAGESGKSTLVKQ 54
K+++LG+G GKS L Q
Sbjct: 4 YKVVVLGSGGVGKSALTVQ 22
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 27.6 bits (60), Expect = 1.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 37 KILLLGAGESGKSTLVKQM 55
K++++GAG GKS L Q+
Sbjct: 5 KLVVVGAGGVGKSALTIQL 23
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 27.6 bits (60), Expect = 1.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 36 IKILLLGAGESGKSTLVKQ 54
K+++LG+G GKS L Q
Sbjct: 4 YKLVVLGSGGVGKSALTVQ 22
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 27.6 bits (60), Expect = 1.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 37 KILLLGAGESGKSTLVKQ 54
K++LLG G GK++LV +
Sbjct: 5 KVVLLGEGCVGKTSLVLR 22
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 28.2 bits (62), Expect = 1.6
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 19 DEIDKQLTQLSLQEKHVIKILLLGAGESGKSTLVKQM 55
D + K+L ++ + + L G SGKS + Q
Sbjct: 30 DRVIKKLDEMCDLDSFFL--FLHGRAGSGKSVIASQA 64
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 27.5 bits (60), Expect = 1.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 35 VIKILLLGAGESGKSTLVKQ 54
+ K +++G GKS L+ Q
Sbjct: 3 LFKYIIIGDTGVGKSCLLLQ 22
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 27.6 bits (60), Expect = 1.7
Identities = 23/136 (16%), Positives = 35/136 (25%), Gaps = 22/136 (16%)
Query: 36 IKILLLGAGESGKST----LVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLGGMG 91
++ +LLG +GK T L K + H ++L +M +G
Sbjct: 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLA--------------TGDMLRAMVASGSELG 49
Query: 92 ILRINLQSAKNKNYAKTILSTMCCFDEEFQMLPDVSTAMLALWQDRGVRLAVARGYEYEL 151
A + +L + E P L R VR A E
Sbjct: 50 KKLKATMDAGKLVSDEMVLELIEKNLET----PPCKNGFLLDGFPRTVRQAEMLDDLMEK 105
Query: 152 NDSALYLFENMERICD 167
L
Sbjct: 106 RKEKLDSVIEFSIPDS 121
>d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate
uridylyltransferase {Thale cress (Arabidopsis thaliana)
[TaxId: 3702]}
Length = 173
Score = 27.4 bits (60), Expect = 1.8
Identities = 13/103 (12%), Positives = 35/103 (33%), Gaps = 12/103 (11%)
Query: 59 HNDGFTREELESFKPTVMDNLLSSMKYVLGGMGILRINLQSAKNKNYAKTILSTMCCFDE 118
H+ + +E+ P + NL + G ++ + ++ + +
Sbjct: 61 HDPNWKLRVIENLYPALSRNLETQSTQPETGT------SRTIVGFGFHDVVIESPVHSIQ 114
Query: 119 EFQMLPDVSTAMLALWQDRGVRLAVARGYEYELNDSALYLFEN 161
+ P +L ++ R ++A Y + +F+N
Sbjct: 115 LSDIDPVGIGDILIAYKKRINQIAQHDSINY------IQVFKN 151
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 27.5 bits (60), Expect = 1.9
Identities = 11/59 (18%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 36 IKILLLGAGESGKST----LVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLGGM 90
+K+++ GA SGK T + + ++ H + L + +N + +++ G
Sbjct: 4 LKVMISGAPASGKGTQCELIKTKYQLAHIS--AGDLLRAEIAAGSENGKRAKEFMEKGQ 60
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 27.6 bits (60), Expect = 1.9
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Query: 36 IKILLLGAGESGKST----LVKQMKIIH 59
I+++L+G +GK T L ++ H
Sbjct: 3 IRMVLIGPPGAGKGTQAPNLQERFHAAH 30
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 27.2 bits (59), Expect = 2.4
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Query: 36 IKILLLGAGESGKST----LVKQMKIIH 59
+ ++L+G +GK T +V I H
Sbjct: 1 MNLVLMGLPGAGKGTQAEKIVAAYGIPH 28
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein
HI0607 {Haemophilus influenzae [TaxId: 727]}
Length = 167
Score = 27.2 bits (59), Expect = 2.6
Identities = 13/124 (10%), Positives = 36/124 (29%), Gaps = 14/124 (11%)
Query: 29 SLQEKHVIK---ILLLGAGESGKSTLVKQMK------IIHNDGFTREEL---ESFKPTVM 76
+++ H+ K +++ G+G K+ + I+ + +
Sbjct: 8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN 67
Query: 77 DNLLSSMKYVLGGMGILRINLQSAKNKNYAKTILSTMCCFDEEFQMLPDVSTAMLALWQD 136
++ I + + + K + + M + T + Q
Sbjct: 68 SLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVE--TPFIRYAQA 125
Query: 137 RGVR 140
RG +
Sbjct: 126 RGKQ 129
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 27.0 bits (58), Expect = 2.6
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 36 IKILLLGAGESGKSTLVKQM 55
+K+++ G +GKS+L+ +
Sbjct: 2 MKVVIAGRPNAGKSSLLNAL 21
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 26.8 bits (58), Expect = 2.8
Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Query: 36 IKILLLGAGESGKST----LVKQMKIIH 59
++I+LLGA +GK T ++++ I
Sbjct: 1 MRIILLGAPVAGKGTQAQFIMEKYGIPQ 28
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis
[TaxId: 1423]}
Length = 223
Score = 27.0 bits (59), Expect = 3.2
Identities = 8/52 (15%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 277 FREKILYSGRHLRYYLSD---FKGPDFDVDSGALFIQHKFALRNHNSAKVIY 325
+R K++ ++ + ++ + D G + + K R K +Y
Sbjct: 161 YRMKLIKDKGYVHFSINGLPILEWMDDGSTYGPVLTKGKIGFRQMAPMKAVY 212
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 26.7 bits (58), Expect = 3.5
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Query: 36 IKILLLGAGESGKST----LVKQMKIIH 59
++ ++GA SGK T + K ++ H
Sbjct: 7 LRAAIMGAPGSGKGTVSSRITKHFELKH 34
