BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14894
(115 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 220 bits (561), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/113 (92%), Positives = 107/113 (94%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDD 60
MGLGK+GNLVYIIDFGLAKKYR+ RTHQHI YRENKNLTGTARYASINTHLGIEQSRRDD
Sbjct: 138 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD 197
Query: 61 LESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
LESLGYVLMYFN GSLPWQGLKAATKRQKYERISEKKMSTPIE LCKGYP E
Sbjct: 198 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEF 250
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 220 bits (560), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/113 (92%), Positives = 107/113 (94%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDD 60
MGLGK+GNLVYIIDFGLAKKYR+ RTHQHI YRENKNLTGTARYASINTHLGIEQSRRDD
Sbjct: 138 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD 197
Query: 61 LESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
LESLGYVLMYFN GSLPWQGLKAATKRQKYERISEKKMSTPIE LCKGYP E
Sbjct: 198 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEF 250
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 220 bits (560), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/113 (92%), Positives = 107/113 (94%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDD 60
MGLGK+GNLVYIIDFGLAKKYR+ RTHQHI YRENKNLTGTARYASINTHLGIEQSRRDD
Sbjct: 136 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD 195
Query: 61 LESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
LESLGYVLMYFN GSLPWQGLKAATKRQKYERISEKKMSTPIE LCKGYP E
Sbjct: 196 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEF 248
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 202 bits (513), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 94/113 (83%), Positives = 102/113 (90%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDD 60
MGLG+R N VYIIDFGLAKKYR+ THQHI YRENKNLTGTARYAS+NTHLGIEQSRRDD
Sbjct: 136 MGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDD 195
Query: 61 LESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
LESLGYVLMYF RGSLPWQGLKA TK+QKYE+ISEKK++T IE LC+GYP E
Sbjct: 196 LESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEF 248
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 169 bits (429), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 89/109 (81%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESL 64
K N++Y++DFG+ K YR+ T QHI YRE KNL+GTARY SINTHLG EQSRRDDLE+L
Sbjct: 144 KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEAL 203
Query: 65 GYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
G+V MYF RGSLPWQGLKAAT +QKYERI EKK STP+ ELC G+P E
Sbjct: 204 GHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEF 252
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 169 bits (429), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 89/109 (81%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESL 64
K N++Y++DFG+ K YR+ T QHI YRE KNL+GTARY SINTHLG EQSRRDDLE+L
Sbjct: 145 KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEAL 204
Query: 65 GYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
G+V MYF RGSLPWQGLKAAT +QKYERI EKK STP+ ELC G+P E
Sbjct: 205 GHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEF 253
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 150 bits (379), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 94/115 (81%), Gaps = 4/115 (3%)
Query: 3 LGKRGN----LVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRR 58
+G++GN +++IIDFGLAK+Y + T +HI YRE+K+LTGTARY SINTHLG EQSRR
Sbjct: 130 IGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 189
Query: 59 DDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
DDLE+LG++ MYF RGSLPWQGLKA T +++Y++I + K +TPIE LC+ +P E+
Sbjct: 190 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCENFPEEM 244
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 150 bits (379), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 90/109 (82%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESL 64
KR + ++IIDFGLAK+Y + T +HI YRE+K+LTGTARY SINTHLG EQSRRDDLE+L
Sbjct: 139 KRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL 198
Query: 65 GYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
G++ MYF RGSLPWQGLKA T +++Y++I + K +TPIE LC+ +P E+
Sbjct: 199 GHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEM 247
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 147 bits (372), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 91/112 (81%), Gaps = 4/112 (3%)
Query: 3 LGKRGN----LVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRR 58
+G+ GN +++IIDFGLAK+Y + T +HI YRE+K+LTGTARY SINTHLG EQSRR
Sbjct: 138 IGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 197
Query: 59 DDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYP 110
DDLE+LG++ MYF RGSLPWQGLKA T +++Y++I + K +TPIE LC+ +P
Sbjct: 198 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP 249
