RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14894
(115 letters)
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 220 bits (562), Expect = 1e-73
Identities = 67/112 (59%), Positives = 88/112 (78%), Gaps = 2/112 (1%)
Query: 1 MGLG--KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRR 58
+G K +++IIDF LAK+Y + T +HI YRE+K+LTGTARY SINTHLG EQSRR
Sbjct: 138 IGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR 197
Query: 59 DDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYP 110
DDLE+LG++ MYF RGSLPWQGLKA T +++Y++I + K +TPIE LC+ +P
Sbjct: 198 DDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP 249
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 217 bits (554), Expect = 1e-72
Identities = 78/115 (67%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
Query: 1 MGL--GKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRR 58
+G K N++Y++DFG+ K YR+ T QHI YRE KNL+GTARY SINTHLG EQSRR
Sbjct: 139 IGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRR 198
Query: 59 DDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
DDLE+LG+V MYF RGSLPWQGLKAAT +QKYERI EKK STP+ ELC G+P E
Sbjct: 199 DDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEF 253
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 216 bits (553), Expect = 2e-72
Identities = 105/113 (92%), Positives = 107/113 (94%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDD 60
MGLGK+GNLVYIIDFGLAKKYR+ RTHQHI YRENKNLTGTARYASINTHLGIEQSRRDD
Sbjct: 138 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD 197
Query: 61 LESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
LESLGYVLMYFN GSLPWQGLKAATKRQKYERISEKKMSTPIE LCKGYP E
Sbjct: 198 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEF 250
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 215 bits (549), Expect = 6e-70
Identities = 94/113 (83%), Positives = 102/113 (90%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDD 60
MGLG+R N VYIIDFGLAKKYR+ THQHI YRENKNLTGTARYAS+NTHLGIEQSRRDD
Sbjct: 136 MGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDD 195
Query: 61 LESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
LESLGYVLMYF RGSLPWQGLKA TK+QKYE+ISEKK++T IE LC+GYP E
Sbjct: 196 LESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEF 248
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 200 bits (511), Expect = 2e-65
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDD 60
+ + VY++D+GLA +Y H+ A + GT + SI+ H G+ SRR D
Sbjct: 185 LNYKN-PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGD 243
Query: 61 LESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELC---KGYPGEL 113
LE LGY ++ + G LPW+ K + +I ++ + + C PGE+
Sbjct: 244 LEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEI 299
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 198 bits (506), Expect = 7e-65
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDD 60
+G + VY+ D+GL+ +Y H+ K GT + S++ H G+ SRR D
Sbjct: 184 LGYKNP-DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSD 242
Query: 61 LESLGYVLMYFNRGSLPWQGL---KAATKRQKYERISEKKMSTPIEELCKGYPGEL 113
+E LGY ++ + G LPW+ A + K + E S E+
Sbjct: 243 VEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEI 298
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 191 bits (486), Expect = 1e-61
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 1 MGLGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKN--LTGTARYASINTHLGIEQSRR 58
+ + + V + +G A +Y + +H+AY E G + S++ H G SRR
Sbjct: 192 VDPEDQ-SQVTLAGYGFAFRYC--PSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRR 248
Query: 59 DDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGELDE 115
DL+SLGY ++ + G LPW T+ ++ P C + +
Sbjct: 249 SDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSET 305
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 35.9 bits (83), Expect = 0.001
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 24/107 (22%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS-----------INTHLGIEQSRRDD 60
+IDFG+A + + T + G Y N + S + D
Sbjct: 195 LIDFGIANQMQPDTTSVVK-----DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSD 249