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas
syringae pv. tomato [TaxId: 323]}
Length = 222
Score = 26.7 bits (58), Expect = 3.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 31 QEKHVIKILLLGAGESGKSTLVKQM 55
+ K +++ L G + GKSTL+ ++
Sbjct: 5 ERKEMLRFLTCGNVDDGKSTLIGRL 29
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 26.5 bits (57), Expect = 4.3
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 36 IKILLLGAGESGKSTLVKQM 55
++++++G GKSTL+ ++
Sbjct: 1 LRMVIVGKPNVGKSTLLNRL 20
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 26.2 bits (56), Expect = 4.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 33 KHVIKILLLGAGESGKSTLVKQM 55
IK+ ++G GKSTL +
Sbjct: 6 TDAIKVAIVGRPNVGKSTLFNAI 28
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 26.4 bits (57), Expect = 5.1
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Query: 36 IKILLLGAGESGKST----LVKQMKIIH 59
+ I+L+G +GK T +V++ H
Sbjct: 1 MNIVLMGLPGAGKGTQADRIVEKYGTPH 28
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 26.7 bits (58), Expect = 5.1
Identities = 9/48 (18%), Positives = 19/48 (39%)
Query: 5 ISLDSEEIKAQRRSDEIDKQLTQLSLQEKHVIKILLLGAGESGKSTLV 52
++L ++A L + V+ + + G SGKS+ +
Sbjct: 26 LNLIELRMRAGNIQLTNSAISDALKEIDSSVLNVAVTGETGSGKSSFI 73
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 26.1 bits (56), Expect = 5.1
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 30 LQEKHVIKILLLGAGESGKST----LVKQMKIIH 59
+++ + +LG SGK T +V+ +H
Sbjct: 1 MEKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVH 34
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 26.1 bits (56), Expect = 5.7
Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 37 KILLLGAGESGKST----LVKQMKIIH---NDGFTREELESFKPTVMDNLLSSMK 84
+ +LG +GK T +V++ H + R+E ++ + + +K
Sbjct: 3 VVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELL-RDERKNPDSQYGELIEKYIK 56
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 37 KILLLGAGESGKSTLVKQMKIIHNDGFTREELESFKPTVMDN 78
+ +LG SGKS LV ++ + N E F +
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGG 50
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 26.1 bits (56), Expect = 6.6
Identities = 10/59 (16%), Positives = 23/59 (38%)
Query: 7 LDSEEIKAQRRSDEIDKQLTQLSLQEKHVIKILLLGAGESGKSTLVKQMKIIHNDGFTR 65
++ + + + R ++ ++L Q + LL G SGK++L +
Sbjct: 4 VNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIV 62
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 25.6 bits (55), Expect = 6.8
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
Query: 36 IKILLLGAGESGKST----LVKQMKIIH 59
+++LLLG +GK T L +++ I
Sbjct: 1 MRVLLLGPPGAGKGTQAVKLAEKLGIPQ 28
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 25.9 bits (55), Expect = 7.2
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 30 LQEKHVIKILLLGAGESGKSTLVKQM 55
L I++ G +GKS+ + +
Sbjct: 11 LPSDTGIEVAFAGRSNAGKSSALNTL 36
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 25.8 bits (55), Expect = 7.7
Identities = 20/148 (13%), Positives = 43/148 (29%), Gaps = 5/148 (3%)
Query: 46 SGKSTLVKQMKIIHNDGFTREELESFKPTVMDNLLSSMKYVLGGMGILRINLQSAKNKNY 105
SGK+T + + ND E V L + Y +
Sbjct: 20 SGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQ 79
Query: 106 AKTILSTMCCFDEEFQMLPDVSTAMLALWQDRGVRLAVARGYEYELNDSALYLFENMERI 165
+ T + E + + + ++ + + E + ++ E++
Sbjct: 80 SHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLE----EWYKFIEESIHVQ 135
Query: 166 CDLKYVPNAT-DVLRARVRTNGIIETNF 192
DL + +V R+R E +
Sbjct: 136 ADLIIYLRTSPEVAYERIRQRARSEESC 163
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 25.5 bits (54), Expect = 7.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 38 ILLLGAGESGKSTLVKQM 55
IL +G SGKST ++
Sbjct: 5 ILTIGCPGSGKSTWAREF 22
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of
N-ethylmalemide-sensitive fusion (NSF) protein {Chinese
hamster (Cricetulus griseus) [TaxId: 10029]}
Length = 246
Score = 25.7 bits (55), Expect = 9.0
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Query: 18 SDEIDKQLTQLSL--------QEKHVIKILLLGAGESGKSTLVKQMKIIHN 60
D + + L L ++ +LL G SGK+ L ++ N
Sbjct: 15 GDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESN 65
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 25.3 bits (54), Expect = 9.9
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
Query: 38 ILLLGAGESGKST----LVKQMKIIH 59
I +LG +GK T LVK +H
Sbjct: 11 IFVLGGPGAGKGTQCEKLVKDYSFVH 36
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.137 0.391
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,281,095
Number of extensions: 58063
Number of successful extensions: 353
Number of sequences better than 10.0: 1
Number of HSP's gapped: 343
Number of HSP's successfully gapped: 112
Length of query: 359
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 273
Effective length of database: 1,226,816
Effective search space: 334920768
Effective search space used: 334920768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (24.8 bits)