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 146 bits (368), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 90/112 (80%), Gaps = 4/112 (3%)
Query: 3 LGKRGN----LVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRR 58
+G+ GN +++IIDF LAK+Y + T +HI YRE+K+LTGTARY SINTHLG EQSRR
Sbjct: 159 IGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 218
Query: 59 DDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYP 110
DDLE+LG++ MYF RGSLPWQGLKA T +++Y++I + K +TPIE LC+ +P
Sbjct: 219 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP 270
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 146 bits (368), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 90/112 (80%), Gaps = 4/112 (3%)
Query: 3 LGKRGN----LVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRR 58
+G+ GN +++IIDF LAK+Y + T +HI YRE+K+LTGTARY SINTHLG EQSRR
Sbjct: 138 IGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 197
Query: 59 DDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYP 110
DDLE+LG++ MYF RGSLPWQGLKA T +++Y++I + K +TPIE LC+ +P
Sbjct: 198 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP 249
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESL 64
K + VY++D+GLA +Y H+ A + GT + SI+ H G+ SRR DLE L
Sbjct: 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEIL 247
Query: 65 GYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELC-KGYPG 111
GY ++ + G LPW+ K KY R S+ + I L K +P
Sbjct: 248 GYCMIQWLTGHLPWED---NLKDPKYVRDSKIRYRENIASLMDKCFPA 292
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESL 64
K + VY++D+GLA +Y H+ + GT + SI+ H G+ SRR DLE L
Sbjct: 188 KNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEIL 247
Query: 65 GYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEEL---C---KGYPGEL 113
GY ++ + G LPW+ K KY R S+ + I L C K PGE+
Sbjct: 248 GYCMIQWLTGHLPWED---NLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEI 299
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESL 64
K + VY++D+GLA +Y H+ + GT + SI+ H G+ SRR DLE L
Sbjct: 188 KNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEIL 247
Query: 65 GYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEEL---C---KGYPGEL 113
GY ++ + G LPW+ K KY R S+ + I L C K PGE+
Sbjct: 248 GYCMIQWLTGHLPWED---NLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEI 299
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESL 64
K + VY+ D+GL+ +Y H+ K GT + S++ H G+ SRR D+E L
Sbjct: 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEIL 246
Query: 65 GYVLMYFNRGSLPW-QGLKAATKRQ 88
GY ++ + G LPW Q LK Q
Sbjct: 247 GYCMLRWLCGKLPWEQNLKDPVAVQ 271
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNL--TGTARYASINTHLGIEQSRRDDLESLGYV 67
V + +G A +R + +H+AY E G + S++ H G SRR DL+SLGY
Sbjct: 200 VTLAGYGFA--FRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYC 257
Query: 68 LMYFNRGSLPW 78
++ + G LPW
Sbjct: 258 MLKWLYGFLPW 268
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 67
N V ++DFG+A+ + + + + GTA+Y S G R D+ SLG V
Sbjct: 153 NAVKVVDFGIARAIADSGN----SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 68 LMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGELD 114
L G P+ G + Y+ + E + P +G +LD
Sbjct: 209 LYEVLTGEPPFTGDSPVSV--AYQHVREDPI--PPSARHEGLSADLD 251
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 67
N V ++DFG+A+ + + + + GTA+Y S G R D+ SLG V
Sbjct: 170 NAVKVMDFGIARAIADSGN----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 68 LMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGELD 114
L G P+ G + Y+ + E + P +G +LD
Sbjct: 226 LYEVLTGEPPFTGDSPVSV--AYQHVREDPI--PPSARHEGLSADLD 268
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 67
N V ++DFG+A+ + + + + GTA+Y S G R D+ SLG V
Sbjct: 153 NAVKVMDFGIARAIADSGN----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 68 LMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGELD 114
L G P+ G + Y+ + E + P +G +LD
Sbjct: 209 LYEVLTGEPPFTGDSPVSV--AYQHVREDPI--PPSARHEGLSADLD 251
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 67
N V ++DFG+A+ + + + + GTA+Y S G R D+ SLG V
Sbjct: 153 NAVKVMDFGIARAIADSGN----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 68 LMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGELD 114
L G P+ G + Y+ + E + P +G +LD
Sbjct: 209 LYEVLTGEPPFTGDSPVSV--AYQHVREDPI--PPSARHEGLSADLD 251
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 67
N V ++DFG+A+ + + + + GTA+Y S G R D+ SLG V
Sbjct: 153 NAVKVMDFGIARAIADSGN----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 68 LMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGELD 114
L G P+ G + Y+ + E + P +G +LD
Sbjct: 209 LYEVLTGEPPFTGDSPVSV--AYQHVREDPI--PPSARHEGLSADLD 251
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 67
N V ++DFG+A+ + + + + GTA+Y S G R D+ SLG V
Sbjct: 153 NAVKVMDFGIARAIADSGN----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 68 LMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGELD 114
L G P+ G + Y+ + E + P +G +LD
Sbjct: 209 LYEVLTGEPPFTG--DSPDSVAYQHVREDPI--PPSARHEGLSADLD 251
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 19/85 (22%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-----DLESL 64