Query: 61 LESLG---YVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEE 104
+ SLG Y + Y G P+Q + K I + +
Sbjct: 250 VWSLGCILYYMTY---GKTPFQQIINQI--SKLHAIIDPNHEIEFPD 291
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 35.8 bits (83), Expect = 0.001
Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 24/107 (22%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS-----------INTHLGIEQSRRDD 60
+IDFG+A + + T + GT Y N + S + D
Sbjct: 148 LIDFGIANQMQPDTTSVVK-----DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 202
Query: 61 LESLG---YVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEE 104
+ SLG Y + Y G P+Q + + K I + +
Sbjct: 203 VWSLGCILYYMTY---GKTPFQQII--NQISKLHAIIDPNHEIEFPD 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 34.7 bits (80), Expect = 0.004
Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 13/100 (13%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTHLGIEQSRRDDLESLGY 66
I DFGL KK GR ++ + GT + + ++ + D+ S G
Sbjct: 162 AMISDFGLCKKLAVGRH----SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG- 216
Query: 67 VLMYF--NRGSLPWQGLKAATKRQKYERISEKKMSTPIEE 104
+ Y+ + GS P+ +RQ + + E
Sbjct: 217 CVFYYVISEGSHPFGKS---LQRQANILLGACSLDCLHPE 253
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 34.2 bits (79), Expect = 0.005
Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 24/107 (22%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS-----------INTHLGIEQSRRDD 60
+IDFG+A + + T + GT Y N + S + D
Sbjct: 167 LIDFGIANQMQPDTTSVVK-----DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSD 221
Query: 61 LESLG---YVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEE 104
+ SLG Y + Y G P+Q + + K I + +
Sbjct: 222 VWSLGCILYYMTY---GKTPFQQI--INQISKLHAIIDPNHEIEFPD 263
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 33.7 bits (77), Expect = 0.006
Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 9/74 (12%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAY-RENKNLTGTARY-------ASINTHLGIE 54
+ G V I DFGL+ + R + + GT RY ++N
Sbjct: 153 VKNDGTCV-ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXES 211
Query: 55 QSRRDDLESLGYVL 68
++ D+ +LG +
Sbjct: 212 ALKQVDMYALGLIY 225
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 33.4 bits (77), Expect = 0.008
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 13/96 (13%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTHLGIEQSRRDDLESLGY 66
V+I DF +A + GT Y + ++ G S D SLG
Sbjct: 154 VHITDFNIAAMLPRETQI--------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLG- 204
Query: 67 VLMY-FNRGSLPWQGLKAATKRQKYERISEKKMSTP 101
V Y RG P+ + + ++ ++ P
Sbjct: 205 VTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP 240
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 32.6 bits (75), Expect = 0.015
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS--INTHLGIEQSRRD---DLESLGY 66
I DF L + I+ E G+A Y + + E S D DL SLG
Sbjct: 155 ICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG- 213
Query: 67 VLMY 70
V++Y
Sbjct: 214 VILY 217
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 31.7 bits (72), Expect = 0.033
Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 23/115 (20%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTHLGIEQSRRD-----DLES 63
+ DFG A++ + +L GT Y + + ++ DL S
Sbjct: 157 LTDFGAARELEDDEQF--------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWS 208
Query: 64 LG---YVLMYFNRGSLPWQGLKAATKRQK-YERISEKKMSTPIEELCKGYPGELD 114
+G Y GSLP++ + + ++ +I K S I + K G +D
Sbjct: 209 IGVTFYHAAT---GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID 260
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 31.9 bits (72), Expect = 0.033
Identities = 15/102 (14%), Positives = 28/102 (27%), Gaps = 16/102 (15%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS--INTHLGIEQSRRDD 60
+ G + + D K + YA + +
Sbjct: 227 IMPDGR-LMLGDVSALWKVGTRGP----------ASSVPVTYAPREFLNASTATFTHALN 275
Query: 61 LESLGYVLMY-FNRGSLPWQGLKAATKRQKYERISEKKMSTP 101
LG + +Y LP+ GL + ++R S + T
Sbjct: 276 AWQLG-LSIYRVWCLFLPF-GLVTPGIKGSWKRPSLRVPGTD 315
