RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy14892
         (135 letters)



>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A
           {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
          Length = 484

 Score = 26.1 bits (56), Expect = 4.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 4   VKAGPELSNKLSHLIQLHYDLASTTVTGIPM 34
           V + PE + K++HLI L          GIP 
Sbjct: 146 VNSSPERAAKVAHLILLDGVWGVDAPEGIPT 176


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.313    0.127    0.362 

Gapped
Lambda     K      H
   0.267   0.0775    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,936,561
Number of extensions: 100355
Number of successful extensions: 72
Number of sequences better than 10.0: 1
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 3
Length of query: 135
Length of database: 6,701,793
Length adjustment: 84
Effective length of query: 51
Effective length of database: 4,356,429
Effective search space: 222177879
Effective search space used: 222177879
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (23.7 bits)