+ IIDFGLA+ ++ + +H + N GTA Y + E +RD D+ S
Sbjct: 166 IKIIDFGLAELFK---SDEH-----STNAAGTALY------MAPEVFKRDVTFKCDIWSA 211
Query: 65 GYVLMYFNRGSLPWQGLKAATKRQK 89
G V+ + G LP+ G +QK
Sbjct: 212 GVVMYFLLTGCLPFTGTSLEEVQQK 236
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYF 71
I DFG+AK E Q ++ GT +Y S G D+ S+G VL
Sbjct: 152 IFDFGIAKALSETSLTQ------TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205
Query: 72 NRGSLPWQGLKAATKRQKYERISEKKMSTPI 102
G P+ G A + K+ + S ++T +
Sbjct: 206 LVGEPPFNGETAVSIAIKHIQDSVPNVTTDV 236
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 10/99 (10%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 67
+ Y++DFG+A + + Q N GT Y + + R D+ +L V
Sbjct: 171 DFAYLVDFGIASATTDEKLTQL------GNTVGTLYYXAPERFSESHATYRADIYALTCV 224
Query: 68 LMYFNRGSLPWQG----LKAATKRQKYERISEKKMSTPI 102
L GS P+QG + A Q R S + P+
Sbjct: 225 LYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPV 263
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 28.5 bits (62), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 28.5 bits (62), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 156 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 203
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 204 VITYILLSGASPFLG---DTKQETLANVS 229
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ +IDFG+A K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 158 IKLIDFGIAHKIEAG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 205
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ IS
Sbjct: 206 VITYILLSGASPFLG---ETKQETLTNIS 231
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 156 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 203
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 204 VITYILLSGASPFLG---DTKQETLANVS 229
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ +IDFG+A K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 172 IKLIDFGIAHKIEAG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 219
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ IS
Sbjct: 220 VITYILLSGASPFLG---ETKQETLTNIS 245
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ +IDFG+A K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 151 IKLIDFGIAHKIEAG--------NEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 198
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ IS
Sbjct: 199 VITYILLSGASPFLG---ETKQETLTNIS 224
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ IIDFGLA K G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 157 IKIIDFGLAHKIDFG--------NEFKNIFGTPAFVAPEIVNYEPLGLEA----DMWSIG 204
Query: 66 YVLMYFNRGSLPWQGLKAATKRQKYERIS 94
+ G+ P+ G TK++ +S
Sbjct: 205 VITYILLSGASPFLG---DTKQETLANVS 230
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ +IDFGLA + +G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 158 IKLIDFGLAHEIEDG--------VEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 205
Query: 66 YVLMYFNRGSLPWQG 80
+ G+ P+ G
Sbjct: 206 VITYILLSGASPFLG 220
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ +IDFGLA + +G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 158 IKLIDFGLAHEIEDG--------VEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 205
Query: 66 YVLMYFNRGSLPWQG 80
+ G+ P+ G
Sbjct: 206 VITYILLSGASPFLG 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ +IDFGLA + +G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 158 IKLIDFGLAHEIEDG--------VEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 205
Query: 66 YVLMYFNRGSLPWQG 80
+ G+ P+ G
Sbjct: 206 VITYILLSGASPFLG 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ +IDFGLA + +G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 158 IKLIDFGLAHEIEDG--------VEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 205
Query: 66 YVLMYFNRGSLPWQG 80
+ G+ P+ G
Sbjct: 206 VITYILLSGASPFLG 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 16/75 (21%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTH-LGIEQSRRDDLESLG 65
+ +IDFGLA + +G E KN+ GT + + +N LG+E D+ S+G
Sbjct: 158 IKLIDFGLAHEIEDG--------VEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIG 205
Query: 66 YVLMYFNRGSLPWQG 80
+ G+ P+ G
Sbjct: 206 VITYILLSGASPFLG 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-DLESLGYVL 68
+ I DFG + ++ G G+ YA+ G + + D+ SLG +L
Sbjct: 152 IKIADFGFSNEFTFGNKLD--------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 69 MYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEELCKGY 109
GSLP+ G L+ R KY RI MST E L K +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIP-FYMSTDCENLLKKF 247
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-DLESLGYVL 68
+ I DFG + ++ G G+ YA+ G + + D+ SLG +L
Sbjct: 145 IKIADFGFSNEFTFGNKLD--------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 196
Query: 69 MYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEELCKGY 109
GSLP+ G L+ R KY RI MST E L K +
Sbjct: 197 YTLVSGSLPFDGQNLKELRERVLRGKY-RIP-FYMSTDCENLLKKF 240
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-DLESLGYVL 68
+ I DFG + ++ G G+ YA+ G + + D+ SLG +L