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 31.2 bits (71), Expect = 0.042
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTHLGIEQ--SRRDDLESLGY 66
I DFGLA K+ G++ + GT RY + + + ++ R D+ ++G
Sbjct: 172 IADFGLALKFEAGKSAG-----DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGL 226
Query: 67 VL 68
VL
Sbjct: 227 VL 228
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 31.4 bits (71), Expect = 0.045
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 24/124 (19%)
Query: 4 GKRGNLVY-IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTHLGIEQSRRD 59
G+ G VY + DFG A++ + +L GT Y + + ++
Sbjct: 148 GEDGQSVYKLTDFGAARELEDDEQF--------VSLYGTEEYLHPDMYERAVLRKDHQKK 199
Query: 60 -----DLESLG---YVLMYFNRGSLPWQGLKAATKRQK-YERISEKKMSTPIEELCKGYP 110
DL S+G Y GSLP++ + + ++ +I K S I + K
Sbjct: 200 YGATVDLWSIGVTFYHAAT---GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN 256
Query: 111 GELD 114
G +D
Sbjct: 257 GPID 260
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 31.4 bits (71), Expect = 0.047
Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 22/109 (20%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTHLGIEQSRRDDLESLGY 66
V I D GLA + + + H GT Y + + + + S D SLG
Sbjct: 331 VRISDLGLACDFSKKKPH---------ASVGTHGYMAPEVLQKGVAYDSSA--DWFSLG- 378
Query: 67 VLMY-FNRGSLPWQGLKAATKRQKYERISEKK------MSTPIEELCKG 108
+++ RG P++ K K + S + L +G
Sbjct: 379 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 31.3 bits (71), Expect = 0.048
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 13/75 (17%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYA-------SINTHLGIEQSRRDDLESL 64
I DFGL KK G++ N +GT+ + S N +R D+ S+
Sbjct: 169 ISDFGLCKKLDSGQSSFR---TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSM 225
Query: 65 GYVLMYF--NRGSLP 77
G + Y+ ++G P
Sbjct: 226 G-CVFYYILSKGKHP 239
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 31.2 bits (71), Expect = 0.053
Identities = 11/33 (33%), Positives = 12/33 (36%), Gaps = 3/33 (9%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
I D GLA K+ I GT RY
Sbjct: 183 IADLGLAVKFISDTNEVDIP---PNTRVGTKRY 212
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 31.2 bits (71), Expect = 0.057
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY-------ASINTHLGIEQSRRDDLESL 64
I D GLA ++ IA + GT RY SIN E +R D+ ++
Sbjct: 149 IADLGLAVRHDSATDTIDIA---PNHRVGTKRYMAPEVLDDSINMK-HFESFKRADIYAM 204
Query: 65 GYVL 68
G V
Sbjct: 205 GLVF 208
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 31.0 bits (70), Expect = 0.064
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS 46
KR N + +IDFGL ++ K TGTA +A+
Sbjct: 291 KRSNELKLIDFGLTAHLDPKQSV--------KVTTGTAEFAA 324
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 30.9 bits (70), Expect = 0.065
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARY-------ASINTHLGIEQ 55
L K+ I D GLA ++ IA + GT RY SIN E
Sbjct: 179 LVKKNGTCCIADLGLAVRHDSATDTIDIA---PNHRVGTKRYMAPEVLDDSINMK-HFES 234
Query: 56 SRRDDLESLGYVL 68
+R D+ ++G V
Sbjct: 235 FKRADIYAMGLVF 247
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 30.7 bits (70), Expect = 0.068
Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 8/42 (19%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS 46
+R + + II+FG A++ + G + L Y +
Sbjct: 138 RRSSTIKIIEFGQARQLKPGDNF--------RLLFTAPEYYA 171
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 30.4 bits (69), Expect = 0.10
Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
I D GLA + + + N GT RY
Sbjct: 154 IADLGLAVMHSQSTNQLDVG---NNPRVGTKRY 183
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 30.0 bits (67), Expect = 0.12
Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 25/117 (21%)
Query: 3 LGKRGNLVYIIDFGLAKKY-REGRTHQHIAYRENKNLTGTARYAS-----INTHLGIEQS 56
L +RG V++ F + + + + H +
Sbjct: 244 LDQRGG-VFLTGFEHLVRDGASAVSPIGRGF-------APPETTAERMLPFGQHHPTLMT 295
Query: 57 RRDDLESLG---YVLMYFNRGSLPWQGLKAATKRQKYERI--SEKKMSTPIEELCKG 108
D +LG Y + LP E I S K + P+ L +G
Sbjct: 296 FAFDTWTLGLAIYWIWC---ADLPNTD---DAALGGSEWIFRSCKNIPQPVRALLEG 346
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 30.0 bits (67), Expect = 0.13
Identities = 19/122 (15%), Positives = 33/122 (27%), Gaps = 34/122 (27%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYA-----------SINTHL 51
L +RG V++ F + + + + S +
Sbjct: 239 LDQRGG-VFLTGFEHLVRDGARVV-----------SSVSRGFEPPELEARRATISYHRDR 286
Query: 52 GIEQSRRDDLESLG---YVLMYFNRGSLPWQGLKAATKRQKYERI--SEKKMSTPIEELC 106
+ D +LG Y + LP E I S K + P+ L
Sbjct: 287 RTLMTFSFDAWALGLVIYWIWC---ADLPITK---DAALGGSEWIFRSCKNIPQPVRALL 340
Query: 107 KG 108
+G
Sbjct: 341 EG 342
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside
hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Length = 437
Score = 30.1 bits (67), Expect = 0.15
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 59 DDLESLGYVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYP 110
DD +SL L+ N L +G+ T K + + + + YP
Sbjct: 42 DDEQSLVRQLVMANEYDL--EGIITTTGCWKKSTSNTAYVDRILNAYSQAYP 91
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 29.7 bits (67), Expect = 0.15
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS 46
K+ + V IIDFGLA K K T TA +A+
Sbjct: 185 KKASSVKIIDFGLATKLNPDEIV--------KVTTATAEFAA 218
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 29.1 bits (66), Expect = 0.23
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
I+DFG+++K + + GT Y
Sbjct: 175 IVDFGMSRKIGHACEL--------REIMGTPEY 199
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 29.1 bits (66), Expect = 0.23
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
IIDFGLA K G KN+ GT +
Sbjct: 159 IIDFGLAHKIDFGNEF--------KNIFGTPEF 183
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 29.1 bits (66), Expect = 0.25
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
+IDFG+A K G KN+ GT +
Sbjct: 153 LIDFGIAHKIEAGNEF--------KNIFGTPEF 177
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 29.1 bits (66), Expect = 0.25
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 8/35 (22%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS 46
IIDFGLA+ ++ + A GTA Y +
Sbjct: 168 IIDFGLAELFKSDEHSTNAA--------GTALYMA 194
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 29.3 bits (66), Expect = 0.26
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 8/40 (20%)
Query: 5 KRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
+ + IIDFGLA++Y+ K GT +
Sbjct: 223 RDAKQIKIIDFGLARRYKPREKL--------KVNFGTPEF 254
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 29.1 bits (66), Expect = 0.28
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
+IDFGLA + +G KN+ GT +
Sbjct: 160 LIDFGLAHEIEDGVEF--------KNIFGTPEF 184
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 28.9 bits (65), Expect = 0.31
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
+IDFGLA + +G KN+ GT +
Sbjct: 160 LIDFGLAHEIEDGVEF--------KNIFGTPEF 184
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.1 bits (64), Expect = 0.35
Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 28/93 (30%)
Query: 16 GLAKKYREGRTHQHIAYRENKNLTGTARYASINTHL-GIEQSRRDDLESLGYVLMYF--- 71
L Y + + HI + HL IE R L + ++ F
Sbjct: 463 DLIPPYLDQYFYSHIGH-----------------HLKNIEHPERMTLFRMVFLDFRFLEQ 505
Query: 72 --NRGSLPWQG----LKAATKRQKYER-ISEKK 97
S W L + + Y+ I +
Sbjct: 506 KIRHDSTAWNASGSILNTLQQLKFYKPYICDND 538
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 28.3 bits (64), Expect = 0.46
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 8/35 (22%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS 46
+IDFGLA +++ G+ + GT Y S
Sbjct: 150 LIDFGLAARFKPGKMMRTKV--------GTPYYVS 176
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 28.1 bits (63), Expect = 0.62
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
IIDFGL+ +++ + GTA Y
Sbjct: 165 IIDFGLSTCFQQNTKMKDRI--------GTAYY 189
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 28.1 bits (63), Expect = 0.64
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 22/84 (26%)
Query: 3 LGKRGNLVYIIDFGLAKKY----REGRTHQHIAYRENKNLT---GTARYAS--INTHLGI 53
+ + N V I DFGLAK + + NLT GTA Y + + +
Sbjct: 149 IDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV-----L 202