Sbjct: 152 IKIADFGFSNEFTFGNKLD--------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 69 MYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEELCKGY 109
GSLP+ G L+ R KY RI MST E L K +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIP-FYMSTDCENLLKKF 247
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-DLESLGYVL 68
+ I DFG + ++ G G+ YA+ G + + D+ SLG +L
Sbjct: 152 IKIADFGFSNEFTFGNKLD--------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 69 MYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEELCKGY 109
GSLP+ G L+ R KY RI MST E L K +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIP-FYMSTDCENLLKKF 247
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-DLESLGYVL 68
+ I DFG + ++ G G+ YA+ G + + D+ SLG +L
Sbjct: 152 IKIADFGFSNEFTFGNKLDEFC--------GSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 69 MYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEELCKGY 109
GSLP+ G L+ R KY RI MST E L K +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIP-FYMSTDCENLLKKF 247
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 69
+ I D GLA EG+T K GT Y + + D +LG +L
Sbjct: 325 IRISDLGLAVHVPEGQTI--------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376
Query: 70 YFNRGSLPWQGLKAATKRQKYERI 93
G P+Q K KR++ ER+
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVERL 400
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 69
+ I D GLA EG+T K GT Y + + D +LG +L
Sbjct: 325 IRISDLGLAVHVPEGQTI--------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376
Query: 70 YFNRGSLPWQGLKAATKRQKYERI 93
G P+Q K KR++ ER+
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVERL 400
>pdb|4ABN|A Chain A, Crystal Structure Of Full Length Mouse Strap (Ttc5)
pdb|4ABN|B Chain B, Crystal Structure Of Full Length Mouse Strap (Ttc5)
Length = 474
Score = 26.2 bits (56), Expect = 5.5, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 35 NKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERIS 94
++++ + R A + + + R + Y+ +YFN G P +A + + E++
Sbjct: 192 SRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVD 251
Query: 95 EKKMSTP 101
K S P
Sbjct: 252 RKASSNP 258
>pdb|3BPQ|A Chain A, Crystal Structure Of Relb-Rele Antitoxin-Toxin Complex
From Methanococcus Jannaschii
pdb|3BPQ|C Chain C, Crystal Structure Of Relb-Rele Antitoxin-Toxin Complex
From Methanococcus Jannaschii
Length = 52
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTG 40
I+D GLAK E + + + Y E K L G
Sbjct: 23 ILDIGLAKAMEETKDDELLTYDEIKELLG 51
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 16/106 (15%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-DLESLGYVL 68
+ I DFG + ++ G G YA+ G + + D+ SLG +L
Sbjct: 152 IKIADFGFSNEFTFGNKLDAFC--------GAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 69 MYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEELCKGY 109
GSLP+ G L+ R KY RI MST E L K +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERVLRGKY-RIP-FYMSTDCENLLKKF 247
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 16/106 (15%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-DLESLGYVL 68
+ I DFG + ++ G G+ YA+ G + + D+ SLG +L
Sbjct: 150 IKIADFGFSNEFTVGGKLD--------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
Query: 69 MYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEELCKGY 109
GSLP+ G L+ R KY RI MST E L K +
Sbjct: 202 YTLVSGSLPFDGQNLKELRERVLRGKY-RIP-FYMSTDCENLLKRF 245
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHI-----AYRENKNLTGTARYASINTHLGIEQSRRDDLE 62
++V + DFGL + Q + AY + GT Y S G S + D+
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIF 260
Query: 63 SLGYVLM 69
SLG +L
Sbjct: 261 SLGLILF 267
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRD-DLESLGYVL 68
+ I DFG + ++ G G+ YA+ G + + D+ SLG +L
Sbjct: 153 IKIADFGFSNEFTVGNKLD--------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 69 MYFNRGSLPWQGLKAATKRQKYER 92
GSLP+ G R++ R
Sbjct: 205 YTLVSGSLPFDGQNLKELRERVLR 228
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHI-----AYRENKNLTGTARYASINTHLGIEQSRRDDLE 62
++V + DFGL + Q + AY + GT Y S G S + D+
Sbjct: 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIF 214
Query: 63 SLGYVLM 69
SLG +L
Sbjct: 215 SLGLILF 221
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 60 DLESLGYVLMYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEELCKGY 109
D+ SLG +L GSLP+ G L+ R KY RI MST E L K +
Sbjct: 196 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIP-FYMSTDCENLLKRF 248
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,553,944
Number of Sequences: 62578
Number of extensions: 126826
Number of successful extensions: 354
Number of sequences better than 100.0: 65
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 330
Number of HSP's gapped (non-prelim): 65
length of query: 115
length of database: 14,973,337
effective HSP length: 78
effective length of query: 37
effective length of database: 10,092,253
effective search space: 373413361
effective search space used: 373413361
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)