Query: 54 EQSRRDDLE----SLG---YVLMY 70
+ + + + SLG + ++Y
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMIY 226
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 27.9 bits (62), Expect = 0.75
Identities = 7/35 (20%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS 46
++DFGL+K++ + ++ GT + +
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTT---KAGTPYFVA 242
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 27.6 bits (62), Expect = 0.79
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 8/35 (22%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
+ IIDFGL+ +++ + GTA Y
Sbjct: 163 IKIIDFGLSTCFQQNTKMKDRI--------GTAYY 189
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 27.6 bits (62), Expect = 0.81
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 18/77 (23%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSR------RDDLES 63
Y++DFG+A + + Q N GT Y + E+ R D+ +
Sbjct: 173 AYLVDFGIASATTDEKLTQ------LGNTVGTLYYMA------PERFSESHATYRADIYA 220
Query: 64 LGYVLMYFNRGSLPWQG 80
L VL GS P+QG
Sbjct: 221 LTCVLYECLTGSPPYQG 237
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 27.7 bits (62), Expect = 0.90
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
IIDFGL+ + + + GTA Y
Sbjct: 170 IIDFGLSTHFEASKKMKDKI--------GTAYY 194
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 27.6 bits (62), Expect = 1.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 14 DFGLAKKYREGRTH 27
DFGLAK TH
Sbjct: 177 DFGLAKLMDYKDTH 190
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 27.4 bits (61), Expect = 1.0
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
I+DFGL+ + + + GTA Y
Sbjct: 180 IVDFGLSAVFENQKKMKERL--------GTAYY 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 27.4 bits (61), Expect = 1.3
Identities = 4/13 (30%), Positives = 6/13 (46%)
Query: 12 IIDFGLAKKYREG 24
+ DFG + G
Sbjct: 241 LSDFGFSCHLEPG 253
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 27.4 bits (61), Expect = 1.3
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
I+DFGL+ + + + GTA Y
Sbjct: 190 IVDFGLSSFFSKDYKLRDRL--------GTAYY 214
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 27.3 bits (60), Expect = 1.5
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 14/57 (24%)
Query: 11 YIIDFGLAKKYREGR-THQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGY 66
+I+DFG G TH+ NK+ TG R T ++ + DD G+
Sbjct: 500 HILDFGPGGASGLGVLTHR------NKDGTG-VRVIVAGT---LDINPDDD---YGF 543
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 27.0 bits (60), Expect = 1.5
Identities = 20/118 (16%), Positives = 42/118 (35%), Gaps = 20/118 (16%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS--INTHLGIEQSRRDD 60
+ K G + + DFG ++ + + GT + ++ + D
Sbjct: 185 MDKNGRVK-LSDFGESEYMVDKKIK---------GSRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 61 LESLG---YVLMYFNRGSLPWQGLKAATKRQKYERISEKKMSTPIEELCKGYPGELDE 115
+ SLG YV+ Y +P+ + + + I K + P++ YP +
Sbjct: 235 IWSLGICLYVMFY---NVVPFSL--KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK 287
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 26.8 bits (60), Expect = 1.6
Identities = 4/13 (30%), Positives = 7/13 (53%)
Query: 12 IIDFGLAKKYREG 24
+ DFG + + G
Sbjct: 165 LTDFGFSCQLDPG 177
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 26.9 bits (60), Expect = 1.6
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 12 IIDFGLAKKYREG 24
I DFG +K E
Sbjct: 158 ITDFGHSKILGET 170
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 26.8 bits (60), Expect = 1.6
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 8/35 (22%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS 46
+ DFGLA + + GT Y S
Sbjct: 149 LADFGLAIEVNDSEAW--------HGFAGTPGYLS 175
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 27.1 bits (60), Expect = 1.6
Identities = 11/64 (17%), Positives = 18/64 (28%), Gaps = 22/64 (34%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSR-----RDDLESL 64
+ +ID G R GT + + E R D+ ++
Sbjct: 220 LKLIDLGAVS--RINSFGYLY---------GTPGFQA------PEIVRTGPTVATDIYTV 262
Query: 65 GYVL 68
G L
Sbjct: 263 GRTL 266
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 26.6 bits (59), Expect = 1.7
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGT 41
L G+ + DFG A + + + + GT
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTG--DYIPGT 219
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 26.4 bits (59), Expect = 1.9
Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 15/100 (15%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLE 62
+G +G L I DFG + R + GT Y G + DL
Sbjct: 147 MGYKGELK-IADFGWSVHAPSLRRR---------TMCGTLDYLPPEMIEGKTHDEKVDLW 196
Query: 63 SLGYVLMY-FNRGSLPWQGLKAATKRQKYERISEKKMSTP 101
G VL Y F G P+ + + + + RI + P
Sbjct: 197 CAG-VLCYEFLVGMPPFD---SPSHTETHRRIVNVDLKFP 232
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 26.6 bits (59), Expect = 2.0
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 12 IIDFGLAKKYREG 24
+ DFG AK+
Sbjct: 205 LTDFGFAKETTSH 217
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 26.5 bits (59), Expect = 2.0
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 12 IIDFGLAKKYREG 24
+ DFGLA + +
Sbjct: 172 LADFGLAIEVNDS 184
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 26.6 bits (58), Expect = 2.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 12 IIDFGLAKKYREG 24
IID G AK+ +G
Sbjct: 165 IIDLGYAKELDQG 177
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 26.5 bits (59), Expect = 2.3
Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 8/33 (24%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
I DFGL+K K + GT Y
Sbjct: 192 IADFGLSKIVEHQVLM--------KTVCGTPGY 216
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 26.3 bits (58), Expect = 2.5
Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 17/107 (15%)
Query: 10 VYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 69
+ I D GLA EG+T K GT Y + + D +LG L+
Sbjct: 325 IRISDLGLAVHVPEGQT--------IKGRVGTVGYMAPEVVKNERYTFSPDWWALG-CLL 375
Query: 70 Y-FNRGSLPWQGLKAATKRQK-YERISE------KKMSTPIEELCKG 108
Y G P+Q K KR++ + E ++ S LC
Sbjct: 376 YEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQ 422
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 26.1 bits (58), Expect = 3.2
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 18/74 (24%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSR----- 57
+ V ++DFG+A+ + + + GTA+Y S EQ+R
Sbjct: 149 ISATNA-VKVMDFGIARAIADSGNSVT----QTAAVIGTAQYLS------PEQARGDSVD 197
Query: 58 -RDDLESLGYVLMY 70
R D+ SLG ++Y
Sbjct: 198 ARSDVYSLG-CVLY 210
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 26.1 bits (58), Expect = 3.3
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 12 IIDFGLAKKYREG 24
+ DFG AK+ +
Sbjct: 172 LTDFGFAKETTQN 184
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 25.8 bits (57), Expect = 3.3
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 12 IIDFGLAKKYREG 24
I DFG +K E
Sbjct: 283 ITDFGHSKILGET 295
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 26.0 bits (58), Expect = 3.3
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 20/74 (27%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSR----- 57
+ + I DFG+AK E Q ++ GT +Y S EQ++
Sbjct: 144 IDSNKT-LKIFDFGIAKALSETSLTQ------TNHVLGTVQYFS------PEQAKGEATD 190
Query: 58 -RDDLESLGYVLMY 70
D+ S+G +++Y
Sbjct: 191 ECTDIYSIG-IVLY 203
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 25.6 bits (57), Expect = 3.6
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRRDDLE 62
LG G L I DFG + R +L GT Y G + DL
Sbjct: 142 LGSAGELK-IADFGWSVHAPSSRRT---------DLCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 63 SLGYVLMY-FNRGSLPWQGLKAATKRQKYERISEKKMSTP 101
SLG VL Y F G P++ A T ++ Y+RIS + + P
Sbjct: 192 SLG-VLCYEFLVGKPPFE---ANTYQETYKRISRVEFTFP 227
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 25.7 bits (57), Expect = 3.7
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 30/84 (35%)
Query: 8 NLVYIIDFGLAKKYREGRTHQHIAYRENKNLT---GTARYAS---INTHL--GIEQSRRD 59
+IDFG A ++ T GT Y+ I+ H +
Sbjct: 177 GCAKLIDFGSG------------ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPA---- 220
Query: 60 DLESLG---YVLMYFNRGSLPWQG 80
+ SLG Y ++ G +P++
Sbjct: 221 TVWSLGILLYDMVC---GDIPFER 241
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 25.8 bits (57), Expect = 3.9
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 30/91 (32%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLT---GTARYA-----SINTHLGIE 54
+ + + +IDFG A G K GT Y N + G E
Sbjct: 163 IAEDFT-IKLIDFGSAAYLERG-----------KLFYTFCGTIEYCAPEVLMGNPYRGPE 210
Query: 55 QSRRDDLESLG---YVLMYFNRGSLPWQGLK 82
++ SLG Y L++ P+ L+
Sbjct: 211 L----EMWSLGVTLYTLVF---EENPFCELE 234
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 25.8 bits (57), Expect = 4.3
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 10/42 (23%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARY 44
L G ++ I DFG A + T N G+A +
Sbjct: 138 LVAGGTVLKICDFGTACDIQTHMT----------NNKGSAAW 169
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 25.7 bits (57), Expect = 4.5
Identities = 20/114 (17%), Positives = 47/114 (41%), Gaps = 22/114 (19%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLTGTARYAS---INTHLGIEQSRRD 59
+G+ G+ + I DFG++ +++ N GT + + ++ I +
Sbjct: 170 VGEDGH-IKIADFGVSNEFKGSDALLS-------NTVGTPAFMAPESLSETRKIFSGKAL 221
Query: 60 DLESLG---YVLMYFNRGSLPWQG-----LKAATKRQKYERISEKKMSTPIEEL 105
D+ ++G Y ++ G P+ L + K Q E + ++ +++L
Sbjct: 222 DVWAMGVTLYCFVF---GQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDL 272
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 25.2 bits (56), Expect = 4.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 12 IIDFGLAKKYREG 24
I DFGL+K + G
Sbjct: 150 ITDFGLSKMEQNG 162
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 25.3 bits (56), Expect = 5.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 12 IIDFGLAKKYREG 24
I DFG AK+ R
Sbjct: 161 ICDFGFAKQLRAE 173
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 24.9 bits (55), Expect = 6.2
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 13/38 (34%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLT---GTARYAS 46
IIDFG A+ +N+ L T YA+
Sbjct: 150 IIDFGFARLKPP----------DNQPLKTPCFTLHYAA 177
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 25.0 bits (55), Expect = 7.3
Identities = 10/49 (20%), Positives = 13/49 (26%), Gaps = 6/49 (12%)
Query: 3 LGKRGNLVYIIDFGLAKKYREGRTHQHIAYRENKNLT-----GTARYAS 46
V + DFGL + Q + GT Y S
Sbjct: 151 FTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 24.5 bits (54), Expect = 8.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 12 IIDFGLAKKYREGRTHQH 29
+ID+GLA+ Y G+ +
Sbjct: 172 LIDWGLAEFYHPGQEYNV 189
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 24.8 bits (54), Expect = 9.1
Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 5/40 (12%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLT-----GTARYAS 46
+ DFGL + Q + T GT Y S
Sbjct: 205 VGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 24.5 bits (54), Expect = 9.1
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 19/104 (18%)
Query: 3 LGKRGNLVYIIDFGLAKK----YREGRTHQHIAYRENKNLTGTARYASINTHLGIEQSRR 58
L + ++ I DFG AK ++ R + + GTA+Y S +
Sbjct: 163 LNEDMHIQ-ITDFGTAKVLSPESKQARAN---------SFVGTAQYVSPELLTEKSACKS 212
Query: 59 DDLESLGYVLMY-FNRGSLPWQGLKAATKRQKYERISEKKMSTP 101
DL +LG ++Y G P+ +A + +++I + + P
Sbjct: 213 SDLWALG-CIIYQLVAGLPPF---RAGNEYLIFQKIIKLEYDFP 252
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 24.5 bits (54), Expect = 10.0
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 12 IIDFGLAKKYREGRTHQHIAYRENKNLTG 40
+ DFGLA+ E + +
Sbjct: 153 VCDFGLARIIDESAADNSEPTGQQSGMVE 181
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.136 0.399
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,788,204
Number of extensions: 94243
Number of successful extensions: 328
Number of sequences better than 10.0: 1
Number of HSP's gapped: 326
Number of HSP's successfully gapped: 97
Length of query: 115
Length of database: 6,701,793
Length adjustment: 78
Effective length of query: 37
Effective length of database: 4,523,955
Effective search space: 167386335
Effective search space used: 167386335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (23.5 bits)